Query 014163
Match_columns 429
No_of_seqs 266 out of 2704
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 02:27:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014163.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014163hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02590 probable tyrosine dec 100.0 2.3E-58 4.9E-63 458.3 37.4 399 13-428 85-513 (539)
2 TIGR01788 Glu-decarb-GAD gluta 100.0 2.3E-55 5E-60 429.6 43.3 401 18-425 3-408 (431)
3 COG0076 GadB Glutamate decarbo 100.0 4.3E-54 9.3E-59 421.2 38.3 363 31-409 32-403 (460)
4 PLN02880 tyrosine decarboxylas 100.0 2.1E-54 4.6E-59 430.4 34.6 398 14-428 38-465 (490)
5 PF00282 Pyridoxal_deC: Pyrido 100.0 3.8E-54 8.2E-59 415.3 30.6 348 20-381 1-373 (373)
6 TIGR03799 NOD_PanD_pyr putativ 100.0 3.9E-51 8.5E-56 407.5 36.8 390 24-428 54-506 (522)
7 KOG0628 Aromatic-L-amino-acid/ 100.0 9.6E-49 2.1E-53 363.1 29.8 394 14-428 29-452 (511)
8 KOG1383 Glutamate decarboxylas 100.0 1.5E-47 3.3E-52 356.3 30.9 399 4-425 28-429 (491)
9 TIGR03811 tyr_de_CO2_Ent tyros 100.0 1.6E-45 3.4E-50 369.6 37.9 354 31-400 54-524 (608)
10 PLN02263 serine decarboxylase 100.0 1.1E-44 2.4E-49 351.4 36.1 335 39-426 75-423 (470)
11 PLN03032 serine decarboxylase; 100.0 9.3E-43 2E-47 333.9 36.0 307 71-426 38-356 (374)
12 PRK02769 histidine decarboxyla 100.0 3.1E-42 6.6E-47 333.0 35.0 307 70-427 37-353 (380)
13 KOG0629 Glutamate decarboxylas 100.0 7E-42 1.5E-46 314.0 22.0 397 14-428 58-490 (510)
14 cd06450 DOPA_deC_like DOPA dec 100.0 9.2E-37 2E-41 295.2 28.4 306 71-427 14-328 (345)
15 PRK13520 L-tyrosine decarboxyl 100.0 2.4E-35 5.2E-40 288.2 36.5 349 37-425 2-350 (371)
16 COG0520 csdA Selenocysteine ly 100.0 2.3E-34 4.9E-39 279.3 35.2 326 61-425 27-384 (405)
17 TIGR03812 tyr_de_CO2_Arch tyro 100.0 1.1E-33 2.4E-38 276.6 36.7 349 38-425 1-355 (373)
18 COG1104 NifS Cysteine sulfinat 100.0 1.6E-33 3.4E-38 263.4 33.2 305 64-409 9-323 (386)
19 PLN02651 cysteine desulfurase 100.0 3.9E-30 8.5E-35 250.4 32.9 300 66-408 9-321 (364)
20 COG0436 Aspartate/tyrosine/aro 100.0 3.7E-30 8E-35 250.3 30.3 331 55-427 28-374 (393)
21 TIGR03392 FeS_syn_CsdA cystein 100.0 3.6E-29 7.8E-34 246.7 32.8 320 65-426 25-375 (398)
22 PRK10874 cysteine sulfinate de 100.0 8E-29 1.7E-33 244.5 34.6 319 65-425 28-377 (401)
23 PRK09295 bifunctional cysteine 100.0 4.5E-29 9.8E-34 246.5 30.2 320 65-425 32-383 (406)
24 TIGR01977 am_tr_V_EF2568 cyste 100.0 2.3E-28 5E-33 239.3 34.4 320 68-426 12-359 (376)
25 TIGR03402 FeS_nifS cysteine de 100.0 4.6E-28 1E-32 237.3 34.7 299 67-409 10-318 (379)
26 cd06453 SufS_like Cysteine des 100.0 3.6E-28 7.7E-33 237.7 32.6 320 67-425 10-358 (373)
27 TIGR03235 DNA_S_dndA cysteine 100.0 2.8E-28 6.2E-33 236.5 31.1 303 67-409 9-321 (353)
28 PF00266 Aminotran_5: Aminotra 100.0 1.1E-27 2.3E-32 234.0 33.8 319 67-426 10-361 (371)
29 PRK04366 glycine dehydrogenase 100.0 2.2E-27 4.7E-32 237.8 34.6 358 30-425 44-427 (481)
30 TIGR01979 sufS cysteine desulf 100.0 1.1E-27 2.5E-32 236.5 31.8 323 65-425 27-380 (403)
31 TIGR01976 am_tr_V_VC1184 cyste 100.0 1.9E-27 4.2E-32 234.4 32.7 327 61-426 22-383 (397)
32 TIGR03403 nifS_epsilon cystein 100.0 4.2E-27 9.1E-32 230.7 34.8 301 66-408 9-320 (382)
33 PLN02855 Bifunctional selenocy 100.0 1.8E-27 3.8E-32 236.4 31.7 328 60-425 36-397 (424)
34 TIGR02006 IscS cysteine desulf 100.0 3.9E-27 8.4E-32 232.2 29.8 271 65-369 12-290 (402)
35 PRK00451 glycine dehydrogenase 100.0 1.7E-26 3.6E-31 231.0 32.6 353 23-425 35-427 (447)
36 PLN02409 serine--glyoxylate am 100.0 7.9E-27 1.7E-31 229.5 29.4 313 68-426 20-352 (401)
37 cd06451 AGAT_like Alanine-glyo 100.0 1.2E-26 2.6E-31 225.5 29.3 311 68-425 10-336 (356)
38 PRK02948 cysteine desulfurase; 100.0 7.1E-26 1.5E-30 222.0 34.0 299 67-409 11-320 (381)
39 TIGR00461 gcvP glycine dehydro 100.0 8.8E-26 1.9E-30 234.3 36.1 355 38-427 467-850 (939)
40 TIGR02326 transamin_PhnW 2-ami 100.0 3.8E-26 8.2E-31 222.5 28.3 297 91-425 31-341 (363)
41 cd00613 GDC-P Glycine cleavage 100.0 9.3E-26 2E-30 222.6 31.4 343 41-426 3-384 (398)
42 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 1.3E-25 2.8E-30 220.2 30.9 310 67-424 31-360 (387)
43 PRK05367 glycine dehydrogenase 100.0 2.5E-25 5.3E-30 235.1 34.1 350 37-425 478-854 (954)
44 TIGR03531 selenium_SpcS O-phos 100.0 1E-25 2.2E-30 219.8 28.1 340 25-404 23-386 (444)
45 TIGR01814 kynureninase kynuren 99.9 2.9E-25 6.3E-30 219.2 30.7 310 67-424 38-384 (406)
46 KOG1549 Cysteine desulfurase N 99.9 9.1E-26 2E-30 212.0 24.9 276 60-370 47-332 (428)
47 PRK14012 cysteine desulfurase; 99.9 8.3E-25 1.8E-29 215.9 31.8 268 67-369 14-292 (404)
48 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 8.6E-25 1.9E-29 212.7 30.3 310 67-424 12-341 (361)
49 PLN00145 tyrosine/nicotianamin 99.9 2.7E-24 5.9E-29 213.1 33.1 334 54-426 51-406 (430)
50 PLN00175 aminotransferase fami 99.9 1.8E-24 4E-29 213.5 31.0 329 55-427 54-396 (413)
51 PRK06108 aspartate aminotransf 99.9 1.5E-24 3.3E-29 212.7 28.4 326 57-426 26-364 (382)
52 PRK08361 aspartate aminotransf 99.9 1.7E-24 3.7E-29 212.9 28.4 327 57-427 35-373 (391)
53 PRK13479 2-aminoethylphosphona 99.9 3E-24 6.6E-29 209.5 29.0 311 68-424 16-341 (368)
54 COG0075 Serine-pyruvate aminot 99.9 3.7E-24 8E-29 202.2 28.1 297 89-425 32-342 (383)
55 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 2.7E-24 5.7E-29 208.9 28.1 313 67-425 9-336 (355)
56 PLN02414 glycine dehydrogenase 99.9 1.5E-23 3.2E-28 220.5 35.0 348 37-425 504-886 (993)
57 PRK06207 aspartate aminotransf 99.9 1.1E-23 2.4E-28 207.6 31.2 328 56-426 40-384 (405)
58 PRK12414 putative aminotransfe 99.9 7E-24 1.5E-28 207.8 28.8 328 56-427 30-370 (384)
59 PRK05957 aspartate aminotransf 99.9 1.1E-23 2.4E-28 206.8 29.8 327 56-426 28-366 (389)
60 PRK09082 methionine aminotrans 99.9 4.7E-24 1E-28 209.3 27.2 329 56-427 31-372 (386)
61 PRK08960 hypothetical protein; 99.9 1.1E-23 2.4E-28 206.8 29.6 329 54-426 31-369 (387)
62 PRK07681 aspartate aminotransf 99.9 1.9E-23 4.2E-28 205.8 31.3 328 53-427 30-371 (399)
63 KOG0257 Kynurenine aminotransf 99.9 5.3E-24 1.2E-28 197.5 25.4 305 41-381 18-344 (420)
64 PRK08363 alanine aminotransfer 99.9 2E-23 4.4E-28 205.7 31.0 335 52-427 27-377 (398)
65 PRK07682 hypothetical protein; 99.9 1.1E-23 2.4E-28 206.3 28.5 327 57-427 22-359 (378)
66 PLN02656 tyrosine transaminase 99.9 3.4E-23 7.3E-28 204.5 31.9 331 53-427 29-386 (409)
67 PLN00143 tyrosine/nicotianamin 99.9 4.3E-23 9.3E-28 203.7 32.4 352 39-427 15-387 (409)
68 KOG0259 Tyrosine aminotransfer 99.9 2.8E-23 6.2E-28 189.4 28.2 335 56-427 62-416 (447)
69 PRK07324 transaminase; Validat 99.9 1.3E-23 2.8E-28 205.0 28.1 320 53-427 24-353 (373)
70 PRK13355 bifunctional HTH-doma 99.9 2.3E-23 5E-28 211.4 30.9 335 52-427 143-497 (517)
71 PRK08912 hypothetical protein; 99.9 2.6E-23 5.6E-28 204.2 30.2 329 56-427 27-369 (387)
72 PLN02187 rooty/superroot1 99.9 8.4E-23 1.8E-27 203.9 34.2 335 54-427 65-421 (462)
73 PRK05942 aspartate aminotransf 99.9 3.4E-23 7.3E-28 203.8 30.9 331 53-426 33-374 (394)
74 TIGR03540 DapC_direct LL-diami 99.9 5.4E-23 1.2E-27 201.7 31.5 328 54-427 28-369 (383)
75 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 2.7E-23 5.9E-28 202.6 28.6 278 98-424 54-347 (370)
76 PRK07337 aminotransferase; Val 99.9 5.5E-23 1.2E-27 202.0 30.3 328 55-426 30-371 (388)
77 PRK09276 LL-diaminopimelate am 99.9 1.1E-22 2.3E-27 199.8 32.1 330 53-427 29-371 (385)
78 TIGR03537 DapC succinyldiamino 99.9 6.6E-23 1.4E-27 198.6 29.9 321 60-425 5-334 (350)
79 PRK05764 aspartate aminotransf 99.9 9.4E-23 2E-27 200.8 31.2 329 54-427 30-374 (393)
80 PLN02724 Molybdenum cofactor s 99.9 3E-23 6.5E-28 219.6 28.3 307 71-409 50-418 (805)
81 PRK08068 transaminase; Reviewe 99.9 1E-22 2.2E-27 200.1 30.2 326 55-427 32-372 (389)
82 PRK07309 aromatic amino acid a 99.9 1.2E-22 2.6E-27 199.6 30.6 326 56-426 31-370 (391)
83 PRK07683 aminotransferase A; V 99.9 1.1E-22 2.5E-27 199.5 30.1 326 57-426 30-365 (387)
84 PLN02721 threonine aldolase 99.9 3.4E-23 7.3E-28 201.0 25.5 308 59-425 9-331 (353)
85 PRK07777 aminotransferase; Val 99.9 1.5E-22 3.2E-27 198.8 30.0 331 56-427 25-369 (387)
86 PTZ00094 serine hydroxymethylt 99.9 1.8E-22 3.9E-27 201.4 30.3 315 67-425 45-383 (452)
87 PRK06290 aspartate aminotransf 99.9 2.5E-22 5.4E-27 197.9 30.6 324 54-425 43-383 (410)
88 cd00378 SHMT Serine-glycine hy 99.9 1.9E-22 4.2E-27 199.2 29.3 336 40-425 5-360 (402)
89 PRK06348 aspartate aminotransf 99.9 2.8E-22 6.1E-27 196.6 30.0 326 57-426 31-367 (384)
90 PRK07366 succinyldiaminopimela 99.9 2.8E-22 6.1E-27 196.9 30.0 332 53-426 28-372 (388)
91 TIGR01265 tyr_nico_aTase tyros 99.9 9.9E-22 2.1E-26 193.9 33.9 333 54-427 30-384 (403)
92 TIGR01822 2am3keto_CoA 2-amino 99.9 1.2E-22 2.5E-27 200.2 27.2 320 53-426 36-369 (393)
93 PRK07550 hypothetical protein; 99.9 7.2E-22 1.6E-26 193.9 32.1 343 38-426 13-368 (386)
94 cd00609 AAT_like Aspartate ami 99.9 5.3E-22 1.2E-26 192.0 30.3 319 68-427 12-337 (350)
95 PRK09147 succinyldiaminopimela 99.9 5E-22 1.1E-26 195.6 30.3 328 54-427 28-379 (396)
96 PTZ00433 tyrosine aminotransfe 99.9 7.5E-22 1.6E-26 195.2 31.6 332 53-427 31-391 (412)
97 PRK13238 tnaA tryptophanase/L- 99.9 2.2E-22 4.7E-27 199.7 27.0 328 52-425 33-411 (460)
98 PRK03080 phosphoserine aminotr 99.9 6.5E-23 1.4E-27 200.1 22.9 310 66-426 21-353 (378)
99 TIGR01437 selA_rel uncharacter 99.9 5.8E-22 1.3E-26 192.1 27.7 286 67-408 24-332 (363)
100 PRK13580 serine hydroxymethylt 99.9 4.3E-22 9.3E-27 194.5 26.7 327 67-426 60-421 (493)
101 cd06502 TA_like Low-specificit 99.9 1E-22 2.2E-27 196.5 22.2 304 61-426 3-321 (338)
102 PRK12566 glycine dehydrogenase 99.9 6.3E-22 1.4E-26 204.5 28.8 350 35-425 477-855 (954)
103 PRK14807 histidinol-phosphate 99.9 1.1E-21 2.4E-26 190.0 28.8 307 58-427 25-336 (351)
104 PRK15481 transcriptional regul 99.9 5.3E-22 1.2E-26 197.5 27.0 349 8-426 53-412 (431)
105 TIGR01141 hisC histidinol-phos 99.9 3.5E-22 7.6E-27 193.4 24.7 310 57-426 21-334 (346)
106 PRK08056 threonine-phosphate d 99.9 9.1E-22 2E-26 191.0 27.4 313 55-427 20-339 (356)
107 PTZ00377 alanine aminotransfer 99.9 2.4E-21 5.2E-26 195.0 31.1 313 72-426 93-457 (481)
108 PLN03026 histidinol-phosphate 99.9 2.7E-21 6E-26 189.0 30.4 310 55-427 52-366 (380)
109 PRK06225 aspartate aminotransf 99.9 1.7E-21 3.6E-26 191.0 28.8 319 56-426 29-358 (380)
110 TIGR01264 tyr_amTase_E tyrosin 99.9 5.8E-21 1.2E-25 188.4 32.4 330 56-427 32-382 (401)
111 TIGR03538 DapC_gpp succinyldia 99.9 4.1E-21 8.8E-26 189.0 31.0 327 53-426 26-377 (393)
112 PRK09265 aminotransferase AlaT 99.9 3.4E-21 7.4E-26 190.2 30.4 331 53-426 31-383 (404)
113 PRK04870 histidinol-phosphate 99.9 9.2E-22 2E-26 191.1 25.5 309 58-427 29-342 (356)
114 PRK00011 glyA serine hydroxyme 99.9 2.5E-21 5.4E-26 192.0 28.9 311 67-424 36-363 (416)
115 COG0079 HisC Histidinol-phosph 99.9 2.2E-21 4.7E-26 185.7 27.4 301 67-427 35-338 (356)
116 PRK06836 aspartate aminotransf 99.9 6.7E-21 1.4E-25 187.4 30.9 328 58-426 36-373 (394)
117 PRK09148 aminotransferase; Val 99.9 8.2E-21 1.8E-25 187.3 31.3 332 53-426 28-372 (405)
118 PRK08636 aspartate aminotransf 99.9 8.3E-21 1.8E-25 187.3 30.6 334 53-426 31-382 (403)
119 PRK07179 hypothetical protein; 99.9 2.2E-21 4.7E-26 191.7 26.5 304 68-426 69-378 (407)
120 PRK11658 UDP-4-amino-4-deoxy-L 99.9 2.8E-21 6.2E-26 188.6 26.4 292 70-409 14-323 (379)
121 cd06454 KBL_like KBL_like; thi 99.9 3E-21 6.6E-26 187.0 26.4 305 69-426 17-331 (349)
122 COG0399 WecE Predicted pyridox 99.9 3.6E-21 7.8E-26 182.3 25.7 289 70-405 15-311 (374)
123 cd00616 AHBA_syn 3-amino-5-hyd 99.9 2.3E-21 5.1E-26 188.0 25.3 287 75-409 4-299 (352)
124 PRK06107 aspartate aminotransf 99.9 9.3E-21 2E-25 186.9 29.8 330 54-427 32-383 (402)
125 PRK06358 threonine-phosphate d 99.9 5.2E-21 1.1E-25 185.4 27.4 308 58-427 22-339 (354)
126 PRK05387 histidinol-phosphate 99.9 5.4E-21 1.2E-25 185.6 27.1 308 58-427 27-337 (353)
127 COG1168 MalY Bifunctional PLP- 99.9 1.8E-20 3.9E-25 172.5 27.9 329 58-428 28-370 (388)
128 PRK06939 2-amino-3-ketobutyrat 99.9 5.4E-21 1.2E-25 188.6 26.3 320 53-426 40-373 (397)
129 PRK01688 histidinol-phosphate 99.9 8.4E-22 1.8E-26 190.7 20.0 273 99-427 61-340 (351)
130 PRK05958 8-amino-7-oxononanoat 99.9 1.4E-20 3.1E-25 184.8 27.8 318 53-425 37-366 (385)
131 PLN02271 serine hydroxymethylt 99.9 4.4E-20 9.6E-25 180.9 30.7 323 67-424 159-514 (586)
132 PRK08175 aminotransferase; Val 99.9 4.8E-20 1E-24 181.5 31.4 329 53-426 27-371 (395)
133 PLN02672 methionine S-methyltr 99.9 1.5E-20 3.2E-25 198.5 29.1 328 53-427 695-1063(1082)
134 PLN02231 alanine transaminase 99.9 5.7E-20 1.2E-24 185.6 32.1 327 58-426 132-509 (534)
135 cd00615 Orn_deC_like Ornithine 99.9 5.4E-22 1.2E-26 187.2 16.1 226 98-360 62-294 (294)
136 PRK07568 aspartate aminotransf 99.9 6E-20 1.3E-24 181.1 30.8 327 55-426 30-374 (397)
137 PRK02610 histidinol-phosphate 99.9 1.6E-20 3.5E-25 183.4 26.3 310 60-427 33-355 (374)
138 PLN02368 alanine transaminase 99.9 1.4E-20 3E-25 184.5 25.8 272 68-379 82-393 (407)
139 PLN03226 serine hydroxymethylt 99.9 7.2E-20 1.6E-24 182.1 31.2 306 67-409 45-375 (475)
140 PRK06855 aminotransferase; Val 99.9 4E-20 8.7E-25 183.7 29.5 332 54-426 31-410 (433)
141 PRK00950 histidinol-phosphate 99.9 1.7E-20 3.8E-25 182.6 26.3 307 56-427 35-346 (361)
142 PRK03158 histidinol-phosphate 99.9 1.5E-20 3.2E-25 182.9 25.7 309 58-427 32-345 (359)
143 cd00611 PSAT_like Phosphoserin 99.9 3E-21 6.5E-26 186.9 20.1 313 67-426 9-336 (355)
144 TIGR00858 bioF 8-amino-7-oxono 99.9 3.1E-20 6.8E-25 180.6 27.3 319 53-425 14-344 (360)
145 PRK01533 histidinol-phosphate 99.9 7.3E-21 1.6E-25 184.9 22.4 305 55-427 29-339 (366)
146 PRK09105 putative aminotransfe 99.9 2.8E-20 6.2E-25 181.1 26.6 304 59-427 47-354 (370)
147 PRK07590 L,L-diaminopimelate a 99.9 6.7E-20 1.5E-24 181.2 28.9 340 39-425 17-392 (409)
148 KOG2862 Alanine-glyoxylate ami 99.9 5.6E-20 1.2E-24 163.7 25.2 309 72-424 28-359 (385)
149 PRK02731 histidinol-phosphate 99.9 3.9E-20 8.5E-25 180.5 26.8 313 55-427 32-350 (367)
150 PRK13034 serine hydroxymethylt 99.9 7.8E-20 1.7E-24 180.3 29.1 338 40-426 14-368 (416)
151 PRK07908 hypothetical protein; 99.9 5.5E-20 1.2E-24 178.1 27.5 304 57-427 24-331 (349)
152 PRK05839 hypothetical protein; 99.9 1E-19 2.2E-24 177.7 28.3 327 44-426 12-356 (374)
153 PRK05355 3-phosphoserine/phosp 99.9 9.9E-21 2.2E-25 182.9 20.8 311 65-426 11-338 (360)
154 PLN02450 1-aminocyclopropane-1 99.9 4.3E-20 9.3E-25 184.7 26.1 325 58-426 41-411 (468)
155 TIGR01364 serC_1 phosphoserine 99.9 2.6E-20 5.6E-25 179.2 23.2 305 70-426 5-328 (349)
156 PRK05166 histidinol-phosphate 99.9 6.5E-20 1.4E-24 179.0 26.3 309 58-427 39-355 (371)
157 cd00617 Tnase_like Tryptophana 99.9 1E-19 2.2E-24 178.2 27.3 328 53-425 9-386 (431)
158 TIGR01825 gly_Cac_T_rel pyrido 99.9 1E-19 2.2E-24 178.7 26.6 317 53-425 31-360 (385)
159 PRK03317 histidinol-phosphate 99.9 7.1E-20 1.5E-24 178.6 25.2 310 60-427 31-348 (368)
160 TIGR03588 PseC UDP-4-keto-6-de 99.9 1.1E-19 2.3E-24 178.1 26.3 293 70-409 10-326 (380)
161 TIGR03539 DapC_actino succinyl 99.9 3.1E-19 6.8E-24 173.3 28.7 326 39-427 6-345 (357)
162 PRK06425 histidinol-phosphate 99.9 6E-20 1.3E-24 176.5 23.4 268 99-427 44-317 (332)
163 PRK04635 histidinol-phosphate 99.9 3.9E-20 8.4E-25 179.4 21.2 270 99-427 64-339 (354)
164 PLN02376 1-aminocyclopropane-1 99.9 1.3E-19 2.7E-24 182.1 25.3 294 87-426 90-419 (496)
165 COG1003 GcvP Glycine cleavage 99.9 8.4E-19 1.8E-23 163.2 28.5 347 34-416 42-419 (496)
166 TIGR01366 serC_3 phosphoserine 99.9 5.1E-20 1.1E-24 178.3 21.4 308 68-426 14-340 (361)
167 PRK07865 N-succinyldiaminopime 99.9 4.9E-19 1.1E-23 172.5 28.5 324 42-426 14-350 (364)
168 TIGR01140 L_thr_O3P_dcar L-thr 99.9 1.2E-19 2.5E-24 174.4 23.4 263 99-427 51-319 (330)
169 PRK03321 putative aminotransfe 99.9 1.2E-19 2.6E-24 176.0 23.0 303 59-427 26-335 (352)
170 PRK05968 hypothetical protein; 99.9 2.1E-19 4.5E-24 175.7 24.8 250 91-407 63-330 (389)
171 PRK14808 histidinol-phosphate 99.8 4.8E-19 1E-23 170.2 26.3 298 55-427 19-321 (335)
172 PRK09275 aspartate aminotransf 99.8 2.7E-19 5.8E-24 178.5 25.2 217 58-292 103-327 (527)
173 PRK04781 histidinol-phosphate 99.8 5.6E-19 1.2E-23 171.8 25.8 277 99-427 63-347 (364)
174 PRK08153 histidinol-phosphate 99.8 8.6E-19 1.9E-23 170.9 27.1 310 59-427 36-349 (369)
175 PLN02607 1-aminocyclopropane-1 99.8 7.3E-19 1.6E-23 174.6 26.2 296 87-426 91-418 (447)
176 PF01041 DegT_DnrJ_EryC1: DegT 99.8 3.3E-19 7.2E-24 173.3 23.3 294 71-410 6-310 (363)
177 COG0112 GlyA Glycine/serine hy 99.8 1.1E-18 2.3E-23 161.4 25.1 311 67-424 37-364 (413)
178 PF00155 Aminotran_1_2: Aminot 99.8 2.7E-19 5.8E-24 174.4 22.5 295 84-424 37-348 (363)
179 TIGR02379 ECA_wecE TDP-4-keto- 99.8 1.3E-18 2.8E-23 169.2 26.8 294 70-409 11-320 (376)
180 PRK07392 threonine-phosphate d 99.8 1.4E-18 3E-23 169.0 26.9 308 58-427 25-343 (360)
181 PLN02414 glycine dehydrogenase 99.8 2.5E-18 5.4E-23 181.4 30.6 337 30-426 76-449 (993)
182 PRK08133 O-succinylhomoserine 99.8 1.3E-18 2.7E-23 170.3 26.3 229 99-382 65-314 (390)
183 PRK06767 methionine gamma-lyas 99.8 1E-18 2.2E-23 170.9 25.6 255 89-407 59-329 (386)
184 PRK15407 lipopolysaccharide bi 99.8 1.2E-18 2.6E-23 172.3 26.2 284 90-409 62-377 (438)
185 PRK09028 cystathionine beta-ly 99.8 7.5E-19 1.6E-23 170.6 24.1 232 90-381 60-313 (394)
186 PRK07050 cystathionine beta-ly 99.8 4.9E-19 1.1E-23 173.1 22.8 253 91-406 65-340 (394)
187 COG1167 ARO8 Transcriptional r 99.8 3E-18 6.6E-23 170.6 28.8 323 58-427 92-437 (459)
188 TIGR03801 asp_4_decarbox aspar 99.8 1.2E-18 2.7E-23 173.5 26.0 217 58-292 97-326 (521)
189 PRK07811 cystathionine gamma-s 99.8 1.5E-18 3.3E-23 169.6 25.8 233 91-382 61-315 (388)
190 TIGR01329 cysta_beta_ly_E cyst 99.8 8.6E-19 1.9E-23 170.7 24.0 248 98-407 50-319 (378)
191 TIGR03542 DAPAT_plant LL-diami 99.8 4.9E-18 1.1E-22 167.6 29.5 325 54-426 32-386 (402)
192 cd00614 CGS_like CGS_like: Cys 99.8 1.6E-18 3.4E-23 168.8 25.3 235 89-382 38-294 (369)
193 PRK13392 5-aminolevulinate syn 99.8 1.6E-18 3.6E-23 171.4 25.8 307 67-425 60-376 (410)
194 TIGR01821 5aminolev_synth 5-am 99.8 2.5E-18 5.3E-23 169.8 26.6 306 67-425 59-375 (402)
195 PRK08247 cystathionine gamma-s 99.8 1.5E-18 3.2E-23 168.6 24.6 231 91-381 52-288 (366)
196 PRK14809 histidinol-phosphate 99.8 3.6E-18 7.7E-23 166.0 27.1 307 55-427 30-341 (357)
197 TIGR01324 cysta_beta_ly_B cyst 99.8 1.2E-18 2.5E-23 169.2 23.5 233 90-382 49-303 (377)
198 PRK09440 avtA valine--pyruvate 99.8 5.5E-18 1.2E-22 168.1 28.9 330 56-426 31-393 (416)
199 PRK05367 glycine dehydrogenase 99.8 7.2E-18 1.6E-22 178.7 31.3 336 31-425 53-421 (954)
200 TIGR03576 pyridox_MJ0158 pyrid 99.8 5.5E-18 1.2E-22 162.9 27.8 314 39-428 7-328 (346)
201 PF01276 OKR_DC_1: Orn/Lys/Arg 99.8 2.8E-19 6E-24 171.9 18.7 268 99-408 70-399 (417)
202 PRK08861 cystathionine gamma-s 99.8 9E-19 1.9E-23 170.2 21.7 234 90-382 52-307 (388)
203 PRK08249 cystathionine gamma-s 99.8 3.8E-18 8.2E-23 167.0 26.1 235 89-382 62-317 (398)
204 PLN02822 serine palmitoyltrans 99.8 6.8E-18 1.5E-22 169.1 28.6 334 53-426 107-457 (481)
205 PRK07504 O-succinylhomoserine 99.8 2.1E-18 4.6E-23 169.0 23.9 235 90-382 64-319 (398)
206 PTZ00376 aspartate aminotransf 99.8 2.2E-18 4.7E-23 170.1 24.0 320 56-425 30-383 (404)
207 PLN02242 methionine gamma-lyas 99.8 3.2E-18 6.9E-23 168.3 24.3 234 90-381 75-334 (418)
208 PLN02483 serine palmitoyltrans 99.8 6.7E-18 1.5E-22 169.4 27.1 281 94-426 145-446 (489)
209 PRK07269 cystathionine gamma-s 99.8 2.2E-18 4.7E-23 166.6 22.6 235 89-381 52-288 (364)
210 TIGR01328 met_gam_lyase methio 99.8 4.4E-18 9.4E-23 166.4 24.8 234 90-382 58-314 (391)
211 COG2008 GLY1 Threonine aldolas 99.8 1.7E-18 3.7E-23 159.2 20.1 285 66-407 10-305 (342)
212 PRK08776 cystathionine gamma-s 99.8 4.8E-18 1.1E-22 166.5 24.5 229 99-382 64-314 (405)
213 PRK07810 O-succinylhomoserine 99.8 3.2E-18 6.8E-23 167.8 23.2 235 89-382 68-324 (403)
214 PRK06234 methionine gamma-lyas 99.8 8E-18 1.7E-22 165.2 25.9 237 89-382 62-321 (400)
215 PRK09257 aromatic amino acid a 99.8 7.2E-18 1.6E-22 166.1 25.7 319 57-425 28-378 (396)
216 PRK09064 5-aminolevulinate syn 99.8 9.4E-18 2E-22 166.0 26.6 307 67-425 60-376 (407)
217 TIGR01325 O_suc_HS_sulf O-succ 99.8 4.7E-18 1E-22 165.9 24.1 231 91-381 54-306 (380)
218 PRK08134 O-acetylhomoserine am 99.8 5.7E-18 1.2E-22 167.0 24.9 245 90-382 63-351 (433)
219 PRK03967 histidinol-phosphate 99.8 6.8E-18 1.5E-22 162.5 24.5 292 59-427 22-318 (337)
220 TIGR02080 O_succ_thio_ly O-suc 99.8 6.5E-18 1.4E-22 164.5 24.6 229 99-382 55-305 (382)
221 PRK08045 cystathionine gamma-s 99.8 3E-18 6.5E-23 167.0 21.8 229 99-382 56-306 (386)
222 PRK08114 cystathionine beta-ly 99.8 6.7E-18 1.5E-22 163.4 23.6 234 89-382 60-317 (395)
223 PRK08248 O-acetylhomoserine am 99.8 1.9E-17 4.2E-22 163.3 27.1 245 90-382 63-351 (431)
224 PRK08637 hypothetical protein; 99.8 7.5E-18 1.6E-22 165.5 24.1 310 70-426 23-367 (388)
225 PRK08064 cystathionine beta-ly 99.8 8.3E-18 1.8E-22 164.5 24.2 231 91-381 54-306 (390)
226 PF00464 SHMT: Serine hydroxym 99.8 5.6E-18 1.2E-22 162.2 22.0 316 67-424 31-379 (399)
227 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 2.1E-17 4.5E-22 161.4 26.5 291 72-409 13-319 (375)
228 PRK10534 L-threonine aldolase; 99.8 5.8E-18 1.2E-22 163.0 21.6 289 68-425 12-312 (333)
229 PRK13393 5-aminolevulinate syn 99.8 4.7E-17 1E-21 160.8 27.9 306 68-425 60-375 (406)
230 PRK08354 putative aminotransfe 99.8 3.6E-17 7.8E-22 155.8 25.4 180 60-290 13-196 (311)
231 PRK06702 O-acetylhomoserine am 99.8 4.5E-17 9.7E-22 159.5 26.3 246 90-382 60-348 (432)
232 PRK07582 cystathionine gamma-l 99.8 3.6E-17 7.7E-22 158.8 24.4 229 90-381 50-300 (366)
233 KOG1368 Threonine aldolase [Am 99.8 6.4E-18 1.4E-22 149.8 17.1 301 67-426 33-348 (384)
234 PLN02397 aspartate transaminas 99.8 7.5E-17 1.6E-21 159.8 26.5 305 58-407 51-393 (423)
235 PRK05937 8-amino-7-oxononanoat 99.8 8.5E-17 1.8E-21 156.9 26.0 269 92-425 53-329 (370)
236 TIGR01365 serC_2 phosphoserine 99.8 2.6E-17 5.7E-22 158.3 22.0 308 69-425 15-352 (374)
237 COG1103 Archaea-specific pyrid 99.8 2.8E-17 6E-22 143.9 19.4 271 68-380 29-318 (382)
238 PLN02509 cystathionine beta-ly 99.8 1.7E-17 3.7E-22 163.9 20.4 229 96-380 134-384 (464)
239 PRK08574 cystathionine gamma-s 99.8 2E-17 4.3E-22 161.3 20.5 218 90-367 52-275 (385)
240 PRK04311 selenocysteine syntha 99.8 1.5E-16 3.3E-21 157.2 26.3 286 67-396 97-424 (464)
241 COG0156 BioF 7-keto-8-aminopel 99.8 1.5E-16 3.2E-21 152.2 25.3 301 68-426 54-370 (388)
242 TIGR02618 tyr_phenol_ly tyrosi 99.8 5.9E-17 1.3E-21 156.4 22.6 289 65-397 45-368 (450)
243 PRK05613 O-acetylhomoserine am 99.8 5E-17 1.1E-21 160.2 22.3 241 99-382 73-360 (437)
244 PRK07812 O-acetylhomoserine am 99.8 7.9E-17 1.7E-21 158.7 23.2 246 90-382 68-355 (436)
245 PRK05664 threonine-phosphate d 99.8 1.7E-16 3.7E-21 152.3 24.5 252 99-425 53-309 (330)
246 PRK06460 hypothetical protein; 99.8 5.8E-17 1.3E-21 157.8 21.5 233 90-382 44-298 (376)
247 PRK07503 methionine gamma-lyas 99.8 3.3E-17 7.1E-22 160.9 19.8 233 90-382 64-320 (403)
248 PRK15029 arginine decarboxylas 99.8 9.5E-17 2.1E-21 165.2 23.6 228 99-363 209-466 (755)
249 TIGR00474 selA seryl-tRNA(sec) 99.8 1.8E-16 3.8E-21 156.3 24.5 286 67-396 92-419 (454)
250 cd01494 AAT_I Aspartate aminot 99.8 2E-17 4.3E-22 142.7 15.2 164 99-291 4-170 (170)
251 PRK06959 putative threonine-ph 99.8 1.5E-16 3.2E-21 153.2 22.6 253 98-425 56-314 (339)
252 PRK05939 hypothetical protein; 99.8 4.2E-16 9.2E-21 152.4 25.9 246 89-382 45-321 (397)
253 KOG0256 1-aminocyclopropane-1- 99.8 3.4E-16 7.3E-21 144.7 23.1 299 87-426 117-442 (471)
254 PRK05967 cystathionine beta-ly 99.8 1.2E-16 2.7E-21 154.9 21.3 230 97-382 66-317 (395)
255 PRK06084 O-acetylhomoserine am 99.7 6.2E-16 1.3E-20 152.4 26.1 244 91-382 58-346 (425)
256 PRK07671 cystathionine beta-ly 99.7 1.5E-16 3.3E-21 154.8 20.8 226 99-380 54-301 (377)
257 PRK05994 O-acetylhomoserine am 99.7 4.3E-16 9.2E-21 154.0 23.9 242 91-382 63-350 (427)
258 PRK00854 rocD ornithine--oxo-a 99.7 1.6E-15 3.6E-20 149.7 27.8 300 68-425 58-380 (401)
259 PRK07505 hypothetical protein; 99.7 9.9E-16 2.2E-20 151.2 26.1 324 53-425 44-378 (402)
260 cd00610 OAT_like Acetyl ornith 99.7 8E-16 1.7E-20 152.6 25.3 325 53-426 34-395 (413)
261 PRK06176 cystathionine gamma-s 99.7 2.5E-16 5.4E-21 153.3 19.9 233 90-382 49-303 (380)
262 TIGR00461 gcvP glycine dehydro 99.7 1.1E-14 2.3E-19 152.3 32.7 337 31-425 41-410 (939)
263 TIGR01326 OAH_OAS_sulfhy OAH/O 99.7 9.6E-16 2.1E-20 151.4 23.8 236 99-382 61-343 (418)
264 TIGR00707 argD acetylornithine 99.7 2E-15 4.3E-20 148.0 25.8 302 68-425 44-360 (379)
265 PRK13237 tyrosine phenol-lyase 99.7 2.1E-15 4.6E-20 146.0 23.8 293 67-405 54-380 (460)
266 PLN03227 serine palmitoyltrans 99.7 4.4E-15 9.6E-20 145.5 26.6 312 68-427 13-363 (392)
267 PRK03244 argD acetylornithine 99.7 2.7E-15 5.8E-20 148.0 25.3 301 69-425 61-373 (398)
268 PLN02955 8-amino-7-oxononanoat 99.7 3.1E-15 6.8E-20 146.4 25.2 310 68-426 117-441 (476)
269 PLN02452 phosphoserine transam 99.7 2.2E-15 4.8E-20 145.0 23.6 286 89-426 46-343 (365)
270 PF02347 GDC-P: Glycine cleava 99.7 1.4E-14 3E-19 139.4 28.0 324 31-405 42-400 (429)
271 PRK06434 cystathionine gamma-l 99.7 2E-15 4.4E-20 146.3 20.4 230 89-381 62-308 (384)
272 PRK07049 methionine gamma-lyas 99.7 7.3E-15 1.6E-19 145.1 23.8 234 90-382 82-350 (427)
273 PRK13578 ornithine decarboxyla 99.7 2.8E-15 6E-20 152.9 21.2 236 99-368 178-446 (720)
274 PRK02627 acetylornithine amino 99.7 1.2E-14 2.5E-19 143.5 24.5 316 53-425 37-373 (396)
275 PRK12462 phosphoserine aminotr 99.7 1.2E-14 2.6E-19 138.5 23.7 285 89-425 43-341 (364)
276 COG3844 Kynureninase [Amino ac 99.7 1.5E-14 3.2E-19 130.3 21.2 282 92-424 73-379 (407)
277 PRK04073 rocD ornithine--oxo-a 99.7 2.3E-14 4.9E-19 141.2 24.9 301 67-424 56-375 (396)
278 PRK15400 lysine decarboxylase 99.7 5.2E-15 1.1E-19 150.8 20.6 231 99-368 199-455 (714)
279 PF01212 Beta_elim_lyase: Beta 99.7 1.8E-16 3.8E-21 147.7 8.5 254 68-370 7-278 (290)
280 COG0403 GcvP Glycine cleavage 99.7 1.2E-13 2.7E-18 129.2 26.9 328 33-408 53-418 (450)
281 COG2873 MET17 O-acetylhomoseri 99.7 3.5E-14 7.7E-19 130.3 22.8 259 89-395 60-361 (426)
282 PF01053 Cys_Met_Meta_PP: Cys/ 99.7 2.2E-14 4.7E-19 138.8 22.5 235 90-382 54-311 (386)
283 PTZ00125 ornithine aminotransf 99.6 1.2E-13 2.5E-18 136.5 26.9 310 68-425 48-374 (400)
284 KOG0633 Histidinol phosphate a 99.6 4.2E-15 9E-20 129.6 14.3 269 119-428 88-362 (375)
285 PRK01278 argD acetylornithine 99.6 2E-13 4.4E-18 134.2 28.4 304 67-425 47-367 (389)
286 PRK15399 lysine decarboxylase 99.6 6.9E-14 1.5E-18 142.7 24.5 224 99-363 199-444 (713)
287 KOG2467 Glycine/serine hydroxy 99.6 6.4E-13 1.4E-17 121.4 24.3 305 67-408 51-381 (477)
288 COG0626 MetC Cystathionine bet 99.6 1.6E-13 3.5E-18 131.2 21.4 235 89-382 61-319 (396)
289 PRK02936 argD acetylornithine 99.6 1.7E-12 3.7E-17 127.1 29.0 297 67-424 45-357 (377)
290 TIGR01885 Orn_aminotrans ornit 99.6 1.1E-12 2.4E-17 129.4 27.8 305 68-425 54-381 (401)
291 KOG0634 Aromatic amino acid am 99.6 1.4E-12 3.1E-17 121.9 23.9 304 86-427 95-448 (472)
292 TIGR03246 arg_catab_astC succi 99.6 1.3E-12 2.9E-17 128.6 25.1 310 67-425 51-374 (397)
293 KOG1360 5-aminolevulinate synt 99.6 7.4E-13 1.6E-17 122.2 20.8 300 68-424 186-502 (570)
294 PRK05093 argD bifunctional N-s 99.6 2.9E-12 6.4E-17 126.5 26.6 303 67-425 56-379 (403)
295 COG1982 LdcC Arginine/lysine/o 99.5 6.3E-13 1.4E-17 130.5 21.2 268 99-408 74-374 (557)
296 PRK12566 glycine dehydrogenase 99.5 1.3E-11 2.8E-16 128.7 28.0 315 31-408 56-412 (954)
297 PLN02624 ornithine-delta-amino 99.5 2.4E-11 5.1E-16 121.9 29.0 303 68-424 92-422 (474)
298 COG3977 Alanine-alpha-ketoisov 99.5 1.5E-11 3.3E-16 109.8 22.9 346 39-425 16-392 (417)
299 PRK12381 bifunctional succinyl 99.5 1.1E-11 2.3E-16 122.5 23.3 308 68-425 56-378 (406)
300 PRK04260 acetylornithine amino 99.5 5.9E-11 1.3E-15 116.2 27.7 296 69-426 46-357 (375)
301 KOG1359 Glycine C-acetyltransf 99.5 7.5E-12 1.6E-16 111.3 18.6 300 68-425 82-391 (417)
302 KOG2040 Glycine dehydrogenase 99.4 1.3E-11 2.7E-16 120.4 20.4 286 89-409 576-884 (1001)
303 TIGR02617 tnaA_trp_ase tryptop 99.4 1.6E-11 3.4E-16 117.9 20.8 295 68-405 55-388 (467)
304 KOG0258 Alanine aminotransfera 99.4 1.4E-10 3.1E-15 107.1 25.9 308 83-425 105-453 (475)
305 PRK03715 argD acetylornithine 99.4 9.7E-11 2.1E-15 114.9 26.5 305 68-425 53-372 (395)
306 COG4992 ArgD Ornithine/acetylo 99.4 5E-11 1.1E-15 112.5 22.3 308 53-423 40-375 (404)
307 TIGR00713 hemL glutamate-1-sem 99.4 9.6E-11 2.1E-15 116.5 25.8 206 53-292 46-278 (423)
308 KOG0053 Cystathionine beta-lya 99.4 1.3E-11 2.8E-16 116.7 17.7 218 91-367 77-300 (409)
309 PRK04612 argD acetylornithine 99.4 3.6E-10 7.9E-15 111.2 26.3 326 53-425 38-382 (408)
310 PRK05964 adenosylmethionine--8 99.3 6.6E-10 1.4E-14 110.3 25.7 333 53-425 40-401 (423)
311 PRK00062 glutamate-1-semialdeh 99.3 4.7E-10 1E-14 111.4 23.1 308 53-408 48-394 (426)
312 PF05889 SLA_LP_auto_ag: Solub 99.3 1.7E-10 3.7E-15 108.7 17.5 272 95-405 56-340 (389)
313 PRK05769 4-aminobutyrate amino 99.3 3.7E-09 8E-14 105.2 27.9 309 67-425 70-418 (441)
314 PRK08117 4-aminobutyrate amino 99.3 2.1E-09 4.5E-14 107.1 26.0 325 53-424 41-407 (433)
315 PRK06058 4-aminobutyrate amino 99.3 3E-09 6.5E-14 106.1 26.8 311 67-424 72-420 (443)
316 COG1921 SelA Selenocysteine sy 99.3 4.5E-10 9.7E-15 106.0 18.6 190 67-292 38-237 (395)
317 PRK08088 4-aminobutyrate amino 99.3 5.6E-09 1.2E-13 103.8 27.7 312 67-425 57-402 (425)
318 PRK08360 4-aminobutyrate amino 99.3 5.4E-09 1.2E-13 104.0 27.3 310 67-424 57-404 (443)
319 PLN02760 4-aminobutyrate:pyruv 99.3 5.9E-09 1.3E-13 105.0 27.5 337 53-424 87-469 (504)
320 PLN00144 acetylornithine trans 99.2 9.5E-09 2.1E-13 100.6 27.7 310 67-426 31-360 (382)
321 TIGR02407 ectoine_ectB diamino 99.2 1.8E-08 3.9E-13 99.6 29.7 308 67-425 51-391 (412)
322 TIGR00700 GABAtrnsam 4-aminobu 99.2 1.4E-08 3.1E-13 100.7 28.9 311 67-425 49-399 (420)
323 PRK06777 4-aminobutyrate amino 99.2 1E-08 2.2E-13 101.7 27.7 310 67-424 56-399 (421)
324 PRK09792 4-aminobutyrate trans 99.2 2E-08 4.3E-13 99.6 28.8 314 67-425 56-400 (421)
325 TIGR03372 putres_am_tran putre 99.2 2.1E-08 4.6E-13 99.3 28.9 305 67-425 91-423 (442)
326 KOG1357 Serine palmitoyltransf 99.2 2.3E-10 5.1E-15 107.7 13.8 283 92-426 179-482 (519)
327 PRK09264 diaminobutyrate--2-ox 99.2 2.2E-08 4.8E-13 99.4 28.7 322 53-425 37-395 (425)
328 PRK04013 argD acetylornithine/ 99.2 1.3E-08 2.8E-13 98.5 26.2 285 67-424 40-338 (364)
329 PRK11522 putrescine--2-oxoglut 99.2 1.1E-08 2.5E-13 102.0 26.4 311 67-425 98-430 (459)
330 COG1448 TyrB Aspartate/tyrosin 99.2 2.1E-09 4.6E-14 99.9 19.4 323 47-407 17-370 (396)
331 COG0160 GabT 4-aminobutyrate a 99.2 4.2E-08 9E-13 95.5 28.9 322 53-423 54-422 (447)
332 PRK13360 omega amino acid--pyr 99.2 1.2E-08 2.6E-13 101.5 26.0 335 53-424 44-418 (442)
333 PRK09221 beta alanine--pyruvat 99.2 9.3E-09 2E-13 102.4 25.1 332 53-424 47-421 (445)
334 PRK06541 hypothetical protein; 99.2 1.6E-08 3.4E-13 101.1 26.8 322 67-425 68-434 (460)
335 PRK06105 aminotransferase; Pro 99.2 1.9E-08 4.1E-13 100.7 25.9 336 53-424 46-427 (460)
336 PRK05965 hypothetical protein; 99.1 3.2E-08 7E-13 98.9 26.6 337 53-423 44-424 (459)
337 COG0001 HemL Glutamate-1-semia 99.1 2.5E-08 5.5E-13 95.4 24.4 305 53-408 51-398 (432)
338 PRK07495 4-aminobutyrate amino 99.1 2.2E-07 4.7E-12 92.1 31.3 326 53-423 38-398 (425)
339 PRK07678 aminotransferase; Val 99.1 1.5E-07 3.2E-12 94.0 29.4 337 53-424 45-427 (451)
340 PRK12403 putative aminotransfe 99.1 6.8E-08 1.5E-12 96.6 26.9 309 67-407 70-420 (460)
341 PRK08593 4-aminobutyrate amino 99.1 1.6E-07 3.4E-12 93.7 29.1 326 53-425 40-408 (445)
342 PRK12389 glutamate-1-semialdeh 99.1 9.2E-08 2E-12 95.0 26.3 295 67-408 69-397 (428)
343 PRK05639 4-aminobutyrate amino 99.1 7.9E-08 1.7E-12 96.0 25.8 310 67-424 69-421 (457)
344 PRK06918 4-aminobutyrate amino 99.1 2.4E-07 5.2E-12 92.8 28.9 312 67-425 70-422 (451)
345 COG3033 TnaA Tryptophanase [Am 99.0 7.8E-08 1.7E-12 88.5 21.7 281 87-406 75-392 (471)
346 PRK06062 hypothetical protein; 99.0 2.8E-07 6.1E-12 92.0 28.0 321 53-424 51-423 (451)
347 PLN02482 glutamate-1-semialdeh 99.0 1.7E-07 3.7E-12 93.8 26.3 296 67-408 115-443 (474)
348 PRK07482 hypothetical protein; 99.0 3.4E-07 7.4E-12 91.7 28.3 336 53-423 48-431 (461)
349 TIGR00508 bioA adenosylmethion 99.0 3.3E-07 7.1E-12 91.0 26.6 312 67-424 61-404 (427)
350 PF12897 Aminotran_MocR: Alani 99.0 3.8E-07 8.3E-12 85.4 24.4 239 155-427 125-397 (425)
351 PRK07483 hypothetical protein; 99.0 3.7E-07 8.1E-12 90.9 26.2 308 67-408 46-398 (443)
352 TIGR00709 dat 2,4-diaminobutyr 99.0 1.1E-06 2.3E-11 87.8 28.9 327 53-424 37-413 (442)
353 COG1932 SerC Phosphoserine ami 99.0 2.2E-07 4.8E-12 86.3 21.9 284 90-426 45-343 (365)
354 TIGR03251 LAT_fam L-lysine 6-t 99.0 4.5E-07 9.7E-12 90.2 25.9 287 99-425 89-413 (431)
355 PRK06917 hypothetical protein; 99.0 4.2E-07 9.1E-12 90.7 25.7 340 53-424 29-415 (447)
356 PRK07036 hypothetical protein; 99.0 5.4E-07 1.2E-11 90.3 26.5 309 67-407 67-420 (466)
357 PRK07046 aminotransferase; Val 99.0 5.7E-07 1.2E-11 89.8 26.5 292 67-407 91-420 (453)
358 PRK06943 adenosylmethionine--8 99.0 3.5E-07 7.6E-12 91.3 25.0 325 53-408 52-415 (453)
359 PF03841 SelA: L-seryl-tRNA se 98.9 9E-10 2E-14 103.2 5.3 222 99-362 51-297 (367)
360 PRK07986 adenosylmethionine--8 98.9 2.1E-07 4.6E-12 92.1 22.4 311 67-423 59-400 (428)
361 PRK00615 glutamate-1-semialdeh 98.9 8E-07 1.7E-11 88.1 25.5 296 67-408 69-398 (433)
362 PRK07481 hypothetical protein; 98.9 2.2E-06 4.7E-11 85.7 28.6 315 67-408 58-414 (449)
363 PRK06916 adenosylmethionine--8 98.9 4.8E-07 1E-11 90.6 23.9 325 53-408 54-424 (460)
364 KOG0630 Predicted pyridoxal-de 98.9 6.6E-08 1.4E-12 92.1 16.2 198 153-370 230-442 (838)
365 PRK05630 adenosylmethionine--8 98.9 1E-06 2.2E-11 87.3 25.3 314 67-424 56-398 (422)
366 COG0161 BioA Adenosylmethionin 98.9 2.7E-07 5.8E-12 89.5 20.5 307 68-409 61-413 (449)
367 PRK06209 glutamate-1-semialdeh 98.9 8.1E-07 1.8E-11 88.4 24.5 296 67-406 64-378 (431)
368 PRK06082 4-aminobutyrate amino 98.9 4.1E-06 8.8E-11 83.9 29.3 306 68-423 88-428 (459)
369 PRK06149 hypothetical protein; 98.9 2.3E-06 4.9E-11 93.4 29.2 309 68-423 600-947 (972)
370 PRK06938 diaminobutyrate--2-ox 98.9 4E-06 8.6E-11 84.0 28.7 313 67-423 79-437 (464)
371 PRK08742 adenosylmethionine--8 98.9 1.5E-06 3.3E-11 87.1 25.7 326 67-424 80-445 (472)
372 PRK07480 putative aminotransfe 98.9 1.1E-06 2.3E-11 87.9 24.6 310 67-407 66-416 (456)
373 PRK06173 adenosylmethionine--8 98.9 8.4E-07 1.8E-11 88.0 23.5 326 53-424 42-403 (429)
374 PRK07030 adenosylmethionine--8 98.8 5.7E-06 1.2E-10 82.9 28.3 327 53-408 45-415 (466)
375 PF00202 Aminotran_3: Aminotra 98.8 6.2E-07 1.3E-11 86.3 19.8 204 67-292 32-261 (339)
376 PRK06148 hypothetical protein; 98.8 5.4E-06 1.2E-10 90.6 28.2 311 67-424 638-988 (1013)
377 PF06838 Met_gamma_lyase: Meth 98.8 9.6E-07 2.1E-11 82.2 18.4 248 100-396 59-331 (403)
378 KOG3846 L-kynurenine hydrolase 98.7 7.7E-07 1.7E-11 80.3 17.1 282 99-423 115-437 (465)
379 KOG1402 Ornithine aminotransfe 98.7 7.1E-06 1.5E-10 75.0 23.0 274 99-423 105-404 (427)
380 PRK06931 diaminobutyrate--2-ox 98.7 1.7E-05 3.8E-10 79.4 28.5 327 53-424 56-432 (459)
381 KOG1358 Serine palmitoyltransf 98.7 3.5E-06 7.7E-11 78.6 21.2 326 53-426 92-445 (467)
382 TIGR00699 GABAtrns_euk 4-amino 98.7 2E-05 4.3E-10 78.6 28.1 312 67-424 74-444 (464)
383 PRK08297 L-lysine aminotransfe 98.7 6E-06 1.3E-10 82.3 24.5 317 67-424 61-419 (443)
384 KOG3843 Predicted serine hydro 98.5 3.6E-07 7.9E-12 80.7 8.1 234 94-360 56-295 (432)
385 KOG1404 Alanine-glyoxylate ami 98.4 3.8E-05 8.2E-10 72.0 19.2 310 67-423 66-415 (442)
386 KOG1401 Acetylornithine aminot 98.4 0.00021 4.6E-09 67.5 23.1 278 53-363 54-354 (433)
387 PLN02974 adenosylmethionine-8- 98.3 0.00028 6.1E-09 74.9 25.1 198 193-408 567-787 (817)
388 KOG1412 Aspartate aminotransfe 98.1 0.00014 3E-09 66.2 15.7 296 67-393 48-367 (410)
389 COG4100 Cystathionine beta-lya 98.1 0.00011 2.3E-09 66.6 14.1 151 102-281 72-237 (416)
390 KOG1411 Aspartate aminotransfe 98.1 8.4E-05 1.8E-09 68.5 13.5 303 50-380 46-379 (427)
391 KOG2040 Glycine dehydrogenase 97.9 0.0027 5.8E-08 63.4 21.5 311 34-407 97-450 (1001)
392 PF04864 Alliinase_C: Allinase 97.9 0.00042 9E-09 64.5 14.1 283 92-426 44-347 (363)
393 KOG2790 Phosphoserine aminotra 97.7 0.0062 1.3E-07 55.0 18.4 289 58-382 9-314 (370)
394 KOG1403 Predicted alanine-glyo 96.6 0.1 2.2E-06 47.8 14.4 266 119-422 104-413 (452)
395 KOG1405 4-aminobutyrate aminot 96.5 0.16 3.4E-06 47.7 15.2 182 191-407 254-450 (484)
396 PLN02994 1-aminocyclopropane-1 96.3 0.037 8E-07 46.5 9.6 63 87-165 88-152 (153)
397 COG2515 Acd 1-aminocyclopropan 69.6 55 0.0012 30.7 10.0 133 92-249 48-191 (323)
398 PF13407 Peripla_BP_4: Peripla 62.7 47 0.001 29.9 8.6 65 167-243 20-85 (257)
399 cd01422 MGS Methylglyoxal synt 58.8 89 0.0019 24.7 8.3 76 156-243 29-106 (115)
400 COG0031 CysK Cysteine synthase 57.3 45 0.00097 31.3 7.2 83 120-214 65-148 (300)
401 PF02310 B12-binding: B12 bind 57.2 91 0.002 24.3 9.1 73 166-249 19-92 (121)
402 cd01455 vWA_F11C1-5a_type Von 56.8 21 0.00046 31.1 4.7 34 204-243 114-147 (191)
403 PF02603 Hpr_kinase_N: HPr Ser 55.6 15 0.00031 29.8 3.4 45 189-245 64-112 (127)
404 COG1954 GlpP Glycerol-3-phosph 55.1 19 0.00042 30.5 4.0 50 191-249 12-61 (181)
405 COG0552 FtsY Signal recognitio 53.6 59 0.0013 31.0 7.4 94 156-249 170-271 (340)
406 PRK14994 SAM-dependent 16S rib 50.2 1.4E+02 0.003 28.0 9.4 79 155-242 39-117 (287)
407 COG0296 GlgB 1,4-alpha-glucan 49.9 12 0.00027 38.8 2.5 39 206-250 201-239 (628)
408 COG2870 RfaE ADP-heptose synth 49.9 35 0.00077 33.2 5.3 79 158-245 95-178 (467)
409 PLN02672 methionine S-methyltr 49.4 4.4E+02 0.0095 29.9 14.4 148 74-246 408-565 (1082)
410 PRK05234 mgsA methylglyoxal sy 46.0 1.6E+02 0.0034 24.3 8.1 78 156-247 34-115 (142)
411 PF05368 NmrA: NmrA-like famil 45.1 1.6E+02 0.0036 26.0 9.0 76 155-243 24-99 (233)
412 TIGR03573 WbuX N-acetyl sugar 43.6 3.1E+02 0.0066 26.4 11.6 102 119-249 62-171 (343)
413 PLN02556 cysteine synthase/L-3 43.3 2.5E+02 0.0053 27.4 10.3 83 120-215 114-196 (368)
414 TIGR00288 conserved hypothetic 42.2 1.6E+02 0.0034 24.9 7.5 77 156-245 60-136 (160)
415 COG1105 FruK Fructose-1-phosph 41.7 65 0.0014 30.5 5.7 55 188-248 109-169 (310)
416 COG0027 PurT Formate-dependent 41.2 80 0.0017 29.8 6.0 83 154-247 75-158 (394)
417 COG1504 Uncharacterized conser 40.3 65 0.0014 25.1 4.5 48 188-243 47-94 (121)
418 COG2099 CobK Precorrin-6x redu 40.0 68 0.0015 29.3 5.3 53 189-247 11-75 (257)
419 PLN03013 cysteine synthase 39.8 1.5E+02 0.0033 29.5 8.3 53 120-184 178-230 (429)
420 COG1004 Ugd Predicted UDP-gluc 37.0 2.6E+02 0.0057 27.4 9.1 66 338-411 282-351 (414)
421 PRK08057 cobalt-precorrin-6x r 36.8 83 0.0018 28.8 5.6 27 215-247 48-74 (248)
422 cd06305 PBP1_methylthioribose_ 35.5 1.7E+02 0.0037 26.3 7.7 67 167-245 21-88 (273)
423 PF04309 G3P_antiterm: Glycero 34.9 9.5 0.00021 32.7 -0.8 47 194-249 11-57 (175)
424 TIGR02026 BchE magnesium-proto 33.5 1.4E+02 0.003 30.5 7.2 70 171-249 32-103 (497)
425 PF00403 HMA: Heavy-metal-asso 32.9 1.5E+02 0.0033 19.8 6.3 52 348-404 10-61 (62)
426 cd06535 CIDE_N_CAD CIDE_N doma 30.4 1.2E+02 0.0027 22.0 4.4 50 166-216 26-77 (77)
427 cd01561 CBS_like CBS_like: Thi 30.2 3.4E+02 0.0073 25.2 8.8 53 120-184 56-108 (291)
428 PRK08329 threonine synthase; V 30.1 3.7E+02 0.008 25.9 9.2 52 120-183 107-158 (347)
429 cd06282 PBP1_GntR_like_2 Ligan 29.8 2.7E+02 0.0059 24.7 8.0 63 167-242 21-83 (266)
430 PLN02565 cysteine synthase 29.4 2.9E+02 0.0063 26.3 8.2 52 120-183 70-121 (322)
431 cd06319 PBP1_ABC_sugar_binding 29.4 2.4E+02 0.0052 25.4 7.6 65 167-243 21-85 (277)
432 COG1606 ATP-utilizing enzymes 29.3 2.7E+02 0.0059 25.5 7.3 96 120-248 21-123 (269)
433 TIGR01139 cysK cysteine syntha 28.8 3.7E+02 0.0079 25.1 8.8 52 120-183 60-111 (298)
434 PF02571 CbiJ: Precorrin-6x re 28.7 89 0.0019 28.6 4.4 27 215-247 49-75 (249)
435 cd06300 PBP1_ABC_sugar_binding 28.6 2.3E+02 0.0051 25.5 7.4 67 167-245 21-93 (272)
436 smart00642 Aamy Alpha-amylase 28.6 46 0.00099 28.3 2.4 30 214-249 65-94 (166)
437 TIGR01275 ACC_deam_rel pyridox 28.1 1.4E+02 0.0031 28.1 5.9 55 120-183 58-113 (311)
438 PF00128 Alpha-amylase: Alpha 27.6 44 0.00094 31.0 2.3 34 210-249 43-76 (316)
439 cd01542 PBP1_TreR_like Ligand- 27.5 3.3E+02 0.0071 24.2 8.1 63 167-243 21-83 (259)
440 COG1066 Sms Predicted ATP-depe 27.3 4.2E+02 0.0091 26.3 8.7 80 155-243 122-215 (456)
441 TIGR01536 asn_synth_AEB aspara 27.2 6.1E+02 0.013 25.4 10.6 127 93-247 235-365 (467)
442 COG2102 Predicted ATPases of P 26.7 4.5E+02 0.0097 23.6 8.1 99 120-241 4-115 (223)
443 cd01538 PBP1_ABC_xylose_bindin 26.5 3.2E+02 0.0069 25.0 8.0 64 167-242 21-84 (288)
444 COG3453 Uncharacterized protei 26.3 2.8E+02 0.006 22.2 6.0 69 161-231 44-125 (130)
445 cd06318 PBP1_ABC_sugar_binding 26.1 3.5E+02 0.0076 24.4 8.2 67 167-245 21-88 (282)
446 KOG0369 Pyruvate carboxylase [ 26.0 70 0.0015 33.4 3.4 34 211-251 164-197 (1176)
447 cd06322 PBP1_ABC_sugar_binding 26.0 3E+02 0.0065 24.6 7.6 66 167-244 21-87 (267)
448 PRK05096 guanosine 5'-monophos 25.8 5.1E+02 0.011 24.9 8.8 22 219-246 200-221 (346)
449 TIGR02634 xylF D-xylose ABC tr 25.6 2.4E+02 0.0051 26.2 6.9 66 166-243 19-84 (302)
450 TIGR01305 GMP_reduct_1 guanosi 25.3 4.1E+02 0.0089 25.5 8.1 53 189-247 158-221 (343)
451 PRK05638 threonine synthase; V 24.9 7.1E+02 0.015 24.9 12.6 51 120-182 115-165 (442)
452 PRK03910 D-cysteine desulfhydr 24.7 2.7E+02 0.0058 26.6 7.1 56 120-184 66-129 (331)
453 cd01137 PsaA Metal binding pro 24.0 2.6E+02 0.0056 26.1 6.7 65 163-241 183-252 (287)
454 TIGR00177 molyb_syn molybdenum 23.7 3.3E+02 0.0071 22.3 6.6 55 165-224 30-87 (144)
455 cd01615 CIDE_N CIDE_N domain, 23.6 2.5E+02 0.0054 20.5 5.0 51 163-213 23-75 (78)
456 COG2052 Uncharacterized protei 23.4 1.5E+02 0.0033 21.3 3.7 33 204-249 18-50 (89)
457 cd01575 PBP1_GntR Ligand-bindi 23.3 5.1E+02 0.011 23.0 8.6 63 167-243 21-83 (268)
458 TIGR00096 probable S-adenosylm 23.2 6E+02 0.013 23.6 8.8 81 155-243 26-106 (276)
459 COG1184 GCD2 Translation initi 23.1 6.4E+02 0.014 23.8 13.7 100 120-245 122-228 (301)
460 PRK00685 metal-dependent hydro 23.0 5.2E+02 0.011 22.7 9.6 75 156-231 136-213 (228)
461 PF01008 IF-2B: Initiation fac 23.0 6E+02 0.013 23.4 10.0 102 120-247 110-219 (282)
462 PF00532 Peripla_BP_1: Peripla 22.8 4.3E+02 0.0093 24.3 8.0 77 156-246 5-88 (279)
463 PF14606 Lipase_GDSL_3: GDSL-l 22.5 3.8E+02 0.0083 23.1 6.8 46 168-214 26-71 (178)
464 PF09419 PGP_phosphatase: Mito 22.1 2.3E+02 0.005 24.1 5.4 80 154-242 18-110 (168)
465 PF00289 CPSase_L_chain: Carba 22.1 3.9E+02 0.0084 20.8 6.9 57 167-231 17-73 (110)
466 PRK09441 cytoplasmic alpha-amy 22.0 64 0.0014 32.7 2.4 32 212-249 74-105 (479)
467 PF05687 DUF822: Plant protein 21.9 2.4E+02 0.0052 23.3 5.1 45 345-408 20-64 (150)
468 TIGR00064 ftsY signal recognit 21.8 5.2E+02 0.011 23.9 8.2 76 167-248 119-203 (272)
469 TIGR02964 xanthine_xdhC xanthi 21.8 4.4E+02 0.0096 24.0 7.6 73 154-231 100-186 (246)
470 PRK05428 HPr kinase/phosphoryl 21.7 1.6E+02 0.0035 27.8 4.7 41 194-246 74-114 (308)
471 cd01744 GATase1_CPSase Small c 21.6 4.6E+02 0.01 22.2 7.4 43 162-212 7-49 (178)
472 TIGR01138 cysM cysteine syntha 21.6 4E+02 0.0087 24.8 7.5 53 120-184 62-114 (290)
473 cd06317 PBP1_ABC_sugar_binding 21.6 4.6E+02 0.01 23.4 8.0 64 167-242 22-85 (275)
474 cd06281 PBP1_LacI_like_5 Ligan 21.1 5.1E+02 0.011 23.1 8.2 64 167-243 21-84 (269)
475 PLN00011 cysteine synthase 20.9 5.9E+02 0.013 24.1 8.6 52 120-183 72-123 (323)
476 cd05126 Mth938 Mth938 domain. 20.7 2.8E+02 0.0061 22.0 5.3 47 189-243 45-91 (117)
477 cd06320 PBP1_allose_binding Pe 20.7 4.3E+02 0.0094 23.7 7.6 66 167-243 21-87 (275)
478 PRK11761 cysM cysteine synthas 20.7 5E+02 0.011 24.3 8.0 52 120-183 66-117 (296)
479 TIGR00679 hpr-ser Hpr(Ser) kin 20.4 1.7E+02 0.0038 27.5 4.7 41 194-246 74-114 (304)
480 TIGR02402 trehalose_TreZ malto 20.2 74 0.0016 32.9 2.4 34 210-249 151-184 (542)
481 cd00640 Trp-synth-beta_II Tryp 20.1 4.9E+02 0.011 23.2 7.7 29 155-183 76-104 (244)
No 1
>PLN02590 probable tyrosine decarboxylase
Probab=100.00 E-value=2.3e-58 Score=458.33 Aligned_cols=399 Identities=16% Similarity=0.188 Sum_probs=336.3
Q ss_pred ccccccCchhhhhcCCCCCCCCCCCCHHHHHHHHHHhhc----cCCCCCccccccccCCChH--HHHHHHHHHcCcCCCC
Q 014163 13 ILSSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELM----LDGNPRLNLASFVTTWMEP--ECDKLVMASINKNYVD 86 (429)
Q Consensus 13 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 86 (429)
-+-+...+++++..++. ++|+.|.+++++++++.+.+. .+.||.| ++|+++.+.+ .+.|++..++|++.+.
T Consensus 85 pv~~~~~p~~l~~~l~~-~~P~~g~~~~~il~~~~~~i~p~~~~~~hP~f--~a~~~~~~~~~~~lgd~l~sa~n~~~~~ 161 (539)
T PLN02590 85 PVLSQVQPGYLRDMLPD-SAPERPESLKELLDDVSKKIMPGITHWQSPSY--FAYYASSTSVAGFLGEMLNAGLSVVGFT 161 (539)
T ss_pred CCCCCCChHHHHHhcCC-CCCCCCCCHHHHHHHHHHHHhccCCcCCCCCe--eEeccCCCcHHHHHHHHHHHhcccccCC
Confidence 44556788999999997 999999999999999988665 3679987 6778876644 3889999999999999
Q ss_pred CccChhhHHHHHHHHHHHHHhhCCCCCCC--CCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCc
Q 014163 87 MDEYPVTTELQNRCVNMIAHLFNTPVADD--KTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQ 164 (429)
Q Consensus 87 ~~~~~~~~~le~~~~~~la~l~g~~~~~~--~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h 164 (429)
|..+|+.+++|+++++|+++++|++..+. ....|++|+|||+||++++.++|++..++....+ ..+..|++|+.+|
T Consensus 162 ~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~--~~~~vvy~S~~aH 239 (539)
T PLN02590 162 WLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTL--LPQLVVYGSDQTH 239 (539)
T ss_pred cccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccC--CCCEEEEecCCch
Confidence 99999999999999999999999986321 0145899999999999999999987653321111 2234788999999
Q ss_pred hHHHHHHHhcCce---eEEEeccC-CccccCHHHHHHHhhhC------CeEEEEeeCCCccccccChHHHHHHHHHhhhc
Q 014163 165 VCWEKFARYFEVE---LKEVKLEE-GYYVMNPVKAVELVDEN------TICVAAILGSTLTGEFEDVKLLHDLLTKKNEE 234 (429)
Q Consensus 165 ~s~~~~~~~~G~~---v~~v~~~~-~~~~~d~~~l~~~i~~~------~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~ 234 (429)
+|+.|+|+++|++ ++.||+|. ++++||+++|+++|.++ |.+|+.+.|||.+|++||+++|+++|++|
T Consensus 240 ~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~--- 316 (539)
T PLN02590 240 SSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKY--- 316 (539)
T ss_pred HHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHh---
Confidence 9999999999994 89999984 35899999999999763 68999999999999999999999999999
Q ss_pred cCCCccEEeecccccccccccCCCCcc-ccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCC---
Q 014163 235 TGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSD--- 310 (429)
Q Consensus 235 ~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~--- 310 (429)
++|+|||||||++++ +.++.+. ..+++.+||+++++|||++.|++||++++|++..+...+...+.|+...
T Consensus 317 ---g~WlHVDaA~GG~al--~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~~~~l~~a~~~~~~YL~~~~~~ 391 (539)
T PLN02590 317 ---GIWLHVDAAYAGNAC--ICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKDRYSLIDALKTNPEYLEFKVSK 391 (539)
T ss_pred ---CCeEEEecchhhhhh--cChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecCHHHHHHHhhcCHHHhCCcccc
Confidence 999999999999765 5555543 3378899999999999999999999999998766655555566666421
Q ss_pred ------CCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCC
Q 014163 311 ------QPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSS 384 (429)
Q Consensus 311 ------~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~ 384 (429)
...+++++||+ +..+++|++|+.+|.+|+++++++..+++++|.+.|++.++|+++.++ .+++|||++.++.
T Consensus 392 ~~~~~d~~d~~i~lsRr-~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~-~l~iVcFr~~~~~ 469 (539)
T PLN02590 392 KDTVVNYKDWQISLSRR-FRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTR-YFSLVCFRLAPVD 469 (539)
T ss_pred cccCCCccccCCCCCCc-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-ceEEEEEEecCCC
Confidence 23467888998 689999999999999999999999999999999999999999999886 7999999997642
Q ss_pred --CCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEecccc
Q 014163 385 --AHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLRR 428 (429)
Q Consensus 385 --~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~~ 428 (429)
....++++++|.++|++.|.... .++.+.++.+||+|+++++
T Consensus 470 ~~~~~~~~ln~~l~~~l~~~G~~~v--s~t~~~g~~~lR~~i~n~~ 513 (539)
T PLN02590 470 GDEDQCNERNRELLAAVNSTGKIFI--SHTALSGKFVLRFAVGAPL 513 (539)
T ss_pred CCHHHHHHHHHHHHHHHHhCCCEEE--EeeEECCEEEEEEEecCCC
Confidence 12357889999999999998854 5677899999999999986
No 2
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=100.00 E-value=2.3e-55 Score=429.62 Aligned_cols=401 Identities=59% Similarity=1.050 Sum_probs=336.1
Q ss_pred cCchhhhhcCCCCCCCCCCCCHHHHHHHHHHhhcc--CCCCCccccccccCCChHHHHHHHHHHcCcCCCCCccChhhHH
Q 014163 18 FASRYVRAAIPRFKMPDNSMPKEAAYQVINDELML--DGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTE 95 (429)
Q Consensus 18 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (429)
.|+......+++.++|++|.+.+++++.+...+-. +.||.+ ++|+++++.|.+.+++..++++|.++|..++...+
T Consensus 3 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~iyld~~a~~~~--~~~~tt~~~p~~~~~~~~~l~~~~~np~s~~~~~~ 80 (431)
T TIGR01788 3 YGSRAVSTGIPKYRMPEEEMPPDAAYQLIHDELSLDGNPRLNL--ATFVTTWMEPEARKLMDETINKNMIDKDEYPQTAE 80 (431)
T ss_pred ccccccccCCCcccCCCCCCCHHHHHHHHHHHhhhcCCcceee--eeeeCCCCCHHHHHHHHHHHhcCCCCcccCccHHH
Confidence 36667777888889999999999999999887654 445654 89999898999999999999999888888888889
Q ss_pred HHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcC
Q 014163 96 LQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFE 175 (429)
Q Consensus 96 le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G 175 (429)
+|+++++|+++++|++... +...+++|+||||||++++.+++.++..+.+..|....++.|++|+.+|+|+.++++.+|
T Consensus 81 le~~~~~~la~llg~~~~~-~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg 159 (431)
T TIGR01788 81 IENRCVNMLADLWHAPAKD-AEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFD 159 (431)
T ss_pred HHHHHHHHHHHHhCCCCCC-CCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcC
Confidence 9999999999999997210 124567799999999999999876543322223332234689999999999999999999
Q ss_pred ceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeeccccccccccc
Q 014163 176 VELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (429)
Q Consensus 176 ~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (429)
++++.||++++++.+|+++|+++|+++|.+|+++++||.+|.+||+++|+++|+++++.++.++|+|||+||+++.+++.
T Consensus 160 ~~v~~i~~d~~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~ 239 (431)
T TIGR01788 160 VELREVPMDPGRYVIDPEQVVEAVDENTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFIAPFV 239 (431)
T ss_pred ceeEEEecCCCceeeCHHHHHHHHhhCCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHHHHHh
Confidence 99999999874468999999999999999999999999999999999999999998322233699999999999888887
Q ss_pred CCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHc
Q 014163 256 YPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL 335 (429)
Q Consensus 256 ~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l 335 (429)
.++.+.++..+++||+++|+|||+++|.|+|++++|++..+...+...+.|+++.....+++++|++..+++.|+.++.+
T Consensus 240 ~~~~~~~~~~~~~DSis~s~HK~~~~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~l 319 (431)
T TIGR01788 240 YPDLEWDFRLPRVKSINVSGHKYGLVYPGVGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRL 319 (431)
T ss_pred CCCchhhcCCCCceEEEECchhccCCCCCcEEEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHh
Confidence 77777888788999999999999999999999999987545455555677887655556788999887888999999999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCC--CCCHHHHHHHHHHHHhccCceeccc-CCC
Q 014163 336 GFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSS--AHTVFEISEGLRKKLNRFQVVYPQK-LPM 412 (429)
Q Consensus 336 ~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~--~~~~~~~~~~L~~~l~~~G~~~~~~-~~~ 412 (429)
|.+|++++++++.+++++|.++|++.|+++++.+++.++++||++++.. ..+..++.+.|. ++|+.+..+ .|.
T Consensus 320 G~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~Fr~~~~~~~~~~~~~l~~~L~----~~G~~~~~~~~p~ 395 (431)
T TIGR01788 320 GREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAFKLKDDADPGYTLYDLSHRLR----ERGWIVPAYTLPK 395 (431)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEEEeCCCCCCCcCHHHHHHHHH----HCCCcccCCCCCC
Confidence 9999999999999999999999999999999987237999999997532 245556666666 999988777 777
Q ss_pred CCCCceEEEEEec
Q 014163 413 SYPWSTKLRVISH 425 (429)
Q Consensus 413 ~~~~~~~lRi~~~ 425 (429)
...|..++|+++.
T Consensus 396 ~~~~~~~lR~~~~ 408 (431)
T TIGR01788 396 NAEDIVVMRIVVR 408 (431)
T ss_pred ccCCeEEEEEEec
Confidence 7889999999985
No 3
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=4.3e-54 Score=421.20 Aligned_cols=363 Identities=39% Similarity=0.614 Sum_probs=319.9
Q ss_pred CCCCCCCCHHHHHHHHHHhhcc-----CCCCCccccccccCCChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHH
Q 014163 31 KMPDNSMPKEAAYQVINDELML-----DGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIA 105 (429)
Q Consensus 31 ~~p~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la 105 (429)
.+|+.+.+.++++.++...... ++||..+...+++..+++.+.+++..++++|..+|+.+|++.++|+++..|++
T Consensus 32 ~~p~~g~p~~~v~~~l~~~~~~d~~~~~~~p~~~~~~~~~~~~~~~a~~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~ 111 (460)
T COG0076 32 MAPEKGEPLEEVLDELAELLIKDELYLDGHPRANLAGFCPTRVPPVAAELLVSALNKNLGDPDESPAAAELEERVVNMLS 111 (460)
T ss_pred cCCccCCchhhHHHHHHHHhhcccccccCCcceEEEccCCCCCHHHHHHHHHHHHhhcCCCcccChhHHHHHHHHHHHHH
Confidence 6778888888888888776432 56888878888888888889999999999999999999999999999999999
Q ss_pred HhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHh-cCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEecc
Q 014163 106 HLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE-QGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (429)
Q Consensus 106 ~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~-~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~ 184 (429)
+++|.+.. ..|++|+||||||+++++++++++.+.... .+...+.|+||+|..+|+|+.|+++++|++++.+|++
T Consensus 112 ~l~~~~~~----~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~ 187 (460)
T COG0076 112 DLLGAPEE----ASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTV 187 (460)
T ss_pred HHhCCCCC----CceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEec
Confidence 99999742 569999999999999999999998765433 3444456899999999999999999999999999998
Q ss_pred CCccccCHHHHHHHhhhCCeE--EEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccc
Q 014163 185 EGYYVMNPVKAVELVDENTIC--VAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD 262 (429)
Q Consensus 185 ~~~~~~d~~~l~~~i~~~~~~--v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~ 262 (429)
+++.+||+++|+++|++++.. |+.+.|+|++|.+||+++|+++|+++ ++|+|||||+||++++|..+...++
T Consensus 188 ~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~------~i~lHVDAA~GG~~~pf~~~~~~~~ 261 (460)
T COG0076 188 PTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDDIEELADIAEEY------GIWLHVDAAFGGFLLPFLEPDGRWD 261 (460)
T ss_pred cCccccCHHHHHHHHHhhccCceEEEEecCCCCCccCCHHHHHHHHHHc------CCcEEEEccccceeecccCccchhh
Confidence 745899999999999999987 99999999999999999999999999 9999999999999999988887788
Q ss_pred cCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCC-CCCCceeccCCchhHHHHHHHHHHHcCHHHHH
Q 014163 263 FRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGS-DQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYK 341 (429)
Q Consensus 263 ~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~ 341 (429)
++++++||+++|+|||+++|.|||++++|+++.+.+.+.....|+.+ ...++++.+||++..++++|+.++.+|.+||+
T Consensus 262 f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~ 341 (460)
T COG0076 262 FGLEGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYR 341 (460)
T ss_pred cCCCCceEEEECcccccCCCCCceEEEEECHHHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHH
Confidence 99999999999999999999999999999987776766666777776 56788899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceeccc
Q 014163 342 NIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK 409 (429)
Q Consensus 342 ~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~ 409 (429)
++++++.++++++.+.|++.+.++++.+| .+++|||++++..+ ...+....+. +.|+.+..+
T Consensus 342 ~l~~~~~~~a~~la~~l~~~~~~e~~~~p-~l~~V~fr~~~~~~-~~~~~~~~~~----~~gw~v~~~ 403 (460)
T COG0076 342 KLLDRTLELARYLAEELEKLGDFELVNEP-ELPIVAFRLKDDED-TLADLSERLD----RRGWQVPAQ 403 (460)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcEeecCC-ccceEEEEcCCccc-chhchHHHHH----hcCceeecc
Confidence 99999999999999999999889999987 79999999954221 1333444444 889988765
No 4
>PLN02880 tyrosine decarboxylase
Probab=100.00 E-value=2.1e-54 Score=430.43 Aligned_cols=398 Identities=16% Similarity=0.214 Sum_probs=326.0
Q ss_pred cccccCchhhhhcCCCCCCCCCCCCHHHHHHHHHHhhc----cCCCCCccccccccCCChH--HHHHHHHHHcCcCCCCC
Q 014163 14 LSSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELM----LDGNPRLNLASFVTTWMEP--ECDKLVMASINKNYVDM 87 (429)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 87 (429)
+.+...+++++..++. ++|+.+.+.+++++++.+.+. .++||.| .+++++.+.+ .+.|++..++|++...|
T Consensus 38 v~~~~~p~~l~~~~~~-~~p~~~~~~~~~l~~~~~~i~~~~~~~~hP~f--~~~~~~~~~~~~~lad~l~~~~n~~~~~~ 114 (490)
T PLN02880 38 VLSQVQPGYLRELLPD-SAPNQPETLDQVLDDVQAKILPGVTHWQSPNY--FAYYPSNSSVAGFLGEMLSAGLNIVGFSW 114 (490)
T ss_pred CCCCCCHHHHHHhccc-cCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCe--eEeccCCCcHHHHHHHHHHHhhccCCccc
Confidence 4556778999999987 899999999999999988665 3678987 6677665543 38899999999999999
Q ss_pred ccChhhHHHHHHHHHHHHHhhCCCCCCC--CCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCch
Q 014163 88 DEYPVTTELQNRCVNMIAHLFNTPVADD--KTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQV 165 (429)
Q Consensus 88 ~~~~~~~~le~~~~~~la~l~g~~~~~~--~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~ 165 (429)
..+|..+++|+++.+|+++++|++.++. ....|++|+|||+||++++.++|++........+ ..+..|++|+.+|+
T Consensus 115 ~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~--~~~~vv~~S~~aH~ 192 (490)
T PLN02880 115 ITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNA--LEKLVVYASDQTHS 192 (490)
T ss_pred ccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccc--cCCeEEEEcCCchH
Confidence 9999999999999999999999986321 0135899999999999999999987653321111 12357889999999
Q ss_pred HHHHHHHhcCce---eEEEeccC-CccccCHHHHHHHhhhC------CeEEEEeeCCCccccccChHHHHHHHHHhhhcc
Q 014163 166 CWEKFARYFEVE---LKEVKLEE-GYYVMNPVKAVELVDEN------TICVAAILGSTLTGEFEDVKLLHDLLTKKNEET 235 (429)
Q Consensus 166 s~~~~~~~~G~~---v~~v~~~~-~~~~~d~~~l~~~i~~~------~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~ 235 (429)
|+.|+++++|++ ++.||+++ ++++||+++|+++|+++ |.+|+.+.|+|.+|.+||+++|+++|++|
T Consensus 193 Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~---- 268 (490)
T PLN02880 193 ALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSN---- 268 (490)
T ss_pred HHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHc----
Confidence 999999999996 88999984 35899999999999753 68899999999999999999999999999
Q ss_pred CCCccEEeecccccccccccCCCCcccc-CCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCC----
Q 014163 236 GWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSD---- 310 (429)
Q Consensus 236 ~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~---- 310 (429)
|+|+|||||||++++ ..++.+..+ +++++||+++++|||+++|.+||++++|++..+...+.....|+...
T Consensus 269 --~iwlHVDaA~gg~~~--~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~l~~~~~~~~~Yl~~~~~~~ 344 (490)
T PLN02880 269 --GMWFHVDAAYAGSAC--ICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNALIQSLSTNPEFLKNKASQA 344 (490)
T ss_pred --CCEEEEehhhHHHHH--hCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHHHHHHHHccCHHHhcCccccc
Confidence 999999999999754 444444344 56789999999999999999999999997654434444445554321
Q ss_pred -----CCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCC-
Q 014163 311 -----QPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSS- 384 (429)
Q Consensus 311 -----~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~- 384 (429)
...++++++|. +..+++|++++.+|.+|+++++++..++++++.+.|++.++++++.++ .++++||++++..
T Consensus 345 ~~~~~~~~~~i~~~rr-~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~-~~~iv~Fr~~~~~~ 422 (490)
T PLN02880 345 NSVVDYKDWQIPLGRR-FRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPR-IFSLVCFRLVPPKN 422 (490)
T ss_pred cCCCChhccCcCCCCc-ccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCC-ceEEEEEEEeCCCC
Confidence 12345667776 578999999999999999999999999999999999999999999876 7999999997531
Q ss_pred -CCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEecccc
Q 014163 385 -AHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLRR 428 (429)
Q Consensus 385 -~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~~ 428 (429)
....+++++.|.++|++.|.+.. .++.+.++.+||+|+++++
T Consensus 423 ~~~~~~~~n~~l~~~l~~~g~~~v--~~t~~~g~~~lR~~~~n~~ 465 (490)
T PLN02880 423 NEDNGNKLNHDLLDAVNSSGKIFI--SHTVLSGKYVLRFAVGAPL 465 (490)
T ss_pred ChhhHHHHHHHHHHHHHhCCCEEE--EEEEECCEEEEEEEecCCC
Confidence 12457888999999999997754 3466788999999999876
No 5
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=100.00 E-value=3.8e-54 Score=415.31 Aligned_cols=348 Identities=28% Similarity=0.405 Sum_probs=290.0
Q ss_pred chhhhhcCCCCCCCCCCCCHHHHHHHHHHhhcc----CCCCCccccccccCCChH--HHHHHHHHHcCcCCCCCccChhh
Q 014163 20 SRYVRAAIPRFKMPDNSMPKEAAYQVINDELML----DGNPRLNLASFVTTWMEP--ECDKLVMASINKNYVDMDEYPVT 93 (429)
Q Consensus 20 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 93 (429)
|+.++++++. .+|+.|.+.+++++++.+.+.. +.||.| .+++++.+.+ .+.+++..++|+|...|..+|..
T Consensus 1 P~~l~~~~~~-~lp~~~~~~~~vl~~~~~~l~~~~~~~~~P~~--~~~~~~~~~~~~i~~~~l~~~~n~n~~~~~~~P~~ 77 (373)
T PF00282_consen 1 PGELRARLDE-ELPEEGESLEEVLKDLREILAPGVTHWHHPRF--FGFVPGGPSPASILADLLASALNQNGFTWEASPAA 77 (373)
T ss_dssp TTSSGGGCHC-CHHSSHH-HHHHHHHHHHHTHGCS-TTTSTTB--ESSSHT--CHHHHHHHHHHHHHT-BTTSTTTSHHH
T ss_pred ChhhhhcCcc-ccccCCCCHHHHHHHHHHHhhccCCCCCChhH--hhhccCCccHHHHHHHHHHhhhccccccccccccc
Confidence 5778888887 9999999999999999887653 567876 5777765544 38899999999999999999999
Q ss_pred HHHHHHHHHHHHHhhCCCCCCC--CCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCC-CCCcEEEEcCCCchHHHHH
Q 014163 94 TELQNRCVNMIAHLFNTPVADD--KTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKP-YDKPNIVTGANVQVCWEKF 170 (429)
Q Consensus 94 ~~le~~~~~~la~l~g~~~~~~--~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~-~~~~~vi~~~~~h~s~~~~ 170 (429)
+++|+++.+|+++++|++..+. ....|++|+|||+||+++++++|+++.++.+..|.. ..+++|++|+.+|+|+.++
T Consensus 78 ~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Ka 157 (373)
T PF00282_consen 78 TEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKA 157 (373)
T ss_dssp HHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHH
T ss_pred ccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHh
Confidence 9999999999999999994321 125699999999999999999999888776666644 4567999999999999999
Q ss_pred HHhcCceeEEEeccCCccccCHHHHHHHhhhC------CeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEee
Q 014163 171 ARYFEVELKEVKLEEGYYVMNPVKAVELVDEN------TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVD 244 (429)
Q Consensus 171 ~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD 244 (429)
|+++|++++.||++++ ++||+++|+++|.+. +.+|+.+.|||.+|.+||+++|+++|+++ ++|+|||
T Consensus 158 a~~lGlg~~~I~~~~~-~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~------~~wlHVD 230 (373)
T PF00282_consen 158 ARILGLGVRKIPTDED-GRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKY------NIWLHVD 230 (373)
T ss_dssp HHHTTSEEEEE-BBTT-SSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHC------T-EEEEE
T ss_pred cceeeeEEEEecCCcc-hhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhcccc------ceeeeec
Confidence 9999999999999985 899999999998752 45899999999999999999999999999 9999999
Q ss_pred cccccccccccCCCCc-cccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCC---------CCc
Q 014163 245 AASGGFIAPFLYPDLE-WDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQ---------PTF 314 (429)
Q Consensus 245 ~a~~~~~~~~~~~~~~-~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 314 (429)
|||||..+ +.+..+ ..++++++||+++|+|||+++|++||++++|++..+...+...+.|+.... ..+
T Consensus 231 aA~gg~~~--~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~ 308 (373)
T PF00282_consen 231 AAYGGSAL--LSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDY 308 (373)
T ss_dssp ETTGGGGG--GHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEG
T ss_pred cccccccc--ccccccccccccccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhcccccccccccccccc
Confidence 99998443 444444 345788999999999999999999999999998777666666788887432 346
Q ss_pred eeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEec
Q 014163 315 TLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLK 381 (429)
Q Consensus 315 ~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~ 381 (429)
+++||| ...++++|++++.+|.+|+++++++..+++++|.+.|++.++++++.++ .+++|||+++
T Consensus 309 tl~~SR-~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~-~~~~vcFr~k 373 (373)
T PF00282_consen 309 TLQGSR-RFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEP-DLNIVCFRYK 373 (373)
T ss_dssp SSSSSG-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTT-SSSEEEEEES
T ss_pred cccccc-cchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCC-CceEEEEEeC
Confidence 788999 6899999999999999999999999999999999999999999999876 7999999984
No 6
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=100.00 E-value=3.9e-51 Score=407.45 Aligned_cols=390 Identities=18% Similarity=0.269 Sum_probs=308.1
Q ss_pred hhcCCCCCCCCCCCCHHHHHHHHHHhhc----cCCCCCccccccccCCChHH---HHHHHHHHcCcCCCCCccChhhHHH
Q 014163 24 RAAIPRFKMPDNSMPKEAAYQVINDELM----LDGNPRLNLASFVTTWMEPE---CDKLVMASINKNYVDMDEYPVTTEL 96 (429)
Q Consensus 24 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l 96 (429)
+..++..++|+.|.+.+++++++.+.+. ++.||.| .+++++..++. +.+ +..++|+|...|..+|+.+++
T Consensus 54 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~hP~f--~g~~~~~~p~~~~~l~~-l~~~lN~n~~~~~~spa~t~l 130 (522)
T TIGR03799 54 EKDFSSAEIPEQPTFVSEHTQFLLDKLVAHSVHTASPSF--IGHMTSALPYFMLPLSK-LMVALNQNLVKIETSKAFTPL 130 (522)
T ss_pred hhcccccCCCCCCCChHHHHHHHHHHHHcCCCCCCCCCe--EEeccCCCchHHHHHHH-HHHHhcCCcceeecCcchHHH
Confidence 3456566899999999999999776553 3788987 56666642222 556 567899999999999999999
Q ss_pred HHHHHHHHHHhhCCCCC--------CCCCCCceEeCCchHHHHHHHHHHHHHHHHHH------HhcCCC-------CCCc
Q 014163 97 QNRCVNMIAHLFNTPVA--------DDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR------KEQGKP-------YDKP 155 (429)
Q Consensus 97 e~~~~~~la~l~g~~~~--------~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~------~~~g~~-------~~~~ 155 (429)
|+++.+|++++++..++ .++..+|++|+|||+||++|++++|++..+.. +.+|.. ..++
T Consensus 131 E~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~ 210 (522)
T TIGR03799 131 ERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGL 210 (522)
T ss_pred HHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccCCce
Confidence 99999999999963211 11235699999999999999999999754321 111211 1346
Q ss_pred EEEEcCCCchHHHHHHHhcCc---eeEEEeccCCccccCHHHHHHHhhh----C--CeEEEEeeCCCccccccChHHHHH
Q 014163 156 NIVTGANVQVCWEKFARYFEV---ELKEVKLEEGYYVMNPVKAVELVDE----N--TICVAAILGSTLTGEFEDVKLLHD 226 (429)
Q Consensus 156 ~vi~~~~~h~s~~~~~~~~G~---~v~~v~~~~~~~~~d~~~l~~~i~~----~--~~~v~~~~~~~~tG~~~~l~~I~~ 226 (429)
+|++|+.+|+|+.++++.+|+ +++.||+|++ ++||+++|+++|++ + +.+|+.+.++|.+|.+||+++|++
T Consensus 211 ~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~~-g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~ 289 (522)
T TIGR03799 211 AILVSERGHYSLGKAADVLGIGRDNLIAIKTDAN-NRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMAD 289 (522)
T ss_pred EEEECCCchHHHHHHHHHcCCCcccEEEEEeCCC-CcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHH
Confidence 899999999999999999999 6999999875 89999999999973 3 456677799999999999999999
Q ss_pred HHHHhhhccCCCccEEeecccccccccccCCCCcccc-CCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccC
Q 014163 227 LLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHIN 305 (429)
Q Consensus 227 la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~ 305 (429)
+|+++ |+|+||||||+++.+ ..++.+..+ +++++||+++|+|||+++|.|||++++|++..+ +.+.....
T Consensus 290 i~~~~------g~~lHVDaA~gg~~~--~~~~~r~~l~gle~aDSit~d~HK~l~~P~g~G~llvr~~~~~-~~~~~~~~ 360 (522)
T TIGR03799 290 IAQEL------GCHFHVDAAWGGATL--LSNTYRHLLKGIERADSVTIDAHKQLYVPMGAGMVLFKDPALM-SAIEHHAE 360 (522)
T ss_pred HHHHc------CCeEEEEchhhhHHH--hCHHHHHHhcCchhCCEEEEChhhcCCcCcccEEEEEeCHHHH-HHhccCcc
Confidence 99999 999999999998654 444444334 456899999999999999999999999987543 44444556
Q ss_pred CCCC----CCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEec
Q 014163 306 YLGS----DQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLK 381 (429)
Q Consensus 306 ~~~~----~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~ 381 (429)
|+.. ....++++|||++ ..+++|++++.+|.+|+++++++..+++++|.+.|++.++++++.++ .++++||++.
T Consensus 361 Yl~~~~~~d~~~~~legsR~~-~al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~el~~~p-~l~iv~Fr~~ 438 (522)
T TIGR03799 361 YILRKGSKDLGSHTLEGSRPG-MAMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFELVTEP-ELCLLTYRYV 438 (522)
T ss_pred hhcCCCCCccccceeecCcch-HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEecCC-CccEEEEEEe
Confidence 6521 1234678899985 56789999999999999999999999999999999999999999876 7999999987
Q ss_pred CCCC----------------CCHHHHHHHHHHHHhccCceeccc---CCCCCCCc--eEEEEEecccc
Q 014163 382 DSSA----------------HTVFEISEGLRKKLNRFQVVYPQK---LPMSYPWS--TKLRVISHLRR 428 (429)
Q Consensus 382 ~~~~----------------~~~~~~~~~L~~~l~~~G~~~~~~---~~~~~~~~--~~lRi~~~~~~ 428 (429)
+... ...++++++|++++++.|...... .+..+++. .+||+|++|++
T Consensus 439 p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~~~~~~g~~~~~lR~~~~np~ 506 (522)
T TIGR03799 439 PEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLTPAQYDHQPTVVFRVVLANPL 506 (522)
T ss_pred ChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEecccccCCCCcEEEEEEecCCC
Confidence 5321 124778899999999999776443 23334444 89999999986
No 7
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=9.6e-49 Score=363.06 Aligned_cols=394 Identities=20% Similarity=0.248 Sum_probs=338.3
Q ss_pred cccccCchhhhhcCCCCCCCCCCCCHHHHHHHHHHhhc----cCCCCCccccccccCCC--hHHHHHHHHHHcCcCCCCC
Q 014163 14 LSSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELM----LDGNPRLNLASFVTTWM--EPECDKLVMASINKNYVDM 87 (429)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 87 (429)
+.|-..|||++.++|. +.|+.+.++++++.++.++++ +|+||.| .+|+|+.. +..++|.+...++.-++.|
T Consensus 29 v~P~v~PGYl~~llP~-~aPe~pE~~~~Il~D~ekiI~PGitHw~hP~f--hAyfpa~~s~~siladmLs~~i~~vGFtW 105 (511)
T KOG0628|consen 29 VLPDVKPGYLRDLLPS-KAPEKPESWEDILGDLEKIIMPGITHWQHPHF--HAYFPAGNSYPSILADMLSGGIGCVGFTW 105 (511)
T ss_pred CCCCCCcchhhhhCCC-CCCCChhhHHHHHHHHHHHccCCCcccCCCce--eeEccCccchHHHHHHHHhccccccccee
Confidence 4577899999999998 999999999999999999887 3889987 67777653 3447888888888888899
Q ss_pred ccChhhHHHHHHHHHHHHHhhCCCCCC----CCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCC------CCcEE
Q 014163 88 DEYPVTTELQNRCVNMIAHLFNTPVAD----DKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPY------DKPNI 157 (429)
Q Consensus 88 ~~~~~~~~le~~~~~~la~l~g~~~~~----~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~------~~~~v 157 (429)
.++|+.++||..+++|+++++++|..+ .....|++..++|++++.++++++.+...+.++.-+.. .+-++
T Consensus 106 ~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~ 185 (511)
T KOG0628|consen 106 ASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVA 185 (511)
T ss_pred ecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheE
Confidence 999999999999999999999998743 12356788889999999999999987765543221111 12378
Q ss_pred EEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhC------CeEEEEeeCCCccccccChHHHHHHHHHh
Q 014163 158 VTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDEN------TICVAAILGSTLTGEFEDVKLLHDLLTKK 231 (429)
Q Consensus 158 i~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~~~~tG~~~~l~~I~~la~~~ 231 (429)
++|+.+|.|++++|...|++++.++.|++ +.|+.+.|+++|+++ |..+++|.|||.+.++|++++|..+|+++
T Consensus 186 Y~SDqahssveka~~i~~VklR~l~td~n-~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~elg~Vc~~~ 264 (511)
T KOG0628|consen 186 YCSDQAHSSVEKACLIAGVKLRALPTDEN-FGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEELGPVCREE 264 (511)
T ss_pred EecCcccchHHHhHhhcceeEEEeecccC-cCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHHHhcchhhhc
Confidence 89999999999999999999999999985 899999999999985 68899999999999999999999999999
Q ss_pred hhccCCCccEEeecccccccccccCCCCcccc-CCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCC
Q 014163 232 NEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSD 310 (429)
Q Consensus 232 ~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~ 310 (429)
++|+|||+||+| ..+.+++.+..+ +++.+||+.++.|||++....|+.+++++...+...+...+-|+.+.
T Consensus 265 ------glWLHVDAAYAG--sa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~ 336 (511)
T KOG0628|consen 265 ------GLWLHVDAAYAG--SAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHA 336 (511)
T ss_pred ------CEEEEeehhhcc--ccccCHHHHHHhhcchhhccccCChhheeEEeeeeecceeecCceeeeeeecChHhhcch
Confidence 999999999998 445888887655 78999999999999999999999999999877767666666676553
Q ss_pred C-------CCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCC
Q 014163 311 Q-------PTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDS 383 (429)
Q Consensus 311 ~-------~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~ 383 (429)
. ..+.++-+|. ++.+++|..++.+|.++++++++++.++++.+.+.+.+.+.|+++.+. ..+++|||.++.
T Consensus 337 ~~~~~~Dyrhwqipl~rR-fRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~-~lgLvcFRlk~~ 414 (511)
T KOG0628|consen 337 YQGSAPDYRHWQIPLGRR-FRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNKR-ILGLVCFRLKGD 414 (511)
T ss_pred hhccCCCccccccccccc-hhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeeccc-ccceeEEeecCC
Confidence 2 2345556665 699999999999999999999999999999999999999999999886 799999999864
Q ss_pred CCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEecccc
Q 014163 384 SAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLRR 428 (429)
Q Consensus 384 ~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~~ 428 (429)
++++++|.++||..|-+-. .|....|+++||.+|++++
T Consensus 415 -----N~~ne~Ll~~in~~g~i~l--~~~~l~gk~vlRf~V~s~~ 452 (511)
T KOG0628|consen 415 -----NEINEALLNRLNSSGRIHL--VPASLHGKFVLRFAVCSPL 452 (511)
T ss_pred -----cHHHHHHHHHHHhcCcEEE--EEeeecceEEEEEEecCCC
Confidence 6999999999999996632 5677899999999999875
No 8
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.5e-47 Score=356.29 Aligned_cols=399 Identities=46% Similarity=0.686 Sum_probs=354.8
Q ss_pred cccccCCccccccccCchhhhhcCCCCCCCCCCCCHHHHHHHHHHhhccCCCCCccccccccCCChHHHHHHHHHHcCc-
Q 014163 4 STTETDSREILSSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINK- 82 (429)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 82 (429)
..+|....+...+.+.+.+-++..+...+|..+.+.+++++.+.+..+.+++|..+..+|...+.++...+++...++.
T Consensus 28 i~~~~~~~k~~~~~~~~~~~~~~~~~~~lP~~gl~~d~v~~~i~~~~~ld~~~~~~~vS~~v~~~~~~~~~l~~~~~~k~ 107 (491)
T KOG1383|consen 28 IEKELNKVKDQLSTFMSRYDRQKMYFFTLPSKGLPKDAVLELINDELMLDGNPRLGLASGVVYWGEPELDKLIMEAYNKF 107 (491)
T ss_pred HHHHHhhhhhhhhhhhhhhhhccceeecCCCCCCCHHHHHHHHHHHhccCCCcccCeeeEEEecCCcchhhHHHHHHhhc
Confidence 3455666777778888888889998889999999999999999999999999988888988888888888888888888
Q ss_pred CCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCC
Q 014163 83 NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGAN 162 (429)
Q Consensus 83 ~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~ 162 (429)
|+.+.+.+|+..++|.++.++++.+|+.+++ ..+..|+|+||++.++.+..+++ ++++ +++.+|+++.+..
T Consensus 108 N~l~~d~fp~~~~~e~~~Vnm~~~L~~~~~~----~~g~~t~G~Ses~l~~~k~~~~~----r~~~-k~I~~p~iv~~~~ 178 (491)
T KOG1383|consen 108 NPLHPDEFPVVRKLEAECVNMIANLFNAPSD----SCGCGTVGGSESGLAAKKSYRNR----RKAQ-KGIDKPNIVTPQN 178 (491)
T ss_pred CccCccccchhHHHHHHHHHHHHHHhcCCcc----ccCccccccchHHHHHHHHHHHH----HHhc-cCCCCccccchHH
Confidence 8888999999999999999999999999853 57999999999976666655543 3333 5667899999999
Q ss_pred CchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHH-hhhccCCCccE
Q 014163 163 VQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTK-KNEETGWDTPI 241 (429)
Q Consensus 163 ~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~-~~~~~~~~~~l 241 (429)
.|.+|+++++.++++++.||++++++++|+.++.+.++++|++++...|++|+|.++|+++|.++..+ + ++++
T Consensus 179 v~~a~eK~a~yf~v~l~~V~~~~~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~e~ve~l~~l~~e~w------~ipi 252 (491)
T KOG1383|consen 179 VHAAFEKAARYFEVELREVPLDEGDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEIEDVEKLADLLLEIW------DIPI 252 (491)
T ss_pred HHHHHHHHHhhEEEEEEeeeccccceEecHHHHHHHhccceEEEEEEcCCCCccchhhHHHHHHHHHHHh------CCce
Confidence 99999999999999999999998779999999999999999999999999999999999999999999 9 9999
Q ss_pred Eeeccccccccc-ccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCC
Q 014163 242 HVDAASGGFIAP-FLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSK 320 (429)
Q Consensus 242 ~vD~a~~~~~~~-~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr 320 (429)
|||++.|+|+.| ...+..+++|..+++-+++.++||++++|.|+|+++.|+++++...+....+|.++..+++++.|||
T Consensus 253 HvDa~~GgFi~p~~~~~~~~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR 332 (491)
T KOG1383|consen 253 HVDACLGGFINPAGYLNEEEFDFRVPGVTSISADGHKYGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSR 332 (491)
T ss_pred eecccCccccccccccCccccccCCCCceeEeeccceeeeeecCcEEEEEcccccccceEEEeccccCccccCcccccCC
Confidence 999999999887 4555668899999999999999999999999999999999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHh
Q 014163 321 GSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLN 400 (429)
Q Consensus 321 ~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~ 400 (429)
++..++++|+++-.+|.+||.+..+++.+.+.+|++.|++++++.++++| . ++|...+....+..++.+.|+
T Consensus 333 ~g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp-~---vs~~~~~s~~~~i~elsd~l~---- 404 (491)
T KOG1383|consen 333 PGSQVAAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKP-L---VSFILFGSNDVNIFELSDLLR---- 404 (491)
T ss_pred cccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCC-c---EEEEEccCCccchhhhhHHHH----
Confidence 99999999999999999999999999999999999999999999999875 3 444444444678889999999
Q ss_pred ccCceecccCCCCCCCceEEEEEec
Q 014163 401 RFQVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 401 ~~G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
+.||.+..+..+...|...+|+.+.
T Consensus 405 ~~GW~lnalq~P~a~Hi~vt~~~~~ 429 (491)
T KOG1383|consen 405 KKGWILNALQFPAAIHICVTRVHAR 429 (491)
T ss_pred hcCcCccccCCCCceEEEEEeeecc
Confidence 9999999884344677788887664
No 9
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=100.00 E-value=1.6e-45 Score=369.59 Aligned_cols=354 Identities=16% Similarity=0.221 Sum_probs=278.2
Q ss_pred CCCCCCCCHHHHHHHHHHhhcc----CCCC-CccccccccCCC-hHH-HHHHHHHHcCcCCCCCccChhhHHHHHHHHHH
Q 014163 31 KMPDNSMPKEAAYQVINDELML----DGNP-RLNLASFVTTWM-EPE-CDKLVMASINKNYVDMDEYPVTTELQNRCVNM 103 (429)
Q Consensus 31 ~~p~~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~ 103 (429)
.+.....+.+++++++.+.+.. +.|| +| .++.++.+ .|. +++++...+|+|...|+.+|+++.+|+++.+|
T Consensus 54 ~~~~~~~~~~~~l~~l~~~l~~~sv~~~~P~ry--~ghm~~~~~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~ 131 (608)
T TIGR03811 54 SFTKTVNNMKDVLDELSSRLRTESVPWHSAGRY--WGHMNSETLMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKE 131 (608)
T ss_pred ccccCccCHHHHHHHHHHHHhcCCCCCCCccce--EEECcCCCCHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHH
Confidence 3444555788899998886642 4677 66 45554444 344 78999999999999999999999999999999
Q ss_pred HHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHH-HH---HH-H--------------------------------
Q 014163 104 IAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKW-QQ---KR-K-------------------------------- 146 (429)
Q Consensus 104 la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~-~~---~~-~-------------------------------- 146 (429)
+++++|++. .+|++|+|||+||+.+++++|+.. .+ +. .
T Consensus 132 la~l~G~~~-----~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~ 206 (608)
T TIGR03811 132 FATLMGYKN-----GWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQID 206 (608)
T ss_pred HHHHhCCCC-----CCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccccccccccccchh
Confidence 999999985 469999999999999999999853 11 00 0
Q ss_pred -------hcCCCCCCc-EEEEcCCCchHHHHHHHhcCce---eEEEeccCCccccCHHHHHHHhhhC------CeEEEEe
Q 014163 147 -------EQGKPYDKP-NIVTGANVQVCWEKFARYFEVE---LKEVKLEEGYYVMNPVKAVELVDEN------TICVAAI 209 (429)
Q Consensus 147 -------~~g~~~~~~-~vi~~~~~h~s~~~~~~~~G~~---v~~v~~~~~~~~~d~~~l~~~i~~~------~~~v~~~ 209 (429)
..|....+. .+++|...|+|+.|++.++|++ ++.||+|++ ++||+++|+++|++. +.+|+.+
T Consensus 207 ~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD~~-~rmd~~~L~~~I~~~~~~g~p~~~VVat 285 (608)
T TIGR03811 207 EIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPVDSN-YRMDINELEKIIRKLAAEKTPILGVVGV 285 (608)
T ss_pred hhhhhccccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEeecCCC-CcCCHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 001111122 6888999999999999999996 899999876 899999999999752 5679999
Q ss_pred eCCCccccccChHHHHHHH---HHhhhccCCCc--cEEeecccccccccccCC---------------------------
Q 014163 210 LGSTLTGEFEDVKLLHDLL---TKKNEETGWDT--PIHVDAASGGFIAPFLYP--------------------------- 257 (429)
Q Consensus 210 ~~~~~tG~~~~l~~I~~la---~~~~~~~~~~~--~l~vD~a~~~~~~~~~~~--------------------------- 257 (429)
.|||.+|++||+++|+++| +++ |+ |+||||||||++.+.+.+
T Consensus 286 aGTT~~GaiDpl~eI~~l~~~~~~~------gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~ 359 (608)
T TIGR03811 286 VGSTEEGAVDGIDKIVALRNKLMKE------GIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEY 359 (608)
T ss_pred cCCcCCcccCCHHHHHHHHHHHHHc------CCceeEeeeccccchhhhhhccccccccccchhhccccccccccccccc
Confidence 9999999999999999999 456 66 799999999975222221
Q ss_pred ---CCcccc-CCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCC-------CCCceeccCCchhHHH
Q 014163 258 ---DLEWDF-RLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSD-------QPTFTLNFSKGSSQII 326 (429)
Q Consensus 258 ---~~~~~~-~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~tr~~~~~~ 326 (429)
+.+..+ +++++||+++++|||++.|++||++++|++. +.+.+.....|+... ...++++|||+++.++
T Consensus 360 l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll~Rd~~-~~~~~~~~a~Yl~~~~~~~p~~~g~~~legSR~ga~Al 438 (608)
T TIGR03811 360 ISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGIVIQDIR-MRDVISYFATYVFEKGADIPALLGAYILEGSKAGATAA 438 (608)
T ss_pred ccHhHHHHHhcCcCceEEEeCcccccccCCCeEEEEEeCHH-HHHHHhcCcchhccccccCcccccccceecCCccHHHH
Confidence 111122 5789999999999999999999999999875 345555667776421 1235678999988899
Q ss_pred HHHHHHHHc--CHHHHHHHHHHHHHHHHHHHHHHHh------CCCeEE--eeCCCCceEEEEEecCCCC---CCHHHHHH
Q 014163 327 AQYYQFIRL--GFEGYKNIMENCMGNARALREGLEK------TGRFEI--LSKDVGVPLVAFSLKDSSA---HTVFEISE 393 (429)
Q Consensus 327 ~~~~al~~l--~~~g~~~~~~~~~~~~~~l~~~L~~------~~~~~~--~~~~~~~~~v~f~~~~~~~---~~~~~~~~ 393 (429)
++|++++.+ |.+|+.++++++.++++++.+.|++ .+.+++ +.+| .+++|||++.+.+. ...+++++
T Consensus 439 klW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~~~~~~~~~~el~~~~~p-dlniV~Fr~~~~g~~~l~~~n~ln~ 517 (608)
T TIGR03811 439 SVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNLEFKVGDKEIEVHPLTKP-DFNMVDYVFNEKGNDDLVKMNKLNH 517 (608)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCeeEEecCCC-CcceEEEEEecCCCccHHHHHHHHH
Confidence 999999998 9999999999999999999999998 355676 5555 79999999976432 23778888
Q ss_pred HHHHHHh
Q 014163 394 GLRKKLN 400 (429)
Q Consensus 394 ~L~~~l~ 400 (429)
++.+++.
T Consensus 518 ~i~~~~~ 524 (608)
T TIGR03811 518 AFYDYAS 524 (608)
T ss_pred HHHHhhc
Confidence 8886655
No 10
>PLN02263 serine decarboxylase
Probab=100.00 E-value=1.1e-44 Score=351.35 Aligned_cols=335 Identities=18% Similarity=0.191 Sum_probs=266.6
Q ss_pred HHHHHHHHHHhhccCCCCCccccccccCC--C-hHHHHHHHHHHcCcCCCCCccCh---hhHHHHHHHHHHHHHhhCCCC
Q 014163 39 KEAAYQVINDELMLDGNPRLNLASFVTTW--M-EPECDKLVMASINKNYVDMDEYP---VTTELQNRCVNMIAHLFNTPV 112 (429)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~le~~~~~~la~l~g~~~ 112 (429)
.+++++.+.+.+.... .. +.+| |.. . ...+.+++...+|+-+..|..++ ...++|+++.+|+++++|.+.
T Consensus 75 ~~~~l~~~~~~~~~~~-~~--~~gY-p~n~~~d~s~l~~~l~~~~nN~Gdp~~~s~~~~~s~~~E~~Vi~wla~L~g~p~ 150 (470)
T PLN02263 75 MASVLARYRKTLVERT-KH--HLGY-PYNLDFDYGALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWEIEK 150 (470)
T ss_pred HHHHHHHHHHHHHhcc-cc--eeCC-CCcccCChhhHHHHHHhhccCCCCccccCCcchhHHHHHHHHHHHHHHHhCCCC
Confidence 4667777776665321 11 2344 432 2 24477877776665444455555 799999999999999999975
Q ss_pred CCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCH
Q 014163 113 ADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNP 192 (429)
Q Consensus 113 ~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~ 192 (429)
+ ..+|++|+||||||+++++++|+.+ .++.+++|+.+|+|+.|+++++|++++.||++++ ++||+
T Consensus 151 ~---~~~G~vtsGGTEaNL~Al~aARe~~-----------~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d~~-g~mD~ 215 (470)
T PLN02263 151 N---EYWGYITNCGTEGNLHGILVGREVF-----------PDGILYASRESHYSVFKAARMYRMECVKVDTLVS-GEIDC 215 (470)
T ss_pred C---CCeEEEeCcHHHHHHHHHHHHHhhc-----------CCcEEEEcCCccHHHHHHHHhcCCcceEeccCCC-CcCcH
Confidence 2 2579999999999999999999852 1247999999999999999999999999999875 89999
Q ss_pred HHHHHHhhhC---CeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCc-----cEEeecccccccccccCCCCccccC
Q 014163 193 VKAVELVDEN---TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDT-----PIHVDAASGGFIAPFLYPDLEWDFR 264 (429)
Q Consensus 193 ~~l~~~i~~~---~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~-----~l~vD~a~~~~~~~~~~~~~~~~~~ 264 (429)
++|+++|.++ |.+|+++.|||++|++||+++|+++|+++ |+ |+||||||||++++|......+++.
T Consensus 216 ~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~------g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df~ 289 (470)
T PLN02263 216 ADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEEC------GFSQDRFYIHCDGALFGLMMPFVKRAPKVTFK 289 (470)
T ss_pred HHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHc------CCccCCeeEEEeccchhhHhhhcccccccCCC
Confidence 9999999865 57888999999999999999999999999 86 9999999999888776554445554
Q ss_pred CCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHH
Q 014163 265 LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIM 344 (429)
Q Consensus 265 ~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~ 344 (429)
. .+||+++|+|||+++|.+||++++|++. + ..+.....|+.... .++.|||++...+++|++|+.+|.+|+++++
T Consensus 290 ~-~vDSIsvD~HK~l~~P~~cgvll~R~~~-~-~~~~~~~~Yl~~~d--~ti~gSR~g~~al~lW~~L~~~G~~G~~~~i 364 (470)
T PLN02263 290 K-PIGSVSVSGHKFVGCPMPCGVQITRMEH-I-NVLSSNVEYLASRD--ATIMGSRNGHAPIFLWYTLNRKGYRGFQKEV 364 (470)
T ss_pred c-CccEEEECCccccCCCcCEEEEEEehhh-H-hhhccChHhhCCCC--CCcCCCCCcHHHHHHHHHHHHhCHHHHHHHH
Confidence 3 4999999999999999999999999642 2 44556677887653 4678999987899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEe
Q 014163 345 ENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVIS 424 (429)
Q Consensus 345 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~ 424 (429)
+++.++++++.++|++.+ ++++.+| ..++++|+.+. ..+. .+||.+.+. + ..+++++
T Consensus 365 ~~~~~~A~~l~~~l~~~g-~~~~~~p-~s~~V~f~~p~----------~~~~----~~gW~L~~~-----~--~~~Hivv 421 (470)
T PLN02263 365 QKCLRNAHYLKDRLREAG-ISAMLNE-LSSTVVFERPK----------DEEF----VRRWQLACQ-----G--NIAHVVV 421 (470)
T ss_pred HHHHHHHHHHHHHHHhCC-CeEEeCC-CceEEEEecCc----------hHHh----hcceEEccC-----C--CcEEEEE
Confidence 999999999999999986 7777665 67888887532 1123 578887642 1 2388888
Q ss_pred cc
Q 014163 425 HL 426 (429)
Q Consensus 425 ~~ 426 (429)
+-
T Consensus 422 mp 423 (470)
T PLN02263 422 MP 423 (470)
T ss_pred cC
Confidence 64
No 11
>PLN03032 serine decarboxylase; Provisional
Probab=100.00 E-value=9.3e-43 Score=333.95 Aligned_cols=307 Identities=20% Similarity=0.205 Sum_probs=251.5
Q ss_pred HHHHHHHHHcCcCCCCCccCh----hhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 71 ECDKLVMASINKNYVDMDEYP----VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~----~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
...+.+..++.+|.+++.... .+.++|+++++|+++++|++++ ..+|++|+||||||+++++++++..
T Consensus 38 ~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg~~~~---~~~G~fTsGGTEaNl~al~~ar~~~----- 109 (374)
T PLN03032 38 GELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWELEKD---EYWGYITTCGTEGNLHGILVGREVF----- 109 (374)
T ss_pred HHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhCCCCc---cCCEEEeCchHHHHHHHHHHHHHhC-----
Confidence 345666667766666554433 6899999999999999999763 2458999999999999999987631
Q ss_pred hcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhh---CCeEEEEeeCCCccccccChHH
Q 014163 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGSTLTGEFEDVKL 223 (429)
Q Consensus 147 ~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~---~~~~v~~~~~~~~tG~~~~l~~ 223 (429)
.++.|++|..+|+|+.++++.+|++++.||++++ ++||+++|+++|++ +|.+|+++++||.+|++||+++
T Consensus 110 ------~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~~d~~-g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~e 182 (374)
T PLN03032 110 ------PDGILYASRESHYSVFKAARMYRMEAVKVPTLPS-GEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDDLDR 182 (374)
T ss_pred ------CCcEEEeCCCceeHHHHHHHHcCCCCeEeeeCCC-CcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHH
Confidence 1247999999999999999999999999999875 89999999999987 4789999999999999999999
Q ss_pred HHHHHHHhhhccCCC-----ccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCccc
Q 014163 224 LHDLLTKKNEETGWD-----TPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPD 298 (429)
Q Consensus 224 I~~la~~~~~~~~~~-----~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~ 298 (429)
|+++|+++ | +|+|||+|++++.+++.......++. .++||+++|+|||+++|.|+|++++|++ .+ .
T Consensus 183 I~~i~~~~------g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~-~~vDSis~s~HK~~g~P~g~G~ll~r~~-~~-~ 253 (374)
T PLN03032 183 ILRILKEL------GYTEDRFYIHCDGALFGLMMPFVSRAPEVTFR-KPIGSVSVSGHKFLGCPMPCGVALTRKK-HV-K 253 (374)
T ss_pred HHHHHHHh------CCCCCCeeEEEEccchhhhhhccCCCcccCCC-cCCcEEEECcccccCCCcCeEEEEEEch-hh-H
Confidence 99999999 7 59999999999887775443444553 3699999999999999999999999874 33 3
Q ss_pred ccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEE
Q 014163 299 ELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAF 378 (429)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f 378 (429)
.+....+|+... ..++.|||++..++++|++|+.+|.+|++++++++.++++++.+.|++.+ ++++..| ..++|+|
T Consensus 254 ~~~~~~~Yl~~~--d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~~a~~l~~~l~~~~-~~~~~~p-~~~~V~f 329 (374)
T PLN03032 254 ALSQNVEYLNSR--DATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMRNAHYLKDRLTEAG-LTCRLNE-LSSTVVF 329 (374)
T ss_pred hhccCCcccCCC--CCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCC-CcEEECC-CceEEEE
Confidence 455567887654 45788999988999999999999999999999999999999999999975 8877766 6788888
Q ss_pred EecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEecc
Q 014163 379 SLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHL 426 (429)
Q Consensus 379 ~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~ 426 (429)
+.+.. ..+ .+||.+.+. + ..+|++++-
T Consensus 330 ~~~~~---------~~~-----~~~w~l~~~-----~--~~~hi~vm~ 356 (374)
T PLN03032 330 ERPMD---------EAF-----IKKWQLACE-----G--DIAHVVVMP 356 (374)
T ss_pred cCCCc---------HhH-----hheeeeccc-----C--CEEEEEECC
Confidence 86421 122 367876631 2 268998864
No 12
>PRK02769 histidine decarboxylase; Provisional
Probab=100.00 E-value=3.1e-42 Score=333.02 Aligned_cols=307 Identities=20% Similarity=0.296 Sum_probs=249.7
Q ss_pred HHHHHHHHHHcCcCCCCCccCh----hhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHH
Q 014163 70 PECDKLVMASINKNYVDMDEYP----VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (429)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~----~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~ 145 (429)
..+.+.+.... +|.+++...+ ...++|+++++|+++++|++.+. .+|++|+||||||+++++++++..
T Consensus 37 ~~~~~~~~~~~-~n~gnp~~~~~~g~~~~~~e~~~~~~~a~l~g~~~~~---~~G~~TsGgTean~~a~~~ar~~~---- 108 (380)
T PRK02769 37 SALKRFFSFSI-NNCGDPYSKSNYPLNSFDFERDVMNFFAELFKIPFNE---SWGYITNGGTEGNLYGCYLARELF---- 108 (380)
T ss_pred HHHHHHHHhhh-ccCCCccccCCCCCChHHHHHHHHHHHHHHhCCCCCC---CCEEEecChHHHHHHHHHHHHHhC----
Confidence 34555544444 4555555544 47899999999999999997532 468999999999999998887631
Q ss_pred HhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhC---CeEEEEeeCCCccccccChH
Q 014163 146 KEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDEN---TICVAAILGSTLTGEFEDVK 222 (429)
Q Consensus 146 ~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~---~~~v~~~~~~~~tG~~~~l~ 222 (429)
.+++|++|+.+|+|+.++++.+|++.+.|+++++ +++|+++|+++|+++ |.+|+++++||.+|.+||++
T Consensus 109 -------~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~~~-g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~ 180 (380)
T PRK02769 109 -------PDGTLYYSKDTHYSVSKIARLLRIKSRVITSLPN-GEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNIK 180 (380)
T ss_pred -------CCcEEEeCCCceehHHHHHHHcCCCCceeccCCC-CcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHH
Confidence 1258999999999999999999999999999864 899999999999987 99999999999999999999
Q ss_pred HHHHHHHHhhhccCCC---ccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccc
Q 014163 223 LLHDLLTKKNEETGWD---TPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDE 299 (429)
Q Consensus 223 ~I~~la~~~~~~~~~~---~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~ 299 (429)
+|+++|+++ | +|+||||||+++.++|......+++.. ++|++++|+|||+++|.|+|++++|++. + ..
T Consensus 181 ~I~~i~~~~------g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~-~vDsis~s~HK~~~~P~g~G~l~~r~~~-~-~~ 251 (380)
T PRK02769 181 EIQEILKKI------GIDDYYIHADAALSGMILPFVNNPPPFSFAD-GIDSIAISGHKFIGSPMPCGIVLAKKKY-V-ER 251 (380)
T ss_pred HHHHHHHHh------CCCceEEEEEecccceeecccCccccCCccC-CCCEEEECCcccCCCCCCcEEEEEehhh-h-hh
Confidence 999999999 8 699999999998887765544556544 7999999999999999999999998743 2 23
Q ss_pred cccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEE
Q 014163 300 LVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFS 379 (429)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~ 379 (429)
+.....|+... ..++.|||++..++++|++++.+|.+|++++.+++.++++++.++|++.+ ++++.+| ..++|+|+
T Consensus 252 ~~~~~~yl~~~--d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~~~L~~~g-~~~~~~p-~~~~v~f~ 327 (380)
T PRK02769 252 ISVDVDYIGSR--DQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAVDRLQANG-IPAWRNP-NSITVVFP 327 (380)
T ss_pred cccCccccCCC--CCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCC-CEEEcCC-CceEEEEc
Confidence 33456666543 34678999998999999999999999999999999999999999999875 8888876 78999997
Q ss_pred ecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 380 LKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 380 ~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
.++ ..+. +||.+.+. + ..+|++++.+
T Consensus 328 ~~~----------~~~~-----~~w~l~~~-----~--~~~hi~~~~~ 353 (380)
T PRK02769 328 CPS----------ERIW-----KKWHLATS-----G--NQAHIITMPH 353 (380)
T ss_pred CCC----------HHHH-----hCeeEccc-----C--CEEEEEECCC
Confidence 532 1122 57776642 2 2689988643
No 13
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=7e-42 Score=313.99 Aligned_cols=397 Identities=16% Similarity=0.179 Sum_probs=316.7
Q ss_pred cccccCchhhhhcCCCCCCCCCCCCHHHHHHHHHHhhc---cCCCCCccccccccCCCh--HHHHHHHHHHcCcCCCCCc
Q 014163 14 LSSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELM---LDGNPRLNLASFVTTWME--PECDKLVMASINKNYVDMD 88 (429)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 88 (429)
|=+..-|..++..+. ..+|+++.+..++++.-.+.+. .+|||+| .+....... ..+.+.+.+..|.|.+.|+
T Consensus 58 v~~fhhP~~L~~l~n-lel~~~~esl~qil~~cr~tl~y~vKTgHprf--fNQl~~glD~~~Lag~wlT~t~Ntn~~TYE 134 (510)
T KOG0629|consen 58 VLDFHHPDELKELFN-LELRDQPESLAQILEDCRDTLKYSVKTGHPRF--FNQLSSGLDPIGLAGEWLTSTANTNMFTYE 134 (510)
T ss_pred eecccChHHHHHHhC-cccCCChhhHHHHHHHHHHHHHhhhccCCCcc--hhhhccCCCHHHHHHHHHHhccCCCCceEE
Confidence 334455566666555 4899999999999999888775 5899997 222222333 3478999999999999999
Q ss_pred cChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCc-EEEEcCCCchHH
Q 014163 89 EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKP-NIVTGANVQVCW 167 (429)
Q Consensus 89 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~-~vi~~~~~h~s~ 167 (429)
..|...-+|+++...+.++.|++.. ..++++.||+-+|++++.+++.+..++.+..|...-.+ .+++|+.+|||+
T Consensus 135 iAPvF~lmE~~vl~km~~ivGw~~~----~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi 210 (510)
T KOG0629|consen 135 IAPVFVLMEEEVLAKMREIVGWEEG----GDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSI 210 (510)
T ss_pred ecceEEeehHHHHHHHHHHhCCCCC----CCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhH
Confidence 9999999999999999999999874 24999999999999999999998877766666443334 556799999999
Q ss_pred HHHHHhcCce---eEEEeccCCccccCHHHHHHHhhh---C---CeEEEEeeCCCccccccChHHHHHHHHHhhhccCCC
Q 014163 168 EKFARYFEVE---LKEVKLEEGYYVMNPVKAVELVDE---N---TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWD 238 (429)
Q Consensus 168 ~~~~~~~G~~---v~~v~~~~~~~~~d~~~l~~~i~~---~---~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~ 238 (429)
.+++.++|++ ++.|++++. |.|++++||++|-+ + |..|.+|.|||..|++||+..|+++|++| +
T Consensus 211 ~kaAa~lg~gtd~c~~v~t~e~-Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~k~------~ 283 (510)
T KOG0629|consen 211 KKAAAFLGLGTDHCIKVKTDER-GKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICEKH------K 283 (510)
T ss_pred HHHHHHhccCCceeEEeccccc-CccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHHhc------C
Confidence 9999999965 888999986 89999999999875 2 68899999999999999999999999999 9
Q ss_pred ccEEeecccccccccccCCCCcccc-CCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCC------
Q 014163 239 TPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQ------ 311 (429)
Q Consensus 239 ~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~------ 311 (429)
+|+|||||+||+.+ +....++.+ ++++++|+++++||++++|..|+.+++|....+..+-...+.|+....
T Consensus 284 lWmHvDAAwGGglL--mS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS 361 (510)
T KOG0629|consen 284 LWMHVDAAWGGGLL--MSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVS 361 (510)
T ss_pred EEEEeecccccccc--cChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHHHHHHhhcccchhhhhccCceeecc
Confidence 99999999999765 555556655 788999999999999999999999998876655444334445544322
Q ss_pred ---CCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCC-CCceEEEEEecCCC---
Q 014163 312 ---PTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKD-VGVPLVAFSLKDSS--- 384 (429)
Q Consensus 312 ---~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~v~f~~~~~~--- 384 (429)
....+++.|. ..++++|..+++-|..|+++.++++.++++||.++|++.++++.+... +....+||.+.++.
T Consensus 362 ~DTgdK~iQCGRh-~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~~lR~ 440 (510)
T KOG0629|consen 362 YDTGDKAIQCGRH-VDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPPSLRG 440 (510)
T ss_pred cccccchhhcCcc-ccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeeccCchHhcc
Confidence 2334667765 589999999999999999999999999999999999999988776653 35677888886531
Q ss_pred -------CCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEecccc
Q 014163 385 -------AHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLRR 428 (429)
Q Consensus 385 -------~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~~ 428 (429)
......++-.+..++.++|-....|+|..+ ...++|..+.++.
T Consensus 441 ~~~~~e~~~rL~kVaPkIK~~Mm~~Gt~Mi~YqPl~~-~~nffr~v~sn~a 490 (510)
T KOG0629|consen 441 WQENPERDSRLVKVAPKIKERMMKKGTTMIGYQPLGD-KPNFFRMVISNPA 490 (510)
T ss_pred CcccchhhhHHHhhCcHHHHHHHhccceeeEeccccc-ccchhheecccch
Confidence 123455666777778899977766655543 3458999888763
No 14
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=100.00 E-value=9.2e-37 Score=295.22 Aligned_cols=306 Identities=33% Similarity=0.424 Sum_probs=243.9
Q ss_pred HHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCC
Q 014163 71 ECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGK 150 (429)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~ 150 (429)
.+.+.+...+|++...|..+++..++|+++++|+++++|++... ..+++|+|||+|+++++.+++.+..++.+..|.
T Consensus 14 ~~~~~~~~~~n~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~---~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~ 90 (345)
T cd06450 14 LLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSED---ADGVFTSGGSESNLLALLAARDRARKRLKAGGG 90 (345)
T ss_pred HHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHhCCCCCC---CCEEEeCChhHHHHHHHHHHHHHhhhhhhcccc
Confidence 48899999999887778899999999999999999999997211 348999999999999999988754332221111
Q ss_pred -CCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhh------CCeEEEEeeCCCccccccChHH
Q 014163 151 -PYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE------NTICVAAILGSTLTGEFEDVKL 223 (429)
Q Consensus 151 -~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~------~~~~v~~~~~~~~tG~~~~l~~ 223 (429)
+..+++|++++++|+++.++++.+|++++.+|++++ +.+|+++|++++++ ++++|++++++|++|.++|+++
T Consensus 91 ~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~ 169 (345)
T cd06450 91 RGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVDED-GRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEE 169 (345)
T ss_pred cccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeCCC-CCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHH
Confidence 112358899999999999999999999999999875 68999999999988 7889999999999999999999
Q ss_pred HHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccc
Q 014163 224 LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFH 303 (429)
Q Consensus 224 I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~ 303 (429)
|+++|+++ ++|+|+|+||+.+..++..... ......++|++++++|||+++|.|+|+++++
T Consensus 170 i~~~~~~~------~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~------------ 230 (345)
T cd06450 170 IADLAEKY------DLWLHVDAAYGGFLLPFPEPRH-LDFGIERVDSISVDPHKYGLVPLGCSAVLVR------------ 230 (345)
T ss_pred HHHHHHHh------CCeEEEechhhHHHhhChhhHH-HhcCccccCEEEEchhHhhCCCcchHHHHHH------------
Confidence 99999999 9999999999876543221111 1223457999999999999999999987543
Q ss_pred cCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCC
Q 014163 304 INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDS 383 (429)
Q Consensus 304 ~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~ 383 (429)
.+++|++++.++.+++++++++..++++++.+.|+++++++++.++ +.++++|++.+.
T Consensus 231 ---------------------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~iv~f~~~~~ 288 (345)
T cd06450 231 ---------------------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPGFELLGEP-NLSLVCFRLKPS 288 (345)
T ss_pred ---------------------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-ceeEEEEEECCc
Confidence 6678899999999999999999999999999999999889887655 688999998642
Q ss_pred C--CCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 384 S--AHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 384 ~--~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
. +.+..++.+.|. ++|+.+... ........+|++++..
T Consensus 289 ~~~~~~~~~i~~~L~----~~g~~~~~~--~~~~~~~~lRis~~~~ 328 (345)
T cd06450 289 VKLDELNYDLSDRLN----ERGGWHVPA--TTLGGPNVLRFVVTNP 328 (345)
T ss_pred chhhHHHHHHHHHHH----hcCCEEEEe--eEECCeEEEEEEecCC
Confidence 0 133445555555 886554322 1122567899999753
No 15
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=100.00 E-value=2.4e-35 Score=288.19 Aligned_cols=349 Identities=30% Similarity=0.409 Sum_probs=266.6
Q ss_pred CCHHHHHHHHHHhhccCCCCCccccccccCCChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCC
Q 014163 37 MPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDK 116 (429)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~ 116 (429)
.++.++++.+.+....+ -|...+.++..+++.|.+.+++.+++..+.++...+++..++++++++++++++|++..
T Consensus 2 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~~--- 77 (371)
T PRK13520 2 LSEEEILEELEEYRSED-LKYERILSSMCTEPHPIARKAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLHLPDA--- 77 (371)
T ss_pred CCHHHHHHHHHHHHhcC-CCHHHeeeeeecCchHHHHHHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhCCCCC---
Confidence 35678888887765532 22212234444567788888888888766555444577888889999999999998752
Q ss_pred CCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHH
Q 014163 117 TAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAV 196 (429)
Q Consensus 117 ~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~ 196 (429)
.+++++||++++..++.+++.... ..+++|++++.+|+++.++++..|++++.||.+++ +.+|+++|+
T Consensus 78 --~~~~~~ggt~a~~~a~~~~~~~~~---------~~~~~vl~~~~~h~s~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~ 145 (371)
T PRK13520 78 --YGYITSGGTEANIQAVRAARNLAK---------AEKPNIVVPESAHFSFDKAADMLGVELRRAPLDDD-YRVDVKAVE 145 (371)
T ss_pred --CeEEecCcHHHHHHHHHHHHhhcc---------CCCceEEecCcchHHHHHHHHHcCceEEEecCCCC-CcCCHHHHH
Confidence 378999999999999888765210 01368999999999999999999999999998765 789999999
Q ss_pred HHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCc
Q 014163 197 ELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGH 276 (429)
Q Consensus 197 ~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~h 276 (429)
+++++++++|++++++|++|.+.|+++|.++|+++ |+++|||++|+++..++......+++...++|++++++|
T Consensus 146 ~~i~~~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~------g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~~s~~ 219 (371)
T PRK13520 146 DLIDDNTIGIVGIAGTTELGQVDPIPELSKIALEN------GIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSITIDPH 219 (371)
T ss_pred HHHhhCCEEEEEEcCCcCCcccCCHHHHHHHHHHc------CCCEEEEecchhHHHHhhcCCCCccccCCCCceEEECCc
Confidence 99999998888999999999999999999999999 999999999988765443322223444567999999999
Q ss_pred ccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH
Q 014163 277 KYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALRE 356 (429)
Q Consensus 277 K~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~ 356 (429)
||+++|.++|++++++++.. +.+.....|..+.. .+...||+++...++++++++.++.++++++.++..++++++.+
T Consensus 220 K~~~a~~~~G~~~~~~~~~~-~~l~~~~~~~~~~~-~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~ 297 (371)
T PRK13520 220 KMGLAPIPAGGILFRDESYL-DALAVDTPYLTSKK-QATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAE 297 (371)
T ss_pred cccCccCCceEEEEcCHHHH-HhhcccCccccCCC-CcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHH
Confidence 99999999998888765332 22222223433221 23445788877888999999999999999999999999999999
Q ss_pred HHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEec
Q 014163 357 GLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 357 ~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
.|+++ +++++.++ ..++++|.++ +..++.++|. ++|+.++.. .....+|+|++
T Consensus 298 ~L~~~-g~~~~~~~-~~~~v~~~~~-----~~~~v~~~L~----~~gi~v~~~-----~~~~~iRis~~ 350 (371)
T PRK13520 298 ELKER-GFEPVIEP-VLNIVAFDDP-----NPDEVREKLR----ERGWRVSVT-----RCPEALRIVCM 350 (371)
T ss_pred HHHhC-CCEEecCC-CceEEEEecC-----CHHHHHHHHH----HCCceeccC-----CCCCEEEEEEE
Confidence 99998 48855444 5778888764 3457777777 889988653 22346999985
No 16
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.3e-34 Score=279.28 Aligned_cols=326 Identities=19% Similarity=0.137 Sum_probs=255.3
Q ss_pred cccccCCChHHHHHHHHHHcC---cCCC--CCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHH
Q 014163 61 ASFVTTWMEPECDKLVMASIN---KNYV--DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (429)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~ 135 (429)
-+..++..+..+.+++..++. .|.+ .+..+...++..+++++.+++++|.++. ..+++|.|.|+|+++...
T Consensus 27 D~aa~~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~----~eIvft~~tT~aln~va~ 102 (405)
T COG0520 27 DNAATSQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSS----DEIVFTRGTTEALNLVAR 102 (405)
T ss_pred cCcccccCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCC----CeEEEeCChhHHHHHHHH
Confidence 333333444557777776653 3332 3445557777888999999999999852 239999999999999888
Q ss_pred HHHHHHHHHHHhcCCCCCCcEEEEcCCCchH----HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeC
Q 014163 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILG 211 (429)
Q Consensus 136 a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s----~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~ 211 (429)
++...+. .+++||+++..|++ |...++..|++++.+|+++ ++.+|.+++++.++++|++|.+++.
T Consensus 103 ~l~~~~~----------~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~-~g~~~~~~~~~~i~~~Tklvais~v 171 (405)
T COG0520 103 GLGRSLK----------PGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDD-DGLLDLDALEKLITPKTKLVALSHV 171 (405)
T ss_pred Hhhhhhc----------CCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCC-CCCcCHHHHHHhcCCCceEEEEECc
Confidence 8754211 23799999999985 8888898999999999985 4899999999999999999999999
Q ss_pred CCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEe
Q 014163 212 STLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (429)
Q Consensus 212 ~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~ 291 (429)
+|.||.+.|+++|+++||++ |+|++||+||+.+.. +.|+...++|++.+|+|||+++|.|+|++++|
T Consensus 172 Sn~tG~~~pv~~I~~la~~~------ga~v~VDaaq~~~h~-------~idv~~l~~Df~afsgHKwl~gP~GiGvLy~r 238 (405)
T COG0520 172 SNVTGTVNPVKEIAELAHEH------GALVLVDAAQAAGHL-------PIDVQELGCDFLAFSGHKWLLGPTGIGVLYVR 238 (405)
T ss_pred cccccccchHHHHHHHHHHc------CCEEEEECccccCcc-------CCCchhcCCCEEEEcccccccCCCceEEEEEc
Confidence 99999999999999999999 999999999986543 34555568999999999999999999999998
Q ss_pred CCCCcccccccccCCCCCCC---------------CCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH
Q 014163 292 TKDDLPDELVFHINYLGSDQ---------------PTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALRE 356 (429)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~ 356 (429)
++ .+ ..+ .+...++.. +.-.-.||++....+++-++++.+...|++++.++.+++++++.+
T Consensus 239 ~~-~l-~~l--~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~ 314 (405)
T COG0520 239 KE-LL-EEL--EPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLE 314 (405)
T ss_pred hH-HH-hhc--CCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 64 22 221 111221110 011124788888889999999999999999999999999999999
Q ss_pred HHHhCCCeEEeeCCC--CceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCC-----CC-ceEEEEEec
Q 014163 357 GLEKTGRFEILSKDV--GVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSY-----PW-STKLRVISH 425 (429)
Q Consensus 357 ~L~~~~~~~~~~~~~--~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~-----~~-~~~lRi~~~ 425 (429)
.|+++|++++++++. +.++++|+++ +++..+++..|. ++||.++...+... .+ ...+|+|++
T Consensus 315 ~L~~~~~v~i~g~~~~~r~~~vsF~v~---~~~~~dv~~~L~----~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~ 384 (405)
T COG0520 315 GLSELPGVEIYGPPDADRGGIVSFNVK---GIHPHDVATLLD----EKGIAVRAGHHCAQPLHRLLGVDATIRASLH 384 (405)
T ss_pred HHhcCCCeEEecCCcccCceEEEEEeC---CCCHHHHHHHHH----hCCeEEEeccccccHHHHhcCCCCceEEEEe
Confidence 999999999999864 7899999986 457889999998 99988876522111 01 123899986
No 17
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=100.00 E-value=1.1e-33 Score=276.64 Aligned_cols=349 Identities=30% Similarity=0.416 Sum_probs=258.7
Q ss_pred CHHHHHHHHHHhhcc---CCCCCccccccccCCChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCC
Q 014163 38 PKEAAYQVINDELML---DGNPRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVAD 114 (429)
Q Consensus 38 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~ 114 (429)
+.+++++.+.+.... .+.++. +.++++ .+.|.+.+++..++..+..+...+++..++++++++++++++|++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~~-- 76 (373)
T TIGR03812 1 SEEEVLEELKEYRSEDLKYSDGRI-LGSMCT-NPHPIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHLPD-- 76 (373)
T ss_pred CHHHHHHHHHHHHhcCCCCCCCcE-EEEEeC-CchHHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCCCC--
Confidence 356778888776442 223333 455555 4555566666666655544444456778888999999999999975
Q ss_pred CCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHH
Q 014163 115 DKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVK 194 (429)
Q Consensus 115 ~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~ 194 (429)
..+++++|+++++..++.+++..... +..+++|++++++|+++.++++..|++++.++++++ +.+|+++
T Consensus 77 ---~~~~~~~g~~~~~~~~~~~~~~~~~~-------~~~g~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~~~-~~~d~~~ 145 (373)
T TIGR03812 77 ---AYGYIVSGGTEANIQAVRAAKNLARE-------EKRTPNIIVPESAHFSFEKAAEMLGLELRYAPLDED-YTVDVKD 145 (373)
T ss_pred ---CCeEEeccHHHHHHHHHHHHHHHHhc-------cCCCcEEEECCcchHHHHHHHHHcCCeEEEEeeCCC-CCcCHHH
Confidence 23788999999998888776542110 002258999999999999999999999999999765 8899999
Q ss_pred HHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCC---CCccccCCCCeeEE
Q 014163 195 AVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYP---DLEWDFRLPLVKSI 271 (429)
Q Consensus 195 l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~---~~~~~~~~~~~d~~ 271 (429)
|++++++++..+++++++|++|.++|+++|+++|+++ ++|+|+|+||+++..++... ....++...++|++
T Consensus 146 l~~~l~~~~~~vv~~~~~~~tG~~~~~~~i~~l~~~~------~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~d~~ 219 (373)
T TIGR03812 146 VEDLIDDNTIGIVGIAGTTELGQIDDIEELSKIALEN------GIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGVQSI 219 (373)
T ss_pred HHHHHhhCcEEEEEECCCCCCCccCCHHHHHHHHHHc------CCeEEEEcCchhHHHHHHhcCCCCCCccccCCCCCEE
Confidence 9999998886667677899999999999999999999 99999999998765543311 11234444579999
Q ss_pred EEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Q 014163 272 NVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNA 351 (429)
Q Consensus 272 ~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~ 351 (429)
++++|||+++|.++|++++++++.+ +.+.....|.... ..+...||++...+++++++++.++.+++++..++..+++
T Consensus 220 ~~s~~K~~~~~~~~G~~~~~~~~~~-~~l~~~~~~~~~~-~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~ 297 (373)
T TIGR03812 220 TIDPHKMGLSPIPAGGILFRSKSYL-KYLSVDAPYLTVK-KQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENT 297 (373)
T ss_pred EECccccCCCcCCceEEEEeCHHHH-hhhcccCcccCCC-CCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 9999999999999988777665443 2222223343322 1234458888788889999999999999999999999999
Q ss_pred HHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEec
Q 014163 352 RALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 352 ~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
+++++.|++++ ++.+.++ ..++++|+.++ ..++.+.|. ++|+.++.. ....++|+|++
T Consensus 298 ~~l~~~L~~~g-~~~~~~~-~~~~v~~~~~~-----~~~v~~~L~----~~gi~v~~~-----~~~~~iRis~~ 355 (373)
T TIGR03812 298 RYLVEELKKIG-FEPVIEP-VLNIVAFEVDD-----PEEVRKKLR----DRGWYVSVT-----RCPKALRIVVM 355 (373)
T ss_pred HHHHHHHHhCC-CeEEcCC-CceEEEEEeCC-----HHHHHHHHH----HCCceeccC-----CCCCEEEEEEE
Confidence 99999999987 5544443 57888888642 246666776 899998643 12347999986
No 18
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=1.6e-33 Score=263.41 Aligned_cols=305 Identities=16% Similarity=0.109 Sum_probs=236.0
Q ss_pred ccCCChHHHHHHHHHHcCcCCCCCcc----ChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHH
Q 014163 64 VTTWMEPECDKLVMASINKNYVDMDE----YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (429)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~ 139 (429)
.++++.|++.++|..++...++++.+ +....++-+++++.+++++|+++. .++||+||||++++++..+..
T Consensus 9 ATTp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~-----eIiFTSG~TEsnNlaI~g~~~ 83 (386)
T COG1104 9 ATTPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADPE-----EIIFTSGATESNNLAIKGAAL 83 (386)
T ss_pred ccCCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCC-----eEEEecCCcHHHHHHHHhhHH
Confidence 35567788999888887765444332 335566777999999999999873 499999999999999998543
Q ss_pred HHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhc---CceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccc
Q 014163 140 KWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYF---EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (429)
Q Consensus 140 ~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~---G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG 216 (429)
.+..+ ..+..||++...|.++...++++ |++|.++|++.+ |.+|+++|+++|+++|.+|.+.+.||.+|
T Consensus 84 a~~~~-------~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~~-G~v~~e~L~~al~~~T~LVSim~aNnE~G 155 (386)
T COG1104 84 AYRNA-------QKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSN-GLVDLEQLEEALRPDTILVSIMHANNETG 155 (386)
T ss_pred hhhcc-------cCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCCC-CeEcHHHHHHhcCCCceEEEEEecccCee
Confidence 22110 01248999999999999998888 999999999985 89999999999999999999999999999
Q ss_pred cccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCc
Q 014163 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDL 296 (429)
Q Consensus 217 ~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~ 296 (429)
+++|+++|+++||++ ++++|+|++|+.+-. +.++...++|.+++|+||+. +|.|+|.+++++.-.
T Consensus 156 ~IQpI~ei~~i~k~~------~i~fHvDAvQa~Gki-------pi~~~~~~vD~ls~SaHK~~-GpkGiGaLyv~~~~~- 220 (386)
T COG1104 156 TIQPIAEIGEICKER------GILFHVDAVQAVGKI-------PIDLEELGVDLLSFSAHKFG-GPKGIGALYVRPGVR- 220 (386)
T ss_pred ecccHHHHHHHHHHc------CCeEEEehhhhcCce-------eccccccCcceEEeehhhcc-CCCceEEEEECCCCc-
Confidence 999999999999999 999999999986544 33444446999999999965 899999999854321
Q ss_pred ccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEeeCC-C-Cc
Q 014163 297 PDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKT-GRFEILSKD-V-GV 373 (429)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-~~~~~~~~~-~-~~ 373 (429)
..+...++.+..---.||.+...++++-.|++. ..+.++...++...++++|.+.|.+. |++.+...+ . -.
T Consensus 221 -----~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~-a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP 294 (386)
T COG1104 221 -----LEPLIHGGGQERGLRSGTENVPGIVGFGKAAEI-AVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLP 294 (386)
T ss_pred -----cCceeccCcCCCCCCCCCccHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCC
Confidence 233444444433333477777777776666654 34457888899999999999999976 777777653 2 34
Q ss_pred eEEEEEecCCCCCCHHHHHHHHHHHHhccCceeccc
Q 014163 374 PLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK 409 (429)
Q Consensus 374 ~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~ 409 (429)
++++|.+++ +..+.+...|. .+||.+++.
T Consensus 295 ~~~~~~f~g---v~gE~ll~~L~----~~gI~vStG 323 (386)
T COG1104 295 NILNFSFPG---VEGESLLLALD----LAGIAVSTG 323 (386)
T ss_pred CeEEEEeCC---CcHHHHHHhcc----ccCeEEecc
Confidence 678888764 45556665665 899999875
No 19
>PLN02651 cysteine desulfurase
Probab=100.00 E-value=3.9e-30 Score=250.38 Aligned_cols=300 Identities=15% Similarity=0.094 Sum_probs=225.3
Q ss_pred CCChHHHHHHHHHHcCcCCCCCc-----cChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHH
Q 014163 66 TWMEPECDKLVMASINKNYVDMD-----EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRK 140 (429)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~ 140 (429)
++.++.+.+++..++.....++. .+....++.+++++.+++++|.+++ .+++|+|+|+++++++..+...
T Consensus 9 ~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-----~v~~t~~~t~a~~~~l~~~~~~ 83 (364)
T PLN02651 9 TPIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALIGADPK-----EIIFTSGATESNNLAIKGVMHF 83 (364)
T ss_pred CCCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC-----eEEEeCCHHHHHHHHHHHHHHh
Confidence 34556678887766643332221 1244566777899999999998752 3889999999999998877542
Q ss_pred HHHHHHhcCCCCCCcEEEEcCCCchHHHHHH---HhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCcccc
Q 014163 141 WQQKRKEQGKPYDKPNIVTGANVQVCWEKFA---RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGE 217 (429)
Q Consensus 141 ~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~---~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~ 217 (429)
..+ .+++|+++...|+++.... ...|++++.+|++++ +.+|+++|++++++++++|++++++|+||.
T Consensus 84 ~~~---------~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~ 153 (364)
T PLN02651 84 YKD---------KKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVKSD-GLVDLDELAAAIRPDTALVSVMAVNNEIGV 153 (364)
T ss_pred ccC---------CCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccCCC-CcCCHHHHHHhcCCCcEEEEEECCCCCcee
Confidence 110 2368999999998855443 346899999998765 789999999999999999999999999999
Q ss_pred ccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcc
Q 014163 218 FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP 297 (429)
Q Consensus 218 ~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~ 297 (429)
+.|+++|+++||++ |+++|||++|+.+..+ .++...++|++++++||| ++|.|+|+++++++...
T Consensus 154 ~~~l~~I~~~~~~~------g~~~~vD~a~~~g~~~-------~~~~~~~~D~~~~s~hK~-~gp~G~g~l~v~~~~~~- 218 (364)
T PLN02651 154 IQPVEEIGELCREK------KVLFHTDAAQAVGKIP-------VDVDDLGVDLMSISGHKI-YGPKGVGALYVRRRPRV- 218 (364)
T ss_pred cccHHHHHHHHHHc------CCEEEEEcchhhCCcc-------cCcccCCCCEEEechhhh-CCCCceEEEEEcCCCCC-
Confidence 99999999999999 9999999999875443 233334699999999998 68999999999864221
Q ss_pred cccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHh-CCCeEEeeCC--C--C
Q 014163 298 DELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEK-TGRFEILSKD--V--G 372 (429)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~--~--~ 372 (429)
. ..+.+.++........||++...++++.++++.+... .+++.++..++++++.+.|++ +++++++.+. . .
T Consensus 219 ~---l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~~~-~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~ 294 (364)
T PLN02651 219 R---LEPLMSGGGQERGRRSGTENTPLVVGLGAACELAMKE-MDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRY 294 (364)
T ss_pred C---CCccccCCCccCCccCCCccHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCc
Confidence 1 1222222222111125899888899999999888654 488889999999999999986 6789999852 1 2
Q ss_pred ceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecc
Q 014163 373 VPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQ 408 (429)
Q Consensus 373 ~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~ 408 (429)
.++++|.++ +.+..++.+.|. + |.++.
T Consensus 295 ~~i~~~~~~---~~~~~~~~~~L~----~--i~v~~ 321 (364)
T PLN02651 295 PGTLNLSFA---YVEGESLLMGLK----E--VAVSS 321 (364)
T ss_pred CCEEEEEeC---CCCHHHHHHHhC----C--EEEEc
Confidence 469999884 456777887776 5 66653
No 20
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.98 E-value=3.7e-30 Score=250.31 Aligned_cols=331 Identities=17% Similarity=0.135 Sum_probs=250.2
Q ss_pred CCCccccccccCCChHH-HHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHH
Q 014163 55 NPRLNLASFVTTWMEPE-CDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLA 133 (429)
Q Consensus 55 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~a 133 (429)
...++|+.+.|+.++|. +.+++..+++.....|....+..+|++.+.+++.+.+|.+.+..+ .+++|+|+++|+..+
T Consensus 28 ~~vi~l~iG~Pd~~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~--eiivt~Ga~~al~~~ 105 (393)
T COG0436 28 EDVIDLSIGEPDFPTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDPEE--EIIVTAGAKEALFLA 105 (393)
T ss_pred CCEEEeCCCCCCCCCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC--eEEEeCCHHHHHHHH
Confidence 45678999999887665 888888888765325567889999999999999999996654332 389999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccC--CccccCHHHHHHHhhhCCeEEEEeeC
Q 014163 134 GLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE--GYYVMNPVKAVELVDENTICVAAILG 211 (429)
Q Consensus 134 l~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~--~~~~~d~~~l~~~i~~~~~~v~~~~~ 211 (429)
+.++.+. +++|++++|.|.++.....+.|+++..++++. ++|.+|+++|+++++++|++|++++|
T Consensus 106 ~~a~~~p-------------GDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~P 172 (393)
T COG0436 106 FLALLNP-------------GDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSP 172 (393)
T ss_pred HHHhcCC-------------CCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEeCC
Confidence 9999872 36899999999999999999999999999853 35999999999999999999999999
Q ss_pred CCccccc---cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCC-Cc--cccC--CCCeeEEEEcCcccCCCCC
Q 014163 212 STLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD-LE--WDFR--LPLVKSINVSGHKYGLVYA 283 (429)
Q Consensus 212 ~~~tG~~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~-~~--~~~~--~~~~d~~~~s~hK~~~~p~ 283 (429)
+||||++ +.+++|+++|++| ++|+++|++|.++.. .+. .. ..+. .+.+-++...++-+.++++
T Consensus 173 ~NPTGav~~~~~l~~i~~~a~~~------~i~ii~DEiY~~l~y---d~~~~~s~~~~~~~~~~~i~i~s~SK~~~mtGw 243 (393)
T COG0436 173 NNPTGAVYSKEELKAIVELAREH------DIIIISDEIYEELVY---DGAEHPSILELAGARDRTITINSFSKTYGMTGW 243 (393)
T ss_pred CCCcCcCCCHHHHHHHHHHHHHc------CeEEEEehhhhhccc---CCCCcCCHhhcCCCcceEEEEeccccccccccc
Confidence 9999998 5588999999999 999999999987542 211 11 1111 1346666666777999999
Q ss_pred CeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCH----HHHHHHHHHHHHHHHHHHHHHH
Q 014163 284 GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF----EGYKNIMENCMGNARALREGLE 359 (429)
Q Consensus 284 g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~----~g~~~~~~~~~~~~~~l~~~L~ 359 (429)
++||++..+++. .+.+.....+... +.....|.+++..+.. +.++...+...++++.+.+.|.
T Consensus 244 RvG~~v~~~~~l-~~~~~~~~~~~~~------------~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~ 310 (393)
T COG0436 244 RIGWVVGPPEEL-IAALRKLKSYLTS------------CAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALN 310 (393)
T ss_pred ceeEeecChHHH-HHHHHHHHHhccc------------CCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998764322 2222211222221 1334456666666642 3566777889999999999999
Q ss_pred hCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCC-CCceEEEEEeccc
Q 014163 360 KTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSY-PWSTKLRVISHLR 427 (429)
Q Consensus 360 ~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~-~~~~~lRi~~~~~ 427 (429)
+++++.+..++ ...++.|--.+. ..+..+++..|.+ +.|+.+.+...... .+.+++|+|++..
T Consensus 311 ~~~g~~~~~~p-~Ga~Y~~~~i~~-~~d~~~f~~~Ll~---~~gV~v~PG~~Fg~~~g~~~vRis~~~~ 374 (393)
T COG0436 311 EIGGLSVVKPP-EGAFYLFPKIPE-LLDSEEFAKKLLE---EAGVAVVPGSGFGEPPGEGYVRLSLATS 374 (393)
T ss_pred hcCCeeeccCC-CeeEEEEeecCC-CCCHHHHHHHHHH---hCCEEEecccccCCCCCCCeEEEEEecC
Confidence 99989988755 456665543322 2688899988874 66899887633333 4778999998754
No 21
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.97 E-value=3.6e-29 Score=246.71 Aligned_cols=320 Identities=17% Similarity=0.118 Sum_probs=234.0
Q ss_pred cCCChHHHHHHHHHHcCcCCCC-----CccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHH
Q 014163 65 TTWMEPECDKLVMASINKNYVD-----MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (429)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~ 139 (429)
.+++++.+.+++..++.....+ +.......+..+++++.+++++|.+.. ..+++|+|+|+++.+++.++..
T Consensus 25 ~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~----~~i~~t~g~t~~l~~~~~~~~~ 100 (398)
T TIGR03392 25 TALKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDA----ENIVWTRGTTESINLVAQSYAR 100 (398)
T ss_pred ccCCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCC----CeEEEeCChHHHHHHHHHHhhh
Confidence 3345566888887776432221 112223455666889999999998521 1388999999999988887632
Q ss_pred HHHHHHHhcCCCCCCcEEEEcCCCchH----HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCcc
Q 014163 140 KWQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT 215 (429)
Q Consensus 140 ~~~~~~~~~g~~~~~~~vi~~~~~h~s----~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~t 215 (429)
... . .+++|++++++|++ +...++..|++++.+|++.+ +.+|+++|+++++++|++|++++++|+|
T Consensus 101 ~~~----~-----~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~~~~~l~~~i~~~t~lv~i~~~~n~t 170 (398)
T TIGR03392 101 PRL----Q-----PGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGAD-LLPDIRQLPELLTPRTRILALGQMSNVT 170 (398)
T ss_pred ccC----C-----CCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCCC-CCcCHHHHHHHhccCceEEEEECccccc
Confidence 100 0 23689999999976 55677889999999999865 7899999999999999999999999999
Q ss_pred ccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCC
Q 014163 216 GEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDD 295 (429)
Q Consensus 216 G~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~ 295 (429)
|.+.|+++|+++|+++ |+++++|++|+.+..+ .++...++|++++|+|| +++|.|+|+++++++ .
T Consensus 171 G~~~~~~~i~~~~~~~------~~~~ivD~a~~~~~~~-------~~~~~~~~d~~~~s~~K-~~gp~G~G~l~~~~~-~ 235 (398)
T TIGR03392 171 GGCPDLARAITLAHQY------GAVVVVDGAQGVVHGP-------PDVQALDIDFYAFSGHK-LYGPTGIGVLYGKTE-L 235 (398)
T ss_pred cccCCHHHHHHHHHHc------CCEEEEEhhhhcCCCC-------CChhhcCCCEEEEeccc-ccCCCceEEEEEcHH-H
Confidence 9999999999999999 9999999999753321 22222358999999999 457889999987643 2
Q ss_pred cccccccccCCCCCCC----------------CCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHH
Q 014163 296 LPDELVFHINYLGSDQ----------------PTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLE 359 (429)
Q Consensus 296 ~~~~~~~~~~~~~~~~----------------~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~ 359 (429)
. +.+. .+.++.. ..+. .||++...++++.++++.+...|++++.++..++++++.+.|+
T Consensus 236 ~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~e-~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l~~~l~~~l~ 310 (398)
T TIGR03392 236 L-EAMP---PWQGGGKMLSHVSFDGFIPQAVPHRFE-AGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLADLAEERLA 310 (398)
T ss_pred H-hhCC---CeecCCceEeeccccccccCCChhhcc-CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHh
Confidence 2 1111 1111100 0111 4788888889999999988778888889999999999999999
Q ss_pred hCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCC------CCCceEEEEEecc
Q 014163 360 KTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMS------YPWSTKLRVISHL 426 (429)
Q Consensus 360 ~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~------~~~~~~lRi~~~~ 426 (429)
+++++++..++ ..++++|.++ +.+..++.+.|. ++||.++...... .....++|+|++.
T Consensus 311 ~l~g~~~~~~~-~~~i~~~~~~---~~~~~~l~~~L~----~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~~~ 375 (398)
T TIGR03392 311 QLPGFRSFRCP-GSSLLAFDFA---GVHHSDLAALLA----ESGIALRAGQHCAQPLMAALGVSGTLRASFAP 375 (398)
T ss_pred cCCCeEEeCCC-CCcEEEEEeC---CcCHHHHHHHHH----hCCEEEecCccchHHHHHHhCCCCEEEEEeec
Confidence 99889887654 5678888864 345667777776 8999987542110 0113579999953
No 22
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.97 E-value=8e-29 Score=244.48 Aligned_cols=319 Identities=17% Similarity=0.126 Sum_probs=234.9
Q ss_pred cCCChHHHHHHHHHHcCcCCCCC-----ccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHH
Q 014163 65 TTWMEPECDKLVMASINKNYVDM-----DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (429)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~ 139 (429)
.++.++.+.+++..++.....+. ..+....+..+++++.+++++|++.. ..+.+|+|+|+++.+++.++..
T Consensus 28 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~----~~i~~~~~~t~~i~~~~~~~~~ 103 (401)
T PRK10874 28 TALKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDA----KNIVWTRGTTESINLVAQSYAR 103 (401)
T ss_pred ccCCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCC----CEEEEECCHHHHHHHHHHHhhh
Confidence 33455667787777775432221 12234566677899999999999321 2388999999999988887642
Q ss_pred HHHHHHHhcCCCCCCcEEEEcCCCchH----HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCcc
Q 014163 140 KWQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT 215 (429)
Q Consensus 140 ~~~~~~~~~g~~~~~~~vi~~~~~h~s----~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~t 215 (429)
... . .+++|++++++|++ |...++..|++++.+|++.+ +.+|+++++++++++|++|++++++|+|
T Consensus 104 ~~~----~-----~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~i~~~t~lv~i~~~~n~t 173 (401)
T PRK10874 104 PRL----Q-----PGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGAD-RLPDVDLLPELITPRTRILALGQMSNVT 173 (401)
T ss_pred ccC----C-----CcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCCC-CcCCHHHHHHhcCcCcEEEEEeCCcccc
Confidence 100 0 23689999999975 56677889999999999764 7899999999999999999999999999
Q ss_pred ccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCC
Q 014163 216 GEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDD 295 (429)
Q Consensus 216 G~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~ 295 (429)
|.+.|+++|+++|+++ |+++++|++|+.+..+ .++...++|++++++|| +++|.|+|+++++++ .
T Consensus 174 G~~~~~~~i~~l~~~~------g~~~ivD~a~~~g~~~-------~~~~~~~~d~~~~s~~K-~~gp~G~G~l~~~~~-~ 238 (401)
T PRK10874 174 GGCPDLARAITLAHQA------GMVVMVDGAQGAVHFP-------ADVQALDIDFYAFSGHK-LYGPTGIGVLYGKSE-L 238 (401)
T ss_pred cCcCCHHHHHHHHHHc------CCEEEEECCccccccc-------CCchhcCCCEEEEeccc-ccCCCccEEEEEchH-H
Confidence 9999999999999999 9999999999753322 22222359999999999 457889999987643 2
Q ss_pred cccccccccCCCCCC----------------CCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHH
Q 014163 296 LPDELVFHINYLGSD----------------QPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLE 359 (429)
Q Consensus 296 ~~~~~~~~~~~~~~~----------------~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~ 359 (429)
+ +.+. .+.++. ...+. .||++....+++.++++.+...++.+..++..++++++.+.|+
T Consensus 239 ~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~e-~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l~~~l~~~l~ 313 (401)
T PRK10874 239 L-EAMS---PWQGGGKMLTEVSFDGFTPQSAPWRFE-AGTPNVAGVIGLSAALEWLADIDINQAESWSRSLATLAEDALA 313 (401)
T ss_pred H-hcCC---CeecCCcceEeeccCccCCCCChhhcc-CCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHh
Confidence 2 1111 111110 01122 3788877888999999888888888888999999999999999
Q ss_pred hCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCC------CCCceEEEEEec
Q 014163 360 KTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMS------YPWSTKLRVISH 425 (429)
Q Consensus 360 ~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~------~~~~~~lRi~~~ 425 (429)
++++++++.++ ..++++|.+. +.+..++.+.|. ++||.++...... .....++|+|++
T Consensus 314 ~~~g~~~~~~~-~~~i~~~~~~---~~~~~~~~~~L~----~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~~ 377 (401)
T PRK10874 314 KLPGFRSFRCQ-DSSLLAFDFA---GVHHSDLVTLLA----EYGIALRAGQHCAQPLLAALGVTGTLRASFA 377 (401)
T ss_pred cCCCEEEeCCC-CCcEEEEEEC---CcCHHHHHHHHH----HCCcEEeccccchHHHHHHhCCCCEEEEEec
Confidence 99889887654 5678888874 345567777776 8999987642110 011357999998
No 23
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.97 E-value=4.5e-29 Score=246.49 Aligned_cols=320 Identities=17% Similarity=0.126 Sum_probs=235.3
Q ss_pred cCCChHHHHHHHHHHcCc---CCC--CCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHH
Q 014163 65 TTWMEPECDKLVMASINK---NYV--DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (429)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~---~~~--~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~ 139 (429)
.+++++.+.+++..++.. |.. .+..++...+..+++++.+++++|.... ..+++|+|+|+++..++.++..
T Consensus 32 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~----~~v~~t~g~t~~l~~~~~~~~~ 107 (406)
T PRK09295 32 SAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSA----EELVFVRGTTEGINLVANSWGN 107 (406)
T ss_pred cccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCC----CeEEEeCCHHHHHHHHHHHhhh
Confidence 334556677887776653 221 1222344556666899999999998321 2389999999999988776532
Q ss_pred HHHHHHHhcCCCCCCcEEEEcCCCchH----HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCcc
Q 014163 140 KWQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT 215 (429)
Q Consensus 140 ~~~~~~~~~g~~~~~~~vi~~~~~h~s----~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~t 215 (429)
... . .+++|++++.+|++ |...++..|++++.++++++ +.+|+++|+++++++|++|++++++|+|
T Consensus 108 ~~~----~-----~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~i~~~t~lv~l~~~~n~t 177 (406)
T PRK09295 108 SNV----R-----AGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPD-GTLQLETLPALFDERTRLLAITHVSNVL 177 (406)
T ss_pred hcC----C-----CcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCC-CCCCHHHHHHhcCCCcEEEEEecchhcc
Confidence 110 0 23689999998875 56677888999999999865 7899999999999999999999999999
Q ss_pred ccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCC
Q 014163 216 GEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDD 295 (429)
Q Consensus 216 G~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~ 295 (429)
|.+.|+++|+++|+++ |+++++|++|+.+..+ .++...++|++++|+|| +++|.|+|+++++++ .
T Consensus 178 G~~~~~~~i~~~~~~~------~~~vivD~a~~~g~~~-------~~~~~~~~D~~~~s~~K-~~gp~G~G~l~~~~~-~ 242 (406)
T PRK09295 178 GTENPLAEMIALAHQH------GAKVLVDGAQAVMHHP-------VDVQALDCDFYVFSGHK-LYGPTGIGILYVKEA-L 242 (406)
T ss_pred cccCCHHHHHHHHHHc------CCEEEEEcccccCccc-------cCchhcCCCEEEeehhh-ccCCCCcEEEEEchH-h
Confidence 9999999999999999 9999999999764332 23333468999999999 567889999998753 2
Q ss_pred cccccccccCCCCCC-----------------CCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH
Q 014163 296 LPDELVFHINYLGSD-----------------QPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGL 358 (429)
Q Consensus 296 ~~~~~~~~~~~~~~~-----------------~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L 358 (429)
+ +.+. .+.++. ...+ -.||++...++++.++++.+...|++++.++..++++++.+.|
T Consensus 243 ~-~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~r~-e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~l 317 (406)
T PRK09295 243 L-QEMP---PWEGGGSMIATVSLTEGTTWAKAPWRF-EAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQNLMHYALSQL 317 (406)
T ss_pred H-hhCC---CcccCCceeeeeecCCccccCCchhhc-CCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 2 1111 111110 0111 2478888889999999998888889999999999999999999
Q ss_pred HhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCC------CCCceEEEEEec
Q 014163 359 EKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMS------YPWSTKLRVISH 425 (429)
Q Consensus 359 ~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~------~~~~~~lRi~~~ 425 (429)
+++++++++.+..+.++++|.+++ .+..++.+.|. ++||.++...... ......+|+|++
T Consensus 318 ~~~~~~~~~~~~~~~~iv~~~~~~---~~~~~~~~~L~----~~gI~v~~g~~c~~~~~~~~~~~~~iRiS~~ 383 (406)
T PRK09295 318 ESVPDLTLYGPQNRLGVIAFNLGK---HHAYDVGSFLD----NYGIAVRTGHHCAMPLMAYYNVPAMCRASLA 383 (406)
T ss_pred hcCCCEEEeCCCCCceEEEEEECC---cCHHHHHHHHH----hCCeEEeccccchHHHHHHHCCCCEEEEEcc
Confidence 999889988764457899998753 45567766666 8999886431100 011246999987
No 24
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.97 E-value=2.3e-28 Score=239.31 Aligned_cols=320 Identities=17% Similarity=0.137 Sum_probs=233.7
Q ss_pred ChHHHHHHHHHHcCcCCCC--CccCh---hhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHH
Q 014163 68 MEPECDKLVMASINKNYVD--MDEYP---VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQ 142 (429)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~ 142 (429)
+++.+.+++.+++..+..+ +..++ ......+++++++++++|.+.. ..+.+|+|+|+++.+++.+...
T Consensus 12 ~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~----~~v~~~~g~t~al~~~~~~~~~--- 84 (376)
T TIGR01977 12 KPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLFNAPSS----AHVVFTNNATTALNIALKGLLK--- 84 (376)
T ss_pred CCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHhCcCCC----CeEEEeCCHHHHHHHHHHhccC---
Confidence 4456777777666543211 11222 2345566888899999998642 1378999999999988776433
Q ss_pred HHHHhcCCCCCCcEEEEcCCCchHHH----HHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccc
Q 014163 143 QKRKEQGKPYDKPNIVTGANVQVCWE----KFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEF 218 (429)
Q Consensus 143 ~~~~~~g~~~~~~~vi~~~~~h~s~~----~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~ 218 (429)
.+++|+++..+|.++. ..++..|++++.++.+++ +.+|+++++++++++|++|++++++|+||.+
T Consensus 85 ----------~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~ 153 (376)
T TIGR01977 85 ----------EGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNE-GLISPERIKRAIKTNTKLIVVSHASNVTGTI 153 (376)
T ss_pred ----------CCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCC-CCcCHHHHHHhcCCCCeEEEEECCCCCcccc
Confidence 2368999999998753 456667999999998764 7899999999999899999999999999999
Q ss_pred cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCccc
Q 014163 219 EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPD 298 (429)
Q Consensus 219 ~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~ 298 (429)
.|+++|.++|+++ ++++|+|++++.+..++ ++...++|++++++|||+++|.|+|++++++...+..
T Consensus 154 ~~~~~i~~l~~~~------~~~livD~a~~~g~~~~-------~~~~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~ 220 (376)
T TIGR01977 154 LPIEEIGELAQEN------GIFFILDAAQTAGVIPI-------DMTELAIDMLAFTGHKGLLGPQGTGGLYIREGIKLKP 220 (376)
T ss_pred CCHHHHHHHHHHc------CCEEEEEhhhccCccCC-------CchhcCCCEEEecccccccCCCCceEEEEcCCcCcCc
Confidence 9999999999999 99999999998655422 3333579999999999999999999999887642211
Q ss_pred ccccccC----CCCCC---CCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC
Q 014163 299 ELVFHIN----YLGSD---QPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV 371 (429)
Q Consensus 299 ~~~~~~~----~~~~~---~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 371 (429)
....... +.... ...+. .+|++...++++..+++.+...|++.+.++.+++++++.+.|.+.++++++.+..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~r~~-~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~ 299 (376)
T TIGR01977 221 LKSGGTGSHSALIDQPSELPDRFE-SGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPAD 299 (376)
T ss_pred eecCCCccccccccccccchhhcc-CCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCC
Confidence 1100000 00000 00111 2677777788888899998888999999999999999999999998899886421
Q ss_pred ---CceEEEEEecCCCCCCHHHHHHHHHHHHhcc-CceecccCCC--------CCCCceEEEEEecc
Q 014163 372 ---GVPLVAFSLKDSSAHTVFEISEGLRKKLNRF-QVVYPQKLPM--------SYPWSTKLRVISHL 426 (429)
Q Consensus 372 ---~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~-G~~~~~~~~~--------~~~~~~~lRi~~~~ 426 (429)
..++++|.++ +.+..++.+.|. ++ |+.++..... .......+|++++.
T Consensus 300 ~~~~~~~v~~~~~---~~~~~~~~~~L~----~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~ 359 (376)
T TIGR01977 300 PANRVGVVSFTVE---GIDSEEVADILD----EKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGY 359 (376)
T ss_pred ccccCCeEEEEEC---CCCHHHHHHHHh----ccCCEEEEcccccchHHHHHhCCCCCCeEEEecCC
Confidence 4678888874 346677777777 77 8887643110 11234579999764
No 25
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.97 E-value=4.6e-28 Score=237.32 Aligned_cols=299 Identities=13% Similarity=0.038 Sum_probs=221.4
Q ss_pred CChHHHHHHHHHHcCcCCCCCc----cChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMD----EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQ 142 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~ 142 (429)
++++.+.+++..++.....++. .++...++.+++++++++++|++.+ .+++|+|+|+++.+++.++.....
T Consensus 10 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-----~i~~t~~~t~a~~~al~~~~~~~~ 84 (379)
T TIGR03402 10 RVDPEVLEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPD-----EIIFTSGGTESDNTAIKSALAAQP 84 (379)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCC-----eEEEeCcHHHHHHHHHHHHHHhcC
Confidence 4456678887776654322221 1234566677899999999999752 389999999999999887653110
Q ss_pred HHHHhcCCCCCCcEEEEcCCCchHHHHHH---HhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCcccccc
Q 014163 143 QKRKEQGKPYDKPNIVTGANVQVCWEKFA---RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFE 219 (429)
Q Consensus 143 ~~~~~~g~~~~~~~vi~~~~~h~s~~~~~---~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~ 219 (429)
++++|+++..+|+++.... +..|++++.+|++++ +.+|+++++++++++++++++++++|++|.+.
T Consensus 85 ----------~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~-g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~ 153 (379)
T TIGR03402 85 ----------EKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEE-GRLDLEELRAAITDDTALVSVMWANNETGTIF 153 (379)
T ss_pred ----------CCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCCC-CcCCHHHHHHhcCCCcEEEEEEcccCCeeecc
Confidence 1258999999998765433 346999999998765 78999999999999999999999999999999
Q ss_pred ChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccc
Q 014163 220 DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDE 299 (429)
Q Consensus 220 ~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~ 299 (429)
|+++|+++|+++ |+++|+|++|+.+.. +.++...++|++++++|| +++|.|+|++++++...+
T Consensus 154 ~~~~I~~l~~~~------g~~vivD~~~~~g~~-------~~~~~~~~~D~~~~s~~K-~~gp~G~g~l~v~~~~~~--- 216 (379)
T TIGR03402 154 PIEEIGEIAKER------GALFHTDAVQAVGKI-------PIDLKEMNIDMLSLSGHK-LHGPKGVGALYIRKGTRF--- 216 (379)
T ss_pred cHHHHHHHHHHc------CCEEEEECccccccc-------ccCcccCCCCEEEEcHHH-cCCCCceEEEEECCCCCC---
Confidence 999999999999 999999999986433 223333479999999999 678999999998754211
Q ss_pred cccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHh-CCCeEEeeCCC-C-ceEE
Q 014163 300 LVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEK-TGRFEILSKDV-G-VPLV 376 (429)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~-~~~~~~~~~~~-~-~~~v 376 (429)
.+.+.++......-.||.+...++++.++++.+. +.+++..++..++++++.+.|++ ++++++..++. . .+++
T Consensus 217 ---~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 292 (379)
T TIGR03402 217 ---RPLLRGGHQERGRRAGTENVPGIVGLGKAAELAT-EHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTV 292 (379)
T ss_pred ---CCcccCCccCCCcCCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEE
Confidence 1222222211111237887777787888887654 36788888999999999999986 88888876532 2 3577
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHhccCceeccc
Q 014163 377 AFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK 409 (429)
Q Consensus 377 ~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~ 409 (429)
.|.+.. .+..++...|. ++||.++..
T Consensus 293 ~~~~~~---~~~~~~~~~l~----~~gI~v~~g 318 (379)
T TIGR03402 293 NISFEY---IEGEAILLLLD----MEGICASSG 318 (379)
T ss_pred EEEecC---CCHHHHHHhhc----cCCEEEEch
Confidence 777643 45667777776 899998753
No 26
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.97 E-value=3.6e-28 Score=237.70 Aligned_cols=320 Identities=17% Similarity=0.118 Sum_probs=232.1
Q ss_pred CChHHHHHHHHHHcCcCCC-----CCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYV-----DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKW 141 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~ 141 (429)
++++.+.+++...+...+. .+..++...+...++++++++++|.+.. ..+.+|+|+|+++.+++.++....
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~----~~v~~~~g~t~a~~~~~~~l~~~~ 85 (373)
T cd06453 10 QKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFINAPSP----DEIIFTRNTTEAINLVAYGLGRAN 85 (373)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCCCCC----CeEEEeCCHHHHHHHHHHHhhhcC
Confidence 3445566666665532221 1223345667777889999999998721 238899999999999998875410
Q ss_pred HHHHHhcCCCCCCcEEEEcCCCchH----HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCcccc
Q 014163 142 QQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGE 217 (429)
Q Consensus 142 ~~~~~~~g~~~~~~~vi~~~~~h~s----~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~ 217 (429)
..+++|++++++|++ +...++..|++++.|+++++ +.+|++++++++++++++|++++++|++|.
T Consensus 86 ----------~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~ 154 (373)
T cd06453 86 ----------KPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDD-GQLDLEALEKLLTERTKLVAVTHVSNVLGT 154 (373)
T ss_pred ----------CCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCCC-CCcCHHHHHHHhcCCceEEEEeCcccccCC
Confidence 013589999999987 35566788999999999864 789999999999999999999999999999
Q ss_pred ccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcc
Q 014163 218 FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP 297 (429)
Q Consensus 218 ~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~ 297 (429)
+.|+++|.++|+++ ++++|+|++|+.+..++ ++...++|++++++|||+++ .|+|+++++++ .+
T Consensus 155 ~~~~~~i~~~~~~~------~~~li~D~a~~~~~~~~-------~~~~~~~d~~~~s~~K~~~~-~g~g~~~~~~~-~~- 218 (373)
T cd06453 155 INPVKEIGEIAHEA------GVPVLVDGAQSAGHMPV-------DVQDLGCDFLAFSGHKMLGP-TGIGVLYGKEE-LL- 218 (373)
T ss_pred cCCHHHHHHHHHHc------CCEEEEEhhhhcCceee-------eccccCCCEEEeccccccCC-CCcEEEEEchH-Hh-
Confidence 99999999999999 99999999997644322 22223689999999999876 88999887643 22
Q ss_pred cccccc-cCCC-------C-CC----CCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 014163 298 DELVFH-INYL-------G-SD----QPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRF 364 (429)
Q Consensus 298 ~~~~~~-~~~~-------~-~~----~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~ 364 (429)
+.+... ..+. . .. ...+. .+|++...+++++.+++.+...+++++.++..++++++.+.|++++++
T Consensus 219 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~ 297 (373)
T cd06453 219 EEMPPYGGGGEMIEEVSFEETTYADLPHKFE-AGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGV 297 (373)
T ss_pred hcCCCeecCCCccccccccccccCCCccccC-CCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 211110 0000 0 00 00111 257777788899999999888899999999999999999999999888
Q ss_pred EEeeCC-CCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCC------CCCceEEEEEec
Q 014163 365 EILSKD-VGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMS------YPWSTKLRVISH 425 (429)
Q Consensus 365 ~~~~~~-~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~------~~~~~~lRi~~~ 425 (429)
+++.++ ...++++|.++ +.+..++.+.|. ++|+.+....+.. ......+|+|++
T Consensus 298 ~~~~~~~~~~~~~~~~~~---~~~~~~i~~~l~----~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~ 358 (373)
T cd06453 298 RVYGDAEDRAGVVSFNLE---GIHPHDVATILD----QYGIAVRAGHHCAQPLMRRLGVPGTVRASFG 358 (373)
T ss_pred EEeCCccccCCeEEEEEC---CcCHHHHHHHHH----HCCEEeccCccchhHHHHHhCCCCeEEEEec
Confidence 887543 24678888874 245667777777 8999876431110 112357999998
No 27
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.97 E-value=2.8e-28 Score=236.50 Aligned_cols=303 Identities=15% Similarity=0.105 Sum_probs=221.6
Q ss_pred CChHHHHHHHHHHcCcCCCCCcc-----ChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDE-----YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKW 141 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~ 141 (429)
++++.+.+++..++.....++.. +....++.+++++++++++|++.+ .+.+|+|+|+++..++.++....
T Consensus 9 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-----~v~~~~g~t~a~~~~l~~l~~~~ 83 (353)
T TIGR03235 9 PIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEALGADTE-----EVIFTSGATESNNLAILGLARAG 83 (353)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHhCCCCC-----eEEEeCCHHHHHHHHHHHHHHhc
Confidence 45567888887776432222221 223446667899999999999753 38999999999998888765421
Q ss_pred HHHHHhcCCCCCCcEEEEcCCCchHHHHH---HHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccc
Q 014163 142 QQKRKEQGKPYDKPNIVTGANVQVCWEKF---ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEF 218 (429)
Q Consensus 142 ~~~~~~~g~~~~~~~vi~~~~~h~s~~~~---~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~ 218 (429)
...+++.|+++...|+++... ++..|++++.++++++ +.+|+++|++++++++++|++++++|+||.+
T Consensus 84 --------~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~~-~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~ 154 (353)
T TIGR03235 84 --------EQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDES-GRIDVDELADAIRPDTLLVSIMHVNNETGSI 154 (353)
T ss_pred --------ccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCCC-CcCCHHHHHHhCCCCCEEEEEEcccCCceec
Confidence 011225799999999976544 3456999999998865 7899999999999899999999999999999
Q ss_pred cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCccc
Q 014163 219 EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPD 298 (429)
Q Consensus 219 ~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~ 298 (429)
.|+++|+++|+++ |+++|+|++++.+..+ .++...++|++++++||| ++|.|+|+++++++.....
T Consensus 155 ~~~~~I~~l~~~~------~~~~ivD~a~~~g~~~-------~~~~~~~~D~~~~s~~K~-~gp~g~g~l~~~~~~~~~~ 220 (353)
T TIGR03235 155 QPIREIAEVLEAH------EAFFHVDAAQVVGKIT-------VDLSADRIDLISCSGHKI-YGPKGIGALVIRKRGKPKA 220 (353)
T ss_pred cCHHHHHHHHHHc------CCEEEEEchhhcCCcc-------ccccccCCCEEEeehhhc-CCCCceEEEEEccCccccc
Confidence 9999999999999 9999999999865442 233334699999999998 5799999999986532111
Q ss_pred ccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC--CceEE
Q 014163 299 ELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV--GVPLV 376 (429)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--~~~~v 376 (429)
...+.+.++........||.+...++++.++++.+. ++.+++.++..++++++++.|++ .+++++.++. ..+++
T Consensus 221 --~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~-~g~~~~~~~~~~~~~i~ 296 (353)
T TIGR03235 221 --PLKPIMFGGGQERGLRPGTLPVHLIVGMGEAAEIAR-RNAQAWEVKLRAMRNQLRDALQT-LGVKLNGDPAETIPHIL 296 (353)
T ss_pred --ccCceeeCCCCcCccccCCCChHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHhcc-CCeEEeCCcccccCCEE
Confidence 111212221111111237777777888888887654 57888999999999999999988 5699886532 34678
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHhccCceeccc
Q 014163 377 AFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK 409 (429)
Q Consensus 377 ~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~ 409 (429)
+|.++ +.+..++.+.|. + |+.+.+.
T Consensus 297 ~~~~~---~~~~~~v~~~L~----~-~i~v~~g 321 (353)
T TIGR03235 297 NFSID---GVNSEALIVNLR----A-DAAVSTG 321 (353)
T ss_pred EEEeC---CcCHHHHHHHHh----C-CeEEEch
Confidence 88764 456677777776 5 7777654
No 28
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.97 E-value=1.1e-27 Score=234.02 Aligned_cols=319 Identities=18% Similarity=0.141 Sum_probs=238.2
Q ss_pred CChHHHHHHHHHHcCc---CC--CCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINK---NY--VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKW 141 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~ 141 (429)
+.++.+.+.+...+.+ ++ ..+..+....++-+++++.+++++|++++ ...+++.++|+++..++..+...+
T Consensus 10 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~lg~~~~----~~v~~~~~~t~a~~~~~~~l~~~~ 85 (371)
T PF00266_consen 10 PMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLLGAPPD----EEVVFTSNGTEALNAVASSLLNPL 85 (371)
T ss_dssp B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHHTSSTT----EEEEEESSHHHHHHHHHHHHHHHG
T ss_pred CCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhcCCccc----cccccccccchhhhhhhhcccccc
Confidence 4456677777766543 22 12233455677777999999999999872 237899999999999888885432
Q ss_pred HHHHHhcCCCCCCcEEEEcCCCchHH----HHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCcccc
Q 014163 142 QQKRKEQGKPYDKPNIVTGANVQVCW----EKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGE 217 (429)
Q Consensus 142 ~~~~~~~g~~~~~~~vi~~~~~h~s~----~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~ 217 (429)
. .+++|+++...|++. ..+++..|++++.++.+.+ +.+|+++++++|++++++|++++.+|.+|.
T Consensus 86 ~----------~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~-~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~ 154 (371)
T PF00266_consen 86 K----------PGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPG-GSLDLEDLEEALNPDTRLVSISHVENSTGV 154 (371)
T ss_dssp T----------TTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTT-SSCSHHHHHHHHHTTESEEEEESBETTTTB
T ss_pred c----------cccccccccccccccccccccccccchhhhcccccccc-chhhhhhhhhhhccccceEEeecccccccE
Confidence 1 236899999999874 4566678999999999875 789999999999999999999999999999
Q ss_pred ccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcc
Q 014163 218 FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP 297 (429)
Q Consensus 218 ~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~ 297 (429)
+.|+++|+++||++ ++++++|++++.+..+ .++...++|++++++|| +++|.|+|+++++++. .
T Consensus 155 ~~pi~~I~~~~~~~------~~~~~vD~~~~~g~~~-------id~~~~~~D~~~~s~~K-l~gp~G~g~l~v~~~~-~- 218 (371)
T PF00266_consen 155 RNPIEEIAKLAHEY------GALLVVDAAQSAGCVP-------IDLDELGADFLVFSSHK-LGGPPGLGFLYVRPEA-I- 218 (371)
T ss_dssp BSSHHHHHHHHHHT------TSEEEEE-TTTTTTSS---------TTTTTESEEEEESTS-TTSSSTEEEEEEEHHH-H-
T ss_pred Eeeeceehhhhhcc------CCceeEechhcccccc-------ccccccccceeeecccc-cCCCCchhhheehhhh-h-
Confidence 99999999999999 9999999999876542 34444579999999999 8899999999998732 1
Q ss_pred cccccccCCCCCC---------------CCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 014163 298 DELVFHINYLGSD---------------QPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTG 362 (429)
Q Consensus 298 ~~~~~~~~~~~~~---------------~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~ 362 (429)
..+ .+...+.. ...+. .||++...++++..+++.+...|++++.++..++++++.+.|++++
T Consensus 219 ~~~--~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~ 295 (371)
T PF00266_consen 219 ERL--RPAKPGGGYLDFPSLQEYGLADDARRFE-GGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELP 295 (371)
T ss_dssp HHH--HTSSSSSSTTTHHHHHHHCHHSTTTGSS-SSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hcc--ccccccccccccccchhccccccccccc-ccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCC
Confidence 111 11111111 01111 4788888888899999999888999999999999999999999999
Q ss_pred CeEEeeCC---CCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCC------CCCceEEEEEecc
Q 014163 363 RFEILSKD---VGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMS------YPWSTKLRVISHL 426 (429)
Q Consensus 363 ~~~~~~~~---~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~------~~~~~~lRi~~~~ 426 (429)
+++++.+. .+.++++|.+. +.+..++.+.|. ++||.+....... ..-...+|||++.
T Consensus 296 ~~~~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~L~----~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~ 361 (371)
T PF00266_consen 296 GIEVLGPDDEPRRPSIVSFNLP---GSDADDVVKYLE----ERGIAVSTGSACAGPSLDILGMGGVIRVSLHY 361 (371)
T ss_dssp TEEESSSSCGGBGTTEEEEEET---TSSHHHHHHHHH----HHTEEEEESTTTCHHHHHHHHTTTEEEEE-GT
T ss_pred ceeEeeecccccccceEEEeec---CCCHHHHHHHHh----hcCEEEeccCcccHHHHHHhCCCCEEEEeccC
Confidence 88887642 26789999984 457788888888 8899987531110 0011579999863
No 29
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.97 E-value=2.2e-27 Score=237.76 Aligned_cols=358 Identities=13% Similarity=0.088 Sum_probs=239.5
Q ss_pred CCCCCCCCCHHHHHHHHHHhhccCCC--CCccccccccCC-ChHHHHHHHHHHc-CcCCCCC---ccChhhHHHHHHHHH
Q 014163 30 FKMPDNSMPKEAAYQVINDELMLDGN--PRLNLASFVTTW-MEPECDKLVMASI-NKNYVDM---DEYPVTTELQNRCVN 102 (429)
Q Consensus 30 ~~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~---~~~~~~~~le~~~~~ 102 (429)
..+|+ .++.++++++.+....+.. ..| ++.+.++. .+|.+.+.+.+.. ..+...| ..+++..+++.++.+
T Consensus 44 ~~~~~--~se~~~~~~~~~l~~~n~~~~~~~-~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~ 120 (481)
T PRK04366 44 PELPE--VSELEVVRHYTRLSQKNYGVDTGF-YPLGSCTMKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQE 120 (481)
T ss_pred CCCCC--CCHHHHHHHHHHHHhcCCCCCcce-ecCcccCCCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHH
Confidence 35666 8999999999988765433 223 44553443 4566666665541 1233444 356788899999999
Q ss_pred HHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEe
Q 014163 103 MIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVK 182 (429)
Q Consensus 103 ~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~ 182 (429)
++++++|++. ..+..++|+.+...++..++.... .+|. ..+++|+++++.|+++...++..|++++.+|
T Consensus 121 ~la~l~G~~~------~~l~~~~GA~a~~~~l~~~r~~~~----~~Gd-~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~ 189 (481)
T PRK04366 121 WLKEITGMDA------VTLQPAAGAHGELTGLLMIRAYHE----ARGD-TKRTEVIVPDSAHGTNPASAAMAGFKVVEIP 189 (481)
T ss_pred HHHHHhCCCc------eEEEeCcHHHHHHHHHHHHHHHhh----ccCc-CCCCEEEEcCCccHhHHHHHHHcCCEEEEee
Confidence 9999999973 133444555555544443322111 0110 1235899999999999999999999999999
Q ss_pred ccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccc-cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc
Q 014163 183 LEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEF-EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW 261 (429)
Q Consensus 183 ~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~-~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~ 261 (429)
++++ +.+|+++|+++++++|++|++++|+ ++|.+ +|+++|+++|+++ |+|+|||+|+..+.+...
T Consensus 190 ~~~~-~~~D~e~L~~~i~~~t~~V~v~~Pn-~tG~~~~dl~eI~~~a~~~------gal~iVD~a~~~~~~g~~------ 255 (481)
T PRK04366 190 SNED-GLVDLEALKAAVGEDTAALMLTNPN-TLGLFERNILEIAEIVHEA------GGLLYYDGANLNAILGKA------ 255 (481)
T ss_pred cCCC-CCcCHHHHHhhcccCCeEEEEeCCC-CccccchHHHHHHHHHHHc------CCEEEEEecChhhhcccC------
Confidence 9764 8999999999999999999999987 89988 5899999999999 999999999964322111
Q ss_pred ccCCCCeeEEEEcCcccCCCCCC-----eEEEEEeCCCCcccccccc------cCCCCCCCCCce----eccCCchhHHH
Q 014163 262 DFRLPLVKSINVSGHKYGLVYAG-----VGWVVWRTKDDLPDELVFH------INYLGSDQPTFT----LNFSKGSSQII 326 (429)
Q Consensus 262 ~~~~~~~d~~~~s~hK~~~~p~g-----~g~l~~~~~~~~~~~~~~~------~~~~~~~~~~~~----~~~tr~~~~~~ 326 (429)
+.+..++|++++++|||+++|.| +|+++++++ .. +.+... ..|......... -.+|.....++
T Consensus 256 ~~~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~-~~-~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~ 333 (481)
T PRK04366 256 RPGDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEE-LA-PFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLV 333 (481)
T ss_pred CccccCCCEEEEechhhcCCCCCCCCCCeeeeeehhh-hH-hhCCCCeeeccCCceeecccccccCCCcccccCchHHHH
Confidence 12234799999999999987754 468887653 21 211100 001000000000 01222345567
Q ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEec--CCCCCCHHHHHHHHHHHHhccCc
Q 014163 327 AQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLK--DSSAHTVFEISEGLRKKLNRFQV 404 (429)
Q Consensus 327 ~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~--~~~~~~~~~~~~~L~~~l~~~G~ 404 (429)
+.|..+..+|.+|++++.++...+++||.++|+++ +++..+.+..+.+.|... ...+.+..++.++|. ++|+
T Consensus 334 ~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~L~----~~Gi 407 (481)
T PRK04366 334 RAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI--YDLPYDRPCMHEFVLSGKKLKETGVRTLDIAKRLL----DYGF 407 (481)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh--CcccCCCCeeEEEEEECccccccCCCHHHHHHHHH----HCCc
Confidence 88888899999999999999999999999999987 333332223344445432 112356778888888 9999
Q ss_pred eeccc-CCCCCCCceEEEEEec
Q 014163 405 VYPQK-LPMSYPWSTKLRVISH 425 (429)
Q Consensus 405 ~~~~~-~~~~~~~~~~lRi~~~ 425 (429)
.+... .|... ...+|+|++
T Consensus 408 ~~~~~~~p~~~--~~~l~is~~ 427 (481)
T PRK04366 408 HPPTIYFPLIV--PEALMIEPT 427 (481)
T ss_pred cCCcccccccc--CCeEEEccc
Confidence 87643 22222 345898875
No 30
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.97 E-value=1.1e-27 Score=236.50 Aligned_cols=323 Identities=16% Similarity=0.085 Sum_probs=231.3
Q ss_pred cCCChHHHHHHHHHHcCcCCCC-----CccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHH
Q 014163 65 TTWMEPECDKLVMASINKNYVD-----MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (429)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~ 139 (429)
.+++++.+.+++..++.....+ +..+....+..+++++.+++++|.+.. ..+.+|+|+|+++.+++.++..
T Consensus 27 ~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~----~~v~~~~g~t~~l~~~~~~~~~ 102 (403)
T TIGR01979 27 TSQKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASD----EEIVFTRGTTESINLVAYSWGD 102 (403)
T ss_pred ccCCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCC----CeEEEeCCHHHHHHHHHHHhhh
Confidence 3344556777777666432221 112233445556888999999999731 1388999999999888877532
Q ss_pred HHHHHHHhcCCCCCCcEEEEcCCCchH----HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCcc
Q 014163 140 KWQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT 215 (429)
Q Consensus 140 ~~~~~~~~~g~~~~~~~vi~~~~~h~s----~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~t 215 (429)
... ..+++|+++++.|++ +..+++..|++++.++++++ +.+|+++++++++++|++|++++++|+|
T Consensus 103 ~~~---------~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~l~~~i~~~~~lv~~~~~~~~t 172 (403)
T TIGR01979 103 SNL---------KAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDD-GTLDLDDLEKLLTEKTKLVAITHVSNVL 172 (403)
T ss_pred hcC---------CCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecCCC-CCCCHHHHHHHhccCCeEEEEEcccccc
Confidence 110 023689999999876 45677788999999999865 7899999999999999999999999999
Q ss_pred ccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCC
Q 014163 216 GEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDD 295 (429)
Q Consensus 216 G~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~ 295 (429)
|.+.|+++|+++|+++ |+++|+|++|+.+..+ .++...++|++++++||++ +|.|+|+++++++ .
T Consensus 173 G~~~~~~~i~~~~~~~------~~~~ivD~a~~~g~~~-------~~~~~~~~d~~~~s~~K~~-gp~G~g~l~~~~~-~ 237 (403)
T TIGR01979 173 GTVNPVEEIAKLAHQV------GAKVLVDGAQAVPHMP-------VDVQALDCDFYVFSGHKMY-GPTGIGVLYGKEE-L 237 (403)
T ss_pred cccCCHHHHHHHHHHc------CCEEEEEchhhcCccc-------cCccccCCCEEEEeccccc-CCCCceEEEEchH-H
Confidence 9999999999999999 9999999999764432 2232236899999999975 6889999988643 2
Q ss_pred ccccccccc-CC------CC-C-C----CCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 014163 296 LPDELVFHI-NY------LG-S-D----QPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTG 362 (429)
Q Consensus 296 ~~~~~~~~~-~~------~~-~-~----~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~ 362 (429)
. +.+.... .+ .. . . ...+ -.||++...++++..+++.+...|++++.++..++++++.+.|++++
T Consensus 238 ~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~ 315 (403)
T TIGR01979 238 L-EQMPPFLGGGEMIAEVSFEETTYNEAPHKF-EAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHELTAYALERLGEIP 315 (403)
T ss_pred H-hcCCCeecCCCceeecccCccccCCChhhc-CCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCC
Confidence 2 2111000 00 00 0 0 0011 13677777788888999888777888999999999999999999998
Q ss_pred CeEEeeCCC---CceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCC---C---CCCCceEEEEEec
Q 014163 363 RFEILSKDV---GVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLP---M---SYPWSTKLRVISH 425 (429)
Q Consensus 363 ~~~~~~~~~---~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~---~---~~~~~~~lRi~~~ 425 (429)
+++++.+.. +.++++|.+++ .+..++.+.|. ++||.++.... + ......++|+|++
T Consensus 316 g~~~~~~~~~~~~~~~v~~~~~~---~~~~~~~~~L~----~~gI~v~~g~~~~~~~~~~~~~~~~iRiS~~ 380 (403)
T TIGR01979 316 GLRIYGPRDAEDRGGIISFNVEG---VHPHDVGTILD----EEGIAVRSGHHCAQPLMRRFGVPATCRASFY 380 (403)
T ss_pred CEEEeCCCCccccCceEEEEeCC---cCHHHHHHHHh----hCCEEEcchhhhhHHHHHHhCCCCEEEEEec
Confidence 899886531 46789998743 35566766666 89998864210 0 0111357999987
No 31
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.97 E-value=1.9e-27 Score=234.43 Aligned_cols=327 Identities=14% Similarity=0.078 Sum_probs=230.4
Q ss_pred cccccCCChHHHHHHHHHHcCcCCC----CCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHH
Q 014163 61 ASFVTTWMEPECDKLVMASINKNYV----DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (429)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a 136 (429)
....+.++++.+.+++.+++..... .|.......++.+++++.+++++|.+.+ ..++++|+++++..++.+
T Consensus 22 ~~~~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~-----~v~~~~~~t~~l~~~~~~ 96 (397)
T TIGR01976 22 DNPAGTQIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPP-----EVVFGANATSLTFLLSRA 96 (397)
T ss_pred cCCccCCCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCC-----eEEEeCCHHHHHHHHHHH
Confidence 3333445566788887777654322 1222334556777999999999998752 388899999998877666
Q ss_pred HHHHHHHHHHhcCCCCCCcEEEEcCCCchHH----HHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCC
Q 014163 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCW----EKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGS 212 (429)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~----~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~ 212 (429)
...... .+++|+++++.|++. ..+++..|++++.++++++++.+|+++++++++++|++|++++++
T Consensus 97 ~~~~~~----------~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~i~~~~~lv~i~~~~ 166 (397)
T TIGR01976 97 ISRRWG----------PGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEATGELHPDDLASLLSPRTRLVAVTAAS 166 (397)
T ss_pred HHhcCC----------CCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEeccccCCCcCHHHHHHhcCCCceEEEEeCCC
Confidence 532110 236899999999763 456788899999999876347899999999999999999999999
Q ss_pred CccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeC
Q 014163 213 TLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (429)
Q Consensus 213 ~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~ 292 (429)
|++|.+.|+++|+++|+++ |+++++|++++.+.. ..++...++|++++++|||++ | ++|++++++
T Consensus 167 n~tG~~~~~~~i~~~~~~~------~~~~ivD~a~~~~~~-------~~~~~~~~~d~~~~s~~K~~g-~-~~G~l~~~~ 231 (397)
T TIGR01976 167 NTLGSIVDLAAITELVHAA------GALVVVDAVHYAPHG-------LIDVQATGADFLTCSAYKFFG-P-HMGILWGRP 231 (397)
T ss_pred CCCCccCCHHHHHHHHHHc------CCEEEEehhhhcccc-------CCCHHHcCCCEEEEechhhcC-C-ceEEEEEcH
Confidence 9999999999999999999 999999999964322 122222368999999999974 3 488888764
Q ss_pred CCCcccccccccCCCCCCC-CCceeccCCchhHHHHHHHHHHHcCHHH--------------HHHHHHHHHHHHHHHHHH
Q 014163 293 KDDLPDELVFHINYLGSDQ-PTFTLNFSKGSSQIIAQYYQFIRLGFEG--------------YKNIMENCMGNARALREG 357 (429)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~-~~~~~~~tr~~~~~~~~~~al~~l~~~g--------------~~~~~~~~~~~~~~l~~~ 357 (429)
+ ...........|..... ..+. .||++...++++.++++.+...| +++..++..++++++++.
T Consensus 232 ~-~~~~l~~~~~~~~~~~~~~~~~-~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 309 (397)
T TIGR01976 232 E-LLMNLPPYKLTFSYDTGPERFE-LGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAEYLLVG 309 (397)
T ss_pred H-HHhhCCCccccCccCCCcchhc-CCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 3 22111111112221111 1121 47888777888888887764433 677788889999999999
Q ss_pred HHhCCCeEEeeCC---CCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceeccc-CCC-------CC-CCceEEEEEec
Q 014163 358 LEKTGRFEILSKD---VGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK-LPM-------SY-PWSTKLRVISH 425 (429)
Q Consensus 358 L~~~~~~~~~~~~---~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~-~~~-------~~-~~~~~lRi~~~ 425 (429)
|+++++++++.+. ...+++.|.+. +.+..++.++|. ++||.++.. ... .. .....+|||++
T Consensus 310 L~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~L~----~~gI~v~~~~~~~~~~~~~~~~~~~~~~iRis~~ 382 (397)
T TIGR01976 310 LSDLPGVTLYGVARLAARVPTVSFTVH---GLPPQRVVRRLA----DQGIDAWAGHFYAVRLLRRLGLNDEGGVVRVGLA 382 (397)
T ss_pred HhcCCCEEEeCCCCccCCCceEEEEeC---CcCHHHHHHHHH----HCCeEEEeCccchHHHHHHhCCCCCCCeEEEEee
Confidence 9999889888651 25678888764 245567777777 899998764 110 11 13357999995
Q ss_pred c
Q 014163 426 L 426 (429)
Q Consensus 426 ~ 426 (429)
.
T Consensus 383 ~ 383 (397)
T TIGR01976 383 H 383 (397)
T ss_pred c
Confidence 3
No 32
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.97 E-value=4.2e-27 Score=230.72 Aligned_cols=301 Identities=14% Similarity=0.078 Sum_probs=215.3
Q ss_pred CCChHHHHHHHHHHcCcCCCCCc---cC--hhhHHHHHHHHHHHHHhhCC-CCCCCCCCCceEeCCchHHHHHHHHHHHH
Q 014163 66 TWMEPECDKLVMASINKNYVDMD---EY--PVTTELQNRCVNMIAHLFNT-PVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (429)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~le~~~~~~la~l~g~-~~~~~~~~~~~~t~g~t~a~~~al~a~~~ 139 (429)
+++++.+.+++..++...+.++. .+ +....++ +.+..+.+.+|. ++ ..+++|+|+|+++.+++.++..
T Consensus 9 ~~~~~~v~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~-~a~~~~~~~~~~~~~-----~~i~~t~g~teal~~~~~~~~~ 82 (382)
T TIGR03403 9 TMLDPKVKELMDPFFCDIYGNPNSLHQFGTATHPAIA-EALDKLYKGINARDL-----DDIIITSCATESNNWVLKGVYF 82 (382)
T ss_pred CCCCHHHHHHHHHHHHhcCcCCccccHHHHHHHHHHH-HHHHHHHHHcCcCCC-----CeEEEeCCHHHHHHHHHHHHHH
Confidence 35556788888877765333221 11 2344555 444555556776 33 2389999999999998887632
Q ss_pred HHHHHHHhcCCCCCCcEEEEcCCCchHHHHH---HHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccc
Q 014163 140 KWQQKRKEQGKPYDKPNIVTGANVQVCWEKF---ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (429)
Q Consensus 140 ~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~---~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG 216 (429)
.... ..++++|+++...|+++... ++..|++++.+|++++ +.+|+++|+++++++|++|++++++|+||
T Consensus 83 ~~~~-------~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~~-g~~d~~~l~~~i~~~t~lv~~~~~~n~tG 154 (382)
T TIGR03403 83 DEIL-------KGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQ-GTITAEQVREAITEKTALVSVMWANNETG 154 (382)
T ss_pred hhcc-------cCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCCC-CCCCHHHHHHhcccCCeEEEEEcccCCCc
Confidence 1000 00135799999999876554 4567999999999865 78999999999999999999999999999
Q ss_pred cccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCc
Q 014163 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDL 296 (429)
Q Consensus 217 ~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~ 296 (429)
.+.|+++|.++|+++ |+++|+|++++.+..+ .++...++|++++++||| ++|.|+|++++|+...+
T Consensus 155 ~~~~~~~I~~la~~~------g~~~ivD~a~~~g~~~-------~~~~~~~~D~~~~s~~K~-~gp~G~g~l~vr~~~~~ 220 (382)
T TIGR03403 155 MIFPIKEIGEICKER------GVLFHTDAVQAIGKIP-------VDVQKAGVDFLSFSAHKF-HGPKGVGGLYIRKGVEL 220 (382)
T ss_pred cccCHHHHHHHHHHc------CCEEEEechhhcCCCc-------cCccccCCCEEEEcchhh-CCCCceEEEEECCCCCC
Confidence 999999999999999 9999999999754332 233334699999999998 57999999998865321
Q ss_pred ccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC-C-ce
Q 014163 297 PDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV-G-VP 374 (429)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~-~~ 374 (429)
.+.+.++........||.+...++++..+++.+. +.+++..++..++++++.+.|+++++++++.+.. + .+
T Consensus 221 ------~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~ 293 (382)
T TIGR03403 221 ------TPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLAN-EYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPN 293 (382)
T ss_pred ------CCcccCCCCCCCcccCCcChHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCC
Confidence 1112111111111237777767777777776543 3577888999999999999999999899886532 2 45
Q ss_pred EEEEEecCCCCCCHHHHHHHHHHHHhccCceecc
Q 014163 375 LVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQ 408 (429)
Q Consensus 375 ~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~ 408 (429)
+++|.++ +.+..++...|. ++||.++.
T Consensus 294 ~~~~~~~---~~~~~~~~~~L~----~~gI~v~~ 320 (382)
T TIGR03403 294 TILISIK---GVEGEAMLWDLN----KAGIAAST 320 (382)
T ss_pred EEEEEeC---CCCHHHHHHhhc----cCCEEEEc
Confidence 7788764 345667776666 99999985
No 33
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.96 E-value=1.8e-27 Score=236.41 Aligned_cols=328 Identities=17% Similarity=0.096 Sum_probs=232.9
Q ss_pred ccccccCCChHHHHHHHHHHcCcCCCC---Ccc--ChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHH
Q 014163 60 LASFVTTWMEPECDKLVMASINKNYVD---MDE--YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (429)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al 134 (429)
|-...++++++.+.+++..++.....+ +.. +....+..+++++.+++++|.+.. ..+++|+|+|+++..++
T Consensus 36 Ld~a~~~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~----~~v~~t~g~t~al~~i~ 111 (424)
T PLN02855 36 LDNAATSQKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTS----REIVFTRNATEAINLVA 111 (424)
T ss_pred eeCccccCCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCC----CEEEEeCCHHHHHHHHH
Confidence 333334445566778777665432111 111 223344556888999999999531 13899999999998887
Q ss_pred HHHHHHHHHHHHhcCCCCCCcEEEEcCCCchH----HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEee
Q 014163 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAIL 210 (429)
Q Consensus 135 ~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s----~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~ 210 (429)
.++..... . .+++|+++.+.|++ |...++..|++++.++++++ +.+|++++++.++++|++|++++
T Consensus 112 ~~~~~~~~----~-----~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~-~~~~~~~l~~~i~~~t~lv~i~~ 181 (424)
T PLN02855 112 YTWGLANL----K-----PGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPD-EVLDVEQLKELLSEKTKLVATHH 181 (424)
T ss_pred HHhhhhcC----C-----CcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCC-CCcCHHHHHHHhccCceEEEEeC
Confidence 75421000 0 13689999998875 56667888999999999765 56999999999999999999999
Q ss_pred CCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEE
Q 014163 211 GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVW 290 (429)
Q Consensus 211 ~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~ 290 (429)
++|+||.+.|+++|+++|+++ |+++++|++|+.+..+ .++...++|++++++||+ ++|.|+|++++
T Consensus 182 ~~n~tG~~~~~~~I~~l~~~~------g~~vivD~a~~~g~~~-------~~~~~~~~d~~~~s~~K~-~gp~G~G~l~~ 247 (424)
T PLN02855 182 VSNVLGSILPVEDIVHWAHAV------GAKVLVDACQSVPHMP-------VDVQTLGADFLVASSHKM-CGPTGIGFLWG 247 (424)
T ss_pred ccccccccCCHHHHHHHHHHc------CCEEEEEhhhhcCCcC-------CCchhcCCCEEEeecccc-cCCCccEEEEE
Confidence 999999999999999999999 9999999999754322 233334689999999994 67889999998
Q ss_pred eCCCCccccccccc-C-------CCCC-----CCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Q 014163 291 RTKDDLPDELVFHI-N-------YLGS-----DQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREG 357 (429)
Q Consensus 291 ~~~~~~~~~~~~~~-~-------~~~~-----~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~ 357 (429)
+++ .+ +.+.... . |... ....+. .||++...++++.++++.+...|++++.++..++++++++.
T Consensus 248 ~~~-~~-~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e-~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~~ 324 (424)
T PLN02855 248 KSD-LL-ESMPPFLGGGEMISDVFLDHSTYAPPPSRFE-AGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVELGTYLYEK 324 (424)
T ss_pred chh-hh-hcCCCEecCCCceeeeecCccccCCChhhcc-CCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 753 22 1111100 0 0000 011122 47888888888999999888889999999999999999999
Q ss_pred HHhCCCeEEeeCC-----CCceEEEEEecCCCCCCHHHHHHHHHHHHhcc-CceecccCCC-----C-CCCceEEEEEec
Q 014163 358 LEKTGRFEILSKD-----VGVPLVAFSLKDSSAHTVFEISEGLRKKLNRF-QVVYPQKLPM-----S-YPWSTKLRVISH 425 (429)
Q Consensus 358 L~~~~~~~~~~~~-----~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~-G~~~~~~~~~-----~-~~~~~~lRi~~~ 425 (429)
|+++++++++.+. .+.++++|.+++ .+..++.+.|. ++ ||.++..... . ..-..++|+|++
T Consensus 325 L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~---~~~~~v~~~L~----~~~gI~v~~g~~c~~~~~~~~g~~~~iRiS~~ 397 (424)
T PLN02855 325 LSSVPGVRIYGPKPSEGVGRAALCAFNVEG---IHPTDLSTFLD----QQHGVAIRSGHHCAQPLHRYLGVNASARASLY 397 (424)
T ss_pred HhcCCCEEEeCCCcccccCcccEEEEEECC---cCHHHHHHHhc----ccCCEEEechhhhhHHHHHHhCCCCeEEEEec
Confidence 9999889998653 145789998753 45567777776 77 9988743100 0 011246999995
No 34
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.96 E-value=3.9e-27 Score=232.24 Aligned_cols=271 Identities=17% Similarity=0.132 Sum_probs=200.7
Q ss_pred cCCChHHHHHHHHHHcCcCCCCCcc-----ChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHH
Q 014163 65 TTWMEPECDKLVMASINKNYVDMDE-----YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (429)
Q Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~ 139 (429)
+.+.++.+.+++..++...+.++.. +....+..+++++.+++++|++++ .+.+|+|+|+++.+++.++..
T Consensus 12 ~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-----~v~~~~g~t~a~~~~l~~l~~ 86 (402)
T TIGR02006 12 TTPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSR-----EIVFTSGATESNNLAIKGIAH 86 (402)
T ss_pred CCCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC-----eEEEeCCHHHHHHHHHHHHHH
Confidence 3355667888877766433332221 112245566888999999998753 389999999999998877643
Q ss_pred HHHHHHHhcCCCCCCcEEEEcCCCchHHHHHH---HhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccc
Q 014163 140 KWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA---RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (429)
Q Consensus 140 ~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~---~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG 216 (429)
... ..+++|+++..+|.++..++ +..|++++.+|++++ +.+|+++|++++++++++|++++++|++|
T Consensus 87 ~~~---------~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~l~~~~~lv~v~~~~n~tG 156 (402)
T TIGR02006 87 FYK---------SKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPKSN-GLIDLEELKAAIRDDTILVSIMHVNNEIG 156 (402)
T ss_pred hhc---------CCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccCCC-CcCCHHHHHHhcCCCCEEEEEECCCcCce
Confidence 110 02368999999999866554 445999999998865 78999999999999999999999999999
Q ss_pred cccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCc
Q 014163 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDL 296 (429)
Q Consensus 217 ~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~ 296 (429)
.+.|+++|+++|+++ |+++|||++++.+..+ .++...++|++++++||+ ++|.|+|+++++++...
T Consensus 157 ~~~~~~~I~~l~~~~------g~~livD~a~a~g~~~-------~~~~~~~~D~~~~s~~K~-~gp~G~G~l~~~~~~~~ 222 (402)
T TIGR02006 157 VIQDIAAIGEICRER------KVFFHVDAAQSVGKIP-------INVNELKVDLMSISGHKI-YGPKGIGALYVRRKPRV 222 (402)
T ss_pred ecccHHHHHHHHHHc------CCEEEEEcchhcCCcc-------cCccccCCCEEEEehhhh-cCCCceEEEEEccCCCC
Confidence 999999999999999 9999999999865432 233334799999999996 57999999999864322
Q ss_pred ccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeC
Q 014163 297 PDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSK 369 (429)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 369 (429)
. + .+.+.++......-.||.+...++++..+++.+. ++++++.++..++++++.+.|++++++.+..+
T Consensus 223 -~-~--~~~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~-~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~ 290 (402)
T TIGR02006 223 -R-L--EALIHGGGHERGMRSGTLPTHQIVGMGEAFRIAK-EEMAQDTAHVLALRDRLLNGIKSIEEVYLNGD 290 (402)
T ss_pred -C-C--CceecCCCccCCccCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCC
Confidence 1 1 1111111111111237777777777878887664 46788889999999999999999988888754
No 35
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.96 E-value=1.7e-26 Score=231.00 Aligned_cols=353 Identities=17% Similarity=0.143 Sum_probs=233.5
Q ss_pred hhhcCCCCCCCCCCCCHHHHHHHHHHhhccCC----CCCccccccccCCChHH-HHHHHH--HHcCc-CCCCCccChhhH
Q 014163 23 VRAAIPRFKMPDNSMPKEAAYQVINDELMLDG----NPRLNLASFVTTWMEPE-CDKLVM--ASINK-NYVDMDEYPVTT 94 (429)
Q Consensus 23 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~-~~~~~~~~~~~~ 94 (429)
++...+ .++|+.+ +..++++++.+....+. ++. +++.++++...|. +.+... ..+.. +......+++..
T Consensus 35 ~~~~~~-~~lp~~~-~~~~v~~~~~~~~~~~~~~~~~~~-~lg~g~~~~~~p~~~~~~~~~~~~~~~y~~~~~~~~~g~~ 111 (447)
T PRK00451 35 LRLKRP-LDLPPGL-SEMELLRHLRELAAKNKTAEEYPS-FLGAGAYDHYIPAVVDHIISRSEFYTAYTPYQPEISQGTL 111 (447)
T ss_pred HHhCCC-CCCCCCC-CHHHHHHHHHHHHhcCCCcCcCcc-cCcccccCCcCcHHHHHHHhchhHHHhcCCCCCccchHHH
Confidence 344444 3788875 99999999888764331 333 3666677665554 333321 11111 121223366777
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHh-
Q 014163 95 ELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARY- 173 (429)
Q Consensus 95 ~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~- 173 (429)
+...+...++++++|++.+ .+.+|+|+|+++..++++.... .+++|+++++.|+++..+++.
T Consensus 112 ~~~~e~~~~la~l~g~~~~-----~v~~~~g~t~~~~~~~~a~~~~------------~g~~Vlv~~~~~~~~~~~~~~~ 174 (447)
T PRK00451 112 QAIFEYQTMICELTGMDVA-----NASMYDGATALAEAALMAVRIT------------KRKKVLVSGAVHPEYREVLKTY 174 (447)
T ss_pred HHHHHHHHHHHHHhCCCcc-----eEEecCcHHHHHHHHHHHHHhc------------CCCEEEEeCccCHHHHHHHHHH
Confidence 7777888999999999863 3789999998887666665321 236899999999988877654
Q ss_pred ---cCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEe--ecccc
Q 014163 174 ---FEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV--DAASG 248 (429)
Q Consensus 174 ---~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~v--D~a~~ 248 (429)
.|++++.+|++++ .+|+++|+++++++|++|+++++ |+||.++|+++|+++|+++ |+|+++ |.+..
T Consensus 175 ~~~~G~~~~~v~~~~~--~~d~~~l~~~i~~~t~~v~l~~p-n~tG~v~~l~~I~~~a~~~------~~~~iv~~d~~~~ 245 (447)
T PRK00451 175 LKGQGIEVVEVPYEDG--VTDLEALEAAVDDDTAAVVVQYP-NFFGVIEDLEEIAEIAHAG------GALFIVGVDPVSL 245 (447)
T ss_pred HHhCCcEEEEecCCCC--CCCHHHHHHhcCCCeEEEEEECC-CCCCeeCCHHHHHHHHHHC------CCEEEEEcChHHh
Confidence 6999999998764 79999999999999999999998 8899999999999999999 999998 65433
Q ss_pred cccccccCCCCccccCCCCeeEEEEcCccc----CCCCCCeEEEEEeCCCCcccccccc-----------cCC-------
Q 014163 249 GFIAPFLYPDLEWDFRLPLVKSINVSGHKY----GLVYAGVGWVVWRTKDDLPDELVFH-----------INY------- 306 (429)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~----~~~p~g~g~l~~~~~~~~~~~~~~~-----------~~~------- 306 (429)
+. ... ....++|+++.++||| .++++|+|+++++++ .. +.+... ..|
T Consensus 246 g~----~~~-----~~~~~~D~~~~s~~k~~~~~~~~Gpg~G~l~~~~~-~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~ 314 (447)
T PRK00451 246 GL----LKP-----PGEYGADIVVGEGQPLGIPLSFGGPYLGFFATRKK-LV-RQMPGRLVGETVDADGKRGFVLTLQAR 314 (447)
T ss_pred cc----CCC-----cccCCCCEEEECCCcCCCCCCCCCCCchHHHhhHH-HH-hhCCCCEeeeecccCCCeeeEeecccc
Confidence 21 110 1224699999999997 345668999887643 22 111000 000
Q ss_pred ---CCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCC
Q 014163 307 ---LGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDS 383 (429)
Q Consensus 307 ---~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~ 383 (429)
......+. ..+++.....++.+.+++.++.+|++++.++..++++++.+.|+++++++++ .......+++++.
T Consensus 315 ~~~~~~~~~~~-~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~~~~~~~v~~~-- 390 (447)
T PRK00451 315 EQHIRREKATS-NICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELF-DGPFFNEFVVRLP-- 390 (447)
T ss_pred ccccccccccc-cccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEec-CCCeEEEEEEecC--
Confidence 00000000 0122222222445556677889999999999999999999999999888886 2223344555542
Q ss_pred CCCCHHHHHHHHHHHHhccCceeccc-CCCCCCCceEEEEEec
Q 014163 384 SAHTVFEISEGLRKKLNRFQVVYPQK-LPMSYPWSTKLRVISH 425 (429)
Q Consensus 384 ~~~~~~~~~~~L~~~l~~~G~~~~~~-~~~~~~~~~~lRi~~~ 425 (429)
.+..++.++|. ++|+..... .+....-...+|+|++
T Consensus 391 --~~~~~~~~~L~----~~gi~~~~~~~~~~~~~~~~~rvs~~ 427 (447)
T PRK00451 391 --KPAEEVNEALL----EKGILGGYDLGRYYPELGNHLLVCVT 427 (447)
T ss_pred --CCHHHHHHHHH----hcCCCCCcccccccCCcCCEEEEecC
Confidence 24567777777 888764311 1111011246999985
No 36
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.96 E-value=7.9e-27 Score=229.53 Aligned_cols=313 Identities=13% Similarity=0.054 Sum_probs=228.5
Q ss_pred ChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHh
Q 014163 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (429)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~ 147 (429)
.++.+.+++..... ++ .++...++.+++++++++++|.+.+ ...++++++|+++..++....+
T Consensus 20 ~~~~V~~a~~~~~~----~~-~~~~~~~~~~~~~~~l~~~~g~~~~----~~vi~~~~gt~a~~~a~~~~~~-------- 82 (401)
T PLN02409 20 IPERVLRAMNRPNE----DH-RSPAFPALTKELLEDVKYIFKTKSG----TPFIFPTTGTGAWESALTNTLS-------- 82 (401)
T ss_pred CCHHHHHHhcCCCC----CC-CCHHHHHHHHHHHHHHHHHhCCCCC----CEEEEeCCcHHHHHHHHHhcCC--------
Confidence 34556666544321 11 3667888899999999999999753 2378888999998877766533
Q ss_pred cCCCCCCcEEEEcCCCchH--HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhh----CCeEEEEeeCCCccccccCh
Q 014163 148 QGKPYDKPNIVTGANVQVC--WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE----NTICVAAILGSTLTGEFEDV 221 (429)
Q Consensus 148 ~g~~~~~~~vi~~~~~h~s--~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~----~~~~v~~~~~~~~tG~~~~l 221 (429)
.+++|+++++.|++ |...++..|++++.++.+++ ..+|++++++++++ ++++|++++++|+||.+.|+
T Consensus 83 -----~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~~~~-~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~ 156 (401)
T PLN02409 83 -----PGDKVVSFRIGQFSLLWIDQMQRLNFDVDVVESPWG-QGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDL 156 (401)
T ss_pred -----CCCEEEEeCCCchhHHHHHHHHHcCCceEEEECCCC-CCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCH
Confidence 23689999988876 45778889999999998765 45899999999986 68999999999999999999
Q ss_pred HHHHHH--HHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccc
Q 014163 222 KLLHDL--LTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDE 299 (429)
Q Consensus 222 ~~I~~l--a~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~ 299 (429)
++|+++ |+++ |++++||++++.+.. +.++...++|++++++|||+++|.|+|+++++++ .+ +.
T Consensus 157 ~~i~~l~~~~~~------g~~~vvD~v~s~g~~-------~id~~~~~~D~~~~s~~K~l~~P~G~G~l~~~~~-~~-~~ 221 (401)
T PLN02409 157 AGVRKLLDCAQH------PALLLVDGVSSIGAL-------DFRMDEWGVDVALTGSQKALSLPTGLGIVCASPK-AL-EA 221 (401)
T ss_pred HHHHHHHhhhcc------CcEEEEEcccccCCc-------cccccccCccEEEEcCccccCcCCCcceeEECHH-HH-HH
Confidence 999999 9999 999999999975433 2233334699999999999999999999998653 22 11
Q ss_pred ccc---ccCCCC------CCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCC
Q 014163 300 LVF---HINYLG------SDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKD 370 (429)
Q Consensus 300 ~~~---~~~~~~------~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 370 (429)
+.. ...|.. .........+|++....+++..+++.+...|++++.++..++++++++.|++++ ++++.+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~g-~~~~~~~ 300 (401)
T PLN02409 222 SKTAKSPRVFFDWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAWG-LKLCTKK 300 (401)
T ss_pred HhcCCCCCeecCHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcC-CeeccCC
Confidence 111 011111 000000013577767788888999988888999999999999999999999885 8888653
Q ss_pred C--Cc-eEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEecc
Q 014163 371 V--GV-PLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHL 426 (429)
Q Consensus 371 ~--~~-~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~ 426 (429)
+ .. .+++|+++. +.+..++.+.|.+ +.|+.+.... . .....++||+.+-
T Consensus 301 ~~~~s~~v~~~~~p~--~~~~~~l~~~l~~---~~~i~i~~G~-~-~~~~~~~Rig~~g 352 (401)
T PLN02409 301 PEWRSDTVTAVVVPE--GIDSAEIVKNAWK---KYNLSLGLGL-N-KVAGKVFRIGHLG 352 (401)
T ss_pred hhhcccceEEEeCCC--CCCHHHHHHHHHH---hCCEEEEcCC-C-cccCCEEEEcCCC
Confidence 2 23 456676642 5677778777652 6688876431 1 1234579998753
No 37
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.96 E-value=1.2e-26 Score=225.49 Aligned_cols=311 Identities=18% Similarity=0.153 Sum_probs=224.0
Q ss_pred ChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHh
Q 014163 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (429)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~ 147 (429)
.++.+.+++...+. . ..++...++.+++++++++++|++.. ...++|.++|+|+.+++.++..
T Consensus 10 ~~~~v~~a~~~~~~----~-~~~~~~~~~~~~~~~~la~~~g~~~~----~~~~~~~~~t~al~~~~~~~~~-------- 72 (356)
T cd06451 10 VPPRVLKAMNRPML----G-HRSPEFLALMDEILEGLRYVFQTENG----LTFLLSGSGTGAMEAALSNLLE-------- 72 (356)
T ss_pred CCHHHHHHhCCCcc----C-CCCHHHHHHHHHHHHHHHHHhcCCCC----CEEEEecCcHHHHHHHHHHhCC--------
Confidence 44566666643321 1 24566777788999999999999542 2367888889999988887643
Q ss_pred cCCCCCCcEEEEcCCCchH--HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhh-CCeEEEEeeCCCccccccChHHH
Q 014163 148 QGKPYDKPNIVTGANVQVC--WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLL 224 (429)
Q Consensus 148 ~g~~~~~~~vi~~~~~h~s--~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~tG~~~~l~~I 224 (429)
.+++|+++.+.|++ +...++..|++++.+|++++ +.+|++++++.+++ ++++|++++++|++|.+.|+++|
T Consensus 73 -----~g~~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~i 146 (356)
T cd06451 73 -----PGDKVLVGVNGVFGDRWADMAERYGADVDVVEKPWG-EAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGI 146 (356)
T ss_pred -----CCCEEEEecCCchhHHHHHHHHHhCCCeEEeecCCC-CCCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHHH
Confidence 13588888888876 56778889999999999864 78999999999987 89999999999999999999999
Q ss_pred HHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCccccccc--
Q 014163 225 HDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVF-- 302 (429)
Q Consensus 225 ~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~-- 302 (429)
+++|+++ |+++++|++|+.+..+ .++...++|++..++|||+++|.|+|+++.+++ .. ..+..
T Consensus 147 ~~~a~~~------~~~li~D~~~~~g~~~-------~~~~~~~~d~~~~s~~K~l~~p~g~G~l~~~~~-~~-~~~~~~~ 211 (356)
T cd06451 147 GALAKKH------DALLIVDAVSSLGGEP-------FRMDEWGVDVAYTGSQKALGAPPGLGPIAFSER-AL-ERIKKKT 211 (356)
T ss_pred HHHHHhc------CCEEEEeeehhccCcc-------ccccccCccEEEecCchhccCCCCcceeEECHH-HH-HHHHhcC
Confidence 9999999 9999999998743321 122223589999999999999999999998653 22 22111
Q ss_pred -ccCCCCC-------CCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC-Cc
Q 014163 303 -HINYLGS-------DQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV-GV 373 (429)
Q Consensus 303 -~~~~~~~-------~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~ 373 (429)
...|... ....+...++.+.....++.++++.+...++++..++..++++++.+.|.+.+ ++++.++. ..
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~ 290 (356)
T cd06451 212 KPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEALG-LKLLAKPELRS 290 (356)
T ss_pred CCCceeecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcC-CeeccCcccCC
Confidence 1111100 00000122455545566777888888888899999999999999999999985 88875432 23
Q ss_pred eEE-EEEecCCCCCCHHHHHHHHHHHHhcc-CceecccCCCCCCCceEEEEEec
Q 014163 374 PLV-AFSLKDSSAHTVFEISEGLRKKLNRF-QVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 374 ~~v-~f~~~~~~~~~~~~~~~~L~~~l~~~-G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
+.+ .+..++ +.+..++.+.|. ++ ||.+....+. ....++|+|++
T Consensus 291 ~~~~~~~~~~--~~~~~~~~~~L~----~~~gI~~~~g~~~--~~~~~iRis~~ 336 (356)
T cd06451 291 PTVTAVLVPE--GVDGDEVVRRLM----KRYNIEIAGGLGP--TAGKVFRIGHM 336 (356)
T ss_pred CceEEEECCC--CCCHHHHHHHHH----HhCCEEEeccccc--ccCCEEEEecC
Confidence 444 344432 457788888888 88 9988754221 12347999985
No 38
>PRK02948 cysteine desulfurase; Provisional
Probab=99.96 E-value=7.1e-26 Score=222.00 Aligned_cols=299 Identities=14% Similarity=0.055 Sum_probs=214.4
Q ss_pred CChHHHHHHHHHHcCcCCCCC----ccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDM----DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQ 142 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~ 142 (429)
++++.+.+++..++...+.++ ..+.....+.+++++.+++++|.+++ .+.+|+|+|+++..++.++.....
T Consensus 11 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-----~i~~~~g~t~a~~~~~~~~~~~~~ 85 (381)
T PRK02948 11 PMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMIGGEEQ-----GIYFTSGGTESNYLAIQSLLNALP 85 (381)
T ss_pred CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHhCCCCC-----eEEEeCcHHHHHHHHHHHHHHhcc
Confidence 455667888777665432222 22334556777899999999998752 388999999999988887754210
Q ss_pred HHHHhcCCCCCCcEEEEcCCCchHHHHH---HHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCcccccc
Q 014163 143 QKRKEQGKPYDKPNIVTGANVQVCWEKF---ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFE 219 (429)
Q Consensus 143 ~~~~~~g~~~~~~~vi~~~~~h~s~~~~---~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~ 219 (429)
..+++|+++...|+++... ++..|++++.+|++++ +.+|+++|++++++++++|++++++|+||.+.
T Consensus 86 ---------~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~~-~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~ 155 (381)
T PRK02948 86 ---------QNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDKS-GLIRLVDLERAITPDTVLASIQHANSEIGTIQ 155 (381)
T ss_pred ---------CCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCCC-CCCCHHHHHHhcCCCCEEEEEECCcCCcEeeh
Confidence 0235899999999876554 5667999999998865 78999999999998999999999999999999
Q ss_pred ChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccc
Q 014163 220 DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDE 299 (429)
Q Consensus 220 ~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~ 299 (429)
|+++|.++|+++ ++++|+|++++.+..+ .++...++|++++++||++ +|.|+|++++++......
T Consensus 156 ~~~~I~~l~~~~------~~~vivD~~~~~g~~~-------~~~~~~~~d~~~~s~~K~~-gp~G~G~l~~~~~~~~~~- 220 (381)
T PRK02948 156 PIAEIGALLKKY------NVLFHSDCVQTFGKLP-------IDVFEMGIDSLSVSAHKIY-GPKGVGAVYINPQVRWKP- 220 (381)
T ss_pred hHHHHHHHHHHc------CCEEEEEChhhccccc-------cCcccCCCCEEEecHHhcC-CCCcEEEEEEcCCCCCCC-
Confidence 999999999999 9999999988653322 2232346999999999974 689999998865321110
Q ss_pred cccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeC--CC--CceE
Q 014163 300 LVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSK--DV--GVPL 375 (429)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~~--~~~~ 375 (429)
...+.........+|.+...++++.++++.+. +.+++..++..++++++.+.|++++ +++... +. ...+
T Consensus 221 -----~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~-~~v~~~~~~~~~~~~i 293 (381)
T PRK02948 221 -----VFPGTTHEKGFRPGTVNVPGIAAFLTAAENIL-KNMQEESLRFKELRSYFLEQIQTLP-LPIEVEGHSTSCLPHI 293 (381)
T ss_pred -----cccCCCCCCCcCCCCccHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEeCCCccCcCCE
Confidence 11111111111236777677777777776543 3578888999999999999999986 544322 11 2346
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHhccCceeccc
Q 014163 376 VAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK 409 (429)
Q Consensus 376 v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~ 409 (429)
+.|.++ +.+..++...|. ++||.++..
T Consensus 294 ~~~~~~---~~~~~~~~~~l~----~~gI~v~~g 320 (381)
T PRK02948 294 IGVTIK---GIEGQYTMLECN----RRGIAISTG 320 (381)
T ss_pred EEEEeC---CCCHHHHHHhcc----cCCEEEEch
Confidence 777764 345566776666 899999854
No 39
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.96 E-value=8.8e-26 Score=234.34 Aligned_cols=355 Identities=11% Similarity=0.036 Sum_probs=250.8
Q ss_pred CHHHHHHHHHHhhccCCC--CCccccccccCCChHHHHHHHHHHcCc----CCCCCc-cChhhHHHHHHHHHHHHHhhCC
Q 014163 38 PKEAAYQVINDELMLDGN--PRLNLASFVTTWMEPECDKLVMASINK----NYVDMD-EYPVTTELQNRCVNMIAHLFNT 110 (429)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~le~~~~~~la~l~g~ 110 (429)
++.++++++.....++-. ..| ++.+..+...+.+.+.+....+. .+..+. .+++..+++.++..|+++++|+
T Consensus 467 sE~e~~r~~~~L~~kn~~~~~~f-i~lGsctmk~na~v~~l~~s~~ef~t~hPyqPe~~sqG~lq~i~elq~~l~eltGm 545 (939)
T TIGR00461 467 SETEMLRYLHRLESKDLALNNSM-IPLGSCTMKLNATAEMMPITWPEFSNIHPFQPSNQVEGYQELIAQLEKWLCSITGF 545 (939)
T ss_pred CHHHHHHHHHHHHhcCCCccccC-CCCccCCCccCHHHHHHHhcchhhcCcCCCCchHHhHHHHHHHHHHHHHHHHHHCC
Confidence 888999998887665432 122 23333333334444444333332 223333 5678999999999999999999
Q ss_pred CCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCcccc
Q 014163 111 PVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVM 190 (429)
Q Consensus 111 ~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~ 190 (429)
+. .+...++|++|...++++++..+.. .|. ..+.+|++|..+|.+....++..|++++.||++++ |.+
T Consensus 546 d~------~Sl~p~aGA~gE~agL~aiR~y~~~----rge-~~R~~vlip~saHgtnPasa~~~G~~Vv~V~~d~~-G~i 613 (939)
T TIGR00461 546 DA------ISLQPNSGAQGEYAGLRVIRSYHES----RGE-NHRNICLIPVSAHGTNPASAAMAGMQVVPVNCDQD-GNI 613 (939)
T ss_pred CC------cccCCchHHHHHHHHHHHHHHHHHh----cCC-CCCCEEEEEccccCcCHHHHHHCCCEEEEeccCCC-CCc
Confidence 84 3677788899998888888764321 121 13468999999999888889999999999999865 899
Q ss_pred CHHHHHHHhhh---CCeEEEEeeCCCccccccC-hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCC
Q 014163 191 NPVKAVELVDE---NTICVAAILGSTLTGEFED-VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLP 266 (429)
Q Consensus 191 d~~~l~~~i~~---~~~~v~~~~~~~~tG~~~~-l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 266 (429)
|+++|++++++ ++++|++++|+| +|.++| +++|+++||++ |.+++||+|+........ +.+..
T Consensus 614 Dle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~------G~~v~VDgAq~~al~~l~------~Pg~~ 680 (939)
T TIGR00461 614 DLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPTIQHACDIVHSF------GGQVYLDGANMNAQVGLT------SPGDL 680 (939)
T ss_pred CHHHHHHHHhhcCCceEEEEEEeCCc-CceecccHHHHHHHHHHc------CCEEEEEecChhhCCCCC------Ccccc
Confidence 99999999984 789999999999 699877 99999999999 999999999954222111 11335
Q ss_pred CeeEEEEcCcccCC-----CCCCeEEEEEeCCCCccccccccc---CCCC-CCCC--Ccee-ccCCchhHHHHHHHHHHH
Q 014163 267 LVKSINVSGHKYGL-----VYAGVGWVVWRTKDDLPDELVFHI---NYLG-SDQP--TFTL-NFSKGSSQIIAQYYQFIR 334 (429)
Q Consensus 267 ~~d~~~~s~hK~~~-----~p~g~g~l~~~~~~~~~~~~~~~~---~~~~-~~~~--~~~~-~~tr~~~~~~~~~~al~~ 334 (429)
++|++.++.||+++ +|+|+|++++++. +...+.-.. .+-. +... ..+. .++.++...+..|+.++.
T Consensus 681 GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~--L~~~lPg~~v~~t~d~~greq~Iga~s~~~~g~a~~~l~a~~yi~~ 758 (939)
T TIGR00461 681 GADVCHLNLHKTFCIPHGGGGPGMGPIGVKSH--LIPFLPKHDVVSMITGIGGSKSIGSVSAAPYGSASILPISWMYIKM 758 (939)
T ss_pred CCCEEEecCCccCCCCCCCCCCCeEEEEEhhh--chhhcCCCcccccccCCCCccccccccccccCcHHHHHHHHHHHHH
Confidence 79999999999888 5556699999852 322221110 0000 0000 0111 145556677899999999
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCC---CCceEEEEEecCC---CCCCHHHHHHHHHHHHhccCceecc
Q 014163 335 LGFEGYKNIMENCMGNARALREGLEKTGRFEILSKD---VGVPLVAFSLKDS---SAHTVFEISEGLRKKLNRFQVVYPQ 408 (429)
Q Consensus 335 l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~---~~~~~v~f~~~~~---~~~~~~~~~~~L~~~l~~~G~~~~~ 408 (429)
+|.+|+++..+....+++|+.++|++. ++++.+. ...+.++|++++. .+....+++++|. +.|+...+
T Consensus 759 lG~~GL~~~a~~ailnAnYl~~rL~~~--~~~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~dIakrL~----d~G~hapt 832 (939)
T TIGR00461 759 MGNEGLPKASVVAILNANYMATRLKDH--YPILFVGTLKHVAHECILDLRPLKAKTGIEAIDVAKRLQ----DYGFHAPT 832 (939)
T ss_pred HCHHHHHHHHHHHHHHHHHHHHHhhcc--CcccccCCCCceeEEEEEeccchhhhcCCCHHHHHHHHH----hCCeeccc
Confidence 999999999999999999999999883 5666542 1356788888641 2466778888888 99998654
Q ss_pred cCCCCCCCceEEEEEeccc
Q 014163 409 KLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 409 ~~~~~~~~~~~lRi~~~~~ 427 (429)
.. ....+.-++|.|-...
T Consensus 833 ~~-~pv~g~lmiepTE~es 850 (939)
T TIGR00461 833 LS-FPVPGTLMVEPTESES 850 (939)
T ss_pred cC-CccCCeEEEEeeccCC
Confidence 32 1245677888886543
No 40
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.95 E-value=3.8e-26 Score=222.47 Aligned_cols=297 Identities=15% Similarity=0.080 Sum_probs=211.3
Q ss_pred hhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchH-HHH
Q 014163 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC-WEK 169 (429)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s-~~~ 169 (429)
+...++.+++++.+++++|++++. ....+|.|+|+++..++.++..+ ++..++++...|.. +..
T Consensus 31 ~~~~~~~~~~r~~la~l~~~~~~~---~~i~~t~~~t~al~~~~~~l~~~------------~~~vlv~~~~~~~~~~~~ 95 (363)
T TIGR02326 31 SDYNIVVEQIRQQLLALATAEEGY---TSVLLQGSGTFAVEAVIGSAVPK------------DGKLLVVINGAYGARIVQ 95 (363)
T ss_pred hHHHHHHHHHHHHHHHHhCCCCCc---eEEEEcCCCHHHHHHHHHhcCCC------------CCeEEEEeCChhhHHHHH
Confidence 455666678999999999997521 13789999999999888776431 12345556666655 467
Q ss_pred HHHhcCceeEEEeccCCccccCHHHHHHHhhhC--CeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeeccc
Q 014163 170 FARYFEVELKEVKLEEGYYVMNPVKAVELVDEN--TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAAS 247 (429)
Q Consensus 170 ~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~--~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~ 247 (429)
.++..|++++.++++++ +.+|+++++++++++ +++|.+++++|+||.+.|+++|+++|+++ |++++||+++
T Consensus 96 ~a~~~g~~~~~v~~~~~-~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~------g~~livD~~~ 168 (363)
T TIGR02326 96 IAEYLGIPHHVVDTGEV-EPPDVVEVEAILAADPAITHIALVHCETTTGILNPIEAVAKLAHRH------GKVTIVDAMS 168 (363)
T ss_pred HHHHcCCceEEEeCCCC-CCCCHHHHHHHHhhCCCccEEEEEeecCCccccCcHHHHHHHHHHc------CCEEEEEccc
Confidence 78889999999999865 689999999999864 46788999999999999999999999999 9999999998
Q ss_pred ccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCC-C-------CCCCCceeccC
Q 014163 248 GGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYL-G-------SDQPTFTLNFS 319 (429)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~t 319 (429)
+.+..+ .++...++|++++++|||+++|.|+|+++++++. +.........+. . .....-...+|
T Consensus 169 ~~g~~~-------~~~~~~~~D~~~~s~~K~l~~p~G~G~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ft 240 (363)
T TIGR02326 169 SFGGIP-------IDIAELHIDYLISSANKCIQGVPGFGFVIARQAE-LAACKGNARSLSLDLYDQWRCMEDNHGKWRFT 240 (363)
T ss_pred cccCcc-------cchhhcCccEEEecCccccccCCcceEEEECHHH-HHHhhcCCCceeecHHHHHHHHhccCCCCCCC
Confidence 754332 2333336899999999999999999999987542 211100000000 0 00000001135
Q ss_pred CchhHHHHHHHHHHHcCHH-HHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC-Cce-EEEEEecCCCCCCHHHHHHHHH
Q 014163 320 KGSSQIIAQYYQFIRLGFE-GYKNIMENCMGNARALREGLEKTGRFEILSKDV-GVP-LVAFSLKDSSAHTVFEISEGLR 396 (429)
Q Consensus 320 r~~~~~~~~~~al~~l~~~-g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~-~v~f~~~~~~~~~~~~~~~~L~ 396 (429)
.+....+++..+++.+..+ +++++.++..++++++.+.|++++ ++++.++. +.+ +++|.+++....+..++.+.|.
T Consensus 241 ~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~ 319 (363)
T TIGR02326 241 SPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRALG-FEPLLDDEIQSPIITSFYSPEDPDYRFADFYQRLK 319 (363)
T ss_pred CcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcC-CeeccCcccCCceEEEEECCCCCCCCHHHHHHHHH
Confidence 5566777788888777555 588899999999999999999985 77765431 344 4567664321256677778887
Q ss_pred HHHhccCceecccCCCCCCCceEEEEEec
Q 014163 397 KKLNRFQVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 397 ~~l~~~G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
++|+.++.... .....+||+++
T Consensus 320 ----~~gi~v~~g~~---~~~~~iRi~~~ 341 (363)
T TIGR02326 320 ----EQGFVIYPGKV---SQVDCFRIGNI 341 (363)
T ss_pred ----HCCEEEECCcC---CCCCEEEEecC
Confidence 89999875422 12357999964
No 41
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.95 E-value=9.3e-26 Score=222.56 Aligned_cols=343 Identities=16% Similarity=0.094 Sum_probs=225.2
Q ss_pred HHHHHHHHhhccC---CCCCccccccccCCChHH-HHHHHHHHcCcCCCCCcc-----ChhhHHHHHHHHHHHHHhhCCC
Q 014163 41 AAYQVINDELMLD---GNPRLNLASFVTTWMEPE-CDKLVMASINKNYVDMDE-----YPVTTELQNRCVNMIAHLFNTP 111 (429)
Q Consensus 41 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~le~~~~~~la~l~g~~ 111 (429)
++++++...-..+ .++..+++.+.+++++|. +.++...+ .....|.. +.+..++.+++++++++++|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~~ 80 (398)
T cd00613 3 EVLRHLKRLASKNKALDQSMSFLGSGTYKHNPPAVIKRNILEN--EFYTAYTPYQPEISQGRLQALFELQTMLCELTGMD 80 (398)
T ss_pred HHHHHHHHHHhcCcCcccCcccccccccCCcCcHHHHHHhccc--cCcccCCCCChhhhhhHHHHHHHHHHHHHHHHCCC
Confidence 5677766643322 223356788888877766 44444444 22122332 5678899999999999999987
Q ss_pred CCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcC----ceeEEEeccCCc
Q 014163 112 VADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFE----VELKEVKLEEGY 187 (429)
Q Consensus 112 ~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G----~~v~~v~~~~~~ 187 (429)
.+ ...++.+++.+...++.+++.. .+ .+++|+++++.|.++...+..+| ++++.+|++++
T Consensus 81 ~~-----~v~~~~~g~~~~~~~~~~~~~~-------~~---~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~~- 144 (398)
T cd00613 81 VA-----NASLQDEATAAAEAAGLAAIRA-------YH---KRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDEG- 144 (398)
T ss_pred cc-----ceeccCchHHHHHHHHHHHHhc-------cc---CCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCCC-
Confidence 42 2556665555544454444331 10 13689999999999888888777 99999998754
Q ss_pred cccCHHHHHHHhhhCCeEEEEeeCCCccccccCh-HHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCC
Q 014163 188 YVMNPVKAVELVDENTICVAAILGSTLTGEFEDV-KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLP 266 (429)
Q Consensus 188 ~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l-~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 266 (429)
+.+|+++|+++++++|++|++++++ ++|.+.|+ ++|+++|+++ |+|+|+|++|+.+.. . .+.+..
T Consensus 145 ~~~d~~~l~~~i~~~t~~viv~~~~-~~G~~~~~l~~i~~la~~~------g~~livD~~~~~~~~--~-----~~~~~~ 210 (398)
T cd00613 145 GTVDLEALKEEVSEEVAALMVQYPN-TLGVFEDLIKEIADIAHSA------GALVYVDGDNLNLTG--L-----KPPGEY 210 (398)
T ss_pred CCcCHHHHHHhcCCCeEEEEEECCC-CCceecchHHHHHHHHHhc------CCEEEEEeccccccC--C-----CChHHc
Confidence 6899999999999999999999986 78999885 9999999999 999999999864322 1 111123
Q ss_pred CeeEEEEcCcccCCC----CCCeEEEEEeCCCCcccccccc-cCCCCC-----------C---------CCCceeccCCc
Q 014163 267 LVKSINVSGHKYGLV----YAGVGWVVWRTKDDLPDELVFH-INYLGS-----------D---------QPTFTLNFSKG 321 (429)
Q Consensus 267 ~~d~~~~s~hK~~~~----p~g~g~l~~~~~~~~~~~~~~~-~~~~~~-----------~---------~~~~~~~~tr~ 321 (429)
++|+++.++|||+++ ++++|++++++. .. +.+... ..+... . ..+.. ..+..
T Consensus 211 ~~d~~~~s~~K~~~p~g~Ggp~~g~l~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~-~~~~~ 287 (398)
T cd00613 211 GADIVVGNLQKTGVPHGGGGPGAGFFAVKKE-LV-RFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSN-ICTGQ 287 (398)
T ss_pred CCCEEEeeccccCCCCCCCCCceeEEEEhhh-hH-hhCCCCeeccccccCCCcceEEecccchhhccccccccc-ceecH
Confidence 699999999999832 467888887542 22 211110 000000 0 00000 01222
Q ss_pred hhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhc
Q 014163 322 SSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNR 401 (429)
Q Consensus 322 ~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~ 401 (429)
.......++++..++.++++++.++.+++++++.+.|++++...... ....+.++|+++...+.+..++.+.|. +
T Consensus 288 ~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~L~----~ 362 (398)
T cd00613 288 ALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVLPFN-GPFFHEFVLRLPPLYGIRAEDLAKALI----D 362 (398)
T ss_pred HHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCC-CCeeEEEEEEcCCcchHHHHHHHHhhh----h
Confidence 23445566677778888999999999999999999999987544221 123455677764311234566777776 8
Q ss_pred cCceecccCCCCCCCceEEEEEecc
Q 014163 402 FQVVYPQKLPMSYPWSTKLRVISHL 426 (429)
Q Consensus 402 ~G~~~~~~~~~~~~~~~~lRi~~~~ 426 (429)
+|+.+.... ..+...+|++.+.
T Consensus 363 ~gi~~~~~~---~~~~~~lRis~~~ 384 (398)
T cd00613 363 GGFHAPTMY---LPVDGTLMIEPTE 384 (398)
T ss_pred cCccccccc---cCCCCeEEEEcCC
Confidence 998764311 2344679998753
No 42
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.95 E-value=1.3e-25 Score=220.17 Aligned_cols=310 Identities=14% Similarity=0.068 Sum_probs=210.4
Q ss_pred CChHHHHHHHHHHcCcCCC----CCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYV----DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQ 142 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~ 142 (429)
++++.+.+++.++...... .+..........+++++.+++++|.+. ..+++|+++|+..++.++..
T Consensus 31 p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~g~~~-------~~~~~g~t~a~~~al~~l~~--- 100 (387)
T PRK09331 31 ILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFLGMDE-------ARVTHGAREGKFAVMHSLCK--- 100 (387)
T ss_pred CCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHhCCCc-------EEEeCCHHHHHHHHHHHhcC---
Confidence 4556777887776633111 111112223345577788999999964 67899999999998888754
Q ss_pred HHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEec--cCCccccCHHHHHHHhhh-------CCeEEEEeeCCC
Q 014163 143 QKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL--EEGYYVMNPVKAVELVDE-------NTICVAAILGST 213 (429)
Q Consensus 143 ~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~--~~~~~~~d~~~l~~~i~~-------~~~~v~~~~~~~ 213 (429)
.+++|+++..+|++...+++..|++++.+|. +++ +.+|++++++++++ ++++|+++++++
T Consensus 101 ----------~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~-~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~ 169 (387)
T PRK09331 101 ----------KGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPE-YKITPEAYAEKIEEVKEETGKPPALALLTHVDG 169 (387)
T ss_pred ----------CCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcC-CCcCHHHHHHHHHHhhhccCCCCEEEEEECCCC
Confidence 2368999999999988888999999999998 444 78999999999974 589999999999
Q ss_pred ccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCC
Q 014163 214 LTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (429)
Q Consensus 214 ~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~ 293 (429)
++|.+.|+++|+++|+++ |+++|||+||+.+..++ +....++|++++++||++++|.|+|++++++
T Consensus 170 ~tG~~~~l~~I~~la~~~------g~~livD~a~~~g~~~~-------~~~~~g~D~~~~s~~K~l~~~~~~G~l~~~~- 235 (387)
T PRK09331 170 NYGNLADAKKVAKVAHEY------GIPFLLNGAYTVGRMPV-------DGKKLGADFIVGSGHKSMAASAPSGVLATTE- 235 (387)
T ss_pred CCcccccHHHHHHHHHHc------CCEEEEECCcccCCcCC-------CHHHcCCCEEEeeCcccccCCCCEEEEEECH-
Confidence 999999999999999999 99999999998654332 2212368999999999999999999988764
Q ss_pred CCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCC-CC
Q 014163 294 DDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKD-VG 372 (429)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~ 372 (429)
+...........|....... +.++.+....+++++++..+... .+.+++..++++++++.|+++++++++.+. ..
T Consensus 236 ~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~aal~~~~~~--~~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~ 311 (387)
T PRK09331 236 EYADKVFRTSRKFGVKEVEL--LGCTLRGAPLVTLMASFPHVVER--VKRWDEEVKKARWFVDELEKIEGFKQLGEKPRN 311 (387)
T ss_pred HHHhhcccccCCCcccceee--eceecCchHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHhcCCCEEEeccCcCc
Confidence 22222111111121110000 11222223455555666543322 235566778899999999999779988532 24
Q ss_pred ceEEEEEecCC------CCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEe
Q 014163 373 VPLVAFSLKDS------SAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVIS 424 (429)
Q Consensus 373 ~~~v~f~~~~~------~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~ 424 (429)
.+++.+..+.. ...+..++.+.|. ++|+.... . .....+|++.
T Consensus 312 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~----~~gI~~~~---~--~~~~i~ri~~ 360 (387)
T PRK09331 312 HDLMKFETPSFDEIAKKHKRRGFFLYEELK----KRGIHGIK---P--GATKEFKLST 360 (387)
T ss_pred CCeEEEeCCchhHHhhhccccchhHHHHHH----HcCceEEc---c--CCceEEEEEe
Confidence 56776664310 0122345666666 89987321 1 2244577766
No 43
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.95 E-value=2.5e-25 Score=235.07 Aligned_cols=350 Identities=14% Similarity=0.077 Sum_probs=235.8
Q ss_pred CCHHHHHHHHHHhhccCCC---CCccccccccCCChHHHHHHHHHHc---CcCCCCC-ccChhhHHHHHHHHHHHHHhhC
Q 014163 37 MPKEAAYQVINDELMLDGN---PRLNLASFVTTWMEPECDKLVMASI---NKNYVDM-DEYPVTTELQNRCVNMIAHLFN 109 (429)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~le~~~~~~la~l~g 109 (429)
.++.++++++.+...++-. ..+.+++ |+....|.+.+.+..-- +-.++.+ +.+++..+++.++.+|+++++|
T Consensus 478 ~sE~e~~r~~~~l~~kn~~~~~~~i~lGs-ct~~~~p~~~~~~~~~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l~eltG 556 (954)
T PRK05367 478 HSETEMMRYLRRLEDKDLALDRSMIPLGS-CTMKLNAAAEMIPITWPEFANLHPFAPAEQAAGYRELIDQLEAWLAEITG 556 (954)
T ss_pred CCHHHHHHHHHHHHhcCcCcccceeeCCc-CCCcCCHHHHHHHHhCccccccCCCChHHHHHHHHHHHHHHHHHHHHHHC
Confidence 4888999999887765533 2233544 77666666554443221 1112222 3456789999999999999999
Q ss_pred CCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccc
Q 014163 110 TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYV 189 (429)
Q Consensus 110 ~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~ 189 (429)
++. .....+||++|++.++++++..... .|. ..+.+|++|+.+|.+....+..+|++++.||++++ +.
T Consensus 557 ~d~------~sl~~~~ga~ge~agL~a~r~~~~~----~G~-~~r~~vlis~~aH~snp~sa~~~G~~vv~v~~d~~-G~ 624 (954)
T PRK05367 557 YDA------VSLQPNAGAQGEYAGLLAIRAYHES----RGE-GHRDVCLIPSSAHGTNPASAVMAGMKVVVVACDEN-GN 624 (954)
T ss_pred CCC------EEECccHHHHHHHHHHHHHHHHhhc----cCC-CCCCEEEEEchhhhhhHHHHHHCCCEEEEECCCCC-CC
Confidence 974 1334557888888888776642211 121 12357999999999999999999999999999865 79
Q ss_pred cCHHHHHHHhhh---CCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCC
Q 014163 190 MNPVKAVELVDE---NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLP 266 (429)
Q Consensus 190 ~d~~~l~~~i~~---~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 266 (429)
+|+++|++++++ ++.+|++++|++..+..+|+++|+++||++ |+|+|||+|+..+...+..+ +..
T Consensus 625 iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~------G~~v~VDgA~~~al~~l~~p------g~~ 692 (954)
T PRK05367 625 IDLDDLRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEH------GGQVYLDGANMNAQVGLARP------GDI 692 (954)
T ss_pred cCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHc------CCEEEEECcChhhccCCCCh------hhc
Confidence 999999999976 467888999988844458999999999999 99999999997543332211 224
Q ss_pred CeeEEEEcCcccCCCCCC-----eEEEEEeCCCCcccccccccCCCCC--CCC-CceeccCCc---hhHHHHHHHHHHHc
Q 014163 267 LVKSINVSGHKYGLVYAG-----VGWVVWRTKDDLPDELVFHINYLGS--DQP-TFTLNFSKG---SSQIIAQYYQFIRL 335 (429)
Q Consensus 267 ~~d~~~~s~hK~~~~p~g-----~g~l~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~tr~---~~~~~~~~~al~~l 335 (429)
++|++++++|||++.|.| +|.+++++ .+...+ +..... ... ..+...+.+ +......|+.+..+
T Consensus 693 GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~--~l~p~l---pg~~v~~~~~~~~~g~v~ta~~g~al~~~~a~~yi~~~ 767 (954)
T PRK05367 693 GADVSHLNLHKTFCIPHGGGGPGVGPIGVKA--HLAPFL---PGHPVQIAGGETGIGAVSAAPFGSASILPISWMYIRMM 767 (954)
T ss_pred CCCEEEecCcccCCCCcCCCCCceEEEeecc--cccccC---CCCccCcCCCCCCcCcchhHHHHHHHHHHHHHHHHHHH
Confidence 799999999999877665 56888864 222211 111100 000 001111121 12445578888999
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeC--C-CCceEEEEEecCC---CCCCHHHHHHHHHHHHhccCceeccc
Q 014163 336 GFEGYKNIMENCMGNARALREGLEKTGRFEILSK--D-VGVPLVAFSLKDS---SAHTVFEISEGLRKKLNRFQVVYPQK 409 (429)
Q Consensus 336 ~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~-~~~~~v~f~~~~~---~~~~~~~~~~~L~~~l~~~G~~~~~~ 409 (429)
|.+|+++..++...+++|+.++|++. +++... . ...+-++|++.+. .+.+..++.++|. +.|+...+.
T Consensus 768 G~~Glr~~a~~~~~~A~Yl~~~L~~~--~~~~~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL~----d~G~~~~t~ 841 (954)
T PRK05367 768 GAEGLRQATEVAILNANYIAKRLKDH--YPVLYTGANGRVAHECILDLRPLKESTGITVDDIAKRLI----DYGFHAPTM 841 (954)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhh--cCccccCCCCCcccceEEEeecccccCCCCHHHHHHHHH----HCCCeEeec
Confidence 99999999999999999999999875 343322 1 1344556665421 1356677777777 999987653
Q ss_pred CCCCCCCceEEEEEec
Q 014163 410 LPMSYPWSTKLRVISH 425 (429)
Q Consensus 410 ~~~~~~~~~~lRi~~~ 425 (429)
+ ++....+||+.+
T Consensus 842 -~--~pv~~~l~i~pt 854 (954)
T PRK05367 842 -S--FPVAGTLMVEPT 854 (954)
T ss_pred -C--CccCCEEEEEee
Confidence 1 222344666653
No 44
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.95 E-value=1e-25 Score=219.80 Aligned_cols=340 Identities=15% Similarity=0.098 Sum_probs=225.5
Q ss_pred hcCCCCCCCCCCCCHHHHHHHHHHhhccCCCCCc-cccccccCCChHHHHHHHHH-HcCc--------CCC--CC--ccC
Q 014163 25 AAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRL-NLASFVTTWMEPECDKLVMA-SINK--------NYV--DM--DEY 90 (429)
Q Consensus 25 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~--------~~~--~~--~~~ 90 (429)
..+....+|+.|.+.+.+...+.+...++.+... +.+.+.-.. .....++.+ .++- +.. ++ ..+
T Consensus 23 ~~~~~~~~p~~g~~~~~i~~~l~~l~~~~~~~~~~~~~~gere~--rv~~~~~~~~~~~~~hgigr~~~l~~~q~ka~gs 100 (444)
T TIGR03531 23 RLLEQRKIPEEGWDDETIELFLHELSVMDTNNFPNNVGVGEREG--RVFSKLVARRHYRFCHGIGRSGDLVAPQPKAAGS 100 (444)
T ss_pred HHHHcCcCCccCCCHHHHHHHHHHHhcCCcCCCccccCcCcccc--eeechhhhhcccceecCCCCcccccccCccccCc
Confidence 4455558999999999998888876554322111 111111110 001111111 1110 000 11 123
Q ss_pred hhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCch-HHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHH
Q 014163 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS-EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (429)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t-~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~ 169 (429)
+....+.+++..++++++|.+.. ....+++|+| .++.+++.+++.+. ..+++|+++..+|.+..+
T Consensus 101 s~~~~l~~~~e~~~~~~~G~~~~----~~a~~v~~~Tg~al~laL~alr~~~----------~~gd~VI~p~~th~S~~k 166 (444)
T TIGR03531 101 SLLYKLTNKLVKDFLKLLGLRSI----KSAFVVPLATGMSLSLCLSALRHKR----------PKAKYVIWPRIDQKSCIK 166 (444)
T ss_pred cHHHHHHHHHHHHHHHHcCCCCC----CEEEEECCHHHHHHHHHHHHcCCcC----------CCCCEEEEECcChHHHHH
Confidence 45678888999999999999731 1278889999 68888887765310 013589999999999999
Q ss_pred HHHhcCceeEEEec--cCCccccCHHHHHHHhhh---CCeEEEEeeCC-CccccccChHHHHHHHHHhhhccCCCccEEe
Q 014163 170 FARYFEVELKEVKL--EEGYYVMNPVKAVELVDE---NTICVAAILGS-TLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (429)
Q Consensus 170 ~~~~~G~~v~~v~~--~~~~~~~d~~~l~~~i~~---~~~~v~~~~~~-~~tG~~~~l~~I~~la~~~~~~~~~~~~l~v 243 (429)
++.+.|++++.|++ +++++.+|+++|+++|++ ++++++++.++ +..|..+|+++|+++|++| ++|+|+
T Consensus 167 Ai~~~G~~pv~Vd~~~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~------gI~lIv 240 (444)
T TIGR03531 167 AISTAGFEPRVIETVLDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANY------DIPHIV 240 (444)
T ss_pred HHHHcCCeEEEeeeeecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHc------CCEEEE
Confidence 99999999999995 555699999999999987 34555555554 3456899999999999999 999999
Q ss_pred ecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchh
Q 014163 244 DAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSS 323 (429)
Q Consensus 244 D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~ 323 (429)
|+||+.+.. +.....+..+....+|++++++||++++|.+.|++++++++.. +.+ ...|.+ .....
T Consensus 241 DaAyg~~~~-~~~~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~-~~i--~~~y~g----------~~~~s 306 (444)
T TIGR03531 241 NNAYGLQSN-KYMELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFI-QEI--SKSYPG----------RASAS 306 (444)
T ss_pred ECcCcCcCh-hhhhhhhccccccCCCeEEEeCccCCCCCCCEEEEEECCHHHH-HHH--HHhccC----------CCCCh
Confidence 999986432 1111111111223589999999999999888787777776543 222 122322 11224
Q ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCC---CeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHh
Q 014163 324 QIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTG---RFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLN 400 (429)
Q Consensus 324 ~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~ 400 (429)
..+.+|+++..+|.+++++++++..++++++.+.|+++. +.+++..+...--+++.+..-.+.+...+..+|.
T Consensus 307 ~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~~~~~~~~g~~l~---- 382 (444)
T TIGR03531 307 PSLDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLKGKDPTMLGSMLY---- 382 (444)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEecccccccCHHHHHHHHH----
Confidence 567789999999999999999999999999999998763 3466644311112333332211346778888888
Q ss_pred ccCc
Q 014163 401 RFQV 404 (429)
Q Consensus 401 ~~G~ 404 (429)
.+++
T Consensus 383 ~~~v 386 (444)
T TIGR03531 383 SRRV 386 (444)
T ss_pred hCCC
Confidence 6665
No 45
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.95 E-value=2.9e-25 Score=219.22 Aligned_cols=310 Identities=12% Similarity=0.021 Sum_probs=212.9
Q ss_pred CChHHHHHHHHHHcCc---CCC-CCcc-ChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINK---NYV-DMDE-YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKW 141 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~---~~~-~~~~-~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~ 141 (429)
+.++.+.+++..+++. +.. .+.. ......+.+++.+ + +++|++++ ..++|+|+|+++..++.++..+
T Consensus 38 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~l~g~~~~-----~v~~~~~~t~~l~~~~~~~~~~- 109 (406)
T TIGR01814 38 LMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLK-L-RLVGAKED-----EVVVMNTLTINLHLLLASFYKP- 109 (406)
T ss_pred cCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhcc-c-cccCCCCC-----cEEEeCCchHHHHHHHHHhcCC-
Confidence 3445567776655532 111 1111 1222334434433 4 89998753 3899999999999888775321
Q ss_pred HHHHHhcCCCCCCcEEEEcCCCchH----HHHHHHhcCcee----EEEeccCCccccCHHHHHHHhh---hCCeEEEEee
Q 014163 142 QQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYFEVEL----KEVKLEEGYYVMNPVKAVELVD---ENTICVAAIL 210 (429)
Q Consensus 142 ~~~~~~~g~~~~~~~vi~~~~~h~s----~~~~~~~~G~~v----~~v~~~~~~~~~d~~~l~~~i~---~~~~~v~~~~ 210 (429)
| .++.+|+++..+|.+ +...++..|+++ +.++.+++ +.+|++++++.++ ++|++|++++
T Consensus 110 -------~--~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~-g~~~~~~l~~~~~~~~~~t~lv~~~~ 179 (406)
T TIGR01814 110 -------T--PKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREE-ETLRLEDILDTIEKNGDDIAVILLSG 179 (406)
T ss_pred -------c--CCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCC-CccCHHHHHHHHHhcCCCeEEEEEec
Confidence 1 012378888899987 344556779887 45665543 6789999999885 6789999999
Q ss_pred CCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEE
Q 014163 211 GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVW 290 (429)
Q Consensus 211 ~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~ 290 (429)
+++.+|.+.|+++|+++|+++ |++++||++|+.+..+ .++...++|++++++|||+++|+| |.+++
T Consensus 180 v~~~tG~~~~~~~i~~~~~~~------g~~~~vD~aq~~G~~~-------id~~~~gvD~~~~s~hK~l~g~pG-~~l~v 245 (406)
T TIGR01814 180 VQYYTGQLFDMAAITRAAHAK------GALVGFDLAHAVGNVP-------LDLHDWGVDFACWCTYKYLNAGPG-AGAFV 245 (406)
T ss_pred cccccceecCHHHHHHHHHHc------CCEEEEEcccccCCcc-------cccccCCCCEEEEcCccccCCCCC-eEEEE
Confidence 999999999999999999999 9999999999876543 233334799999999999987778 55565
Q ss_pred eCCCCcccccccccCCCCCC--------------CCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH
Q 014163 291 RTKDDLPDELVFHINYLGSD--------------QPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALRE 356 (429)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~ 356 (429)
+.+... ........|.... ...+ -.||++...++++.++++.+...|++++.++..++++++++
T Consensus 246 ~~~~~~-~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~l~~ 323 (406)
T TIGR01814 246 HEKHAH-TERPRLAGWWGHARPTRFKMDNTLGLIPCGF-RISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDYLEE 323 (406)
T ss_pred ehhhhh-hcCCCCCcccCCCCccccccccccCCCccce-eeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 443221 1101111111110 0011 13788877888888899988888899999999999999999
Q ss_pred HHHhC----CCeEEeeCCC---CceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEe
Q 014163 357 GLEKT----GRFEILSKDV---GVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVIS 424 (429)
Q Consensus 357 ~L~~~----~~~~~~~~~~---~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~ 424 (429)
.|++. ++++++.+.. +.++++|.++ .+..++.+.|. ++|+.+.. .....+|+|+
T Consensus 324 ~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~----~~~~~~~~~L~----~~gi~v~~------~~~~~iRiS~ 384 (406)
T TIGR01814 324 LIKARCGGPPVLTIITPRDHAQRGCQLSLTHP----VPGKAVFQALI----KRGVIGDK------REPSVIRVAP 384 (406)
T ss_pred HHHhhcCCCCceEEeCCCChhhcCCeEEEEec----CCHHHHHHHHH----HCCEEEec------cCCCeEEEec
Confidence 99885 3588887532 3568888874 24566777776 88988642 1224799997
No 46
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.95 E-value=9.1e-26 Score=211.98 Aligned_cols=276 Identities=17% Similarity=0.093 Sum_probs=200.1
Q ss_pred ccccccCCChHHHHHHHHHHcCcCCCCCc----cChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHH
Q 014163 60 LASFVTTWMEPECDKLVMASINKNYVDMD----EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (429)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~ 135 (429)
+-.+.+++.+|.+.+++..++...++++. .+..-..+| +.++.+|+++|+++. .++||+|+||||++++.
T Consensus 47 ld~~at~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E-~aR~~VAklInAd~~-----dIiFts~ATEs~Nlvl~ 120 (428)
T KOG1549|consen 47 LDNQATGPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVE-AAREQVAKLINADPS-----DIVFTSGATESNNLVLK 120 (428)
T ss_pred EecCcCCCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHH-HHHHHHHHHhCCCCC-----cEEEeCCchHHHHHHHH
Confidence 45555666778888888777765333322 222333344 889999999999874 39999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHh---cCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCC
Q 014163 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARY---FEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGS 212 (429)
Q Consensus 136 a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~---~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~ 212 (429)
.....+. . ..+..||....+|.+....++. .|++++++|++. ++..|++.+++.|+++|++|.+.+.+
T Consensus 121 ~v~~~~~-------~-~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~-~~~~d~~~~~~~i~~~T~lv~I~~Vn 191 (428)
T KOG1549|consen 121 GVARFFG-------D-KTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVED-SGLVDISKLREAIRSKTRLVSIMHVN 191 (428)
T ss_pred Hhhcccc-------c-cccceEEEecccCcchhHHHHHHHhcCeEEEEeccCc-cccccHHHHHHhcCCCceEEEEEecc
Confidence 8755321 1 1122899999999987666554 599999999984 48999999999999999999999999
Q ss_pred CccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeC
Q 014163 213 TLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (429)
Q Consensus 213 ~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~ 292 (429)
|.+|.+.|+++|.++|+++ ++.+|+|+||+-+-. +.|+...++|++++++|||+++|. +|++++|.
T Consensus 192 n~~gv~~Pv~EI~~icr~~------~v~v~~DaAQavG~i-------~vDV~eln~D~~s~s~HK~ygp~~-iGaLYvr~ 257 (428)
T KOG1549|consen 192 NEIGVLQPVKEIVKICREE------GVQVHVDAAQAVGKI-------PVDVQELNADFLSISAHKIYGPPG-IGALYVRR 257 (428)
T ss_pred cCccccccHHHHHHHhCcC------CcEEEeehhhhcCCc-------cccHHHcCchheeeecccccCCCc-ceEEEEcc
Confidence 9999999999999999999 999999999986543 445555679999999999886555 99999986
Q ss_pred CCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHH--HHHHHHHHHHHHHHHHHHHHH-hCCCeEEeeC
Q 014163 293 KDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFE--GYKNIMENCMGNARALREGLE-KTGRFEILSK 369 (429)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~--g~~~~~~~~~~~~~~l~~~L~-~~~~~~~~~~ 369 (429)
.. ..+...+.+.++....-.-.||+....++.+-.+.+....+ +.+.+.. ++...+...+. ..+...+.+.
T Consensus 258 ~~---~~~~~~p~~~GGgq~r~~rsGT~~~~~~~~~gsA~e~~~~~~~~~~~~~~---~~~~~ll~~i~~~~~~~~~~G~ 331 (428)
T KOG1549|consen 258 KR---PRLRVEPPLSGGGQERGLRSGTVATPLAVGLGSAAEFVNKEMAYDEAIIK---RLSEKLLMGIGQSLPEVTLNGS 331 (428)
T ss_pred CC---CcccccCcccCCccccccccCCcCchhhhhhHHHHHHHHhhcchhHHHHH---HHHHHHHHHHhhhCchhhccCC
Confidence 21 22334567777665433334777766666666677665432 2333333 34555555554 3555556555
Q ss_pred C
Q 014163 370 D 370 (429)
Q Consensus 370 ~ 370 (429)
+
T Consensus 332 ~ 332 (428)
T KOG1549|consen 332 G 332 (428)
T ss_pred c
Confidence 4
No 47
>PRK14012 cysteine desulfurase; Provisional
Probab=99.95 E-value=8.3e-25 Score=215.92 Aligned_cols=268 Identities=17% Similarity=0.134 Sum_probs=193.0
Q ss_pred CChHHHHHHHHHHcC--cCCCCCcc-C---h-hhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASIN--KNYVDMDE-Y---P-VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~--~~~~~~~~-~---~-~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~ 139 (429)
++++.+.+++..++. ..+.++.. . . ...+..+++++++++++|.+.+ .+++++|+|+|+.+++.++..
T Consensus 14 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~g~~~~-----~v~~~~g~t~al~~~l~~l~~ 88 (404)
T PRK14012 14 PVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLIGADPR-----EIVFTSGATESDNLAIKGAAH 88 (404)
T ss_pred CCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHcCcCcC-----eEEEeCCHHHHHHHHHHHHHH
Confidence 455667888777664 33332211 0 1 1124455778899999998753 388999999999999887753
Q ss_pred HHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHH---hcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccc
Q 014163 140 KWQQKRKEQGKPYDKPNIVTGANVQVCWEKFAR---YFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (429)
Q Consensus 140 ~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~---~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG 216 (429)
.+.+ .+++|++++.+|+++...++ ..|++++.++++++ +.+|+++|+++|++++++|++++++|+||
T Consensus 89 ~~~~---------~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~~-g~~d~~~l~~~i~~~t~lv~~~~~~n~tG 158 (404)
T PRK14012 89 FYQK---------KGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQSN-GIIDLEKLEAAMRDDTILVSIMHVNNEIG 158 (404)
T ss_pred hhcC---------CCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCCC-CcCCHHHHHHhcCCCCEEEEEECcCCCcc
Confidence 2110 23689999999988755544 35999999998864 88999999999999999999999999999
Q ss_pred cccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCc
Q 014163 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDL 296 (429)
Q Consensus 217 ~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~ 296 (429)
.+.|+++|.++|+++ |+++|+|+|++.+..+ .++...++|++++++||+ ++|.|+|+++++++...
T Consensus 159 ~~~~~~~I~~la~~~------g~~vivD~a~~~g~~~-------~~~~~~~~D~~~~s~~K~-~gp~g~G~l~~~~~~~~ 224 (404)
T PRK14012 159 VIQDIAAIGEICRER------GIIFHVDAAQSVGKVP-------IDLSKLKVDLMSFSAHKI-YGPKGIGALYVRRKPRV 224 (404)
T ss_pred chhhHHHHHHHHHHc------CCEEEEEcchhcCCcc-------cCcccCCCCEEEEehhhc-cCCCceEEEEEecCCCC
Confidence 999999999999999 9999999999865432 122223699999999995 56789999999865322
Q ss_pred ccccccccCCCCCCC-CCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeC
Q 014163 297 PDELVFHINYLGSDQ-PTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSK 369 (429)
Q Consensus 297 ~~~~~~~~~~~~~~~-~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 369 (429)
. ..+.+.++.. ..+. .||.+....+++.+++..+. .++.+..++..++++++.+.|++++++.+..+
T Consensus 225 -~---~~~~~~g~~~~~~~~-~gt~~~~~~~~l~~al~~~~-~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~ 292 (404)
T PRK14012 225 -R---LEAQMHGGGHERGMR-SGTLPTHQIVGMGEAARIAK-EEMATENERIRALRDRLWNGIKDIEEVYLNGD 292 (404)
T ss_pred -C---CCceecCCCccCCcc-CCCcCHHHHHHHHHHHHHHH-hhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCC
Confidence 1 1111222211 1111 25665555666666665543 35677788999999999999999988887643
No 48
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.94 E-value=8.6e-25 Score=212.68 Aligned_cols=310 Identities=14% Similarity=0.078 Sum_probs=206.5
Q ss_pred CChHHHHHHHHHHcCcCCCCCc-----cChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMD-----EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKW 141 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~ 141 (429)
+..|.+.+++..+... +++.. .........+++++.+++++|++. ..+|+|+++++..++.++..
T Consensus 12 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~-------i~~~~g~t~al~~~l~~~~~-- 81 (361)
T cd06452 12 RLTPEARKALIEWGDG-YSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGMDE-------ARVTPGAREGKFAVMHSLCE-- 81 (361)
T ss_pred CCCHHHHHHHHHHhcc-cCCccccccccccccCchHHHHHHHHHHHcCCce-------EEEeCCHHHHHHHHHHHhcC--
Confidence 4457777777766632 12111 111111223356667999999843 88999999999988887643
Q ss_pred HHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCC-ccccCHHHHHHHhhh-------CCeEEEEeeCCC
Q 014163 142 QQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG-YYVMNPVKAVELVDE-------NTICVAAILGST 213 (429)
Q Consensus 142 ~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~-~~~~d~~~l~~~i~~-------~~~~v~~~~~~~ 213 (429)
.+++|+++.++|++...+++..|++++.++++++ ++.+|+++|++++++ ++++|++++++|
T Consensus 82 -----------~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n 150 (361)
T cd06452 82 -----------KGDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDG 150 (361)
T ss_pred -----------CCCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCC
Confidence 2368999999999988889999999999999754 358999999999873 688999999999
Q ss_pred ccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCC
Q 014163 214 LTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (429)
Q Consensus 214 ~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~ 293 (429)
++|.+.|+++|+++|+++ ++++|+|+||+.+..++ +....++|+++.++||++++|.++|+++.++
T Consensus 151 ~tG~~~~~~~i~~~~~~~------~~~vivD~a~~~g~~~~-------~~~~~~~d~~~~s~~K~l~~~~~~G~l~~~~- 216 (361)
T cd06452 151 NYGNLHDAKKIAKVCHEY------GVPLLLNGAYTVGRMPV-------SGKELGADFIVGSGHKSMAASAPIGVLATTE- 216 (361)
T ss_pred CCeeeccHHHHHHHHHHc------CCeEEEECCcccCCcCC-------CHHHcCCCEEEecCCccccCCCCeEEEEECH-
Confidence 999999999999999999 99999999998543222 1111258999999999998888999988754
Q ss_pred CCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCC-CC
Q 014163 294 DDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKD-VG 372 (429)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~ 372 (429)
+.. +.+.....+....... .+.++........+++++..+ .+. .+..++..++++++.+.|+++++++++.+. ..
T Consensus 217 ~~~-~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~al~~~-~~~-~~~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~ 292 (361)
T cd06452 217 EWA-DIVFRTSQMFKIKEVE-LLGCTLRGAPLVTLMASFPHV-KER-VKRWDEEVEKARWFVAELEKIEGIKQLGEKPKN 292 (361)
T ss_pred HHH-HHHhccccccccceee-eeccccCchHHHHHHHHHHHH-HHH-HHHHHHHHHHHHHHHHHHhcCCCeEEECCCCCC
Confidence 222 2221111111111100 011233223455555666543 222 234455566779999999999779887432 25
Q ss_pred ceEEEEEecCC------CCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEe
Q 014163 373 VPLVAFSLKDS------SAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVIS 424 (429)
Q Consensus 373 ~~~v~f~~~~~------~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~ 424 (429)
.+++.|+.... ......++.+.|. ++||.+.. ... ..++|+++
T Consensus 293 ~n~~~~~~~~~~~~~~~~~~~~~~~~~~L~----~~gI~~~~---~~~--~~~~ri~~ 341 (361)
T cd06452 293 HDLMFFETPSFDEIAKKHKRRGYFLYSELK----KRGIHGIK---PGL--TRYFKLST 341 (361)
T ss_pred CceEEEEcCCcchhhhhccccchhHHHHHH----HcCceEEc---CCC--ceEEEEEe
Confidence 67777775310 0111234666666 89998531 122 23689988
No 49
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.94 E-value=2.7e-24 Score=213.06 Aligned_cols=334 Identities=15% Similarity=0.098 Sum_probs=227.3
Q ss_pred CCCCccccccccC----C-ChHHHHHHHHHHcCcCC-CCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCch
Q 014163 54 GNPRLNLASFVTT----W-MEPECDKLVMASINKNY-VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS 127 (429)
Q Consensus 54 ~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t 127 (429)
+.+.++|+.+.|+ + +++.+.+++..++..+. ..|....+..++++.+.+++.+.+|.+.+. ..+++|+|++
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~---~~v~it~G~~ 127 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELST---DDIYLTAGCA 127 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCCh---hhEEEeCCHH
Confidence 5677788888774 3 34568888888776543 245556688899999888887766765432 2388999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEecc-CCccccCHHHHHHHhhhCCeEE
Q 014163 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVMNPVKAVELVDENTICV 206 (429)
Q Consensus 128 ~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~-~~~~~~d~~~l~~~i~~~~~~v 206 (429)
+|+.+++.++.+ .+++|+++.++|+.+...+...|++++.+++. +++|.+|+++|+++++++++++
T Consensus 128 ~al~l~~~~l~~-------------~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i 194 (430)
T PLN00145 128 QAIEIIMSVLAQ-------------PGANILLPRPGYPLYEARAVFSGLEVRHFDLLPERGWEVDLEGVEALADENTVAM 194 (430)
T ss_pred HHHHHHHHHhcC-------------CCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCcCceEE
Confidence 999998888754 23689999999999999999999999999874 3458999999999999999999
Q ss_pred EEeeCCCccccccC---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCC-Ccc-cc-CCCCeeEEEEcCcccCC
Q 014163 207 AAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD-LEW-DF-RLPLVKSINVSGHKYGL 280 (429)
Q Consensus 207 ~~~~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~-~~~-~~-~~~~~d~~~~s~hK~~~ 280 (429)
++++|+||||.+.+ +++|+++|+++ ++++++|++|+.+.. .... ... .+ ....+-++...++.|++
T Consensus 195 ~i~~P~NPtG~v~~~~~l~~i~~~a~~~------~i~ii~De~Y~~~~~--~~~~~~~~~~~~~~~~vi~~~S~SK~~~~ 266 (430)
T PLN00145 195 VIINPNNPCGSVYSYEHLAKIAETARKL------GILVIADEVYDHLTF--GSKPFVPMGVFGEVAPVLTLGSISKRWVV 266 (430)
T ss_pred EEeCCCCCCCCCCCHHHHHHHHHHHHHc------CCEEEEeccchhhcc--CCCCccchhhhcccCcEEEEeccccccCC
Confidence 99999999999976 78889999999 999999999987431 1111 110 11 12245555555666799
Q ss_pred CCCCeEEEEEeCCCCccccc---ccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHH
Q 014163 281 VYAGVGWVVWRTKDDLPDEL---VFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG---FEGYKNIMENCMGNARAL 354 (429)
Q Consensus 281 ~p~g~g~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~---~~g~~~~~~~~~~~~~~l 354 (429)
+++++||++..++..+.... .....+.... .. ...+.|.++...+. .+.+++..+..+++++.+
T Consensus 267 pG~RlG~iv~~~~~~~~~~~~~~~~~~~~~~~~-------~~---~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~ 336 (430)
T PLN00145 267 PGWRLGWIATCDPNGILKETKVVDSIRNYLNIS-------TD---PATFVQGAIPQIIANTKEEFFTKTLGLLKETADIC 336 (430)
T ss_pred CCeeEEEEEEecchhhhhhhHHHHHHHHHhccc-------CC---CCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 99999999875443221110 0000111000 01 12223444444442 355788888999999999
Q ss_pred HHHHHhCCCeEEeeCCCCceEEEEEecCC--CC-CCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEecc
Q 014163 355 REGLEKTGRFEILSKDVGVPLVAFSLKDS--SA-HTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHL 426 (429)
Q Consensus 355 ~~~L~~~~~~~~~~~~~~~~~v~f~~~~~--~~-~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~ 426 (429)
.+.|++++++.....|.....+.++++.. .+ .+..++...|.+ ++|+.+.+.... ....++|||++.
T Consensus 337 ~~~L~~~~g~~~~~~P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~---~~gV~v~pG~~f--g~~~~lRis~~~ 406 (430)
T PLN00145 337 YEKIKEIKCITCPHKPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAK---EESVVVLPGSAL--GMKNWLRITFAI 406 (430)
T ss_pred HHHHhcCCCCCCCcCCCeeeEEEeccChhhcCCCCCHHHHHHHHHH---hCCEEEeCcccc--CCCCeEEEEeCC
Confidence 99999987776543343444445555321 11 244556655442 678888765221 234689999974
No 50
>PLN00175 aminotransferase family protein; Provisional
Probab=99.94 E-value=1.8e-24 Score=213.46 Aligned_cols=329 Identities=13% Similarity=0.062 Sum_probs=225.9
Q ss_pred CCCccccccccCCC-hHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHH
Q 014163 55 NPRLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLA 133 (429)
Q Consensus 55 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~a 133 (429)
++.++|+.+.|+++ ++.+.+++.+++..+...|....+..+|++.+.+++.+.+|.+.+.. ..+.+|+|+++|+.++
T Consensus 54 ~~~i~l~~G~P~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~--~~I~vt~G~~~al~~~ 131 (413)
T PLN00175 54 HGAINLGQGFPNFDGPDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDPE--KEVTVTSGCTEAIAAT 131 (413)
T ss_pred CCeEecCCCCCCCCCCHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCC--CCEEEeCCHHHHHHHH
Confidence 45577888888765 45578888877765444566677889999999999998888764321 1378899999999888
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCC
Q 014163 134 GLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGST 213 (429)
Q Consensus 134 l~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~ 213 (429)
+.++.+ .+++|+++++.|..+...++..|++++.++++++++.+|+++|++.+.+++++|++++++|
T Consensus 132 ~~~l~~-------------~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~l~~~~~~~~k~i~i~~p~N 198 (413)
T PLN00175 132 ILGLIN-------------PGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPPDFAVPEDELKAAFTSKTRAILINTPHN 198 (413)
T ss_pred HHHhCC-------------CCCEEEEeCCCchhHHHHHHHcCCEEEEEECCcccCCCCHHHHHHhcCcCceEEEecCCCC
Confidence 887654 2368999999999999999999999999999754488999999999998999999999999
Q ss_pred cccccc---ChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCc-ccc-CCCCeeEEEEcCcccC-CCCCCeEE
Q 014163 214 LTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDF-RLPLVKSINVSGHKYG-LVYAGVGW 287 (429)
Q Consensus 214 ~tG~~~---~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~-~~~~~d~~~~s~hK~~-~~p~g~g~ 287 (429)
|||.+. ++++|+++|++| ++|+++|++|..+.. ...... ..+ +...-..+..|.-|.+ ++++++||
T Consensus 199 PtG~~~s~~~l~~l~~~a~~~------~~~ii~De~Y~~l~~--~~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~ 270 (413)
T PLN00175 199 PTGKMFTREELELIASLCKEN------DVLAFTDEVYDKLAF--EGDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGW 270 (413)
T ss_pred CCCcCCCHHHHHHHHHHHHHc------CcEEEEecccCcccc--CCcccChhhCCCCcCcEEEEecchhhccCcchheee
Confidence 999985 578899999999 999999999987432 111000 111 1111234444556655 58899999
Q ss_pred EEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHc--CHHHHHHHHHHHHHHHHHHHHHHHhCCCeE
Q 014163 288 VVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEGYKNIMENCMGNARALREGLEKTGRFE 365 (429)
Q Consensus 288 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l--~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~ 365 (429)
++... + +...+.....+... + .....++++...+ +...+++..++..++++++.+.|++.+ +.
T Consensus 271 ~v~~~-~-l~~~l~~~~~~~~~---------~---~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~ 335 (413)
T PLN00175 271 AIAPP-H-LTWGVRQAHSFLTF---------A---TATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEVG-FK 335 (413)
T ss_pred eEeCH-H-HHHHHHHHHhhccC---------C---CCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCC-Ce
Confidence 88643 2 22222111111111 1 1222345555444 234467778888899999999999985 77
Q ss_pred EeeCCCCceEE-EEEecCCCCC-CHHHHHHHHHHHHhccCceeccc--CCC-CCCCceEEEEEeccc
Q 014163 366 ILSKDVGVPLV-AFSLKDSSAH-TVFEISEGLRKKLNRFQVVYPQK--LPM-SYPWSTKLRVISHLR 427 (429)
Q Consensus 366 ~~~~~~~~~~v-~f~~~~~~~~-~~~~~~~~L~~~l~~~G~~~~~~--~~~-~~~~~~~lRi~~~~~ 427 (429)
+..+ ..+++ .+++.+. +. +..++.+.|.+ ++|+.+.+. +.. ...+..++|+|++.+
T Consensus 336 ~~~p--~g~~f~~~~~~~~-~~~~~~~~~~~ll~---~~gV~v~pg~~F~~~~~~~~~~iRls~~~~ 396 (413)
T PLN00175 336 VYPS--SGTYFVMVDHTPF-GFENDIAFCEYLIE---EVGVAAIPPSVFYLNPEDGKNLVRFAFCKD 396 (413)
T ss_pred ecCC--CeeEEEEEecccc-CCCCHHHHHHHHHH---hCCEEEeCchHhCCCCCCCCCEEEEEEcCC
Confidence 6543 34544 4444321 23 45677777652 569988765 211 112356799999753
No 51
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.94 E-value=1.5e-24 Score=212.74 Aligned_cols=326 Identities=13% Similarity=0.017 Sum_probs=223.9
Q ss_pred CccccccccCCC-hHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHH
Q 014163 57 RLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (429)
Q Consensus 57 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~ 135 (429)
.++|..+.++.+ ++.+.+++...+......|....+..++++.+.+++.+.+|.+.+. ....+|+|+++++.+++.
T Consensus 26 ~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~---~~i~~t~g~~~al~~~~~ 102 (382)
T PRK06108 26 VLPLWFGESDLPTPDFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATPP---ERIAVTSSGVQALMLAAQ 102 (382)
T ss_pred eEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcCc---ceEEEeCChHHHHHHHHH
Confidence 356777777654 5668888887776544446666788999999999999988954322 238899999999998888
Q ss_pred HHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccC--CccccCHHHHHHHhhhCCeEEEEeeCCC
Q 014163 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE--GYYVMNPVKAVELVDENTICVAAILGST 213 (429)
Q Consensus 136 a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~--~~~~~d~~~l~~~i~~~~~~v~~~~~~~ 213 (429)
++.. .++.|+++.++|..+...++..|++++.+|.+. +++.+|+++|++.+++++++|++++++|
T Consensus 103 ~l~~-------------~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~N 169 (382)
T PRK06108 103 ALVG-------------PGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNN 169 (382)
T ss_pred HhcC-------------CCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCC
Confidence 7654 135899999999999999999999999999863 3467999999999988899999999999
Q ss_pred cccccc---ChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCc--ccc-CCCCeeEEEEcCcccC-CCCCCeE
Q 014163 214 LTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE--WDF-RLPLVKSINVSGHKYG-LVYAGVG 286 (429)
Q Consensus 214 ~tG~~~---~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~-~~~~~d~~~~s~hK~~-~~p~g~g 286 (429)
|||.+. ++++|+++|+++ ++++++|++|+.+... ...... .++ ....-..+..+.+|.+ +++.++|
T Consensus 170 PtG~~~~~~~~~~l~~~~~~~------~~~li~De~y~~~~~~-~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG 242 (382)
T PRK06108 170 PTGWTASRDDLRAILAHCRRH------GLWIVADEVYERLYYA-PGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLG 242 (382)
T ss_pred CCCcccCHHHHHHHHHHHHHC------CcEEEEehhhhhhccC-CCCCCCCHhhcCCCcCCEEEEeechhhccCccccee
Confidence 999874 578899999999 9999999999875421 000100 111 1112345566778854 5788999
Q ss_pred EEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHc--CHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 014163 287 WVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEGYKNIMENCMGNARALREGLEKTGRF 364 (429)
Q Consensus 287 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l--~~~g~~~~~~~~~~~~~~l~~~L~~~~~~ 364 (429)
+++.+. + +.+.+.....+... + ...+.+.++...+ +.+.+++..++..++++++.+.|++++++
T Consensus 243 ~~~~~~-~-~~~~~~~~~~~~~~--------~----~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 308 (382)
T PRK06108 243 WLVAPP-A-LGQVLEKLIEYNTS--------C----VAQFVQRAAVAALDEGEDFVAELVARLRRSRDHLVDALRALPGV 308 (382)
T ss_pred eeeCCH-H-HHHHHHHHHHhccc--------C----CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 998743 2 22222111111110 1 1222333333333 34456788888999999999999988777
Q ss_pred EEeeCCCCceEE-EEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEecc
Q 014163 365 EILSKDVGVPLV-AFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHL 426 (429)
Q Consensus 365 ~~~~~~~~~~~v-~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~ 426 (429)
++..+ ..+.+ .+++++ ..+..++.+.|.+ ++|+.+.+.......+..++|+|++.
T Consensus 309 ~~~~p--~~g~~~~~~l~~--~~~~~~~~~~ll~---~~gV~v~pg~~f~~~~~~~~Ris~~~ 364 (382)
T PRK06108 309 EVAKP--DGAMYAFFRIPG--VTDSLALAKRLVD---EAGLGLAPGTAFGPGGEGFLRWCFAR 364 (382)
T ss_pred cccCC--CeeEEEEEeCCC--CCCHHHHHHHHHH---hCCEEEeCchhhCCCCCCEEEEEecC
Confidence 76643 34444 445532 3456677777641 67998876411112335679999975
No 52
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.94 E-value=1.7e-24 Score=212.87 Aligned_cols=327 Identities=13% Similarity=0.115 Sum_probs=226.3
Q ss_pred CccccccccCCC-hHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHH
Q 014163 57 RLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (429)
Q Consensus 57 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~ 135 (429)
.++|..+.|..+ ++.+.+++...+......|...++..++++.+.+++.+.+|...+. ..+++|+|+++|+.+++.
T Consensus 35 ~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~---~~i~~t~G~~~al~~~~~ 111 (391)
T PRK08361 35 VISLGIGEPDFDTPKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVDV---DNVIVTAGAYEATYLAFE 111 (391)
T ss_pred eEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCc---ccEEEeCChHHHHHHHHH
Confidence 456666666653 4557788777776555556666788999999999988877764332 248899999999998888
Q ss_pred HHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCC-ccccCHHHHHHHhhhCCeEEEEeeCCCc
Q 014163 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG-YYVMNPVKAVELVDENTICVAAILGSTL 214 (429)
Q Consensus 136 a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~-~~~~d~~~l~~~i~~~~~~v~~~~~~~~ 214 (429)
++.. .++.|++++++|..+...++..|++++.+|++++ ++.+|++++++.+++++++|++++|+||
T Consensus 112 ~l~~-------------~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~i~~p~NP 178 (391)
T PRK08361 112 SLLE-------------EGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEFQPDPDELLELITKRTRMIVINYPNNP 178 (391)
T ss_pred HhcC-------------CCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCCCCCHHHHHHhcccccEEEEEeCCCCC
Confidence 7754 1368999999999999999999999999999753 4789999999999999999999999999
Q ss_pred cccccC---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccC-CCCeeEEEEcCcccCC-CCCCeEEEE
Q 014163 215 TGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGL-VYAGVGWVV 289 (429)
Q Consensus 215 tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~d~~~~s~hK~~~-~p~g~g~l~ 289 (429)
||.+.+ +++|+++|+++ ++++|+|++|+.+.. .......... ....+.++.+.+|.++ ++.++||++
T Consensus 179 tG~~~~~~~~~~l~~~~~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~ 250 (391)
T PRK08361 179 TGATLDKEVAKAIADIAEDY------NIYILSDEPYEHFLY--EGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVI 250 (391)
T ss_pred CCcCcCHHHHHHHHHHHHHc------CeEEEEEccccccee--CCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhc
Confidence 999988 88999999999 999999999987532 1111100011 1134677788899664 666799988
Q ss_pred EeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCH----HHHHHHHHHHHHHHHHHHHHHHhCCCeE
Q 014163 290 WRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF----EGYKNIMENCMGNARALREGLEKTGRFE 365 (429)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~----~g~~~~~~~~~~~~~~l~~~L~~~~~~~ 365 (429)
+.+ +.. ..+.....+... + ...+.+.++...+.. +.+++..++..++++.+.+.|+++++++
T Consensus 251 ~~~-~~~-~~~~~~~~~~~~---------~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~ 316 (391)
T PRK08361 251 APE-QVI-KDMIKLHAYIIG---------N---VASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIK 316 (391)
T ss_pred cCH-HHH-HHHHHHHhhhcc---------C---CChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCe
Confidence 743 222 221111111111 1 122334444444422 3467777888889999999999987677
Q ss_pred EeeCCCCceEEEE-EecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 366 ILSKDVGVPLVAF-SLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 366 ~~~~~~~~~~v~f-~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
+..+ +.+.++| ++++ .+.+..++.+.|.+ ++|+.+.+.......+..++|++++.+
T Consensus 317 ~~~p--~g~~~~~~~l~~-~~~~~~~l~~~l~~---~~gv~v~pg~~f~~~~~~~iRi~~~~~ 373 (391)
T PRK08361 317 VFEP--KGAFYVFANIDE-TGMSSEDFAEWLLE---KARVVVIPGTAFGKAGEGYIRISYATS 373 (391)
T ss_pred ecCC--CEEEEEEEECCC-CCCCHHHHHHHHHH---hCCEEEcCchhhCCCCCCEEEEEecCC
Confidence 6543 4555544 5532 23567788777651 579998765221223446799998753
No 53
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.94 E-value=3e-24 Score=209.53 Aligned_cols=311 Identities=15% Similarity=0.076 Sum_probs=214.9
Q ss_pred ChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHh
Q 014163 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (429)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~ 147 (429)
+.+.+.+++.. .+.++ .+...+..+++++.+++++|.+.+. ....+|.+||+++..++.++..
T Consensus 16 ~~~~~~~a~~~----~~~~~--~~~~~~~~~~~~~~l~~l~~~~~~~---~~i~~~~~gt~~l~~~~~~l~~-------- 78 (368)
T PRK13479 16 TSRTVREAMLR----DWGSW--DDDFNALTASVRAKLVAIATGEEGY---TCVPLQGSGTFSVEAAIGSLVP-------- 78 (368)
T ss_pred CCHHHHHHhCC----CCCCC--ChHHHHHHHHHHHHHHHHhCCCCCc---eEEEEcCCcHHHHHHHHHhccC--------
Confidence 34555555433 33322 2334456779999999999986421 2266888999999988888753
Q ss_pred cCCCCCCcEEEEcCCCchHH--HHHHHhcCceeEEEeccCCccccCHHHHHHHhhhC--CeEEEEeeCCCccccccChHH
Q 014163 148 QGKPYDKPNIVTGANVQVCW--EKFARYFEVELKEVKLEEGYYVMNPVKAVELVDEN--TICVAAILGSTLTGEFEDVKL 223 (429)
Q Consensus 148 ~g~~~~~~~vi~~~~~h~s~--~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~--~~~v~~~~~~~~tG~~~~l~~ 223 (429)
.++++++....++.. ...++..|++++.+|++++ +.+|+++++++++++ +++|.+++++|+||.+.|+++
T Consensus 79 -----~~~~vlv~~~~~~~~~~~~~~~~~g~~~~~i~~~~~-~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~~~~ 152 (368)
T PRK13479 79 -----RDGKVLVPDNGAYGARIAQIAEYLGIAHVVLDTGED-EPPDAAEVEAALAADPRITHVALVHCETTTGILNPLDE 152 (368)
T ss_pred -----CCCeEEEEeCCchHHHHHHHHHHcCCcEEEEECCCC-CCCCHHHHHHHHHhCCCCcEEEEEcccCccccccCHHH
Confidence 124677666666543 5778889999999999764 679999999999754 467889999999999999999
Q ss_pred HHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCccccccc-
Q 014163 224 LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVF- 302 (429)
Q Consensus 224 I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~- 302 (429)
|.++|+++ ++++++|++++.+.. +.++...++|++++++|||+++|.|+|+++++.+ .+ +.+..
T Consensus 153 i~~l~~~~------~~~livDa~~~~g~~-------~~~~~~~~~d~~v~s~~K~l~g~~G~G~l~~~~~-~~-~~~~~~ 217 (368)
T PRK13479 153 IAAVAKRH------GKRLIVDAMSSFGAI-------PIDIAELGIDALISSANKCIEGVPGFGFVIARRS-EL-EACKGN 217 (368)
T ss_pred HHHHHHHc------CCEEEEEcccccCCc-------cccccccCceEEEecCccccccCCCceEEEECHH-HH-HHhhcC
Confidence 99999999 999999988754322 1233333689999999999999999999998653 22 11111
Q ss_pred ccCCCCCC-------CCCceeccCCchhHHHHHHHHHHHcCHH-HHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC--C
Q 014163 303 HINYLGSD-------QPTFTLNFSKGSSQIIAQYYQFIRLGFE-GYKNIMENCMGNARALREGLEKTGRFEILSKDV--G 372 (429)
Q Consensus 303 ~~~~~~~~-------~~~~~~~~tr~~~~~~~~~~al~~l~~~-g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--~ 372 (429)
...|..+. ........|.+...++++.++++.+..+ +++++.++..++++++.+.|++++ ++++.++. .
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~ 296 (368)
T PRK13479 218 SRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRALG-FEPLLDAEIQS 296 (368)
T ss_pred CCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHcC-CcccCCchhcC
Confidence 11111000 0000111355556677788888877544 578888999999999999999985 77764431 2
Q ss_pred ceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEe
Q 014163 373 VPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVIS 424 (429)
Q Consensus 373 ~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~ 424 (429)
..+++|.++...+.+..++.+.|. ++|+.++.... .....+|+++
T Consensus 297 ~~~~~~~~~~~~~~~~~~l~~~L~----~~gi~v~~g~~---~~~~~iRis~ 341 (368)
T PRK13479 297 PIIVTFHAPADPAYDFKEFYERLK----EQGFVIYPGKL---TQVDTFRIGC 341 (368)
T ss_pred ceEEEEECCCCCCcCHHHHHHHHH----HCCEEEecCCC---CCCCEEEEec
Confidence 245677664332356677777777 89999865311 1234689986
No 54
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.94 E-value=3.7e-24 Score=202.19 Aligned_cols=297 Identities=15% Similarity=0.110 Sum_probs=224.2
Q ss_pred cChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCch--H
Q 014163 89 EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQV--C 166 (429)
Q Consensus 89 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~--s 166 (429)
.+|.+..+.+++++.+..+++.+.. ....++.+||.++..++..+..+ +++|++....-+ -
T Consensus 32 ~s~~F~~~~~~~~~~L~~v~~t~~~----~~~ll~gsGt~amEAav~sl~~p-------------gdkVLv~~nG~FG~R 94 (383)
T COG0075 32 RSPDFVGIMKEVLEKLRKVFGTENG----DVVLLSGSGTLAMEAAVASLVEP-------------GDKVLVVVNGKFGER 94 (383)
T ss_pred CCHHHHHHHHHHHHHHHHHhcCCCC----cEEEEcCCcHHHHHHHHHhccCC-------------CCeEEEEeCChHHHH
Confidence 5778888999999999999999842 23566678888888888877652 256776666555 4
Q ss_pred HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhC--CeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEee
Q 014163 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDEN--TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVD 244 (429)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~--~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD 244 (429)
|...++.+|++++.+..+++ -.+|+++++++|+++ .++|.++|..|+||..+|+++|+++||+| |..++||
T Consensus 95 ~~~ia~~~g~~v~~~~~~wg-~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~------g~l~iVD 167 (383)
T COG0075 95 FAEIAERYGAEVVVLEVEWG-EAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLKEIAKAAKEH------GALLIVD 167 (383)
T ss_pred HHHHHHHhCCceEEEeCCCC-CCCCHHHHHHHHhcCCCccEEEEEeccCcccccCcHHHHHHHHHHc------CCEEEEE
Confidence 88999999999999999876 589999999999954 57899999999999999999999999999 9999999
Q ss_pred cccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccc-cCCCCC-------CCCCcee
Q 014163 245 AASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFH-INYLGS-------DQPTFTL 316 (429)
Q Consensus 245 ~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~-~~~~~~-------~~~~~~~ 316 (429)
++.+.+..++. +...++|++...++|++++|+|.|++.++++.+- ...... +.|..+ .......
T Consensus 168 aVsS~Gg~~~~-------vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~e-~~~~~~~~~~ylDL~~~~~~~~~~~~~ 239 (383)
T COG0075 168 AVSSLGGEPLK-------VDEWGIDVAITGSQKALGAPPGLAFVAVSERALE-AIEERKHPSFYLDLKKWLKYMEKKGST 239 (383)
T ss_pred ecccCCCcccc-------hhhcCccEEEecCchhccCCCccceeEECHHHHH-HHhcCCCCceeecHHHHHHHHhhcCCC
Confidence 99875544332 3334799999999999999999999998765331 111111 112111 0011234
Q ss_pred ccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC--CceEEEEEecCCCCCCHHHHHHH
Q 014163 317 NFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV--GVPLVAFSLKDSSAHTVFEISEG 394 (429)
Q Consensus 317 ~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--~~~~v~f~~~~~~~~~~~~~~~~ 394 (429)
..|++...++++..+++.+..+|+++++++++++++++++.+++++ ++++.++. ...++++..+. +++..++...
T Consensus 240 p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~alG-l~~~~~~~~~s~tvta~~~P~--g~~~~~~~~~ 316 (383)
T COG0075 240 PYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEALG-LELFADPERRSPTVTAIKVPE--GVDDKKVRRA 316 (383)
T ss_pred CCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcC-CccccCcccCCCceEEEECCC--CCCcHHHHHH
Confidence 5788888899999999999999999999999999999999999998 99887432 34577777643 4554445445
Q ss_pred HHHHHhccCceecccCCCCCCCceEEEEEec
Q 014163 395 LRKKLNRFQVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 395 L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
+++ +.|+.+... .....+ .++||..+
T Consensus 317 ~~~---~~g~~i~gg-~~~l~g-kifRIGhM 342 (383)
T COG0075 317 LLK---EYGVEIAGG-QGPLKG-KIFRIGHM 342 (383)
T ss_pred HHH---hCCEEeccc-ccccCc-cEEEEecC
Confidence 551 568876542 222333 46999764
No 55
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.94 E-value=2.7e-24 Score=208.89 Aligned_cols=313 Identities=14% Similarity=0.097 Sum_probs=215.5
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
.+.+.+.+++...++ ++ .+...++.+++++.+++++|++++. ....++.|||+++..++.++..+
T Consensus 9 ~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~la~~~~~~~~~---~~i~~~~~gt~~l~~~~~~~~~~------ 73 (355)
T TIGR03301 9 STSATVRDAMLVDWC----HW--DSEFNDVTDQVRDRLLALAGGDDNH---TCVLLQGSGTFAVEATIGSLVPR------ 73 (355)
T ss_pred CCCHHHHHHhhhhcc----CC--CHHHHHHHHHHHHHHHHHhcCCCCC---cEEEEeCCcHHHHHHHHHhccCC------
Confidence 345667777665322 22 2233466778999999999998631 13668899999999888876531
Q ss_pred hcCCCCCCcEEE-EcCCCchH-HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhC--CeEEEEeeCCCccccccChH
Q 014163 147 EQGKPYDKPNIV-TGANVQVC-WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDEN--TICVAAILGSTLTGEFEDVK 222 (429)
Q Consensus 147 ~~g~~~~~~~vi-~~~~~h~s-~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~--~~~v~~~~~~~~tG~~~~l~ 222 (429)
+++++ +++..|.. +..+++..|++++.++.+++ +.+|+++++++++++ ++++++++++|++|.+.|++
T Consensus 74 -------~~~vi~~~~~~~~~~~~~~a~~~g~~~~~i~~~~~-~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~ 145 (355)
T TIGR03301 74 -------DGKLLVLINGAYGERLAKICEYLGIPHTDLNFSEY-EPPDLNRIEEALAADPDITHVATVHHETTTGILNPLE 145 (355)
T ss_pred -------CCeEEEECCCchhhHHHHHHHHcCCceEEEecCCC-CCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHHH
Confidence 24444 55555544 56788889999999998764 689999999999754 46788899999999999999
Q ss_pred HHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccc-
Q 014163 223 LLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELV- 301 (429)
Q Consensus 223 ~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~- 301 (429)
+|+++|++| ++++++|++++.+..+ .++...++|++..++|||+++|.|+|+++++++ .+ +.+.
T Consensus 146 ~i~~l~~~~------~~~livD~~~s~g~~~-------~~~~~~~~d~~~~s~~K~l~~~~G~g~~~~~~~-~~-~~~~~ 210 (355)
T TIGR03301 146 AIAKVARSH------GAVLIVDAMSSFGAIP-------IDIEELDVDALIASANKCLEGVPGFGFVIARRD-LL-EASAG 210 (355)
T ss_pred HHHHHHHHc------CCEEEEEeccccCCcc-------cchhhcCccEEEecCCcccccCCceeEEEECHH-HH-HHhhC
Confidence 999999999 9999999987643321 233333689999999999989999999988653 22 1111
Q ss_pred cccCCCCCC-------CCCceeccCCchhHHHHHHHHHHHcCHHH-HHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC-C
Q 014163 302 FHINYLGSD-------QPTFTLNFSKGSSQIIAQYYQFIRLGFEG-YKNIMENCMGNARALREGLEKTGRFEILSKDV-G 372 (429)
Q Consensus 302 ~~~~~~~~~-------~~~~~~~~tr~~~~~~~~~~al~~l~~~g-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~ 372 (429)
....+.... .......++.+.....++..+++.+..++ +++..++..++++++.+.|++++ ++++.++. .
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~g-~~~~~~~~~~ 289 (355)
T TIGR03301 211 NARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRALG-FQPLLPERWQ 289 (355)
T ss_pred CCCCceeeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcC-CeeecCCCCC
Confidence 001110000 00001124555556667777888776665 88899999999999999999885 77665432 2
Q ss_pred ce-EEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEec
Q 014163 373 VP-LVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 373 ~~-~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
.+ +++|+++.....+..++.+.|. ++|+.+...... ...++|++++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~l~----~~gi~i~~~~~~---~~~~iRis~~ 336 (355)
T TIGR03301 290 SPIIVSFLYPDDPDFDFDDFYQELK----ERGFVIYPGKLT---LADTFRIGTI 336 (355)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHH----HCCEEEECCccc---cccEEEEecC
Confidence 33 4566664321245567777777 899998754211 1267999975
No 56
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.94 E-value=1.5e-23 Score=220.55 Aligned_cols=348 Identities=11% Similarity=0.026 Sum_probs=240.8
Q ss_pred CCHHHHHHHHHHhhccCC---CCCccccccccCCChHHHHHHHHHH---cCcCCCCC-ccChhhHHHHHHHHHHHHHhhC
Q 014163 37 MPKEAAYQVINDELMLDG---NPRLNLASFVTTWMEPECDKLVMAS---INKNYVDM-DEYPVTTELQNRCVNMIAHLFN 109 (429)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~le~~~~~~la~l~g 109 (429)
.++.+++.++...-..+- +.-+.| +-|+--..|.+.+..... .+-.++.+ +..++..++..++++++++++|
T Consensus 504 ~se~~~~r~~~~l~~~~~~~~~~~~pl-gsctmk~n~~~~~~~~~~~~~~~~hp~~p~~~~~g~~~~~~~~r~~la~i~g 582 (993)
T PLN02414 504 HSEHELLRYLHRLQNKDLSLVHSMIPL-GSCTMKLNATTEMMPVTWPEFANIHPFAPVDQAQGYQEMFEDLGDLLCEITG 582 (993)
T ss_pred cCHHHHHHHHHHHhhcccccccCCccC-cccccccCchhhhhhhcCcchhhcCCCCCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 577888888877655432 222333 224433445444433322 12223322 2345888899999999999999
Q ss_pred CCCCCCCCCCceEeCCch----HHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccC
Q 014163 110 TPVADDKTAVGVGTVGSS----EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE 185 (429)
Q Consensus 110 ~~~~~~~~~~~~~t~g~t----~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~ 185 (429)
++. +.++.+++ +|++++++++... .|.+ .+.+|++|..+|.+....+.+.|++++.||+++
T Consensus 583 ~~~-------v~f~pnaga~ge~a~~~vi~~~~~~-------~Gd~-~r~~vli~~~aH~sn~a~a~~~G~~vv~v~~d~ 647 (993)
T PLN02414 583 FDS-------FSLQPNAGAAGEYAGLMVIRAYHLS-------RGDH-HRNVCIIPVSAHGTNPASAAMCGMKIVVVGTDA 647 (993)
T ss_pred CCe-------EEEcCCCcHHHHHHHHHHHHHHHhc-------cCCC-CCCEEEeCCCcCccCHHHHHHCCCEEEEeccCC
Confidence 954 88998888 8999888888542 1211 245899999999999998888999999999986
Q ss_pred CccccCHHHHHHHhhh---CCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccc
Q 014163 186 GYYVMNPVKAVELVDE---NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD 262 (429)
Q Consensus 186 ~~~~~d~~~l~~~i~~---~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~ 262 (429)
+ +.+|+++|++++++ ++++|+++++||..|..+|+++|+++||++ |+.++||+|+..+..... +
T Consensus 648 ~-G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~------Galv~vDgAq~~a~~~l~------~ 714 (993)
T PLN02414 648 K-GNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDN------GGQVYMDGANMNAQVGLT------S 714 (993)
T ss_pred C-CCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHc------CCEEEEEecCHHhccCcC------C
Confidence 5 79999999999995 679999999999999999999999999999 999999999964332111 1
Q ss_pred cCCCCeeEEEEcCcccCCCCCC-----eEEEEEeCCCCcccccccccCCCCCC----CC--CceeccCCch------hHH
Q 014163 263 FRLPLVKSINVSGHKYGLVYAG-----VGWVVWRTKDDLPDELVFHINYLGSD----QP--TFTLNFSKGS------SQI 325 (429)
Q Consensus 263 ~~~~~~d~~~~s~hK~~~~p~g-----~g~l~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~tr~~------~~~ 325 (429)
.+..++|++.++.||++++|.| +|+++++. .+...+ +.+..+. .. ...-.||.+. ..+
T Consensus 715 p~~~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~--~L~p~l---Pg~~v~~~~~~~~r~~~s~iGt~~~a~~g~al~l 789 (993)
T PLN02414 715 PGFIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK--HLAPFL---PSHPVVPTGGIPRPEKTQPLGTISAAPWGSALIL 789 (993)
T ss_pred ccccCCCEEEecCCccCCcCcccCCCCeeeEEEch--hhcccC---CCCccccCCCcccccCCCCcCCccchhhhhHHHH
Confidence 1234799999999998886664 89998865 222221 2221000 00 0111256432 344
Q ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCC-CCceEEEEEecC---CCCCCHHHHHHHHHHHHhc
Q 014163 326 IAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKD-VGVPLVAFSLKD---SSAHTVFEISEGLRKKLNR 401 (429)
Q Consensus 326 ~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~v~f~~~~---~~~~~~~~~~~~L~~~l~~ 401 (429)
...|..+..+|.+|+++..++...+++|++++|++..++....++ ...+-+.+.+.. ..+++..+++++|. +
T Consensus 790 ~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hEfv~~~~~l~~~~g~~~~di~krL~----d 865 (993)
T PLN02414 790 PISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHEFIIDLRPFKNTAGIEPEDVAKRLM----D 865 (993)
T ss_pred HHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeeeEEEeccccccccCCCHHHHHHHHH----H
Confidence 566777788999999999999999999999999874333333221 133445555442 11366788888888 9
Q ss_pred cCceecccCCCCCCCceEEEEEec
Q 014163 402 FQVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 402 ~G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
.|+...+.. ++....|||+.+
T Consensus 866 ~Gihapt~~---~pv~~~lmiepT 886 (993)
T PLN02414 866 YGFHAPTMS---WPVPGTLMIEPT 886 (993)
T ss_pred cCcEEeeec---cccCCEEEEEee
Confidence 999865421 344667999875
No 57
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.93 E-value=1.1e-23 Score=207.55 Aligned_cols=328 Identities=13% Similarity=0.025 Sum_probs=219.5
Q ss_pred CCccccccccCC--ChHHHHHHHHHHcCcC-CCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHH
Q 014163 56 PRLNLASFVTTW--MEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIML 132 (429)
Q Consensus 56 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~ 132 (429)
+.++|..+.+.+ +++.+.+.+.+.++.. ...|....+..++++.+.+++++.+|.+.+.. ..+++|+|+++++.+
T Consensus 40 ~~i~l~~g~~~~~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~--~~I~it~Ga~~al~~ 117 (405)
T PRK06207 40 RPVDFSHGDVDAHEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAA--DELIITPGTQGALFL 117 (405)
T ss_pred CceecCCcCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--CCEEEeCCcHHHHHH
Confidence 335666666653 4566777777766543 23465566888999999999999999754321 138899999999998
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEecc----CCccccCHHHHHHHhhhCCeEEEE
Q 014163 133 AGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE----EGYYVMNPVKAVELVDENTICVAA 208 (429)
Q Consensus 133 al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~----~~~~~~d~~~l~~~i~~~~~~v~~ 208 (429)
++.++.+ .++.|+++.++|+.+...++..|++++.|+++ ++++.+|+++|++++++++++|++
T Consensus 118 ~~~~l~~-------------~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~l 184 (405)
T PRK06207 118 AVAATVA-------------RGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLF 184 (405)
T ss_pred HHHHhcC-------------CCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEEEE
Confidence 8887754 23689999999999999999999999999985 124789999999999988999999
Q ss_pred eeCCCccccccC---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCc--ccc--CCCCeeEEEEcCcccC-C
Q 014163 209 ILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE--WDF--RLPLVKSINVSGHKYG-L 280 (429)
Q Consensus 209 ~~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~--~~~~~d~~~~s~hK~~-~ 280 (429)
++|+||||.+.+ +++|+++|+++ ++++++|++|+.+.. ...... ..+ ..+++ .+..|..|.+ +
T Consensus 185 ~~P~NPTG~~~s~e~l~~l~~~a~~~------~~~iI~De~Y~~~~~--~~~~~~~~~~~~~~~~~v-i~i~SfSK~~~l 255 (405)
T PRK06207 185 SNPNNPAGVVYSAEEIAQIAALARRY------GATVIVDQLYSRLLY--DGTSYTHLRALPIDPENV-ITIMGPSKTESL 255 (405)
T ss_pred CCCCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEecccccccc--CCCCCCchhcCCCCcCcE-EEEecchhhccC
Confidence 999999999965 77889999999 999999999987431 111100 011 11223 3444555654 4
Q ss_pred CCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHHHHHH
Q 014163 281 VYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG--FEGYKNIMENCMGNARALREGL 358 (429)
Q Consensus 281 ~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~--~~g~~~~~~~~~~~~~~l~~~L 358 (429)
++.++||++.. ++ +.+.+.....+... +. ..+.+.++...+. ...+++.+++..++++++.+.|
T Consensus 256 pGlRiG~ii~~-~~-l~~~~~~~~~~~~~--------~~----~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L 321 (405)
T PRK06207 256 SGYRLGVAFGS-PA-IIDRMEKLQAIVSL--------RA----AGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVL 321 (405)
T ss_pred cccceEEEEcC-HH-HHHHHHHHHhHhcc--------CC----CHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 88899998753 22 22222211111110 11 1123333344442 2346777888888899999999
Q ss_pred HhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEecc
Q 014163 359 EKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHL 426 (429)
Q Consensus 359 ~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~ 426 (429)
++++++++..+. ....+.+++++. ..+..++.+.|.+ ++|+.+.+.......+..++|+|++.
T Consensus 322 ~~~~~~~~~~p~-gg~fl~~~l~~~-~~~~~~~~~~l~~---~~gV~v~pG~~F~~~~~~~~Ris~~~ 384 (405)
T PRK06207 322 RGVEGVFVRAPQ-AGSYLFPRLPRL-AVSLHDFVKILRL---QAGVIVTPGTEFSPHTADSIRLNFSQ 384 (405)
T ss_pred hcCCCceecCCC-eeEEEEEeCccc-CCCHHHHHHHHHH---hcCEEEeCchHhCCCCCCeEEEEecC
Confidence 988667755332 334444555321 2466777777741 57999887521112234679999975
No 58
>PRK12414 putative aminotransferase; Provisional
Probab=99.93 E-value=7e-24 Score=207.84 Aligned_cols=328 Identities=14% Similarity=0.050 Sum_probs=219.5
Q ss_pred CCccccccccCCC-hHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHH
Q 014163 56 PRLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (429)
Q Consensus 56 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al 134 (429)
+.++|+.+.|..+ ++.+.+++.+.+......|....+..++++++.+++++++|++.+.. ..+++|+|+++++.+++
T Consensus 30 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~--~~i~it~g~~~al~~~~ 107 (384)
T PRK12414 30 DALNLSQGAPNFAPDPALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDPA--SEVTVIASASEGLYAAI 107 (384)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCC--CcEEEECChHHHHHHHH
Confidence 3456777777654 56677777766554434566667889999999999999999863221 13889999999999888
Q ss_pred HHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCc
Q 014163 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL 214 (429)
Q Consensus 135 ~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~ 214 (429)
.++.+ .++.|+++.++|..+...++..|++++.+|++++++.+|++.|++++++++++|++++++||
T Consensus 108 ~~l~~-------------~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~NP 174 (384)
T PRK12414 108 SALVH-------------PGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEDFRVNWDEVAAAITPRTRMIIVNTPHNP 174 (384)
T ss_pred HHhcC-------------CCCEEEEeCCCccchHHHHHHcCCEEEEEecCccccccCHHHHHhhcCcccEEEEEcCCCCC
Confidence 87754 23689999999999999999999999999987545789999999999888999999999999
Q ss_pred cccc---cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCC-c-ccc-CCCCeeEEEEcCcccC-CCCCCeEE
Q 014163 215 TGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-E-WDF-RLPLVKSINVSGHKYG-LVYAGVGW 287 (429)
Q Consensus 215 tG~~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~-~~~-~~~~~d~~~~s~hK~~-~~p~g~g~ 287 (429)
||.+ +++++|+++|++| ++++++|++|..+.. ..... . ..+ ....-..+..|..|.+ +++.++||
T Consensus 175 TG~~~s~~~~~~i~~~a~~~------~~~ii~De~Y~~~~~--~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~ 246 (384)
T PRK12414 175 SATVFSAADLARLAQLTRNT------DIVILSDEVYEHVVF--DGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGY 246 (384)
T ss_pred CCcCCCHHHHHHHHHHHHHC------CeEEEEhhhhhhccC--CCCCccCcccCcCccCcEEEEecccccccCccceEEE
Confidence 9997 5788999999999 999999999986431 11111 0 011 1111234555667755 68899999
Q ss_pred EEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHHHHHHhCCCeEE
Q 014163 288 VVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF-EGYKNIMENCMGNARALREGLEKTGRFEI 366 (429)
Q Consensus 288 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~-~g~~~~~~~~~~~~~~l~~~L~~~~~~~~ 366 (429)
++..+ + +...+.....+.. .+ ...+.+.++...+.. ..+.+..+...++++++.+.|++.+ +.+
T Consensus 247 ~v~~~-~-l~~~l~~~~~~~~---------~~---~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~ 311 (384)
T PRK12414 247 CLAPA-E-LMDEIRKVHQFMV---------FS---ADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAGSR-FEL 311 (384)
T ss_pred EecCH-H-HHHHHHHHHhhee---------cC---CCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhCC-Cee
Confidence 88643 2 2222211111110 01 122334444444432 2344566777889999999999885 765
Q ss_pred eeCCCCceEEEE-EecCCCCCCHHHHH-HHHHHHHhccCceeccc--CCCCCCCceEEEEEeccc
Q 014163 367 LSKDVGVPLVAF-SLKDSSAHTVFEIS-EGLRKKLNRFQVVYPQK--LPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 367 ~~~~~~~~~v~f-~~~~~~~~~~~~~~-~~L~~~l~~~G~~~~~~--~~~~~~~~~~lRi~~~~~ 427 (429)
.. + ..+++.| ++.+..+.+..++. +.|. ++|+.+.+. +.....+..++||+++..
T Consensus 312 ~~-~-~gg~~~~~~~~~~~~~~~~~~~~~~l~----~~gV~v~pg~~f~~~~~~~~~iRis~~~~ 370 (384)
T PRK12414 312 LP-S-EGSFFMLARFRHFSDESDSDFVLRLIR----DARVATIPLSAFYTDGTDTGLIRLSFSKD 370 (384)
T ss_pred cC-C-CcceEEEEcccccCCCCHHHHHHHHHH----hCCEEEecchhhcCCCCCCCEEEEEecCC
Confidence 53 3 4565555 55321122344555 3444 789998775 221112246899999853
No 59
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.93 E-value=1.1e-23 Score=206.82 Aligned_cols=327 Identities=13% Similarity=0.072 Sum_probs=221.1
Q ss_pred CCccccccccCC-ChHHHHHHHHHHcCc-CCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHH
Q 014163 56 PRLNLASFVTTW-MEPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLA 133 (429)
Q Consensus 56 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~a 133 (429)
+.++|+.+.+++ +++.+.+++...+.. ....|....+..++++.+++++++.+|.+.+.+ ..+.+|+|+++++..+
T Consensus 28 ~~~~l~~g~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~--~~i~~t~G~~~~l~~~ 105 (389)
T PRK05957 28 GTISLGQGVVSYPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNE--QAIVVTAGSNMAFMNA 105 (389)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--CeEEEeCChHHHHHHH
Confidence 446677777765 445578888776643 223466667888999999999999999753211 2378999999999888
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCC
Q 014163 134 GLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGST 213 (429)
Q Consensus 134 l~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~ 213 (429)
+.++.. .++.|++++++|..+...++..|++++.+|.+++ +.+|+++|++++++++++|++++++|
T Consensus 106 ~~~~~~-------------~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~klv~~~~p~N 171 (389)
T PRK05957 106 ILAITD-------------PGDEIILNTPYYFNHEMAITMAGCQPILVPTDDN-YQLQPEAIEQAITPKTRAIVTISPNN 171 (389)
T ss_pred HHHhcC-------------CCCEEEEeCCCCcCHHHHHHhcCCEEEEeecCCC-CCcCHHHHHHhcCcCceEEEEeCCCC
Confidence 877643 2368999999998888888889999999998754 78999999999998999999999999
Q ss_pred ccccccC---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCC-Cc-ccc-CCCCeeEEEEcCcccC-CCCCCeE
Q 014163 214 LTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD-LE-WDF-RLPLVKSINVSGHKYG-LVYAGVG 286 (429)
Q Consensus 214 ~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~-~~-~~~-~~~~~d~~~~s~hK~~-~~p~g~g 286 (429)
|||.+.+ +++|+++|+++ |+++++|++|+.+.. .... .. ..+ ....-.++..+.-|.+ .++.++|
T Consensus 172 PtG~~~~~~~~~~i~~~a~~~------~~~li~De~y~~~~~--~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG 243 (389)
T PRK05957 172 PTGVVYPEALLRAVNQICAEH------GIYHISDEAYEYFTY--DGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIG 243 (389)
T ss_pred CCCcCcCHHHHHHHHHHHHHc------CcEEEEeccchhccC--CCCCccChhhCCCccCcEEEEecchhhccCccceeE
Confidence 9999976 88999999999 999999999986432 1111 01 011 1111123334445765 5778899
Q ss_pred EEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHc--CHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 014163 287 WVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEGYKNIMENCMGNARALREGLEKTGRF 364 (429)
Q Consensus 287 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l--~~~g~~~~~~~~~~~~~~l~~~L~~~~~~ 364 (429)
|+++.+ + +.+.+........ .+ .....+.++...+ +.+.+++..++..++++++.+.|++++++
T Consensus 244 ~~~~~~-~-~~~~~~~~~~~~~---------~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~ 309 (389)
T PRK05957 244 YMVIPI-H-LLEAIKKIQDTIL---------IC---PPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDR 309 (389)
T ss_pred EEecCH-H-HHHHHHHHHhhcc---------cC---CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 998643 2 2222221111111 01 1123444445444 23456778888889999999999988754
Q ss_pred EEeeCCCCceEEE-EEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEecc
Q 014163 365 EILSKDVGVPLVA-FSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHL 426 (429)
Q Consensus 365 ~~~~~~~~~~~v~-f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~ 426 (429)
..+.++ ..++++ +++.+ +++..++.+.|.+ ++|+.+.+.......+..++|++++.
T Consensus 310 ~~~~~~-~gg~~~~~~~~~--~~~~~~~~~~l~~---~~gv~v~pg~~f~~~~~~~iRis~~~ 366 (389)
T PRK05957 310 CTLHPA-NGAFYCFLKVNT--DLNDFELVKQLIR---EYRVAVIPGTTFGMKNGCYLRIAYGA 366 (389)
T ss_pred ccccCC-CeeEEEEEeCCC--CCChHHHHHHHHH---HCCEEEccchhhCCCCCCEEEEEEec
Confidence 233344 445544 44432 4677788888752 57999876521122334579999964
No 60
>PRK09082 methionine aminotransferase; Validated
Probab=99.93 E-value=4.7e-24 Score=209.31 Aligned_cols=329 Identities=14% Similarity=0.044 Sum_probs=224.6
Q ss_pred CCccccccccCCC-hHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHH
Q 014163 56 PRLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (429)
Q Consensus 56 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al 134 (429)
..++|+.+.++.+ ++.+.+.+...+......|....+..++++++.+++.+++|.+.+.. ..+++|+|+++|+.+++
T Consensus 31 ~~i~l~~g~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~--~~i~~t~G~~~al~~~~ 108 (386)
T PRK09082 31 GAINLSQGFPDFDGPPYLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDAD--SEITVTAGATEALFAAI 108 (386)
T ss_pred CEEEecCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCC--CcEEEeCCHHHHHHHHH
Confidence 3456777776654 45677777777655444566667889999999999999999864321 13889999999999888
Q ss_pred HHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCc
Q 014163 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL 214 (429)
Q Consensus 135 ~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~ 214 (429)
.+... .++.|+++.++|.++..+++..|+++..++++++++.+|++++++++++++++|++++++||
T Consensus 109 ~~~~~-------------~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NP 175 (386)
T PRK09082 109 LALVR-------------PGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAISPRTRLIILNTPHNP 175 (386)
T ss_pred HHHcC-------------CCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccccCCHHHHHHhcCccceEEEEeCCCCC
Confidence 87654 23689999999999999999999999999997545899999999999988999999999999
Q ss_pred cccc---cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCc--ccc-CCCCeeEEEEcCcccC-CCCCCeEE
Q 014163 215 TGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE--WDF-RLPLVKSINVSGHKYG-LVYAGVGW 287 (429)
Q Consensus 215 tG~~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~-~~~~~d~~~~s~hK~~-~~p~g~g~ 287 (429)
||.+ +++++|.++|++| ++++++|++|+.+.. ...... ..+ +...-..+..+..|.+ +++.++||
T Consensus 176 tG~~~~~~~~~~i~~~a~~~------~i~li~De~y~~~~~--~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~ 247 (386)
T PRK09082 176 SGTVWSAADMRALWQLIAGT------DIYVLSDEVYEHIVF--DGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGY 247 (386)
T ss_pred CCcCCCHHHHHHHHHHHHHC------CEEEEEehhhhhhcc--CCCCCCChhhCcCccCcEEEEeechhhccchhhhhhh
Confidence 9987 6789999999999 999999999986432 111110 011 1112334555666765 68889999
Q ss_pred EEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHc--CHHHHHHHHHHHHHHHHHHHHHHHhCCCeE
Q 014163 288 VVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEGYKNIMENCMGNARALREGLEKTGRFE 365 (429)
Q Consensus 288 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l--~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~ 365 (429)
++.. ++ +...+.....+... + .....+.++...+ ..+.+++..+...++++++.+.|++.+ ++
T Consensus 248 iv~~-~~-l~~~~~~~~~~~~~---------~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~ 312 (386)
T PRK09082 248 CVAP-AA-LSAEFRKVHQYNTF---------T---VNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALANSR-FK 312 (386)
T ss_pred hhCC-HH-HHHHHHHHHhhhcC---------C---CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhCC-Cc
Confidence 8864 22 22222111111111 1 1222233333333 344566677778889999999999864 66
Q ss_pred EeeCCCCceEEE-EEecCCCCCCHHHHHHHHHHHHhccCceeccc--CCCCCCCceEEEEEeccc
Q 014163 366 ILSKDVGVPLVA-FSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK--LPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 366 ~~~~~~~~~~v~-f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~--~~~~~~~~~~lRi~~~~~ 427 (429)
+.. + ..+.++ ++++...+.+..++.+.|.+ +.|+.+.+. +.....+..++|+|++.+
T Consensus 313 ~~~-~-~g~~~~~~~~~~~~~~~~~~~~~~l~~---~~~v~v~pg~~f~~~~~~~~~~Ri~~~~~ 372 (386)
T PRK09082 313 LLP-C-EGTYFQLVDYSAISDLDDVEFCQWLTR---EHGVAAIPLSVFYADPFPHRLVRLCFAKQ 372 (386)
T ss_pred ccC-C-CeeEEEEEeccccCCCCHHHHHHHHHH---hCCEEEeCcHHhCCCCCCCCEEEEEecCC
Confidence 543 3 455544 46542124567788887632 779988765 221122346799999754
No 61
>PRK08960 hypothetical protein; Provisional
Probab=99.93 E-value=1.1e-23 Score=206.85 Aligned_cols=329 Identities=15% Similarity=0.091 Sum_probs=219.5
Q ss_pred CCCCccccccccCCC-hHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHH
Q 014163 54 GNPRLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIML 132 (429)
Q Consensus 54 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~ 132 (429)
+++.++|..+.++++ ++.+.+++.+++..+...|....+..++++.+.+++.+.+|.+.+. ..+.+|+|+++++.+
T Consensus 31 ~~~~i~l~~g~~~~~~~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~---~~i~it~G~~~al~~ 107 (387)
T PRK08960 31 GHDVIHLEIGEPDFTTAEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVDP---ERILVTPGGSGALLL 107 (387)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCCh---hhEEEccCcHHHHHH
Confidence 445566788888754 5668888888776544456666788899999999988877765432 238899999999998
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCC-ccccCHHHHHHHhhhCCeEEEEeeC
Q 014163 133 AGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG-YYVMNPVKAVELVDENTICVAAILG 211 (429)
Q Consensus 133 al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~-~~~~d~~~l~~~i~~~~~~v~~~~~ 211 (429)
++.++.. .++.|++++++|..+...++..|.+++.+|++++ ++.+|+++++++++++++++++++|
T Consensus 108 ~~~~~~~-------------~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p 174 (387)
T PRK08960 108 ASSLLVD-------------PGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVERHWNADTVGALVASP 174 (387)
T ss_pred HHHHhcC-------------CCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHHHHhCccceEEEEECC
Confidence 8877654 2368999999999999999999999999998743 4689999999999999999999999
Q ss_pred CCccccccC---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccC-CCCCCeEE
Q 014163 212 STLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYG-LVYAGVGW 287 (429)
Q Consensus 212 ~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~-~~p~g~g~ 287 (429)
+||||.+.+ +++|+++|+++ ++++++|++|..+.. .+.....+....-..+..|.+|.+ +++.++||
T Consensus 175 ~NPtG~~~~~~~~~~l~~~~~~~------~~~li~De~Y~~~~~---~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~ 245 (387)
T PRK08960 175 ANPTGTLLSRDELAALSQALRAR------GGHLVVDEIYHGLTY---GVDAASVLEVDDDAFVLNSFSKYFGMTGWRLGW 245 (387)
T ss_pred CCCCCcCcCHHHHHHHHHHHHHc------CCEEEEEcccccccc---CCCCCChhhccCCEEEEeecccccCCcccEEEE
Confidence 999999865 56777789999 999999999986431 111111112221234555778865 58888999
Q ss_pred EEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 014163 288 VVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG---FEGYKNIMENCMGNARALREGLEKTGRF 364 (429)
Q Consensus 288 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~---~~g~~~~~~~~~~~~~~l~~~L~~~~~~ 364 (429)
++..+ +.. ..+......... + ...+.+.++...+. ...+++..+...++++.+.+.|++.+ +
T Consensus 246 ~~~~~-~~~-~~~~~~~~~~~~--------~----~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~~-~ 310 (387)
T PRK08960 246 LVAPP-AAV-PELEKLAQNLYI--------S----ASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALRELG-F 310 (387)
T ss_pred EEcCH-HHH-HHHHHHHhhhcc--------C----CCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhcC-C
Confidence 98743 222 221111111100 1 12223333333332 23455666777888999999999875 5
Q ss_pred EEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCC-CCceEEEEEecc
Q 014163 365 EILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSY-PWSTKLRVISHL 426 (429)
Q Consensus 365 ~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~-~~~~~lRi~~~~ 426 (429)
.+...+....++.++++.. ..+..++.+.|.+ ++|+.+.+...... ....++|+|++.
T Consensus 311 ~~~~~p~g~~f~~~~~~~~-~~~~~~~~~~ll~---~~gi~v~pg~~f~~~~~~~~iRi~~~~ 369 (387)
T PRK08960 311 GIAVEPQGAFYLYADISAF-GGDAFAFCRHFLE---TEHVAFTPGLDFGRHQAGQHVRFAYTQ 369 (387)
T ss_pred cCCcCCCeeEEEEEecccc-CCCHHHHHHHHHH---hCCEEEcCchHhCCCCCCCeEEEEecC
Confidence 5433332333334444321 2456677766541 67999886511111 223579999975
No 62
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.93 E-value=1.9e-23 Score=205.84 Aligned_cols=328 Identities=11% Similarity=0.044 Sum_probs=221.2
Q ss_pred CCCCCccccccccCC-ChHHHHHHHHHHcCcC-CCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHH
Q 014163 53 DGNPRLNLASFVTTW-MEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAI 130 (429)
Q Consensus 53 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~ 130 (429)
.++..++|..+.|+. +++.+.+++...++.. ...|. .++..++++.+.+++.+..|.+.+.. ..+++|+|+++++
T Consensus 30 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~~~--~~I~it~G~~~al 106 (399)
T PRK07681 30 AGHKMIDLSIGNPDMPPADFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEYYNNTHNVILNAD--KEVLLLMGSQDGL 106 (399)
T ss_pred cCCCeEEeCCCCCCCCCCHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHHHHHHhCCCCCCC--CeEEECCCcHHHH
Confidence 344556677777754 4456788877776542 22232 36788899999999988888754321 1388999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCC-ccccCHHHHHHHhhhCCeEEEEe
Q 014163 131 MLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG-YYVMNPVKAVELVDENTICVAAI 209 (429)
Q Consensus 131 ~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~-~~~~d~~~l~~~i~~~~~~v~~~ 209 (429)
.+++.++.+ .++.|+++.++|+.+...++..|++++.+|++++ ++.+|++++++++.+++++|+++
T Consensus 107 ~~~~~~~~~-------------~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~ 173 (399)
T PRK07681 107 VHLPMVYAN-------------PGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIADKAKMMILN 173 (399)
T ss_pred HHHHHHhCC-------------CCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEe
Confidence 988877654 2368999999999999999999999999999743 47889999999998889999999
Q ss_pred eCCCccccccC---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcccc-CC---CCeeEEEEcCcccC-CC
Q 014163 210 LGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RL---PLVKSINVSGHKYG-LV 281 (429)
Q Consensus 210 ~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~---~~~d~~~~s~hK~~-~~ 281 (429)
+|+||||.+.+ +++|+++|+++ ++++++|++|+.+.. .......+ .. ..-..+..|..|.+ .+
T Consensus 174 ~P~NPTG~~~s~~~~~~i~~~a~~~------~~~iI~De~y~~~~~---~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~ 244 (399)
T PRK07681 174 FPGNPVPAMAHEDFFKEVIAFAKKH------NIIVVHDFAYAEFYF---DGNKPISFLSVPGAKEVGVEINSLSKSYSLA 244 (399)
T ss_pred CCCCCcCcCCCHHHHHHHHHHHHHc------CeEEEEeccchhhee---CCCCCCChhhCCCCcccEEEEeecccccCCc
Confidence 99999999966 78889999999 999999999987432 11111111 11 11234445667766 58
Q ss_pred CCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHc--CHHHHHHHHHHHHHHHHHHHHHHH
Q 014163 282 YAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEGYKNIMENCMGNARALREGLE 359 (429)
Q Consensus 282 p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l--~~~g~~~~~~~~~~~~~~l~~~L~ 359 (429)
+.++||++.. ++.. +.+.....+.. .+ ...+.+.++...+ +...+++..+...++++++.+.|+
T Consensus 245 GlRiG~~i~~-~~l~-~~~~~~~~~~~---------~~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~ 310 (399)
T PRK07681 245 GSRIGYMIGN-EEIV-RALTQFKSNTD---------YG---VFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFR 310 (399)
T ss_pred cceeEEEecC-HHHH-HHHHHHHhhcc---------cC---CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999753 3222 22211111110 01 1222344444444 234456667777888999999999
Q ss_pred hCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhc-cCceecccCCCCCCCceEEEEEeccc
Q 014163 360 KTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNR-FQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 360 ~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~-~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
+.+ +++..+. ...++.+++++ +.+..++.+.|. + +|+.+.+.......+..++|++++.+
T Consensus 311 ~~g-~~~~~p~-~g~f~~~~l~~--~~~~~~~~~~l~----~~~gv~v~pg~~f~~~~~~~iRis~~~~ 371 (399)
T PRK07681 311 TFG-WNVDKPA-GSMFVWAEIPK--GWTSLSFAYALM----DRANVVVTPGHAFGPHGEGFVRIALVQD 371 (399)
T ss_pred HCC-CcccCCC-eeeEEEEECCC--CCCHHHHHHHHH----HhCCEEEeCChhhCcCCCCeEEEEecCC
Confidence 885 7654442 34444445532 456677877776 5 89988765211223346799999753
No 63
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.93 E-value=5.3e-24 Score=197.52 Aligned_cols=305 Identities=13% Similarity=0.124 Sum_probs=217.5
Q ss_pred HHHHHHHHhhccCCCCCccccccccCCChHH-HHHHHHHHcCcC-CCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCC
Q 014163 41 AAYQVINDELMLDGNPRLNLASFVTTWMEPE-CDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTA 118 (429)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~ 118 (429)
.++.++.........+.. |+.++|++++|. +.+++..++... ...|...-+..++.+.+++.+++++|...+..++
T Consensus 18 ~vw~e~~~la~e~~~~~~-LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~e- 95 (420)
T KOG0257|consen 18 YVWTEINRLAAEHKVPNP-LGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDE- 95 (420)
T ss_pred cHHHHHHHHHHhcCCCCc-ccCCCCCCCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCccc-
Confidence 567777666554444432 799999988887 778888877764 3456677788999999999999999877654433
Q ss_pred CceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEecc-------CCccccC
Q 014163 119 VGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-------EGYYVMN 191 (429)
Q Consensus 119 ~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~-------~~~~~~d 191 (429)
+.+|.|+.+|+..++++.++ .+++|++.+|.+.++.....+.|..+++|+.. ..+|.+|
T Consensus 96 -VlVT~GA~~ai~~~~~~l~~-------------~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D 161 (420)
T KOG0257|consen 96 -VLVTAGANEAISSALLGLLN-------------PGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLD 161 (420)
T ss_pred -EEEecCchHHHHHHHHHHcC-------------CCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCC
Confidence 89999999999999999887 24799999999999999999999999999876 4458999
Q ss_pred HHHHHHHhhhCCeEEEEeeCCCccccc---cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcccc----C
Q 014163 192 PVKAVELVDENTICVAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF----R 264 (429)
Q Consensus 192 ~~~l~~~i~~~~~~v~~~~~~~~tG~~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~----~ 264 (429)
.+.|+.+++++|++|++|.|+||||.+ ..|++|+++|++| |+++++|++|..++. .+.....+ +
T Consensus 162 ~~~le~~~t~kTk~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~------~~lvisDevYe~~v~---d~~~h~r~aslPg 232 (420)
T KOG0257|consen 162 PEELESKITEKTKAIILNTPHNPTGKVFSREELERIAELCKKH------GLLVISDEVYEWLVY---DGNKHIRIASLPG 232 (420)
T ss_pred hHHHHhhccCCccEEEEeCCCCCcCcccCHHHHHHHHHHHHHC------CEEEEEhhHhHHHhh---CCCcceeeecCCc
Confidence 999999999999999999999999998 5689999999999 999999999987542 22101111 1
Q ss_pred -CCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchh--HHHHHHHHHHHc--C-HH
Q 014163 265 -LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSS--QIIAQYYQFIRL--G-FE 338 (429)
Q Consensus 265 -~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~--~~~~~~~al~~l--~-~~ 338 (429)
.+++-.+...++-+++++|++||++. ++ .+............ +.++-+.. .+.++...+... + ..
T Consensus 233 m~ertitvgS~gKtf~~TGWrlGW~ig-p~-~L~~~~~~vh~~~~-------~~~~Tp~q~A~a~a~~~~~~~~~p~~~y 303 (420)
T KOG0257|consen 233 MYERTITVGSFGKTFGVTGWRLGWAIG-PK-HLYSALFPVHQNFV-------FTCPTPIQEASAAAFALELACLQPGGSY 303 (420)
T ss_pred hhheEEEeccccceeeeeeeeeeeeec-hH-HhhhhHHHHhhccc-------cccCcHHHHHHHHHHhhhhhccCCcchh
Confidence 12455555556668889999999987 33 33222111111111 11111111 111222222111 1 12
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEec
Q 014163 339 GYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLK 381 (429)
Q Consensus 339 g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~ 381 (429)
...++.+...++++.|.+.|.+++ +++..+. ....+...+.
T Consensus 304 ~~~~~~~~y~~krdil~k~L~~lg-~~v~~p~-gayyl~adfs 344 (420)
T KOG0257|consen 304 FITELVKEYKEKRDILAKALEELG-LKVTGPE-GAYYLWADFS 344 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-CccccCC-CceEEEEecc
Confidence 244588889999999999999995 8888764 3444444444
No 64
>PRK08363 alanine aminotransferase; Validated
Probab=99.93 E-value=2e-23 Score=205.69 Aligned_cols=335 Identities=13% Similarity=0.044 Sum_probs=221.7
Q ss_pred cCCCCCccccccccC---C-ChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCch
Q 014163 52 LDGNPRLNLASFVTT---W-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS 127 (429)
Q Consensus 52 ~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t 127 (429)
..+.+.++|..+.|. + +++.+.+++.+.+......|...++..++++.+.+++.+.+|...+. ....+|+|++
T Consensus 27 ~~~~~~i~l~~g~p~~~~~~p~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~---~~i~it~G~~ 103 (398)
T PRK08363 27 KKGIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDITP---DDVRVTAAVT 103 (398)
T ss_pred hcCCCeEEEeCCCCCcCCCCCCHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCCh---hhEEEeCCHH
Confidence 355677788888883 3 45667888777665433345556788899999888888877754432 2388999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEE-eccCCccccCHHHHHHHhhhCCeEE
Q 014163 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEV-KLEEGYYVMNPVKAVELVDENTICV 206 (429)
Q Consensus 128 ~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v-~~~~~~~~~d~~~l~~~i~~~~~~v 206 (429)
+|+.+++.++.+ .++.|+++.++|..+..+++..|..++.+ +.+++++.+|+++|++++++++++|
T Consensus 104 ~al~~~~~~~~~-------------~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v 170 (398)
T PRK08363 104 EALQLIFGALLD-------------PGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITEKTKAI 170 (398)
T ss_pred HHHHHHHHHhCC-------------CCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCcceEEE
Confidence 999988887754 23689999999999999999999998888 5555557899999999998889999
Q ss_pred EEeeCCCccccccC---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCc-cccC-CCCeeEEEEcCccc-CC
Q 014163 207 AAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDFR-LPLVKSINVSGHKY-GL 280 (429)
Q Consensus 207 ~~~~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~-~~~~d~~~~s~hK~-~~ 280 (429)
++++|+||||.+-+ +++|+++|+++ ++++++|++|+.+.. ...... ..+. ..++ .+..|..|. ++
T Consensus 171 ~l~~p~NPtG~~~~~~~~~~l~~~a~~~------~~~li~Deay~~~~~--~~~~~~~~~~~~~~~v-i~~~SfSK~~~~ 241 (398)
T PRK08363 171 AVINPNNPTGALYEKKTLKEILDIAGEH------DLPVISDEIYDLMTY--EGKHVSPGSLTKDVPV-IVMNGLSKVYFA 241 (398)
T ss_pred EEECCCCCCCcCcCHHHHHHHHHHHHHc------CeEEEEhhhhhhhcc--CCcccCHHHcCcCCcE-EEEecchhccCC
Confidence 99999999999866 88999999999 999999999986421 111000 0111 1122 334467786 78
Q ss_pred CCCCeEEEEEeCCCCcccccccccC-CCCCCCCCceeccCCchhHHHHHHHHHHHc--CHHHHHHHHHHHHHHHHHHHHH
Q 014163 281 VYAGVGWVVWRTKDDLPDELVFHIN-YLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEGYKNIMENCMGNARALREG 357 (429)
Q Consensus 281 ~p~g~g~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~tr~~~~~~~~~~al~~l--~~~g~~~~~~~~~~~~~~l~~~ 357 (429)
++.++||+++.++..+...+..... +... .+ + .....+.++...+ ..+.+++..++..++++++.+.
T Consensus 242 ~GlRiG~~~~~~~~~~~~~l~~~~~~~~~~---~~----~---~s~~~q~~~~~~l~~~~~~l~~~~~~~~~~~~~l~~~ 311 (398)
T PRK08363 242 TGWRLGYIYFVDPEGKLAEVREAIDKLARI---RL----C---PNTPAQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKR 311 (398)
T ss_pred ccceEEEEEEeCcHHHHHHHHHHHHHHhcc---cc----c---CChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHH
Confidence 8999999987322211111111100 0000 00 0 1112233333333 2455777788888999999999
Q ss_pred HHhCCCeEEeeCCCCceEEEE-EecCCCCCCHHHHH-HHHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 358 LEKTGRFEILSKDVGVPLVAF-SLKDSSAHTVFEIS-EGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 358 L~~~~~~~~~~~~~~~~~v~f-~~~~~~~~~~~~~~-~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
|++++++.+. ++ ..+++.| ++++....+..++. +.|. ++|+.+.........+..++|+|++.+
T Consensus 312 L~~~~~~~~~-~p-~g~~~~~~~l~~~~~~~~~~~~~~~l~----~~gV~v~~g~~f~~~~~~~iRis~~~~ 377 (398)
T PRK08363 312 LNEIPGISTT-KP-QGAFYIFPRIEEGPWKDDKEFVLDVLH----EAHVLFVHGSGFGEYGAGHFRLVFLPP 377 (398)
T ss_pred HhcCCCCEec-CC-CeEEEEEEEeccCCCCCHHHHHHHHHH----hCCEEEeCchhhCCCCCCeEEEEecCC
Confidence 9998767754 33 5677766 45421111334443 3345 899998765211223456899998643
No 65
>PRK07682 hypothetical protein; Validated
Probab=99.93 E-value=1.1e-23 Score=206.30 Aligned_cols=327 Identities=12% Similarity=0.068 Sum_probs=222.3
Q ss_pred CccccccccCCC-hHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHH
Q 014163 57 RLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (429)
Q Consensus 57 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~ 135 (429)
.++|+.+.|+.. ++.+.+++.+.+......|...++..++++++.+++.+.+|.+.+.. ..+.+|+|+++|+.+++.
T Consensus 22 ~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~--~~i~~t~G~~~al~~~~~ 99 (378)
T PRK07682 22 VISLGVGEPDFVTPWNVREASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDPN--DEIIVTVGASQALDVAMR 99 (378)
T ss_pred eEEeCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCC--CcEEEeCChHHHHHHHHH
Confidence 355666666553 34467777666654444466667899999999999998888754321 138899999999998888
Q ss_pred HHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccC-CccccCHHHHHHHhhhCCeEEEEeeCCCc
Q 014163 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTL 214 (429)
Q Consensus 136 a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~~~~~ 214 (429)
++.+ .++.|++++++|+.+...++..|.++..++++. +++.+|+++|++++.+++++|++++|+||
T Consensus 100 ~l~~-------------~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NP 166 (378)
T PRK07682 100 AIIN-------------PGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNP 166 (378)
T ss_pred HhCC-------------CCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCC
Confidence 7754 236899999999999999999999999998863 34789999999999989999999999999
Q ss_pred ccccc---ChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCc--ccc-CCCCeeEEEEcCcccCC-CCCCeEE
Q 014163 215 TGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE--WDF-RLPLVKSINVSGHKYGL-VYAGVGW 287 (429)
Q Consensus 215 tG~~~---~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~-~~~~~d~~~~s~hK~~~-~p~g~g~ 287 (429)
||.+- .+++|+++|++| ++++++|++|+.+.. .+... ..+ ....-..+..+..|.++ ++.++||
T Consensus 167 tG~~~s~~~~~~l~~~~~~~------~~~ii~De~y~~~~~---~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~ 237 (378)
T PRK07682 167 TGAVLNKSELEEIAVIVEKH------DLIVLSDEIYAELTY---DEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGF 237 (378)
T ss_pred cCcCcCHHHHHHHHHHHHHc------CcEEEEehhhhhccc---CCCCCChhhcccccCCEEEEecCcccccChhhhhhh
Confidence 99985 488999999999 999999999987532 11100 011 11122355556678764 7788999
Q ss_pred EEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHc--CHHHHHHHHHHHHHHHHHHHHHHHhCCCeE
Q 014163 288 VVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEGYKNIMENCMGNARALREGLEKTGRFE 365 (429)
Q Consensus 288 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l--~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~ 365 (429)
++..+ + +.+.+.....+.. .+ ...+.+.++...+ +...+++..++..++++++.+.|++++ ++
T Consensus 238 ~~~~~-~-~i~~l~~~~~~~~---------~~---~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~-~~ 302 (378)
T PRK07682 238 IAAPV-Y-FSEAMLKIHQYSM---------MC---APTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEIG-LT 302 (378)
T ss_pred hhcCH-H-HHHHHHHHHHhhc---------cC---CCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHCC-Cc
Confidence 88643 2 2222221111110 01 1233444445444 234467777888899999999999985 76
Q ss_pred EeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 366 ILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 366 ~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
+..+ ..+++.|...++.+.+..++.+.|.+ ++|+.+.+.......+..++|+|++..
T Consensus 303 ~~~p--~g~~~~~~~~~~~~~~~~~~~~~ll~---~~gv~v~pg~~f~~~~~~~iRis~~~~ 359 (378)
T PRK07682 303 CHVP--GGAFYAFPSISSTGLSSEEFAEQLLL---EEKVAVVPGSVFGESGEGFIRCSYATS 359 (378)
T ss_pred cCCC--CeeEEEEEeccCCCCCHHHHHHHHHH---hCCEEEcCchhhCcCCCCeEEEEeCCC
Confidence 5433 45555554221223566777766541 679998765211223356899999864
No 66
>PLN02656 tyrosine transaminase
Probab=99.93 E-value=3.4e-23 Score=204.52 Aligned_cols=331 Identities=14% Similarity=0.085 Sum_probs=223.2
Q ss_pred CCCCCccccccccC----CC-hHHHHHHHHHHcCcC-CCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCc
Q 014163 53 DGNPRLNLASFVTT----WM-EPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGS 126 (429)
Q Consensus 53 ~~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~ 126 (429)
.+.+.++|..+.|. ++ ++.+.+++.+++..+ ...|....+..++++.+.+++.+.+|.+.+. ..+++|+|+
T Consensus 29 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~---~~i~~t~G~ 105 (409)
T PLN02656 29 NGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSL---DDVFITSGC 105 (409)
T ss_pred cCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCc---ccEEEeCCh
Confidence 45667888999886 43 456888888877664 3456667788999999999988877765432 248899999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEecc-CCccccCHHHHHHHhhhCCeE
Q 014163 127 SEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVMNPVKAVELVDENTIC 205 (429)
Q Consensus 127 t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~-~~~~~~d~~~l~~~i~~~~~~ 205 (429)
++|+.+++.++.+ .+++|++++++|..+...++..|++++.+|++ ++++.+|++++++++++++++
T Consensus 106 ~~al~~~~~~l~~-------------~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~ 172 (409)
T PLN02656 106 TQAIDVALSMLAR-------------PGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTVA 172 (409)
T ss_pred HHHHHHHHHHHhC-------------CCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCceE
Confidence 9999988887754 23689999999999988889999999999985 334789999999999989999
Q ss_pred EEEeeCCCccccc---cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCC-Ccc-cc-CCCCeeEEEEcCcccC
Q 014163 206 VAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD-LEW-DF-RLPLVKSINVSGHKYG 279 (429)
Q Consensus 206 v~~~~~~~~tG~~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~-~~~-~~-~~~~~d~~~~s~hK~~ 279 (429)
|++++|+||||.+ +++++|+++|+++ ++++++|++|+.+.. .... ... .+ ....+-.+...++.|+
T Consensus 173 v~l~~P~NPtG~~~s~~~~~~i~~~a~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~vi~~~SfSK~f~ 244 (409)
T PLN02656 173 LVIINPGNPCGNVYSYQHLKKIAETAEKL------KILVIADEVYGHLAF--GSNPFVPMGVFGSIVPVLTLGSLSKRWI 244 (409)
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHc------CCEEEEehhhhhccc--CCCCcccHHHhcccCcEEEEcccchhcc
Confidence 9999999999998 5789999999999 999999999987431 1111 010 11 1122333333344459
Q ss_pred CCCCCeEEEEEeCCCC------cccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC---HHHHHHHHHHHHHH
Q 014163 280 LVYAGVGWVVWRTKDD------LPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG---FEGYKNIMENCMGN 350 (429)
Q Consensus 280 ~~p~g~g~l~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~---~~g~~~~~~~~~~~ 350 (429)
++++++||++..+++. +...+....... +. ...+.+.++...+. ...+++..++..++
T Consensus 245 ~pGlRiG~~i~~~~~~~~~~~~~~~~~~~~~~~~----------~~---~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~ 311 (409)
T PLN02656 245 VPGWRLGWFVTTDPSGSFRDPKIVERIKKYFDIL----------GG---PATFIQAAVPTILEQTDESFFKKTINILKQS 311 (409)
T ss_pred CcceeEEEEEEeCcccccccHHHHHHHHHHHhhh----------cC---CCHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 9999999999754321 111111110000 11 12234444444442 34577788888899
Q ss_pred HHHHHHHHHhCCCeEEeeCCCCceEEEE-EecCC--CCC-CHHHH-HHHHHHHHhccCceecccCCCCCCCceEEEEEec
Q 014163 351 ARALREGLEKTGRFEILSKDVGVPLVAF-SLKDS--SAH-TVFEI-SEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 351 ~~~l~~~L~~~~~~~~~~~~~~~~~v~f-~~~~~--~~~-~~~~~-~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
++++.+.|++++++....++ ..+.+.| +++.. .+. +..++ .+.|. ++|+.+.+.... ....++|||++
T Consensus 312 r~~~~~~L~~~~~~~~~~~p-~gg~~~w~~l~~~~~~~~~~~~~~~~~~l~----~~gV~v~pg~~f--g~~~~iRi~~~ 384 (409)
T PLN02656 312 SDICCDRIKEIPCITCPHKP-EGSMAVMVKLNLSLLEDISDDIDFCFKLAR----EESVIILPGTAV--GLKNWLRITFA 384 (409)
T ss_pred HHHHHHHHhhCCCCcCCcCC-CeEEEEEEecchhhcCCCCCHHHHHHHHHH----hCCEEEecchhc--CCCCeEEEEeC
Confidence 99999999988644333334 4444443 44211 111 23333 34445 889998765221 23457999997
Q ss_pred cc
Q 014163 426 LR 427 (429)
Q Consensus 426 ~~ 427 (429)
.+
T Consensus 385 ~~ 386 (409)
T PLN02656 385 AD 386 (409)
T ss_pred CC
Confidence 53
No 67
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.93 E-value=4.3e-23 Score=203.69 Aligned_cols=352 Identities=13% Similarity=0.068 Sum_probs=229.9
Q ss_pred HHHHHHHHHHhhccCC-CCCccccccccC----CC-hHHHHHHHHHHcCcCC-CCCccChhhHHHHHHHHHHHHHhhCCC
Q 014163 39 KEAAYQVINDELMLDG-NPRLNLASFVTT----WM-EPECDKLVMASINKNY-VDMDEYPVTTELQNRCVNMIAHLFNTP 111 (429)
Q Consensus 39 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~le~~~~~~la~l~g~~ 111 (429)
..+....+.+.+..+. .+.++|+.+.|+ ++ ++.+.+++..+++... ..|....+..++++.+.+++.+.+|.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~ 94 (409)
T PLN00143 15 IDDAVKFLKENFNEDDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQ 94 (409)
T ss_pred HHHHHHHHHHhcccCCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCC
Confidence 4455555555444433 445778888887 44 4557788888776542 346666788899999999988877765
Q ss_pred CCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEecc-CCcccc
Q 014163 112 VADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVM 190 (429)
Q Consensus 112 ~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~-~~~~~~ 190 (429)
.+. ..+++|+|+++++.+++.++.+ .++.|+++.++|..+...++..|++++.++++ ++++.+
T Consensus 95 ~~~---~~I~it~G~~~al~~~~~~l~~-------------~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 158 (409)
T PLN00143 95 LSP---DDVYLTLGCKHAAEIIIKVLAR-------------PEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEV 158 (409)
T ss_pred CCH---hhEEEecChHHHHHHHHHHHcC-------------CCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcC
Confidence 432 2488999999999999888765 23689999999999999999999999999985 344789
Q ss_pred CHHHHHHHhhhCCeEEEEeeCCCccccccC---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCC-Cc-cccC-
Q 014163 191 NPVKAVELVDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD-LE-WDFR- 264 (429)
Q Consensus 191 d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~-~~-~~~~- 264 (429)
|+++|+++++++++.+++++|+||||.+.+ +++|+++|++| ++++++|++|..+.. .... .. ..+.
T Consensus 159 d~~~l~~~~~~~~~~~~~~nP~NPTG~~~s~~~~~~l~~~a~~~------~~~ii~De~Y~~l~~--~~~~~~~~~~~~~ 230 (409)
T PLN00143 159 DLDAVEAIADENTIAMVIINPGNPCGSVYSYEHLNKIAETARKL------GILVIADEVYGHIVF--GSKPFVPMGLFAS 230 (409)
T ss_pred CHHHHHHhcccCCEEEEEECCCCCCCCccCHHHHHHHHHHHHHc------CCeEEEEcccccccc--CCCCCcchhhhcc
Confidence 999999999888999999999999999965 77888899999 999999999987431 1111 01 0111
Q ss_pred CCCeeEEEEcCcc-cCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC---HHHH
Q 014163 265 LPLVKSINVSGHK-YGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG---FEGY 340 (429)
Q Consensus 265 ~~~~d~~~~s~hK-~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~---~~g~ 340 (429)
...+-++ .|.-| |+++++++||++..+++.+.+............... . + ...+.+.++...+. ...+
T Consensus 231 ~~~vi~~-~SfSK~f~~pGlRvG~~v~~~p~~~~~~~~~~~~~~~~~~~~-~--~----~~~~~q~a~~~~l~~~~~~~~ 302 (409)
T PLN00143 231 IVPVITL-GSISKRWMIPGWGLGWLVTCDPSGLLQICEIADSIKKALNPA-P--F----PPTFIQAAIPEILEKTTEDFF 302 (409)
T ss_pred cCcEEEE-ccchhhcCCCccceEEEEeeCchhhhhhHHHHHHHHHHHhcc-C--C----CCchHHHHHHHHHhcChHHHH
Confidence 1223333 34455 589999999998754432211100000000000000 0 1 11223444444442 3567
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCC--CCC-CHHHHHHHHHHHHhccCceecccCCCCCCCc
Q 014163 341 KNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDS--SAH-TVFEISEGLRKKLNRFQVVYPQKLPMSYPWS 417 (429)
Q Consensus 341 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~--~~~-~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~ 417 (429)
++..++.++.++++.+.|.+++.......+....++.++++.. .+. +..++...|. .++|+.+.+.... ...
T Consensus 303 ~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~gg~f~w~~l~~~~~~~~~~~~~~~~~ll---~~~gV~v~pg~~f--~~~ 377 (409)
T PLN00143 303 SKTINILRAALAFCYDKLKEIPCIMCPQKAEGAFFALVKLNLLLLEDIEDDMEFCLKLA---KEESLIILPGVTV--GLK 377 (409)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCeeEEEEEecchhhcCCCCCHHHHHHHHH---HhCCEEEeCcccc--CCC
Confidence 8888888889999999999886433333332344555555321 111 3445554442 2889998775221 234
Q ss_pred eEEEEEeccc
Q 014163 418 TKLRVISHLR 427 (429)
Q Consensus 418 ~~lRi~~~~~ 427 (429)
.++||+++.+
T Consensus 378 ~~iRi~~~~~ 387 (409)
T PLN00143 378 NWLRITFAVE 387 (409)
T ss_pred CeEEEEEcCC
Confidence 6799999753
No 68
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.93 E-value=2.8e-23 Score=189.42 Aligned_cols=335 Identities=15% Similarity=0.094 Sum_probs=229.4
Q ss_pred CCccccccccCC-----ChHHHHHHHHHHcCcCCC-CCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHH
Q 014163 56 PRLNLASFVTTW-----MEPECDKLVMASINKNYV-DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEA 129 (429)
Q Consensus 56 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a 129 (429)
|.+.++.+.|+. +.+++.+++..++..+.+ +|..+.+...-++++.+++.+-+..+-+. ..++.|+|+++|
T Consensus 62 ~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a---~DV~ltsGC~qA 138 (447)
T KOG0259|consen 62 PILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTA---DDVVLTSGCSQA 138 (447)
T ss_pred eeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCc---CceEEeccchHH
Confidence 566677777762 235678888888877654 47777788777777666654434333222 238999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEecc-CCccccCHHHHHHHhhhCCeEEEE
Q 014163 130 IMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVMNPVKAVELVDENTICVAA 208 (429)
Q Consensus 130 ~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~-~~~~~~d~~~l~~~i~~~~~~v~~ 208 (429)
+.+++.++.++ +..|++|+++++-+...|...|+++++.++- +.+|++|++.+|++++++|.++++
T Consensus 139 Ie~~i~~LA~p-------------~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT~Aivv 205 (447)
T KOG0259|consen 139 IELAISSLANP-------------GANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADENTVAIVV 205 (447)
T ss_pred HHHHHHHhcCC-------------CCceecCCCCCchHHHhhhhcCceeEeecccCcccceechHHHHHhhccCeeEEEE
Confidence 99999998652 3489999999999999999999999999874 456999999999999999999999
Q ss_pred eeCCCccccc---cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc---ccC-CCCeeEEEEcCcccCCC
Q 014163 209 ILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW---DFR-LPLVKSINVSGHKYGLV 281 (429)
Q Consensus 209 ~~~~~~tG~~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~---~~~-~~~~d~~~~s~hK~~~~ 281 (429)
+.|+||+|.+ +.+++|+++|+++ ++.++.|++|+..+. .+..-. .|. +--+-++..=++-|+-+
T Consensus 206 iNP~NPcGnVys~~HL~kiae~A~kl------gi~vIaDEVY~~~vf---g~~pfvpmg~fssiVPVitlggisKrW~VP 276 (447)
T KOG0259|consen 206 INPNNPCGNVYSEDHLKKIAETAKKL------GIMVIADEVYGHTVF---GDKPFVPMGKFSSIVPVITLGGISKRWIVP 276 (447)
T ss_pred eCCCCCCcccccHHHHHHHHHHHHHh------CCeEEehhhcceeec---CCCCccchhhccccCceEeecccccccccC
Confidence 9999999988 7899999999999 999999999987542 222111 121 11133444446779999
Q ss_pred CCCeEEEEEeCCCCccccccc---ccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH
Q 014163 282 YAGVGWVVWRTKDDLPDELVF---HINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGL 358 (429)
Q Consensus 282 p~g~g~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L 358 (429)
+|+.||++..++.-....-.. ...++.-. ..+......++-..|..-.++.+.+...-...+++...++|
T Consensus 277 GWRlGWi~~hD~~gvf~~~~~~q~~~~~~~~~-------~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~L 349 (447)
T KOG0259|consen 277 GWRLGWIALHDPRGVFRDTKVVQGIKNFLDII-------PGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSRL 349 (447)
T ss_pred CceeeeEEEecccccccchHHHHHHHHHHhcc-------CCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHHH
Confidence 999999999876432111000 01111100 01111111222223344456778888888899999999999
Q ss_pred HhCCCeEEeeCCCCceEEEEEecCC---CCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 359 EKTGRFEILSKDVGVPLVAFSLKDS---SAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 359 ~~~~~~~~~~~~~~~~~v~f~~~~~---~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
+++|++.....|..+....+.+.-. .-.+-.++.++|.+ |+.+++.+..- ..-.+++|+++.-+
T Consensus 350 k~IP~l~cp~kPeg~mylmv~l~~s~~~~~~dD~dFc~kL~~---Eesv~~LPG~a--f~~~nw~Ri~i~~~ 416 (447)
T KOG0259|consen 350 KDIPCLTCPVKPEGCMYLMVKLNLSLFPDIEDDVDFCQKLAR---EESVICLPGQA--FGLKNWLRIVITVE 416 (447)
T ss_pred hcCCCcccCcCCCcceEEEeccchhhhccccccHHHHHHHhh---hcceEEecccc--ccCCCeEEEEEccC
Confidence 9999988655554444444433211 12345677777774 77777665311 23357899998654
No 69
>PRK07324 transaminase; Validated
Probab=99.93 E-value=1.3e-23 Score=204.97 Aligned_cols=320 Identities=13% Similarity=0.034 Sum_probs=213.8
Q ss_pred CCCCCccccccccCCChHH-HHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHH
Q 014163 53 DGNPRLNLASFVTTWMEPE-CDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIM 131 (429)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~ 131 (429)
.++...++..+.|...+|. + +++..++......|....+..++++.+.+++. ++++ ..+++|+|+++|+.
T Consensus 24 ~~~~~~~~~~~e~~~~~~~~~-~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~---~~~~-----~~vi~t~G~~~al~ 94 (373)
T PRK07324 24 AESCIDSLTLEELLALAGKNP-EAFYQELGQKKLTYGWIEGSPEFKEAVASLYQ---NVKP-----ENILQTNGATGANF 94 (373)
T ss_pred ccCCCCCCcHHHHHhccCcch-HHHHHHHhcCCccCCCCCCCHHHHHHHHHHhc---CCCh-----hhEEEcCChHHHHH
Confidence 4556666777777665544 5 77777777665667666678888777554442 3443 23889999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccC-CccccCHHHHHHHhhhCCeEEEEee
Q 014163 132 LAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAIL 210 (429)
Q Consensus 132 ~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~ 210 (429)
+++.++.+ .+++|+++.++|..+...++..|++++.+|+++ +++.+|++++++++++++++|++++
T Consensus 95 ~~~~~l~~-------------~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~kli~i~~ 161 (373)
T PRK07324 95 LVLYALVE-------------PGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRPNTKLICINN 161 (373)
T ss_pred HHHHHhCC-------------CCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCCCCcEEEEeC
Confidence 99888754 236899999999999999999999999999974 3467999999999999999999999
Q ss_pred CCCccccccC---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcccc-C-CCCeeEEEEcCcccC-CCCCC
Q 014163 211 GSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-R-LPLVKSINVSGHKYG-LVYAG 284 (429)
Q Consensus 211 ~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~-~~~~d~~~~s~hK~~-~~p~g 284 (429)
|+||||.+.+ +++|+++|++| ++++++|++|..+.. ..... .+ . .++. ....+..|.+ +++++
T Consensus 162 p~NPtG~~~~~~~l~~i~~~a~~~------~~~ii~De~y~~l~~---~~~~~-s~~~~~~~~-I~~~s~SK~~~~~G~R 230 (373)
T PRK07324 162 ANNPTGALMDRAYLEEIVEIARSV------DAYVLSDEVYRPLDE---DGSTP-SIADLYEKG-ISTNSMSKTYSLPGIR 230 (373)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHC------CCEEEEEcccccccc---CCCCC-ChhhccCCE-EEEecchhhcCCccce
Confidence 9999999977 89999999999 999999999976431 11111 11 1 1222 3334566754 57889
Q ss_pred eEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHHHHHHHhCC
Q 014163 285 VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG--FEGYKNIMENCMGNARALREGLEKTG 362 (429)
Q Consensus 285 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~--~~g~~~~~~~~~~~~~~l~~~L~~~~ 362 (429)
+||++. +++.. ..+.....+.. + + ...+.++++...+. ..-+++..+...++++.+.+.|++.+
T Consensus 231 iG~i~~-~~~li-~~~~~~~~~~~-------~-~----~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~ 296 (373)
T PRK07324 231 VGWIAA-NEEVI-DILRKYRDYTM-------I-C----AGVFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKEP 296 (373)
T ss_pred eEEEec-CHHHH-HHHHHHhCcEE-------e-c----CChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999887 33222 22222111111 0 1 12233444444442 23355566667778888999998887
Q ss_pred CeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 363 RFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 363 ~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
++..+.+. ....+.+.++. +.+..++.++|.+ +.|+.+.+...... ..++|++++..
T Consensus 297 ~~~~~~p~-gg~~~~i~~~~--~~~~~~~~~~ll~---~~gv~v~pg~~F~~--~~~iRis~~~~ 353 (373)
T PRK07324 297 RVSYVKPK-AVSTSFVKLDV--DMPSEDFCLKLLK---ETGVLLVPGNRFDL--EGHVRIGYCCD 353 (373)
T ss_pred CceEECCC-ceEEEEEEeCC--CCCHHHHHHHHHH---hcCEEEECccccCC--CCeEEEEecCC
Confidence 67765443 22333334432 3566778777641 67998876522222 34799998753
No 70
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.93 E-value=2.3e-23 Score=211.41 Aligned_cols=335 Identities=13% Similarity=0.063 Sum_probs=216.7
Q ss_pred cCCCCCccccccccC---CC-hHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCch
Q 014163 52 LDGNPRLNLASFVTT---WM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS 127 (429)
Q Consensus 52 ~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t 127 (429)
..++..++|..+.|. ++ ++.+.+.+.+.+.. ...|....+..++++++.+++.+..+...+. ..+++|+|++
T Consensus 143 ~~g~~~i~l~~G~p~~~~~~~p~~~~~~~~~~~~~-~~~Y~~~~G~~~lReaia~~~~~~~~~~~~~---~~I~it~G~~ 218 (517)
T PRK13355 143 AAGTHILKLNIGNPAPFGFRTPDEVVYDMAQQLTD-TEGYSDSKGLFSARKAIMQYAQLKGLPNVDV---DDIYTGNGVS 218 (517)
T ss_pred HcCCCeEEecCcCCCcCCCCCCHHHHHHHHHHhhc-CCCCCCCcChHHHHHHHHHHHHhcCCCCCCh---hHEEEeCcHH
Confidence 356666778887773 32 45577777666653 3346666788899989888886654332221 2389999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccC-CccccCHHHHHHHhhhCCeEE
Q 014163 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICV 206 (429)
Q Consensus 128 ~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~~~~~v 206 (429)
+++.+++.++.+ .+++|+++.++|+.+..+++..|++++.+++++ ++|.+|+++|++++++++++|
T Consensus 219 eal~~~~~~l~~-------------~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~k~i 285 (517)
T PRK13355 219 ELINLSMSALLD-------------DGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWYPDIDDIRSKITSRTKAI 285 (517)
T ss_pred HHHHHHHHHhCC-------------CCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCCCCHHHHHHhcCcCceEE
Confidence 999999888754 236899999999999999999999999999874 348899999999999999999
Q ss_pred EEeeCCCccccccC---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcccc-C-CCCeeEEE-EcCcc-cC
Q 014163 207 AAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-R-LPLVKSIN-VSGHK-YG 279 (429)
Q Consensus 207 ~~~~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~-~~~~d~~~-~s~hK-~~ 279 (429)
++++|+||||.+.+ +++|+++|++| +++|++|++|..+.. .......+ . .....+++ .+.-| ++
T Consensus 286 ~i~nP~NPTG~v~~~~~l~~i~~~a~~~------~~~ii~DE~Y~~~~~---~~~~~~s~~~~~~~~~vi~~~S~SK~~~ 356 (517)
T PRK13355 286 VIINPNNPTGALYPREVLQQIVDIAREH------QLIIFSDEIYDRLVM---DGLEHTSIASLAPDLFCVTFSGLSKSHM 356 (517)
T ss_pred EEECCCCCCCcCcCHHHHHHHHHHHHHc------CcEEEEehhhhhhcC---CCCCcccHHHhCCCCeEEEEecchhhcc
Confidence 99999999999966 88999999999 999999999986431 11110111 1 12222333 23355 57
Q ss_pred CCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCH-HHHHHH---HHHHHHHHHHHH
Q 014163 280 LVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF-EGYKNI---MENCMGNARALR 355 (429)
Q Consensus 280 ~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~-~g~~~~---~~~~~~~~~~l~ 355 (429)
++++++||+++..+..+...+......... .+......+++++...+.. +.+.+. ..+..+.++++.
T Consensus 357 ~~G~RiG~~i~~~~~~~~~~~~~~l~~~~~---------~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~r~~l~ 427 (517)
T PRK13355 357 IAGYRIGWMILSGNKRIAKDYIEGLNMLAN---------MRLCSNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQRELVY 427 (517)
T ss_pred CcccceEEEEeeCchhhHHHHHHHHHHHhc---------CcCCcChHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHH
Confidence 899999999864322110100000000000 0001123345555554431 112222 234556789999
Q ss_pred HHHHhCCCeEEeeCCCCceEEEE-EecCCC--CCCHHHHHH-HHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 356 EGLEKTGRFEILSKDVGVPLVAF-SLKDSS--AHTVFEISE-GLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 356 ~~L~~~~~~~~~~~~~~~~~v~f-~~~~~~--~~~~~~~~~-~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
+.|++++++++..+ ..++++| ++.... ..+..++.. .|. ++|+.+.+.......+..++|++++.+
T Consensus 428 ~~L~~~~g~~~~~p--~g~fy~~~~l~~~~~~~~~~~~~~~~ll~----~~gV~v~pg~~F~~~~~~~~Ris~~~~ 497 (517)
T PRK13355 428 NALNAIPGISAVKP--KAAFYIFPKIDVKKFNIHDDEQFALDLLH----DKKVLIVQGTGFNWDKPDHFRVVYLPR 497 (517)
T ss_pred HHHhcCCCcccCCC--CeeeEEEeecCcccCCCCCHHHHHHHHHH----hCCEEEeCcchhCCCCcCEEEEEeCCC
Confidence 99999877876533 5777776 553210 112334443 344 889998765222223456799999643
No 71
>PRK08912 hypothetical protein; Provisional
Probab=99.93 E-value=2.6e-23 Score=204.25 Aligned_cols=329 Identities=15% Similarity=0.054 Sum_probs=220.3
Q ss_pred CCccccccccCCC-hHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHH
Q 014163 56 PRLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (429)
Q Consensus 56 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al 134 (429)
..++|+.+.|+.+ ++.+.+.+...+......|....+..++++.+.+++.+.+|.+.+.. ..+++|+|+++|+..++
T Consensus 27 ~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~--~~i~~t~G~~~al~~~~ 104 (387)
T PRK08912 27 GAINLGQGFPDDPGPEDVRRAAADALLDGSNQYPPMMGLPELRQAVAAHYARFQGLDLDPE--TEVMVTSGATEALAAAL 104 (387)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCc--ccEEEeCCcHHHHHHHH
Confidence 3466777777654 34566666555543334465666788999999999988888754321 13889999999998887
Q ss_pred HHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCc
Q 014163 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL 214 (429)
Q Consensus 135 ~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~ 214 (429)
.+..+ .+++|+++.++|..+..+++..|++++.+|++++++.+|+++|++.+.+++++|++++|+||
T Consensus 105 ~~~~~-------------~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NP 171 (387)
T PRK08912 105 LALVE-------------PGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEPPHWRLPRAALAAAFSPRTKAVLLNNPLNP 171 (387)
T ss_pred HHhcC-------------CCCEEEEeCCCchhhHHHHHHcCCEEEEEecCcccCcCCHHHHHHHhCccceEEEEeCCCCC
Confidence 77643 23689999999999999999999999999997545789999999999888999999999999
Q ss_pred cccccC---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCC-c-ccc-CCCCeeEEEEcCcccCC-CCCCeEE
Q 014163 215 TGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-E-WDF-RLPLVKSINVSGHKYGL-VYAGVGW 287 (429)
Q Consensus 215 tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~-~~~-~~~~~d~~~~s~hK~~~-~p~g~g~ 287 (429)
||.+.+ +++|.++|++| ++++++|++|+.+.. ..... . ..+ +...-+.+..+..|.++ ++.++|+
T Consensus 172 tG~~~s~~~~~~i~~~~~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~ 243 (387)
T PRK08912 172 AGKVFPREELALLAEFCQRH------DAVAICDEVWEHVVF--DGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGF 243 (387)
T ss_pred cCcccCHHHHHHHHHHHHHC------CeEEEEhhhhhhccc--CCCCCcChhhCCCccCceEEEeechhhccCcCceeEE
Confidence 999865 77799999999 999999999976431 11010 1 111 11234677778888765 7788999
Q ss_pred EEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHc--CHHHHHHHHHHHHHHHHHHHHHHHhCCCeE
Q 014163 288 VVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEGYKNIMENCMGNARALREGLEKTGRFE 365 (429)
Q Consensus 288 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l--~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~ 365 (429)
++... +.. +.+........ .+.+.. .+.++...+ ..+.+++..++..++++++.+.|++.+ ++
T Consensus 244 ~~~~~-~~~-~~l~~~~~~~~---------~~~~~~---~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~ 308 (387)
T PRK08912 244 VCAAP-PLL-RVLAKAHQFLT---------FTTPPN---LQAAVAYGLGKPDDYFEGMRADLARSRDRLAAGLRRIG-FP 308 (387)
T ss_pred EecCH-HHH-HHHHHHHhhcc---------ccCChH---HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC-Cc
Confidence 88743 222 22211111110 011111 122222222 234456777888899999999999985 76
Q ss_pred EeeCCCCce-EEEEEecC-CCCCCHHHHHHHHHHHHhccCceeccc--CCCCCCCceEEEEEeccc
Q 014163 366 ILSKDVGVP-LVAFSLKD-SSAHTVFEISEGLRKKLNRFQVVYPQK--LPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 366 ~~~~~~~~~-~v~f~~~~-~~~~~~~~~~~~L~~~l~~~G~~~~~~--~~~~~~~~~~lRi~~~~~ 427 (429)
+..+ ..+ ++.+.+++ ....+..++.+.|.+ ++|+.+.+. +........++|++++.+
T Consensus 309 ~~~~--~g~~~l~~~l~~~~~~~~~~~~~~~l~~---~~gV~v~pg~~f~~~~~~~~~iRl~~~~~ 369 (387)
T PRK08912 309 VLPS--QGTYFLTVDLAPLGLAEDDVAFCRRLVE---EAGVAAIPVSAFYEEDPVTSVVRFCFAKR 369 (387)
T ss_pred ccCC--CcceEEEecccccCCCCCHHHHHHHHHh---cCCEEEecchhhCCCCCCCCEEEEEEeCC
Confidence 6533 344 44445543 112456677777641 679988765 222223356899999853
No 72
>PLN02187 rooty/superroot1
Probab=99.93 E-value=8.4e-23 Score=203.86 Aligned_cols=335 Identities=13% Similarity=0.055 Sum_probs=220.9
Q ss_pred CCCCccccccccC----CC-hHHHHHHHHHHcCcCC-CCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCch
Q 014163 54 GNPRLNLASFVTT----WM-EPECDKLVMASINKNY-VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS 127 (429)
Q Consensus 54 ~~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t 127 (429)
..+.++|+.+.|+ +. ++.+.+.+..++..+. ..|....+..++++.+.+++.+.+|.+.+. ..+++|+|++
T Consensus 65 ~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~---~~I~it~G~~ 141 (462)
T PLN02187 65 NKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTP---EDIFLTAGCN 141 (462)
T ss_pred CCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCc---ccEEEeCCHH
Confidence 3455677877776 32 3457777777765432 345566788889999988888777765432 2488999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEecc-CCccccCHHHHHHHhhhCCeEE
Q 014163 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVMNPVKAVELVDENTICV 206 (429)
Q Consensus 128 ~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~-~~~~~~d~~~l~~~i~~~~~~v 206 (429)
+++.+++.++.+ .++.|+++.++|+.+...++..|++++.+++. ++++.+|+++|+++++++++++
T Consensus 142 ~al~~~~~~l~~-------------pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~~~~~v 208 (462)
T PLN02187 142 QGIEIVFESLAR-------------PNANILLPRPGFPHYDARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTVAM 208 (462)
T ss_pred HHHHHHHHHhcC-------------CCCEEEEeCCCCccHHHHHHHcCCEEEEEeCccccCCccCHHHHHHhcCCCcEEE
Confidence 999999988764 23689999999999999999999999999985 2358999999999999899999
Q ss_pred EEeeCCCccccccC---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCC-c-ccc-CCCCeeEEEEcCcccCC
Q 014163 207 AAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-E-WDF-RLPLVKSINVSGHKYGL 280 (429)
Q Consensus 207 ~~~~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~-~~~-~~~~~d~~~~s~hK~~~ 280 (429)
++++|+||||.+-+ +++|+++|++| ++++++|++|+.+.. ..... . ..+ ....+-.+...++.|+.
T Consensus 209 ~i~nP~NPTG~v~s~e~l~~i~~~a~~~------~i~iI~DE~Y~~l~f--~~~~~~s~~~~~~~~~vi~l~SfSK~f~~ 280 (462)
T PLN02187 209 VVINPNNPCGNVYSHDHLKKVAETARKL------GIMVISDEVYDRTIF--GDNPFVSMGKFASIVPVLTLAGISKGWVV 280 (462)
T ss_pred EEeCCCCCCCCccCHHHHHHHHHHHHHC------CCEEEEecccccccc--CCCCceeHHHhccCCcEEEEecchhhcCC
Confidence 99999999999855 88899999999 999999999987431 11111 0 011 11123333434455699
Q ss_pred CCCCeEEEEEeCCCCcc---cccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHH
Q 014163 281 VYAGVGWVVWRTKDDLP---DELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL---GFEGYKNIMENCMGNARAL 354 (429)
Q Consensus 281 ~p~g~g~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l---~~~g~~~~~~~~~~~~~~l 354 (429)
+++++||++..+++... ..+.....+... ... ...+.+.++...+ ..+.+++..+...++++++
T Consensus 281 pGlRiG~~v~~~p~~~~~~~~~~~~~~~~~~~-------~~~---~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l 350 (462)
T PLN02187 281 PGWKIGWIALNDPEGVFETTKVLQSIKQNLDV-------TPD---PATIIQAALPAILEKADKNFFAKKNKILKHNVDLV 350 (462)
T ss_pred ccceeEEEEecCchhHHHHHHHHHHHHHhccc-------cCC---CCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Confidence 99999999875443211 111111111100 001 1223344444433 2455777888888999999
Q ss_pred HHHHHhCCCeEEeeCCCCceEEEEEecCC--CCC-CHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 355 REGLEKTGRFEILSKDVGVPLVAFSLKDS--SAH-TVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 355 ~~~L~~~~~~~~~~~~~~~~~v~f~~~~~--~~~-~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
.+.|++++.+..+..|.....+.+++... .+. +..++...|. .++|+.+.+.... ....++||+++.+
T Consensus 351 ~~~L~~~~~~~~~~~P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll---~~~gV~v~pG~~f--g~~~~iRis~~~~ 421 (462)
T PLN02187 351 CDRLKDIPCVVCPKKPESCTYLLTKLELSLMDNIKDDIDFCVKLA---REENLVFLPGDAL--GLKNWMRITIGVE 421 (462)
T ss_pred HHHHhhCCCCcCCCCCCEeEEEEeecChhhCCCCCCHHHHHHHHH---hhCCEEEECcccc--CCCCeEEEEeCCC
Confidence 99999987443332342334444444311 122 3445544442 2889998765211 2346799999764
No 73
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.93 E-value=3.4e-23 Score=203.80 Aligned_cols=331 Identities=11% Similarity=0.021 Sum_probs=215.0
Q ss_pred CCCCCccccccccCCChH-HHHHHHHHHcCcC-CCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHH
Q 014163 53 DGNPRLNLASFVTTWMEP-ECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAI 130 (429)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~ 130 (429)
.++..++|..+.|..+.| .+.+.+...+... ...|....+..++++++.+|+.+.+|.+.+.. ..+++|+|+++++
T Consensus 33 ~g~~~i~l~~g~p~~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~--~~i~vt~G~~~al 110 (394)
T PRK05942 33 QGLDLIDLGMGNPDGAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPD--SEALPLLGSKEGL 110 (394)
T ss_pred cCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCC--CeEEEccChHHHH
Confidence 344456667766665433 3555555444332 23455556778999999999998888654321 1267899999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccC-CccccCHHHHHHHhhhCCeEEEEe
Q 014163 131 MLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAI 209 (429)
Q Consensus 131 ~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~ 209 (429)
..++.++.+ .+++|+++.++|..+...+...|++++.+|++. +++.+|++++++.+.+++++|+++
T Consensus 111 ~~~~~~~~~-------------~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~ 177 (394)
T PRK05942 111 THLALAYVN-------------PGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFN 177 (394)
T ss_pred HHHHHHhCC-------------CCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhccccceEEEEc
Confidence 988887654 236899999999998888889999999999874 347899999999998899999999
Q ss_pred eCCCccccccC---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCC-c-ccc-CCCCeeEEEEcCccc-CCCC
Q 014163 210 LGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-E-WDF-RLPLVKSINVSGHKY-GLVY 282 (429)
Q Consensus 210 ~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~-~~~-~~~~~d~~~~s~hK~-~~~p 282 (429)
+|+||||.+.+ +++|.++|+++ ++++++|++|+.+.. ..... . ..+ ..........+.-|. ++++
T Consensus 178 ~P~NPtG~~~s~~~~~~i~~~a~~~------~~~iI~De~y~~~~~--~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~G 249 (394)
T PRK05942 178 YPSNPTTATAPREFFEEIVAFARKY------EIMLVHDLCYAELAF--DGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAG 249 (394)
T ss_pred CCCCCCCCcCCHHHHHHHHHHHHHc------CeEEEEeccchhhcc--CCCCCCChhhCCCccccEEEEecchhccCChh
Confidence 99999999976 78899999999 999999999986431 11000 0 011 112233334455584 4688
Q ss_pred CCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 014163 283 AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTG 362 (429)
Q Consensus 283 ~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~ 362 (429)
.++||++... + +.+.+.....+.. .+.+.....++..+++ ...+.+++..++..++++++.+.|++.+
T Consensus 250 lRiG~i~~~~-~-l~~~l~~~~~~~~---------~~~~~~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~~ 317 (394)
T PRK05942 250 WRVGFVVGNR-H-IIQGLRTLKTNLD---------YGIFSALQKAAETALQ-LPDSYLQQVQERYRTRRDFLIQGLGELG 317 (394)
T ss_pred hheeeeecCH-H-HHHHHHHHHhhcc---------cCCCHHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 8999998632 2 2222221111111 1111111122222232 1245567777888889999999998875
Q ss_pred CeEEeeCCCCceEE-EEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEecc
Q 014163 363 RFEILSKDVGVPLV-AFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHL 426 (429)
Q Consensus 363 ~~~~~~~~~~~~~v-~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~ 426 (429)
+.+..+ ..+++ .+++++ ..+..++...+. .++|+.+.+.......+..++|+|++.
T Consensus 318 -~~~~~~--~~~~f~~~~~~~--~~~~~~~~~~~l---~~~gV~v~~g~~f~~~~~~~iRis~~~ 374 (394)
T PRK05942 318 -WNIPPT--KATMYLWVPCPV--GMGSTDFALNVL---QKTGVVVTPGNAFGEGGEGYVRISLIA 374 (394)
T ss_pred -CeecCC--CeeeEEEEECCC--CCCHHHHHHHHH---HHCCEEEeCChhhCcCCCCeEEEEecC
Confidence 765533 45544 445432 345566665432 278999876521122335689999964
No 74
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.93 E-value=5.4e-23 Score=201.74 Aligned_cols=328 Identities=15% Similarity=0.034 Sum_probs=219.5
Q ss_pred CCCCccccccccCCC-hHHHHHHHHHHcCc-CCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHH
Q 014163 54 GNPRLNLASFVTTWM-EPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIM 131 (429)
Q Consensus 54 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~ 131 (429)
+...++|..+.|+.. ++.+.+++..++.. ....|....+..++++.+.+++++.+|.+.+.. ...++|+|+++++.
T Consensus 28 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~--~~vi~t~G~~~~l~ 105 (383)
T TIGR03540 28 GVDVISLGIGDPDLPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPE--TEVLSLIGSKEGIA 105 (383)
T ss_pred CCCeEEeCCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCC--CeEEECCCcHHHHH
Confidence 444466777777654 45577877776543 233455555778999999999998888754321 12678899999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccC-CccccCHHHHHHHhhhCCeEEEEee
Q 014163 132 LAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAIL 210 (429)
Q Consensus 132 ~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~ 210 (429)
.++.++.+ .++.|++++++|..+..+++..|++++.+|+++ +++.+|++++++++.+++++|++++
T Consensus 106 ~~~~~~~~-------------~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~i~~ 172 (383)
T TIGR03540 106 HIPLAFVN-------------PGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFINY 172 (383)
T ss_pred HHHHHhCC-------------CCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccccceEEEEeC
Confidence 88887654 236899999999999999999999999999974 3467899999999988999999999
Q ss_pred CCCccccccC---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcccc-C---CCCeeEEEEcCcccC-CCC
Q 014163 211 GSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-R---LPLVKSINVSGHKYG-LVY 282 (429)
Q Consensus 211 ~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~---~~~~d~~~~s~hK~~-~~p 282 (429)
|+||||.+-+ +++|+++|++| ++++++|++|+.+.. .+.....+ . .....++..+.-|.+ .++
T Consensus 173 P~NPtG~~~~~~~~~~i~~~a~~~------~~~ii~De~y~~l~~---~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~G 243 (383)
T TIGR03540 173 PNNPTGAVAPLKFFKELVEFAKEY------NIIVCHDNAYSEITF---DGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTG 243 (383)
T ss_pred CCCCcCccCCHHHHHHHHHHHHHc------CEEEEEecchhhhcc---CCCCCcCcccCCCcccCEEEEEecccccCCcc
Confidence 9999999966 78999999999 999999999986421 11001111 1 112234444555866 577
Q ss_pred CCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHc--CHHHHHHHHHHHHHHHHHHHHHHHh
Q 014163 283 AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEGYKNIMENCMGNARALREGLEK 360 (429)
Q Consensus 283 ~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l--~~~g~~~~~~~~~~~~~~l~~~L~~ 360 (429)
.++||++.. ++.. +.+.....+... +. ....+.++...+ +.+.+++..++..++++.+.+.|++
T Consensus 244 lRiG~~i~~-~~l~-~~~~~~~~~~~~--------~~----~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~ 309 (383)
T TIGR03540 244 WRIGMAVGN-ADLI-AGLGKVKTNVDS--------GV----FQAIQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEALKK 309 (383)
T ss_pred ceeeEEeCC-HHHH-HHHHHHHHhccc--------CC----ChHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 889998753 3222 222111111100 11 112233333333 2445667777888899999999999
Q ss_pred CCCeEEeeCCCCceE-EEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 361 TGRFEILSKDVGVPL-VAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 361 ~~~~~~~~~~~~~~~-v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
.+ +.+..+ ..++ +.+++++ +.+..++.+.|.+ ++|+.+.+.......+..++|++++.+
T Consensus 310 ~~-~~~~~~--~~~~~~~~~l~~--~~~~~~~~~~ll~---~~gi~v~~g~~f~~~~~~~~Ris~~~~ 369 (383)
T TIGR03540 310 IG-IDVEKP--KATFYVWVPVPE--GYTSAEFAARLLE---ETGVVVTPGVGFGEYGEGYIRISLTVP 369 (383)
T ss_pred CC-CEecCC--CcceEEEEECCC--CCCHHHHHHHHHH---HCCEEEecchhhCccCCCeEEEEecCC
Confidence 85 776643 2344 4455532 4567777777641 689998865221222345799999753
No 75
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.93 E-value=2.7e-23 Score=202.59 Aligned_cols=278 Identities=16% Similarity=0.113 Sum_probs=189.2
Q ss_pred HHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCce
Q 014163 98 NRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVE 177 (429)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~ 177 (429)
.++++.+++++|.+. ..+++|+++++..++.++.. .++.|+++.+.|++....++..|++
T Consensus 54 ~~~~e~lA~~~g~~~-------~~i~~g~~~a~~~~~~~l~~-------------~gd~Vl~~~~~h~s~~~~~~~~g~~ 113 (370)
T TIGR02539 54 HDFLEDLAEFLGMDE-------ARVTHGAREGKFAVMHALCK-------------EGDWVVLDGLAHYTSYVAAERAGLN 113 (370)
T ss_pred HHHHHHHHHHhCCCc-------eEEECChHHHHHHHHHHhhC-------------CCCEEEECCcccHHHHHHHHHcCCE
Confidence 355666999999975 66789999999988887753 2368999999999888888999999
Q ss_pred eEEEeccC-CccccCHHHHHHHhhh-------CCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeeccccc
Q 014163 178 LKEVKLEE-GYYVMNPVKAVELVDE-------NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (429)
Q Consensus 178 v~~v~~~~-~~~~~d~~~l~~~i~~-------~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~ 249 (429)
++.+|.++ +++.+|+++|++++++ ++++|++++++|++|.+.|+++|+++|+++ ++++++|+||+.
T Consensus 114 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~------~~~livDea~~~ 187 (370)
T TIGR02539 114 VKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREK------GVPLLLNCAYTV 187 (370)
T ss_pred EEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHc------CCeEEEECcccc
Confidence 99999863 3478999999999974 678999999999999999999999999999 999999999986
Q ss_pred ccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHH
Q 014163 250 FIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQY 329 (429)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~ 329 (429)
+..+. +....++|+++.++||+++++.++|+++.++ +.. +.+.....+..-.... .+.++.......+++
T Consensus 188 g~~~~-------~~~~~~~di~v~s~sK~~~~~g~~G~l~~~~-~~i-~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 257 (370)
T TIGR02539 188 GRMPV-------SAKEIGADFIVGSGHKSMAASGPCGVLGMSE-EWE-DIVLRKSRYSPVKEVE-LLGCTSRGAPIVTMM 257 (370)
T ss_pred CCcCC-------CHHHcCCCEEEeeCcccccCCCCEEEEEECH-HHH-hhhcccccCCccceee-eecccccccHHHHHH
Confidence 43211 1111258999999999998777889988754 222 2222222211111100 111233223444455
Q ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeC-CCCceEEEEEecCCC------CCCHHHHHHHHHHHHhcc
Q 014163 330 YQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSK-DVGVPLVAFSLKDSS------AHTVFEISEGLRKKLNRF 402 (429)
Q Consensus 330 ~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~~~v~f~~~~~~------~~~~~~~~~~L~~~l~~~ 402 (429)
+++... .+.+++ ..+..++++++++.|++++ ++++.. +...+++.++++... ..+...+.+.|. ++
T Consensus 258 ~al~~~-~~~l~~-~~~~~~~~~~l~~~L~~~g-~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~----e~ 330 (370)
T TIGR02539 258 ASFPHV-VERVKR-WDEEVKKTRWFVAELEDIG-FIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEELK----KR 330 (370)
T ss_pred HHHHHH-HHHHHH-HHHHHHHHHHHHHHHHhCC-cEEEccCCCcCceEEEECCchhHHhhhhccccHHHHHHHH----hC
Confidence 555322 222222 3344555679999999987 887532 336788888763210 012234555665 99
Q ss_pred Cce-ecccCCCCCCCceEEEEEe
Q 014163 403 QVV-YPQKLPMSYPWSTKLRVIS 424 (429)
Q Consensus 403 G~~-~~~~~~~~~~~~~~lRi~~ 424 (429)
||. ++. ....++|+++
T Consensus 331 GI~~ir~------~~~~~iRis~ 347 (370)
T TIGR02539 331 GIHGIRS------GQTKYFKLSV 347 (370)
T ss_pred CCccccC------CcceEEEEEe
Confidence 996 431 1134799998
No 76
>PRK07337 aminotransferase; Validated
Probab=99.93 E-value=5.5e-23 Score=201.95 Aligned_cols=328 Identities=15% Similarity=0.042 Sum_probs=218.9
Q ss_pred CCCccccccccCCC-hHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHH
Q 014163 55 NPRLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLA 133 (429)
Q Consensus 55 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~a 133 (429)
+..++|..+.++++ ++.+.+++..++..+...|....+..++++.+.+++.+.+|.+.+. ...++|+|+++|+.++
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~---~~i~~t~G~~~al~~~ 106 (388)
T PRK07337 30 RDIIHMGIGEPDFTAPEPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVAP---ERIVVTAGASAALLLA 106 (388)
T ss_pred CCEEEeCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCh---HhEEEecCcHHHHHHH
Confidence 34455677776653 4567788777776554556556678899999999998888875432 2378999999999988
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccC-CccccCHHHHHHHhhhCCeEEEEeeCC
Q 014163 134 GLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGS 212 (429)
Q Consensus 134 l~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~~~ 212 (429)
+.++.+ .+++|++++++|..+...++..|++++.+|+++ +++.+|++++++.+++++++|++++|+
T Consensus 107 ~~~l~~-------------~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~ 173 (388)
T PRK07337 107 CLALVE-------------RGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEAAWGERTRGVLLASPS 173 (388)
T ss_pred HHHhcC-------------CCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHhhcCccceEEEEECCC
Confidence 887654 236899999999999998899999999999874 347899999999999999999999999
Q ss_pred CccccccC---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEE-EEcCcccC-CCCCCeEE
Q 014163 213 TLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSI-NVSGHKYG-LVYAGVGW 287 (429)
Q Consensus 213 ~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~-~~s~hK~~-~~p~g~g~ 287 (429)
||||.+.+ +++|+++|+++ ++++++|++|..+.. .+.. ........+++ ..|..|.+ +++.++||
T Consensus 174 NPtG~~~~~~~~~~i~~~a~~~------~~~ii~De~y~~~~~---~~~~-~~~~~~~~~vi~~~S~SK~~~~~G~RiG~ 243 (388)
T PRK07337 174 NPTGTSIAPDELRRIVEAVRAR------GGFTIVDEIYQGLSY---DAAP-VSALSLGDDVITINSFSKYFNMTGWRLGW 243 (388)
T ss_pred CCCCcCcCHHHHHHHHHHHHHC------CCEEEEecccccccc---CCCC-cChhhccCCEEEEEechhhcCCchhheee
Confidence 99999854 78889999999 999999999986421 1111 11100112333 34667866 67888999
Q ss_pred EEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCH---HHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 014163 288 VVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF---EGYKNIMENCMGNARALREGLEKTGRF 364 (429)
Q Consensus 288 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~---~g~~~~~~~~~~~~~~l~~~L~~~~~~ 364 (429)
++..++ +.+.+.....+... + ...+.+.+++..+.. +.+++..++..++++++.+.|++.+ +
T Consensus 244 ~~~~~~--l~~~l~~~~~~~~~---------~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~-~ 308 (388)
T PRK07337 244 LVVPEA--LVGTFEKLAQNLFI---------C---ASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESLG-F 308 (388)
T ss_pred eecCHH--HHHHHHHHHHHhcc---------C---CChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhcC-C
Confidence 887432 22222111111110 1 122234444444432 3456667778889999999999875 5
Q ss_pred EEeeCCCCceEEEEEecCC---CCCCHHHHHHHHHHHHhccCceecccC-CCCCCCceEEEEEecc
Q 014163 365 EILSKDVGVPLVAFSLKDS---SAHTVFEISEGLRKKLNRFQVVYPQKL-PMSYPWSTKLRVISHL 426 (429)
Q Consensus 365 ~~~~~~~~~~~v~f~~~~~---~~~~~~~~~~~L~~~l~~~G~~~~~~~-~~~~~~~~~lRi~~~~ 426 (429)
.+...+....++.++++.. +..+..++...|. .++|+.+.+.. .....+..++|+|++.
T Consensus 309 ~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~ll---~~~gv~v~pg~~f~~~~~~~~~Ri~~~~ 371 (388)
T PRK07337 309 KVPVMPDGAFYVYADCRGVAHPAAGDSAALTQAML---HDAGVVLVPGRDFGPHAPRDYIRLSYAT 371 (388)
T ss_pred ccccCCCeeEEEEEecccccCCCCCCHHHHHHHHH---HhCCEEEeCchhhCCCCCCCEEEEEecC
Confidence 4432332344555555421 1245667776643 17899987651 1111234689999975
No 77
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.93 E-value=1.1e-22 Score=199.76 Aligned_cols=330 Identities=16% Similarity=0.034 Sum_probs=219.5
Q ss_pred CCCCCccccccccCCC-hHHHHHHHHHHcCcC-CCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHH
Q 014163 53 DGNPRLNLASFVTTWM-EPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAI 130 (429)
Q Consensus 53 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~ 130 (429)
.+.+.+++..+.++.. ++.+.+++..++... ...|....+..++++.+.+++.+.+|.+.+.. ...++|+|+++++
T Consensus 29 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~--~~ii~t~G~~~~i 106 (385)
T PRK09276 29 RGVDVISLGIGDPDLPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPE--TEVISLIGSKEGI 106 (385)
T ss_pred cCCCEEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCC--CcEEEccCcHHHH
Confidence 4445566777777653 456788887776542 23454445778899999999988878754321 1267789999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccC-CccccCHHHHHHHhhhCCeEEEEe
Q 014163 131 MLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAI 209 (429)
Q Consensus 131 ~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~ 209 (429)
.+++.++.+ .++.|++++++|+.+...++..|++++.+|+++ +++.+|++++++.+.+++++|+++
T Consensus 107 ~~~~~~~~~-------------~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~l~ 173 (385)
T PRK09276 107 AHIPLAFVN-------------PGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAKKAKLMFIN 173 (385)
T ss_pred HHHHHHhCC-------------CCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEe
Confidence 988887654 236899999999999999999999999999864 347789999999998889999999
Q ss_pred eCCCccccccC---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCc--ccc-CCCCeeEEEEcCcccC-CCC
Q 014163 210 LGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE--WDF-RLPLVKSINVSGHKYG-LVY 282 (429)
Q Consensus 210 ~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~-~~~~~d~~~~s~hK~~-~~p 282 (429)
+|+||||.+-+ +++|+++|++| ++++++|++|+.+.. ...... ..+ .......+..+.-|.+ .++
T Consensus 174 ~p~NPtG~~~~~~~~~~l~~~~~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G 245 (385)
T PRK09276 174 YPNNPTGAVADLEFFEEVVDFAKKY------DIIVCHDAAYSEIAY--DGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTG 245 (385)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHC------CcEEEEecchhheec--CCCCCCChhccCCCcCCEEEEecchhhcCCcc
Confidence 99999999966 58889999999 999999999986431 110010 011 1112234444555765 677
Q ss_pred CCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHHHHHHHh
Q 014163 283 AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG--FEGYKNIMENCMGNARALREGLEK 360 (429)
Q Consensus 283 ~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~--~~g~~~~~~~~~~~~~~l~~~L~~ 360 (429)
.++||++.. ++ +.+.+.....+... +. ....+.++...+. ...+++..++..++++++.+.|++
T Consensus 246 lRiG~~i~~-~~-l~~~~~~~~~~~~~--------~~----~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~ 311 (385)
T PRK09276 246 WRIGFAVGN-AD-LIAGLGKVKSNVDS--------GV----FQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRK 311 (385)
T ss_pred hhheeeeCC-HH-HHHHHHHHHhhccC--------CC----CHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 889998753 22 22222211111110 11 1123334444442 344567777888899999999998
Q ss_pred CCCeEEeeCCCCceE-EEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 361 TGRFEILSKDVGVPL-VAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 361 ~~~~~~~~~~~~~~~-v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
.+ +++..+ ..++ +.+++++ ..+..++.+.|.+ ++|+.+.+.......+..++||+++.+
T Consensus 312 ~~-~~~~~~--~~~~~~~v~~~~--~~~~~~l~~~ll~---~~gi~v~~g~~f~~~~~~~~Ris~~~~ 371 (385)
T PRK09276 312 LG-LEVEPP--KATFYVWAPVPK--GYTSAEFATLLLD---KAGVVVTPGNGFGEYGEGYFRIALTVP 371 (385)
T ss_pred CC-CcccCC--CcceEEEEECCC--CCCHHHHHHHHHH---hCCEEECCchhhCCCCCCeEEEEeCCC
Confidence 84 766543 3444 4555532 4567777777651 579998765211222345799999753
No 78
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.92 E-value=6.6e-23 Score=198.57 Aligned_cols=321 Identities=16% Similarity=0.041 Sum_probs=213.4
Q ss_pred ccccccCCC-hHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHH
Q 014163 60 LASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFK 138 (429)
Q Consensus 60 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~ 138 (429)
|..+.|..+ ++.+.+++.+... ....|....+..++++.+.+++.+.+|++.+.. ..+++|+|+++++..++.+++
T Consensus 5 ~~~g~p~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~--~~Iiit~Gs~~ai~~~~~~~~ 81 (350)
T TIGR03537 5 FGTGDPKEPTPPFIRKALIDAVP-EVSQYPSALGTKALREAISGWFERRFGVKLDPD--AQVLPSAGSKEAIFHFPLVFI 81 (350)
T ss_pred ccCCCCCCCCCHHHHHHHHHHHh-ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--CcEEEcCChHHHHHHHHHHHc
Confidence 444555444 5667777776644 333455556788999999999988888754321 138899999999998888775
Q ss_pred HHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEecc-CCccccCHHHHHHHhhhCCeEEEEeeCCCcccc
Q 014163 139 RKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVMNPVKAVELVDENTICVAAILGSTLTGE 217 (429)
Q Consensus 139 ~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~-~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~ 217 (429)
+. | ..+++|+++.++|..+..+++..|++++.++++ ++++.+|++++++++.++++++++++++||||.
T Consensus 82 ~~--------g--~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~ 151 (350)
T TIGR03537 82 DP--------E--EDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGA 151 (350)
T ss_pred CC--------C--CCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeCCCCCcCc
Confidence 41 1 012589999999999999999999999999986 444779999999999999999999999999999
Q ss_pred ccC---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCc-cccCCCCeeEEEEcCcccC-CCCCCeEEEEEeC
Q 014163 218 FED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDFRLPLVKSINVSGHKYG-LVYAGVGWVVWRT 292 (429)
Q Consensus 218 ~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~~~~~d~~~~s~hK~~-~~p~g~g~l~~~~ 292 (429)
+.+ +++|+++|+++ ++++++|++|+.+.. ..+... ..+..+++ .+..+..|.+ .++.++|+++. +
T Consensus 152 ~~~~~~~~~l~~~a~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~-i~~~s~SK~~g~~GlRiG~~~~-~ 221 (350)
T TIGR03537 152 TAPRSYLKETIAMCREH------GIILCSDECYTEIYF--GEPPHSALEVGIENV-LAFHSLSKRSGMTGYRSGFVAG-D 221 (350)
T ss_pred ccCHHHHHHHHHHHHHc------CcEEEEecccccccc--CCCCCchhhcCcCCE-EEEeecccccCCccccceeeec-C
Confidence 877 88999999999 999999999986421 111100 01111222 4444677864 67888999874 2
Q ss_pred CCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC
Q 014163 293 KDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-FEGYKNIMENCMGNARALREGLEKTGRFEILSKDV 371 (429)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~-~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 371 (429)
+. +...+.....+... ++. .+.+.++...+. .+.+++..++..++++.+.+.|++.+ +++. ++
T Consensus 222 ~~-~~~~~~~~~~~~~~--------~~~----~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~~g-~~~~-~~- 285 (350)
T TIGR03537 222 EK-LISFLRKLRANFGV--------ASP----DFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNKVG-LEYL-YP- 285 (350)
T ss_pred HH-HHHHHHHHHHhhcc--------CCC----HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHCC-Cccc-CC-
Confidence 22 22222211111110 111 112222323332 33456677778888999999999875 6655 33
Q ss_pred CceEE-EEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEec
Q 014163 372 GVPLV-AFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 372 ~~~~v-~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
..+.+ .+++++ ..+..++.+.|. ++|+.+.........+..++|++++
T Consensus 286 ~g~~~~~~~~~~--~~~~~~l~~~L~----~~gv~v~~g~~f~~~~~~~~Ri~~~ 334 (350)
T TIGR03537 286 DATFYLWVKVPS--GIDAKDYALRLL----ENGIVVAPGENFGSGEEGYVRVALV 334 (350)
T ss_pred CeEEEEEEECCC--CCCHHHHHHHHH----HCCEEEcCchhhCCCCCCEEEEEec
Confidence 34543 344432 356677777777 8999987652222233457999985
No 79
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.92 E-value=9.4e-23 Score=200.81 Aligned_cols=329 Identities=12% Similarity=0.046 Sum_probs=221.3
Q ss_pred CCCCccccccccCCC-hHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHH
Q 014163 54 GNPRLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIML 132 (429)
Q Consensus 54 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~ 132 (429)
+.+.++|..+.|..+ ++.+.+++.+.+......|....+...+++.+.+++.+.+|...+. ...++|+|+++|+..
T Consensus 30 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~---~~i~~~~g~~~a~~~ 106 (393)
T PRK05764 30 GRDVISLGAGEPDFDTPEHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYDP---SQVIVTTGAKQALYN 106 (393)
T ss_pred cCCEEEeCCCCCCCCCCHHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCCH---HHEEEeCCcHHHHHH
Confidence 334456777777655 4567888877776544456666678899999988888877754321 238899999999998
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccC-CccccCHHHHHHHhhhCCeEEEEeeC
Q 014163 133 AGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILG 211 (429)
Q Consensus 133 al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~~ 211 (429)
++.++.+ .++.|++++++|..+..+++..|++++.++.++ +++.+|++++++++++++++|+++++
T Consensus 107 ~~~~~~~-------------~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p 173 (393)
T PRK05764 107 AFMALLD-------------PGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQLEAAITPKTKALILNSP 173 (393)
T ss_pred HHHHhcC-------------CCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHHHHhhCccceEEEEECC
Confidence 8887654 135899999999999999999999999999873 34789999999999888999999999
Q ss_pred CCcccccc---ChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCC-c-ccc--CCCCeeEEEEcCcccCC-CCC
Q 014163 212 STLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-E-WDF--RLPLVKSINVSGHKYGL-VYA 283 (429)
Q Consensus 212 ~~~tG~~~---~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~-~~~--~~~~~d~~~~s~hK~~~-~p~ 283 (429)
+||||.+. ++++|+++|++| ++++++|++|+.+.. ..... . ..+ ....-+.+..+..|.++ ++.
T Consensus 174 ~NPtG~~~~~~~~~~l~~~a~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~ 245 (393)
T PRK05764 174 SNPTGAVYSPEELEAIADVAVEH------DIWVLSDEIYEKLVY--DGAEFTSIASLSPELRDRTITVNGFSKAYAMTGW 245 (393)
T ss_pred CCCCCcccCHHHHHHHHHHHHHC------CcEEEEeccccceee--CCCCcccHHHcCCCCcCCEEEEecCcccccCccc
Confidence 99999984 588999999999 999999999986432 11110 0 011 11234566667778765 667
Q ss_pred CeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHHHHHHHhC
Q 014163 284 GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG--FEGYKNIMENCMGNARALREGLEKT 361 (429)
Q Consensus 284 g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~--~~g~~~~~~~~~~~~~~l~~~L~~~ 361 (429)
++|+++.+ ++ +...+........ .. ...+.++++...+. .+.+++..++..++++++.+.|+++
T Consensus 246 RiG~i~~~-~~-~~~~~~~~~~~~~---------~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 311 (393)
T PRK05764 246 RLGYAAGP-KE-LIKAMSKLQSHST---------SN---PTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEI 311 (393)
T ss_pred eeEEEecC-HH-HHHHHHHHHhhcc---------cC---CChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 79998753 22 2222211111000 01 12334455554442 4556677777888899999999998
Q ss_pred CCeEEeeCCCCceE-EEEEecCCC---CCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 362 GRFEILSKDVGVPL-VAFSLKDSS---AHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 362 ~~~~~~~~~~~~~~-v~f~~~~~~---~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
+++.+..+ ..+. +.+.+.+.. +.+..++.+.|.+ ++|+.+.+...... ..++|++++.+
T Consensus 312 ~g~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~gi~v~~g~~f~~--~~~vRis~~~~ 374 (393)
T PRK05764 312 PGLECPKP--EGAFYVFPNVSKLLGKSITDSLEFAEALLE---EAGVAVVPGIAFGA--PGYVRLSYATS 374 (393)
T ss_pred CCCcccCC--CcceEEEEecccccccccCCHHHHHHHHHH---hCCEEEccccccCC--CCEEEEEecCC
Confidence 66876643 3443 333443210 1134677666541 57999876421111 46799998753
No 80
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.92 E-value=3e-23 Score=219.59 Aligned_cols=307 Identities=15% Similarity=0.068 Sum_probs=213.3
Q ss_pred HHHHHHHHHcCc---CCCC-CccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 71 ECDKLVMASINK---NYVD-MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 71 ~~~~~~~~~~~~---~~~~-~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
.+.+++..++.. |.+. +..+....++.+++++.+++++|++++. ..++||+|+|+|++++...+..+
T Consensus 50 ~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~---~~VvFtsnaT~alnlva~~l~~~------ 120 (805)
T PLN02724 50 QLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSD---YACVFTSGATAALKLVGETFPWS------ 120 (805)
T ss_pred HHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccc---eEEEEeCChHHHHHHHHHHCCCC------
Confidence 455555444332 3322 2234455666779999999999996531 23799999999999876654210
Q ss_pred hcCCCCCCcEEEEcCCCchHH---HHHHHhcCceeEEEeccC-------CccccCH--HHHHHHhh----------hCCe
Q 014163 147 EQGKPYDKPNIVTGANVQVCW---EKFARYFEVELKEVKLEE-------GYYVMNP--VKAVELVD----------ENTI 204 (429)
Q Consensus 147 ~~g~~~~~~~vi~~~~~h~s~---~~~~~~~G~~v~~v~~~~-------~~~~~d~--~~l~~~i~----------~~~~ 204 (429)
.+++|+++...|.+. ...++..|++++.++++. +.+.+++ ++|++.++ ++|+
T Consensus 121 ------~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~ 194 (805)
T PLN02724 121 ------SESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYN 194 (805)
T ss_pred ------CCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhccccccCCCcc
Confidence 135899998899763 344556799999998761 1234544 66777642 3568
Q ss_pred EEEEeeCCCccccccChHHHHHHHHHhhhcc---CCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCC
Q 014163 205 CVAAILGSTLTGEFEDVKLLHDLLTKKNEET---GWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLV 281 (429)
Q Consensus 205 ~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~---~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~ 281 (429)
+|++++.+|.+|.+.|++.|..+++... ++ +.+++++||+||+.+.. +.++...++|++++|+|||+++
T Consensus 195 LVa~~~vsN~tG~i~pi~~i~~~~~~~~-~~~~~~g~~~v~vDaaQ~~g~~-------piDv~~~~~Dfl~~S~HK~~Gg 266 (805)
T PLN02724 195 LFAFPSECNFSGAKFPLDLVKLIKDNQH-SNFSKSGRWMVLLDAAKGCGTS-------PPDLSRYPADFVVVSFYKIFGY 266 (805)
T ss_pred eEEEEccccCCCCcCCHHHHHHHHHhcc-cccccCcceEEEeehhhhcCCC-------CCChhhcCCCEEEEecceeccC
Confidence 9999999999999999998765555320 00 00357999999986544 3344445799999999999988
Q ss_pred CCCeEEEEEeCCCCcccccccccCCCCCCC------------------CCceeccCCchhHHHHHHHHHHHcCHHHHHHH
Q 014163 282 YAGVGWVVWRTKDDLPDELVFHINYLGSDQ------------------PTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNI 343 (429)
Q Consensus 282 p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~ 343 (429)
|.|+|+++++++ .+ .. ..+.+.++.. ..+ -.||++...++++.++++.+...|++++
T Consensus 267 P~G~G~L~vr~~-~~-~~--l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rf-E~GT~n~~~i~~l~aal~~l~~ig~~~I 341 (805)
T PLN02724 267 PTGLGALLVRRD-AA-KL--LKKKYFGGGTVAASIADIDFVKRRERVEQRF-EDGTISFLSIAALRHGFKLLNRLTISAI 341 (805)
T ss_pred CCCceEEEEehh-hh-hh--hcCCccCCCceEEEecccceeeccccHHHHh-cCCCcchhHHHHHHHHHHHHHHhChHHH
Confidence 999999999864 22 11 1222332211 011 1489988889999999999888889999
Q ss_pred HHHHHHHHHHHHHHHHhCC------CeEEeeCC-------CCceEEEEEecCCC--CCCHHHHHHHHHHHHhccCceecc
Q 014163 344 MENCMGNARALREGLEKTG------RFEILSKD-------VGVPLVAFSLKDSS--AHTVFEISEGLRKKLNRFQVVYPQ 408 (429)
Q Consensus 344 ~~~~~~~~~~l~~~L~~~~------~~~~~~~~-------~~~~~v~f~~~~~~--~~~~~~~~~~L~~~l~~~G~~~~~ 408 (429)
.++..++++++.+.|++++ +++++++. .+.++++|.+.+.. .+...++...+. ++||.+++
T Consensus 342 ~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~v~~~~v~~l~~----~~gI~vR~ 417 (805)
T PLN02724 342 AMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSWVGHREVEKLAS----LSGIQLRT 417 (805)
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCEeCHHHHHHHHH----hcCcEEee
Confidence 9999999999999999986 47888643 25789999997632 244555555545 77999877
Q ss_pred c
Q 014163 409 K 409 (429)
Q Consensus 409 ~ 409 (429)
.
T Consensus 418 G 418 (805)
T PLN02724 418 G 418 (805)
T ss_pred c
Confidence 5
No 81
>PRK08068 transaminase; Reviewed
Probab=99.92 E-value=1e-22 Score=200.06 Aligned_cols=326 Identities=10% Similarity=-0.033 Sum_probs=218.9
Q ss_pred CCCccccccccCCC-hHHHHHHHHHHcCcC-CCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHH
Q 014163 55 NPRLNLASFVTTWM-EPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIML 132 (429)
Q Consensus 55 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~ 132 (429)
+..++|+.+.|+.+ +|.+.+.+...++.. ...|...++..++++++.+++.+.+|.+.+.. ..+++|+|+++++..
T Consensus 32 ~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~--~~i~it~G~~~~l~~ 109 (389)
T PRK08068 32 HDVINLGQGNPDQPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLDPE--TEVAILFGGKAGLVE 109 (389)
T ss_pred CCeEEecCCCCCCCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--ccEEEcCCcHHHHHH
Confidence 34466777777654 356777777776543 23455567889999999999887778654321 137899999999988
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccC-CccccCHHHHHHHhhhCCeEEEEeeC
Q 014163 133 AGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILG 211 (429)
Q Consensus 133 al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~~ 211 (429)
++.++.. .++.|+++.++|..+..+++..|++++.+|+++ +++.+|++++++.+.+++++|++++|
T Consensus 110 ~~~~~~~-------------~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P 176 (389)
T PRK08068 110 LPQCLMN-------------PGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTKIPEEVAEKAKLMYLNYP 176 (389)
T ss_pred HHHHhCC-------------CCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHHHHHhccccceEEEEECC
Confidence 7777644 236899999999999999999999999999974 34789999999999888999999999
Q ss_pred CCccccccCh---HHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcccc----CCCCeeEEEEcCcccC-CCCC
Q 014163 212 STLTGEFEDV---KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF----RLPLVKSINVSGHKYG-LVYA 283 (429)
Q Consensus 212 ~~~tG~~~~l---~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~----~~~~~d~~~~s~hK~~-~~p~ 283 (429)
+||||.+-+. ++|.++|+++ ++++++|++|+.+.. .......+ +...-..+..|.-|.+ .++.
T Consensus 177 ~NPTG~~~s~~~~~~l~~la~~~------~~~ii~Deay~~~~~---~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~Gl 247 (389)
T PRK08068 177 NNPTGAVATKAFFEETVAFAKKH------NIGVVHDFAYGAIGF---DGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGW 247 (389)
T ss_pred CCCCCCcCCHHHHHHHHHHHHHc------CeEEEEehhhhhhcc---CCCCCcChhhCCCccCCEEEEecchhccCCccc
Confidence 9999999655 6788899999 999999999976321 11110011 1111234445666765 6889
Q ss_pred CeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHc--CHHHHHHHHHHHHHHHHHHHHHHHhC
Q 014163 284 GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEGYKNIMENCMGNARALREGLEKT 361 (429)
Q Consensus 284 g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l--~~~g~~~~~~~~~~~~~~l~~~L~~~ 361 (429)
++||++.. ++ +...+......... ++. ...+.++...+ +...+++..++..++++++.+.|+++
T Consensus 248 RiG~~~~~-~~-l~~~l~~~~~~~~~--------~~~----~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~ 313 (389)
T PRK08068 248 RVAFAVGN-ES-VIEAINLLQDHLFV--------SLF----GAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREI 313 (389)
T ss_pred eeEeEecC-HH-HHHHHHHHHhhccC--------CCC----hHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 99998753 32 22222111111100 111 11233333333 23556777888889999999999988
Q ss_pred CCeEEeeCCCCceE-EEEEecCCCCCCHHHHHHHHHHHHhc-cCceecccCCCCCCCceEEEEEeccc
Q 014163 362 GRFEILSKDVGVPL-VAFSLKDSSAHTVFEISEGLRKKLNR-FQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 362 ~~~~~~~~~~~~~~-v~f~~~~~~~~~~~~~~~~L~~~l~~-~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
+ +.+. ++ ..++ +.+.+++ ..+..++.+.|. + +|+.+.+.......+..++|++++.+
T Consensus 314 g-~~~~-~~-~g~~~~~v~~~~--~~~~~~~~~~l~----~~~gi~v~pg~~f~~~~~~~iRi~~~~~ 372 (389)
T PRK08068 314 G-WEVD-AP-KGSFFAWMPVPK--GYTSEQFADLLL----EKAHVAVAPGNGFGEHGEGYVRVGLLTD 372 (389)
T ss_pred C-Cccc-CC-CeeEEEEEECCC--CCCHHHHHHHHH----HhCCEEEecchHhCccCCCeEEEEEcCC
Confidence 5 6644 33 4454 4555543 356778888877 5 69998765211223456799999754
No 82
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.92 E-value=1.2e-22 Score=199.56 Aligned_cols=326 Identities=14% Similarity=0.123 Sum_probs=214.7
Q ss_pred CCccccccccCCC-hHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHH
Q 014163 56 PRLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (429)
Q Consensus 56 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al 134 (429)
+.+++..+.++.. ++.+.+++..++......|....+..++++.+.+++.+.+|.+.+.. ..+++|+|+++|+.+++
T Consensus 31 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~--~~i~it~G~~~al~~~~ 108 (391)
T PRK07309 31 GILKLTLGEPDFTTPDHVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAPE--NEILVTIGATEALSASL 108 (391)
T ss_pred CeEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCC--CcEEEeCChHHHHHHHH
Confidence 3456666666643 45577777766654433455556788999999999988788753221 23889999999999988
Q ss_pred HHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhh---CCeEEEEeeC
Q 014163 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILG 211 (429)
Q Consensus 135 ~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~---~~~~v~~~~~ 211 (429)
.++.. .+++|++++++|..+..+++..|++++.+|.+++++.+|++.|+++++. ++++|++++|
T Consensus 109 ~~~~~-------------~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P 175 (391)
T PRK07309 109 TAILE-------------PGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYP 175 (391)
T ss_pred HHhcC-------------CCCEEEEeCCCCcchHHHHHHcCCEEEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEEECC
Confidence 87643 2368999999999999999999999999998765578999999999874 5789999999
Q ss_pred CCcccccc---ChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcccc---CCCCeeEEEEcCcccC-CCCCC
Q 014163 212 STLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF---RLPLVKSINVSGHKYG-LVYAG 284 (429)
Q Consensus 212 ~~~tG~~~---~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~---~~~~~d~~~~s~hK~~-~~p~g 284 (429)
+||||.+- ++++|+++|++| ++++++|++|+.+.. .. .....+ ..+++ ++..|..|.+ .++.+
T Consensus 176 ~NPtG~~~s~~~~~~l~~~~~~~------~~~ii~D~~y~~~~~--~~-~~~~~~~~~~~~~~-i~~~S~SK~~g~~GlR 245 (391)
T PRK07309 176 ANPTGVTYSREQIKALADVLKKY------DIFVISDEVYSELTY--TG-EPHVSIAEYLPDQT-ILINGLSKSHAMTGWR 245 (391)
T ss_pred CCCCCcCcCHHHHHHHHHHHHHc------CcEEEEEccccceee--CC-CCCCCHHHhccCCE-EEEecChhhccCccce
Confidence 99999974 588999999999 999999999987432 11 111111 11233 4445667765 58889
Q ss_pred eEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCH--HHHHHHHHHHHHHHHHHHHHHHhCC
Q 014163 285 VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF--EGYKNIMENCMGNARALREGLEKTG 362 (429)
Q Consensus 285 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~--~g~~~~~~~~~~~~~~l~~~L~~~~ 362 (429)
+||++... +.+ +.+.....+... + ...+.+.++...+.. .......++..++++++.+.|++.+
T Consensus 246 vG~~v~~~-~~~-~~~~~~~~~~~~--------~----~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 311 (391)
T PRK07309 246 IGLIFAPA-EFT-AQLIKSHQYLVT--------A----ATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDLG 311 (391)
T ss_pred eEEEEeCH-HHH-HHHHHHHhhccc--------C----CChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 99988643 222 222211112111 1 112233344444422 2234455666778889999999885
Q ss_pred CeEEeeCCCCceEEEE-EecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEecc
Q 014163 363 RFEILSKDVGVPLVAF-SLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHL 426 (429)
Q Consensus 363 ~~~~~~~~~~~~~v~f-~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~ 426 (429)
+.+..+ ..+++.| ++++....+..++.++|.+ ++|+.+.+.......+..++|++++.
T Consensus 312 -~~~~~p--~gg~~~~~~l~~~~~~~~~~~~~~l~~---~~gv~v~pg~~f~~~~~~~iRi~~~~ 370 (391)
T PRK07309 312 -FKIIKP--DGAFYIFAKIPAGYNQDSFKFLQDFAR---KKAVAFIPGAAFGPYGEGYVRLSYAA 370 (391)
T ss_pred -CeecCC--CeeEEEEEECCCCCCCCHHHHHHHHHH---hCCEEEeCchhhCCCCCCEEEEEecC
Confidence 766543 3454444 5432112245667765431 68999876522122345689999864
No 83
>PRK07683 aminotransferase A; Validated
Probab=99.92 E-value=1.1e-22 Score=199.48 Aligned_cols=326 Identities=14% Similarity=0.122 Sum_probs=219.9
Q ss_pred CccccccccCCC-hHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHH
Q 014163 57 RLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (429)
Q Consensus 57 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~ 135 (429)
.++|..+.|..+ ++.+.+++.+.+..+...|...++..++++++.+++.+.+|.+.+.. ..+++|+|+++|+.+++.
T Consensus 30 ~i~l~~~~p~~~~~~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~--~~I~~t~G~~~al~~~~~ 107 (387)
T PRK07683 30 LISLTIGQPDFPTPSHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSPE--SEIIVTIGASEAIDIAFR 107 (387)
T ss_pred eEEecCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--CcEEEeCChHHHHHHHHH
Confidence 355677766644 35678888888776555566667889999999999987778754321 138999999999998887
Q ss_pred HHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCcc
Q 014163 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT 215 (429)
Q Consensus 136 a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~t 215 (429)
++.. .++.|+++.++|..+..+++..|++++.++.+++++.+|++++++.++++++++++++++|||
T Consensus 108 ~l~~-------------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~i~~p~NPt 174 (387)
T PRK07683 108 TILE-------------PGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRSTGFRLTAEALENAITEKTRCVVLPYPSNPT 174 (387)
T ss_pred HhCC-------------CCCEEEEcCCCccchHHHHHHcCCEEEEeecCcccCCCCHHHHHHhcCcCceEEEEeCCCCCC
Confidence 7643 236899999999999999999999999999886557889999999999899999999999999
Q ss_pred cccc---ChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCc-ccc-CCCCeeEEEEcCcccCC-CCCCeEEEE
Q 014163 216 GEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDF-RLPLVKSINVSGHKYGL-VYAGVGWVV 289 (429)
Q Consensus 216 G~~~---~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~-~~~~~d~~~~s~hK~~~-~p~g~g~l~ 289 (429)
|.+. ++++|+++|+++ ++++++|++|..+.. ..+... ..+ +...-..+..+.-|.++ ++.++||++
T Consensus 175 G~~~s~~~~~~l~~~~~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~ 246 (387)
T PRK07683 175 GVTLSKEELQDIADVLKDK------NIFVLSDEIYSELVY--EQPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLF 246 (387)
T ss_pred CcCCCHHHHHHHHHHHHHc------CeEEEEeccccccee--CCCcCChhhccCCcCCeEEEeeccccccCccceeEEEE
Confidence 9984 488999999999 999999999986431 111111 111 11122344455666554 889999988
Q ss_pred EeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHc--CHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEe
Q 014163 290 WRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEGYKNIMENCMGNARALREGLEKTGRFEIL 367 (429)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l--~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 367 (429)
... + +.+.+.....+... +. ..+.+.++...+ +...+++..++..++++++.+.|++.+ +.+.
T Consensus 247 ~~~-~-l~~~~~~~~~~~~~--------~~----~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~ 311 (387)
T PRK07683 247 APS-Y-LAKHILKVHQYNVT--------CA----SSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISMG-LDVE 311 (387)
T ss_pred cCH-H-HHHHHHHHHHhccC--------CC----ChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHcC-Cccc
Confidence 643 2 22222211111111 11 112344444334 334456667777889999999998874 6654
Q ss_pred eCCCCceEEEEEecCCCCCCHHHHHHHH-HHHHhccCceecccCCCCCCCceEEEEEecc
Q 014163 368 SKDVGVPLVAFSLKDSSAHTVFEISEGL-RKKLNRFQVVYPQKLPMSYPWSTKLRVISHL 426 (429)
Q Consensus 368 ~~~~~~~~v~f~~~~~~~~~~~~~~~~L-~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~ 426 (429)
. + ..+.+.|...+....+..++...| . ++|+.+.+.......+..++||+++.
T Consensus 312 ~-~-~~~~~~~~~~~~~~~~~~~~~~~ll~----~~gI~v~pg~~f~~~~~~~~Ri~~~~ 365 (387)
T PRK07683 312 K-P-TGAFYLFPSIGHFTMSSFDFALDLVE----EAGLAVVPGSAFSEYGEGYVRLSYAY 365 (387)
T ss_pred C-C-CeeEEEEEecccCCCCHHHHHHHHHH----hCCEEEcCchhhCCCCCCeEEEEecC
Confidence 3 3 456555543322134556676554 4 78999877522122335689999974
No 84
>PLN02721 threonine aldolase
Probab=99.92 E-value=3.4e-23 Score=201.01 Aligned_cols=308 Identities=15% Similarity=0.119 Sum_probs=193.8
Q ss_pred cccccccCCChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHH
Q 014163 59 NLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFK 138 (429)
Q Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~ 138 (429)
+|.+..++.+.+.+.+++... ..+...+...|...++| +.+++++|.+. +.++++||+++..++.+..
T Consensus 9 ~~~~~~~~~~~~~~~~a~~~~-~~~~~~~~~~~~~~~l~----~~la~~~~~~~-------~~~~~~Gs~a~~~~l~~~~ 76 (353)
T PLN02721 9 DLRSDTVTKPTDAMRAAMANA-EVDDDVLGYDPTALRLE----EEMAKIFGKEA-------ALFVPSGTMGNLISVLVHC 76 (353)
T ss_pred hhhcccccCCCHHHHHHHHhc-cCCCcccCCCHHHHHHH----HHHHHHhCCce-------eEEecCccHHHHHHHHHHc
Confidence 345555556667777777653 11111222344455555 45788888764 6788888999887777654
Q ss_pred HHHHHHHHhcCCCCCCcEEEEcCCCchHHHH---HHHhcCceeEEEeccCCccccCHHHHHHHhh-------hCCeEEEE
Q 014163 139 RKWQQKRKEQGKPYDKPNIVTGANVQVCWEK---FARYFEVELKEVKLEEGYYVMNPVKAVELVD-------ENTICVAA 208 (429)
Q Consensus 139 ~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~---~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~-------~~~~~v~~ 208 (429)
.. .+++|++++++|+++.+ .+...|++++.+|.+++ +.+|+++++++++ +++++|++
T Consensus 77 ~~------------~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~i~~~~~~~~~~~~~v~l 143 (353)
T PLN02721 77 DV------------RGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNNED-GTMDLDAIEAAIRPKGDDHFPTTRLICL 143 (353)
T ss_pred cC------------CCCeEEEcCccceehhcccchhhhcCceeEecCCCcC-CCcCHHHHHHHHHhccCCCCCcceEEEE
Confidence 31 13689999999986655 57788999999998764 7899999999998 57888888
Q ss_pred eeC-CCccccccC---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCC
Q 014163 209 ILG-STLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG 284 (429)
Q Consensus 209 ~~~-~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g 284 (429)
+++ +|++|.+.| +++|.++|+++ |+++|+|+||..+... . .....+-...++|+++++.||++.+|.|
T Consensus 144 ~~~~~np~G~~~~~~~l~~l~~l~~~~------g~~livD~a~~~~~~~-~-~~~~~~~~~~~~d~~~~s~sK~l~~~~G 215 (353)
T PLN02721 144 ENTHANCGGRCLSVEYTDKVGELAKRH------GLKLHIDGARIFNASV-A-LGVPVHRLVKAADSVSVCLSKGLGAPVG 215 (353)
T ss_pred eccccccCCccccHHHHHHHHHHHHHc------CCEEEEEchhhhcchh-h-hCCCHHHHhhhCCEEEEecccccCCcee
Confidence 775 667888754 78999999999 9999999998532210 0 0111111123689999999999876644
Q ss_pred eEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCe
Q 014163 285 VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRF 364 (429)
Q Consensus 285 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~ 364 (429)
++++.+++.. ..+........ ++....... ..+++..+ +...+.+++..++++++.+.|++++++
T Consensus 216 --~~~~~~~~~~-~~~~~~~~~~~---------~~~~~~~~~-~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~~ 280 (353)
T PLN02721 216 --SVIVGSKSFI-RKAKRLRKTLG---------GGMRQVGVL-AAAALVAL--QENVPKLEDDHKKAKLLAEGLNQIKGL 280 (353)
T ss_pred --eEEecCHHHH-HhHHHHHHhcC---------CCeehhHHH-HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 3344444332 21111111111 111111111 11222222 112223444567788999999999777
Q ss_pred EE-eeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEec
Q 014163 365 EI-LSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 365 ~~-~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
++ +.++ ..+++.++++...+.+..++.+.|. ++|+.+.+. +..++|++++
T Consensus 281 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~L~----~~gi~v~~~------~~~~lR~~~~ 331 (353)
T PLN02721 281 RVNVAAV-ETNIVYFDITDGSRITAEKLCKSLE----EHGVLLMPG------NSSRIRVVTH 331 (353)
T ss_pred EEecCCc-cceEEEEEccCCccccHHHHHHHHH----hCCcEEecC------CCceEEEEec
Confidence 65 4443 5677777775321245667777777 999998753 2347999986
No 85
>PRK07777 aminotransferase; Validated
Probab=99.92 E-value=1.5e-22 Score=198.84 Aligned_cols=331 Identities=15% Similarity=0.050 Sum_probs=220.8
Q ss_pred CCccccccccCCCh-HHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHH
Q 014163 56 PRLNLASFVTTWME-PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAG 134 (429)
Q Consensus 56 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al 134 (429)
..++|..+.|+... +.+.+.+...+......|...++..++++.+.+++.+.+|.+.+.. ...++|+|+++|+.+++
T Consensus 25 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~--~~i~~t~G~~~al~~~~ 102 (387)
T PRK07777 25 GAVNLGQGFPDEDGPPEMLEAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDPD--TEVLVTVGATEAIAAAV 102 (387)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--CcEEEeCCcHHHHHHHH
Confidence 44667777766433 3456666666655445566667889999999999998889864321 13789999999998888
Q ss_pred HHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCC--ccccCHHHHHHHhhhCCeEEEEeeCC
Q 014163 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG--YYVMNPVKAVELVDENTICVAAILGS 212 (429)
Q Consensus 135 ~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~ 212 (429)
.+... .++.|+++.++|..+..+++..|.+++.++++++ ++.+|+++|++++++++++|++++++
T Consensus 103 ~~~~~-------------~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~ 169 (387)
T PRK07777 103 LGLVE-------------PGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTPRTRALIVNSPH 169 (387)
T ss_pred HHhcC-------------CCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCcccEEEEEcCCC
Confidence 76643 2368999999999999999999999999998643 46799999999999889999999999
Q ss_pred Ccccccc---ChHHHHHHHHHhhhccCCCccEEeecccccccccccCCC-Cccc-c-CCCCeeEEEEcCcccCC-CCCCe
Q 014163 213 TLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD-LEWD-F-RLPLVKSINVSGHKYGL-VYAGV 285 (429)
Q Consensus 213 ~~tG~~~---~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~-~~~~-~-~~~~~d~~~~s~hK~~~-~p~g~ 285 (429)
||||.+. ++++|.++|+++ ++++++|++|+.+.. .... .... + +....+.+..|..|.++ ++.++
T Consensus 170 NPtG~~~~~~~~~~l~~~~~~~------~~~li~De~y~~~~~--~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRi 241 (387)
T PRK07777 170 NPTGTVLTAAELAAIAELAVEH------DLLVITDEVYEHLVF--DGARHLPLATLPGMRERTVTISSAAKTFNVTGWKI 241 (387)
T ss_pred CCCCccCCHHHHHHHHHHHHhc------CcEEEEeccchhccc--CCCCcccHhhCCCCcCcEEEEeechhhccCcCcee
Confidence 9999984 588999999999 999999999986431 1110 0111 1 11235677888999775 67889
Q ss_pred EEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeE
Q 014163 286 GWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFE 365 (429)
Q Consensus 286 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~ 365 (429)
|+++... + +.+.+.....+.... .+. .....+..++. .+...+++..+...++++++.+.|++.+ ++
T Consensus 242 G~~~~~~-~-l~~~~~~~~~~~~~~-------~~~--~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~ 308 (387)
T PRK07777 242 GWACGPA-P-LIAAVRAAKQYLTYV-------GGA--PFQPAVAHALD-HEDAWVAALRDSLQAKRDRLAAGLAEAG-FE 308 (387)
T ss_pred EEEecCH-H-HHHHHHHHHhhcccC-------CCC--HHHHHHHHHHh-CCcHHHHHHHHHHHHHHHHHHHHHHhCC-CC
Confidence 9987643 2 222221111111110 111 11111111221 1334456677888899999999999874 66
Q ss_pred EeeCCCCceEEEE-EecCCCCCCHHHHHHHHHHHHhccCceeccc--CCC-CCCCceEEEEEeccc
Q 014163 366 ILSKDVGVPLVAF-SLKDSSAHTVFEISEGLRKKLNRFQVVYPQK--LPM-SYPWSTKLRVISHLR 427 (429)
Q Consensus 366 ~~~~~~~~~~v~f-~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~--~~~-~~~~~~~lRi~~~~~ 427 (429)
+..+ ..+.+.| ++++....+..++.+.|.+ ++|+.+.+. +.. ...+..++|++++.+
T Consensus 309 ~~~~--~g~~~~~~~~~~~~~~~~~~~~~~l~~---~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~~ 369 (387)
T PRK07777 309 VHDS--AGTYFLCADPRPLGYDDGTEFCRALPE---RVGVAAIPMSVFYDPADAWNHLVRFAFCKR 369 (387)
T ss_pred ccCC--CcceEEEecccccCCCCHHHHHHHHHH---hCCEEEeCchHhCCCCcCCCCeEEEEecCC
Confidence 5533 3444444 5432112356778877752 579988765 221 122346799999753
No 86
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.92 E-value=1.8e-22 Score=201.35 Aligned_cols=315 Identities=15% Similarity=0.086 Sum_probs=209.5
Q ss_pred CChHHHHHHHHHHcCcCC--CC-----CccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEe---CCchHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNY--VD-----MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGT---VGSSEAIMLAGLA 136 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t---~g~t~a~~~al~a 136 (429)
..+|.+.+++...+.+.+ ++ +........+|+.+++.++++||++.+. ..++ ++|++||+.++.+
T Consensus 45 ~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~~-----~~~~~~~~sgt~an~~v~~a 119 (452)
T PTZ00094 45 FTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLDPEE-----WGVNVQPYSGSPANFAVYTA 119 (452)
T ss_pred cCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCCccc-----ceeecCCCchHHHHHHHHHH
Confidence 456778888877775443 11 1222356778877899999999997531 3344 7899999998888
Q ss_pred HHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHh----------cCceeEEEeccCCccccCHHHHHHHhhh-CCeE
Q 014163 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARY----------FEVELKEVKLEEGYYVMNPVKAVELVDE-NTIC 205 (429)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~----------~G~~v~~v~~~~~~~~~d~~~l~~~i~~-~~~~ 205 (429)
+.. .++.|++++..|.+....+.. .++++..++++.+ +.+|+++|++++++ ++++
T Consensus 120 l~~-------------~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~~-g~id~~~L~~~l~~~~~~l 185 (452)
T PTZ00094 120 LLQ-------------PHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNEK-GLIDYDKLEELAKAFRPKL 185 (452)
T ss_pred hcC-------------CCCEEEecccccCCcccccccccccccccceeeeeeeecccCCC-CCcCHHHHHHHHHHhCCCE
Confidence 743 136899988888765433211 1233445556654 78999999999965 5666
Q ss_pred EEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCe
Q 014163 206 VAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGV 285 (429)
Q Consensus 206 v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~ 285 (429)
|++. .+.+|...|+++|+++|+++ |+++|||++|+.+..+... .+. ...++|++++++|||+++|.|
T Consensus 186 vi~~--~s~~g~~~di~~I~~i~~~~------ga~l~vDaaq~~G~i~~~~--~~~--~~~~~D~l~~S~hK~l~GP~G- 252 (452)
T PTZ00094 186 IIAG--ASAYPRDIDYKRFREICDSV------GAYLMADIAHTSGLVAAGV--LPS--PFPYADVVTTTTHKSLRGPRS- 252 (452)
T ss_pred EEEe--CCCCCCccCHHHHHHHHHHc------CCEEEEeccchhccccCCC--CCC--CCCCCcEEEcCCccCCCCCCc-
Confidence 6543 44689999999999999999 9999999999876543211 111 123799999999999999998
Q ss_pred EEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeE
Q 014163 286 GWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFE 365 (429)
Q Consensus 286 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~ 365 (429)
|++++++. .. ..+.. ..... ....+.|+.+...++++.++++.+...+++++.++..+++++|.+.|++. +++
T Consensus 253 g~l~~~~~-~~-~~l~~---~~~~~-~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~-g~~ 325 (452)
T PTZ00094 253 GLIFYRKK-VK-PDIEN---KINEA-VFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR-GYD 325 (452)
T ss_pred eEEEEecc-cc-hHHHH---hhccc-cCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC-CcE
Confidence 77777643 21 11100 00000 00112356666677888888888866677888999999999999999887 488
Q ss_pred EeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceeccc-CCCC--CCCceEEEEEec
Q 014163 366 ILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK-LPMS--YPWSTKLRVISH 425 (429)
Q Consensus 366 ~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~-~~~~--~~~~~~lRi~~~ 425 (429)
+..+.....++.+.+.. .+.+..++...|. ++||.+... .|.. ......+|++++
T Consensus 326 v~~~~~~~~~~~v~~~~-~~~~~~~~~~~L~----~~gI~vs~~~~p~~~~~~~~~~vRis~~ 383 (452)
T PTZ00094 326 LVTGGTDNHLVLVDLRP-FGITGSKMEKLLD----AVNISVNKNTIPGDKSALNPSGVRLGTP 383 (452)
T ss_pred EecCCCCCceEeecCCc-CCCCHHHHHHHHH----HCCcEEecccCCCCCcCCCCCeEEECCH
Confidence 87532112333333321 2456677777777 889998532 2211 122357999874
No 87
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.92 E-value=2.5e-22 Score=197.86 Aligned_cols=324 Identities=13% Similarity=0.052 Sum_probs=215.9
Q ss_pred CCCCccccccccCCC-hHHHHHHHHHHcCcC-CCCCccChhhHHHHHHHHHHHHHhhCCC-CCCCCCCCceEeCCchHHH
Q 014163 54 GNPRLNLASFVTTWM-EPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTP-VADDKTAVGVGTVGSSEAI 130 (429)
Q Consensus 54 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~-~~~~~~~~~~~t~g~t~a~ 130 (429)
+++.++|..+.+... ++.+.+.+...+... ...|. ..+..++++.+.+++.+.+|.+ .+.. ..+++|+|+++++
T Consensus 43 ~~~~i~L~~g~p~~~~~~~~~~~l~~~~~~~~~~~Y~-~~G~~~lr~aia~~~~~~~g~~~~~~~--~~I~it~Gs~~al 119 (410)
T PRK06290 43 DMELIDMGVGEPDEMADESVVEVLCEEAKKPENRGYA-DNGIQEFKEAAARYMEKVFGVKDIDPV--TEVIHSIGSKPAL 119 (410)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCCCCCC-CCCcHHHHHHHHHHHHHHcCCCcCCCc--ceEEEccCHHHHH
Confidence 445577888877654 455677666554322 22243 3678899999999998888865 3221 1388999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccC-CccccCHHHHHHHhhhCCeEEEEe
Q 014163 131 MLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAI 209 (429)
Q Consensus 131 ~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~ 209 (429)
.+++.++.+ .++.|+++.++|..+...++..|+++..+|+++ +++.+|++++++++.+++++|+++
T Consensus 120 ~~~~~~~~~-------------~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~ 186 (410)
T PRK06290 120 AMLPSCFIN-------------PGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLN 186 (410)
T ss_pred HHHHHHhCC-------------CCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccceEEEEE
Confidence 888887754 236899999999999999999999999999974 347889999999998889999999
Q ss_pred eCCCccccccC---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCc-ccc-CCCCeeEEEEcCcccC-CCCC
Q 014163 210 LGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDF-RLPLVKSINVSGHKYG-LVYA 283 (429)
Q Consensus 210 ~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~-~~~~~d~~~~s~hK~~-~~p~ 283 (429)
+|+||||.+-+ +++|.++|++| +++|++|++|+.+.. ...... ..+ .....+.+..|.-|.+ +++.
T Consensus 187 nP~NPTG~v~s~e~l~~l~~la~~~------~~~iI~DEaY~~~~~--~~~~~s~~~~~~~~~~~I~i~SfSK~~g~~Gl 258 (410)
T PRK06290 187 YPNNPTGAVATKEFYEEVVDFAKEN------NIIVVQDAAYAALTF--DGKPLSFLSVPGAKEVGVEIHSLSKAYNMTGW 258 (410)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHc------CeEEEEecchhhcee--CCCCcChhcCCCccccEEEEeechhhcCCchh
Confidence 99999999966 67888889999 999999999987431 110000 011 1123445666667765 7889
Q ss_pred CeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHHHHHHhCC
Q 014163 284 GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF-EGYKNIMENCMGNARALREGLEKTG 362 (429)
Q Consensus 284 g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~-~g~~~~~~~~~~~~~~l~~~L~~~~ 362 (429)
++||++.. ++.. ..+.....+... + ...+.+.++...+.. +.+++..++..++++++.+.|++.+
T Consensus 259 RiG~ii~~-~~l~-~~l~~~~~~~~~--------~----~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g 324 (410)
T PRK06290 259 RLAFVVGN-ELIV-KAFATVKDNNDS--------G----QFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNEVG 324 (410)
T ss_pred heEeEEeC-HHHH-HHHHHHHhcccc--------C----CcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99998863 2222 222111111110 1 112334444444432 3356677788889999999999985
Q ss_pred CeEEeeCCCCceEEEE-EecCCC-----CCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEec
Q 014163 363 RFEILSKDVGVPLVAF-SLKDSS-----AHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 363 ~~~~~~~~~~~~~v~f-~~~~~~-----~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
+.+.. + ..+++.| ++++.. ..+..++.+.|. ++|+++.. |.... ..++||+++
T Consensus 325 -~~~~~-p-~g~f~l~v~lp~~~~~~~~~~~~~~~~~~Ll----~~~~v~~~--p~~~~-~~~lRi~~~ 383 (410)
T PRK06290 325 -FKAEM-P-GGTFYLYVKAPKGTKSGIKFENAEEFSQYLI----KEKLISTV--PWDDA-GHFLRFSVT 383 (410)
T ss_pred -CeecC-C-CeeeEEEEECCCccccCCCCCCHHHHHHHHH----HhCCEEEE--CCccc-cCeEEEEEE
Confidence 76553 3 4566655 554210 025667777777 77755431 21111 247999997
No 88
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.92 E-value=1.9e-22 Score=199.18 Aligned_cols=336 Identities=14% Similarity=0.071 Sum_probs=212.5
Q ss_pred HHHHHHHHHhhccCCCCCccccccccCCChHHHHHHHHHHcCcCC-----C--CCccChhhHHHHHHHHHHHHHhhCCCC
Q 014163 40 EAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASINKNY-----V--DMDEYPVTTELQNRCVNMIAHLFNTPV 112 (429)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~le~~~~~~la~l~g~~~ 112 (429)
++++..+.+.-..+ +..++|... +...+|.+.+++...+...+ . .+...+...++|+.+++++++++|.+.
T Consensus 5 ~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~ 82 (402)
T cd00378 5 PEIAEIIKKENERQ-RETLELIAS-ENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEY 82 (402)
T ss_pred HHHHHHHHHHHHHH-HhCeeeecc-CCcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCc
Confidence 35555555431111 234444332 22456778888876553211 1 123445677888778889999999974
Q ss_pred CCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHH-----HHhcCceeEEEeccCC-
Q 014163 113 ADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF-----ARYFEVELKEVKLEEG- 186 (429)
Q Consensus 113 ~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~-----~~~~G~~v~~v~~~~~- 186 (429)
. .++.++|++|+..++.++.. .+++|+++++.|.++... ++..|.+++.++++.+
T Consensus 83 ~------~v~~~sgt~a~~~~l~~l~~-------------~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 143 (402)
T cd00378 83 A------NVQPHSGSQANLAVYFALLE-------------PGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDP 143 (402)
T ss_pred e------eeecCCcHHHHHHHHHHhcC-------------CCCEEEEecCccCccccccccccccccceeEEEecCCcCc
Confidence 1 34444678999988888754 236899999888754322 5667888888877532
Q ss_pred -ccccCHHHHHHHhh-hCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccC
Q 014163 187 -YYVMNPVKAVELVD-ENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR 264 (429)
Q Consensus 187 -~~~~d~~~l~~~i~-~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~ 264 (429)
++.+|++++++++. .++++|+++++++ |...|+++|+++|+++ |+++++|++|..+.. ........+.
T Consensus 144 ~~~~id~~~l~~~i~~~~~~~v~~~~~~~--~~~~~~~~I~~l~~~~------~~~li~D~a~~~g~~--~~g~~~~~~~ 213 (402)
T cd00378 144 ETGLIDYDALEKMALEFKPKLIVAGASAY--PRPIDFKRFREIADEV------GAYLLVDMAHVAGLV--AGGVFPNPLP 213 (402)
T ss_pred ccCCcCHHHHHHHHHhCCCCEEEecCccc--CCCcCHHHHHHHHHhc------CCEEEEEccchhhhh--hcccCCCccc
Confidence 58999999999996 5788888777655 5677999999999999 999999999743321 1111111222
Q ss_pred CCCeeEEEEcCcccCCCCCCeEEEEEeCCCCccccccccc-CCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHH
Q 014163 265 LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHI-NYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNI 343 (429)
Q Consensus 265 ~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~ 343 (429)
++|+++.++||++.+| +.|++++++++.. +.+.... .+. .++.......++..++..+...+++++
T Consensus 214 --~~dv~~~s~sK~l~G~-~gg~i~~~~~~~~-~~l~~~~~~~~---------~~~~~~~~~~a~~~al~~~~~~~~~~~ 280 (402)
T cd00378 214 --GADVVTTTTHKTLRGP-RGGLILTRKGELA-KKINSAVFPGL---------QGGPHLHVIAAKAVALKEALEPEFKAY 280 (402)
T ss_pred --CCcEEEeccccCCCCC-CceEEEeccHHHH-HHHHHHhCccc---------cCCchHHHHHHHHHHHHHHhhHHHHHH
Confidence 5789999999998554 4566666542322 2221111 111 122222333344444543333356788
Q ss_pred HHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceeccc-CCCCC---CCceE
Q 014163 344 MENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK-LPMSY---PWSTK 419 (429)
Q Consensus 344 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~-~~~~~---~~~~~ 419 (429)
.++..++++++.+.|++.+ ++++..+...+++.+.+.+. +.+...+.+.|. ++|+.+... .|... .+...
T Consensus 281 ~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~~~v~v~~~~~-~~~~~~~~~~l~----~~gI~v~~~~~p~~~~~~~~~~~ 354 (402)
T cd00378 281 AKQVVENAKALAEALKERG-FKVVSGGTDNHLVLVDLRPK-GITGKAAEDALE----EAGITVNKNTLPWDPSSPFVPSG 354 (402)
T ss_pred HHHHHHHHHHHHHHHHhCC-CeEeecCCCCeEEEEeCCcc-CCCHHHHHHHHH----HcCcEEcCCcCCCCCCCCCCCCe
Confidence 8889999999999999985 88764333566676776532 344555565565 899998755 44432 24467
Q ss_pred EEEEec
Q 014163 420 LRVISH 425 (429)
Q Consensus 420 lRi~~~ 425 (429)
+|++++
T Consensus 355 lRi~~~ 360 (402)
T cd00378 355 IRIGTP 360 (402)
T ss_pred eEecCH
Confidence 999874
No 89
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.92 E-value=2.8e-22 Score=196.59 Aligned_cols=326 Identities=13% Similarity=0.053 Sum_probs=214.5
Q ss_pred CccccccccCCC-hHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHH
Q 014163 57 RLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (429)
Q Consensus 57 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~ 135 (429)
.++|+.+.|..+ .+.+.+.+..........|....+..++++.+.+++.+.+|...+. ...++|+|+++|+.+++.
T Consensus 31 ~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~---~~i~it~G~~~al~~~~~ 107 (384)
T PRK06348 31 IIDLSLGDPDLITDESIINAAFEDAKKGHTRYTDSGGDVELIEEIIKYYSKNYDLSFKR---NEIMATVGACHGMYLALQ 107 (384)
T ss_pred cEEcCCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCh---hhEEEcCChHHHHHHHHH
Confidence 355666666644 3445554444333333446556677889999999998877775433 248899999999999888
Q ss_pred HHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEecc-CCccccCHHHHHHHhhhCCeEEEEeeCCCc
Q 014163 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVMNPVKAVELVDENTICVAAILGSTL 214 (429)
Q Consensus 136 a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~-~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~ 214 (429)
++.. .++.|+++.++|..+..+++..|.+++.+|++ ++++.+|+++|++++++++++|++++|+||
T Consensus 108 ~~~~-------------~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NP 174 (384)
T PRK06348 108 SILD-------------PGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLEALITSKTKAIILNSPNNP 174 (384)
T ss_pred HhcC-------------CCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHHHhhCcCccEEEEeCCCCC
Confidence 8754 23689999999999999999999999999874 344789999999999888999999999999
Q ss_pred ccccc---ChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCc-cccC-CCCeeEEEEcCcccCC-CCCCeEEE
Q 014163 215 TGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDFR-LPLVKSINVSGHKYGL-VYAGVGWV 288 (429)
Q Consensus 215 tG~~~---~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~-~~~~d~~~~s~hK~~~-~p~g~g~l 288 (429)
||.+- .+++|.++|+++ ++++++|++|+.+.. ...... ..+. ...-..+..|.-|.++ ++.++||+
T Consensus 175 tG~~~s~~~~~~l~~~a~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~ 246 (384)
T PRK06348 175 TGAVFSKETLEEIAKIAIEY------DLFIISDEVYDGFSF--YEDFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYV 246 (384)
T ss_pred CCcCCCHHHHHHHHHHHHHC------CeEEEEeccccccee--CCCccchhhcCCCcCcEEEEecchhccCCccccceee
Confidence 99985 478889999999 999999999987532 111001 1111 1112344446667654 88999998
Q ss_pred EEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCeEE
Q 014163 289 VWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG--FEGYKNIMENCMGNARALREGLEKTGRFEI 366 (429)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~--~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~ 366 (429)
+..+ .+...+........ .+ ...+.+.++...+. ..-+++..+...++++++.+.|++++++++
T Consensus 247 v~~~--~~~~~~~~~~~~~~---------~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~ 312 (384)
T PRK06348 247 IAPD--YIIETAKIINEGIC---------FS---APTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESIPNLSL 312 (384)
T ss_pred ecCH--HHHHHHHHHHHhcc---------CC---CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCcee
Confidence 8743 22222111111100 01 12223333333332 233556667777888999999998876665
Q ss_pred eeCCCCceEEEE-EecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEecc
Q 014163 367 LSKDVGVPLVAF-SLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHL 426 (429)
Q Consensus 367 ~~~~~~~~~v~f-~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~ 426 (429)
. ++ ..++++| +++. .+.+..++.+.|.+ +.|+.+.+.......+..++|++++.
T Consensus 313 ~-~p-~gg~~~~~~~~~-~~~~~~~l~~~l~~---~~gv~v~pg~~f~~~~~~~iRi~~~~ 367 (384)
T PRK06348 313 H-PP-KGSIYAFINIKK-TGLSSVEFCEKLLK---EAHVLVIPGKAFGESGEGYIRLACTV 367 (384)
T ss_pred c-cC-CeeEEEEEeccc-CCCCHHHHHHHHHH---hCCEEEcCchhhccCCCCeEEEEecC
Confidence 4 33 4565544 4432 13567778777651 57999876522122345689999864
No 90
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.92 E-value=2.8e-22 Score=196.95 Aligned_cols=332 Identities=9% Similarity=-0.056 Sum_probs=218.2
Q ss_pred CCCCCccccccccCCC-hHHHHHHHHHHcCcC-CCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHH
Q 014163 53 DGNPRLNLASFVTTWM-EPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAI 130 (429)
Q Consensus 53 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~ 130 (429)
.++..++|..+.+..+ ++.+.+++...+... ...|...++..++++.+.+|+.+..|.+.+.. ..+.+|+|+++++
T Consensus 28 ~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~--~~I~it~Gs~~al 105 (388)
T PRK07366 28 AGKELIDLSLGSSDLPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPE--TEVLPLIGSQEGT 105 (388)
T ss_pred cCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCc--CeEEECCCcHHHH
Confidence 4556677777777654 556788877766433 33465567888999999999988888654321 1377899999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccC-CccccCHHHHHHHhhhCCeEEEEe
Q 014163 131 MLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAI 209 (429)
Q Consensus 131 ~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~ 209 (429)
.+++.++++ .++.|+++.++|+.+...++..|++++.+|+++ +.+.+|++++++.+.+++++++++
T Consensus 106 ~~~~~~l~~-------------~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~ 172 (388)
T PRK07366 106 AHLPLAVLN-------------PGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLS 172 (388)
T ss_pred HHHHHHhCC-------------CCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcccceEEEEe
Confidence 988887654 236899999999999999999999999999974 347789999998888889999999
Q ss_pred eCCCcccccc---ChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcccc-CC--C-CeeEEEEcCcccC-CC
Q 014163 210 LGSTLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RL--P-LVKSINVSGHKYG-LV 281 (429)
Q Consensus 210 ~~~~~tG~~~---~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~--~-~~d~~~~s~hK~~-~~ 281 (429)
.|+||||.+- .+++|+++|++| ++++++|++|..+.. ........+ .. . ....+..|.-|.+ ++
T Consensus 173 ~p~NPTG~~~s~~~~~~l~~~a~~~------~~~ii~De~Y~~~~~--~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~ 244 (388)
T PRK07366 173 YPHNPTTAIAPLSFFQEAVAFCQQH------DLVLVHDFPYVDLVF--DGEVEPPSILQADPEKSVSIEFFTLSKSYNMG 244 (388)
T ss_pred CCCCCCCccCCHHHHHHHHHHHHHc------CeEEEEecchhhccc--CCCCCCCChhhCCCCcccEEEEeecccccCCc
Confidence 9999999984 466788899999 999999999987532 111100111 11 1 1223444666755 78
Q ss_pred CCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHc--CHHHHHHHHHHHHHHHHHHHHHHH
Q 014163 282 YAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEGYKNIMENCMGNARALREGLE 359 (429)
Q Consensus 282 p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l--~~~g~~~~~~~~~~~~~~l~~~L~ 359 (429)
+.++||++.. ++.+ +.+......... ++. ..+ +.+++..+ ..+.+++..+...++++++.+.|+
T Consensus 245 GlRiG~~v~~-~~li-~~l~~~~~~~~~--------~~~---~~~-~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~ 310 (388)
T PRK07366 245 GFRIGFAIGN-AQLI-QALRQVKAVVDF--------NQY---RGI-LNGAIAALTGPQATVQQTVQIFRQRRDAFINALH 310 (388)
T ss_pred chhheehcCC-HHHH-HHHHHHHhhccc--------CCC---HHH-HHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998753 3222 222111111110 111 111 12222222 245577788888899999999999
Q ss_pred hCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEecc
Q 014163 360 KTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHL 426 (429)
Q Consensus 360 ~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~ 426 (429)
+.+ +....+. ...++.+++++....+..++.+.|. .++|+.+.+.......+..++|++++.
T Consensus 311 ~~~-~~~~~p~-~g~f~~~~~~~~~~~~~~~~~~~l~---~~~gv~v~pg~~f~~~~~~~iRi~~~~ 372 (388)
T PRK07366 311 QIG-WPVPLPE-ATMYVWAKLPEPWQGNSVEFCTQLV---AQTGVAASPGSGFGKSGEGYVRFALVH 372 (388)
T ss_pred HCC-CcccCCC-eeEEEEEECCcccCCCHHHHHHHHH---HhCCEEEeCchHhCcCCCCeEEEEecC
Confidence 885 6544332 4445555554311124566666653 167999876521112234679999864
No 91
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.92 E-value=9.9e-22 Score=193.88 Aligned_cols=333 Identities=15% Similarity=0.099 Sum_probs=216.8
Q ss_pred CCCCccccccccC-----CChHHHHHHHHHHcCcCC-CCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCch
Q 014163 54 GNPRLNLASFVTT-----WMEPECDKLVMASINKNY-VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS 127 (429)
Q Consensus 54 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t 127 (429)
+.+.++|+.+.|. ++++.+.+++...+.... ..|....+..++++.+.+++....|.+.+. ...++|+|++
T Consensus 30 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~---~~ii~t~G~t 106 (403)
T TIGR01265 30 EKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLTA---DDVVLTSGCS 106 (403)
T ss_pred CCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCH---HHEEEecChH
Confidence 4556778888774 345668888877775433 345555677777777666665544443221 2378999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccC-CccccCHHHHHHHhhhCCeEE
Q 014163 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICV 206 (429)
Q Consensus 128 ~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~~~~~v 206 (429)
+|+.+++.++.. .+++|+++.++|..+..+++..|++++.+++++ +++.+|++++++++.++++++
T Consensus 107 ~al~~~~~~l~~-------------~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v 173 (403)
T TIGR01265 107 QAIEICIEALAN-------------PGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEALADEKTVAI 173 (403)
T ss_pred HHHHHHHHHhCC-------------CCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHHhCcCccEE
Confidence 999999988753 236899999999999999999999999998853 347899999999998889999
Q ss_pred EEeeCCCcccccc---ChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCC-c-cccC-CCCeeEEEEcCcc-cC
Q 014163 207 AAILGSTLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-E-WDFR-LPLVKSINVSGHK-YG 279 (429)
Q Consensus 207 ~~~~~~~~tG~~~---~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~-~~~~-~~~~d~~~~s~hK-~~ 279 (429)
++++|+||||.+. ++++|.++|+++ |+++|+|++|+.+.. ..... . ..+. ...+ .+..|.-| |+
T Consensus 174 ~i~~p~NPtG~~~~~~~~~~i~~~a~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~v-i~~~S~SK~~~ 244 (403)
T TIGR01265 174 VVINPSNPCGSVFSRDHLQKIAEVARKL------GIPIIADEIYGHMVF--GDAPFIPMASFASIVPV-LSLGGISKRWV 244 (403)
T ss_pred EEecCCCCCCCCCCHHHHHHHHHHHHHC------CCEEEEEcccccccc--CCCCccchhhhccCCcE-EEEeecccccC
Confidence 9999999999985 489999999999 999999999987531 11111 0 0111 1123 33345566 47
Q ss_pred CCCCCeEEEEEeCCC-Cccccccc-ccCCCCCCCCCceeccCCchhHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHH
Q 014163 280 LVYAGVGWVVWRTKD-DLPDELVF-HINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL---GFEGYKNIMENCMGNARAL 354 (429)
Q Consensus 280 ~~p~g~g~l~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l---~~~g~~~~~~~~~~~~~~l 354 (429)
+++.++||++..+++ .+...+.. ...+.... . + ...+.+.++...+ ....+++..++..++++++
T Consensus 245 ~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~~~---~---~----~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l 314 (403)
T TIGR01265 245 VPGWRLGWIIIHDPHGIFRDTVLQGLKNLLQRI---L---G----PATIVQGALPDILENTPQEFFDGKISVLKSNAELC 314 (403)
T ss_pred CCcceEEEEEEeCchhhhHHHHHHHHHHHhhhh---c---C----CChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 888999999875432 21110100 01111000 0 1 1122233333333 2345677778888899999
Q ss_pred HHHHHhCCCeEEeeCCCCceEEEEEecCC--C-CCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 355 REGLEKTGRFEILSKDVGVPLVAFSLKDS--S-AHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 355 ~~~L~~~~~~~~~~~~~~~~~v~f~~~~~--~-~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
.+.|+.++++++..+. ....+.++++.. . ..+..++.+.|. .++|+.+.+.... ....++|+|++.+
T Consensus 315 ~~~L~~~~~~~~~~p~-~g~f~~~~~~~~~~~~~~~~~~~~~~l~---~~~gv~v~pg~~f--~~~~~iRis~~~~ 384 (403)
T TIGR01265 315 YEELKDIPGLVCPKPE-GAMYLMVKLELELFPEIKDDVDFCEKLV---REESVICLPGSAF--GLPNWVRITITVP 384 (403)
T ss_pred HHHHhcCCCceecCCC-ceeEEEEeccccccCCCCCHHHHHHHHH---HhCCEEEeCcccc--CCCCeEEEEecCC
Confidence 9999988767654432 445555665421 0 125667766643 1789998765211 1246799999753
No 92
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.92 E-value=1.2e-22 Score=200.16 Aligned_cols=320 Identities=16% Similarity=0.068 Sum_probs=207.8
Q ss_pred CCCCCcccccccc-CC-ChHHHHHHHHHHcCcCCCCCccCh---hhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCch
Q 014163 53 DGNPRLNLASFVT-TW-MEPECDKLVMASINKNYVDMDEYP---VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS 127 (429)
Q Consensus 53 ~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t 127 (429)
++.+.++|.++.+ +. ++|.+.+++..++.+....+..+. +...+..++++.+++++|.+. .++++|++
T Consensus 36 ~g~~~i~~~~~~~lg~~~~~~v~~~~~~~~~~~~~~~~~s~~~~G~~~~~~~le~~ia~~~g~~~-------~ii~~~~~ 108 (393)
T TIGR01822 36 DGREVLNFCANNYLGLSSHPDLIQAAKDALDEHGFGMSSVRFICGTQDIHKELEAKIAAFLGTED-------TILYASCF 108 (393)
T ss_pred CCceEEEeeCCCccccCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHhCCCc-------EEEECchH
Confidence 4445556666653 33 357788877777755322333333 445555667778999999853 77778999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhh------
Q 014163 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE------ 201 (429)
Q Consensus 128 ~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~------ 201 (429)
+|+..++.++.+ .+++|++++++|.++...++..+.....++ .+|+++|++++++
T Consensus 109 ~a~~~~~~~l~~-------------~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~------~~d~~~l~~~i~~~~~~~~ 169 (393)
T TIGR01822 109 DANGGLFETLLG-------------AEDAIISDALNHASIIDGVRLCKAKRYRYA------NNDMADLEAQLKEARAAGA 169 (393)
T ss_pred HHHHHHHHHhCC-------------CCCEEEEeccccHHHHHHHHhcCCceEEeC------CCCHHHHHHHHHhhhhcCC
Confidence 999977766543 236899999999999988888877654332 3789999999885
Q ss_pred CCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCC-CCeeEEEEcCcccCC
Q 014163 202 NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRL-PLVKSINVSGHKYGL 280 (429)
Q Consensus 202 ~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~-~~~d~~~~s~hK~~~ 280 (429)
+|++|++.+.+|++|.+.|+++|+++|++| |+++++|++|+.+.............+. .++|+++.+.||++.
T Consensus 170 ~~~~v~~~~v~~~tG~~~~l~~i~~la~~~------~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~ 243 (393)
T TIGR01822 170 RHRLIATDGVFSMDGVIAPLDEICDLADKY------DALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALG 243 (393)
T ss_pred CceEEEEeCCccCCCCcCCHHHHHHHHHHc------CCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhh
Confidence 678888888899999999999999999999 9999999999643321110000001111 258999999999975
Q ss_pred CCCCeEEEEEeCCCCcccccccc-cCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHH
Q 014163 281 VYAGVGWVVWRTKDDLPDELVFH-INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLE 359 (429)
Q Consensus 281 ~p~g~g~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~ 359 (429)
+ ++.|+++.+. +.. +.+... ..+ .+.++.+.....+...+++.+ +..++..++..++++++.+.|+
T Consensus 244 g-~r~G~~~~~~-~~~-~~l~~~~~~~--------~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~ 310 (393)
T TIGR01822 244 G-ASGGFTTARK-EVV-ELLRQRSRPY--------LFSNSLPPAVVGASIKVLEML--EASNELRDRLWANTRYFRERME 310 (393)
T ss_pred C-CCcEEEEeCH-HHH-HHHHHhCccc--------eecCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHH
Confidence 4 5678877543 222 221110 111 122343333334445555543 2356677888999999999998
Q ss_pred hCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceeccc-CCCCCCCceEEEEEecc
Q 014163 360 KTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK-LPMSYPWSTKLRVISHL 426 (429)
Q Consensus 360 ~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~-~~~~~~~~~~lRi~~~~ 426 (429)
+.+ +++..+ ..+++.+...+ ..+..++.+.|. ++|+.+... ++....+...+|++++.
T Consensus 311 ~~g-~~~~~~--~~~~~~i~~~~--~~~~~~l~~~L~----~~gI~v~~~~~~~~~~~~~~iRis~~~ 369 (393)
T TIGR01822 311 AAG-FDIKPA--DHPIIPVMLYD--AVLAQRFARRLL----EEGIYVTGFFYPVVPKGQARIRVQISA 369 (393)
T ss_pred HcC-CCCCCC--CCCEEEEEeCC--HHHHHHHHHHHH----HCCeeEeeeCCCCCCCCCceEEEEECC
Confidence 874 765422 34566665532 123455666666 889888643 33322344569998764
No 93
>PRK07550 hypothetical protein; Provisional
Probab=99.91 E-value=7.2e-22 Score=193.93 Aligned_cols=343 Identities=14% Similarity=0.055 Sum_probs=224.1
Q ss_pred CHHHHHHHHHHhhccCCCCCccccccccCCC-hHHHHHHHHHHcCc-CCCCCccChhhHHHHHHHHHHHHHhhCCCCCCC
Q 014163 38 PKEAAYQVINDELMLDGNPRLNLASFVTTWM-EPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADD 115 (429)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~ 115 (429)
...++++.+.+. ...+.+.+.|+.+.+... .+.+.+.+...+.. ....|....+..++++.+.+++.+..|...+.
T Consensus 13 ~~~~~~~~~~~~-~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~- 90 (386)
T PRK07550 13 PIPEVRAWLAGY-DGADGPLIDLSQAVPGYPPPPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAISP- 90 (386)
T ss_pred HHHHHHHHHHHH-hhcCCCeEEeCCCCCCCCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCc-
Confidence 334444444332 123445566777776654 45577777766532 23345556689999999999999888865432
Q ss_pred CCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccC-CccccCHHH
Q 014163 116 KTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVK 194 (429)
Q Consensus 116 ~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~ 194 (429)
..+++|+|+++|+.+++.++.. .++.|+++.++|..+...++..|++++.++.++ +++.+|+++
T Consensus 91 --~~i~~t~G~~~al~~~~~~l~~-------------~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~ 155 (386)
T PRK07550 91 --EQVHITSGCNQAFWAAMVTLAG-------------AGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAA 155 (386)
T ss_pred --ceEEEecCcHHHHHHHHHHhcC-------------CCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHH
Confidence 2388999999999888887753 236899999999988888899999999999974 447789999
Q ss_pred HHHHhhhCCeEEEEeeCCCccccccC---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcccc-CC---CC
Q 014163 195 AVELVDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RL---PL 267 (429)
Q Consensus 195 l~~~i~~~~~~v~~~~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~---~~ 267 (429)
+++++++++++|++++|+||||.+.+ +++|+++|+++ ++++++|++|+.+.. ........ .. ..
T Consensus 156 l~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~------~~~iI~Dd~y~~~~~---~~~~~~~~~~~~~~~~ 226 (386)
T PRK07550 156 AEALITPRTRAIALVTPNNPTGVVYPPELLHELYDLARRH------GIALILDETYRDFDS---GGGAPHDLFADPDWDD 226 (386)
T ss_pred HHHHhcccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHc------CeEEEEeccchhhcc---CCCCCcchhhCCCccc
Confidence 99999999999999999999999855 88999999999 999999999986421 11111111 11 11
Q ss_pred eeEEEEcCcccCC-CCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC--HHHHHHHH
Q 014163 268 VKSINVSGHKYGL-VYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG--FEGYKNIM 344 (429)
Q Consensus 268 ~d~~~~s~hK~~~-~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~--~~g~~~~~ 344 (429)
-..+..|..|.++ ++.++|+++..+ +.. ..+........ .+ ...+.++++...+. .+..++..
T Consensus 227 ~~i~~~S~SK~~g~~G~RiG~i~~~~-~~~-~~~~~~~~~~~---------~~---~s~~~q~~~~~~l~~~~~~~~~~~ 292 (386)
T PRK07550 227 TLVHLYSFSKSYALTGHRVGAVVASP-ARI-AEIEKFMDTVA---------IC---APRIGQIAVAWGLPNLADWRAGNR 292 (386)
T ss_pred cEEEEecchhhccCcccceEeeecCH-HHH-HHHHHHHhhcc---------cC---CCcHHHHHHHHHhccHHHHHHHHH
Confidence 1344567788664 778999988743 221 21111111000 01 11223333333332 23345566
Q ss_pred HHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEe
Q 014163 345 ENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVIS 424 (429)
Q Consensus 345 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~ 424 (429)
++..++++++.+.|.+++++.+. +....++.++++. .+.+..++.+.|.+ ++|+.+.+.......+..++|+++
T Consensus 293 ~~~~~~~~~l~~~L~~~~~~~~~--~~g~~~~~~~~~~-~~~~~~~l~~~l~~---~~gv~v~pg~~f~~~~~~~iRis~ 366 (386)
T PRK07550 293 AEIARRRDAFRAVFARLPGWELL--ASGAYFAYVRHPF-PDRPSREVARRLAK---EAGILCLPGTMFGPGQEGYLRLAF 366 (386)
T ss_pred HHHHHHHHHHHHHHHhCCCceeC--CCceEEEEecCCC-CCCCHHHHHHHHHH---hcCEEEeCchhhCCCCCCEEEEEe
Confidence 77788899999999987556543 3233444445432 14567788877641 679998775111122346799999
Q ss_pred cc
Q 014163 425 HL 426 (429)
Q Consensus 425 ~~ 426 (429)
+.
T Consensus 367 ~~ 368 (386)
T PRK07550 367 AN 368 (386)
T ss_pred ec
Confidence 75
No 94
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.91 E-value=5.3e-22 Score=192.00 Aligned_cols=319 Identities=16% Similarity=0.022 Sum_probs=215.7
Q ss_pred ChHHHHHHHHH-HcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 68 MEPECDKLVMA-SINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 68 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
+.|.+.+.+.. ..+.+...+...++..++++.+.+++...+|.+... ....+++|+++++..++.++..
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~---~~~~~~~~~t~a~~~~~~~~~~------- 81 (350)
T cd00609 12 PPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPP---EEIVVTNGAQEALSLLLRALLN------- 81 (350)
T ss_pred CCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCc---ceEEEecCcHHHHHHHHHHhCC-------
Confidence 34555554443 333344445667788999999999998887753221 2488999999999888887743
Q ss_pred hcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCH--HHHHHHhhhCCeEEEEeeCCCccccccChHHH
Q 014163 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNP--VKAVELVDENTICVAAILGSTLTGEFEDVKLL 224 (429)
Q Consensus 147 ~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~--~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I 224 (429)
.+++|+++.+.|.++..+++..|..++.++.+++ +..+. +.++..+++++++|++++++|++|.+.|++++
T Consensus 82 ------~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l 154 (350)
T cd00609 82 ------PGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEE-GGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEEL 154 (350)
T ss_pred ------CCCEEEEcCCCchhHHHHHHHCCCEEEEEecccc-cCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHH
Confidence 2368999999999999999999999999999764 44554 77777778889999999999999999876655
Q ss_pred H---HHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCC-CCCCeEEEEEeCCCCccccc
Q 014163 225 H---DLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWVVWRTKDDLPDEL 300 (429)
Q Consensus 225 ~---~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~-~p~g~g~l~~~~~~~~~~~~ 300 (429)
. ++|+++ |+++|+|+||+++................+.|.+..+.||+++ ++.++|++++++++.. +.+
T Consensus 155 ~~l~~~~~~~------~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~-~~~ 227 (350)
T cd00609 155 EELAELAKKH------GILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELL-ERL 227 (350)
T ss_pred HHHHHHHHhC------CeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHH-HHH
Confidence 4 899999 9999999999875431110000011223457899999999987 6678899887553222 222
Q ss_pred ccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEe
Q 014163 301 VFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSL 380 (429)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~ 380 (429)
.....+.. ++.+.....++..+++... +++++..++..++++++.+.|++.+...+. .+....++.+.+
T Consensus 228 ~~~~~~~~---------~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~g~~~~~~~ 296 (350)
T cd00609 228 KKLLPYTT---------SGPSTLSQAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLVVV-KPSGGFFLWLDL 296 (350)
T ss_pred HHHHHhcc---------cCCChHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCcccc-CCCccEEEEEec
Confidence 22211110 2233334444445554332 678888899999999999999998744432 232455666665
Q ss_pred cCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 381 KDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 381 ~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
.+ ..+...+.+.|. +.|+.+.........+...+|++++..
T Consensus 297 ~~--~~~~~~~~~~l~----~~gi~i~~~~~~~~~~~~~iRi~~~~~ 337 (350)
T cd00609 297 PE--GDDEEFLERLLL----EAGVVVRPGSAFGEGGEGFVRLSFATP 337 (350)
T ss_pred CC--CChHHHHHHHHH----hCCEEEecccccccCCCCeEEEEeeCC
Confidence 43 223444555555 889988765211113566899999863
No 95
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.91 E-value=5e-22 Score=195.64 Aligned_cols=328 Identities=12% Similarity=0.018 Sum_probs=217.0
Q ss_pred CCCCccccccccCCC-hHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCC-CCCCCCCCceEeCCchHHHH
Q 014163 54 GNPRLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTP-VADDKTAVGVGTVGSSEAIM 131 (429)
Q Consensus 54 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~-~~~~~~~~~~~t~g~t~a~~ 131 (429)
+.+.++|..+.|+.+ ++.+.+++...++ ....|....+..++++.+.+++.+.+|.+ .+.. ..+++|+|+++++.
T Consensus 28 ~~~~i~l~~~~p~~~~~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~--~~i~it~G~~~al~ 104 (396)
T PRK09147 28 DLPPISLSIGEPKHPTPAFIKDALAANLD-GLASYPTTAGLPALREAIAAWLERRYGLPALDPA--TQVLPVNGSREALF 104 (396)
T ss_pred CCCeEecCCCCCCCCCCHHHHHHHHHHhh-hhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCcc--ceEEECCChHHHHH
Confidence 455667777777754 4557888777664 33446556678889999999999888875 3321 13788999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccC-CccccCHHHHHHHhhhCCeEEEEee
Q 014163 132 LAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAIL 210 (429)
Q Consensus 132 ~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~ 210 (429)
+++.++.+. +..++.|+++.++|..+..+++..|++++.||+++ ++|.+|+++|++.+.++++++++++
T Consensus 105 ~~~~~l~~~----------~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~~~k~i~l~n 174 (396)
T PRK09147 105 AFAQTVIDR----------DGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDAVPAEVWARTQLLFVCS 174 (396)
T ss_pred HHHHHHcCC----------CCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHHHHHHHhhccEEEEEcC
Confidence 888887641 01236899999999999999999999999999974 3478999999998888899999999
Q ss_pred CCCcccccc---ChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccc-------cC---CCCeeEEEEcCcc
Q 014163 211 GSTLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-------FR---LPLVKSINVSGHK 277 (429)
Q Consensus 211 ~~~~tG~~~---~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-------~~---~~~~d~~~~s~hK 277 (429)
|+||||.+- .+++|+++|++| ++|+++|++|+.+.. ........ .+ .+++ .+..|.-|
T Consensus 175 P~NPTG~~~s~~~~~~l~~~a~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v-i~~~S~SK 245 (396)
T PRK09147 175 PGNPTGAVLPLDDWKKLFALSDRY------GFVIASDECYSEIYF--DEAAPPLGLLEAAAELGRDDFKRL-VVFHSLSK 245 (396)
T ss_pred CCCCcCccCCHHHHHHHHHHHHHc------CeEEEeecccccccc--CCCCCCchhhhhccccCccccccE-EEEecccc
Confidence 999999984 677888899999 999999999987431 11000000 00 1223 44445666
Q ss_pred -cCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHH
Q 014163 278 -YGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-FEGYKNIMENCMGNARALR 355 (429)
Q Consensus 278 -~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~-~~g~~~~~~~~~~~~~~l~ 355 (429)
+++++.++||++..+ + +.+.+.....+... + .....+.+++..+. .+.+++..+..+++++.+.
T Consensus 246 ~~~~~GlRiG~~~~~~-~-l~~~~~~~~~~~~~---------~---~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (396)
T PRK09147 246 RSNVPGLRSGFVAGDA-A-LLKKFLLYRTYHGC---------A---MPPAVQAASIAAWNDEAHVRENRALYREKFDAVT 311 (396)
T ss_pred ccCCccceeeeecCCH-H-HHHHHHHHhhhccc---------C---CCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHH
Confidence 788999999987542 2 22222111111110 1 12223444444442 3456677778888888888
Q ss_pred HHHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceeccc--CCC----CCCCceEEEEEeccc
Q 014163 356 EGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK--LPM----SYPWSTKLRVISHLR 427 (429)
Q Consensus 356 ~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~--~~~----~~~~~~~lRi~~~~~ 427 (429)
+.|++. +.+.. +.....+.++++ .+..++.+.|.+ ++|+.+.+. +.. ...+..++|++++..
T Consensus 312 ~~L~~~--~~~~~-p~~g~f~~~~~~----~~~~~~~~~ll~---~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~~ 379 (396)
T PRK09147 312 PILAPV--LDVQL-PDAGFYLWAKVP----GDDTEFARRLYA---DYNVTVLPGSYLAREAHGVNPGAGRVRIALVAP 379 (396)
T ss_pred HHHHHh--cCCCC-CCeeEEEEEECC----CCHHHHHHHHHH---hCCEEEeCCccccccccCCCCCCCeEEEEecCC
Confidence 888874 33332 323444445543 244566666541 679988765 111 112356899998753
No 96
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.91 E-value=7.5e-22 Score=195.21 Aligned_cols=332 Identities=15% Similarity=0.049 Sum_probs=218.6
Q ss_pred CCCCCccccccccC-----CChHHHHHHHHHHcCcC-CCCCccChhhHHHHHHHHHHHHHhhC------CCCCCCCCCCc
Q 014163 53 DGNPRLNLASFVTT-----WMEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFN------TPVADDKTAVG 120 (429)
Q Consensus 53 ~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g------~~~~~~~~~~~ 120 (429)
.+.+.++|+.+.|. .+++.+.+++.+.++.+ ...|....+..++++.+.+++.+.++ .+.+. ..+
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~---~~i 107 (412)
T PTZ00433 31 SPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKK---DNV 107 (412)
T ss_pred CCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCCh---hhE
Confidence 45566788888886 24566888887777643 23455555788899898888887654 22211 248
Q ss_pred eEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccC-CccccCHHHHHHHh
Q 014163 121 VGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELV 199 (429)
Q Consensus 121 ~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i 199 (429)
++|+|+++++.+++.++.. .++.|+++.++|..+...++..|++++.+|+++ +++.+|+++|++++
T Consensus 108 ~it~G~~~al~~~~~~~~~-------------~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~ 174 (412)
T PTZ00433 108 VLCSGVSHAILMALTALCD-------------EGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLV 174 (412)
T ss_pred EEeCChHHHHHHHHHHhcC-------------CCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHh
Confidence 8999999999999888754 236899999999999999999999999999863 34789999999999
Q ss_pred hhCCeEEEEeeCCCcccccc---ChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCc--cccCCCCeeEEEEc
Q 014163 200 DENTICVAAILGSTLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE--WDFRLPLVKSINVS 274 (429)
Q Consensus 200 ~~~~~~v~~~~~~~~tG~~~---~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~~~~~~d~~~~s 274 (429)
++++++|++++|+||||.+- ++++|+++|+++ ++++++|++|..+.. ...... ..+....--.+..|
T Consensus 175 ~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~~i~~~S 246 (412)
T PTZ00433 175 DDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEEL------RLPLISDEIYAGMVF--NGATFTSVADFDTTVPRVILGG 246 (412)
T ss_pred ccCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHc------CCeEEEecccccccc--CCCCccchhhccCCCceEEEcc
Confidence 88899999999999999864 578889999999 999999999986431 111100 01110111234556
Q ss_pred CcccC-CCCCCeEEEEEeCCCCc----ccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC---HHHHHHHHHH
Q 014163 275 GHKYG-LVYAGVGWVVWRTKDDL----PDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG---FEGYKNIMEN 346 (429)
Q Consensus 275 ~hK~~-~~p~g~g~l~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~---~~g~~~~~~~ 346 (429)
.-|.+ +++.++||+++.++... ...+... .... + + ...+.+.++...+. ...+++..++
T Consensus 247 fSK~~~~pGlRlG~~i~~~p~~~~~~~~~~~~~~-~~~~-----~---~----~~~~~q~a~~~~l~~~~~~~~~~~~~~ 313 (412)
T PTZ00433 247 TAKNLVVPGWRLGWLLLVDPHGNGGDFLDGMKRL-GMLV-----C---G----PCSVVQAALGEALLNTPQEHLEQIVAK 313 (412)
T ss_pred chhhcCCCCeeEEEEEEeCCcccHHHHHHHHHHH-hhcc-----C---C----CChHHHHHHHHHHhcCcHHHHHHHHHH
Confidence 67764 88999999987443211 1111110 0000 0 1 12223433333332 3456677778
Q ss_pred HHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCC---CCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEE
Q 014163 347 CMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDS---SAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVI 423 (429)
Q Consensus 347 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~---~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~ 423 (429)
..++++.+.+.|++..++.+..+. ...++.++++.. ...+..++.+.|.+ ++|+.+.+..... ...++|++
T Consensus 314 ~~~~r~~l~~~L~~~~~~~~~~p~-gg~f~~~~l~~~~~~~~~~~~~~~~~ll~---~~gV~v~pg~~f~--~~~~iRis 387 (412)
T PTZ00433 314 LEEGAMVLYNHIGECIGLSPTMPR-GSMFLMSRLDLEKFRDIKSDVEFYEKLLE---EENVQVLPGEIFH--MPGFTRLT 387 (412)
T ss_pred HHHHHHHHHHHHhcCCCCcccCCC-eeEEEEEEechhhcCCCCCHHHHHHHHHH---hcCEEEeCccccC--CCCeEEEE
Confidence 888999999999887556544332 333444455321 01245667766651 4799887652211 23579999
Q ss_pred eccc
Q 014163 424 SHLR 427 (429)
Q Consensus 424 ~~~~ 427 (429)
++..
T Consensus 388 ~~~~ 391 (412)
T PTZ00433 388 ISRP 391 (412)
T ss_pred ecCC
Confidence 9753
No 97
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.91 E-value=2.2e-22 Score=199.72 Aligned_cols=328 Identities=15% Similarity=0.127 Sum_probs=210.0
Q ss_pred cCCCCCcccccccc--CCChH----HHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCC
Q 014163 52 LDGNPRLNLASFVT--TWMEP----ECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVG 125 (429)
Q Consensus 52 ~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g 125 (429)
..+.+.++|..+.| +..+| .+.+++.+++..+...|..+++..+|+++ +++++|.+. +++|+|
T Consensus 33 ~~g~~~~~L~~g~p~~D~~tds~t~a~~~a~~~a~~~g~~~Y~~~~g~~~Lrea----ia~~~~~~~-------vv~t~g 101 (460)
T PRK13238 33 EAGYNPFLLKSEDVFIDLLTDSGTGAMSDRQWAAMMRGDEAYAGSRSYYRLEDA----VKDIFGYPY-------TIPTHQ 101 (460)
T ss_pred HcCCCEEeCCCCCCCCCCCCCCCchhhhHHHHHHHHhCCcccCCCCCHHHHHHH----HHHHhCCCc-------EEECCC
Confidence 35666677777776 34433 36777777775554567888888888876 666677653 899999
Q ss_pred chHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccC-------Ccc--ccCHHHHH
Q 014163 126 SSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-------GYY--VMNPVKAV 196 (429)
Q Consensus 126 ~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-------~~~--~~d~~~l~ 196 (429)
|++|+.+++.++.++ ++ |+++++.+.++...++..|++++.+++++ +.+ .+|+++|+
T Consensus 102 gt~A~~~~~~all~p-------------GD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le 167 (460)
T PRK13238 102 GRAAEQILFPVLIKK-------------GD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLE 167 (460)
T ss_pred HHHHHHHHHHHhCCC-------------CC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHH
Confidence 999999998877541 25 88888877778877889999999999863 124 49999999
Q ss_pred HHhhh----CCeEEEEeeCCCccc-cc---cChHHHHHHHHHhhhccCCCccEEeecccccccccccCC---C-Ccccc-
Q 014163 197 ELVDE----NTICVAAILGSTLTG-EF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYP---D-LEWDF- 263 (429)
Q Consensus 197 ~~i~~----~~~~v~~~~~~~~tG-~~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~---~-~~~~~- 263 (429)
++|++ +|++|++++++|++| .+ +++++|+++|++| |+++++|+|+....+-|... . ...++
T Consensus 168 ~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~------gi~li~Daa~~~e~a~f~~~~e~g~~~~si~ 241 (460)
T PRK13238 168 ALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKY------GIPVVIDAARFAENAYFIKQREPGYKDKSIK 241 (460)
T ss_pred HHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEECcchhhhhhhhhhccccccCCCHH
Confidence 99985 689999999999998 54 5578999999999 99999999884311111110 0 01111
Q ss_pred -----CCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHH-cCH
Q 014163 264 -----RLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIR-LGF 337 (429)
Q Consensus 264 -----~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~-l~~ 337 (429)
-....|++++++||.+++|.| |++++++++.. ..+.... .......++ |..+.....++..+++. +..
T Consensus 242 ~i~~~~~s~~D~~~~Sg~K~g~~~~G-G~i~~~d~~l~-~~~~~~~-~~~~g~~t~---~g~~~~~~~Ala~~l~e~~~~ 315 (460)
T PRK13238 242 EIAREMFSYADGLTMSAKKDAMVNIG-GLLCFRDEDLF-TECRTLC-ILYEGFPTY---GGLAGRDMEALAVGLYEGMDE 315 (460)
T ss_pred HHhhhhcccCcEEEEecccCCCCcce-eEEEcChHHHH-HHhhhcc-cccCCcccc---cCcHHHHHHHHHhhHHHhhCh
Confidence 013589999999999998886 77777653332 2211110 000011111 22222223333334432 222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCC------CCCCHHHHHHHHHHHHhccCceeccc--
Q 014163 338 EGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDS------SAHTVFEISEGLRKKLNRFQVVYPQK-- 409 (429)
Q Consensus 338 ~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~------~~~~~~~~~~~L~~~l~~~G~~~~~~-- 409 (429)
...+...+.+++|.+.|.+.+ +.++.+. ....+...+..- .+....+++.+|.+ +.|+.+...
T Consensus 316 ----~~~~~~~~~~~~l~~~L~~~G-~~~~~p~-Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~---e~GV~~~~~~~ 386 (460)
T PRK13238 316 ----DYLAYRIGQVEYLGEGLEEAG-VPIQTPA-GGHAVFVDAGKFLPHIPAEQFPAQALACELYL---EAGIRGVEIGS 386 (460)
T ss_pred ----HHHHHHHHHHHHHHHHHHHCC-CCeEccC-CceEEEEEchhcCCCCCCCCCchHHHHHHHHH---HcCeeeecccc
Confidence 233334446799999999975 8888654 444444554321 01234667776664 778877543
Q ss_pred --CCCC-CC------CceEEEEEec
Q 014163 410 --LPMS-YP------WSTKLRVISH 425 (429)
Q Consensus 410 --~~~~-~~------~~~~lRi~~~ 425 (429)
.+.+ .. ....+|+++.
T Consensus 387 f~~~~~~~~~~~~~~~~~~~Rla~~ 411 (460)
T PRK13238 387 LLLGRDPKTGEQLPAPAELLRLAIP 411 (460)
T ss_pred eecccCCCCccccCCccceEEEecc
Confidence 1111 11 2578999997
No 98
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.91 E-value=6.5e-23 Score=200.08 Aligned_cols=310 Identities=13% Similarity=0.032 Sum_probs=207.0
Q ss_pred CCChHH-HHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeC-CchHHHHHHHHHHHHHHHH
Q 014163 66 TWMEPE-CDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTV-GSSEAIMLAGLAFKRKWQQ 143 (429)
Q Consensus 66 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~-g~t~a~~~al~a~~~~~~~ 143 (429)
..++|. +.+++....-.+. ..++...++.+++++.+++++|.+.+ ..+.+++ ++|+++..++..+...
T Consensus 21 ~~~~~~~v~~a~~~~~~~~~---hr~~~f~~~~~~~r~~l~~l~~~~~~----~~v~~~~gs~T~~~~~~~~~l~~~--- 90 (378)
T PRK03080 21 CKKRPGWQLEALADALLGRS---HRQKPVKALLKRVIEGTRELLSLPEG----YEVGIVPGSDTGAWEMALWSLLGA--- 90 (378)
T ss_pred cCCChHHHHHHHHhhhcccC---cCCHHHHHHHHHHHHHHHHHhCCCCC----ceEEEECCchHHHHHHHHHhcCCC---
Confidence 344566 7777764432111 23456778888999999999999642 2377775 8999999888776320
Q ss_pred HHHhcCCCCCCcEEEEcCCCchH-HHH-HHHhcCc-eeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccC
Q 014163 144 KRKEQGKPYDKPNIVTGANVQVC-WEK-FARYFEV-ELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFED 220 (429)
Q Consensus 144 ~~~~~g~~~~~~~vi~~~~~h~s-~~~-~~~~~G~-~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~ 220 (429)
++..++. ...|.+ |.. +++.+|+ +++.++.+++ ..+|+++++ . ++.|.++|.+|.||.+.|
T Consensus 91 ---------~~~~vi~-~g~f~~~~~~~~~~~~g~~~v~~~~~~~g-~~~d~~~i~----~-~~~V~~~h~~t~tG~~~p 154 (378)
T PRK03080 91 ---------RRVDHLA-WESFGSKWATDVVKQLKLEDPRVLEADYG-SLPDLSAVD----F-DRDVVFTWNGTTTGVRVP 154 (378)
T ss_pred ---------CcceEEE-eCHHHHHHHHHHHhhcCCCCceEeccCCC-CCCCHhhcC----C-CCCEEEEecCCccceecc
Confidence 1134444 456665 443 4467899 9999998764 578887743 2 567899999999999999
Q ss_pred hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCccccc
Q 014163 221 VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDEL 300 (429)
Q Consensus 221 l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~ 300 (429)
+++|++ +++ |++++||++++.+..+ +++. .+|++.+++|||+++|.|+|+++++++ .+...-
T Consensus 155 i~~I~~--~~~------g~~~vVDa~qs~G~~p-------idv~--~iD~~~~s~~K~l~~P~G~g~l~v~~~-~~~~~~ 216 (378)
T PRK03080 155 VARWIG--ADR------EGLTICDATSAAFALP-------LDWS--KLDVYTFSWQKVLGGEGGHGMAILSPR-AVERLE 216 (378)
T ss_pred chhhcc--ccC------CCeEEEecccccccCC-------CCHH--HCcEEEEehhhhCCCCCceEEEEECHH-HHHhhh
Confidence 999999 888 9999999999876543 2332 379999999999999999999999853 221110
Q ss_pred cccc-----CCC---CC--CCC-C--ceeccCCchhHHHHHHHHHHHcCHH-HHHHHHHHHHHHHHHHHHHHHhCCCeEE
Q 014163 301 VFHI-----NYL---GS--DQP-T--FTLNFSKGSSQIIAQYYQFIRLGFE-GYKNIMENCMGNARALREGLEKTGRFEI 366 (429)
Q Consensus 301 ~~~~-----~~~---~~--~~~-~--~~~~~tr~~~~~~~~~~al~~l~~~-g~~~~~~~~~~~~~~l~~~L~~~~~~~~ 366 (429)
.... .|. .+ ... . ....+|++...+.++.++++.+.+. |++++.++.+++++++++.|++++++++
T Consensus 217 p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~ 296 (378)
T PRK03080 217 SYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAEKTPWATP 296 (378)
T ss_pred cccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 0000 111 00 000 0 1112455555566678899988887 8999999999999999999999987777
Q ss_pred eeC-CC-C-ceEEEEEecCCC-CCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEecc
Q 014163 367 LSK-DV-G-VPLVAFSLKDSS-AHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHL 426 (429)
Q Consensus 367 ~~~-~~-~-~~~v~f~~~~~~-~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~ 426 (429)
+.+ +. + ..+++|++++.. ..+ .++...|. ++|+++...... .....+|+|.+.
T Consensus 297 ~~~~~~~~s~~i~~~~~~~~~~~~~-~~~~~~l~----~~~i~v~~g~~~--~~~~~vRis~~~ 353 (378)
T PRK03080 297 LVADPATRSNTSVTLDFVDAQAAVD-AAAVAKLL----RENGAVDIEPYR--DAPNGLRIWCGP 353 (378)
T ss_pred ccCCccccCccEEEEEcCCchHHHH-HHHHHHHH----HcCCeecccccc--CCCCcEEEecCC
Confidence 643 21 2 358888875310 112 23444454 668776542111 123569999763
No 99
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.91 E-value=5.8e-22 Score=192.15 Aligned_cols=286 Identities=14% Similarity=0.062 Sum_probs=194.2
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
.+++++.+++..+.+. . ....++.+++.+++++++|.+. .++|+|+|+|+++++.++...
T Consensus 24 ~~~~~v~~a~~~~~~~-~------~~~~~~~~~~~~~~a~~~g~~~-------~~~~~g~t~al~~al~al~~~------ 83 (363)
T TIGR01437 24 TVSDEVADAQKRGAQN-Y------FEIKELVNKTGEYIANLLGVED-------AVIVSSASAGIAQSVAAVITR------ 83 (363)
T ss_pred CCCHHHHHHHHHHHhc-C------CCHHHHHHHHHHHHHHhhCCCe-------EEEEcCHHHHHHHHHHHHhcC------
Confidence 4567789988887642 1 1355777889999999999863 789999999999999988642
Q ss_pred hcCC----------CCCCcEEEEcCCCchH----HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEE-EeeC
Q 014163 147 EQGK----------PYDKPNIVTGANVQVC----WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVA-AILG 211 (429)
Q Consensus 147 ~~g~----------~~~~~~vi~~~~~h~s----~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~-~~~~ 211 (429)
|. ...+++|+++.+.+.. +..++.+.|+++++++++ +.+|+++++++|+++|++++ ++++
T Consensus 84 --Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~~---~~~d~~~le~ai~~~t~ai~~v~~~ 158 (363)
T TIGR01437 84 --GNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGYA---NECSAEQLEAAITEKTAAILYIKSH 158 (363)
T ss_pred --CCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcCC---CCCCHHHHHHhcChhceEEEEEecC
Confidence 21 0123488888754443 356778899999999873 46999999999999998766 5677
Q ss_pred CCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEe
Q 014163 212 STLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (429)
Q Consensus 212 ~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~ 291 (429)
++++|.+.|+++|+++|++| |+++|+|+||+... . .....++|++++|+||++.+|. .|+++.+
T Consensus 159 ~~~~g~~~~~~~i~~~a~~~------gi~vivD~a~~~~~--------~-~~~~~g~D~~~~S~~K~l~gp~-~G~l~~~ 222 (363)
T TIGR01437 159 HCVQKSMLSVEDAAQVAQEH------NLPLIVDAAAEEDL--------Q-KYYRLGADLVIYSGAKAIEGPT-SGLVLGK 222 (363)
T ss_pred CCCcCCcCCHHHHHHHHHHc------CCeEEEECCCCCch--------H-HHHHcCCCEEEEeCCcccCCCc-eEEEEEc
Confidence 88999999999999999999 99999999997211 0 0111258999999999988776 7887753
Q ss_pred CCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC
Q 014163 292 TKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV 371 (429)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 371 (429)
++.+ +... . +..+....+. .++ ..++++.+++..+...+. +..++..++++++.+.|++++++++..+.+
T Consensus 223 -~~~i-~~~~--~-~~~~~~~~~~-~~~---~~~~gl~aAl~~~~~~~~-~~~~~~~~~~~~l~~~L~~i~g~~~~~~~~ 292 (363)
T TIGR01437 223 -KKYI-EWVK--L-QSKGIGRAMK-VGK---ENILGLTAALEQYLSTGK-ESGAEMVAKLTPFIEALNTLKGVSASIVQD 292 (363)
T ss_pred -HHHH-HHHH--h-ccCCCcceec-cCH---HHHHHHHHHHHHHHccCc-ccHHHHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 3222 2111 1 1111000000 011 235667777766644332 333344456778999999999898875321
Q ss_pred C------ceEEEEEecCCCCCCHHHHHHHHHHHHhccC--ceecc
Q 014163 372 G------VPLVAFSLKDSSAHTVFEISEGLRKKLNRFQ--VVYPQ 408 (429)
Q Consensus 372 ~------~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G--~~~~~ 408 (429)
. ...+.|.... .+.+..++.+.|. ++| |..+.
T Consensus 293 ~~~~~~~~~~v~~~~~~-~g~~~~~l~~~L~----~~~~~I~~r~ 332 (363)
T TIGR01437 293 EAGRDIARAEIRFDESE-LGMTAADVVQALR----QGEPAIYTRG 332 (363)
T ss_pred CCCCcCceEEEEEeccC-CCCCHHHHHHHHh----cCCCCEEEee
Confidence 1 1234444321 2578889999998 777 55443
No 100
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.91 E-value=4.3e-22 Score=194.47 Aligned_cols=327 Identities=12% Similarity=0.058 Sum_probs=213.8
Q ss_pred CChHHHHHHHHHHcCcCCC-------CCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYV-------DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~ 139 (429)
..+|.+.+++...+.+-+. .|.......++|..+.+...++||.+. ..+-..+|+.||+.++.++..
T Consensus 60 ~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ra~~lf~a~~------anvqp~Sg~~An~~v~~all~ 133 (493)
T PRK13580 60 YSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAEHAKELFGAEH------AYVQPHSGADANLVAFWAILA 133 (493)
T ss_pred cCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHHHHHHHhCCCc------ccccCCCcHHHHHHHHHHHhc
Confidence 4457777776655543211 123345778999999999999999975 355667899999999988875
Q ss_pred HH-----------------HHHHHhcCC-CCCCcEEEE---cCCCchHHHHHHHhcC--ceeEEEeccCCccccCHHHHH
Q 014163 140 KW-----------------QQKRKEQGK-PYDKPNIVT---GANVQVCWEKFARYFE--VELKEVKLEEGYYVMNPVKAV 196 (429)
Q Consensus 140 ~~-----------------~~~~~~~g~-~~~~~~vi~---~~~~h~s~~~~~~~~G--~~v~~v~~~~~~~~~d~~~l~ 196 (429)
+. ..+.+..+. ..+++.|+. +...|.+........| ..++..+++++++.+|+++++
T Consensus 134 ~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~ 213 (493)
T PRK13580 134 HKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFHQRSYGVDPDTGLLDYDEIA 213 (493)
T ss_pred ccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCeeecCcccchhhheeeeEecccCcccCccCHHHHH
Confidence 30 000000000 001355553 3345544332333344 345556666555889999999
Q ss_pred HHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcccc-CCCCeeEEEEcC
Q 014163 197 ELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSG 275 (429)
Q Consensus 197 ~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~d~~~~s~ 275 (429)
+.+.++++.|++++.++..+ ..|+++|+++|+++ |++++||+||+.+..+. ....... ...++|++++++
T Consensus 214 ~~~~~~~plvii~g~S~~~~-~~dl~~i~eia~~~------gA~L~VD~AH~~Gligg--~~~~~~~~~~~~~D~vtgT~ 284 (493)
T PRK13580 214 ALAREFKPLILVAGYSAYPR-RVNFAKLREIADEV------GAVLMVDMAHFAGLVAG--KVFTGDEDPVPHADIVTTTT 284 (493)
T ss_pred HHHhhcCCEEEEeCccccCC-CcCHHHHHHHHHHc------CCEEEEECchhhceecc--ccchhhcCCCCCCcEEEeCC
Confidence 99999999999999999955 77999999999999 99999999998765431 1111011 234799999999
Q ss_pred cccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Q 014163 276 HKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALR 355 (429)
Q Consensus 276 hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~ 355 (429)
||++++|.| |++++++. +.+.+....+++. ++.....+.+...++..+....++++.++..+++++|+
T Consensus 285 hKaL~GP~G-G~I~~~~~--l~~~L~~a~P~i~---------gg~l~p~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La 352 (493)
T PRK13580 285 HKTLRGPRG-GLVLAKKE--YADAVDKGCPLVL---------GGPLPHVMAAKAVALAEARTPEFQKYAQQVVDNARALA 352 (493)
T ss_pred hhhccCCCe-EEEEecHH--HHHHHhhCCCccc---------CCCccHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHH
Confidence 999988886 77777542 2122211112222 33333345545555655544445778999999999999
Q ss_pred HHHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceeccc-CCCCCCC---ceEEEEEecc
Q 014163 356 EGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK-LPMSYPW---STKLRVISHL 426 (429)
Q Consensus 356 ~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~-~~~~~~~---~~~lRi~~~~ 426 (429)
+.|.+.+ +.++......+++.+.+.+. +.....+.+.|. +.||.+... .|.+..+ ...|||++..
T Consensus 353 ~~L~~~G-~~vv~ggTdshIV~V~lg~~-~~~g~~a~~~L~----e~GI~vn~i~~Ptvp~g~~~~srLRIg~~A 421 (493)
T PRK13580 353 EGFLKRG-ARLVTGGTDNHLVLIDVTSF-GLTGRQAESALL----DAGIVTNRNSIPSDPNGAWYTSGIRLGTPA 421 (493)
T ss_pred HHHHhcC-CCccCCCCCCCEEEEEeCCH-HHHHHHHHHHHH----HCCeEEccccCCCCCCCCCCCceEEeccch
Confidence 9999987 88764323578888887542 122234444555 999999877 6666555 6779998753
No 101
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.91 E-value=1e-22 Score=196.48 Aligned_cols=304 Identities=17% Similarity=0.053 Sum_probs=197.0
Q ss_pred cccccCCChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHH
Q 014163 61 ASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRK 140 (429)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~ 140 (429)
....|..++|.+.+++.++.... ..|...+. .+++++++++++| +. ..+++.|||+++..++.++..
T Consensus 3 ~~~~~~~~~~~v~~a~~~~~~~~-~~~~~~~~----~~~l~~~~a~~~g-~~------~~~~~~~gt~a~~~~~~~l~~- 69 (338)
T cd06502 3 RSDTVTGPTPEMLEAMAAANVGD-DVYGEDPT----TAKLEARAAELFG-KE------AALFVPSGTAANQLALAAHTQ- 69 (338)
T ss_pred ccccCCCCCHHHHHHHHhcccCC-cccCCCHH----HHHHHHHHHHHhC-CC------eEEEecCchHHHHHHHHHhcC-
Confidence 34455567788888887654322 12222333 4456677899999 32 288999999999988887643
Q ss_pred HHHHHHhcCCCCCCcEEEEcCCCchHHHH---HHHhcCceeEEEeccCCccccCHHHHHHHhhh-------CCeEEEEee
Q 014163 141 WQQKRKEQGKPYDKPNIVTGANVQVCWEK---FARYFEVELKEVKLEEGYYVMNPVKAVELVDE-------NTICVAAIL 210 (429)
Q Consensus 141 ~~~~~~~~g~~~~~~~vi~~~~~h~s~~~---~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~-------~~~~v~~~~ 210 (429)
.+++|++++++|.++.. .++..|++++.++.+. +.+|+++|++++++ ++++|++++
T Consensus 70 ------------~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~ 135 (338)
T cd06502 70 ------------PGGSVICHETAHIYTDEAGAPEFLSGVKLLPVPGEN--GKLTPEDLEAAIRPRDDIHFPPPSLVSLEN 135 (338)
T ss_pred ------------CCCeEEEecCcceeeecCCcHHHHcCceEEeecCCC--CcCCHHHHHHHhhccCCCcCCcceEEEEEe
Confidence 23689999999987543 3556899999998753 67999999999975 688999999
Q ss_pred CCCcccc--ccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEE
Q 014163 211 GSTLTGE--FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWV 288 (429)
Q Consensus 211 ~~~~tG~--~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l 288 (429)
++|+.|. .+++++|+++|+++ ++++|+|+||..+....... .......++|+++.+.||+++.|.| .+
T Consensus 136 p~n~g~~~~~~~l~~i~~~~~~~------~~~livDea~~~~~~~~~~~--~~~~~~~~~d~~~~s~sK~~~~~~g--~~ 205 (338)
T cd06502 136 TTEGGTVYPLDELKAISALAKEN------GLPLHLDGARLANAAAALGV--ALKTYKSGVDSVSFCLSKGGGAPVG--AV 205 (338)
T ss_pred ecCCccccCHHHHHHHHHHHHHc------CCeEeechHHHHHHHHhcCC--CHHHHHhcCCEEEEeccccCCCccc--eE
Confidence 9997442 46788999999999 99999999986432110110 1111113588999999999877643 33
Q ss_pred EEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEee
Q 014163 289 VWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILS 368 (429)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 368 (429)
++.+++.. +.+.......+ ++.+ ...+.+.+++..+...++.+..++..++++++.+.|++++ +.+.
T Consensus 206 ~~~~~~~~-~~~~~~~~~~~---------~~~~-~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~~-~~~~- 272 (338)
T cd06502 206 VVGNRDFI-ARARRRRKQAG---------GGMR-QSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALEELG-GLES- 272 (338)
T ss_pred EECCHHHH-HHHHHHHHHhC---------CChh-hHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhcC-CCcc-
Confidence 43343322 22211111000 1111 2233445555556555667778889999999999999987 5433
Q ss_pred CCCCceEEEEEecCCCCCCHHHHHHHHHHHHh---ccCceecccCCCCCCCceEEEEEecc
Q 014163 369 KDVGVPLVAFSLKDSSAHTVFEISEGLRKKLN---RFQVVYPQKLPMSYPWSTKLRVISHL 426 (429)
Q Consensus 369 ~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~---~~G~~~~~~~~~~~~~~~~lRi~~~~ 426 (429)
++ ..++++++.... ..+...|.+++. ++|+.+..+ . ..++|++++.
T Consensus 273 ~~-~~~~~~v~~~~~-----~~~~~~l~~~l~~~~~~gi~~~~~-----~-~~~lRi~~~~ 321 (338)
T cd06502 273 EV-QTNIVLLDPVEA-----NAVFVELSKEAIERRGEGVLFYAW-----G-EGGVRFVTHW 321 (338)
T ss_pred cc-cCCeEEEecCCc-----cHHHHHHHHHHHHhhhCCEEEEec-----C-CCeEEEEeec
Confidence 33 678888876432 233444444433 679887643 1 1569999873
No 102
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.91 E-value=6.3e-22 Score=204.49 Aligned_cols=350 Identities=11% Similarity=0.030 Sum_probs=232.9
Q ss_pred CCCCHHHHHHHHHHhhccCCC---CCccccccccCC------ChHHHHHHHHHHcCcCCCCC-ccChhhHHHHHHHHHHH
Q 014163 35 NSMPKEAAYQVINDELMLDGN---PRLNLASFVTTW------MEPECDKLVMASINKNYVDM-DEYPVTTELQNRCVNMI 104 (429)
Q Consensus 35 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~le~~~~~~l 104 (429)
...++.++++++.+...++-. ..+.+++ |+-- ..|. .-.++....++.+ +.+++..++-.++.+++
T Consensus 477 ~~~SE~el~r~~~~La~kn~~~~~~~~~LGs-CTmK~n~~~~~~p~---s~~eF~t~hPyqp~e~sQG~lq~i~elq~~l 552 (954)
T PRK12566 477 AHHSETEMLRYLKQLENKDLALNQSMIPLGS-CTMKLNATSEMIPI---TWPEFAQLHPFAPREQAEGYRAMIDELEAWL 552 (954)
T ss_pred cCCCHHHHHHHHHHHHhcCcCcccCcccCcc-cccCcCcHHhhhcc---cchhhhcCCCCCchhhhcCHHHHHHHHHHHH
Confidence 457899999999887765432 1122333 3221 1122 1123333344444 56788888888999999
Q ss_pred HHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEecc
Q 014163 105 AHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (429)
Q Consensus 105 a~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~ 184 (429)
++++|++. ....-.+|+.+.+.++++.+..+.. .|.+ .+.+|+++...|.+....+...|++++.||++
T Consensus 553 ~eLtGmd~------~Sl~p~sGA~gE~A~Lmair~yh~~----~Ge~-~r~~vLIp~saHgtNpasa~~~GieVv~Vp~D 621 (954)
T PRK12566 553 CAITGFDA------ICMQPNSGAQGEYAGLLAIRRYHRS----RGQS-QRDICLIPSSAHGTNPASAQMAGMRVVIVECD 621 (954)
T ss_pred HHHHCCCe------EeecCCchHHHHHHHHHHHHHHHHh----cCCC-CCCEEEecccccccCHHHHHHCCCEEEEeccC
Confidence 99999985 1333347788888888887653322 1221 34689999999977666688889999999998
Q ss_pred CCccccCHHHHHHHhh---hCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc
Q 014163 185 EGYYVMNPVKAVELVD---ENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW 261 (429)
Q Consensus 185 ~~~~~~d~~~l~~~i~---~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~ 261 (429)
++ |.+|+++|+++++ +++.+|.++++++..+..+|+++|+++||++ |+++++|+|+......+..
T Consensus 622 ~~-G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~------Galv~vDgA~~~a~~~l~~----- 689 (954)
T PRK12566 622 PD-GNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQH------GGQVYMDGANLNAQVGLAR----- 689 (954)
T ss_pred CC-CCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHc------CCEEEEEeeChhhccCCCC-----
Confidence 65 7999999999998 5778899999999887778899999999999 9999999999643221111
Q ss_pred ccCCCCeeEEEEcCcccCCCCCCeEEEEEeC---CCCcccccccccCCCC----CC---CCCceeccCCchhHHHHHHHH
Q 014163 262 DFRLPLVKSINVSGHKYGLVYAGVGWVVWRT---KDDLPDELVFHINYLG----SD---QPTFTLNFSKGSSQIIAQYYQ 331 (429)
Q Consensus 262 ~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~---~~~~~~~~~~~~~~~~----~~---~~~~~~~~tr~~~~~~~~~~a 331 (429)
.+..++|++.+++|||++.|.|.|..++.. ++.+... .+.+.+ +. .......++-.+......|..
T Consensus 690 -Pg~~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~L~pf---Lp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~~A~~Y 765 (954)
T PRK12566 690 -PADIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPF---VANHPVVPVEGPDPNNGAVSAAPWGSASILPISWMY 765 (954)
T ss_pred -hhhcCCCEEEecCCcccCcCccCCCCccchhhhhhhhhhh---ccCCCCcCCCCCCCCCCceeecccchHHHHHHHHHH
Confidence 123479999999999999998887766543 1111111 111211 10 111111233333446667777
Q ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCC---CCceEEEEEec---CCCCCCHHHHHHHHHHHHhccCce
Q 014163 332 FIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKD---VGVPLVAFSLK---DSSAHTVFEISEGLRKKLNRFQVV 405 (429)
Q Consensus 332 l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~---~~~~~v~f~~~---~~~~~~~~~~~~~L~~~l~~~G~~ 405 (429)
+..+|.+ +.+..+....+++|+.++|++. +.+...+ ...+.+.+... ...+.+..+++++|. +.||.
T Consensus 766 i~~lG~e-Lk~aa~~ailnAnYla~rL~~~--~~v~~~~~~~~~~hEfii~~~~l~~~~g~~~~dvakRL~----d~Gih 838 (954)
T PRK12566 766 IAMMGPQ-LADASEVAILSANYLANQLGGA--FPVLYRGRNERVAHECILDLRPLKAQTGISEEDVAKRLM----DYGFH 838 (954)
T ss_pred HHHHCHH-HHHHHHHHHHHHHHHHHHhHhh--CCCCcCCCCCCeeeEEEEEccccccccCCCHHHHHHHHH----HCCcE
Confidence 8888988 8888888899999999999874 3433332 11233444433 222467778888888 99988
Q ss_pred ecccCCCCCCCceEEEEEec
Q 014163 406 YPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 406 ~~~~~~~~~~~~~~lRi~~~ 425 (429)
..+. .++....|||+.+
T Consensus 839 apt~---~fPv~~~LmIepT 855 (954)
T PRK12566 839 APTM---SFPVPGTLMVEPT 855 (954)
T ss_pred EeEE---eeccCCEEEEEee
Confidence 6542 2334566999875
No 103
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=1.1e-21 Score=189.98 Aligned_cols=307 Identities=14% Similarity=0.078 Sum_probs=207.8
Q ss_pred ccccccccCC-ChHHHHHHHHHHcCcC-CCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHH
Q 014163 58 LNLASFVTTW-MEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (429)
Q Consensus 58 ~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~ 135 (429)
+.|..+.++. +++.+.+++.+++... ...|. .+...+ +++.++++++++++ .+.+|+|+++++.+++.
T Consensus 25 ~~l~~~~~~~~~p~~~~~a~~~~~~~~~~~~y~-~~~~~~----lr~~ia~~~~~~~~-----~i~it~G~~~~l~~~~~ 94 (351)
T PRK14807 25 YKMDANETPFELPEEVIKNIQEIVKSSQVNIYP-DPTAEK----LREELARYCSVVPT-----NIFVGNGSDEIIHLIML 94 (351)
T ss_pred eEccCCCCCCCCCHHHHHHHHHHhhcCcccCCC-CccHHH----HHHHHHHHhCCCcc-----cEEEecCHHHHHHHHHH
Confidence 3455555554 3456777777766432 22232 233344 44557777887652 38899999999988888
Q ss_pred HHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhh-CCeEEEEeeCCCc
Q 014163 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTL 214 (429)
Q Consensus 136 a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~ 214 (429)
++.+ .+++|+++.++|..+..+++..|++++.++++++ +.+|++++++++++ ++++|++++++||
T Consensus 95 ~l~~-------------~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~~~~~~~k~v~l~~p~NP 160 (351)
T PRK14807 95 AFIN-------------KGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLKED-YTYDVGSFIKVIEKYQPKLVFLCNPNNP 160 (351)
T ss_pred HhcC-------------CCCEEEEeCCChHHHHHHHHHcCCeEEEeecCCC-CCCCHHHHHHHhhccCCCEEEEeCCCCC
Confidence 7644 2368999999999998899999999999998764 78999999999975 8899999999999
Q ss_pred cccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcccc-CCCCeeEEEEcCcccC-CCCCCeEEEEEeC
Q 014163 215 TGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYG-LVYAGVGWVVWRT 292 (429)
Q Consensus 215 tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~d~~~~s~hK~~-~~p~g~g~l~~~~ 292 (429)
||.+.+.+++.++|+++ +.++++|++|+.+. ........ ..++ ..+..|..|.+ +++.++||++..
T Consensus 161 tG~~~~~~~l~~l~~~~------~~~~ivDe~y~~~~----~~~~~~~~~~~~~-vi~~~S~SK~~~~~GlRiG~~v~~- 228 (351)
T PRK14807 161 TGSVIEREDIIKIIEKS------RGIVVVDEAYFEFY----GNTIVDVINEFEN-LIVLRTLSKAFGLAGLRVGYAVAN- 228 (351)
T ss_pred CCCCCCHHHHHHHHHhC------CCEEEEeCcchhhc----ccchHHHhhhCCC-EEEEecchHhcccchhceeeeecC-
Confidence 99999999999999998 88999999997632 11110001 1122 34445666766 588999998853
Q ss_pred CCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCC
Q 014163 293 KDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVG 372 (429)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 372 (429)
++ +.+.+..... .+ . ...+.+.++...+....+++..++..++++++.+.|++.+++.+. ++ .
T Consensus 229 ~~-~~~~~~~~~~-------~~----~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~-~~-~ 291 (351)
T PRK14807 229 EN-ILKYLNLVKS-------PY----N---INSLSQVIALKVLRTGVLKERVNYILNERERLIKELSKIPGIKVY-PS-K 291 (351)
T ss_pred HH-HHHHHHHccC-------CC----C---cCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-cC-C
Confidence 22 2222211110 00 1 123445556666655557777888888899999999888777754 33 4
Q ss_pred ceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 373 VPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 373 ~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
.+.+.+++. +..++.+.|. ++|+.++.+.. ......++|++++++
T Consensus 292 ~~~~~i~~~-----~~~~~~~~l~----~~gV~v~~~~~-~~~~~~~iRis~~~~ 336 (351)
T PRK14807 292 TNFILVKFK-----DADYVYQGLL----ERGILVRDFSK-VEGLEGALRITVSSC 336 (351)
T ss_pred ccEEEEEcC-----CHHHHHHHHH----HCCEEEEECCC-CCCCCCeEEEEcCCH
Confidence 555555543 2456666666 89999876521 112345799999863
No 104
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.91 E-value=5.3e-22 Score=197.52 Aligned_cols=349 Identities=14% Similarity=0.006 Sum_probs=222.4
Q ss_pred cCCccccccccCchhhhhcCCCCCCCCCCCCHHHHHHHHHHhhccCCCCCccccccccCCCh-HHHHHHHHHHcCcCCCC
Q 014163 8 TDSREILSSTFASRYVRAAIPRFKMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWME-PECDKLVMASINKNYVD 86 (429)
Q Consensus 8 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 86 (429)
-+++|+|....++|++...... ...... ...+...++|..+.|..+. |.+.+++..... ....
T Consensus 53 L~~~g~i~~~~~~G~~v~~~~~-~~~~~~--------------~~~~~~~i~L~~g~p~~~~~p~~~~~~~~~~~-~~~~ 116 (431)
T PRK15481 53 LVTAGLAQSQGRNGTVIRGSPS-PVALEG--------------GDPGTPLHDLAGGNPDPQRLPDLSRYFARLSR-TPRL 116 (431)
T ss_pred HHHCCCEEEeCCCceEEccCcc-hhhhcc--------------cCCcchhhhhhcCCCChhHhHHHHHHHHHhhh-hhhh
Confidence 3679999999999999754331 000000 0011123445555555433 445555554332 2223
Q ss_pred CccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchH
Q 014163 87 MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC 166 (429)
Q Consensus 87 ~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s 166 (429)
|....+..++++.+.+|+.+..+.+ ..+++|+|+++++.+++.++.+ .++.|++++++|..
T Consensus 117 Y~~~~g~~~lr~~ia~~~~~~~~~~------~~Iiit~G~~~al~~~~~~l~~-------------pgd~Vlv~~P~y~~ 177 (431)
T PRK15481 117 YGDAPVSPELHAWAARWLRDDCPVA------FEIDLTSGAIDAIERLLCAHLL-------------PGDSVAVEDPCFLS 177 (431)
T ss_pred cCCcCCCHHHHHHHHHHHhhccCCc------CeEEEecCcHHHHHHHHHHhCC-------------CCCEEEEeCCCcHH
Confidence 4444566777777666665533321 1389999999999999888765 23689999999999
Q ss_pred HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEe-eCCCccccccChH---HHHHHHHHhhhccCCCccEE
Q 014163 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAI-LGSTLTGEFEDVK---LLHDLLTKKNEETGWDTPIH 242 (429)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~-~~~~~tG~~~~l~---~I~~la~~~~~~~~~~~~l~ 242 (429)
+...++..|++++.||++++ .+|+++|++++++++++++++ +++||||.+.+.+ +|.++|++++ ++|++
T Consensus 178 ~~~~~~~~g~~~~~v~~~~~--g~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~-----~~~ii 250 (431)
T PRK15481 178 SINMLRYAGFSASPVSVDAE--GMQPEKLERALAQGARAVILTPRAHNPTGCSLSARRAAALRNLLARYP-----QVLVI 250 (431)
T ss_pred HHHHHHHcCCeEEeeccCCC--CCCHHHHHHHHhcCCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcC-----CceEE
Confidence 99999999999999999764 389999999998888888887 9999999997765 8999998873 79999
Q ss_pred eecccccccccccCCCCc-cccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCc
Q 014163 243 VDAASGGFIAPFLYPDLE-WDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKG 321 (429)
Q Consensus 243 vD~a~~~~~~~~~~~~~~-~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~ 321 (429)
+|++|+.+.. .+... .....+++ .+..|..|.++++.++||++... + +...+.....+... +
T Consensus 251 ~De~Y~~~~~---~~~~~~~~~~~~~v-i~~~SfSK~~~~GlRiG~~i~~~-~-~~~~~~~~~~~~~~---------~-- 313 (431)
T PRK15481 251 IDDHFALLSS---SPYHSVIPQTTQRW-ALIRSVSKALGPDLRLAFVASDS-A-TSARLRLRLNSGTQ---------W-- 313 (431)
T ss_pred ecCchhhhcc---CCCCCCCcCCCCCE-EEEeeeccccCCCceeEEEeCCH-H-HHHHHHHHHhcccc---------C--
Confidence 9999987531 11000 11111233 34445667666889999987532 2 22222111111100 0
Q ss_pred hhHHHHHHHHHHHcCHH----HHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHH
Q 014163 322 SSQIIAQYYQFIRLGFE----GYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRK 397 (429)
Q Consensus 322 ~~~~~~~~~al~~l~~~----g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~ 397 (429)
...+.+.++...+... .+++..+...++++++.+.|++.+ +++..+. ...++.++++. +..++.+.|.
T Consensus 314 -~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~~-~~~~~p~-gg~f~~~~l~~----~~~~~~~~l~- 385 (431)
T PRK15481 314 -VSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQYG-IAIPSPG-DGLNLWLPLDT----DSQATALTLA- 385 (431)
T ss_pred -CCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHcC-CccccCC-CeEEEEEECCC----CHHHHHHHHH-
Confidence 2334455555555322 255667788889999999999874 6543332 44455555532 3467777776
Q ss_pred HHhccCceecccCC-CCCCCceEEEEEecc
Q 014163 398 KLNRFQVVYPQKLP-MSYPWSTKLRVISHL 426 (429)
Q Consensus 398 ~l~~~G~~~~~~~~-~~~~~~~~lRi~~~~ 426 (429)
++|+.+.+... .......++|+|++.
T Consensus 386 ---~~gV~v~pg~~f~~~~~~~~iRis~~~ 412 (431)
T PRK15481 386 ---KSGWLVREGEAFGVSAPSHGLRITLST 412 (431)
T ss_pred ---HCCcEEecCCccccCCCCCeEEEEcCC
Confidence 89999987511 111223579999975
No 105
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.90 E-value=3.5e-22 Score=193.35 Aligned_cols=310 Identities=16% Similarity=0.112 Sum_probs=208.9
Q ss_pred CccccccccCC-ChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHH
Q 014163 57 RLNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (429)
Q Consensus 57 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~ 135 (429)
.++|..+.++. ++|.+.+++.++... ...|. .+... ++++.+++++|++.+ ..++|+|+++++..++.
T Consensus 21 ~i~l~~~~~~~~~~~~~~~a~~~~~~~-~~~y~-~~~~~----~lr~~ia~~~~~~~~-----~i~~~~G~~~~l~~~~~ 89 (346)
T TIGR01141 21 VIKLNSNENPFGPPPKAKEALRAEADK-LHRYP-DPDPA----ELKQALADYYGVDPE-----QILLGNGSDEIIELLIR 89 (346)
T ss_pred eEEccCCCCCCCCCHHHHHHHHHhHHH-hhcCC-CCCHH----HHHHHHHHHhCcChH-----HEEEcCCHHHHHHHHHH
Confidence 34555555443 456688888776532 22232 22223 455668888887642 38899999999987777
Q ss_pred HHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCcc
Q 014163 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT 215 (429)
Q Consensus 136 a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~t 215 (429)
++.+ .+++|++++++|..+...++..|++++.+|++++ +.+|++++++++++++++|++++++|||
T Consensus 90 ~l~~-------------~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~d~~~l~~~~~~~~~~v~l~~p~Npt 155 (346)
T TIGR01141 90 AFLE-------------PGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDED-GQLDLEDILVAIDDKPKLVFLCSPNNPT 155 (346)
T ss_pred HhcC-------------CCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCC-CCCCHHHHHHhcCCCCCEEEEeCCCCCC
Confidence 7643 2368999999998888888999999999999875 7899999999988889999999999999
Q ss_pred ccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcccc-CCCCeeEEEEcCcccC-CCCCCeEEEEEeCC
Q 014163 216 GEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYG-LVYAGVGWVVWRTK 293 (429)
Q Consensus 216 G~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~d~~~~s~hK~~-~~p~g~g~l~~~~~ 293 (429)
|.+.+++++.++|+.+. .++++++|++|+.+.. .....+. ....-+.+..+.+|++ .++.++|+++.+.
T Consensus 156 G~~~~~~~~~~l~~~~~----~~~~ii~D~~y~~~~~----~~~~~~~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~- 226 (346)
T TIGR01141 156 GNLLSRSDIEAVLERTP----EDALVVVDEAYGEFSG----EPSTLPLLAEYPNLIVLRTLSKAFGLAGLRIGYAIANA- 226 (346)
T ss_pred CCCCCHHHHHHHHHhCC----CCcEEEEECchhhhcC----CccHHHHHhhCCCEEEEehhhHhhhchhhhceeeecCH-
Confidence 99999999999988651 1899999999985321 1011111 1112345566789988 5567899988643
Q ss_pred CCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCC
Q 014163 294 DDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF-EGYKNIMENCMGNARALREGLEKTGRFEILSKDVG 372 (429)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~-~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 372 (429)
+.+ +.+..... .+ + .....+.+++..+.. ..+++..++..++++++.+.|++++++++. ++ .
T Consensus 227 ~~~-~~~~~~~~-------~~----~---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~-~ 289 (346)
T TIGR01141 227 EII-DALNKVRA-------PF----N---LSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKLPGLEVY-PS-D 289 (346)
T ss_pred HHH-HHHHhccC-------CC----C---CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEC-CC-c
Confidence 222 22211110 01 1 122334444444433 247778888899999999999998778754 32 4
Q ss_pred ceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEecc
Q 014163 373 VPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHL 426 (429)
Q Consensus 373 ~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~ 426 (429)
..++.+.+.. +..++.+.|. ++|+.+.+....... ..++|+++++
T Consensus 290 g~~~~~~~~~----~~~~~~~~L~----~~gI~v~~g~~f~~~-~~~iRls~~~ 334 (346)
T TIGR01141 290 ANFVLIRFPR----DADALFEALL----EKGIIVRDLNSYPGL-PNCLRITVGT 334 (346)
T ss_pred CCEEEEecCC----CHHHHHHHHH----HCCeEEEeCCCcCCC-CCeEEEecCC
Confidence 5677777642 4566777776 899998765211111 5679999875
No 106
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.90 E-value=9.1e-22 Score=190.99 Aligned_cols=313 Identities=10% Similarity=0.033 Sum_probs=204.7
Q ss_pred CCCccccccccCC-ChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHH
Q 014163 55 NPRLNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLA 133 (429)
Q Consensus 55 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~a 133 (429)
.+.++|....++. +++.+.+++.+.+... ..|. .+.. .++++.+++++|++++ .+.+|+|+++++..+
T Consensus 20 ~~~i~l~~~~~~~~~p~~~~~a~~~~~~~~-~~y~-~~~~----~~lr~~ia~~~~~~~~-----~i~it~Ga~~~l~~~ 88 (356)
T PRK08056 20 DQLLDFSANINPLGMPVSLKRAIIDNLDCA-ERYP-DVEY----RHLHQALARHHQVPAS-----WILAGNGETESIFAV 88 (356)
T ss_pred hhEEEeccccCCCCCCHHHHHHHHHHHHhc-ccCc-CccH----HHHHHHHHHHhCcChh-----hEEECCCHHHHHHHH
Confidence 3445555555543 4566777776655431 1222 2233 3556668888888753 388999999999887
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccC-CccccCHHHHHHHhhhCCeEEEEeeCC
Q 014163 134 GLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGS 212 (429)
Q Consensus 134 l~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~~~ 212 (429)
+.++ . + +.+++..+++..+...++..|++++.+|+++ +++.+| +++++.+.+++++|++++|+
T Consensus 89 ~~~l-~--------~------g~viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~~~k~v~l~~p~ 152 (356)
T PRK08056 89 VSGL-K--------P------RRAMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALTPDLDCLFLCTPN 152 (356)
T ss_pred HHHh-C--------C------CCEEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhccCCCCEEEEeCCc
Confidence 7764 2 1 2466677888889889999999999999864 335666 45566677889999999999
Q ss_pred CccccccC---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCC-CCCCeEEE
Q 014163 213 TLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWV 288 (429)
Q Consensus 213 ~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~-~p~g~g~l 288 (429)
||||.+.+ +++|+++|+++ ++++++|++|..+.. ........+....-+.+..|.+|+++ ++.++||+
T Consensus 153 NPTG~~~~~~~~~~i~~~a~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~ 224 (356)
T PRK08056 153 NPTGLLPERQLLQAIAERCKSL------NIALILDEAFIDFIP--DETGFIPQLADNPHLWVLRSLTKFYAIPGLRLGYL 224 (356)
T ss_pred CCCCCCCCHHHHHHHHHHHHhc------CCEEEEecchhccCC--cchHHHHHhccCCCEEEEEechhhccCcchhheee
Confidence 99999977 88899999999 999999999976431 10000000111124567788999877 88999999
Q ss_pred EEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEe
Q 014163 289 VWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-FEGYKNIMENCMGNARALREGLEKTGRFEIL 367 (429)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~-~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 367 (429)
+..+++.+ ..+.. +. .. .+ ...+++.++...+. .+..++..++.+++++++.+.|++++++.+.
T Consensus 225 v~~~~~~~-~~l~~---~~----~~----~~---~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~ 289 (356)
T PRK08056 225 VNSDDAAV-ARMRR---QQ----MP----WS---INAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCALPLLTVW 289 (356)
T ss_pred ecCCHHHH-HHHHH---hC----CC----Cc---hhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEc
Confidence 87443222 21111 00 00 11 22344555555553 3445566778889999999999998777654
Q ss_pred eCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 368 SKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 368 ~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
++ ..+.+.+++.. +..++.+.|. ++|+.++...........++||+++++
T Consensus 290 -~~-~~~~~~~~~~~----~~~~~~~~l~----~~gI~v~~~~~f~~~~~~~iRis~~~~ 339 (356)
T PRK08056 290 -PG-RANYLFLRCER----PDIDLQRALL----TQRILIRSCANYPGLDSRYYRVAIRSA 339 (356)
T ss_pred -CC-CCcEEEEEcCC----ChHHHHHHHH----HCCeEEEECCCCCCCCCCEEEEEEcCH
Confidence 33 45555555532 2456777777 899998876221122345799999864
No 107
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.90 E-value=2.4e-21 Score=195.04 Aligned_cols=313 Identities=12% Similarity=0.025 Sum_probs=201.3
Q ss_pred HHHHHHHHcCc---CCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhc
Q 014163 72 CDKLVMASINK---NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (429)
Q Consensus 72 ~~~~~~~~~~~---~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~ 148 (429)
+.+.+..+++. ....|....+..++++.+.+++.+..|.+.+. ..+++|+|+++++.+++.++...
T Consensus 93 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~---~~I~it~Ga~~al~~~~~~l~~~-------- 161 (481)
T PTZ00377 93 VVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDP---SDIFLTDGASSGIKLLLQLLIGD-------- 161 (481)
T ss_pred HHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCCh---hhEEEcCCHHHHHHHHHHHhccC--------
Confidence 44444544433 23446677789999999999999887876533 24899999999999999887521
Q ss_pred CCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccC-CccccCHHHHHHHhhh------CCeEEEEeeCCCccccccC-
Q 014163 149 GKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDE------NTICVAAILGSTLTGEFED- 220 (429)
Q Consensus 149 g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~------~~~~v~~~~~~~~tG~~~~- 220 (429)
.+++|+++.++|+.+...++..|++++.+++++ ++|.+|+++|++++++ +++++++++|+||||.+.+
T Consensus 162 ----~gD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~ 237 (481)
T PTZ00377 162 ----PSDGVMIPIPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTR 237 (481)
T ss_pred ----CCCEEEECCCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCH
Confidence 236899999999999999999999999999874 4578999999999975 7889999999999999966
Q ss_pred --hHHHHHHHHHhhhccCCCccEEeecccccccccccCC-CC-cc-----ccCCC---CeeE-EEEcCccc--CCCCCCe
Q 014163 221 --VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYP-DL-EW-----DFRLP---LVKS-INVSGHKY--GLVYAGV 285 (429)
Q Consensus 221 --l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~-~~-~~-----~~~~~---~~d~-~~~s~hK~--~~~p~g~ 285 (429)
+++|+++|++| ++++++|++|+.+.. ..+ .. .. .+.-. .... +..|.-|. .++++++
T Consensus 238 e~~~~i~~~a~~~------~~~iI~De~Y~~l~~--~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRi 309 (481)
T PTZ00377 238 DVMEEIIKFCYEK------GIVLMADEVYQENIY--DGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRG 309 (481)
T ss_pred HHHHHHHHHHHHC------CCEEEEehhhHhhcc--CCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCce
Confidence 88999999999 999999999986321 111 10 00 01000 1112 23356673 5589999
Q ss_pred EEEEEe--CCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC-----HH---HH----HHHHHHHHHHH
Q 014163 286 GWVVWR--TKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-----FE---GY----KNIMENCMGNA 351 (429)
Q Consensus 286 g~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~-----~~---g~----~~~~~~~~~~~ 351 (429)
||+++. +++ +.+.+...... . . + ...+++.++...+. .. .+ ++..++..+++
T Consensus 310 G~~~~~~~p~~-li~~l~~~~~~------~--~-~----~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr 375 (481)
T PTZ00377 310 GYFELTNIPPE-VREQIYKLASI------N--L-C----SNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRA 375 (481)
T ss_pred EEEEEeCCCHH-HHHHHHHHhhe------e--c-C----CChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHH
Confidence 998863 232 22222111110 0 0 1 12233444444431 11 12 22333457788
Q ss_pred HHHHHHHHhCCCeEEeeCCCCceEEEE-EecCCCCC----------CHHHHHHHHHHHHhccCceecccCCCC-CCCceE
Q 014163 352 RALREGLEKTGRFEILSKDVGVPLVAF-SLKDSSAH----------TVFEISEGLRKKLNRFQVVYPQKLPMS-YPWSTK 419 (429)
Q Consensus 352 ~~l~~~L~~~~~~~~~~~~~~~~~v~f-~~~~~~~~----------~~~~~~~~L~~~l~~~G~~~~~~~~~~-~~~~~~ 419 (429)
+.+.+.|++++++.+..+ +.+++.| ++.-+... +..+++.. .+.++|+.+.+..... ..+..+
T Consensus 376 ~~l~~~L~~~~g~~~~~p--~gg~fl~~~~~l~~~~~~~~~~~~~~~~~~~~~~---ll~~~gV~v~pG~~F~~~~~~~~ 450 (481)
T PTZ00377 376 ELLTDELNKIEGVSCQPV--EGAMYAFPRIELPEKAIQEAKERGLAPDVLYCLE---LLESTGIVVVPGSGFGQKPGTYH 450 (481)
T ss_pred HHHHHHHhcCCCcEeecC--CeeEEEEeeccCchhhHHHHHhcCCCcHHHHHHH---HHHHcCEEEeCCcccCCCCCCCE
Confidence 999999999877877643 4555555 33211110 11223222 2337899988762211 134468
Q ss_pred EEEEecc
Q 014163 420 LRVISHL 426 (429)
Q Consensus 420 lRi~~~~ 426 (429)
+|+|++.
T Consensus 451 ~Rls~~~ 457 (481)
T PTZ00377 451 FRITILP 457 (481)
T ss_pred EEEEECC
Confidence 9999974
No 108
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=2.7e-21 Score=189.00 Aligned_cols=310 Identities=13% Similarity=0.009 Sum_probs=207.7
Q ss_pred CCCccccccccC-CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHH
Q 014163 55 NPRLNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLA 133 (429)
Q Consensus 55 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~a 133 (429)
...++|..+.++ .++|.+.+++.... ....| ..+... ++++.+++++|++++ .+.+|+|+++++.++
T Consensus 52 ~~~i~l~~n~~p~~~~~~v~~a~~~~~--~~~~Y-p~~~~~----~lr~~ia~~~~~~~~-----~I~~t~Ga~~~i~~~ 119 (380)
T PLN03026 52 EDIVKLDANENPYGPPPEVLEALGNMK--FPYVY-PDPESR----RLRAALAEDSGLESE-----NILVGCGADELIDLL 119 (380)
T ss_pred cceEEccCCCCCCCCCHHHHHHHHhhH--hhccC-CCCCHH----HHHHHHHHHhCcChh-----hEEEcCCHHHHHHHH
Confidence 344556666544 45566777664321 11112 223333 455668888888752 388999999999988
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHh-hhCCeEEEEeeCC
Q 014163 134 GLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELV-DENTICVAAILGS 212 (429)
Q Consensus 134 l~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i-~~~~~~v~~~~~~ 212 (429)
+.++.+ .+++|++++++|..+...++..|++++.+|.+++ +.+|+++|++++ ++++++|++++|+
T Consensus 120 ~~~~~~-------------~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~~~~~~~~~v~l~~P~ 185 (380)
T PLN03026 120 MRCVLD-------------PGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRTPD-FSLDVPRIVEAVETHKPKLLFLTSPN 185 (380)
T ss_pred HHHhcC-------------CCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCC-CCcCHHHHHHHHhccCCcEEEEeCCC
Confidence 877644 1368999999999898889999999999998754 789999999999 6789999999999
Q ss_pred CccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcccc-CCCCeeEEEEcCccc-CCCCCCeEEEEE
Q 014163 213 TLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKY-GLVYAGVGWVVW 290 (429)
Q Consensus 213 ~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~d~~~~s~hK~-~~~p~g~g~l~~ 290 (429)
||||.+.+.+++.++++ . .+++++|++|..+.. .......+ ..+++ .+..+..|. ++++.++||++.
T Consensus 186 NPTG~~~~~~~l~~l~~-~------~~~vi~DeaY~~~~~---~~~~~~~~~~~~~v-iv~~SfSK~~glaGlRiGy~~~ 254 (380)
T PLN03026 186 NPDGSIISDDDLLKILE-L------PILVVLDEAYIEFST---QESRMKWVKKYDNL-IVLRTFSKRAGLAGLRVGYGAF 254 (380)
T ss_pred CCCCCCCCHHHHHHHHh-c------CCEEEEECcchhhcC---CcchHHHHHhCCCE-EEEecchHhhcCccccceeeec
Confidence 99999999999999996 4 589999999976431 11110011 11233 344455565 468899999886
Q ss_pred eCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeC
Q 014163 291 RTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-FEGYKNIMENCMGNARALREGLEKTGRFEILSK 369 (429)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~-~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 369 (429)
.. +.+ +.+..... .+ + ...+++.++...+. .+.+++..++..+.++++.+.|++++.+.+ .+
T Consensus 255 ~~-~~i-~~l~~~~~-------~~----~---~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~p 317 (380)
T PLN03026 255 PL-SII-EYLWRAKQ-------PY----N---VSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEVPFLEP-YP 317 (380)
T ss_pred CH-HHH-HHHHHhcC-------CC----C---CCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCCCCeE-CC
Confidence 32 222 22111110 01 1 12233444444443 344677778888899999999999875554 33
Q ss_pred CCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 370 DVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 370 ~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
...+++.+++.+ +.+..++.+.|. ++|+.++.+.. .....++|||++++
T Consensus 318 -~~~~f~~~~~~~--~~~~~~~~~~l~----~~gI~v~~~~~--~~~~~~lRis~~~~ 366 (380)
T PLN03026 318 -SDANFILCRVTS--GRDAKKLKEDLA----KMGVMVRHYNS--KELKGYIRVSVGKP 366 (380)
T ss_pred -CCCeEEEEECCC--CCCHHHHHHHHH----HCCeEEEECCC--CCCCCEEEEecCCH
Confidence 356777777642 356677888887 89999876522 23345799999864
No 109
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.90 E-value=1.7e-21 Score=190.96 Aligned_cols=319 Identities=17% Similarity=0.114 Sum_probs=205.6
Q ss_pred CCccccccccCC-ChHHHHHHHHHHcCcCC-CCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHH
Q 014163 56 PRLNLASFVTTW-MEPECDKLVMASINKNY-VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLA 133 (429)
Q Consensus 56 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~a 133 (429)
..++|+...+.. +++.+.+++..+++... ..|....+..+ +++++++++|++++ .+.+|+|+++|+.++
T Consensus 29 ~~i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~----lr~~ia~~l~~~~~-----~v~~~~g~t~al~~~ 99 (380)
T PRK06225 29 EMIWMGQNTNHLGPHEEVREAMIRCIEEGEYCKYPPPEGFPE----LRELILKDLGLDDD-----EALITAGATESLYLV 99 (380)
T ss_pred CeEEccCCCCCCCCCHHHHHHHHHHHhcCCCCCCCCCcchHH----HHHHHHHhcCCCCC-----cEEEeCCHHHHHHHH
Confidence 344555554443 45778888888876532 22322234444 45567888898652 489999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEecc--CCccccCHHHHHHHhhhCCeEEEEeeC
Q 014163 134 GLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE--EGYYVMNPVKAVELVDENTICVAAILG 211 (429)
Q Consensus 134 l~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~--~~~~~~d~~~l~~~i~~~~~~v~~~~~ 211 (429)
+.++.. .++.|++++++|..+..+++..|++++.++++ ++++.+|++++++++++++++|+++++
T Consensus 100 ~~~~~~-------------~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p 166 (380)
T PRK06225 100 MRAFLS-------------PGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDP 166 (380)
T ss_pred HHHhcC-------------CCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCC
Confidence 887753 12579999999998888889999999999974 234789999999999999999999999
Q ss_pred CCccccc---cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCC-CCCCeEE
Q 014163 212 STLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGW 287 (429)
Q Consensus 212 ~~~tG~~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~-~p~g~g~ 287 (429)
+||||.+ +++++|+++|+++ |+++++|++|+.+.... . ...... .....+..+..|+++ ++.++|+
T Consensus 167 ~NptG~~~~~~~~~~i~~~a~~~------~~~ii~De~y~~~~~~~--~-~~~~~~-~~~~i~~~s~SK~~g~~G~RiG~ 236 (380)
T PRK06225 167 LNPLGSSYTEEEIKEFAEIARDN------DAFLLHDCTYRDFAREH--T-LAAEYA-PEHTVTSYSFSKIFGMAGLRIGA 236 (380)
T ss_pred CCCCCcCCCHHHHHHHHHHHHHC------CcEEEEehhHHHHhccC--C-chhhcC-CCCEEEEeechhhcCCccceeEE
Confidence 9999997 4589999999999 99999999997542111 0 000111 123444556679874 5677899
Q ss_pred EEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHc--CHHHHHHHHHHHHHHHHHHHHHHHhCCCeE
Q 014163 288 VVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEGYKNIMENCMGNARALREGLEKTGRFE 365 (429)
Q Consensus 288 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l--~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~ 365 (429)
++.++ +.. +.+.... .. .+ +. ..+.+.++...+ ..+.+++..+...++++.+.+.|++++++.
T Consensus 237 i~~~~-~l~-~~~~~~~---~~---~~---~~----~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 301 (380)
T PRK06225 237 VVATP-DLI-EVVKSIV---IN---DL---GT----NVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKEAVDEIEGVF 301 (380)
T ss_pred EecCH-HHH-HHHHHHH---hc---cc---CC----CHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCcCCc
Confidence 98743 222 2221110 00 00 11 112222222222 122234444555667788888998876554
Q ss_pred EeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceeccc-CCCCCCCceEEEEEecc
Q 014163 366 ILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK-LPMSYPWSTKLRVISHL 426 (429)
Q Consensus 366 ~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~-~~~~~~~~~~lRi~~~~ 426 (429)
+...+...+++.+.+.+. +.+..++.+.|. ++|+.+... ......+..++|++++.
T Consensus 302 ~~~~~~~g~~~~~~~~~~-~~~~~~l~~~l~----~~gi~v~~g~~~~~~~~~~~iR~s~~~ 358 (380)
T PRK06225 302 LPVYPSHGNMMVIDISEA-GIDPEDLVEYLL----ERKIFVRQGTYTSKRFGDRYIRVSFSI 358 (380)
T ss_pred cccCCCCCeEEEEEcccc-cCCHHHHHHHHH----HCCEEEcCCcccCcCCCCceEEEEeCC
Confidence 322232455666665432 356778888887 899988764 11112345689999875
No 110
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.90 E-value=5.8e-21 Score=188.45 Aligned_cols=330 Identities=16% Similarity=0.083 Sum_probs=215.1
Q ss_pred CCccccccccC-----CChHHHHHHHHHHcCcC-CCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHH
Q 014163 56 PRLNLASFVTT-----WMEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEA 129 (429)
Q Consensus 56 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a 129 (429)
..++|..+.|. ++++.+.+++...+... ...|...++..++++++.+++.+ .|.+.+. ..+.+|+|++++
T Consensus 32 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~-~~~~~~~---~~i~~t~G~~~a 107 (401)
T TIGR01264 32 PMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHN-PDGPIEA---DDVVLCSGCSHA 107 (401)
T ss_pred CeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhh-cCCCCCH---HHEEECcChHHH
Confidence 34667777774 34566888887776653 23455666888888887777765 2433211 237899999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccC-CccccCHHHHHHHhhhCCeEEEE
Q 014163 130 IMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAA 208 (429)
Q Consensus 130 ~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~ 208 (429)
+.+++.++.. .++.|+++.++|..+...++..|+++..++++. +++.+|++.|++.+++++++|++
T Consensus 108 l~~~~~~l~~-------------~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~ 174 (401)
T TIGR01264 108 IEMCIAALAN-------------AGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLIDEKTAALIV 174 (401)
T ss_pred HHHHHHHhCC-------------CCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHhccCceEEEE
Confidence 9988887754 235899999999999999999999999998863 24789999999999888999999
Q ss_pred eeCCCcccccc---ChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcccc-CC-CCe-eEEEEcCcc-cCCC
Q 014163 209 ILGSTLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RL-PLV-KSINVSGHK-YGLV 281 (429)
Q Consensus 209 ~~~~~~tG~~~---~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~-~~~-d~~~~s~hK-~~~~ 281 (429)
++|+||||.+. ++++|+++|+++ ++++++|++|..+.. .......+ .. ... .++..|.-| |+++
T Consensus 175 ~~p~NPtG~~~~~~~~~~l~~~a~~~------~~~ii~De~y~~~~~---~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~ 245 (401)
T TIGR01264 175 NNPSNPCGSVFSRQHLEEILAVAERQ------CLPIIADEIYGDMVF---SGATFEPLASLSSTVPILSCGGLAKRWLVP 245 (401)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHHHHC------CCEEEEEhhhhhhcc---CCcccccHHHcCCCCcEEEEccCcccCCCc
Confidence 99999999985 588899999999 999999999987431 11100111 11 111 234455667 6999
Q ss_pred CCCeEEEEEeCCC-CcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHHHHH
Q 014163 282 YAGVGWVVWRTKD-DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG---FEGYKNIMENCMGNARALREG 357 (429)
Q Consensus 282 p~g~g~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~---~~g~~~~~~~~~~~~~~l~~~ 357 (429)
+.++||++..++. .+...+......... .+ + ...+.+.++...+. .+.+++..++..++++++.+.
T Consensus 246 GlRiG~iv~~~~~~~~~~~~~~~~~~~~~---~~---~----~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~ 315 (401)
T TIGR01264 246 GWRLGWIIIHDRRGILRDIRDGLVKLSQR---IL---G----PCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGA 315 (401)
T ss_pred cceEEEEEecCcchhHHHHHHHHHHHhhc---cC---C----CCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999876422 111110000000000 00 0 11223333333332 355677788888899999999
Q ss_pred HHhCCCeEEeeCCCCceEEEEEecC---CCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 358 LEKTGRFEILSKDVGVPLVAFSLKD---SSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 358 L~~~~~~~~~~~~~~~~~v~f~~~~---~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
|++++++....+. ...++.+++.. +...+..++.+.|. .++|+.+.+.... ....++|+|++.+
T Consensus 316 L~~~~~~~~~~p~-~g~f~~~~~~~~~~~~~~~~~~~~~~l~---~~~gI~v~pg~~f--~~~~~iRis~~~~ 382 (401)
T TIGR01264 316 LAAVPGLRPVMPS-GAMYMMVGIEMEHFPEFKNDVEFTERLV---AEQSVFCLPGSCF--EYPGFFRVVLTVP 382 (401)
T ss_pred HHhCCCCcccCCC-eeeEEEEEecccccCCCCCHHHHHHHHH---HhCCEEEeCchhc--CCCCeEEEEEcCC
Confidence 9998666644332 44455555532 11234556666553 1689988764211 1245799999764
No 111
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.90 E-value=4.1e-21 Score=189.01 Aligned_cols=327 Identities=13% Similarity=0.013 Sum_probs=216.4
Q ss_pred CCCCCccccccccCCC-hHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCC--CCCCCCCceEeCCchHH
Q 014163 53 DGNPRLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPV--ADDKTAVGVGTVGSSEA 129 (429)
Q Consensus 53 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~--~~~~~~~~~~t~g~t~a 129 (429)
.+.+.++|..+.|+.. ++.+.+++...+. ....|....+..++++.+.+++.+.+|.+. +.. ...++|+|++++
T Consensus 26 ~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~--~~i~it~Ga~~a 102 (393)
T TIGR03538 26 ASKPPIALSIGEPKHPTPAFVLEALRENLH-GLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPE--RHVLPVNGTREA 102 (393)
T ss_pred cCCCeEEecCCCCCCCCCHHHHHHHHHHhh-ccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCC--ceEEECCCcHHH
Confidence 3456677777777654 4568888877654 334465566788999999999988877752 211 137889999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccC-CccccCHHHHHHHhhhCCeEEEE
Q 014163 130 IMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAA 208 (429)
Q Consensus 130 ~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~ 208 (429)
+.+++.++.+. | ....|+++.++|..+...++..|++++.+|+++ +++.+|++++++++.+++++|++
T Consensus 103 l~~~~~~l~~~--------g---d~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l 171 (393)
T TIGR03538 103 LFAFAQAVINP--------G---QAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRCQLLFV 171 (393)
T ss_pred HHHHHHHHcCC--------C---CcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhhcceEEEE
Confidence 99888887642 2 112489999999999999999999999999963 34789999999999888999999
Q ss_pred eeCCCccccccC---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccc-------cC---CCCeeEEEEcC
Q 014163 209 ILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-------FR---LPLVKSINVSG 275 (429)
Q Consensus 209 ~~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-------~~---~~~~d~~~~s~ 275 (429)
++|+||||.+-+ +++|+++|++| ++++++|++|..+.. ........ .+ .+++ .+..|.
T Consensus 172 ~~p~NPtG~~~s~~~~~~l~~~a~~~------~~~ii~De~Y~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v-i~i~S~ 242 (393)
T TIGR03538 172 CSPGNPTGAVLSLDTLKKLIELADQY------GFIIASDECYSELYF--DEGNPPAGLLQAAAQLGRDDFRRC-LVFHSL 242 (393)
T ss_pred eCCCCCcCcccCHHHHHHHHHHHHHC------CEEEEECcchhhccc--CCCCCCcCHHHhcccccccccccE-EEEecc
Confidence 999999999855 78899999999 999999999986431 10000000 00 1122 445566
Q ss_pred cc-cCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHH
Q 014163 276 HK-YGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-FEGYKNIMENCMGNARA 353 (429)
Q Consensus 276 hK-~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~-~~g~~~~~~~~~~~~~~ 353 (429)
-| |++++.++||++..+ +.. +.+.....+... + .....+.+++..+. .+.+++..++.+++++.
T Consensus 243 SK~~~~~GlRvG~~i~~~-~l~-~~~~~~~~~~~~---------~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~ 308 (393)
T TIGR03538 243 SKRSNLPGLRSGFVAGDA-EIL-KAFLRYRTYHGC---------A---MPIPTQLASIAAWNDEQHVRENRALYREKFAA 308 (393)
T ss_pred hhhcCCcccceEEEecCH-HHH-HHHHHHHHhhcc---------C---cCHHHHHHHHHHhcChHHHHHHHHHHHHHHHH
Confidence 67 788999999987632 222 222111111110 1 12233444444443 34566777778888888
Q ss_pred HHHHHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccC--CC----CCCCceEEEEEecc
Q 014163 354 LREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKL--PM----SYPWSTKLRVISHL 426 (429)
Q Consensus 354 l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~--~~----~~~~~~~lRi~~~~ 426 (429)
+.+.|++. +.+. .+.....+.++++ .+..++.+.|.+ ++|+.+.+.. .. ...+..++||+++.
T Consensus 309 ~~~~L~~~--~~~~-~p~gg~f~~~~~~----~~~~~~~~~l~~---~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~ 377 (393)
T TIGR03538 309 VLEILGQV--LDLE-LPDAGFYLWPKVP----GDDEAFARALYE---EENVTVLPGRFLAREAEGVNPGEGRVRIALVA 377 (393)
T ss_pred HHHHHHhh--Cccc-CCCeeEEEEEECC----CCHHHHHHHHHH---HCCEEEeCCccccccccCCCCCCCEEEEEecC
Confidence 99999875 3333 2323444455543 234567766541 5799987652 11 12345689999864
No 112
>PRK09265 aminotransferase AlaT; Validated
Probab=99.90 E-value=3.4e-21 Score=190.20 Aligned_cols=331 Identities=14% Similarity=0.090 Sum_probs=203.5
Q ss_pred CCCCCccccccccC---C-ChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhh--CCCCCCCCCCCceEeCCc
Q 014163 53 DGNPRLNLASFVTT---W-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLF--NTPVADDKTAVGVGTVGS 126 (429)
Q Consensus 53 ~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~--g~~~~~~~~~~~~~t~g~ 126 (429)
.+++.++|..+.|. . +++.+.+.+...+.. ...|....+..++++.+.+++.... ++++ ..+.+|+|+
T Consensus 31 ~~~~~i~l~~g~p~~~~~~~~~~i~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~-----~~i~~t~G~ 104 (404)
T PRK09265 31 EGHKILKLNIGNPAPFGFEAPDEILRDVIRNLPT-AQGYSDSKGLFSARKAIMQYYQQKGIPDVDV-----DDIYIGNGV 104 (404)
T ss_pred cCCCeEEecCCCCCcCCCCCCHHHHHHHHHHhhc-CCCCCCCCCcHHHHHHHHHHHhccCCCCCCc-----ccEEEeCCh
Confidence 44455566666653 2 345566666655442 3345555566778877777765432 3333 238899999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccC-CccccCHHHHHHHhhhCCeE
Q 014163 127 SEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTIC 205 (429)
Q Consensus 127 t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~~~~~ 205 (429)
++++.+++.++.. .++.|++++++|..+..+++..|..+..++++. +++.+|++++++++++++++
T Consensus 105 ~~~l~~~~~~~~~-------------~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~ 171 (404)
T PRK09265 105 SELIVMAMQALLN-------------NGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKITPRTKA 171 (404)
T ss_pred HHHHHHHHHHhCC-------------CCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHHHhccccceE
Confidence 9999888877643 236899999999999999999999998888763 34789999999999888999
Q ss_pred EEEeeCCCccccccC---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcccc-CC-CCeeEEEE-cCcccC
Q 014163 206 VAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RL-PLVKSINV-SGHKYG 279 (429)
Q Consensus 206 v~~~~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~-~~~d~~~~-s~hK~~ 279 (429)
|++++|+||||.+.+ +++|+++|+++ ++++++|++|+.+.. .......+ .. ....++++ +.-|.+
T Consensus 172 v~l~~P~NPtG~~~~~~~~~~i~~~a~~~------~~~ii~De~y~~~~~---~~~~~~~~~~~~~~~~vi~~~S~SK~~ 242 (404)
T PRK09265 172 IVIINPNNPTGAVYSKELLEEIVEIARQH------NLIIFADEIYDKILY---DGAVHISIASLAPDLLCVTFNGLSKAY 242 (404)
T ss_pred EEEECCCCCCCcCCCHHHHHHHHHHHHHC------CCEEEEehhhhhccC---CCCCcCCHHHcCCCceEEEEecchhhc
Confidence 999999999999977 88999999999 999999999986431 11110111 11 12233333 335654
Q ss_pred -CCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCH-HHHHHHH---HHHHHHHHHH
Q 014163 280 -LVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF-EGYKNIM---ENCMGNARAL 354 (429)
Q Consensus 280 -~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~-~g~~~~~---~~~~~~~~~l 354 (429)
+++.++||+++..+..+.+.+.......... .+ + ...+.+.++...+.. +.+++.. ++..+.++++
T Consensus 243 ~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~--~~---~----~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~ 313 (404)
T PRK09265 243 RVAGFRVGWMVLSGPKKHAKGYIEGLDMLASM--RL---C----ANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRA 313 (404)
T ss_pred cCcccceEEEEEeCchHHHHHHHHHHHHHhcc--cc---C----CCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHH
Confidence 7889999998743322111000000000000 00 1 112234444444431 2222222 3566778889
Q ss_pred HHHHHhCCCeEEeeCCCCceEEEE-EecCCC--CCCH-HHHHHHHHHHHhccCceecccCCCCCCCceEEEEEecc
Q 014163 355 REGLEKTGRFEILSKDVGVPLVAF-SLKDSS--AHTV-FEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHL 426 (429)
Q Consensus 355 ~~~L~~~~~~~~~~~~~~~~~v~f-~~~~~~--~~~~-~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~ 426 (429)
.+.|++++++++..+ ..+.++| ++++.. ..+. ..+.+.|. ++|+.+.+.......+..++|++++.
T Consensus 314 ~~~L~~~~~~~~~~p--~~g~~l~~~~~~~~~~~~~~~~~~~~~l~----~~gv~v~pg~~F~~~~~~~~Ri~~~~ 383 (404)
T PRK09265 314 WELLNAIPGVSCVKP--KGALYAFPKLDPKVYPIHDDEQFVLDLLL----QEKVLLVQGTGFNWPEPDHFRIVTLP 383 (404)
T ss_pred HHHHhcCCCCcccCC--CcceEEEEEecccccCCCCHHHHHHHHHH----hCCEEEECchhhCCCCCCeEEEEeCC
Confidence 999988876765533 3444444 554310 0122 23444455 89999876522122334679999964
No 113
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.90 E-value=9.2e-22 Score=191.12 Aligned_cols=309 Identities=15% Similarity=0.145 Sum_probs=210.1
Q ss_pred ccccccccCC-ChHHHHHHHHHHcCcC-CCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHH
Q 014163 58 LNLASFVTTW-MEPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (429)
Q Consensus 58 ~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~ 135 (429)
++|....+++ +++.+.+.+.+++..+ ...|.. ++..++ ++.+++++|.+.+ ..+++|+|+++++.+++.
T Consensus 29 i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~l----r~~ia~~~~~~~~----~~I~~t~G~~~~i~~~~~ 99 (356)
T PRK04870 29 VKLDAMENPYRLPAELRAELGERLAEVALNRYPD-PRAAAL----KAALRAAMGVPAG----ADVLLGNGSDELIQLLAL 99 (356)
T ss_pred eeCcCCCCCCCCCHHHHHHHHHHhhccccccCCC-CCHHHH----HHHHHHHhCcCCC----CcEEEcCCHHHHHHHHHH
Confidence 4455555554 4667888888777543 233433 444444 4557777787542 138899999999988887
Q ss_pred HHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhh-CCeEEEEeeCCCc
Q 014163 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTL 214 (429)
Q Consensus 136 a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~ 214 (429)
++.+ .+++|+++.++|..+..+++..|++++.+|++++ +.+|+++|++++.. ++++|++++++||
T Consensus 100 ~~~~-------------~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~-~~~d~~~l~~~~~~~~~~~v~l~~p~NP 165 (356)
T PRK04870 100 ACAK-------------PGATVLAPEPGFVMYRMSAKLAGLEFVGVPLTAD-FTLDLPAMLAAIAEHRPALVFLAYPNNP 165 (356)
T ss_pred HhcC-------------CCCEEEECCCCHHHHHHHHHHcCCEEEEecCCCC-CCCCHHHHHHHhhcCCCCEEEEcCCCCC
Confidence 7654 2368999999999999999999999999999865 78999999999964 7899999999999
Q ss_pred cccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcccc-CCCCeeEEEEcCcccCCCCCCeEEEEEeCC
Q 014163 215 TGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (429)
Q Consensus 215 tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~ 293 (429)
||.+.+.+++.++++.. ++++++|++|..+.. ......+ ..++ ..+..|..|++.++.++|+++...
T Consensus 166 tG~~~~~~~~~~i~~~~------~~~ii~De~y~~~~~----~~~~~~~~~~~~-vi~~~S~SK~~~~GlRiG~~i~~~- 233 (356)
T PRK04870 166 TGNLFDDADVERIIEAA------PGLVVVDEAYQPFAG----DSWLPRLARFPN-LLVMRTVSKLGLAGLRLGYLAGHP- 233 (356)
T ss_pred CCCCCCHHHHHHHHHHC------CCEEEEECCchhhcC----cchHHHHhhCCC-EEEEecchhhhhHHHhhhhhhCCH-
Confidence 99999999999999988 889999999976421 1110011 1123 345556778888888999987642
Q ss_pred CCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCC
Q 014163 294 DDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-FEGYKNIMENCMGNARALREGLEKTGRFEILSKDVG 372 (429)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~-~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 372 (429)
+.+ +.+..... .+ + ...+.+.++...+. .+.+++..++..++++++.+.|++++++.+. ++ .
T Consensus 234 ~~i-~~~~~~~~-------~~----~---~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~-~ 296 (356)
T PRK04870 234 AWI-AELDKVRP-------PY----N---VNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAALPGVTVF-PS-A 296 (356)
T ss_pred HHH-HHHHHccC-------CC----c---CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CC-C
Confidence 222 22111110 00 1 11223333333332 3447778888889999999999998777654 33 4
Q ss_pred ceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 373 VPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 373 ~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
.+++.++++ +..++.+.|. ++|+.+............++|+++++.
T Consensus 297 ~~~~~~~~~-----~~~~~~~~l~----~~gI~v~~~~~f~~~~~~~iRis~~~~ 342 (356)
T PRK04870 297 ANFILVRVP-----DAAAVFDGLK----TRGVLVKNLSGMHPLLANCLRVTVGTP 342 (356)
T ss_pred CeEEEEECC-----CHHHHHHHHH----HCCEEEEECCCCCCCCCCeEEEeCCCH
Confidence 566666653 3456666666 999998765221122346799999864
No 114
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.90 E-value=2.5e-21 Score=192.03 Aligned_cols=311 Identities=14% Similarity=0.084 Sum_probs=197.9
Q ss_pred CChHHHHHHHHHHcCcCC--CC-----CccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNY--VD-----MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~ 139 (429)
+++|.+.+++...+...+ +. +...+....+|+.+++++++++|++.. .++.++||+|+..++.++..
T Consensus 36 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g~~~~------~i~~~sgt~al~~~l~~l~~ 109 (416)
T PRK00011 36 FVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFGAEYA------NVQPHSGSQANAAVYFALLK 109 (416)
T ss_pred cCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhCCCce------eeecCCchHHHHHHHHHhcC
Confidence 356778887766543211 11 112335667777788899999999752 23444678899887777643
Q ss_pred HHHHHHHhcCCCCCCcEEEEcCCCchHHHH---H--HHhcCceeEEEeccCCccccCHHHHHHHhhh-CCeEEEEeeCCC
Q 014163 140 KWQQKRKEQGKPYDKPNIVTGANVQVCWEK---F--ARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGST 213 (429)
Q Consensus 140 ~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~---~--~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~~ 213 (429)
.+++|+++.++|.++.. . ....|++++.++++++++.+|++++++++++ +|++|+++.+
T Consensus 110 -------------~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~k~v~~~~~-- 174 (416)
T PRK00011 110 -------------PGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALEHKPKLIIAGAS-- 174 (416)
T ss_pred -------------CCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHHHHHHHHhcCCCEEEECCC--
Confidence 23689999999875321 1 2334677888888754478999999999976 7888776543
Q ss_pred ccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCC
Q 014163 214 LTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (429)
Q Consensus 214 ~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~ 293 (429)
.+|...|+++|+++|+++ |+++++|+||+.+.. ........+. ++|+++.++||++.+|. .|+++++++
T Consensus 175 ~~~~~~~~~~I~~la~~~------~~~livD~a~~~g~~--~~g~~~~~~~--~~di~~~S~~K~l~g~~-gg~i~~~~~ 243 (416)
T PRK00011 175 AYSRPIDFKRFREIADEV------GAYLMVDMAHIAGLV--AAGVHPSPVP--HADVVTTTTHKTLRGPR-GGLILTNDE 243 (416)
T ss_pred cCCCccCHHHHHHHHHHc------CCEEEEECcchhccc--ccCccCCCCC--CCcEEEecCCcCCCCCC-ceEEEeCCH
Confidence 456778999999999999 999999999864332 1111112222 68999999999986555 467776543
Q ss_pred CCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCc
Q 014163 294 DDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGV 373 (429)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 373 (429)
+.. +.+.... +.. ..++.......++..++.....++++++.++..++++++.+.|++.+ +++.......
T Consensus 244 ~~~-~~l~~~~-~~~-------~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~~~~~~ 313 (416)
T PRK00011 244 ELA-KKINSAV-FPG-------IQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAERG-FRVVSGGTDN 313 (416)
T ss_pred HHH-HHHHHHh-Ccc-------ccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCC-CeeeecCCCC
Confidence 332 2221111 110 01222223344444455444455678899999999999999999985 8776422245
Q ss_pred eEEEEEecCCCCCCHHHHHHHHHHHHhccCceeccc-CCC---CCCCceEEEEEe
Q 014163 374 PLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK-LPM---SYPWSTKLRVIS 424 (429)
Q Consensus 374 ~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~-~~~---~~~~~~~lRi~~ 424 (429)
+++.+.+.+. +.+..++.+.|. ++|+.+... .|. .......+|++.
T Consensus 314 ~~~~i~~~~~-~~~~~~~~~~L~----~~GI~v~~~~~p~~~~~~~~~~~~Ri~~ 363 (416)
T PRK00011 314 HLVLVDLRSK-GLTGKEAEAALE----EANITVNKNAVPFDPRSPFVTSGIRIGT 363 (416)
T ss_pred eEEEEeCccc-CCCHHHHHHHHH----HcCcEEccCcCCCCCCCCCCCCceEecC
Confidence 7777776432 345566777776 899998743 121 111234589853
No 115
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.90 E-value=2.2e-21 Score=185.71 Aligned_cols=301 Identities=16% Similarity=0.086 Sum_probs=213.1
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhC-CCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFN-TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g-~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~ 145 (429)
+++|.+.+++...+.. ...| ..+... ++++.+++.+| .+. ..+..++|++|.+...+++.+.+
T Consensus 35 gp~~~~~~~~~~~~~~-~~rY-Pd~~~~----~l~~a~a~~~~~~~~-----~~V~~gnGsde~i~~l~~~~~~~----- 98 (356)
T COG0079 35 GPPPKVIEAIRAALDK-LNRY-PDPDYR----ELRAALAEYYGVVDP-----ENVLVGNGSDELIELLVRAFVEP----- 98 (356)
T ss_pred CCCHHHHHHHHHHHHh-hccC-CCCcHH----HHHHHHHHHhCCCCc-----ceEEEcCChHHHHHHHHHHhhcC-----
Confidence 4456677777666542 1111 222334 44455888888 543 23778999999999999988762
Q ss_pred HhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHH
Q 014163 146 KEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLH 225 (429)
Q Consensus 146 ~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~ 225 (429)
++.|+++.+++..+...++..|++++.||..+ +.+|++.+.+.+.+++++|++++||||||..-+.++|.
T Consensus 99 --------gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~--~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~~l~ 168 (356)
T COG0079 99 --------GDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE--FRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPREELR 168 (356)
T ss_pred --------CCEEEEcCCChHHHHHHHHhcCCeEEEecccc--cccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHH
Confidence 25899999999999999999999999999876 89999999999999999999999999999999999999
Q ss_pred HHHHHhhhccCCCccEEeecccccccccccCCCCcccc-CCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCccccccccc
Q 014163 226 DLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHI 304 (429)
Q Consensus 226 ~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~ 304 (429)
++++..++ +.+|++|+||..|.- +...... .-.++-++-..++-+++++.++|+++. +++.+........
T Consensus 169 ~l~~~~~~----~~~vVvDEAY~eF~~----~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia-~~~~i~~l~~vr~ 239 (356)
T COG0079 169 ALLEALPE----GGLVVIDEAYIEFSP----ESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIA-NPELIAALNKVRP 239 (356)
T ss_pred HHHHhCCC----CcEEEEeCchhhcCC----chhhhhccCCCCEEEEEecHHhhhcchhceeeccC-CHHHHHHHHHhcC
Confidence 99997632 689999999987542 1110000 112345555455558999999999664 4433321111112
Q ss_pred CCCCCCCCCceeccCCchhHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCC
Q 014163 305 NYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-FEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDS 383 (429)
Q Consensus 305 ~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~-~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~ 383 (429)
+|. ....++.++...+. .+.+++.+++..+.++++.+.|+.++ +.-+.+. ..|++.+++..
T Consensus 240 p~~---------------v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v~pS-~aNFvlv~~~~- 301 (356)
T COG0079 240 PFN---------------VSSPALAAAIAALRDADYLEESVERIREERERLYAALKALG-LFGVFPS-QANFVLVRVPD- 301 (356)
T ss_pred CCC---------------CCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhCC-CCeecCC-CCcEEEEECCC-
Confidence 221 23344555555443 46678889999999999999999998 6533333 58888888753
Q ss_pred CCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 384 SAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 384 ~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
.. ...+.+.|. ++|+.++.+.. ......++||||+++
T Consensus 302 -~~-~~~l~~~L~----~~giivR~~~~-~~~~~~~lRitvgt~ 338 (356)
T COG0079 302 -AE-AAALAEALL----KKGILVRDCSS-VGLLPGYLRITVGTP 338 (356)
T ss_pred -cc-HHHHHHHHH----HCCEEEEeCCC-CCCCCCeEEEEeCCH
Confidence 22 456777777 99999998733 223455799999875
No 116
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.90 E-value=6.7e-21 Score=187.42 Aligned_cols=328 Identities=14% Similarity=0.063 Sum_probs=208.4
Q ss_pred ccccccccCCC-hHHHHHHHHHHcCcC---CCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHH
Q 014163 58 LNLASFVTTWM-EPECDKLVMASINKN---YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLA 133 (429)
Q Consensus 58 ~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~a 133 (429)
++|..+.|+++ ++.+.+++..+++.. ...|....+..++++.+.+++.+.++...+. ...++|+|+++++..+
T Consensus 36 ~~l~~g~p~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~---~~i~~t~G~~~al~~~ 112 (394)
T PRK06836 36 FDFSLGNPSVPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTA---DHIVMTCGAAGALNVA 112 (394)
T ss_pred EEecCcCCCCCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCc---CcEEEeCChHHHHHHH
Confidence 55666666543 456778777666532 2335455678888888888887766653322 2388999999999988
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCC
Q 014163 134 GLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGST 213 (429)
Q Consensus 134 l~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~ 213 (429)
+.++.. .++.|++++++|..+..+++..|++++.+|++++++.+|+++|++++++++++|++++++|
T Consensus 113 ~~~l~~-------------~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~N 179 (394)
T PRK06836 113 LKAILN-------------PGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTDTFQPDLDALEAAITPKTKAVIINSPNN 179 (394)
T ss_pred HHHhcC-------------CCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCccCcCCHHHHHhhcCcCceEEEEeCCCC
Confidence 887654 2368999999999999999999999999999865578999999999999999999999999
Q ss_pred ccccccC---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCC-CCCCeEEEE
Q 014163 214 LTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGL-VYAGVGWVV 289 (429)
Q Consensus 214 ~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~-~p~g~g~l~ 289 (429)
|||.+.+ +++|+++|++.+++++.++++++|++|..+.. .............-..+..|..|.++ ++.++||++
T Consensus 180 PtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~i~~~S~SK~~~~pGlRiG~~~ 257 (394)
T PRK06836 180 PTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVY--DGAEVPYIFKYYDNSIVVYSFSKSLSLPGERIGYIA 257 (394)
T ss_pred CCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccc--CCCCCCChHHccCcEEEEecchhhccCcceeeEEEe
Confidence 9999865 66777778881111111999999999987431 11111111111122456667788664 788999988
Q ss_pred EeCCCCcccc--cccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEe
Q 014163 290 WRTKDDLPDE--LVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEIL 367 (429)
Q Consensus 290 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 367 (429)
..+. . .+. +........... +.- ....+.+.+....+... ...++..++++.+.+.|++++ +++.
T Consensus 258 ~~~~-~-~~~~~~~~~~~~~~~~~------~~~-~~~~~~q~~~~~~l~~~---~~~~~~~~~r~~l~~~L~~~g-~~~~ 324 (394)
T PRK06836 258 VNPE-M-EDADDLVAALVFANRIL------GFV-NAPALMQRVVAKCLDAT---VDVSIYKRNRDLLYDGLTELG-FECV 324 (394)
T ss_pred cCHH-H-hhhHHHHHHHHHHhhcc------ccc-cCCHHHHHHHHHHhCCh---HHHHHHHHHHHHHHHHHHhCC-CEee
Confidence 7532 1 110 000000000000 000 01222333333333321 123456677888999998885 7665
Q ss_pred eCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEecc
Q 014163 368 SKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHL 426 (429)
Q Consensus 368 ~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~ 426 (429)
.+ ..+.+.|.-.+. .+..++.+.|. ++|+.+.+..... ...++||+++.
T Consensus 325 ~~--~gg~~~~~~~~~--~~~~~~~~~l~----~~gv~v~~g~~f~--~~~~iRi~~~~ 373 (394)
T PRK06836 325 KP--QGAFYLFPKSPE--EDDVAFCEKAK----KHNLLLVPGSGFG--CPGYFRLSYCV 373 (394)
T ss_pred cC--CceEEEEEeCCC--CCHHHHHHHHH----hCCEEEECchhcC--CCCeEEEEecC
Confidence 33 345444432221 35677777777 8999887652211 23579999864
No 117
>PRK09148 aminotransferase; Validated
Probab=99.90 E-value=8.2e-21 Score=187.33 Aligned_cols=332 Identities=14% Similarity=0.006 Sum_probs=211.2
Q ss_pred CCCCCccccccccCCC-hHHHHHHHHHHcCcC-CCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHH
Q 014163 53 DGNPRLNLASFVTTWM-EPECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAI 130 (429)
Q Consensus 53 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~ 130 (429)
.+++.++|..+.|+.+ ++.+.+.+.+.+... ...|....+..++++.+.+++.+.+|.+.+.. ..+++|+|+++++
T Consensus 28 ~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~--~~I~it~G~~~al 105 (405)
T PRK09148 28 AGADIIDLGMGNPDLPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPD--TQVVATLGSKEGF 105 (405)
T ss_pred cCCCeEEcCCCCCCCCCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--CcEEEcCChHHHH
Confidence 4555566777777543 455666666665432 33455556788999999999988778753321 1388999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCC-ccccCHHHHHHHhhhCCeEEEEe
Q 014163 131 MLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG-YYVMNPVKAVELVDENTICVAAI 209 (429)
Q Consensus 131 ~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~-~~~~d~~~l~~~i~~~~~~v~~~ 209 (429)
.+++.++++ .++.|++++++|..+...++..|+++..+|++.+ .+..+++++.+...+++++|+++
T Consensus 106 ~~~~~~l~~-------------~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~~~~~~v~l~ 172 (405)
T PRK09148 106 ANMAQAITA-------------PGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSIPKPIALIVN 172 (405)
T ss_pred HHHHHHhcC-------------CCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhccccceEEEEe
Confidence 998888754 2368999999999998888999999999998743 24344444444444678999999
Q ss_pred eCCCccccccCh---HHHHHHHHHhhhccCCCccEEeecccccccccccCCCCc--ccc-CCCCeeEEEEcCcccCC-CC
Q 014163 210 LGSTLTGEFEDV---KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE--WDF-RLPLVKSINVSGHKYGL-VY 282 (429)
Q Consensus 210 ~~~~~tG~~~~l---~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~-~~~~~d~~~~s~hK~~~-~p 282 (429)
+|+||||.+.+. ++|.++|++| ++++++|++|+.+.. ...... ..+ ......++..|..|.++ ++
T Consensus 173 ~P~NPtG~~~s~~~l~~l~~~a~~~------~~~ii~De~Y~~~~~--~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pG 244 (405)
T PRK09148 173 YPSNPTAYVADLDFYKDVVAFAKKH------DIIILSDLAYSEIYF--DGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAG 244 (405)
T ss_pred CCCCCCCcCCCHHHHHHHHHHHHHc------CeEEEEeccchhhhc--CCCCCCChhhCCCccCcEEEEeccccccCCcc
Confidence 999999999665 6888999999 999999999986431 110000 011 11123344566678664 88
Q ss_pred CCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHHHHHHHh
Q 014163 283 AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG--FEGYKNIMENCMGNARALREGLEK 360 (429)
Q Consensus 283 ~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~--~~g~~~~~~~~~~~~~~l~~~L~~ 360 (429)
.++||++.. ++.. +.+.....+... + .....+.++...+. ...+++..++..++++++.+.|++
T Consensus 245 lR~G~~v~~-~~~i-~~l~~~~~~~~~---------~---~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~ 310 (405)
T PRK09148 245 WRMGFAVGN-ERLI-AALTRVKSYLDY---------G---AFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGR 310 (405)
T ss_pred hheeeeeCC-HHHH-HHHHHHHHHhcc---------C---CChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999753 2222 222211111111 0 11223444444442 344567777888899999999998
Q ss_pred CCCeEEeeCCCCceEEEEEecCCC-CCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEecc
Q 014163 361 TGRFEILSKDVGVPLVAFSLKDSS-AHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHL 426 (429)
Q Consensus 361 ~~~~~~~~~~~~~~~v~f~~~~~~-~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~ 426 (429)
.+ +.+.. +....++.+++++.- ..+..++.+.|.+ ++|+.+.+.......+..++||++..
T Consensus 311 ~~-~~~~~-p~~g~f~~~~l~~~~~~~~~~~~~~~ll~---~~gV~v~pg~~f~~~~~~~~Ri~~~~ 372 (405)
T PRK09148 311 AG-WDIPP-PAASMFAWAPIPEAFRHLGSLEFSKLLVE---KADVAVAPGVGFGEHGDGYVRIALVE 372 (405)
T ss_pred cC-CccCC-CCeeEEEEEECCCccCCCCHHHHHHHHHH---hCCEEEeCchhhCCCCCCeEEEEecC
Confidence 75 65442 323334444553211 1244566665441 68999887521122234679999863
No 118
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.90 E-value=8.3e-21 Score=187.31 Aligned_cols=334 Identities=13% Similarity=0.008 Sum_probs=212.3
Q ss_pred CCCCCccccccccCCCh-HHHHHHHHHHcCc-CCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHH
Q 014163 53 DGNPRLNLASFVTTWME-PECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAI 130 (429)
Q Consensus 53 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~ 130 (429)
.+...++|..+.|.... +.+.+.+...... ....|....+..++++.+.+|+.+.+|.+.+.. ..+++|+|+++|+
T Consensus 31 ~~~~~~~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~--~~I~it~G~~~al 108 (403)
T PRK08636 31 AGEDIIDFSMGNPDGPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPE--TEVVATMGSKEGY 108 (403)
T ss_pred cCCCEEEcCCcCCCCCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--CeEEECCChHHHH
Confidence 34444667777766543 3345555444433 234566667888999999999999888764321 1388999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEecc-CCccccCHHHH----HHHhh---hC
Q 014163 131 MLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVMNPVKA----VELVD---EN 202 (429)
Q Consensus 131 ~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~-~~~~~~d~~~l----~~~i~---~~ 202 (429)
.+++.++++ .++.|++++++|+.+..+++..|++++.||++ ++++.+|++.+ +++++ .+
T Consensus 109 ~~~~~~l~~-------------~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~ 175 (403)
T PRK08636 109 VHLVQAITN-------------PGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPK 175 (403)
T ss_pred HHHHHHhCC-------------CCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHHHHHhhccCC
Confidence 999888765 23689999999999999999999999999985 33378998754 55554 36
Q ss_pred CeEEEEeeCCCcccccc---ChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCc--ccc-CCCCeeEEEEcCc
Q 014163 203 TICVAAILGSTLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE--WDF-RLPLVKSINVSGH 276 (429)
Q Consensus 203 ~~~v~~~~~~~~tG~~~---~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~-~~~~~d~~~~s~h 276 (429)
++++++++|+||||.+- .+++|.++|++| ++++++|++|+.+.. ...... ..+ .......++.|.-
T Consensus 176 ~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~------~~~II~De~Y~~l~~--~~~~~~~~~~~~~~~~~~i~~~S~S 247 (403)
T PRK08636 176 PKYVVVNFPHNPTTATVEKSFYERLVALAKKE------RFYIISDIAYADITF--DGYKTPSILEVEGAKDVAVESYTLS 247 (403)
T ss_pred ceEEEEeCCCCCCCccCCHHHHHHHHHHHHHc------CcEEEEeccchhhcc--CCCCCCChhcCCCccccEEEEEecc
Confidence 78999999999999984 467888899999 999999999987431 110000 011 1112223345677
Q ss_pred ccC-CCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Q 014163 277 KYG-LVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALR 355 (429)
Q Consensus 277 K~~-~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~ 355 (429)
|.+ .++.++||++.. ++.. ..+.....+... ++......++. .++.. ....+++..+...++++.+.
T Consensus 248 K~~~~~GlRiG~iv~~-~~li-~~~~~~~~~~~~--------~~~~~~q~~~~-~~~~~-~~~~~~~~~~~~~~~~~~l~ 315 (403)
T PRK08636 248 KSYNMAGWRVGFVVGN-KKLV-GALKKIKSWLDY--------GMFTPIQVAAT-IALDG-DQSCVEEIRETYRKRRDVLI 315 (403)
T ss_pred cccCCccceeeeeeCC-HHHH-HHHHHHHHHhcc--------cCChHHHHHHH-HHHhC-cHHHHHHHHHHHHHHHHHHH
Confidence 766 799999998753 2222 222211111111 11111122111 22221 23446667777888899999
Q ss_pred HHHHhCCCeEEeeCCCCceEEEEEecCCC-CCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEecc
Q 014163 356 EGLEKTGRFEILSKDVGVPLVAFSLKDSS-AHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHL 426 (429)
Q Consensus 356 ~~L~~~~~~~~~~~~~~~~~v~f~~~~~~-~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~ 426 (429)
+.|++.+ +.+..+. ....+.+++++.. ..+..++.+.|.+ +.|+.+.+.......+..++||+++.
T Consensus 316 ~~L~~~~-~~~~~p~-~g~~~~~~l~~~~~~~~~~~l~~~ll~---~~gV~v~pg~~f~~~~~~~iRi~~~~ 382 (403)
T PRK08636 316 ESFANAG-WELQKPR-ASMFVWAKIPEPARHLGSLEFSKQLLT---EAKVAVSPGIGFGEYGDEYVRIALIE 382 (403)
T ss_pred HHHHHCC-CcccCCC-cceEEEEECCCccCCCCHHHHHHHHHH---hCCEEEecchhhCcCCCCeEEEEecC
Confidence 9999875 6654332 3445555654311 2345677665431 68999876522222334689999974
No 119
>PRK07179 hypothetical protein; Provisional
Probab=99.89 E-value=2.2e-21 Score=191.75 Aligned_cols=304 Identities=12% Similarity=0.017 Sum_probs=198.0
Q ss_pred ChHHHHHHHHHHcCcCCCCC---ccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHH
Q 014163 68 MEPECDKLVMASINKNYVDM---DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (429)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~ 144 (429)
..|.+.+++.+.+...+.+. ...........++.+.+++++|.+. .++++||++|+..++.++..
T Consensus 69 ~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~-------~~~~~sG~~An~~~l~~l~~----- 136 (407)
T PRK07179 69 GHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTGFES-------CLLCQSGWAANVGLLQTIAD----- 136 (407)
T ss_pred CCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHhCC-----
Confidence 35778888877765421111 1111111233344456899999864 68899999999998887754
Q ss_pred HHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhh-CCeEEEEeeCCCccccccChHH
Q 014163 145 RKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKL 223 (429)
Q Consensus 145 ~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~tG~~~~l~~ 223 (429)
.++.|+++...|.++...++..|+++..++ ..|+++|++++++ ++++|++.+++|++|.+.|+++
T Consensus 137 --------~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~------~~d~~~l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~ 202 (407)
T PRK07179 137 --------PNTPVYIDFFAHMSLWEGVRAAGAQAHPFR------HNDVDHLRRQIERHGPGIIVVDSVYSTTGTIAPLAD 202 (407)
T ss_pred --------CCCEEEEECCcCHHHHHHHHHCCCeEEEec------CCCHHHHHHHHHhcCCeEEEECCCCCCCCccccHHH
Confidence 125788899999998888888887765432 2589999999987 4788889999999999999999
Q ss_pred HHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCC-CCeeEEEEcCcccCCCCCCeEEEEEeCCCCccccccc
Q 014163 224 LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRL-PLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVF 302 (429)
Q Consensus 224 I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~-~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~ 302 (429)
|.++|+++ |+++|+|++|+.+.........-..++. .++|+++.+.||++++ ++|+++.++ +.. +.+..
T Consensus 203 I~~l~~~~------~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g~--~~G~l~~~~-~~~-~~~~~ 272 (407)
T PRK07179 203 IVDIAEEF------GCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFAG--RAGIITCPR-ELA-EYVPF 272 (407)
T ss_pred HHHHHHHc------CCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhhc--cCeEEEeCH-HHH-HHHHH
Confidence 99999999 9999999999754321000000001222 3579999999998864 478887653 221 21111
Q ss_pred ccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecC
Q 014163 303 HINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKD 382 (429)
Q Consensus 303 ~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~ 382 (429)
. .+. ..+.+|.....+.++.++++.+.. ..+..++..++++++.+.|++++ +++.. ..+++.+.+..
T Consensus 273 ~-~~~------~~~~~t~~~~~~aa~~aal~~~~~--~~~~~~~l~~~~~~l~~~L~~~g-~~v~~---~~~i~~l~~~~ 339 (407)
T PRK07179 273 V-SYP------AIFSSTLLPHEIAGLEATLEVIES--ADDRRARLHANARFLREGLSELG-YNIRS---ESQIIALETGS 339 (407)
T ss_pred h-CcC------eeeCCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHcC-CCCCC---CCCEEEEEeCC
Confidence 0 000 011234433444445556655432 25677889999999999999984 76652 35677776532
Q ss_pred CCCCCHHHHHHHHHHHHhccCceeccc-CCCCCCCceEEEEEecc
Q 014163 383 SSAHTVFEISEGLRKKLNRFQVVYPQK-LPMSYPWSTKLRVISHL 426 (429)
Q Consensus 383 ~~~~~~~~~~~~L~~~l~~~G~~~~~~-~~~~~~~~~~lRi~~~~ 426 (429)
..+...+.+.|. ++|+.+..+ .|....+...+|++++.
T Consensus 340 --~~~~~~~~~~L~----~~GI~~~~~~~p~~~~~~~~lRis~~~ 378 (407)
T PRK07179 340 --ERNTEVLRDALE----ERNVFGAVFCAPATPKNRNLIRLSLNA 378 (407)
T ss_pred --HHHHHHHHHHHH----HCCceEeeecCCCCCCCCceEEEEECC
Confidence 113344555555 899986544 34333445789999974
No 120
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.89 E-value=2.8e-21 Score=188.63 Aligned_cols=292 Identities=10% Similarity=0.016 Sum_probs=198.2
Q ss_pred HHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHH-HHHHHHHHHhc
Q 014163 70 PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF-KRKWQQKRKEQ 148 (429)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~-~~~~~~~~~~~ 148 (429)
+...+++.+.+..++. ..+|...++|++ +++++|.+. .++++|||+|+.+++.++ ..
T Consensus 14 ~~e~~~~~~~l~~~~~--~~g~~~~~le~~----la~~~g~~~-------~v~~~sgt~al~lal~al~~~--------- 71 (379)
T PRK11658 14 DEELAAVKEVLRSGWI--TTGPKNQALEQA----FCQLTGNQH-------AIAVSSATAGMHITLMALGIG--------- 71 (379)
T ss_pred HHHHHHHHHHHHcCCc--cCCHhHHHHHHH----HHHHhCCCe-------EEEECCHHHHHHHHHHHcCCC---------
Confidence 3445666666665543 235666666655 788888864 788999999999998876 22
Q ss_pred CCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHH
Q 014163 149 GKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLL 228 (429)
Q Consensus 149 g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la 228 (429)
.+++|++++++|.+...++...|++++.++++++++.+|+++++++++++|++|+ +++++|...|+++|.++|
T Consensus 72 ----~Gd~Viv~~~~~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~~tkav~---~~~~~G~~~d~~~i~~~a 144 (379)
T PRK11658 72 ----PGDEVITPSLTWVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITPRTKAII---PVHYAGAPADLDAIRAIG 144 (379)
T ss_pred ----CCCEEEECCCcHHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcccCCeEEE---EeCCCCCcCCHHHHHHHH
Confidence 2368999999999999999999999999999876678999999999999998876 445689999999999999
Q ss_pred HHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCccccccccc--CC
Q 014163 229 TKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHI--NY 306 (429)
Q Consensus 229 ~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~--~~ 306 (429)
+++ |+++++|+||+.+.. ... ...+..++++++++++|.+.++. .|++++++++.. ..+.... .+
T Consensus 145 ~~~------gi~vi~D~a~a~g~~--~~~---~~~g~~g~~~~Sf~~~K~l~~g~-GG~v~~~~~~~~-~~~~~~~~~G~ 211 (379)
T PRK11658 145 ERY------GIPVIEDAAHAVGTY--YKG---RHIGARGTAIFSFHAIKNITCAE-GGLVVTDDDELA-DRLRSLKFHGL 211 (379)
T ss_pred HHc------CCeEEEECCCccCCe--ECC---eecCCCCCEEEeCCCCCcCcccC-ceEEEECCHHHH-HHHHHHHHcCC
Confidence 999 999999999985432 111 11222356889999999886644 355555444332 2221111 10
Q ss_pred CC--------CCCCCce--eccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC----C
Q 014163 307 LG--------SDQPTFT--LNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV----G 372 (429)
Q Consensus 307 ~~--------~~~~~~~--~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----~ 372 (429)
.. .....+. ..|+. ..+..+.+++.....+++++..++.+++++++.+.|++++...+..+.. .
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~G~n--~~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~ 289 (379)
T PRK11658 212 GVDAFDRQTQGRAPQAEVLTPGYK--YNLADINAAIALVQLAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHA 289 (379)
T ss_pred CcchhhhhcccCCCcceeeccccc--cCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCcee
Confidence 00 0000000 11222 1233455666655667899999999999999999999887332322211 1
Q ss_pred ceEEEEEecCC-CCCCHHHHHHHHHHHHhccCceeccc
Q 014163 373 VPLVAFSLKDS-SAHTVFEISEGLRKKLNRFQVVYPQK 409 (429)
Q Consensus 373 ~~~v~f~~~~~-~~~~~~~~~~~L~~~l~~~G~~~~~~ 409 (429)
..++++++... .+.+.+++.+.|. ++||.+..+
T Consensus 290 ~~~~~~~~~~~~~~~~r~~~~~~L~----~~gI~~~~~ 323 (379)
T PRK11658 290 WHLFIIRVDEERCGISRDALMEALK----ERGIGTGLH 323 (379)
T ss_pred EEEEEEEECCccccCCHHHHHHHHH----HCCCCCccc
Confidence 24566776431 1356778888887 899876644
No 121
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.89 E-value=3e-21 Score=187.00 Aligned_cols=305 Identities=16% Similarity=0.053 Sum_probs=200.6
Q ss_pred hHHHHHHHHHHcCcCCCC---CccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHH
Q 014163 69 EPECDKLVMASINKNYVD---MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (429)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~ 145 (429)
+|++.+++..++.+...+ +....+.....+++++.+++++|.+. .+++++|++++..++.++..
T Consensus 17 ~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~-------~iv~~sg~~a~~~~~~~~~~------ 83 (349)
T cd06454 17 HPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFHGKEA-------ALVFSSGYAANDGVLSTLAG------ 83 (349)
T ss_pred CHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHhCCCC-------EEEeccHHHHHHHHHHHhcC------
Confidence 477888888887642221 11122455666678888999999853 56777788898877776643
Q ss_pred HhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhh-----CCeEEEEeeCCCccccccC
Q 014163 146 KEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-----NTICVAAILGSTLTGEFED 220 (429)
Q Consensus 146 ~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~-----~~~~v~~~~~~~~tG~~~~ 220 (429)
.+++|+++++.|.++...++..|++++.++. +|++++++++++ ++++|++++++|++|.+.|
T Consensus 84 -------~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~------~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~ 150 (349)
T cd06454 84 -------KGDLIISDSLNHASIIDGIRLSGAKKRIFKH------NDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAP 150 (349)
T ss_pred -------CCCEEEEehhhhHHHHHHHHHcCCceEEecC------CCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccC
Confidence 1358999999999988888889999887752 577888888875 4678888899999999999
Q ss_pred hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCC-ccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccc
Q 014163 221 VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-EWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDE 299 (429)
Q Consensus 221 l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~ 299 (429)
+++|+++|+++ ++++|+|++|+.+......... ..+....+.|++..+.||+++. .| |+++.+ ++.. +.
T Consensus 151 ~~~i~~~~~~~------~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~g-G~i~~~-~~~~-~~ 220 (349)
T cd06454 151 LPELVDLAKKY------GAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGA-VG-GYIAGS-KELI-DY 220 (349)
T ss_pred HHHHHHHHHHc------CCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcc-cC-CEEECC-HHHH-HH
Confidence 99999999999 9999999999743321110000 1111223689999999998765 44 666543 2222 11
Q ss_pred cccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEE
Q 014163 300 LVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFS 379 (429)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~ 379 (429)
+..... .+...++.+....+++.++++.+.. +++..++..++++++.+.|++.+ ++++.++ ...++++.
T Consensus 221 ~~~~~~-------~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~g-~~~~~~~-~~~~~~~~ 289 (349)
T cd06454 221 LRSYAR-------GFIFSTSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLKELG-FPVGGSP-SHIIPPLI 289 (349)
T ss_pred HHHhch-------hhhccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcC-CcccCCC-CCcEEEEe
Confidence 111110 0111123333445556666655533 46677888999999999999875 7766543 33444444
Q ss_pred ecCCCCCCHHHHHHHHHHHHhccCceeccc-CCCCCCCceEEEEEecc
Q 014163 380 LKDSSAHTVFEISEGLRKKLNRFQVVYPQK-LPMSYPWSTKLRVISHL 426 (429)
Q Consensus 380 ~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~-~~~~~~~~~~lRi~~~~ 426 (429)
..+ +.+..++.+.|. ++|+.++.. .+....+...+|++++.
T Consensus 290 ~~~--~~~~~~~~~~L~----~~gI~~~~~~~~~~~~~~~~iRi~~~~ 331 (349)
T cd06454 290 GDD--PAKAVAFSDALL----ERGIYVQAIRYPTVPRGTARLRISLSA 331 (349)
T ss_pred CCC--hHHHHHHHHHHH----hCCceEEEecCCccCCCCCeEEEEEeC
Confidence 321 234566777776 889998753 22222234679999863
No 122
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.89 E-value=3.6e-21 Score=182.30 Aligned_cols=289 Identities=14% Similarity=0.049 Sum_probs=208.0
Q ss_pred HHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcC
Q 014163 70 PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQG 149 (429)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g 149 (429)
....+++.+.+..++.. .++...++|++ +++++|++. .+.+++||.|+.++++++.-.
T Consensus 15 ~~e~~~v~~vl~sg~i~--~G~~v~~FE~~----~ae~~G~k~-------ava~~sgT~AL~laL~al~ig--------- 72 (374)
T COG0399 15 EEELAAVQEVLKSGWLT--GGPFVRRFEQA----FAEYLGVKY-------AVAVSSGTAALHLALLALAIG--------- 72 (374)
T ss_pred hHHHHHHHHHHHcCCee--cChHHHHHHHH----HHHHhCCCe-------EEEecChHHHHHHHHHhcCCC---------
Confidence 44677888888887764 37888888865 899999986 899999999999999976411
Q ss_pred CCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHH
Q 014163 150 KPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLT 229 (429)
Q Consensus 150 ~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~ 229 (429)
.+++||+|+.++.+..+++-+.|+++++|++|++++.||++.+|++|+++|++|+. .+..|...|+++|.++|+
T Consensus 73 ---~GDeVI~ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~tKAIip---Vhl~G~~~dm~~i~~la~ 146 (374)
T COG0399 73 ---PGDEVIVPSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPRTKAIIP---VHLAGQPCDMDAIMALAK 146 (374)
T ss_pred ---CCCEEEecCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccCCeEEEE---ehhccCCCCHHHHHHHHH
Confidence 23699999999999999999999999999999888999999999999999999864 456799999999999999
Q ss_pred HhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCC
Q 014163 230 KKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGS 309 (429)
Q Consensus 230 ~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~ 309 (429)
+| |++|+.|+||+.+.. .....-. .+..+-+++|.+.|.+.+. ..|.+++++++ +.+.......+-..
T Consensus 147 ~~------~l~vIEDaAqa~Ga~--y~gk~vG--t~Gd~~~fSF~~~K~ittg-EGGav~tnd~e-la~k~~~lr~hG~~ 214 (374)
T COG0399 147 RH------GLPVIEDAAQAHGAT--YKGKKVG--SFGDIGAFSFHATKNLTTG-EGGAVVTNDEE-LAEKARSLRNHGLS 214 (374)
T ss_pred Hc------CCeEEEEcchhccCe--ecCcccc--cccceEEEEecCCCCcccc-CceEEEeCCHH-HHHHHHHHHHhCcC
Confidence 99 999999999987653 2222111 2345889999999998776 44666665543 33322221111111
Q ss_pred C----CCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCC----ceEEEEEec
Q 014163 310 D----QPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVG----VPLVAFSLK 381 (429)
Q Consensus 310 ~----~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~----~~~v~f~~~ 381 (429)
. .......|.. .++-.+.+++.....+.++++.++.+++++++.+.|++++++.+...+.. ...+.++++
T Consensus 215 ~~~~~~y~~~~~G~N--~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~ 292 (374)
T COG0399 215 RDAVFKYLHEELGYN--YRLTEIQAAIGLAQLERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVD 292 (374)
T ss_pred CCccccceeeecccc--cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEec
Confidence 1 0001111222 23334455555455577899999999999999999999876555443321 335555554
Q ss_pred CCCCCCHHHHHHHHHHHHhccCce
Q 014163 382 DSSAHTVFEISEGLRKKLNRFQVV 405 (429)
Q Consensus 382 ~~~~~~~~~~~~~L~~~l~~~G~~ 405 (429)
+. +.+-+.+...|. ++|+.
T Consensus 293 ~~-~~~R~~l~~~L~----~~gi~ 311 (374)
T COG0399 293 EE-GISRDALMESLK----EAGVG 311 (374)
T ss_pred CC-CCCHHHHHHHHH----hCCCC
Confidence 33 356667777777 88776
No 123
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.89 E-value=2.3e-21 Score=188.02 Aligned_cols=287 Identities=13% Similarity=0.062 Sum_probs=188.1
Q ss_pred HHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCC
Q 014163 75 LVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDK 154 (429)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~ 154 (429)
++...+..... ...+...++|+ .+++++|.+. .+++++||+|+..++.++... .+
T Consensus 4 ~~~~~~~~~~~--~~~~~~~~~~~----~la~~~~~~~-------~~~~~sgt~al~~~l~~l~~~------------~g 58 (352)
T cd00616 4 AVEEVLDSGWL--TLGPKVREFEK----AFAEYLGVKY-------AVAVSSGTAALHLALRALGIG------------PG 58 (352)
T ss_pred HHHHHHHcCCc--cCCHHHHHHHH----HHHHHhCCCe-------EEEECCHHHHHHHHHHHcCCC------------CC
Confidence 34444444332 33455555554 5888888753 778899999999888876311 23
Q ss_pred cEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhc
Q 014163 155 PNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEE 234 (429)
Q Consensus 155 ~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~ 234 (429)
++|+++.++|.+...++...|++++.++++++++.+|++++++++++++++|++++ ++|.+.|+++|.++|+++
T Consensus 59 d~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~---~~G~~~~~~~i~~l~~~~--- 132 (352)
T cd00616 59 DEVIVPSFTFVATANAILLLGATPVFVDIDPDTYNIDPELIEAAITPRTKAIIPVH---LYGNPADMDAIMAIAKRH--- 132 (352)
T ss_pred CEEEeCCcchHHHHHHHHHcCCeEEEEecCCCcCCcCHHHHHHhcCcCCeEEEEEC---CCCCcCCHHHHHHHHHHc---
Confidence 68999999999999999999999999999864588999999999988899888764 689999999999999999
Q ss_pred cCCCccEEeecccccccccccCCCCccccC-CCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCC--
Q 014163 235 TGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQ-- 311 (429)
Q Consensus 235 ~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~-- 311 (429)
++++++|++|+.+.. .... .++ ...+++++++.||++.++. .|++++++++.. +.+.....+.....
T Consensus 133 ---~i~li~D~a~~~g~~--~~~~---~~~~~~d~~~~S~~~~K~~~~~~-gg~~~~~~~~~~-~~~~~~~~~~~~~~~~ 202 (352)
T cd00616 133 ---GLPVIEDAAQALGAT--YKGR---KVGTFGDAGAFSFHPTKNLTTGE-GGAVVTNDEELA-ERARLLRNHGRDRDRF 202 (352)
T ss_pred ---CCeEEEECCCCCCCe--ECCE---EcccCcceeEEcCCCCCCCcccC-ceEEEECCHHHH-HHHHHHHHcCCCCCCC
Confidence 999999999975432 1111 111 1124444445679985444 366666544332 11111100000000
Q ss_pred --CCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC----CceEEEEEecCCCC
Q 014163 312 --PTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV----GVPLVAFSLKDSSA 385 (429)
Q Consensus 312 --~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----~~~~v~f~~~~~~~ 385 (429)
..... +.......+....++ ...+++++..++.+++++++.+.|+++++++++.+++ ...+++|.+.+..+
T Consensus 203 ~~~~~~~-~~~~~~~~~~aa~~~--~~l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (352)
T cd00616 203 KYEHEIL-GYNYRLSEIQAAIGL--AQLEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAG 279 (352)
T ss_pred cccccee-eeccCcCHHHHHHHH--HHHHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcCC
Confidence 00000 111111222222222 2335567888889999999999999998898876532 24678888753214
Q ss_pred CCHHHHHHHHHHHHhccCceeccc
Q 014163 386 HTVFEISEGLRKKLNRFQVVYPQK 409 (429)
Q Consensus 386 ~~~~~~~~~L~~~l~~~G~~~~~~ 409 (429)
.+..++.+.|. ++||.+..+
T Consensus 280 ~~~~~v~~~L~----~~gI~~~~~ 299 (352)
T cd00616 280 ESRDELIEALK----EAGIETRVH 299 (352)
T ss_pred CCHHHHHHHHH----HCCCCeeee
Confidence 57788888888 899977654
No 124
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.89 E-value=9.3e-21 Score=186.91 Aligned_cols=330 Identities=14% Similarity=0.017 Sum_probs=216.5
Q ss_pred CCCCccccccccCCC-hHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHH
Q 014163 54 GNPRLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIML 132 (429)
Q Consensus 54 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~ 132 (429)
++..+++..+.|..+ ++.+.+++...+......|....+..++++.+.+++++.+|.+.+. ..+++|+|+++|+..
T Consensus 32 ~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~---~~i~~t~G~~~al~~ 108 (402)
T PRK06107 32 GRSIVDLTVGEPDFDTPDHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYAD---NEITVGGGAKQAIFL 108 (402)
T ss_pred cCCEEEcCCCCCCCCCCHHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh---hhEEEeCCHHHHHHH
Confidence 444466777777654 4667788777776544556666688899999999999988986432 238899999999998
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEecc-CCccccCHHHHHHHhhhCCeEEEEeeC
Q 014163 133 AGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVMNPVKAVELVDENTICVAAILG 211 (429)
Q Consensus 133 al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~-~~~~~~d~~~l~~~i~~~~~~v~~~~~ 211 (429)
++.+... .++.|++++++|..+..++...|..+..++++ ++++.+|+++|++++.+++++|++++|
T Consensus 109 ~~~~~~~-------------~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p 175 (402)
T PRK06107 109 ALMATLE-------------AGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITPRTRWLILNAP 175 (402)
T ss_pred HHHHhcC-------------CCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCcCceEEEEECC
Confidence 8876543 23689999999888888888888888888886 344789999999999888999999999
Q ss_pred CCccccccC---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc--cc--CCCCeeEEEEcCcccCC-CCC
Q 014163 212 STLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW--DF--RLPLVKSINVSGHKYGL-VYA 283 (429)
Q Consensus 212 ~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~--~~--~~~~~d~~~~s~hK~~~-~p~ 283 (429)
+||||.+.+ +++|+++|+++. ++++++|++|+.+. |....... .+ ....-..+..|.+|.++ ++.
T Consensus 176 ~NPtG~~~s~~~~~~l~~~a~~~~-----~~~iI~De~y~~l~--~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGl 248 (402)
T PRK06107 176 SNPTGAVYSRAELRALADVLLRHP-----HVLVLTDDIYDHIR--FDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGW 248 (402)
T ss_pred CCCCCcCcCHHHHHHHHHHHHHcC-----CeEEEEehhccccc--cCCCCCCCHHHhCcCccCCEEEEeccchhhcCccc
Confidence 999998854 577788888852 79999999998632 11111110 00 11112334446688764 788
Q ss_pred CeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHc--CHHHHHHHHHHHHHHHHHHHHHHHhC
Q 014163 284 GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEGYKNIMENCMGNARALREGLEKT 361 (429)
Q Consensus 284 g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l--~~~g~~~~~~~~~~~~~~l~~~L~~~ 361 (429)
++||++... + +.+.+.....+... + ...+.+.++...+ +...+++..+...++++.+.+.|+++
T Consensus 249 RiG~~~~~~-~-~~~~~~~~~~~~~~---------~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~ 314 (402)
T PRK06107 249 RIGYAAGPA-D-LIAAINKLQSQSSS---------C---PSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAI 314 (402)
T ss_pred ceeeeecCH-H-HHHHHHHHHHhccc---------C---CChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 899987532 2 22222211111111 1 2233455555544 33445667777888899999999988
Q ss_pred CCeEEeeCCCCceEEEE-EecC------CCC---CCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 362 GRFEILSKDVGVPLVAF-SLKD------SSA---HTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 362 ~~~~~~~~~~~~~~v~f-~~~~------~~~---~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
+++.+..+ ..+++.| ++.+ +.+ .+..++...|. .++|+.+.+..... ...++|++++.+
T Consensus 315 ~g~~~~~p--~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~gv~v~pg~~Fg--~~~~iRis~~~~ 383 (402)
T PRK06107 315 PGLSCLVP--DGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLL---DSAGVAVVQGTAYG--LSPYFRLSIATS 383 (402)
T ss_pred CCCcccCC--CcceEEeeecccccccccccccCCCCHHHHHHHHH---HhCCEEEeCccccC--CCCeEEEEeCCC
Confidence 66665533 3555544 3311 111 13455555443 27899988652211 235799999863
No 125
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.89 E-value=5.2e-21 Score=185.40 Aligned_cols=308 Identities=15% Similarity=0.133 Sum_probs=201.5
Q ss_pred ccccccccC-CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHH
Q 014163 58 LNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (429)
Q Consensus 58 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a 136 (429)
++|....+. .+++.+.+++.+.+.. ...|. .++..+ +++.++++++++++ .+++|+|+++++..++.+
T Consensus 22 ~~l~~~~~~~~~p~~~~~a~~~~~~~-~~~Y~-~~~~~~----lr~~ia~~~~~~~~-----~i~it~Ga~~~l~~~~~~ 90 (354)
T PRK06358 22 LDFSANINPLGVPESLKQAITENLDK-LVEYP-DPDYLE----LRKRIASFEQLDLE-----NVILGNGATELIFNIVKV 90 (354)
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHHh-hhcCC-CccHHH----HHHHHHHHhCCChh-----hEEECCCHHHHHHHHHHH
Confidence 445444443 2346677777665532 22232 233444 44556777787653 389999999999888776
Q ss_pred HHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccC-CccccCHHHHHHHhhhCCeEEEEeeCCCcc
Q 014163 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLT 215 (429)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~~~~~t 215 (429)
+ . .+.|+++.++|..+..+++..|++++.+++++ +++.+| +++.+.+..++++|++++|+|||
T Consensus 91 ~-~--------------~~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~v~~~~P~NPt 154 (354)
T PRK06358 91 T-K--------------PKKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKEEIDLVFLCNPNNPT 154 (354)
T ss_pred h-C--------------CCcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhccCCCEEEEeCCCCCC
Confidence 4 2 13689999999999999999999999999874 346899 66667777778999999999999
Q ss_pred ccccC---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCc-c-cc-CCCCeeEEEEcCccc-CCCCCCeEEE
Q 014163 216 GEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-W-DF-RLPLVKSINVSGHKY-GLVYAGVGWV 288 (429)
Q Consensus 216 G~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~-~~-~~~~~d~~~~s~hK~-~~~p~g~g~l 288 (429)
|.+.+ +++|.++|+++ ++++++|++|..+.. ...... . .. ...++-++. |.-|. ++++.++||+
T Consensus 155 G~~~~~~~~~~l~~~a~~~------~~~ii~De~Y~~~~~--~~~~~~~~~~~~~~~~vi~~~-S~SK~~gl~G~RiG~l 225 (354)
T PRK06358 155 GQLISKEEMKKILDKCEKR------NIYLIIDEAFMDFLE--ENETISMINYLENFKNLIIIR-AFTKFFAIPGLRLGYG 225 (354)
T ss_pred CCccCHHHHHHHHHHHHhc------CCEEEEeCcccccCC--CccchhHHHhccCCCCEEEEE-echhhccCcchhheee
Confidence 99865 78888889999 999999999986431 110000 0 01 113444444 45555 4599999999
Q ss_pred EEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHH-HHHHHHHHHHHHHHHHHHHHHhCCCeEEe
Q 014163 289 VWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFE-GYKNIMENCMGNARALREGLEKTGRFEIL 367 (429)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~-g~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 367 (429)
+..++... ..+..... .+ + ...++++++...+... -+++..+...+.++++.+.|++++++.+.
T Consensus 226 v~~~~~~~-~~~~~~~~-------~~----~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~ 290 (354)
T PRK06358 226 LTSNKNLA-EKLLQMRE-------PW----S---INTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVY 290 (354)
T ss_pred ecCCHHHH-HHHHHhCC-------CC----c---chHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEc
Confidence 76433221 21111100 11 1 2344555555555433 34777788888999999999998766655
Q ss_pred eCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 368 SKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 368 ~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
. + ..+.+.+++++ ..++.+.|. ++|+.+.........+..++||+++.+
T Consensus 291 ~-~-~g~f~~~~~~~-----~~~~~~~l~----~~gI~v~~~~~f~~~~~~~iRls~~~~ 339 (354)
T PRK06358 291 K-P-SVNFIFFKLEK-----PIDLRKELL----KKGILIRSCSNYRGLDENYYRVAVKSR 339 (354)
T ss_pred C-C-cceEEEEEcCc-----hHHHHHHHH----HCCeEEEECCCCCCCCCCEEEEEeCCH
Confidence 3 3 45666666532 256777777 899998876221122346799999864
No 126
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=5.4e-21 Score=185.59 Aligned_cols=308 Identities=15% Similarity=0.113 Sum_probs=206.8
Q ss_pred ccccccccCC-ChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHH
Q 014163 58 LNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (429)
Q Consensus 58 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a 136 (429)
++|..+.++. +++.+.+++.+++......|. .++.. ++++.++++++++++ .+++|+|+++++.+++.+
T Consensus 27 i~l~~~~~~~~~~~~~~~a~~~~~~~~~~~y~-~~~~~----~lr~aia~~~~~~~~-----~I~it~G~~~al~~~~~~ 96 (353)
T PRK05387 27 IKLNTNENPYPPSPKVLEAIRAALGDDLRLYP-DPNAD----ALRQAIAAYYGLDPE-----QVFVGNGSDEVLAHAFLA 96 (353)
T ss_pred eeccCCCCCCCCCHHHHHHHHHHhhhhhhcCC-CCcHH----HHHHHHHHHhCCCHH-----HEEEcCCHHHHHHHHHHH
Confidence 4556666554 356688888776654333332 23334 455667777887652 389999999999999988
Q ss_pred HHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccc
Q 014163 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (429)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG 216 (429)
+.+ .+++|++++++|..+...++..|++++.+|++++ +.+|++++++ .+++|++++|+||||
T Consensus 97 l~~-------------~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~----~~~~v~~~~P~NPtG 158 (353)
T PRK05387 97 FFN-------------HDRPLLFPDITYSFYPVYAGLYGIPYEEIPLDDD-FSIDVEDYLR----PNGGIIFPNPNAPTG 158 (353)
T ss_pred hcC-------------CCCEEEEeCCCHHHHHHHHHHcCCEEEEeecCCC-CCCCHHHHHh----cCCEEEEeCCCCCCC
Confidence 765 2368999999999899889999999999999765 7899999874 457889999999999
Q ss_pred cccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccC-CCCCCeEEEEEeCCCC
Q 014163 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYG-LVYAGVGWVVWRTKDD 295 (429)
Q Consensus 217 ~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~-~~p~g~g~l~~~~~~~ 295 (429)
.+.+.+++.++++.+. ++++++|++|+.+.. ...........-..+..+..|.+ +++.++|+++.. ++.
T Consensus 159 ~~~~~~~~~~l~~~~~-----~~~livDe~y~~~~~----~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~-~~~ 228 (353)
T PRK05387 159 IALPLAEIERILAANP-----DSVVVIDEAYVDFGG----ESAIPLIDRYPNLLVVQTFSKSRSLAGLRVGFAIGH-PEL 228 (353)
T ss_pred CCCCHHHHHHHHHhCC-----CcEEEEeCcccccCC----cchHHHHhhCCCEEEEEehhHhhcchhhhceeeecC-HHH
Confidence 9999999999998752 899999999965321 10000011112246677788865 477899998753 322
Q ss_pred cccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCce
Q 014163 296 LPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-FEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVP 374 (429)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~-~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~ 374 (429)
. +.+....... .. .+ .....+.++...+. .+.+++..++..++++++.+.|++.+ +++. ++ ..+
T Consensus 229 ~-~~l~~~~~~~----~~----~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~-~~-~~~ 293 (353)
T PRK05387 229 I-EALNRVKNSF----NS----YP---LDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEALG-FEVL-PS-KAN 293 (353)
T ss_pred H-HHHHHhhccC----CC----CC---cCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-CeEC-CC-cCc
Confidence 2 2221111100 00 11 12334444444443 34567788888899999999999985 7654 32 455
Q ss_pred EEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 375 LVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 375 ~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
++.++.+ +.+..++.+.|. ++|+.++.+... ....++|+++++.
T Consensus 294 ~~~~~~~---~~~~~~~~~~l~----~~gi~v~~~~~~--~~~~~iRis~~~~ 337 (353)
T PRK05387 294 FVFARHP---SHDAAELAAKLR----ERGIIVRHFNKP--RIDQFLRITIGTD 337 (353)
T ss_pred EEEEECC---CCCHHHHHHHHH----HCCEEEEECCCC--CCCCeEEEEeCCH
Confidence 5555543 346677888887 899998754222 2346799999753
No 127
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.89 E-value=1.8e-20 Score=172.45 Aligned_cols=329 Identities=13% Similarity=0.072 Sum_probs=233.2
Q ss_pred ccccccccCCC-hHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHH
Q 014163 58 LNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (429)
Q Consensus 58 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a 136 (429)
..++.-..+++ +|.+.+++.+.++...+.|. -...++-+++..|.++..+..... .+..++.|.--++.+++.+
T Consensus 28 lPmWVADMDf~~pp~i~~Al~~rvdhGvfGY~--~~~~~~~~ai~~w~~~r~~~~i~~---e~i~~~p~VVpgi~~~I~~ 102 (388)
T COG1168 28 LPMWVADMDFPTPPEIIEALRERVDHGVFGYP--YGSDELYAAIAHWFKQRHQWEIKP---EWIVFVPGVVPGISLAIRA 102 (388)
T ss_pred ceeeeecccCCCCHHHHHHHHHHHhcCCCCCC--CCCHHHHHHHHHHHHHhcCCCCCc---ceEEEcCcchHhHHHHHHH
Confidence 33444444454 57799999999988776665 345667789999999999987643 4588899999999888888
Q ss_pred HHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEecc--CCccccCHHHHHHHhhhC-CeEEEEeeCCC
Q 014163 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE--EGYYVMNPVKAVELVDEN-TICVAAILGST 213 (429)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~--~~~~~~d~~~l~~~i~~~-~~~v~~~~~~~ 213 (429)
+.. .++.|++..|.|+.+.++.+..|-++...|+. .+.+.||.++||+++.+. +++.++|+|+|
T Consensus 103 ~T~-------------~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHN 169 (388)
T COG1168 103 LTK-------------PGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHN 169 (388)
T ss_pred hCc-------------CCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCC
Confidence 765 23679999999999999999999999999975 334788999999998875 58999999999
Q ss_pred ccccc---cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcccc---C---CCCeeEEEEcCcccCCCCCC
Q 014163 214 LTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF---R---LPLVKSINVSGHKYGLVYAG 284 (429)
Q Consensus 214 ~tG~~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~---~---~~~~d~~~~s~hK~~~~p~g 284 (429)
|+|.+ +.+.+|.++|++| |+.|++|+.|+.... .+.....+ . ...+-.++..++-|-.++..
T Consensus 170 P~Grvwt~eeL~~i~elc~kh------~v~VISDEIHaDlv~---~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~ 240 (388)
T COG1168 170 PTGRVWTKEELRKIAELCLRH------GVRVISDEIHADLVL---GGHKHIPFASLSERFADNSITLTSASKTFNLAGLK 240 (388)
T ss_pred CCCccccHHHHHHHHHHHHHc------CCEEEeecccccccc---cCCCccchhhcChhhhcceEEEeeccccccchhhh
Confidence 99998 7899999999999 999999999987442 11111111 1 12233333334556677788
Q ss_pred eEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHh-CCC
Q 014163 285 VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEK-TGR 363 (429)
Q Consensus 285 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~-~~~ 363 (429)
++.++..+++...+ +......... +..+...+.+.- +.-.-|.+.+.+..+....+++++.+.|.+ +|+
T Consensus 241 ~a~~Ii~n~~lr~~-~~~~l~~~~~--------~~~n~lg~~A~~-aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~ 310 (388)
T COG1168 241 CAYIIISNRELRAK-FLKRLKRNGL--------HGPSALGIIATE-AAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPG 310 (388)
T ss_pred heeEEecCHHHHHH-HHHHHHHhcC--------CCCchHHHHHHH-HHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 88888877643211 1111111111 222223333222 223347888999999999999999999985 588
Q ss_pred eEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEecccc
Q 014163 364 FEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLRR 428 (429)
Q Consensus 364 ~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~~ 428 (429)
+++..+. ..-+.-+.++.- +.+..++.+.|.+ +.++.+.......-.|.+++|+-++.+|
T Consensus 311 v~v~~p~-gTYL~WLD~r~l-~l~d~~l~~~ll~---~akVal~~G~~FG~~g~gf~RlN~acpr 370 (388)
T COG1168 311 VKVTEPQ-GTYLAWLDCREL-GLDDSELAEFLLE---EAKVALSPGSTFGEEGSGFVRLNFACPR 370 (388)
T ss_pred cEEecCC-Cceeeeeecccc-CCChHHHHHHHHH---hhcEeccCCCccCcCCCceEEEecCCCH
Confidence 9888664 455666666543 4566778887773 5567776554444566788999998776
No 128
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.89 E-value=5.4e-21 Score=188.60 Aligned_cols=320 Identities=17% Similarity=0.077 Sum_probs=205.0
Q ss_pred CCCCCccccccc-cCC-ChHHHHHHHHHHcCcCCCCCc---cChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCch
Q 014163 53 DGNPRLNLASFV-TTW-MEPECDKLVMASINKNYVDMD---EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS 127 (429)
Q Consensus 53 ~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t 127 (429)
.++..++|.++. +++ ++|.+.+++...+..+...+. ...+..++.+++.+++++++|.+. ...+|+ |+
T Consensus 40 ~g~~~i~l~~~~~~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~~~------~i~~ts-G~ 112 (397)
T PRK06939 40 DGKEVINFCANNYLGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGTED------AILYSS-CF 112 (397)
T ss_pred CCCeEEEeeccCccccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCCCc------EEEEcC-hH
Confidence 355556666655 344 456788877777755322222 234667888899999999999752 244555 48
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhh------
Q 014163 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE------ 201 (429)
Q Consensus 128 ~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~------ 201 (429)
+++..++.++.+ .+++|++++++|+++...++..|.++..++. .|++++++.+++
T Consensus 113 ~a~~~~~~~l~~-------------~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~l~~~i~~~~~~~~ 173 (397)
T PRK06939 113 DANGGLFETLLG-------------KEDAIISDALNHASIIDGVRLCKAKRYRYAN------NDMADLEAQLKEAKEAGA 173 (397)
T ss_pred HHHHHHHHHhCC-------------CCCEEEEEhhhhHHHHHHHHhcCCceEEeCC------CCHHHHHHHHHhhhccCC
Confidence 888877766543 2368999999999999988999988776653 578888888864
Q ss_pred CCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccC-CCCeeEEEEcCcccCC
Q 014163 202 NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGL 280 (429)
Q Consensus 202 ~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~d~~~~s~hK~~~ 280 (429)
++++|+..+..+++|.+.++++|.++|++| ++|+++|++|+.+.............+ .+++|+++.+.+|++.
T Consensus 174 ~~~~v~~~~v~~~~G~~~~~~~l~~la~~~------~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~ 247 (397)
T PRK06939 174 RHKLIATDGVFSMDGDIAPLPEICDLADKY------DALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALG 247 (397)
T ss_pred CCeEEEEecCcCCCCCcCCHHHHHHHHHHh------CCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhC
Confidence 567777766788999999999999999999 999999999963222110000000111 1257899999999985
Q ss_pred CCCCeEEEEEeCCCCcccccccc-cCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHH
Q 014163 281 VYAGVGWVVWRTKDDLPDELVFH-INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLE 359 (429)
Q Consensus 281 ~p~g~g~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~ 359 (429)
++ +.||++.+. +.. +.+... ..+. +.++.......++.++++.+.. .++..++..++++++.+.|+
T Consensus 248 g~-r~G~v~~~~-~~~-~~l~~~~~~~~--------~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~ 314 (397)
T PRK06939 248 GA-SGGYTAGRK-EVI-DWLRQRSRPYL--------FSNSLAPAIVAASIKVLELLEE--SDELRDRLWENARYFREGMT 314 (397)
T ss_pred cc-CceEEEeCH-HHH-HHHHHhCcccc--------ccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHH
Confidence 54 678887643 222 222111 1111 1123222233344445554422 25677888899999999999
Q ss_pred hCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceeccc-CCCCCCCceEEEEEecc
Q 014163 360 KTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK-LPMSYPWSTKLRVISHL 426 (429)
Q Consensus 360 ~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~-~~~~~~~~~~lRi~~~~ 426 (429)
+.+ +++.. + ..+++.+.+.+ ..+..++.+.|. ++|+.+... ++....+..++|++++.
T Consensus 315 ~~~-~~~~~-~-~~~~~~~~~~~--~~~~~~~~~~L~----~~gI~v~~~~~~~~~~~~~~iRi~~~~ 373 (397)
T PRK06939 315 AAG-FTLGP-G-EHPIIPVMLGD--AKLAQEFADRLL----EEGVYVIGFSFPVVPKGQARIRTQMSA 373 (397)
T ss_pred HcC-CCcCC-C-CCCEEEEEECC--HHHHHHHHHHHH----HCCceEeeeCCCCCCCCCceEEEEECC
Confidence 875 66543 2 34555444422 234456666666 889987643 32222345679998753
No 129
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=8.4e-22 Score=190.71 Aligned_cols=273 Identities=14% Similarity=0.095 Sum_probs=188.4
Q ss_pred HHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCcee
Q 014163 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVEL 178 (429)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v 178 (429)
++++++++.+|++++ .+.+|+|+++++.+++.++... +++.|+++.++|..+...++..|+++
T Consensus 61 ~l~~~~a~~~g~~~~-----~I~~~~Gs~e~i~~~~~~~~~~------------g~~~vli~~P~y~~y~~~~~~~G~~~ 123 (351)
T PRK01688 61 AVIENYAAYAGVKPE-----QVLVSRGADEGIELLIRAFCEP------------GKDAILYCPPTYGMYSVSAETIGVEI 123 (351)
T ss_pred HHHHHHHHHhCCCHH-----HEEEcCCHHHHHHHHHHHhcCC------------CCCEEEEcCCCHHHHHHHHHHcCCEE
Confidence 666779999999763 4889999999999988876541 12579999999999999999999999
Q ss_pred EEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCC
Q 014163 179 KEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD 258 (429)
Q Consensus 179 ~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~ 258 (429)
+.+|++++ +.+|++++++++ +++++|++++|+||||.+.+.++|.++++...+ ++++++|+||..+.. ..
T Consensus 124 ~~v~~~~~-~~~d~~~l~~~~-~~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~----~~~vivDEay~~f~~----~~ 193 (351)
T PRK01688 124 RTVPTLDN-WQLDLPAIADNL-DGVKVVYVCSPNNPTGNLINPQDLRTLLELTRG----KAIVVADEAYIEFCP----QA 193 (351)
T ss_pred EEeecCCC-CCCCHHHHHHhc-cCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCC----CcEEEEECchhhcCC----CC
Confidence 99999765 889999999988 588999999999999999998888888875421 578999999976431 00
Q ss_pred Ccccc--CCCCeeEEEEcCcc-cCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHc
Q 014163 259 LEWDF--RLPLVKSINVSGHK-YGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL 335 (429)
Q Consensus 259 ~~~~~--~~~~~d~~~~s~hK-~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l 335 (429)
...++ ..+++ .+.-+..| |+.++.++|+++.. ++.. +.+... ...+. ...+++.++...+
T Consensus 194 s~~~~~~~~~n~-iv~rSfSK~~glaGlRiGy~i~~-~~~i-~~l~~~-------~~~~~-------v~~~~~~~a~~~L 256 (351)
T PRK01688 194 SLAGWLAEYPHL-VILRTLSKAFALAGLRCGFTLAN-EEVI-NLLLKV-------IAPYP-------LSTPVADIAAQAL 256 (351)
T ss_pred ChHHHHhhCCCE-EEEecchHhhcCHHHHHhHHhCC-HHHH-HHHHhc-------cCCCC-------CCHHHHHHHHHHH
Confidence 00111 12233 34445666 55588889998763 2222 211111 00010 1112233333333
Q ss_pred C---HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceeccc-CC
Q 014163 336 G---FEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK-LP 411 (429)
Q Consensus 336 ~---~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~-~~ 411 (429)
. .+.+++.++...+.++++.+.|+++++++.+.++ ..+++.+++. +..++.+.|. ++|+.++.+ ..
T Consensus 257 ~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps-~~nfi~~~~~-----~~~~l~~~L~----~~gi~vr~~~~~ 326 (351)
T PRK01688 257 SPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFDS-ETNYILARFT-----ASSAVFKSLW----DQGIILRDQNKQ 326 (351)
T ss_pred hcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCC-CCcEEEEEcC-----CHHHHHHHHH----HCCeEEEECCCc
Confidence 2 2456777778888899999999998766544444 5677777653 3456777777 899999865 22
Q ss_pred CCCCCceEEEEEeccc
Q 014163 412 MSYPWSTKLRVISHLR 427 (429)
Q Consensus 412 ~~~~~~~~lRi~~~~~ 427 (429)
... ..++|||++++
T Consensus 327 ~~~--~~~iRis~~~~ 340 (351)
T PRK01688 327 PGL--SNCLRITIGTR 340 (351)
T ss_pred CCC--CCeEEEeCCCH
Confidence 222 35699999864
No 130
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.88 E-value=1.4e-20 Score=184.80 Aligned_cols=318 Identities=14% Similarity=0.047 Sum_probs=201.7
Q ss_pred CCCCCcccccccc-CC-ChHHHHHHHHHHcCcCC---CCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCch
Q 014163 53 DGNPRLNLASFVT-TW-MEPECDKLVMASINKNY---VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS 127 (429)
Q Consensus 53 ~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t 127 (429)
+++..+++.+..+ .+ ++|.+.+++.+.+.... ..+....+...+.+++++++++++|.+. .+++++|+
T Consensus 37 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~-------~i~~~~g~ 109 (385)
T PRK05958 37 DGRRMLNFASNDYLGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFGAER-------ALLFSSGY 109 (385)
T ss_pred CCceEEEeeCCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCc-------EEEECcHH
Confidence 4555555555432 23 45778888777665421 1112222445566778888999998532 66777788
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhC---Ce
Q 014163 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDEN---TI 204 (429)
Q Consensus 128 ~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~---~~ 204 (429)
+++..++.++.. .+++|++++++|+++..+++..|++++.++. .|++.+++++++. +.
T Consensus 110 ~~~~~~l~~~~~-------------~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~------~d~~~l~~~i~~~~~~~~ 170 (385)
T PRK05958 110 AANLAVLTALAG-------------KGDLIVSDKLNHASLIDGARLSRARVRRYPH------NDVDALEALLAKWRAGRA 170 (385)
T ss_pred HHHHHHHHHhCC-------------CCCEEEEeCccCHHHHHHHHhcCCceEEeCC------CCHHHHHHHHHhccCCCe
Confidence 888766655432 2368999999999999999999999888764 3788999998763 56
Q ss_pred EEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc--ccCCCCeeEEEEcCcccCCCC
Q 014163 205 CVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW--DFRLPLVKSINVSGHKYGLVY 282 (429)
Q Consensus 205 ~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~--~~~~~~~d~~~~s~hK~~~~p 282 (429)
++++..+.|++|.+.++++|+++|++| |+++|+|++|+.+........... .+....-+++..+.+|++. +
T Consensus 171 lvi~~~~~~~~G~~~~l~~i~~ia~~~------~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~-~ 243 (385)
T PRK05958 171 LIVTESVFSMDGDLAPLAELVALARRH------GAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALG-S 243 (385)
T ss_pred EEEEEecccCCCCcCCHHHHHHHHHHh------CCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcc-c
Confidence 666667889999999999999999999 999999999975432100000000 1111123466788899884 4
Q ss_pred CCeEEEEEeCCCCcccccccc-cCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhC
Q 014163 283 AGVGWVVWRTKDDLPDELVFH-INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKT 361 (429)
Q Consensus 283 ~g~g~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~ 361 (429)
.| |+++.+ ++ +.+.+... ..+. ..++.+.....+..++++.+... .+..++..++++++.+.|++.
T Consensus 244 ~G-g~~~~~-~~-~~~~~~~~~~~~~--------~~~~~~~~~~aa~~aal~~~~~~--~~~~~~~~~~~~~l~~~L~~~ 310 (385)
T PRK05958 244 SG-AAVLGS-ET-LIDYLINRARPFI--------FTTALPPAQAAAARAALRILRRE--PERRERLAALIARLRAGLRAL 310 (385)
T ss_pred CC-cEEEcC-HH-HHHHHHHhCccce--------ecCCCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc
Confidence 45 666543 22 21211111 1111 11222223444455666554332 567788899999999999987
Q ss_pred CCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceeccc-CCCCCCCceEEEEEec
Q 014163 362 GRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK-LPMSYPWSTKLRVISH 425 (429)
Q Consensus 362 ~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~-~~~~~~~~~~lRi~~~ 425 (429)
+ +++.. + ..+++.|.++. ..+..++.+.|. ++|+.+..+ .+....+..++|++++
T Consensus 311 ~-~~~~~-~-~~~~~~~~~~~--~~~~~~~~~~l~----~~gI~v~~~~~~~~~~~~~~lRis~~ 366 (385)
T PRK05958 311 G-FQLMD-S-QSAIQPLIVGD--NERALALAAALQ----EQGFWVGAIRPPTVPAGTSRLRITLT 366 (385)
T ss_pred C-CCcCC-C-CCCEEEEEeCC--HHHHHHHHHHHH----HCCceEecccCCCCCCCCceEEEEec
Confidence 6 66543 3 56777887642 234455666665 899999764 2221234568999996
No 131
>PLN02271 serine hydroxymethyltransferase
Probab=99.88 E-value=4.4e-20 Score=180.94 Aligned_cols=323 Identities=11% Similarity=0.025 Sum_probs=219.4
Q ss_pred CChHHHHHHHHHHcCcCCC-C------CccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYV-D------MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~ 139 (429)
+.+|.+.+++...+.+-+. . |.......++|..+.+...++||++... ....+-..+|+.||+.++.++..
T Consensus 159 ~~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~--~gaNVQp~SGs~AN~aV~~ALl~ 236 (586)
T PLN02271 159 FVCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEK--WGVNVQPYSCTSANFAVYTGLLL 236 (586)
T ss_pred cCCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccc--cccceeeccHHHHHHHHHHHhcC
Confidence 4567777777665544221 1 2233456799999999999999987521 00235556999999999888854
Q ss_pred HHHHHHHhcCCCCCCcEEEEcCC---CchHHH------HHHHhcCceeEEEe--ccCCccccCHHHHHH-HhhhCCeEEE
Q 014163 140 KWQQKRKEQGKPYDKPNIVTGAN---VQVCWE------KFARYFEVELKEVK--LEEGYYVMNPVKAVE-LVDENTICVA 207 (429)
Q Consensus 140 ~~~~~~~~~g~~~~~~~vi~~~~---~h~s~~------~~~~~~G~~v~~v~--~~~~~~~~d~~~l~~-~i~~~~~~v~ 207 (429)
.++.|+..+. +|.+.. +.+...|..+..+| ++++++.+|.++|++ ++..+|++|+
T Consensus 237 -------------PGD~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~~g~IDyd~lek~a~~~rPKLII 303 (586)
T PLN02271 237 -------------PGDRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQTGYIDYDKLEEKALDFRPKILI 303 (586)
T ss_pred -------------CCCEEEEecCCCCCchhcccccccccccccccceEEEEEcccccccCccCHHHHHHHhhhcCCeEEE
Confidence 2367776444 555533 23456677777777 555558999999998 6677899888
Q ss_pred EeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEE
Q 014163 208 AILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGW 287 (429)
Q Consensus 208 ~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~ 287 (429)
+.+..++ ...|+++|+++|+++ |+++++|+||..+..+. ...+ -.+.++|++++++|||+.+|.| |+
T Consensus 304 ~g~Sayp--r~~D~~~i~eIAdev------GA~LmvD~AH~aGLIa~--g~~~--sP~~~aDvvt~TTHKtLrGPrG-G~ 370 (586)
T PLN02271 304 CGGSSYP--REWDYARFRQIADKC------GAVLMCDMAHISGLVAA--KECV--NPFDYCDIVTSTTHKSLRGPRG-GI 370 (586)
T ss_pred ECchhcc--CcCCHHHHHHHHHHc------CCEEEEECccccccccc--CcCC--CCCcCCcEEEeCCcccCCCCCc-eE
Confidence 7666666 667899999999999 99999999997665421 1111 1234799999999999999999 77
Q ss_pred EEEeCCCCcccccccccCCCCC-----------CCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH
Q 014163 288 VVWRTKDDLPDELVFHINYLGS-----------DQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALRE 356 (429)
Q Consensus 288 l~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~ 356 (429)
+++++... ...-.....|... ....+.++|.+....++++..+++......++++.++..++++.|.+
T Consensus 371 I~~r~~~~-~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~ 449 (586)
T PLN02271 371 IFYRKGPK-LRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALAS 449 (586)
T ss_pred EEeccccc-ccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 77764311 0000000001000 00012344555445688888888877666679999999999999999
Q ss_pred HHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceeccc-CCCC--CCCceEEEEEe
Q 014163 357 GLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK-LPMS--YPWSTKLRVIS 424 (429)
Q Consensus 357 ~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~-~~~~--~~~~~~lRi~~ 424 (429)
.|.+.+ ++++....+.+++.+.+.+. +++...+.+.|. +.||.++.. .|.+ ......|||..
T Consensus 450 ~L~~~G-~~vv~ggTdnHlvLvDl~~~-g~~G~~ae~~Le----~~~I~~Nkn~iP~d~~~~~psGiRiGT 514 (586)
T PLN02271 450 ALLRRK-CRLVTGGTDNHLLLWDLTTL-GLTGKNYEKVCE----MCHITLNKTAIFGDNGTISPGGVRIGT 514 (586)
T ss_pred HHHHCC-CeEeeCCCCcceeeecCccc-CCCHHHHHHHHH----HcCeEeccccCCCCCCCCCCCcccccC
Confidence 999987 99987555778888887653 466777777777 899998765 3332 11234578743
No 132
>PRK08175 aminotransferase; Validated
Probab=99.88 E-value=4.8e-20 Score=181.46 Aligned_cols=329 Identities=13% Similarity=0.042 Sum_probs=211.2
Q ss_pred CCCCCccccccccCCCh-HHHHHHHHHHcCc-CCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHH
Q 014163 53 DGNPRLNLASFVTTWME-PECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAI 130 (429)
Q Consensus 53 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~ 130 (429)
.+.+.++|..+.|.... +.+.+.+.+.+.. ....|....+..++++.+.+++.+.+|.+.+.. ...++|+|+++++
T Consensus 27 ~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~--~~i~~t~G~~~~l 104 (395)
T PRK08175 27 RGEDIIDFSMGNPDGPTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPE--SEAIVTIGSKEGL 104 (395)
T ss_pred cCCCeEEcCCCCCCCCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCC--CcEEEccCcHHHH
Confidence 34455666776666443 3355555544432 234465566889999999999988878754321 1388999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhh---CCeEEE
Q 014163 131 MLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE---NTICVA 207 (429)
Q Consensus 131 ~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~---~~~~v~ 207 (429)
...+.++.+ .++.|++++++|..+...++..|+++..+|++++ ..+.++++++++. ++++|+
T Consensus 105 ~~~~~~~~~-------------~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~--~~~~~~l~~~l~~~~~~~~~v~ 169 (395)
T PRK08175 105 AHLMLATLD-------------HGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEG--VDFFNELERAIRESYPKPKMMI 169 (395)
T ss_pred HHHHHHhCC-------------CCCEEEEcCCCCcchHHHHHHcCCeEEEEecccC--CCcHHHHHHHHhhccCCceEEE
Confidence 887776643 2368999999999888888899999999998754 2458888888863 688999
Q ss_pred EeeCCCccccccCh---HHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcccc-CC---CCeeEEEEcCcccC-
Q 014163 208 AILGSTLTGEFEDV---KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RL---PLVKSINVSGHKYG- 279 (429)
Q Consensus 208 ~~~~~~~tG~~~~l---~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~---~~~d~~~~s~hK~~- 279 (429)
+++|+||||.+-+. ++|+++|+++ ++++++|++|+.+.. .+.....+ .. .+...+..+.-|.+
T Consensus 170 i~~p~NPtG~~~~~~~~~~i~~~a~~~------~i~ii~De~y~~l~~---~~~~~~~~~~~~~~~~~~i~~~S~SK~~g 240 (395)
T PRK08175 170 LGFPSNPTAQCVELEFFEKVVALAKRY------DVLVVHDLAYADIVY---DGWKAPSIMQVPGAKDVAVEFFTLSKSYN 240 (395)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHHHHHc------CcEEEEecchHhhcc---CCCCCcchhcCCCcccCEEEEeecccccc
Confidence 99999999998666 7999999999 999999999986431 11111111 11 12334456777766
Q ss_pred CCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHc--CHHHHHHHHHHHHHHHHHHHHH
Q 014163 280 LVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEGYKNIMENCMGNARALREG 357 (429)
Q Consensus 280 ~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l--~~~g~~~~~~~~~~~~~~l~~~ 357 (429)
.++.++||++. +++.. +.+.....+... ++.. . .+.+++..+ ....+++..++..++++++.+.
T Consensus 241 ~pGlRiG~~~~-~~~l~-~~~~~~~~~~~~--------~~~~-~---~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 306 (395)
T PRK08175 241 MAGWRIGFMVG-NPELV-SALARIKSYHDY--------GTFT-P---LQVAAIAALEGDQQCVRDIAEQYKRRRDVLVKG 306 (395)
T ss_pred CcchhheeeeC-CHHHH-HHHHHHHhhccc--------CCCc-H---HHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHH
Confidence 67788999875 33222 222211111111 1111 1 222222222 2334566677788889999999
Q ss_pred HHhCCCeEEeeCCCCceEEEEEecCCC-CCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEecc
Q 014163 358 LEKTGRFEILSKDVGVPLVAFSLKDSS-AHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHL 426 (429)
Q Consensus 358 L~~~~~~~~~~~~~~~~~v~f~~~~~~-~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~ 426 (429)
|++.+ +.+..+ .....+.+++++.. ..+..++.++|.+ +.|+.+.+.......+..++|++++.
T Consensus 307 L~~~~-~~~~~p-~~g~~i~i~l~~~~~~~~~~~~~~~l~~---~~gv~v~p~~~f~~~~~~~lRis~~~ 371 (395)
T PRK08175 307 LHEAG-WMVEMP-KASMYVWAKIPEPYAAMGSLEFAKKLLN---EAKVCVSPGIGFGDYGDTHVRFALIE 371 (395)
T ss_pred HHHcC-CcccCC-CEEEEEEEECCcccCCCCHHHHHHHHHH---hCCEEEeCchhhCcCCCCeEEEEeCC
Confidence 99885 765433 24566667765321 1245677765541 68998876511112334579999864
No 133
>PLN02672 methionine S-methyltransferase
Probab=99.88 E-value=1.5e-20 Score=198.49 Aligned_cols=328 Identities=11% Similarity=0.056 Sum_probs=218.2
Q ss_pred CCCCCccccccccCCC-hHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHH
Q 014163 53 DGNPRLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIM 131 (429)
Q Consensus 53 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~ 131 (429)
.+++.+++..+.+..+ ++.+.+++.+++..... +.+..++.+.+++|+++.+|++.+..+ .+++|+|+++++.
T Consensus 695 ~g~~vI~LsinE~d~ppPp~V~eAi~eal~~~~~----s~g~pdlr~aLa~~la~~~Gv~~d~~e--~IIvt~Gs~elL~ 768 (1082)
T PLN02672 695 QESSLIHMDVDESFLPVPSAVKASIFESFVRQNI----SESETDPRPSILQFIKSNYGFPTDSCT--EFVYGDTSLALFN 768 (1082)
T ss_pred CCCCEEEEeCCCCCCCCCHHHHHHHHHHHhhcCC----CCCChHHHHHHHHHHHHHhCcCCCCCC--EEEEeCCHHHHHH
Confidence 3566677888777765 45588888776643211 223445678999999999999764321 3778888888888
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccC-CccccCHHHHHHHhhh-CCeEEEEe
Q 014163 132 LAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDE-NTICVAAI 209 (429)
Q Consensus 132 ~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~-~~~~v~~~ 209 (429)
.++.++.+ .++.|+++.++|+.+..+++..|++++.+|+++ +++.+|+++|++++++ ++++|+++
T Consensus 769 lll~aLl~-------------pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~ 835 (1082)
T PLN02672 769 KLVLCCVQ-------------EGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYIS 835 (1082)
T ss_pred HHHHHHcC-------------CCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEE
Confidence 88887765 236899999999999999999999999999973 4589999999999976 34688999
Q ss_pred eCC-Cccccc---cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCC-cccc-----CC------CCeeEEEE
Q 014163 210 LGS-TLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-EWDF-----RL------PLVKSINV 273 (429)
Q Consensus 210 ~~~-~~tG~~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~-----~~------~~~d~~~~ 273 (429)
+|+ ||||.+ +.+++|+++|++| +++|++|++|+.... ..... ..++ .. ..+-.+..
T Consensus 836 nPnhNPTG~v~S~eeLe~Llela~k~------di~VIsDEaYsdL~F--d~~~~s~~sl~s~l~~~~~~sks~nVIvL~S 907 (1082)
T PLN02672 836 GPTINPTGLLYSNSEIEEILSVCAKY------GARVIIDTSFSGLEY--DTSGWGGWDLKSILSRLKSSNPSFAVALLGG 907 (1082)
T ss_pred CcCCCCcCccCCHHHHHHHHHHHHHc------CCEEEEeCCCCcccc--CCCCCcccchhhHHHHhccccCCceEEEEeC
Confidence 998 999998 5678888899999 999999999986321 11110 0001 00 12445555
Q ss_pred cCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC------HHHHHHHHHHH
Q 014163 274 SGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG------FEGYKNIMENC 347 (429)
Q Consensus 274 s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~------~~g~~~~~~~~ 347 (429)
.++|++++++++||++..++... +.+.....+. ........++.+++..+. .+.+++..+..
T Consensus 908 fSKkf~lpGLRIGylIap~~eLi-~~l~~~~~~s-----------~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~L 975 (1082)
T PLN02672 908 LSTELLSGGHEFGFLALNDSVLI-DAFHSAPGLS-----------RPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKIL 975 (1082)
T ss_pred cHHhhccHHHHheeEEeCCHHHH-HHHHHhhhhc-----------CCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHH
Confidence 67899999999999987543222 2221111100 000112233333333221 12355666778
Q ss_pred HHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecC-----------CC-----CCCHHHHHHHHHHHHhccCceecccCC
Q 014163 348 MGNARALREGLEKTGRFEILSKDVGVPLVAFSLKD-----------SS-----AHTVFEISEGLRKKLNRFQVVYPQKLP 411 (429)
Q Consensus 348 ~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~-----------~~-----~~~~~~~~~~L~~~l~~~G~~~~~~~~ 411 (429)
.++++++.+.|++.+ +.+.. + ..++++|.-.+ .. ..+..++.+.|.+ +.|+.+.+...
T Consensus 976 k~rRd~L~e~L~~~G-i~v~~-P-eGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLe---e~GVaV~PGs~ 1049 (1082)
T PLN02672 976 KSRAERLKETLEACG-WDVLE-P-QGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILK---STGLCINSSSW 1049 (1082)
T ss_pred HHHHHHHHHHHHHCC-CeEec-C-CcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHH---cCCEEEecCcc
Confidence 889999999999985 77653 3 56666664211 00 2356777777762 34998876411
Q ss_pred CCCCCceEEEEEeccc
Q 014163 412 MSYPWSTKLRVISHLR 427 (429)
Q Consensus 412 ~~~~~~~~lRi~~~~~ 427 (429)
....+++|++++.+
T Consensus 1050 --FG~~g~~RIsfa~~ 1063 (1082)
T PLN02672 1050 --TGIPGYCRFSFALE 1063 (1082)
T ss_pred --cCCCCeEEEEecCC
Confidence 12246799999864
No 134
>PLN02231 alanine transaminase
Probab=99.88 E-value=5.7e-20 Score=185.58 Aligned_cols=327 Identities=13% Similarity=0.074 Sum_probs=208.9
Q ss_pred ccccccccCCChHHHHHHHHHHcCc----CCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHH
Q 014163 58 LNLASFVTTWMEPECDKLVMASINK----NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLA 133 (429)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~a 133 (429)
+++....+.++...+..+. ..+.. ..+.|..+.+..++++.+.+++.+..|.+.+. ..+++|+|+++|+.++
T Consensus 132 i~~~~~~~~fp~~~i~~a~-~~l~~~~~~~~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~p---e~I~iT~Ga~~ai~~~ 207 (534)
T PLN02231 132 LDKSETHGLFSADAIERAW-QILDQIPGRATGAYSHSQGIKGLRDAIAAGIEARDGFPADP---NDIFLTDGASPAVHMM 207 (534)
T ss_pred CCCCCccccCCHHHHHHHH-HHHHhcCCccccCcCCCCCcHHHHHHHHHHHHhccCCCCCc---ccEEEeCCHHHHHHHH
Confidence 4444444445544444433 34432 23457778899999999999999887876543 2489999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccC-CccccCHHHHHHHhhh------CCeEE
Q 014163 134 GLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDE------NTICV 206 (429)
Q Consensus 134 l~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~------~~~~v 206 (429)
+.+++.. .++.|+++.++|+.+...++..|++++.+++++ ++|.+|+++|++++++ +++++
T Consensus 208 ~~~l~~~------------~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~i 275 (534)
T PLN02231 208 MQLLIRS------------EKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRAL 275 (534)
T ss_pred HHHhccC------------CCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEE
Confidence 9887531 136899999999999999999999999999974 3479999999999976 67899
Q ss_pred EEeeCCCccccc---cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcccc-------CC--CCeeEEEE-
Q 014163 207 AAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-------RL--PLVKSINV- 273 (429)
Q Consensus 207 ~~~~~~~~tG~~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-------~~--~~~d~~~~- 273 (429)
++++|+||||.+ +.+++|.++|++| ++++++|++|..+.. ........+ +. .....+++
T Consensus 276 vl~nP~NPTG~vls~e~l~~Iv~~a~~~------~l~lI~DEvY~~l~y--~~~~~~~s~~~~~~~~g~~~~~~~vi~l~ 347 (534)
T PLN02231 276 VVINPGNPTGQVLAEENQRDIVEFCKQE------GLVLLADEVYQENVY--VPDKKFHSFKKVARSMGYGEKDISLVSFQ 347 (534)
T ss_pred EEeCCCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEEccchhccc--CCCCCcccHHHHHhhhccccCCceEEEEe
Confidence 999999999998 4678899999999 999999999987431 111110111 00 11223333
Q ss_pred cCcc-c-CCCCCCeEEEEEeC-CCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC-----HHHH-----
Q 014163 274 SGHK-Y-GLVYAGVGWVVWRT-KDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-----FEGY----- 340 (429)
Q Consensus 274 s~hK-~-~~~p~g~g~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~-----~~g~----- 340 (429)
|.-| + +.+++++||+++.+ +..+.+.+..... . .. ++. ...+.++...+. ...+
T Consensus 348 S~SK~~~g~pGlRiGy~~~~~~~~~l~~~l~k~~~-~-------~~-~s~----~~~Q~~~~~~l~~p~~~~~~y~~~~~ 414 (534)
T PLN02231 348 SVSKGYYGECGKRGGYMEVTGFTSDVREQIYKVAS-V-------NL-CSN----ISGQILASLVMSPPKPGDESYESYMA 414 (534)
T ss_pred ccCcccccCCccceEEEEEecCCHHHHHHHHHHHh-h-------hc-CCC----hHHHHHHHHHhCCCCCCcchHHHHHH
Confidence 5667 3 45899999997632 1122222211111 0 00 121 122333332221 1222
Q ss_pred --HHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEE-Eec-CCCCC---------CHHHHHHHHHHHHhccCceec
Q 014163 341 --KNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAF-SLK-DSSAH---------TVFEISEGLRKKLNRFQVVYP 407 (429)
Q Consensus 341 --~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f-~~~-~~~~~---------~~~~~~~~L~~~l~~~G~~~~ 407 (429)
.++.+...++++++.+.|++++++.+.. + ..++++| ++. +.... ....++..|. .+.|+.+.
T Consensus 415 ~~~~i~~~~~~r~~~l~~~L~~~~gi~~~~-p-~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll---~~~GV~vv 489 (534)
T PLN02231 415 EKDGILSSLARRAKTLEDALNSLEGVTCNK-A-EGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLL---NATGIVVV 489 (534)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCceecC-C-CeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHH---HhcCEEEe
Confidence 2345677889999999999987787653 3 5777777 332 11001 1112334343 26799988
Q ss_pred ccC-CCCCCCceEEEEEecc
Q 014163 408 QKL-PMSYPWSTKLRVISHL 426 (429)
Q Consensus 408 ~~~-~~~~~~~~~lRi~~~~ 426 (429)
+.. .....+...+|+|+..
T Consensus 490 PGs~Fg~~~g~~~~Rit~~~ 509 (534)
T PLN02231 490 PGSGFGQVPGTWHFRCTILP 509 (534)
T ss_pred CCcccCCCCCCCeEEEEeCC
Confidence 762 2222455679999864
No 135
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.88 E-value=5.4e-22 Score=187.20 Aligned_cols=226 Identities=15% Similarity=0.053 Sum_probs=162.7
Q ss_pred HHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCce
Q 014163 98 NRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVE 177 (429)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~ 177 (429)
+++.+.+++++|.+. ...+|+|+|+++..++.++.. .+++|++++++|.++..++...|++
T Consensus 62 ~~~~~~~A~~~ga~~------~~~~~~Gst~a~~~~l~al~~-------------~gd~Vlv~~~~h~s~~~~~~~~g~~ 122 (294)
T cd00615 62 KEAQELAARAFGAKH------TFFLVNGTSSSNKAVILAVCG-------------PGDKILIDRNCHKSVINGLVLSGAV 122 (294)
T ss_pred HHHHHHHHHHhCCCC------EEEEcCcHHHHHHHHHHHcCC-------------CCCEEEEeCCchHHHHHHHHHCCCE
Confidence 355566899999864 244588999999988887654 2368999999999999999999999
Q ss_pred eEEEeccCCc-----cccCHHHHHHHhhh--CCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccc
Q 014163 178 LKEVKLEEGY-----YVMNPVKAVELVDE--NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGF 250 (429)
Q Consensus 178 v~~v~~~~~~-----~~~d~~~l~~~i~~--~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~ 250 (429)
+++++++.+. +.+|++++++++++ ++++|+++++ |++|.+.|+++|+++|+++ |++++||+||+.+
T Consensus 123 ~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~------g~~livDeA~~~~ 195 (294)
T cd00615 123 PVYLKPERNPYYGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYNLRKIVEEAHHR------GLPVLVDEAHGAH 195 (294)
T ss_pred EEEecCccCcccCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecCHHHHHHHHHhc------CCeEEEECcchhh
Confidence 9999875321 37999999999974 5788899987 6899999999999999999 9999999999864
Q ss_pred cccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHH
Q 014163 251 IAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYY 330 (429)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~ 330 (429)
.. +.+..+.+....++|+++.|+||++.++.+.|++..++.......+........ .+|++...+.++..
T Consensus 196 ~~--~~~~~~~~~~~~~~div~~S~hK~l~g~~~~~~l~~~~~~~~~~~~~~~~~~~~--------ttsps~~~~asl~~ 265 (294)
T cd00615 196 FR--FHPILPSSAAMAGADIVVQSTHKTLPALTQGSMIHVKGDLVNPDRVNEALNLHQ--------STSPSYLILASLDV 265 (294)
T ss_pred hc--cCcccCcchhhcCCcEEEEchhcccchHhHHHHHHhCCCcCCHHHHHHHHHHHC--------CCCcHHHHHHHHHH
Confidence 32 222222222234799999999999877777777776553111111111111111 13454455566666
Q ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHHHHh
Q 014163 331 QFIRLGFEGYKNIMENCMGNARALREGLEK 360 (429)
Q Consensus 331 al~~l~~~g~~~~~~~~~~~~~~l~~~L~~ 360 (429)
+++.+..+| ++.+++..+++++++++|.+
T Consensus 266 a~~~~~~~g-~~~~~~~~~~~~~~r~~l~~ 294 (294)
T cd00615 266 ARAMMALEG-KELVEELIELALYARQEINK 294 (294)
T ss_pred HHHHHHHHh-HHHHHHHHHHHHHHHHHHhC
Confidence 666665555 45678888899999988753
No 136
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.88 E-value=6e-20 Score=181.09 Aligned_cols=327 Identities=14% Similarity=0.033 Sum_probs=208.6
Q ss_pred CCCccccccccCC-ChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHH
Q 014163 55 NPRLNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLA 133 (429)
Q Consensus 55 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~a 133 (429)
...++|..+.++. +++.+.+++..... ....|....+..++++.+.+++.. .|...+. ..+++|+|+++|+.++
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~-~~~~~~~---~~i~~t~G~~~al~~~ 104 (397)
T PRK07568 30 IKVYHLNIGQPDIKTPEVFFEAIKNYDE-EVLAYSHSQGIPELREAFAKYYKK-WGIDVEP---DEILITNGGSEAILFA 104 (397)
T ss_pred CCEEEecCCCCCCCCCHHHHHHHHHHhc-CCcCcCCCCCCHHHHHHHHHHHHH-hCCCCCc---ceEEEcCChHHHHHHH
Confidence 3345566666654 34557777765543 333455556788888887777763 4543321 2388999999999988
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccC-Cccc-cCHHHHHHHhhhCCeEEEEeeC
Q 014163 134 GLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYV-MNPVKAVELVDENTICVAAILG 211 (429)
Q Consensus 134 l~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~-~d~~~l~~~i~~~~~~v~~~~~ 211 (429)
+.++.. .+++|+++++.|..+...++..|++++.++++. +++. .|+++|++++++++++|++++|
T Consensus 105 ~~~l~~-------------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~~~~~~~~~v~i~~p 171 (397)
T PRK07568 105 MMAICD-------------PGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEKLITPKTKAILISNP 171 (397)
T ss_pred HHHhcC-------------CCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHHhcCccceEEEEECC
Confidence 877643 135899999988888888889999999999863 3234 3689999999989999999999
Q ss_pred CCcccccc---ChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCc--ccc-CCCCeeEEEEcCcccCC-CCCC
Q 014163 212 STLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE--WDF-RLPLVKSINVSGHKYGL-VYAG 284 (429)
Q Consensus 212 ~~~tG~~~---~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~-~~~~~d~~~~s~hK~~~-~p~g 284 (429)
+||||.+. ++++|+++|+++ ++++++|++|+.+.. ...... ..+ +...-..+..|..|.++ ++.+
T Consensus 172 ~NPtG~~~~~~~~~~i~~~~~~~------~~~ii~De~y~~~~~--~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~R 243 (397)
T PRK07568 172 GNPTGVVYTKEELEMLAEIAKKH------DLFLISDEVYREFVY--DGLKYTSALSLEGLEDRVIIIDSVSKRYSACGAR 243 (397)
T ss_pred CCCCCccCCHHHHHHHHHHHHHC------CcEEEEeccchhccc--CCCCccChhhcCCCcCCEEEEecchhhccCCCcc
Confidence 99999985 478999999999 999999999987431 111111 111 11111244456678654 6889
Q ss_pred eEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHc--CHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 014163 285 VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--GFEGYKNIMENCMGNARALREGLEKTG 362 (429)
Q Consensus 285 ~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l--~~~g~~~~~~~~~~~~~~l~~~L~~~~ 362 (429)
+|+++..+++.. ..+...... .+ + ...+.+.++...+ +.+.+++..+...++++.+.+.|++++
T Consensus 244 ~G~~~~~~~~~~-~~~~~~~~~------~~---~----~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 309 (397)
T PRK07568 244 IGCLISKNKELI-AAAMKLCQA------RL---S----PPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNKIP 309 (397)
T ss_pred eEEEecCCHHHH-HHHHHHhhc------cC---C----CCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999887543332 211111000 00 1 1122233333333 345567777888889999999999887
Q ss_pred CeEEeeCCCCceEE-EEEecCCCCCCHHHHHHHHHHHH--hccCceeccc--CCC-CCCCceEEEEEecc
Q 014163 363 RFEILSKDVGVPLV-AFSLKDSSAHTVFEISEGLRKKL--NRFQVVYPQK--LPM-SYPWSTKLRVISHL 426 (429)
Q Consensus 363 ~~~~~~~~~~~~~v-~f~~~~~~~~~~~~~~~~L~~~l--~~~G~~~~~~--~~~-~~~~~~~lRi~~~~ 426 (429)
++.+..+ ..+++ .++++. .+..++.+.|.++. .++|+.+.+. +.. ...+..++|++++.
T Consensus 310 ~~~~~~p--~g~~~~~~~l~~---~~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~ 374 (397)
T PRK07568 310 GVVCEKP--KGAFYIIAKLPV---DDAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVL 374 (397)
T ss_pred CceecCC--CcceEEEEecCC---CCHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeC
Confidence 6665433 34444 445532 25667877776322 1258888764 211 11234689999863
No 137
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=1.6e-20 Score=183.38 Aligned_cols=310 Identities=12% Similarity=0.068 Sum_probs=202.0
Q ss_pred ccccccCC-ChHHHHHHHHHHcCcCC--CCCccChhhHHHHHHHHHHHHHhhC--CCCCCCCCCCceEeCCchHHHHHHH
Q 014163 60 LASFVTTW-MEPECDKLVMASINKNY--VDMDEYPVTTELQNRCVNMIAHLFN--TPVADDKTAVGVGTVGSSEAIMLAG 134 (429)
Q Consensus 60 ~~~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~le~~~~~~la~l~g--~~~~~~~~~~~~~t~g~t~a~~~al 134 (429)
+..+.++. +++.+.+++.++++.+. ..| ..++..++++.+.+|+.+.+| .+.+. ..+++|+|+++++..++
T Consensus 33 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y-~~~G~~~Lr~aia~~~~~~~~~~~~v~~---~~I~it~Ga~~al~~~~ 108 (374)
T PRK02610 33 LDTNEFPYDLPPDLKQKLAWLYQQGIESNRY-PDGGHEALKQAIAEYVNESAAGSSQITP---ANISVGNGSDELIRSLL 108 (374)
T ss_pred ecCCCCCCCCCHHHHHHHHHHHhhcccccCC-CCCchHHHHHHHHHHhCccccccCCCCH---HHEEEcCChHHHHHHHH
Confidence 44444443 45668888877666532 234 335778888887777776542 22221 23889999999998777
Q ss_pred HHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhh----CCeEEEEee
Q 014163 135 LAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE----NTICVAAIL 210 (429)
Q Consensus 135 ~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~----~~~~v~~~~ 210 (429)
.+.... +++.|+++.++|..+..+++..|++++.++++++++.+|+++|+++++. ++++|+++.
T Consensus 109 ~~~~~~------------g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~ 176 (374)
T PRK02610 109 IATCLG------------GEGSILVAEPTFSMYGILAQTLGIPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVH 176 (374)
T ss_pred HHHcCC------------CCCeEEEcCCChHHHHHHHHHcCCEEEEecCCcccCCCCHHHHHHHHHhhcCCCceEEEEeC
Confidence 765431 1137999999999999999999999999998765588999999999874 789999999
Q ss_pred CCCccccccChHHHHHHHHH-hhhccCCCccEEeecccccccccccCCCCcccc-CCCCeeEEEEcCcccC-CCCCCeEE
Q 014163 211 GSTLTGEFEDVKLLHDLLTK-KNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYG-LVYAGVGW 287 (429)
Q Consensus 211 ~~~~tG~~~~l~~I~~la~~-~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~d~~~~s~hK~~-~~p~g~g~ 287 (429)
|+||||.+.+.+++.++++- + ++++++|++|..+.. . .... .+ ...++-+ ..|.-|.+ +++.++||
T Consensus 177 P~NPTG~~~s~~~l~~l~~~~~------~~~iI~De~Y~~~~~--~-~~~~-~~~~~~~~iv-i~SfSK~~g~~GlRiG~ 245 (374)
T PRK02610 177 PNSPTGNPLTAAELEWLRSLPE------DILVVIDEAYFEFSQ--T-TLVG-ELAQHPNWVI-LRTFSKAFRLAAHRVGY 245 (374)
T ss_pred CCCCCCCCCCHHHHHHHHhccC------CcEEEEeccccccCc--c-chHH-HHhcCCCEEE-EEecchhccCcccceee
Confidence 99999999887777776542 4 899999999986421 1 0001 11 1123333 44566755 89999999
Q ss_pred EEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHhCCCeEE
Q 014163 288 VVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-FEGYKNIMENCMGNARALREGLEKTGRFEI 366 (429)
Q Consensus 288 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~-~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~ 366 (429)
++.. ++.. +.+.... . .+ + ...+.+.++...++ .+.+.+.+++..+.++.+.+.|++++++.+
T Consensus 246 ~v~~-~~l~-~~l~~~~-~------~~----~---~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~ 309 (374)
T PRK02610 246 AIGH-PELI-AVLEKVR-L------PY----N---LPSFSQLAAQLALEHRQELLAAIPEILQERDRLYQALQELPQLRV 309 (374)
T ss_pred eecC-HHHH-HHHHHhc-C------CC----C---CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEe
Confidence 8853 2222 2221111 0 01 1 12223444444443 234445555556667888899988876765
Q ss_pred eeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 367 LSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 367 ~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
. + ...+.+.++++. +.+..++.+.|. ++|+.+... ..++|++++.+
T Consensus 310 ~-p-~~g~f~~~~l~~--~~~~~~~~~~l~----~~gi~v~~~-------~~~lRls~~~~ 355 (374)
T PRK02610 310 W-P-SAANFLYLRLSQ--DAALAALHQALK----AQGTLVRHT-------GGGLRITIGTP 355 (374)
T ss_pred C-C-CcceEEEEeCCC--CCCHHHHHHHHH----HCCEEEEeC-------CCeEEEeCCCH
Confidence 3 3 245555555532 356677877777 899987631 24699998753
No 138
>PLN02368 alanine transaminase
Probab=99.88 E-value=1.4e-20 Score=184.48 Aligned_cols=272 Identities=13% Similarity=0.063 Sum_probs=183.4
Q ss_pred ChHHHHHHHHHHc--CcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHH
Q 014163 68 MEPECDKLVMASI--NKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (429)
Q Consensus 68 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~ 145 (429)
+++.+.+++.... +.....|....+..+|++++.+++.+.+|++.+. ..+++|+|+++++.+++.++...
T Consensus 82 p~~~i~~a~~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~---~~I~it~Ga~~al~~~~~~l~~~----- 153 (407)
T PLN02368 82 PADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDP---ELIFLTDGASKGVMQILNAVIRG----- 153 (407)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCh---hhEEEcccHHHHHHHHHHHHcCC-----
Confidence 3344555544322 1223456666688899999999999888865432 23889999999999888877521
Q ss_pred HhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccC-CccccCHHHHHHHhhh------CCeEEEEeeCCCccccc
Q 014163 146 KEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDE------NTICVAAILGSTLTGEF 218 (429)
Q Consensus 146 ~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~------~~~~v~~~~~~~~tG~~ 218 (429)
.+++|+++.++|+.+...++..|++++.+++++ ++|.+|+++|++++++ +++++++++|+||||.+
T Consensus 154 -------pGd~Vli~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v 226 (407)
T PLN02368 154 -------EKDGVLVPVPQYPLYSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQC 226 (407)
T ss_pred -------CCCEEEEeCCCCccHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCcc
Confidence 236899999999999999999999999999874 3478999999999975 68999999999999998
Q ss_pred ---cChHHHHHHHHHhhhccCCCccEEeecccccccccccCC-CC-c-c----ccC-----CCCeeEEEEcCccc--CCC
Q 014163 219 ---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYP-DL-E-W----DFR-----LPLVKSINVSGHKY--GLV 281 (429)
Q Consensus 219 ---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~-~~-~-~----~~~-----~~~~d~~~~s~hK~--~~~ 281 (429)
+.+++|+++|++| ++++++|++|+.+.. ... .. . . ++. ...+-++. +..|. +++
T Consensus 227 ~s~e~l~~l~~~a~~~------~~~II~DE~Y~~l~y--~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~-SfSK~~~~~~ 297 (407)
T PLN02368 227 LSEANLREILKFCYQE------RLVLLGDEVYQQNIY--QDERPFISAKKVLMDMGPPISKEVQLVSFH-TVSKGYWGEC 297 (407)
T ss_pred CCHHHHHHHHHHHHHc------CCEEEEEcccccccc--CCCCCcccHHHHHhhhcccccccceEEEEe-cCCcccccCC
Confidence 4567788889999 999999999987431 110 00 0 0 010 01233333 45564 469
Q ss_pred CCCeEEEEEe--CCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCH------------HHHHHHHHHH
Q 014163 282 YAGVGWVVWR--TKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF------------EGYKNIMENC 347 (429)
Q Consensus 282 p~g~g~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~------------~g~~~~~~~~ 347 (429)
++++||+++. +++.+ +.+.... ... .+ ...++++++...+.. +..+++.+..
T Consensus 298 GlRiGy~i~~~~~~~li-~~~~~~~-~~~---------~~---~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 363 (407)
T PLN02368 298 GQRGGYFEMTNIPPKTV-EEIYKVA-SIA---------LS---PNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESL 363 (407)
T ss_pred ccceEEEEEeCCCHHHH-HHHHHHh-ccc---------CC---CCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHH
Confidence 9999999852 22222 2211110 000 11 123345555555531 1123456788
Q ss_pred HHHHHHHHHHHHhCCCeEEeeCCCCceEEEEE
Q 014163 348 MGNARALREGLEKTGRFEILSKDVGVPLVAFS 379 (429)
Q Consensus 348 ~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~ 379 (429)
+++++.+.+.|++++++.+.. | +.++++|-
T Consensus 364 ~~rr~~~~~~L~~~~g~~~~~-P-~Gafy~~~ 393 (407)
T PLN02368 364 RRRARMMTDGFNSCKNVVCNF-T-EGAMYSFP 393 (407)
T ss_pred HHHHHHHHHHHhCCCCeEeCC-C-CeeeEecc
Confidence 889999999999998787654 3 56777663
No 139
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.88 E-value=7.2e-20 Score=182.09 Aligned_cols=306 Identities=13% Similarity=0.058 Sum_probs=203.3
Q ss_pred CChHHHHHHHHHHc-CcCCCC------CccChhhHHHHHHHHHHHHHhhCCCCCCCCCC-CceEeCCchHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASI-NKNYVD------MDEYPVTTELQNRCVNMIAHLFNTPVADDKTA-VGVGTVGSSEAIMLAGLAFK 138 (429)
Q Consensus 67 ~~~~~~~~~~~~~~-~~~~~~------~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~-~~~~t~g~t~a~~~al~a~~ 138 (429)
..+|.+.+++.+.+ +..... +.......++|+.+.+...++|+..... . ..+-.++|+.||..++.++.
T Consensus 45 ~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~~~~~~~f~~~~~~---~~~nv~~~SG~~AN~av~~aL~ 121 (475)
T PLN03226 45 FTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQKRALEAFRLDPEK---WGVNVQPLSGSPANFAVYTALL 121 (475)
T ss_pred cCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHHHHHHHHhCCCcce---eEEecCcCchHHHHHHHHHHhC
Confidence 45677888887777 433222 2223466888888888899999987531 1 12234788999998888876
Q ss_pred HHHHHHHHhcCCCCCCcEEEE---cCCCchH---HHHHHHhcCce--eEEE--eccCCccccCHHHHHHHhhh-CCeEEE
Q 014163 139 RKWQQKRKEQGKPYDKPNIVT---GANVQVC---WEKFARYFEVE--LKEV--KLEEGYYVMNPVKAVELVDE-NTICVA 207 (429)
Q Consensus 139 ~~~~~~~~~~g~~~~~~~vi~---~~~~h~s---~~~~~~~~G~~--v~~v--~~~~~~~~~d~~~l~~~i~~-~~~~v~ 207 (429)
.+ ++.|+. +...|.+ ....++..+.. +..+ +.+.+++.+|+++|++++.+ ++++|+
T Consensus 122 ~p-------------gD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~~~~g~iD~d~Le~~l~~~~pklIv 188 (475)
T PLN03226 122 QP-------------HDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLDESTGLIDYDKLEKKAMLFRPKLII 188 (475)
T ss_pred CC-------------CCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeecCCCCCcCHHHHHHHHhhcCCeEEE
Confidence 52 357776 3334544 22222222222 2223 34544588999999999875 666554
Q ss_pred EeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEE
Q 014163 208 AILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGW 287 (429)
Q Consensus 208 ~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~ 287 (429)
+ . .+.+|...|+++|.++|+++ |++++||+||+.+..+... .. ...+++|++++++|||+++|.| |+
T Consensus 189 ~-~-~S~~s~~~D~a~i~~ia~~~------ga~LlvD~AH~~Gli~~~~--~~--~p~~~~Div~~t~hK~L~GP~G-g~ 255 (475)
T PLN03226 189 A-G-ASAYPRDWDYARMRKIADKV------GALLMCDMAHISGLVAAQE--AA--SPFEYCDVVTTTTHKSLRGPRG-GM 255 (475)
T ss_pred E-e-cCcCCCccCHHHHHHHHHHc------CCEEEEEchhhhCcccCCC--CC--CCCCCCeEEEecCcccccCCCc-eE
Confidence 4 2 34468889999999999999 9999999999876542111 11 1124799999999999999999 77
Q ss_pred EEEeCCCCccccccc----ccCC--CCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhC
Q 014163 288 VVWRTKDDLPDELVF----HINY--LGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKT 361 (429)
Q Consensus 288 l~~~~~~~~~~~~~~----~~~~--~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~ 361 (429)
+++++. .... +.. ..+| .......+.++++++...+.++.++++.+...+++++.++..+++++|.+.|.+.
T Consensus 256 I~~~~~-~~~~-~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~ 333 (475)
T PLN03226 256 IFFRKG-PKPP-KGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSK 333 (475)
T ss_pred EEEchh-hccc-ccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhC
Confidence 777543 2110 000 0011 0011111223466666677888888988877788889999999999999999996
Q ss_pred CCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceeccc
Q 014163 362 GRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK 409 (429)
Q Consensus 362 ~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~ 409 (429)
+ ++++......+++.+.+.+. +++..++.+.|. +.||.+...
T Consensus 334 G-~~l~~~~t~~hi~lv~~~~~-gi~~~~~~~~L~----~~~I~~nk~ 375 (475)
T PLN03226 334 G-YKLVTGGTDNHLVLWDLRPL-GLTGSRVEKVLD----LAHITLNKN 375 (475)
T ss_pred C-CEEEcCCCCCCEEEEEccCC-CCCHHHHHHHHH----HCCCEECCC
Confidence 4 99987533467777776443 567778888888 899998764
No 140
>PRK06855 aminotransferase; Validated
Probab=99.88 E-value=4e-20 Score=183.72 Aligned_cols=332 Identities=9% Similarity=-0.076 Sum_probs=208.7
Q ss_pred CCCCcccccccc---CC-ChHHHHHHHHHHcCc-CCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchH
Q 014163 54 GNPRLNLASFVT---TW-MEPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (429)
Q Consensus 54 ~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~ 128 (429)
+.+.+.+..+.| .. +++.+.+++.+.+.. ....|....+..++++.+.+|+.+..|.+.+. ..+.+|+|+++
T Consensus 31 g~~~~~~~~G~p~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~---~~I~it~G~~~ 107 (433)
T PRK06855 31 GVKITWENIGDPIAKGEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITP---DDIIFFNGLGD 107 (433)
T ss_pred cccccccccCCCcccCCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCH---hHEEEcCcHHH
Confidence 345555666666 23 345577777776643 33456677789999999999999887876433 23889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHH-HhcCceeEEEeccC-CccccCHHHHHHHhh--hCCe
Q 014163 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA-RYFEVELKEVKLEE-GYYVMNPVKAVELVD--ENTI 204 (429)
Q Consensus 129 a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~-~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~--~~~~ 204 (429)
|+.+++. +.. .+++|++++++|+.+..+. ...|++++.+|+++ +++.+|+++|+++++ ++++
T Consensus 108 al~~~~~-l~~-------------~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~ 173 (433)
T PRK06855 108 AIAKIYG-LLR-------------REARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIA 173 (433)
T ss_pred HHHHHHH-hcC-------------CCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCce
Confidence 9987764 333 1368999999998876543 44588888899874 447899999999997 3578
Q ss_pred EEEEeeCCCccccccC---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCc--cccCCCCeeEEEEcCcccC
Q 014163 205 CVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE--WDFRLPLVKSINVSGHKYG 279 (429)
Q Consensus 205 ~v~~~~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~~~~~~d~~~~s~hK~~ 279 (429)
++++++|+||||.+-+ +++|+++|++| ++|+++|++|+.+.. ...... ..+.-..-.++..|.-|.+
T Consensus 174 ~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~------~~~II~De~Y~~l~~--~~~~~~sl~~~~~~~~~I~~~S~SK~~ 245 (433)
T PRK06855 174 GILLINPDNPTGAVYPKEILREIVDIAREY------DLFIICDEIYNNIVY--NGKKTVPLSEVIGDVPGIALKGISKEL 245 (433)
T ss_pred EEEEECCCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEecccccccc--CCCCCCCHHHHcCcCCeEEEecCcccc
Confidence 8999999999999854 67788889999 999999999987431 111110 0111111124455667766
Q ss_pred -CCCCCeEEEEEeCCC---CcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCH----HHHHHHHHHHHHHH
Q 014163 280 -LVYAGVGWVVWRTKD---DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF----EGYKNIMENCMGNA 351 (429)
Q Consensus 280 -~~p~g~g~l~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~----~g~~~~~~~~~~~~ 351 (429)
++++++||+++.+.. .+...+.......... .. ...+.+.++...+.. +.+++..+...+++
T Consensus 246 ~~pGlRiG~ii~p~~~~~~~~~~~~~~~~~~~~~~-------~~---~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~ 315 (433)
T PRK06855 246 PWPGSRCGWIEVYNADKDEVFKKYINSILNAKMIE-------VC---STTLPQMAIPRIMSHPEYKNYLKERNKRYEKRS 315 (433)
T ss_pred CCCcceEEEEEEeCCchhhHHHHHHHHHHHhhccc-------cC---CChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHH
Confidence 699999999874311 1111100000000000 01 122345555655532 34566677788899
Q ss_pred HHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCC--------------------------CCHHHHHHHHHHHHhccCce
Q 014163 352 RALREGLEKTGRFEILSKDVGVPLVAFSLKDSSA--------------------------HTVFEISEGLRKKLNRFQVV 405 (429)
Q Consensus 352 ~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~--------------------------~~~~~~~~~L~~~l~~~G~~ 405 (429)
+.+.+.|++++++.+. ++ ..++++|--.+... .+..++...| +.++|+.
T Consensus 316 ~~~~~~L~~~~~~~~~-~p-~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~~~~gV~ 390 (433)
T PRK06855 316 NIAYEKLKDVPGLKVN-RT-NGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYL---LASTGIC 390 (433)
T ss_pred HHHHHHHhcCCCeecc-CC-CeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHH---HHHcCEE
Confidence 9999999888666544 33 45655553222110 0233444332 2378998
Q ss_pred ecccCCCCCCCceEEEEEecc
Q 014163 406 YPQKLPMSYPWSTKLRVISHL 426 (429)
Q Consensus 406 ~~~~~~~~~~~~~~lRi~~~~ 426 (429)
+.+..... .....+|+|++.
T Consensus 391 v~PG~~F~-~~~~~~Rls~~~ 410 (433)
T PRK06855 391 VVPLSSFC-TELNGFRVTLLE 410 (433)
T ss_pred EecCCcCC-CCCCceEEEECC
Confidence 87652111 122348999975
No 141
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.88 E-value=1.7e-20 Score=182.57 Aligned_cols=307 Identities=16% Similarity=0.070 Sum_probs=198.0
Q ss_pred CCccccccccC-CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceE-eCCchHHHHHH
Q 014163 56 PRLNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVG-TVGSSEAIMLA 133 (429)
Q Consensus 56 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~-t~g~t~a~~~a 133 (429)
..++|....++ .++|.+.+++..++... ..|. .+... ++++.+++++|++++ ..++ |+|+++++..+
T Consensus 35 ~~i~l~~~~~~~~~~~~~~~~~~~~~~~~-~~y~-~~~~~----~lr~~ia~~~~~~~~-----~i~~~~~Ga~~~i~~~ 103 (361)
T PRK00950 35 SIIKLGSNENPLGPSPKAVEAIEKELSKI-HRYP-EPDAP----ELREALSKYTGVPVE-----NIIVGGDGMDEVIDTL 103 (361)
T ss_pred ceEEccCCCCCCCCCHHHHHHHHHHHHhh-cCCC-CCCHH----HHHHHHHHHhCCCHH-----HEEEeCCCHHHHHHHH
Confidence 34555555443 34566777666555431 2222 22223 455567888888652 2666 67888888777
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCC
Q 014163 134 GLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGST 213 (429)
Q Consensus 134 l~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~ 213 (429)
+.++.. .++.|+++.++|..+...++..|++++.+|.+.+ +.+|++++++.+++++++|++++|+|
T Consensus 104 ~~~~~~-------------~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~v~~~~p~n 169 (361)
T PRK00950 104 MRTFID-------------PGDEVIIPTPTFSYYEISAKAHGAKPVYAKREED-FSLDVDSVLNAITEKTKVIFLCTPNN 169 (361)
T ss_pred HHHhcC-------------CCCEEEEcCCChHHHHHHHHHcCCEEEEeecCCC-CCcCHHHHHHHhccCCCEEEEeCCCC
Confidence 766543 1257999999998888888999999999997654 78999999999988899999999999
Q ss_pred ccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcccc-CCCCeeEEEEcCcccCC-CCCCeEEEEEe
Q 014163 214 LTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYGL-VYAGVGWVVWR 291 (429)
Q Consensus 214 ~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~d~~~~s~hK~~~-~p~g~g~l~~~ 291 (429)
|||.+.|.++|.++|+++ ++++++|++|+.+. ........ ..+.+ .+..+..|.++ ++.++|+++..
T Consensus 170 ptG~~~~~~~l~~l~~~~------~~~li~De~y~~~~----~~~~~~~~~~~~~v-i~~~S~SK~~g~~GlRiG~~~~~ 238 (361)
T PRK00950 170 PTGNLIPEEDIRKILEST------DALVFVDEAYVEFA----EYDYTPLALEYDNL-IIGRTFSKVFGLAGLRIGYGFVP 238 (361)
T ss_pred CCCCCcCHHHHHHHHHHC------CcEEEEECchhhhC----ccchHHHHHhcCCE-EEEEeehHhhcCchhhcchhcCC
Confidence 999999999999999999 99999999997642 11111000 11222 34446667654 77789998763
Q ss_pred CCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCC
Q 014163 292 TKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-FEGYKNIMENCMGNARALREGLEKTGRFEILSKD 370 (429)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~-~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 370 (429)
+ + +...+..... .+ + ...+.+.+++..+. .+.+++..++..++++++.+.|. +.+. ++
T Consensus 239 ~-~-~~~~~~~~~~-------~~----~---~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~----~~~~-~~ 297 (361)
T PRK00950 239 E-W-LIDYYMRAKT-------PF----S---LTRLSQAAAIAALSDKEYIEKSIEHGIKSREYLYNELP----FKVY-PS 297 (361)
T ss_pred H-H-HHHHHHHhcC-------CC----C---CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcC----eeEC-CC
Confidence 3 2 2121111110 00 0 12233444444443 33456666777777777777665 4443 32
Q ss_pred CCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 371 VGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 371 ~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
..+++.+++. ..+..++.+.|. ++|+.+++.......+..++|+++++.
T Consensus 298 -~~~~i~~~~~---~~~~~~~~~~l~----~~gv~v~~~~~f~~~~~~~lRis~~~~ 346 (361)
T PRK00950 298 -EANFVLVDVT---PMTAKEFCEELL----KRGVIVRDCTSFRGLGDYYIRVSIGTF 346 (361)
T ss_pred -cceEEEEECC---CCCHHHHHHHHH----HCCEEEeeCCccCCCCCCeEEEECCCH
Confidence 4566666662 356778888887 889988765211123456799999753
No 142
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=1.5e-20 Score=182.89 Aligned_cols=309 Identities=16% Similarity=0.095 Sum_probs=203.0
Q ss_pred ccccccccCC-ChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHH
Q 014163 58 LNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (429)
Q Consensus 58 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a 136 (429)
++|....+.. ++|.+.+++.+.++.. .+....+..+++ +++++++|++.+ ..++|+|+++++..++.+
T Consensus 32 i~l~~n~~~~~~~~~v~~a~~~~~~~~--~~~p~~g~~~lr----~~ia~~~~~~~~-----~i~~t~G~~~~l~~~~~~ 100 (359)
T PRK03158 32 VKLASNENPYGPSPKVKEAIAAHLDEL--ALYPDGYAPELR----TKVAKHLGVDEE-----QLLFGAGLDEVIQMISRA 100 (359)
T ss_pred EEecCCCCCCCCCHHHHHHHHHHHHHh--hcCCCCcHHHHH----HHHHHHhCCCHH-----HEEECCCHHHHHHHHHHH
Confidence 3344444433 4566778777665432 122334555554 456777787642 388999999999877777
Q ss_pred HHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccc
Q 014163 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (429)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG 216 (429)
+.+ .++.|+++.++|..+...+...|+++..+|++ + +.+|+++++++++++++++++++|+||||
T Consensus 101 ~~~-------------~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~-~-~~~d~~~l~~~~~~~~~~v~i~~p~NPtG 165 (359)
T PRK03158 101 LLN-------------PGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK-D-GGHDLEAMLKAIDEQTKIVWICNPNNPTG 165 (359)
T ss_pred HhC-------------CCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC-C-CCcCHHHHHHhcCCCCCEEEEeCCCCCCC
Confidence 643 23689999999999999999999999999987 3 67999999999988899999999999999
Q ss_pred cccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCc-cc-cCCCCeeEEEEcCcccCC-CCCCeEEEEEeCC
Q 014163 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WD-FRLPLVKSINVSGHKYGL-VYAGVGWVVWRTK 293 (429)
Q Consensus 217 ~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~-~~~~~~d~~~~s~hK~~~-~p~g~g~l~~~~~ 293 (429)
.+.+.++|.++++.... ++++++|++|..+.. ...... .. +....-..+..+.-|.++ ++.++||++...
T Consensus 166 ~~~~~~~l~~~~~~~~~----~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~- 238 (359)
T PRK03158 166 TYVNHEELLSFLESVPS----HVLVVLDEAYYEYVT--AEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASE- 238 (359)
T ss_pred CCCCHHHHHHHHHhCCC----CcEEEEECchHhhcC--CcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCH-
Confidence 99999999999987311 899999999986432 111000 00 111112344456667654 778899987643
Q ss_pred CCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCC
Q 014163 294 DDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-FEGYKNIMENCMGNARALREGLEKTGRFEILSKDVG 372 (429)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~-~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 372 (429)
+.+ +.+..... .+ + ...+++.++...+. .+.+++..+...++++++.+.|++.+ +.+. ++ .
T Consensus 239 ~~~-~~~~~~~~-------~~---~----~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~-~~-~ 300 (359)
T PRK03158 239 ELI-EKLNIARP-------PF---N----TTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKEYG-LFYY-PS-Q 300 (359)
T ss_pred HHH-HHHHHhcC-------CC---C----CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-CeeC-CC-c
Confidence 222 22211100 01 1 23344555555554 33455666777788888999998884 7664 32 4
Q ss_pred ceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 373 VPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 373 ~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
.+++.+.+. .+..++.+.|. ++|+.+.+..... ...++|++++.+
T Consensus 301 g~~i~~~~~----~~~~~~~~~l~----~~gv~v~~g~~f~--~~~~iRi~~~~~ 345 (359)
T PRK03158 301 TNFIFVDTG----RDANELFEALL----KKGYIVRSGAALG--FPTGVRITIGLK 345 (359)
T ss_pred CcEEEEECC----CCHHHHHHHHH----HCCeEEeeCCCCC--CCCeEEEecCCH
Confidence 455555442 34567777777 8999987652222 245799999764
No 143
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.88 E-value=3e-21 Score=186.92 Aligned_cols=313 Identities=14% Similarity=0.025 Sum_probs=201.4
Q ss_pred CChHHHHHHHHHHc----CcCCCCCccC---hhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCC-chHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASI----NKNYVDMDEY---PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVG-SSEAIMLAGLAFK 138 (429)
Q Consensus 67 ~~~~~~~~~~~~~~----~~~~~~~~~~---~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g-~t~a~~~al~a~~ 138 (429)
..++.+.+++..++ +.+.+.+..+ +...++.+++++.+++++|.+.+ ...++|+| +|+|+..++..+.
T Consensus 9 ~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~----~~vvf~~gs~T~a~~~~~~~l~ 84 (355)
T cd00611 9 ALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDN----YKVLFLQGGATGQFAAVPLNLL 84 (355)
T ss_pred CCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCC----ceEEEEcCCchHHHHHHHHhcC
Confidence 44567888887776 2233333334 45567778999999999998542 24888887 9999998888773
Q ss_pred HHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccC-HHHHHHHhhhCCeEEEEeeCCCcccc
Q 014163 139 RKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMN-PVKAVELVDENTICVAAILGSTLTGE 217 (429)
Q Consensus 139 ~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d-~~~l~~~i~~~~~~v~~~~~~~~tG~ 217 (429)
.+ +. ..++|+.....|. +.+.++..|++++.++++++....+ ++..+..+++++++|.++|.+|.||.
T Consensus 85 ~~--------~~--~~~~i~~g~~~~~-~~~~a~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~lV~~~h~~t~tG~ 153 (355)
T cd00611 85 GD--------KG--TADYVVTGAWSAK-AAKEAKRYGGVVVIVAAKEEGKYTKIPDVETWDLAPDAAYVHYCSNETIHGV 153 (355)
T ss_pred CC--------CC--eEEEEECCHHHHH-HHHHHHhcCCCcEEEecccccCCCCCCCHhhcCCCCCCCEEEEeCCcccccE
Confidence 21 10 1134444333333 3446688899999999864311224 33334456778999999999999999
Q ss_pred ccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcc
Q 014163 218 FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP 297 (429)
Q Consensus 218 ~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~ 297 (429)
.. . ++++.| |++++||++++.+..++ |+. ..|+..+++||++ +|.|+|+++++++.. .
T Consensus 154 ~~--~---~i~~~~------g~~~~VDa~qs~g~~~i-------dv~--~~~~~~ss~~K~l-GP~G~g~l~~~~~~~-~ 211 (355)
T cd00611 154 EF--D---EVPDTG------GVPLVADMSSNILSRPI-------DVS--KFGVIYAGAQKNL-GPAGVTVVIVRKDLL-G 211 (355)
T ss_pred Ec--c---eecccC------CCeEEEEccccccCCCC-------CHH--HhCEEEeeccccc-CCCceEEEEECHHHH-h
Confidence 82 2 455568 99999999998765432 332 2334446699976 699999999976422 1
Q ss_pred cccccccCCCCCCC--CCceeccCCchhHHHHHHHHHHHcCHH-HHHHHHHHHHHHHHHHHHHHHhCCCeE-EeeCC-CC
Q 014163 298 DELVFHINYLGSDQ--PTFTLNFSKGSSQIIAQYYQFIRLGFE-GYKNIMENCMGNARALREGLEKTGRFE-ILSKD-VG 372 (429)
Q Consensus 298 ~~~~~~~~~~~~~~--~~~~~~~tr~~~~~~~~~~al~~l~~~-g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~-~~ 372 (429)
+.-...+.+..... ......+|++...++++.++++.+..+ |++++.++.+++++++++.|++++++. ...++ .+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~r 291 (355)
T cd00611 212 KARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRAR 291 (355)
T ss_pred hcccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHc
Confidence 11011111110000 011124789888899999999999888 799999999999999999999997653 21111 13
Q ss_pred c-eEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEecc
Q 014163 373 V-PLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHL 426 (429)
Q Consensus 373 ~-~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~ 426 (429)
. .+++|++.+. ....++...+. ++|++...... ....+|+|+..
T Consensus 292 s~~vvsf~~~~~--~l~~~~~~~~~----r~G~~~~~~~~----~~g~vR~S~~~ 336 (355)
T cd00611 292 SRMNVPFRLGKE--ELEKEFLKEAE----AAGMIGLKGHR----SVGGIRASIYN 336 (355)
T ss_pred CceEEEEEcCCh--hhhHHHHHHHH----HCCCcccCCCc----ccCeEEEEccC
Confidence 4 4689987542 01123333444 89997433221 12469999854
No 144
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.88 E-value=3.1e-20 Score=180.62 Aligned_cols=319 Identities=15% Similarity=0.063 Sum_probs=201.2
Q ss_pred CCCCCccccccccC--CChHHHHHHHHHHcCcCCCCCcc---ChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCch
Q 014163 53 DGNPRLNLASFVTT--WMEPECDKLVMASINKNYVDMDE---YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS 127 (429)
Q Consensus 53 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t 127 (429)
+++..++|.++.+- +.+|.+.+++..++......+.. ..+...+..++++.+++++|.+. .+++++|+
T Consensus 14 ~g~~~id~~~~~~~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~-------~i~~~~G~ 86 (360)
T TIGR00858 14 DGRRLLNFSSNDYLGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKGTEA-------ALLFSSGY 86 (360)
T ss_pred CCceEEecccCCcccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCC-------EEEECchH
Confidence 45555556665542 23467888887776542221111 12334455567777888888643 45555567
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhh----CC
Q 014163 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE----NT 203 (429)
Q Consensus 128 ~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~----~~ 203 (429)
+++..++.++.. .+++|++++++|.++...++..|++++.++. +|++.|++.+++ ++
T Consensus 87 ~~~~~~l~~~~~-------------~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~------~d~~~l~~~~~~~~~~~~ 147 (360)
T TIGR00858 87 LANVGVISALVG-------------KGDLILSDALNHASLIDGCRLSGARVRRYRH------NDVEHLERLLEKNRGERR 147 (360)
T ss_pred HHHHHHHHHhCC-------------CCCEEEEEccccHHHHHHHHhcCCceEEecC------CCHHHHHHHHHHcccCCC
Confidence 777766655432 2368999999999999999999999887762 588899998875 46
Q ss_pred eEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCc--cccCCCCeeEEEEcCcccCCC
Q 014163 204 ICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE--WDFRLPLVKSINVSGHKYGLV 281 (429)
Q Consensus 204 ~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~~~~~~d~~~~s~hK~~~~ 281 (429)
++|++.++.|++|.+.|+++|.++|+++ ++++++|++|+.+.......... ..+...+.|++..+.+|+++.
T Consensus 148 ~~v~~~~~~~~~G~~~~~~~i~~l~~~~------~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~ 221 (360)
T TIGR00858 148 KLIVTDGVFSMDGDIAPLPQLVALAERY------GAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGS 221 (360)
T ss_pred eEEEEeCCccCCCCCcCHHHHHHHHHHc------CcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhc
Confidence 7888888889999999999999999999 99999999997533211100000 011112568888899998754
Q ss_pred CCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhC
Q 014163 282 YAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKT 361 (429)
Q Consensus 282 p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~ 361 (429)
.| |+++.++ +.. +.+..... .+...++.+.....+..++++.+.. .++..++..++++++.+.|+++
T Consensus 222 -~g-G~~~~~~-~~~-~~~~~~~~-------~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~ 288 (360)
T TIGR00858 222 -YG-AYVAGSQ-ALI-DYLINRAR-------TLIFSTALPPAVAAAALAALELIQE--EPWRREKLLALIARLRAGLEAL 288 (360)
T ss_pred -cC-cEEEcCH-HHH-HHHHHhCc-------cceecCCCCHHHHHHHHHHHHHHhh--CHHHHHHHHHHHHHHHHHHHHc
Confidence 55 7776532 221 21111000 0011112222333444555554322 3567788999999999999998
Q ss_pred CCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceeccc-CCCCCCCceEEEEEec
Q 014163 362 GRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK-LPMSYPWSTKLRVISH 425 (429)
Q Consensus 362 ~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~-~~~~~~~~~~lRi~~~ 425 (429)
+ +++. ++ ..+++.+.+.. ..+..++.+.|. ++|+.+... .+....+..++|++++
T Consensus 289 ~-~~~~-~~-~~~~~~~~~~~--~~~~~~~~~~l~----~~gI~v~~~~~~~~~~~~~~iRis~~ 344 (360)
T TIGR00858 289 G-FTLM-PS-CTPIVPVIIGD--NASALALAEELQ----QQGIFVGAIRPPTVPAGTSRLRLTLS 344 (360)
T ss_pred C-CccC-CC-CCCEEEEEeCC--HHHHHHHHHHHH----HCCeeEeeeCCCCCCCCCceEEEEEc
Confidence 6 7655 22 46677777632 234456666666 899998753 2222234457999997
No 145
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.88 E-value=7.3e-21 Score=184.89 Aligned_cols=305 Identities=19% Similarity=0.153 Sum_probs=201.6
Q ss_pred CCCccccccccCC-ChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHH
Q 014163 55 NPRLNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLA 133 (429)
Q Consensus 55 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~a 133 (429)
+..+.|....+++ +++.+.+++...+... ..| ...+..+++ +.+++++|++++ .+++|+|+++++.++
T Consensus 29 ~~~i~l~~nen~~~~~~~v~~a~~~~~~~~-~~Y-p~~g~~~Lr----~aia~~~~~~~~-----~I~vt~Gs~e~i~~~ 97 (366)
T PRK01533 29 HSFVKLASNENPFGCSPRVLDELQKSWLDH-ALY-PDGGATTLR----QTIANKLHVKME-----QVLCGSGLDEVIQII 97 (366)
T ss_pred CceEEeCCCCCCCCCCHHHHHHHHHHHHhc-CcC-CCCCHHHHH----HHHHHHhCCCcc-----eEEECCCHHHHHHHH
Confidence 4445566666654 4566888777665432 112 233444444 456777788763 489999999999988
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCC
Q 014163 134 GLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGST 213 (429)
Q Consensus 134 l~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~ 213 (429)
+.++.+ .++.|+++.++|..+...++..|++++.||+++ +.+|+++|++++++++++|++++|+|
T Consensus 98 ~~~l~~-------------~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~--~~~d~~~l~~~~~~~~~~v~i~~P~N 162 (366)
T PRK01533 98 SRAVLK-------------AGDNIVTAGATFPQYRHHAIIEGCEVKEVALNN--GVYDLDEISSVVDNDTKIVWICNPNN 162 (366)
T ss_pred HHHhcC-------------CCCEEEEcCCcHHHHHHHHHHcCCEEEEeecCC--CCcCHHHHHHHhCcCCcEEEEeCCCC
Confidence 888754 136899999999999999999999999999864 46999999999988899999999999
Q ss_pred ccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCc-cc-c-CCCCeeEEEEcCcc-cCCCCCCeEEEE
Q 014163 214 LTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WD-F-RLPLVKSINVSGHK-YGLVYAGVGWVV 289 (429)
Q Consensus 214 ~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~-~-~~~~~d~~~~s~hK-~~~~p~g~g~l~ 289 (429)
|||.+.+.+++.++++...+ +.++++|++|..+.. ...... .. + ..+++-. ..|.-| +++++.++||++
T Consensus 163 PTG~~~~~~~l~~l~~~~~~----~~~~iiDe~y~~~~~--~~~~~~~~~~~~~~~~vi~-~~SfSK~~~l~GlRiG~~i 235 (366)
T PRK01533 163 PTGTYVNDRKLTQFIEGISE----NTLIVIDEAYYEYVT--AKDFPETLPLLEKHKNILV-LRTFSKAYGLASFRVGYAV 235 (366)
T ss_pred CCCCCcCHHHHHHHHHhCCC----CCEEEEEccHHHhhc--cccCcchhHHhccCCCEEE-EeCchHHhcChHHHHhHHh
Confidence 99999887777776654211 346788999975431 100000 00 1 1123333 345556 556899999987
Q ss_pred EeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHHHHHHhCCCeEEee
Q 014163 290 WRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF-EGYKNIMENCMGNARALREGLEKTGRFEILS 368 (429)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~-~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 368 (429)
.. ++.. +.+.... . . .+ ...+++.++...+.. +..++..+...+.++++.+.++.++ +++..
T Consensus 236 ~~-~~~~-~~l~~~~----~---~----~~---~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~~g-~~~~~ 298 (366)
T PRK01533 236 GH-EELI-EKLNVVR----L---P----FN---VSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKENE-IPFYQ 298 (366)
T ss_pred CC-HHHH-HHHHHhc----C---C----CC---cCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC-CccCC
Confidence 53 3222 2221110 0 0 11 234456666666643 3455666777788888888888875 76553
Q ss_pred CCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 369 KDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 369 ~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
+ +.+++.+++. +..++.+.|. ++||.++.+ . .++|||++.+
T Consensus 299 -~-~~nf~~~~~~-----~~~~~~~~l~----~~GI~Vr~~-----~--~~iRis~~~~ 339 (366)
T PRK01533 299 -S-QTNFIFLPVE-----NGGEIYEACA----HAGFIIRPF-----P--NGVRITVGTR 339 (366)
T ss_pred -C-cCcEEEEeCC-----CHHHHHHHHH----HCCcEEccC-----C--CceEEeCCCH
Confidence 3 5677777653 2356777777 999999862 2 4599999865
No 146
>PRK09105 putative aminotransferase; Provisional
Probab=99.88 E-value=2.8e-20 Score=181.11 Aligned_cols=304 Identities=17% Similarity=0.094 Sum_probs=200.7
Q ss_pred cccccccCC-ChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHH
Q 014163 59 NLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF 137 (429)
Q Consensus 59 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~ 137 (429)
.|....++. ++|.+.+++...+... ..|. .+... ++++.+++.+|++++ .+++|+|+++++.+++.++
T Consensus 47 ~l~~~~~~~~~~~~~~~a~~~~~~~~-~~Y~-~~~~~----~Lr~aia~~~~v~~e-----~I~it~Gs~~ai~~~~~~l 115 (370)
T PRK09105 47 FLNANECPLGPSPAARDAAARSAALS-GRYD-LELED----DLRTLFAAQEGLPAD-----HVMAYAGSSEPLNYAVLAF 115 (370)
T ss_pred EecCCCCCCCCCHHHHHHHHHHHHHh-cCCC-CchHH----HHHHHHHHHhCcChh-----hEEEcCChHHHHHHHHHHH
Confidence 344444443 4566777776665321 2232 22233 455567888898763 3889999999999998887
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCcccc
Q 014163 138 KRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGE 217 (429)
Q Consensus 138 ~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~ 217 (429)
.+ .+++|++++++|..+..+++..|++++.+|.+++ +.+|++++++. .++++++++++|+||||.
T Consensus 116 ~~-------------~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~-~~~~~~v~l~nP~NPTG~ 180 (370)
T PRK09105 116 TS-------------PTAGLVTADPTYEAGWRAADAQGAPVAKVPLRAD-GAHDVKAMLAA-DPNAGLIYICNPNNPTGT 180 (370)
T ss_pred cC-------------CCCEEEEeCCChHHHHHHHHHcCCeEEEecCCCC-CCCCHHHHHhc-CCCCCEEEEeCCCCCCCc
Confidence 54 1368999999999999999999999999998765 78999999887 567889999999999999
Q ss_pred ccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEE-cCcccC-CCCCCeEEEEEeCCCC
Q 014163 218 FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINV-SGHKYG-LVYAGVGWVVWRTKDD 295 (429)
Q Consensus 218 ~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~-s~hK~~-~~p~g~g~l~~~~~~~ 295 (429)
+.+.++|.++++.+.+ ++|+++|++|..+.. .+ ...++.....+++++ +..|.+ ++++++||++... +.
T Consensus 181 ~~~~~~l~~l~~~~~~----~~~lIvDEaY~~f~~---~~-s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~-~~ 251 (370)
T PRK09105 181 VTPRADIEWLLANKPA----GSVLLVDEAYIHFSD---AP-SVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARP-DL 251 (370)
T ss_pred CcCHHHHHHHHHhCCC----CcEEEEECchHHhcc---Cc-chHHHHhhCCCEEEEecccHhhcCCccceeeeecCH-HH
Confidence 9999999888764311 899999999965321 11 001111112344444 445654 6888899988642 22
Q ss_pred cccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCce
Q 014163 296 LPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-FEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVP 374 (429)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~-~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~ 374 (429)
. +.+.. . .. .+ .....+.+++..+. .+.+++..++..++++++.+.|++.+ +++.. + ..+
T Consensus 252 i-~~l~~---~-~~--------~~---~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~-~-~~~ 312 (370)
T PRK09105 252 L-AKLAR---F-GH--------NP---LPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKKG-YKCTP-S-QAN 312 (370)
T ss_pred H-HHHHh---c-CC--------CC---cCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHCC-CCcCC-C-CCc
Confidence 2 22211 1 00 11 12233444554443 34456677888899999999999875 76553 3 456
Q ss_pred EEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 375 LVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 375 ~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
++.+++. .+..++.+.|. ++|+.+...++ ....++|++++.+
T Consensus 313 f~~~~~~----~~~~~l~~~L~----~~gI~v~~~~~---~~~~~~Ris~~~~ 354 (370)
T PRK09105 313 CFMVDVK----RPAKAVADAMA----KQGVFIGRSWP---IWPNWVRVTVGSE 354 (370)
T ss_pred EEEEeCC----CCHHHHHHHHH----HCCcEEecCCC---CCCCeEEEEcCCH
Confidence 6655542 24567777777 88998843221 1245799999864
No 147
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.87 E-value=6.7e-20 Score=181.21 Aligned_cols=340 Identities=14% Similarity=0.062 Sum_probs=211.6
Q ss_pred HHHHHHHHHHhhccC-CCCCccccccccCCC-hHHHHHHHHHHcCc-----CCCCCccChhhHHHHHHHHHHHHHhhCCC
Q 014163 39 KEAAYQVINDELMLD-GNPRLNLASFVTTWM-EPECDKLVMASINK-----NYVDMDEYPVTTELQNRCVNMIAHLFNTP 111 (429)
Q Consensus 39 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~le~~~~~~la~l~g~~ 111 (429)
++++.+.+.+.-..+ +...++|+.+.++.. ++.+.+++.+++.. ....|...++..++++.+.+++.+..|++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~ 96 (409)
T PRK07590 17 FPEIARRVNAFREANPEAKIIRLGIGDVTQPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCD 96 (409)
T ss_pred HHHHHHHHHHHhhhcCCCceEEecCcCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCc
Confidence 445555454443333 233467788887754 45577777776654 23346666788999999998887777765
Q ss_pred CCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCce-----------eEE
Q 014163 112 VADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVE-----------LKE 180 (429)
Q Consensus 112 ~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~-----------v~~ 180 (429)
.+. ..+.+|+|+++++.+.+ .+.+ .++.|++++|+|..+...++..|.+ ++.
T Consensus 97 ~~~---~~I~it~Ga~~al~~l~-~~~~-------------~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 159 (409)
T PRK07590 97 ISA---DEIFISDGAKCDTGNIL-DIFG-------------PDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVY 159 (409)
T ss_pred CCh---hhEEECCCHHHHHHHHH-HhcC-------------CCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeE
Confidence 432 24889999999987643 3322 2368999999999999999999987 888
Q ss_pred EeccC-CccccCHHHHHHHhhhCCeEEEEeeCCCcccccc---ChHHHHHHHHHhhhccCCCccEEeecccccccccccC
Q 014163 181 VKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY 256 (429)
Q Consensus 181 v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~---~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~ 256 (429)
+|+++ +++.+|.+ ++++++|++++|+||||.+- .+++|+++|++| ++++++|++|+.+.. .
T Consensus 160 v~~~~~~~~~~d~~------~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~------~~~iI~De~Y~~~~~---~ 224 (409)
T PRK07590 160 LPCTAENNFVPELP------EEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKEN------GSLILFDAAYEAFIS---D 224 (409)
T ss_pred eecccccCCcccCc------ccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHc------CeEEEEEccchhhcc---C
Confidence 98874 33555532 25789999999999999984 467788889999 999999999986431 1
Q ss_pred CCCcccc-CCCC---eeEEEEcCcccC-CCCCCeEEEEEeCCCCcccccc------cccCCCCCCCCCceeccCCchhHH
Q 014163 257 PDLEWDF-RLPL---VKSINVSGHKYG-LVYAGVGWVVWRTKDDLPDELV------FHINYLGSDQPTFTLNFSKGSSQI 325 (429)
Q Consensus 257 ~~~~~~~-~~~~---~d~~~~s~hK~~-~~p~g~g~l~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~tr~~~~~ 325 (429)
......+ ..+. -.++..|.-|.+ +++.++||++..+ +.+ +.+. ....+....... . .+ ...
T Consensus 225 ~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~~i~~~-~li-~~~~~~~~~~~~~~~~~~~~~~--~-~~---~s~ 296 (409)
T PRK07590 225 PSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAYTVVPK-ELK-GKTSDGEGVSLNSLWNRRQSTK--F-NG---VSY 296 (409)
T ss_pred CCCCcchhhCCCcccceEEEecCccccCCcCceeEEEEcCH-HHh-hhccccchhhhHHHHHHHHhhc--c-cC---cCH
Confidence 1100111 1111 123344666765 6899999988743 222 1100 000000000000 0 01 123
Q ss_pred HHHHHHHHHc---CHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhcc
Q 014163 326 IAQYYQFIRL---GFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRF 402 (429)
Q Consensus 326 ~~~~~al~~l---~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~ 402 (429)
+.+.++...+ +...+++..++..++++++.+.|++.+ +++..+. ....+.+++++ ..+..++.+.|.+ +.
T Consensus 297 ~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~~~~-g~~f~wi~~~~--~~~~~~~~~~l~~---~~ 369 (409)
T PRK07590 297 IVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGLESAG-FEVYGGV-NAPYIWVKTPD--GMSSWDFFDKLLQ---EA 369 (409)
T ss_pred HHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcC-CceecCC-cceEEEEECCC--CCCHHHHHHHHHH---HC
Confidence 3444444434 234456677788888999999999885 7655332 34455566543 3566677776651 56
Q ss_pred CceecccCCCCCCCceEEEEEec
Q 014163 403 QVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 403 G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
|+.+.+.......+..++||++.
T Consensus 370 gv~v~pg~~f~~~~~~~iRi~~~ 392 (409)
T PRK07590 370 NVVGTPGSGFGPSGEGYFRLSAF 392 (409)
T ss_pred CEEEeChhHhCCCCCCEEEEEcc
Confidence 98887652112234568999964
No 148
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.87 E-value=5.6e-20 Score=163.68 Aligned_cols=309 Identities=14% Similarity=0.088 Sum_probs=222.5
Q ss_pred HHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCC
Q 014163 72 CDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKP 151 (429)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~ 151 (429)
+.+.+.++++.|...+ .+|...++.+++++-+...|...... .-++...|+.+...++..... +
T Consensus 28 l~~~V~~A~~~~~lgh-~sPe~~qIm~~v~egikyVFkT~n~~----tf~isgsGh~g~E~al~N~le--------P--- 91 (385)
T KOG2862|consen 28 LSGRVQEAMSRPSLGH-MSPEFVQIMDEVLEGIKYVFKTANAQ----TFVISGSGHSGWEAALVNLLE--------P--- 91 (385)
T ss_pred CCHHHHHhhcCCcccc-CCHHHHHHHHHHHHHHHHHhccCCCc----eEEEecCCcchHHHHHHhhcC--------C---
Confidence 3345666666665433 57888999999999999999876532 244555666677766666554 1
Q ss_pred CCCcEEEEcCCCch--HHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhh-CCeEEEEeeCCCccccccC-hHHHHHH
Q 014163 152 YDKPNIVTGANVQV--CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFED-VKLLHDL 227 (429)
Q Consensus 152 ~~~~~vi~~~~~h~--s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~tG~~~~-l~~I~~l 227 (429)
++.|++-...-. -+...++.+|++|..|+.+.+ ....++.+++++.. ++++|+++++.+.||..+| ++.+.++
T Consensus 92 --gd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~G-~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~g~l 168 (385)
T KOG2862|consen 92 --GDNVLVVSTGTWGQRAADCARRYGAEVDVVEADIG-QAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAISGEL 168 (385)
T ss_pred --CCeEEEEEechHHHHHHHHHHhhCceeeEEecCcc-cCccHHHHHHHHHhcCCceEEEEecCccccccchHHHHHHHH
Confidence 245555444333 366778999999999988876 68999999999987 4689999999999999999 7778899
Q ss_pred HHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCccccccccc---
Q 014163 228 LTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHI--- 304 (429)
Q Consensus 228 a~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~--- 304 (429)
|++| +++++||++.+-+..+|..+++ ++|+.-..++|.+.+|.|.+.+.++++.. ..++...
T Consensus 169 c~k~------~~lllVD~VaSlggt~F~mDew-------gVDvaytgSQKaL~aP~GLsiisfS~ka~--~~~~~rK~~~ 233 (385)
T KOG2862|consen 169 CHKH------EALLLVDTVASLGGTEFEMDEW-------GVDVAYTGSQKALGAPAGLSIISFSDKAL--EAIRDRKTKP 233 (385)
T ss_pred hhcC------CeEEEEechhhcCCccceehhh-------cccEEEecchhhcCCCCCcceeecCHHHH--HHHhhccCCc
Confidence 9999 9999999988765566655444 69999999999999999999987765422 1111110
Q ss_pred ------------CCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC-
Q 014163 305 ------------NYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV- 371 (429)
Q Consensus 305 ------------~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~- 371 (429)
.|..+..+. -+..|.+.....++.++|..+-++|+++.+++++++++++...|++.+ +++....+
T Consensus 234 ~~~yFd~~~~~~~wgc~~e~~-~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~G-Lq~fv~~e~ 311 (385)
T KOG2862|consen 234 VSFYFDILRLGNFWGCDGEPR-AYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEALG-LQLFVVDEE 311 (385)
T ss_pred eEEEEeHHhhcchhccCCccc-ccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-ccceecChh
Confidence 111111111 123678888889999999999999999999999999999999999987 77655432
Q ss_pred -Cc-eEEEEEecCCCCCCHHHHHHHHHHHHhccC-ceecccCCCCCCCceEEEEEe
Q 014163 372 -GV-PLVAFSLKDSSAHTVFEISEGLRKKLNRFQ-VVYPQKLPMSYPWSTKLRVIS 424 (429)
Q Consensus 372 -~~-~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G-~~~~~~~~~~~~~~~~lRi~~ 424 (429)
++ .+..+.++ .++|..++..++. +++ +.+.-...+ ....++||-+
T Consensus 312 ~rlptvttv~vp--~gvDw~dVv~~~~----~~~~vei~gglg~--~~gKv~RIGl 359 (385)
T KOG2862|consen 312 LRLPTVTTVKVP--YGVDWKDVVAYAM----SHYVVEIGGGLGP--TVGKVFRIGL 359 (385)
T ss_pred hccCcceeeecC--CCCCHHHHHHHHH----HhcCEEeccccCC--CcccEEEEEE
Confidence 33 34555554 3789999999988 664 443321111 2334689865
No 149
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.87 E-value=3.9e-20 Score=180.49 Aligned_cols=313 Identities=15% Similarity=0.068 Sum_probs=207.2
Q ss_pred CCCccccccccC-CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHH
Q 014163 55 NPRLNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLA 133 (429)
Q Consensus 55 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~a 133 (429)
...++|....++ .++|.+.+++.+.+.. ...|... ... ++++.+++++|++++ .+.+|+|+++++..+
T Consensus 32 ~~~i~l~~~~~~~~~~~~~~~a~~~~~~~-~~~y~~~-~~~----~lr~~ia~~~~~~~~-----~i~~t~G~~~~l~~~ 100 (367)
T PRK02731 32 ADIIKLASNENPLGPSPKAIEAIRAAADE-LHRYPDG-SGF----ELKAALAEKFGVDPE-----RIILGNGSDEILELL 100 (367)
T ss_pred CceEEecCCCCCCCCCHHHHHHHHHHHHh-hcCCCCC-cHH----HHHHHHHHHhCcCHH-----HEEEcCCHHHHHHHH
Confidence 344555555433 3456677777766542 2223222 223 455557888888652 388999999998777
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCC
Q 014163 134 GLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGST 213 (429)
Q Consensus 134 l~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~ 213 (429)
+.++.+ .++.|+++.++|..+...++..|++++.+|.+ ++.+|++++++++++++++|++++++|
T Consensus 101 ~~~l~~-------------~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~--~~~~~~~~l~~~~~~~~~~v~l~~p~n 165 (367)
T PRK02731 101 ARAYLG-------------PGDEVIYSEHGFAVYPIAAQAVGAKPVEVPAK--DYGHDLDAMLAAVTPRTRLVFIANPNN 165 (367)
T ss_pred HHHhcC-------------CCCEEEEecCCHHHHHHHHHHcCCeEEEeccc--CCCCCHHHHHHHhCCCCcEEEEeCCCC
Confidence 766543 13689999999988888888999999999884 367999999999998899999999999
Q ss_pred ccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCC-CCcccc-C-CCCeeEEEEcCcccC-CCCCCeEEEE
Q 014163 214 LTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYP-DLEWDF-R-LPLVKSINVSGHKYG-LVYAGVGWVV 289 (429)
Q Consensus 214 ~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~-~~~~~~-~-~~~~d~~~~s~hK~~-~~p~g~g~l~ 289 (429)
|||.+.+.++|.++++.+.+ ++++++|++|..+.. ... ....+. . .+. ..+..+..|.+ .++.++||++
T Consensus 166 ptG~~~~~~~l~~l~~~~~~----~~~li~De~y~~~~~--~~~~~~~~~~~~~~~~-~i~~~S~SK~~g~~G~RiG~l~ 238 (367)
T PRK02731 166 PTGTYLPAEEVERFLAGVPP----DVLVVLDEAYAEYVR--RKDYEDGLELVAKFPN-VVVTRTFSKAYGLAGLRVGYGI 238 (367)
T ss_pred CCCcCCCHHHHHHHHHhCCC----CcEEEEECcHHHhcc--CcCcccHHHHHhhcCC-EEEEeeehHhhcCcccceeeee
Confidence 99999999999999987411 899999999976431 110 001111 1 122 23334555754 5778899988
Q ss_pred EeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEee
Q 014163 290 WRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-FEGYKNIMENCMGNARALREGLEKTGRFEILS 368 (429)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~-~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 368 (429)
.++ +.. +.+..... .+. .....++++...+. .+.+++..++..++++++.+.|++.+ +.+.
T Consensus 239 ~~~-~~~-~~l~~~~~-------~~~-------~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~- 300 (367)
T PRK02731 239 APP-EII-DALNRVRQ-------PFN-------VNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAELG-LEYI- 300 (367)
T ss_pred CCH-HHH-HHHHHccC-------CCC-------CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCC-CccC-
Confidence 643 222 22211110 111 12345566666664 34467777888889999999999884 7665
Q ss_pred CCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 369 KDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 369 ~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
++ ..+++.+++++ ..+..++.+.|. ++|+.++...... ...++|+++++.
T Consensus 301 ~~-~g~~~~i~~~~--~~~~~~~~~~L~----~~gI~v~~~~~~~--~~~~iRis~~~~ 350 (367)
T PRK02731 301 PS-VGNFILVDFDD--GKDAAEAYQALL----KRGVIVRPVAGYG--LPNALRITIGTE 350 (367)
T ss_pred CC-CceEEEEECCC--CCCHHHHHHHHH----HCCEEEEeCCCCC--CCCeEEEecCCH
Confidence 33 56777777632 456778888887 8999987652211 235799999753
No 150
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.87 E-value=7.8e-20 Score=180.27 Aligned_cols=338 Identities=15% Similarity=0.122 Sum_probs=206.8
Q ss_pred HHHHHHHHHhhccCCCCCccccccccCCChHHHHHHHHHHc-CcCCCCC------ccChhhHHHHHHHHHHHHHhhCCCC
Q 014163 40 EAAYQVINDELMLDGNPRLNLASFVTTWMEPECDKLVMASI-NKNYVDM------DEYPVTTELQNRCVNMIAHLFNTPV 112 (429)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~le~~~~~~la~l~g~~~ 112 (429)
+++.+.+.+....+ +..+++..-.. ..+|.+.+++...+ +.....+ ...+...++|+-+.+.+++++|.+.
T Consensus 14 ~~~~~~~~~~~~~~-~~~~~l~~sen-~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~~ 91 (416)
T PRK13034 14 DEVFAAINKELERQ-QDHLELIASEN-FTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFGCDY 91 (416)
T ss_pred HHHHHHHHHHHHHH-hcCeeeccccc-CCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhCCCc
Confidence 35555555443322 33343333221 34688888887774 4432211 1235677888767778999999874
Q ss_pred CCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchH-HHHHHHh--cCcee--EEEeccCCc
Q 014163 113 ADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC-WEKFARY--FEVEL--KEVKLEEGY 187 (429)
Q Consensus 113 ~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s-~~~~~~~--~G~~v--~~v~~~~~~ 187 (429)
..+++++|+.||..++.++.. .+++|++++..|.+ +...++. .+... ..++.+..+
T Consensus 92 ------alv~~~SG~~A~~~~l~al~~-------------~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 152 (416)
T PRK13034 92 ------ANVQPHSGSQANGAVYLALLK-------------PGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDRLT 152 (416)
T ss_pred ------eEEecCCcHHHHHHHHHHhcC-------------CCCEEEEcCccceeeeecCCcceeccceeeeEEccccccc
Confidence 134568999999999888754 23689999999976 2222221 12222 244454444
Q ss_pred cccCHHHHHHHhhh-CCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCC
Q 014163 188 YVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLP 266 (429)
Q Consensus 188 ~~~d~~~l~~~i~~-~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~ 266 (429)
+.+|++++++++.. ++++|++.. +..|...|+++|.++|++| |+++++|+||+.+... .+... ....
T Consensus 153 ~~~d~~~le~~l~~~~~klVi~~~--~~~g~~~dl~~l~~la~~~------g~~livD~Aha~G~~~--~g~~~--~~~~ 220 (416)
T PRK13034 153 GLIDYDEVEELAKEHKPKLIIAGF--SAYPRELDFARFREIADEV------GALLMVDMAHIAGLVA--AGEHP--NPFP 220 (416)
T ss_pred CCcCHHHHHHHHhhcCCeEEEECC--CccccccCHHHHHHHHHHc------CCEEEEeCcccccCcc--cCCCC--CCCC
Confidence 67999999999854 677765544 3357888999999999999 9999999999876542 11111 1224
Q ss_pred CeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHH
Q 014163 267 LVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMEN 346 (429)
Q Consensus 267 ~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~ 346 (429)
.+|++++++||++.+|.| |+++.+++. +...+ . .+.... +.++.......++..++...-..+..++.++
T Consensus 221 ~~Di~~~s~~K~l~g~~G-G~v~~~~~~-~~~~~--~-~~~~~~-----~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~ 290 (416)
T PRK13034 221 HAHVVTTTTHKTLRGPRG-GMILTNDEE-IAKKI--N-SAVFPG-----LQGGPLMHVIAAKAVAFGEALQPEFKTYAKQ 290 (416)
T ss_pred CceEEEEeCcccCCCCCC-eEEEECcHH-HHHHH--H-hhcCCc-----ccCCccHHHHHHHHHHHHHHhChhHHHHHHH
Confidence 699999999999988877 555554432 21111 1 111111 0112222233333333333222234566789
Q ss_pred HHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceeccc-CCCC---CCCceEEEE
Q 014163 347 CMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK-LPMS---YPWSTKLRV 422 (429)
Q Consensus 347 ~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~-~~~~---~~~~~~lRi 422 (429)
..+++++|++.|++.+ +++..+....+++.+.+... +.+...+.+.|. ++||.+... .|.. ......||+
T Consensus 291 l~~~a~~l~~~L~~~G-~~~~~~~~~t~i~~v~~~~~-~~~~~~~~~~L~----~~GI~v~~~~~p~~~~~p~~~~~lR~ 364 (416)
T PRK13034 291 VIANAQALAEVLKERG-YDLVSGGTDNHLLLVDLRPK-GLSGKDAEQALE----RAGITVNKNTVPGDTESPFVTSGIRI 364 (416)
T ss_pred HHHHHHHHHHHHHHcC-CEeccCCCCCcEEEEEcCCC-CCCHHHHHHHHH----hCCcEEeccCCCCCCcCCCCCCeeEe
Confidence 9999999999999984 88875312567776666432 345566667777 899998753 2211 011346999
Q ss_pred Eecc
Q 014163 423 ISHL 426 (429)
Q Consensus 423 ~~~~ 426 (429)
+++.
T Consensus 365 ~~~~ 368 (416)
T PRK13034 365 GTPA 368 (416)
T ss_pred CcHH
Confidence 8653
No 151
>PRK07908 hypothetical protein; Provisional
Probab=99.87 E-value=5.5e-20 Score=178.13 Aligned_cols=304 Identities=14% Similarity=0.043 Sum_probs=193.3
Q ss_pred CccccccccCC-ChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHH
Q 014163 57 RLNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (429)
Q Consensus 57 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~ 135 (429)
.++|....+++ +++.+.+++...+.. ...|....+..+++ +++++.+|++++ .+++|+|+++++.+++.
T Consensus 24 ~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr----~aia~~~~~~~~-----~I~it~Ga~~al~~~~~ 93 (349)
T PRK07908 24 LLDFAVNVRHDTPPEWLRERLAARLGD-LAAYPSTEDERRAR----AAVAARHGRTPD-----EVLLLAGAAEGFALLAR 93 (349)
T ss_pred eEEecCCCCCCCCCHHHHHHHHHHhhH-hhcCCCccchHHHH----HHHHHHhCcChh-----hEEECCCHHHHHHHHHh
Confidence 34455555544 445578887776643 22343333555544 556777787652 48999999999987766
Q ss_pred HHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCcc
Q 014163 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT 215 (429)
Q Consensus 136 a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~t 215 (429)
+ . .+.+++..+++..+...++..|++++.+|++++ +.+|++.+ +++++++++++++|||
T Consensus 94 -l-~--------------~~~viv~~P~y~~~~~~~~~~G~~i~~v~~~~~-~~~d~~~l----~~~~~~i~l~np~NPT 152 (349)
T PRK07908 94 -L-R--------------PRRAAVVHPSFTEPEAALRAAGIPVHRVVLDPP-FRLDPAAV----PDDADLVVIGNPTNPT 152 (349)
T ss_pred -c-C--------------CCeEEEeCCCChHHHHHHHHcCCEEEeeccCcc-cCcChhHh----ccCCCEEEEcCCCCCC
Confidence 2 2 135667788888888888999999999999865 78998854 4578899999999999
Q ss_pred ccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcccc-CCCCeeEEEE-cCcccC-CCCCCeEEEEEeC
Q 014163 216 GEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINV-SGHKYG-LVYAGVGWVVWRT 292 (429)
Q Consensus 216 G~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~d~~~~-s~hK~~-~~p~g~g~l~~~~ 292 (429)
|.+.+.++|.++|+ + +.++++|++|+.+.. . . ...+ ....-+++.+ |.+|.+ +++.++|+++.+
T Consensus 153 G~~~~~~~l~~l~~-~------~~~iIvDe~y~~~~~---~-~-~~~l~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~- 219 (349)
T PRK07908 153 SVLHPAEQLLALRR-P------GRILVVDEAFADAVP---G-E-PESLAGDDLPGVLVLRSLTKTWSLAGLRVGYALGA- 219 (349)
T ss_pred CCCcCHHHHHHHHh-c------CCEEEEECcchhhcc---C-C-ccccccccCCCEEEEeecccccCCccceeeeeecC-
Confidence 99999999999996 5 678999999986421 1 1 1111 1111133333 667754 588999999864
Q ss_pred CCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCC
Q 014163 293 KDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVG 372 (429)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 372 (429)
++.+ +.+...... + +.+.....++...++......+++..++..++++++.+.|+++ ++++..++ .
T Consensus 220 ~~~~-~~~~~~~~~-------~----~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~-~ 285 (349)
T PRK07908 220 PDVL-ARLTRGRAH-------W----PVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV-GARVVDPA-A 285 (349)
T ss_pred HHHH-HHHHhcCCC-------C----CccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC-CcEeccCC-C
Confidence 2222 222111110 0 1111111111111111122346677788889999999999988 48776544 5
Q ss_pred ceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 373 VPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 373 ~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
.+++.+++++ ..++.+.|. ++|+.+.+.......+..++|||++++
T Consensus 286 g~~~~~~~~~-----~~~~~~~l~----~~gI~v~~g~~f~~~~~~~vRis~~~~ 331 (349)
T PRK07908 286 APFVLVRVPD-----AELLRKRLR----ERGIAVRRGDTFPGLDPDYLRLAVRPR 331 (349)
T ss_pred ceEEEEECCc-----HHHHHHHHH----hCCEEEEECCCCCCCCCCeEEEEeCCC
Confidence 6666676542 345566665 899998765221112356899999764
No 152
>PRK05839 hypothetical protein; Provisional
Probab=99.87 E-value=1e-19 Score=177.67 Aligned_cols=327 Identities=12% Similarity=0.001 Sum_probs=202.5
Q ss_pred HHHHHhhccC-CCCCccccccccCCC-hHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCce
Q 014163 44 QVINDELMLD-GNPRLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGV 121 (429)
Q Consensus 44 ~~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~ 121 (429)
..+...+... +++.++|..+.|..+ ++.+.+++....+. ...|....+..++++.+.+++++.+|.+.+. ..++
T Consensus 12 ~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~a~~~~~~~-~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~---~~I~ 87 (374)
T PRK05839 12 RELLKEITPNKEYKGLDLTIGEPQFETPKFIQDALKNNAHL-LNKYPKSAGEESLREAQRGFFKRRFKIELKE---NELI 87 (374)
T ss_pred HHHHHHhhhcCCCCeEEcCCCCCCCCCCHHHHHHHHHHhhc-cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCc---ceEE
Confidence 3333333334 567777888777654 44577776655432 3335445577899999999999988864322 2488
Q ss_pred EeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccC-CccccCHHHHHHHhh
Q 014163 122 GTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVD 200 (429)
Q Consensus 122 ~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~ 200 (429)
+|+|+++++..++.++... ..++.|+++.++|..+...++..|++++.+|+++ +++.+|+++.+ +
T Consensus 88 it~G~~~al~~~~~~~~~~-----------~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~- 153 (374)
T PRK05839 88 PTFGTREVLFNFPQFVLFD-----------KQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--L- 153 (374)
T ss_pred EecCcHHHHHHHHHHHhcC-----------CCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--h-
Confidence 9999999998777765420 0236899999999999999999999999999973 34667765432 2
Q ss_pred hCCeEEEEeeCCCcccccc---ChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCc-ccc-------CCCCee
Q 014163 201 ENTICVAAILGSTLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDF-------RLPLVK 269 (429)
Q Consensus 201 ~~~~~v~~~~~~~~tG~~~---~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~-------~~~~~d 269 (429)
+++++|++++|+||||.+- .+++|+++|+++ |+++++|++|+.+.. ..+... ... ..+++-
T Consensus 154 ~~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~------~~~ii~DE~Y~~~~~--~~~~~s~~~~~~~~~~~~~~~vi 225 (374)
T PRK05839 154 QEVDLVILNSPNNPTGRTLSLEELIEWVKLALKH------DFILINDECYSEIYE--NTPPPSLLEASILVGNESFKNVL 225 (374)
T ss_pred ccccEEEEeCCCCCcCcccCHHHHHHHHHHHHHc------CCEEEeccchhhccc--CCCCCCHhhhhcccCccccCcEE
Confidence 4689999999999999984 467778889999 999999999987421 001000 000 112343
Q ss_pred EEEEcCcc-cCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHc-CHHHHHHHHHHH
Q 014163 270 SINVSGHK-YGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL-GFEGYKNIMENC 347 (429)
Q Consensus 270 ~~~~s~hK-~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l-~~~g~~~~~~~~ 347 (429)
+ ..|.-| |++++.++||++.. ++ +.+.+.....+... ++ ....+.++...+ ..+.+++..++.
T Consensus 226 ~-~~SfSK~~~~~GlRiG~ii~~-~~-~~~~~~~~~~~~~~--------~~----~~~~q~~~~~~l~~~~~~~~~~~~~ 290 (374)
T PRK05839 226 V-INSISKRSSAPGLRSGFIAGD-AS-ILKKYKAYRTYLGC--------AS----PLPLQKAAAVAWLDDEHAEFFRNIY 290 (374)
T ss_pred E-EeccccccCCccceeEEEecC-HH-HHHHHHHHHhhcCC--------CC----ChHHHHHHHHHhccchHHHHHHHHH
Confidence 3 345556 68899999998863 22 22222111111111 11 122233333333 234455666667
Q ss_pred HHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCC--CCceEEEEEec
Q 014163 348 MGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSY--PWSTKLRVISH 425 (429)
Q Consensus 348 ~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~--~~~~~lRi~~~ 425 (429)
.++++++.+.| + +. .+.....+.++++ +..++.++|.+ ++|+.+.+...... .+..++|+|++
T Consensus 291 ~~~~~~~~~~l---~-~~---~p~gg~fi~~~~~-----~~~~~~~~l~~---~~gi~v~pg~~f~~~~~~~~~iRis~~ 355 (374)
T PRK05839 291 AKNLKLAREIL---G-IT---IPPATFYVWLPVD-----NDEEFTKKLYQ---NEGIKVLPGSFLGRNGIGKGYVRIALV 355 (374)
T ss_pred HHHHHHHHHhc---C-CC---CCCeeEEEEEeCC-----ChHHHHHHHHH---HCCEEEeCchhhCCCCCCCCeEEEEec
Confidence 77777776655 2 22 2323444555543 23566666651 48999876511111 13578999986
Q ss_pred c
Q 014163 426 L 426 (429)
Q Consensus 426 ~ 426 (429)
.
T Consensus 356 ~ 356 (374)
T PRK05839 356 Y 356 (374)
T ss_pred C
Confidence 4
No 153
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.87 E-value=9.9e-21 Score=182.94 Aligned_cols=311 Identities=13% Similarity=0.009 Sum_probs=202.4
Q ss_pred cCCChHHHHHHHHHHcC----cCCCCCc---cChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeC-CchHHHHHHHHH
Q 014163 65 TTWMEPECDKLVMASIN----KNYVDMD---EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTV-GSSEAIMLAGLA 136 (429)
Q Consensus 65 ~~~~~~~~~~~~~~~~~----~~~~~~~---~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~-g~t~a~~~al~a 136 (429)
|...++.+.+++...+. ...+.+. .++.+.++-+++++.+++++|.+.+ ....++. +||.++-.++..
T Consensus 11 P~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~----~~v~~~~gsgt~~~Ea~~~n 86 (360)
T PRK05355 11 PAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDN----YKVLFLQGGASLQFAMVPMN 86 (360)
T ss_pred CCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCC----cEEEEEcCCchHHHHHHHHh
Confidence 33455678888776652 2222222 2345568888999999999998532 2255554 556666666665
Q ss_pred HHHHHHHHHHhcCCCCCCcEEEEcCCCc-hHHHHHHHhcCceeEEEeccCCccccCHHHHHH-HhhhCCeEEEEeeCCCc
Q 014163 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQ-VCWEKFARYFEVELKEVKLEEGYYVMNPVKAVE-LVDENTICVAAILGSTL 214 (429)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~~~~~h-~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~-~i~~~~~~v~~~~~~~~ 214 (429)
+..+ | +...++....+ .-+.+.++..|.. ..++.++..+..+..++++ ++++++++|.++|..|.
T Consensus 87 l~~~--------g----~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g~~~~~~~~~~~l~~~~~~V~~th~eTs 153 (360)
T PRK05355 87 LLGG--------G----KKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDGFTYIPPLDEWQLSDDAAYVHYTSNETI 153 (360)
T ss_pred cCCC--------C----CeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccCCCCCCChhhccCCCCCCEEEEccCCCc
Confidence 5431 1 12222222222 1357778888965 6676654224555555555 78888999999999999
Q ss_pred ccccc-ChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCC
Q 014163 215 TGEFE-DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (429)
Q Consensus 215 tG~~~-~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~ 293 (429)
||... |+++| + |++++||++++.+..++ ++ ...|++++++||+++ |.|.|+++++++
T Consensus 154 tGv~~~~i~~i------~------g~l~vVDavss~g~~~i-------dv--~~~d~~~~ssqK~lg-P~Glg~l~~s~~ 211 (360)
T PRK05355 154 DGTEFHELPDT------G------DVPLVADMSSDILSRPI-------DV--SKFGLIYAGAQKNIG-PAGLTIVIVRED 211 (360)
T ss_pred ceEecCccccc------C------CCcEEEEcCccccCccC-------CH--HHccEEEEecccccc-CCceEEEEECHH
Confidence 99997 77776 8 99999999998654422 22 235799999999875 999999999865
Q ss_pred CCccccccc-ccCCCCCC--CCCceeccCCchhHHHHHHHHHHHcCHH-HHHHHHHHHHHHHHHHHHHHHhCCCeEEeeC
Q 014163 294 DDLPDELVF-HINYLGSD--QPTFTLNFSKGSSQIIAQYYQFIRLGFE-GYKNIMENCMGNARALREGLEKTGRFEILSK 369 (429)
Q Consensus 294 ~~~~~~~~~-~~~~~~~~--~~~~~~~~tr~~~~~~~~~~al~~l~~~-g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 369 (429)
.+ .. +.. ...|.... .......+|++...++++.++++.+..+ |++++.++..+++++++++|++++.+..+.+
T Consensus 212 ~l-~~-~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~ 289 (360)
T PRK05355 212 LL-GR-ALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVA 289 (360)
T ss_pred HH-hh-cccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCC
Confidence 32 11 111 11111100 0111234899989999999999999888 8999999999999999999999983333332
Q ss_pred C-CCc-eEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEecc
Q 014163 370 D-VGV-PLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHL 426 (429)
Q Consensus 370 ~-~~~-~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~ 426 (429)
+ .+. .+++|++++ .....++...+. ++|+.+..... ....+|+|+..
T Consensus 290 ~~~rs~~v~sf~~~~--~~~~~~~~~~~~----~~Gi~~~~~~~----~~g~vRiS~~~ 338 (360)
T PRK05355 290 PEDRSRMNVPFTLAD--EELDKKFLAEAK----AAGLVGLKGHR----SVGGMRASIYN 338 (360)
T ss_pred hhhcCCcEEEEEcCC--hHHHHHHHHHHH----HCCCcccCCCC----ccCcEEEECCC
Confidence 2 134 678999754 222234434444 89999743221 12469999854
No 154
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.87 E-value=4.3e-20 Score=184.71 Aligned_cols=325 Identities=13% Similarity=0.072 Sum_probs=204.8
Q ss_pred ccccccccCCChHHHHHHHHHHcC------------cCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCC
Q 014163 58 LNLASFVTTWMEPECDKLVMASIN------------KNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVG 125 (429)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g 125 (429)
++|+......+.+.+.+.+....+ .....|....+..+|++++.+++.+.+|.+.... ...+++|+|
T Consensus 41 i~L~~~En~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~-~~~Iiit~G 119 (468)
T PLN02450 41 IQMGLAENQLSFDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFD-PNKLVLTAG 119 (468)
T ss_pred EEeehhHhHhhHHHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcC-hHHeEEccC
Confidence 556665554444455565544322 0112244455778899999999988777432100 123889999
Q ss_pred chHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHH-hcCceeEEEecc-CCccccCHHHHHHHhhh--
Q 014163 126 SSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFAR-YFEVELKEVKLE-EGYYVMNPVKAVELVDE-- 201 (429)
Q Consensus 126 ~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~-~~G~~v~~v~~~-~~~~~~d~~~l~~~i~~-- 201 (429)
+++++.+.+.++++ .++.|+++.++|..+...+. ..|++++.||++ ++++.+|++++++++++
T Consensus 120 a~~al~~l~~~l~~-------------pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~ 186 (468)
T PLN02450 120 ATSANETLMFCLAE-------------PGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQ 186 (468)
T ss_pred hHHHHHHHHHHhCC-------------CCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHH
Confidence 99999988888765 23689999999999887777 589999999986 34578999999998865
Q ss_pred ----CCeEEEEeeCCCccccccC---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCc--ccc---------
Q 014163 202 ----NTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE--WDF--------- 263 (429)
Q Consensus 202 ----~~~~v~~~~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~--------- 263 (429)
++++|++++|+||||.+-+ +++|.++|+++ ++++++|++|+.+.. ...... ...
T Consensus 187 ~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~------~~~iI~DE~Y~~~~f--~~~~~~s~l~~~~~~~~~~~ 258 (468)
T PLN02450 187 KLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAK------NIHLISDEIYSGTVF--DSPGFVSVMEVLKDRKLENT 258 (468)
T ss_pred hcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHC------CcEEEEEcccccccc--CCCCcccHHHHhhhcccccC
Confidence 6789999999999999854 66788889999 999999999986321 111110 000
Q ss_pred -CCCCeeEEEEcCcc-cCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCH----
Q 014163 264 -RLPLVKSINVSGHK-YGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF---- 337 (429)
Q Consensus 264 -~~~~~d~~~~s~hK-~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~---- 337 (429)
..+++-++. +.-| +++++.++|+++..++. +...+.....+ +. ...+.+.++...+..
T Consensus 259 ~~~~~vi~l~-S~SK~~~l~GlRiG~li~~~~~-l~~~~~~~~~~-----------~~---~s~~~Q~a~~~~L~~~~~~ 322 (468)
T PLN02450 259 DVSNRVHIVY-SLSKDLGLPGFRVGAIYSNDEM-VVSAATKMSSF-----------GL---VSSQTQYLLSALLSDKKFT 322 (468)
T ss_pred CCCCcEEEEE-eccccCCCCCccEEEEEECCHH-HHHHHHHHhhc-----------CC---CCHHHHHHHHHHhCCchhH
Confidence 012344444 4455 55699999999875432 21221111111 01 122345555555533
Q ss_pred -HHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEE-EEEecCC-CC---CCHHHHHHHHHHHHhccCceecccCC
Q 014163 338 -EGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLV-AFSLKDS-SA---HTVFEISEGLRKKLNRFQVVYPQKLP 411 (429)
Q Consensus 338 -~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v-~f~~~~~-~~---~~~~~~~~~L~~~l~~~G~~~~~~~~ 411 (429)
..+++..++..+.++.+.+.|++++ +.+.. + ..+++ .++++.. .. ....++.+.|. .+.|+.+.+...
T Consensus 323 ~~~l~~~~~~l~~rr~~l~~~L~~~g-i~~~~-~-~~g~flwi~l~~~~~~~~~~~~~~l~~~ll---~~~gV~v~PG~~ 396 (468)
T PLN02450 323 KNYLEENQKRLKQRQKKLVSGLEAAG-IKCLK-S-NAGLFCWVDMRHLLKSNTFEAEMELWKKIV---YEVKLNISPGSS 396 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcC-CcccC-C-CceEEEEEEchHhcCcCCchHHHHHHHHHH---HhCCEEEeCccc
Confidence 2356677888889999999999885 76543 3 45544 4454321 00 01122333333 267999876522
Q ss_pred CCCCCceEEEEEecc
Q 014163 412 MSYPWSTKLRVISHL 426 (429)
Q Consensus 412 ~~~~~~~~lRi~~~~ 426 (429)
....+.+++|+|++.
T Consensus 397 f~~~~~g~~Rl~f~~ 411 (468)
T PLN02450 397 CHCTEPGWFRVCFAN 411 (468)
T ss_pred cCCCCCCEEEEEecC
Confidence 222345689999985
No 155
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.87 E-value=2.6e-20 Score=179.18 Aligned_cols=305 Identities=15% Similarity=0.059 Sum_probs=201.8
Q ss_pred HHHHHHHHHHcCc----CCCCCcc---ChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCC-chHHHHHHHHHHHHHH
Q 014163 70 PECDKLVMASINK----NYVDMDE---YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVG-SSEAIMLAGLAFKRKW 141 (429)
Q Consensus 70 ~~~~~~~~~~~~~----~~~~~~~---~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g-~t~a~~~al~a~~~~~ 141 (429)
..+.+++..++.+ ..+.+.. ++.+.++-+++++.+++++|.+.+ ...++++| ||+|+..++..+..+
T Consensus 5 ~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~----~~v~~~~gsgT~a~ea~~~nl~~~- 79 (349)
T TIGR01364 5 EEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNIPDN----YEVLFLQGGATGQFAAVPLNLLAE- 79 (349)
T ss_pred HHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCCCCC----ceEEEEcCCchHHHHHHHHhcCCC-
Confidence 3456666655542 2222322 345558888999999999998542 23777766 999999888876531
Q ss_pred HHHHHhcCCCCCCcEEEEcCCCch--HHHHHHHhcCceeEEEeccCC---ccccCHHHHHHHhhhCCeEEEEeeCCCccc
Q 014163 142 QQKRKEQGKPYDKPNIVTGANVQV--CWEKFARYFEVELKEVKLEEG---YYVMNPVKAVELVDENTICVAAILGSTLTG 216 (429)
Q Consensus 142 ~~~~~~~g~~~~~~~vi~~~~~h~--s~~~~~~~~G~~v~~v~~~~~---~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG 216 (429)
+..+++-..+.+ -+...|+..|+ +..+..++. .-.+|+++++ +++++++|.++|..|.||
T Consensus 80 ------------~~~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~th~ETstG 144 (349)
T TIGR01364 80 ------------GKVADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--ISEDAAYVHYCANETIHG 144 (349)
T ss_pred ------------CCeEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcC--CCCCCCEEEEcCCCCccc
Confidence 123332222222 36778888999 887776421 1246666655 346789999999999999
Q ss_pred cccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCc
Q 014163 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDL 296 (429)
Q Consensus 217 ~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~ 296 (429)
...| ++++.+ +++++||++++.+..++ ++ ...|++.+++||+++ |.|.|+++++++.+
T Consensus 145 v~~~-----~l~~~~------~~l~iVDavss~g~~~i-------d~--~~~d~~~~ssqK~lg-P~Glg~l~~s~~~~- 202 (349)
T TIGR01364 145 VEFR-----ELPDVK------NAPLVADMSSNILSRPI-------DV--SKFGLIYAGAQKNIG-PAGLTVVIVRKDLL- 202 (349)
T ss_pred Eecc-----eecccC------CCeEEEEccccccCccC-------CH--HHccEEEEecccccC-CCceEEEEECHHHH-
Confidence 9876 677788 99999999998654422 22 236799999999875 99999999976422
Q ss_pred ccccccccCCCCCC--CCCceeccCCchhHHHHHHHHHHHcCHH-HHHHHHHHHHHHHHHHHHHHHhCCCeEEeeC-C-C
Q 014163 297 PDELVFHINYLGSD--QPTFTLNFSKGSSQIIAQYYQFIRLGFE-GYKNIMENCMGNARALREGLEKTGRFEILSK-D-V 371 (429)
Q Consensus 297 ~~~~~~~~~~~~~~--~~~~~~~~tr~~~~~~~~~~al~~l~~~-g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~-~ 371 (429)
...-.....|.... .......||++...++++.++++.+..+ |++++.++..++++++++.|++++++..... + .
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~ 282 (349)
T TIGR01364 203 GRASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRN 282 (349)
T ss_pred hhcccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHH
Confidence 11101111111100 0011223799988999999999999888 7999999999999999999999977655532 1 1
Q ss_pred Cc-eEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEecc
Q 014163 372 GV-PLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHL 426 (429)
Q Consensus 372 ~~-~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~ 426 (429)
+. .+++|.+++. .+...+.+.+.++|+++..... . ...+|+|+..
T Consensus 283 rs~~v~sf~~~~~------~~~~~~~~~~~~~Gi~~~~~~~--~--~g~vRvS~~~ 328 (349)
T TIGR01364 283 RSRMNVVFTLGNE------ELEKRFLKEAEERGLVSLKGHR--S--VGGMRASIYN 328 (349)
T ss_pred cCCeEEEEecCCh------hHhHHHHHHHHHCCCcccCCcc--c--cCeeEEECcC
Confidence 34 5788987542 1122333344489996544322 1 2469999753
No 156
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.87 E-value=6.5e-20 Score=179.02 Aligned_cols=309 Identities=16% Similarity=0.060 Sum_probs=202.9
Q ss_pred ccccccccC-CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHH
Q 014163 58 LNLASFVTT-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (429)
Q Consensus 58 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a 136 (429)
++|..+.+. .+++.+.+++.+.... ...|....+ . ++++++++++|++.+ .+++|+|+++++.+++.+
T Consensus 39 i~l~~~~~~~~~~~~~~~al~~~~~~-~~~Y~~~~g-~----~lr~~ia~~~~~~~~-----~i~~t~G~~~~l~~~~~~ 107 (371)
T PRK05166 39 AKLGSNENPLGPSPAVRRAFADIAEL-LRLYPDPQG-R----ALREAIAARTGVPAD-----RIILGNGSEDLIAVICRA 107 (371)
T ss_pred EEcCCCCCCCCCCHHHHHHHHHHHHH-hhcCCCCcH-H----HHHHHHHHHhCcCHH-----HEEEcCCHHHHHHHHHHH
Confidence 445555444 3456677777654332 223332223 2 355567888888652 388999999999888777
Q ss_pred HHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccc
Q 014163 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (429)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG 216 (429)
+.+ .++.|+++.++|..+...++..|++++.++++++ +.+|++++++++++++++|++++++||||
T Consensus 108 ~~~-------------~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~l~~~~~~~~~~v~l~~p~NPtG 173 (371)
T PRK05166 108 VLR-------------PGDRVVTLYPSFPLHEDYPTMMGARVERVTVTPD-LGFDLDALCAAVARAPRMLMFSNPSNPVG 173 (371)
T ss_pred hcC-------------CCCEEEEcCCChHHHHHHHHHcCCeEEEeecCCC-CCCCHHHHHHhhhcCCCEEEEeCCCCCCC
Confidence 643 2368999999999999999999999999999765 78999999999998999999999999999
Q ss_pred cccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc--c-c-CC-CCeeEEEEcCcccC-CCCCCeEEEEE
Q 014163 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW--D-F-RL-PLVKSINVSGHKYG-LVYAGVGWVVW 290 (429)
Q Consensus 217 ~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~--~-~-~~-~~~d~~~~s~hK~~-~~p~g~g~l~~ 290 (429)
.+.+.+++.++++...+ ++++++|++|+.+.. ...... . + .. .++ ++..|.-|.+ +++.++||+++
T Consensus 174 ~~~~~~~~~~l~~~~~~----~~~ii~De~y~~~~~---~~~~~~~~~~~~~~~~~v-i~i~SfSK~~~l~GlRiG~~i~ 245 (371)
T PRK05166 174 SWLTADQLARVLDATPP----ETLIVVDEAYAEYAA---GDDYPSALTLLKARGLPW-IVLRTFSKAYGLAGLRVGYGLV 245 (371)
T ss_pred CCCCHHHHHHHHHhCCC----CcEEEEECcHHHhcC---CcCcccHHHHHhhcCCCE-EEEeechHhhhcchhheeeeec
Confidence 99998888888876411 789999999986431 111110 0 1 11 122 3444556655 58999999876
Q ss_pred eCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeC
Q 014163 291 RTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-FEGYKNIMENCMGNARALREGLEKTGRFEILSK 369 (429)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~-~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 369 (429)
.+++.. +.+..... .+ + ...+.+.+++..+. .+.+++..+...+.++++.+.|++.+ +.+. +
T Consensus 246 ~~~~l~-~~~~~~~~-------~~----~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~-p 308 (371)
T PRK05166 246 SDPELV-GLLDRVRT-------PF----N---VNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAEMG-YRIA-P 308 (371)
T ss_pred CCHHHH-HHHHHhcc-------CC----C---CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCc-CeeC-C
Confidence 544322 22111110 00 1 12233444444443 44567777888889999999999885 7643 3
Q ss_pred CCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 370 DVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 370 ~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
+ ..+.+.++.. .+..++.+.|. ++|+.+...... ....++|++++.+
T Consensus 309 ~-~g~fl~~~~~----~~~~~l~~~l~----~~gi~v~p~~~~--~~~~~iRi~~~~~ 355 (371)
T PRK05166 309 S-RANFLFFDAR----RPASAVAEALL----RQGVIVKPWKQP--GFETFIRVSIGSP 355 (371)
T ss_pred C-cCCEEEEeCC----CCHHHHHHHHH----HCCeEEecCCCC--CCCCeEEEEcCCH
Confidence 3 4445444432 24566777777 889988765221 2356799999864
No 157
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.87 E-value=1e-19 Score=178.23 Aligned_cols=328 Identities=14% Similarity=0.093 Sum_probs=204.0
Q ss_pred CCCCCcccccccc--CCCh----HHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCc
Q 014163 53 DGNPRLNLASFVT--TWME----PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGS 126 (429)
Q Consensus 53 ~~~~~~~~~~~~~--~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~ 126 (429)
.|...|.|.+..+ +..+ ..+.+.+.+++..+-..|..+++..+||++ +++++|.+. ++.|+||
T Consensus 9 ~g~n~~~l~~~~v~iDlltds~t~ams~~~~~a~~~gd~~Y~~~~g~~~Leea----ia~~~g~~~-------vv~t~~G 77 (431)
T cd00617 9 AGYNVFLLRSEDVYIDLLTDSGTGAMSDYQWAAMMLGDEAYAGSKSFYDLEDA----VQDLFGFKH-------IIPTHQG 77 (431)
T ss_pred cCCCEEeCCCCCcCCCCCCCCCcHHHHHHHHHHHHhCCCccCCCCCHHHHHHH----HHHHHCCCe-------EEEcCCH
Confidence 3444444555544 2222 355666556655444457888899988877 677778864 8999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCC---------ccccCHHHHHH
Q 014163 127 SEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG---------YYVMNPVKAVE 197 (429)
Q Consensus 127 t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~---------~~~~d~~~l~~ 197 (429)
++|+.+++.++.. + +++| ++.+.+.++...+...|+.++.+++++. .+.+|+++|++
T Consensus 78 t~Al~la~~al~~--------p-----GD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~ 143 (431)
T cd00617 78 RGAENILFSILLK--------P-----GRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEK 143 (431)
T ss_pred HHHHHHHHHHhCC--------C-----CCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHH
Confidence 9999999888754 1 2455 5776677788888999999999999732 24599999999
Q ss_pred HhhhC----CeEEEEeeCCCcc-cccc---ChHHHHHHHHHhhhccCCCccEEeecccccccccccC---CCC-cccc--
Q 014163 198 LVDEN----TICVAAILGSTLT-GEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY---PDL-EWDF-- 263 (429)
Q Consensus 198 ~i~~~----~~~v~~~~~~~~t-G~~~---~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~---~~~-~~~~-- 263 (429)
+|+++ +++|+++.++|++ |.+- ++++|+++|++| |++||.|+|+...-+-+.. +.. ...+
T Consensus 144 ~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~------gi~li~DaAr~~~na~~i~~r~~g~~~~si~e 217 (431)
T cd00617 144 LIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKY------GIPVVLDAARFAENAYFIKEREEGYRDKSIAE 217 (431)
T ss_pred HhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHc------CCEEEEEchhhHhhhhhhhcccccccCCCHHH
Confidence 99876 6889999999998 7774 567889999999 9999999997532111110 000 0011
Q ss_pred ----CCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHH
Q 014163 264 ----RLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEG 339 (429)
Q Consensus 264 ----~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g 339 (429)
-....|++++++||-++++.| |+++.++++.. ..+.... .......++ |..+.....++..+|.....
T Consensus 218 i~~e~~s~sd~~~mS~~K~~~~~~G-G~i~~~d~~l~-~~~~~~~-~~~~~~~~~---gG~~~r~~~A~A~gL~e~~~-- 289 (431)
T cd00617 218 IAREMFSYADGCTMSAKKDGLVNIG-GFLALRDDELY-EEARQRV-VLYEGFVTY---GGMAGRDMEALAQGLREAVE-- 289 (431)
T ss_pred HHHHhhccCCEEEEEeecCCCCccc-eEEEeCcHHHH-HHHHHhc-cccCCcccc---ccccHHHHHHHHHHHHhccc--
Confidence 123689999999998877764 67776654333 2222111 000011111 22222223333224432111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecC--C----CCCCHHHHHHHHHHHHhccCceeccc-C--
Q 014163 340 YKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKD--S----SAHTVFEISEGLRKKLNRFQVVYPQK-L-- 410 (429)
Q Consensus 340 ~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~--~----~~~~~~~~~~~L~~~l~~~G~~~~~~-~-- 410 (429)
.+.+++..+.+++|.+.|.+.+ +.++.|. ..+.+.+.+.. + ...+..+++..|.+ +.|+.+.-. .
T Consensus 290 -~~~l~~~~~~r~~l~~~L~~~G-~~v~~P~-Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~---e~gV~~~~~g~~~ 363 (431)
T cd00617 290 -EDYLRHRVEQVRYLGDRLDEAG-VPIVEPA-GGHAVFIDAREFLPHIPQEQFPAQALAAELYL---EAGVRAVELGIFS 363 (431)
T ss_pred -HHHHHHHHHHHHHHHHHHHHCC-CCccCCC-cceEEEEEhHHhcCCCCcccCcHHHHHHHHHH---HcCeeEEeeccee
Confidence 2445555667799999999986 8777553 45555555542 1 12356777766663 666664321 1
Q ss_pred -C--CCC-----CCceEEEEEec
Q 014163 411 -P--MSY-----PWSTKLRVISH 425 (429)
Q Consensus 411 -~--~~~-----~~~~~lRi~~~ 425 (429)
+ ++. .....+|+++-
T Consensus 364 ~~~~~~~~~~~~~~~~~~rl~~p 386 (431)
T cd00617 364 AGRDPNTGENKYPELELVRLAIP 386 (431)
T ss_pred cccCCCCCcccCCccceeEEecc
Confidence 1 111 12478999886
No 158
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.86 E-value=1e-19 Score=178.72 Aligned_cols=317 Identities=15% Similarity=0.093 Sum_probs=203.6
Q ss_pred CCCCCccccccc-cCC-ChHHHHHHHHHHcCcC---CCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCch
Q 014163 53 DGNPRLNLASFV-TTW-MEPECDKLVMASINKN---YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS 127 (429)
Q Consensus 53 ~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t 127 (429)
+++..++|.+.. +++ ++|.+.+++...+.+. ...+....+..++.+++.+++++++|.+. .++.++|+
T Consensus 31 ~g~~~id~~~~~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~~~-------~i~~~sG~ 103 (385)
T TIGR01825 31 NGKEVINLSSNNYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKTEA-------ALVFQSGF 103 (385)
T ss_pred CCceEEEeeccCccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCCCc-------EEEECcHH
Confidence 456666666554 444 5677888777776543 22344455778888999999999999753 34444558
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhh----CC
Q 014163 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE----NT 203 (429)
Q Consensus 128 ~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~----~~ 203 (429)
+++..++.++.. .+++|+++.+.|.++...+...|+++..++ .+|++++++.+.+ ++
T Consensus 104 ~a~~~a~~~~~~-------------~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~------~~d~~~l~~~l~~~~~~~~ 164 (385)
T TIGR01825 104 NTNQGVLSALLR-------------KGDIVLSDELNHASIIDGLRLTKATKKIYK------HADMDDLDRVLRENPSYGK 164 (385)
T ss_pred HHHHHHHHHhCC-------------CCCEEEEEccccHHHHHHHHhcCCceEEeC------CCCHHHHHHHHHhhccCCC
Confidence 888877776643 235889999999999888888888776553 3788888887764 57
Q ss_pred eEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCC-C-CccccCCCCeeEEEEcCcccCCC
Q 014163 204 ICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYP-D-LEWDFRLPLVKSINVSGHKYGLV 281 (429)
Q Consensus 204 ~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~-~-~~~~~~~~~~d~~~~s~hK~~~~ 281 (429)
++|++....|++|.+.|+++|.++|++| |+++++|++|+.+....... . ....+. .+.|++..+.+|+++.
T Consensus 165 ~~v~~~~v~~~tG~~~~~~~i~~l~~~~------~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~ 237 (385)
T TIGR01825 165 KLIVTDGVFSMDGDVAPLPEIVELAERY------GAVTYVDDAHGSGVMGEAGRGTVHHFGLE-DKVDIQVGTLSKAIGV 237 (385)
T ss_pred eEEEEecCCcCCCCccCHHHHHHHHHHh------CCEEEEECcccccCcCCCCCccHhhcCCC-cCCcEEEEeccHHhhc
Confidence 8888888899999999999999999999 99999999997543211000 0 001122 3578888999998854
Q ss_pred CCCeEEEEEeCCCCcccccccc-cCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHh
Q 014163 282 YAGVGWVVWRTKDDLPDELVFH-INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEK 360 (429)
Q Consensus 282 p~g~g~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~ 360 (429)
.| |+++.+ ++.. +.+... ..|..+ ++.+.....++.++++.+... .+..++..++++++.+.|++
T Consensus 238 -~g-G~~~~~-~~~~-~~~~~~~~~~~~~--------~~~~~~~~~a~~~al~~~~~~--~~~~~~~~~~~~~l~~~L~~ 303 (385)
T TIGR01825 238 -VG-GYAAGH-KELI-EYLKNRARPFLFS--------TAQPPAVVAALAAAVDELQRS--PELMERLWDNTRFFKAGLGK 303 (385)
T ss_pred -CC-CEEecC-HHHH-HHHHHhCcccccc--------CCCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHH
Confidence 33 676543 2222 222111 111111 112222334455555544221 34667777889999999998
Q ss_pred CCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceeccc-CCCCCCCceEEEEEec
Q 014163 361 TGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK-LPMSYPWSTKLRVISH 425 (429)
Q Consensus 361 ~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~-~~~~~~~~~~lRi~~~ 425 (429)
++ +++..+ ..+++.+.+.. ..+..++.+.|. ++|+.++.. ++....+...+|++.+
T Consensus 304 ~g-~~~~~~--~~~~~~~~~~~--~~~~~~~~~~L~----~~gi~v~~~~~~~~~~~~~~iRi~~~ 360 (385)
T TIGR01825 304 LG-YDTGGS--ETPITPVVIGD--EKAAQEFSRRLF----DEGIFAQSIVFPTVPRGTARIRNIPT 360 (385)
T ss_pred cC-CCCCCC--CCCEEEEEECC--HHHHHHHHHHHH----HCCcEEcccCCCCCCCCCceEEEEEc
Confidence 75 776543 34566665432 123456666666 789987643 3322235567999874
No 159
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=7.1e-20 Score=178.64 Aligned_cols=310 Identities=13% Similarity=0.014 Sum_probs=206.3
Q ss_pred ccccccCC-ChHHHHHHHHHHcCc---CCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHH
Q 014163 60 LASFVTTW-MEPECDKLVMASINK---NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (429)
Q Consensus 60 ~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~ 135 (429)
|....+++ ++|.+.+++.+.+.. ....| ..++...+++.+.+++.+.+|.+.+. ..+.+|+|+++++.+++.
T Consensus 31 l~~~~~~~~~~~~~~~al~~~l~~~~~~~~~Y-~~~g~~~lr~aia~~~~~~~~~~~~~---~~I~it~G~~~~l~~~~~ 106 (368)
T PRK03317 31 LNTNENPYPPSPALVADIAEAVAEAAAGLNRY-PDRDAVALRADLAAYLTAQTGVGLTV---ENVWAANGSNEILQQLLQ 106 (368)
T ss_pred ecCCCCCCCCCHHHHHHHHHHHhhhhhhhccC-CCCchHHHHHHHHHHhhhhccCCCCh---hhEEECCCHHHHHHHHHH
Confidence 44444443 456688888776543 22234 23567888888888888877765432 248899999999999988
Q ss_pred HHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhh-CCeEEEEeeCCCc
Q 014163 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTL 214 (429)
Q Consensus 136 a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~ 214 (429)
++.+ .++.|+++.++|..+..+++..|+++..++.+++ +.+|++++++++.. ++++|+++.|+||
T Consensus 107 ~~~~-------------~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~-~~~d~~~l~~~~~~~~~~~i~l~~p~NP 172 (368)
T PRK03317 107 AFGG-------------PGRTALGFVPSYSMHPIIARGTHTEWVEGPRAAD-FTLDVDAAVAAIAEHRPDVVFLTSPNNP 172 (368)
T ss_pred HhcC-------------CCCEEEEeCCChHHHHHHHHhcCCeeEEcccCCC-CCCCHHHHHHHHhccCCCEEEEeCCCCC
Confidence 8765 2368999999999999999999998888876654 78999999999874 6788999999999
Q ss_pred cccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcccc-CCCCeeEEEEcCcccC-CCCCCeEEEEEeC
Q 014163 215 TGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYG-LVYAGVGWVVWRT 292 (429)
Q Consensus 215 tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~d~~~~s~hK~~-~~p~g~g~l~~~~ 292 (429)
||.+.+.+++.++++.+ ++++++|++|+.+.. ......... ....-..+..+..|.+ +++.++|+++..
T Consensus 173 tG~~~~~~~l~~l~~~~------~~~lI~DE~y~~~~~--~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~- 243 (368)
T PRK03317 173 TGTALPLDDVEAILDAA------PGIVVVDEAYAEFRR--SGTPSALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAA- 243 (368)
T ss_pred CCCCCCHHHHHHHHHHC------CceEEEeCCchhhcc--cCCcCHHHHHHhCCCEEEEEechhhhccchhhhhhhhCC-
Confidence 99999999999999999 999999999987421 110000111 1111123344667765 478899998763
Q ss_pred CCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC
Q 014163 293 KDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-FEGYKNIMENCMGNARALREGLEKTGRFEILSKDV 371 (429)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~-~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 371 (429)
++.. ..+.... ..+ + ...+.+.++...+. .+.+.+..++..+.++++.+.|++.+ +.+.. +
T Consensus 244 ~~~~-~~l~~~~-------~~~----~---~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~~~~~-~- 305 (368)
T PRK03317 244 PAVV-DALRLVR-------LPY----H---LSAVTQAAARAALRHADELLASVAALRAERDRVVAWLRELG-LRVAP-S- 305 (368)
T ss_pred HHHH-HHHHhcC-------CCC----C---CCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCC-CEeCC-C-
Confidence 2222 2221110 011 1 11223333333332 23455666777788889999999875 76553 3
Q ss_pred CceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 372 GVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 372 ~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
..+++.|... .+..++.+.|. ++|+.+..+. ...++|++++..
T Consensus 306 ~~~~~~~~~~----~~~~~~~~~l~----~~Gv~v~~~~-----~~~~iRi~~~~~ 348 (368)
T PRK03317 306 DANFVLFGRF----ADRHAVWQGLL----DRGVLIRDVG-----IPGWLRVTIGTP 348 (368)
T ss_pred CCcEEEEecc----CCHHHHHHHHH----HCCEEEEeCC-----CCCeEEEecCCH
Confidence 4566655321 13456666676 8999987531 134699998754
No 160
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.86 E-value=1.1e-19 Score=178.09 Aligned_cols=293 Identities=13% Similarity=0.046 Sum_probs=188.9
Q ss_pred HHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcC
Q 014163 70 PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQG 149 (429)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g 149 (429)
+...+++.+.+..+.. ..++...++|++ +++++|.+. .+++++||+|+.+++.++.-+
T Consensus 10 ~~~~~~v~~~~~~~~~--~~g~~~~~le~~----la~~~g~~~-------~v~~~sgt~al~~~l~al~~~--------- 67 (380)
T TIGR03588 10 QDDIDAVVEVLKSDFL--TQGPTVPAFEEA----LAEYVGAKY-------AVAFNSATSALHIACLALGVG--------- 67 (380)
T ss_pred HHHHHHHHHHHhcCCc--cCChhHHHHHHH----HHHHHCCCe-------EEEEcCHHHHHHHHHHHcCCC---------
Confidence 3345566666655432 335555666554 788888864 567778999999888876211
Q ss_pred CCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhh----hCCeEEEEeeCCCccccccChHHHH
Q 014163 150 KPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD----ENTICVAAILGSTLTGEFEDVKLLH 225 (429)
Q Consensus 150 ~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~----~~~~~v~~~~~~~~tG~~~~l~~I~ 225 (429)
.+++|+++.++|.++..++...|++++.++++++++.+|+++++++++ ++|++|++++ ++|...|+++|.
T Consensus 68 ---~Gd~Viv~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~~~---~~G~~~~~~~i~ 141 (380)
T TIGR03588 68 ---PGDRVWTTPITFVATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVPVD---FAGKSVDMQAIA 141 (380)
T ss_pred ---CCCEEEeCCcchHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEEeC---CCCccCCHHHHH
Confidence 236899999999999999999999999999976558899999999998 6788877544 579999999999
Q ss_pred HHHHHhhhccCCCccEEeecccccccccccCCCCccccCC-CCeeEEEEcCc--ccCCCCCCeEEEEEeCCCCccccccc
Q 014163 226 DLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRL-PLVKSINVSGH--KYGLVYAGVGWVVWRTKDDLPDELVF 302 (429)
Q Consensus 226 ~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~-~~~d~~~~s~h--K~~~~p~g~g~l~~~~~~~~~~~~~~ 302 (429)
++|+++ |+++++|++|+.+.. +.. . ..+. ...|..++|.| |++.++.| |++++.+++.. +.+..
T Consensus 142 ~l~~~~------~~~lI~D~a~a~g~~--~~~-~--~~g~~~~~d~~~~S~~~~K~~~~~~G-G~v~~~~~~~~-~~~~~ 208 (380)
T TIGR03588 142 ALAKKH------GLKIIEDASHALGAE--YGG-K--PVGNCRYADATVFSFHPVKIITTAEG-GAVTTNDEELA-ERMRL 208 (380)
T ss_pred HHHHHc------CCEEEEECCCcccCc--cCC-E--eCCCccccceEEEecCCCCcccccCc-eEEEECCHHHH-HHHHH
Confidence 999999 999999999986532 111 1 1111 13588888887 88876644 55565544322 21111
Q ss_pred ccC--CCCCCC---------CCce--eccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeC
Q 014163 303 HIN--YLGSDQ---------PTFT--LNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSK 369 (429)
Q Consensus 303 ~~~--~~~~~~---------~~~~--~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 369 (429)
... ...... ..+. ..|.......+....++.. .+.++++.++.+++++++.+.|++++++.+..+
T Consensus 209 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~q--L~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~ 286 (380)
T TIGR03588 209 LRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQ--LKKLDRFVAKRREIAARYDRLLKDLPYFTPLTI 286 (380)
T ss_pred HHHCCCCCCcccccccccCcceeeeeccccccCccHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCCccCCCC
Confidence 000 000000 0000 0011100111111122222 244788889999999999999999987765543
Q ss_pred CC----CceEEEEEecCCCCCCHHHHHHHHHHHHhccCceeccc
Q 014163 370 DV----GVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK 409 (429)
Q Consensus 370 ~~----~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~ 409 (429)
+. ....+.+.+....+.+.+++.+.|. ++||.++.+
T Consensus 287 ~~~~~~~~~~~~i~~~~~~~~~r~~l~~~L~----~~gI~~~~~ 326 (380)
T TIGR03588 287 PLGSKSAWHLYPILLDQEFGCTRKEVFEALR----AAGIGVQVH 326 (380)
T ss_pred CCCCEeEEEEEEEEECCcCCCCHHHHHHHHH----HCCCCcccC
Confidence 21 1234444443212356778888887 899988755
No 161
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.86 E-value=3.1e-19 Score=173.31 Aligned_cols=326 Identities=13% Similarity=0.019 Sum_probs=205.6
Q ss_pred HHHHHHHHHHhhccCCCCCccccccccCCC-hHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCC-CCCCC
Q 014163 39 KEAAYQVINDELMLDGNPRLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTP-VADDK 116 (429)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~-~~~~~ 116 (429)
...+++...+.. .+++..++|..+.|..+ ++.+.+++.+.... ..|....+..++++++.+++.+.+|.+ .+.
T Consensus 6 ~~~~~~~~~~~~-~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~--~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~-- 80 (357)
T TIGR03539 6 WDSLAPYKAKAA-SHPDGIVDLSVGTPVDPVPPLIRAALAAAADA--PGYPQTWGTPELREAIVDWLERRRGVPGLDP-- 80 (357)
T ss_pred HHHHHHHHHHhh-hCCCCeEEccCCCCCCCCCHHHHHHHHHHHhh--CCCCcccCCHHHHHHHHHHHHHhcCCCCCCc--
Confidence 344555544442 34555577777777554 45577776654432 234455678899999999999887765 322
Q ss_pred CCCceEeCCchHHHHHHHHHH-HHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHH
Q 014163 117 TAVGVGTVGSSEAIMLAGLAF-KRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKA 195 (429)
Q Consensus 117 ~~~~~~t~g~t~a~~~al~a~-~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l 195 (429)
..+++|+|+++++..++.++ .. .+++|++++++|..+...++..|++++.++ |++.+
T Consensus 81 -~~I~it~G~~~~i~~~~~~l~~~-------------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~--------~~~~l 138 (357)
T TIGR03539 81 -TAVLPVIGTKELVAWLPTLLGLG-------------PGDTVVIPELAYPTYEVGALLAGATPVAAD--------DPTEL 138 (357)
T ss_pred -CeEEEccChHHHHHHHHHHHcCC-------------CCCEEEECCCCcHHHHHHHHhcCCEEeccC--------Chhhc
Confidence 24889999999998877665 22 236899999999999998999999877664 12222
Q ss_pred HHHhhhCCeEEEEeeCCCccccccC---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCc-ccc-----CCC
Q 014163 196 VELVDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDF-----RLP 266 (429)
Q Consensus 196 ~~~i~~~~~~v~~~~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~-----~~~ 266 (429)
. .+++++|++++++||||.+-+ +++|+++|+++ ++++++|++|+.+.. ...... .+. ...
T Consensus 139 ~---~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~~~ 207 (357)
T TIGR03539 139 D---PVGPDLIWLNSPGNPTGRVLSVDELRAIVAWARER------GAVVASDECYLELGW--EGRPVSILDPRVCGGDHT 207 (357)
T ss_pred C---ccCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHc------CeEEEEecchhhhcc--CCCCccceecccCCCccc
Confidence 2 247899999999999999854 67899999999 999999999975321 111000 000 011
Q ss_pred CeeEEEEcCccc-CCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC-HHHHHHHH
Q 014163 267 LVKSINVSGHKY-GLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-FEGYKNIM 344 (429)
Q Consensus 267 ~~d~~~~s~hK~-~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~-~~g~~~~~ 344 (429)
+ ..+..|..|. +++++++||++.. ++.. ..+........ .+ ...+.+.++...+. ...+++..
T Consensus 208 ~-vi~~~S~SK~~~~~G~R~G~~i~~-~~~~-~~~~~~~~~~~---------~~---~~~~~q~~~~~~l~~~~~~~~~~ 272 (357)
T TIGR03539 208 G-LLAVHSLSKRSNLAGYRAGFVAGD-PALV-AELLTVRKHAG---------LM---VPAPVQAAMVAALGDDGHVAEQK 272 (357)
T ss_pred c-EEEEeccccccCCCceeEEEEecC-HHHH-HHHHHHHhhcc---------cC---CCHHHHHHHHHHcCCHHHHHHHH
Confidence 2 2445566775 4788899998753 2222 22111111110 11 12223444444453 34456667
Q ss_pred HHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEe
Q 014163 345 ENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVIS 424 (429)
Q Consensus 345 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~ 424 (429)
++..++++++.+.|++.+ +.+.. + ..+++.|...+ .+..++.+.|. ++|+.+.+.......+..++|+++
T Consensus 273 ~~~~~~~~~~~~~L~~~g-~~~~~-p-~~~~~~~~~~~---~~~~~~~~~l~----~~gV~v~pg~~f~~~~~~~iRis~ 342 (357)
T TIGR03539 273 ARYAARRAQLKPALEKAG-FRIDH-S-EAGLYLWATRG---EDAWDTVDRLA----ELGILVAPGDFYGPAGSQHVRVAL 342 (357)
T ss_pred HHHHHHHHHHHHHHHHcC-CCCcC-C-CccEEEEEECC---CCHHHHHHHHH----hCCEEECCccccCCCCCCeEEEEe
Confidence 777888999999998875 66543 3 45666555432 24456666666 899998765211223456899999
Q ss_pred ccc
Q 014163 425 HLR 427 (429)
Q Consensus 425 ~~~ 427 (429)
+++
T Consensus 343 ~~~ 345 (357)
T TIGR03539 343 TAT 345 (357)
T ss_pred cCC
Confidence 763
No 162
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.86 E-value=6e-20 Score=176.48 Aligned_cols=268 Identities=11% Similarity=0.010 Sum_probs=176.5
Q ss_pred HHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCcee
Q 014163 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVEL 178 (429)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v 178 (429)
++++.+++++|.+.. .+++|+|+++++.+++.. ... ..|++.+++|..+..+++..|+++
T Consensus 44 ~lr~~ia~~~~~~~~-----~I~it~Gs~~~l~~~~~~-~~~--------------~~vv~~~P~y~~y~~~~~~~G~~v 103 (332)
T PRK06425 44 DIEDQIKIYTQGLKI-----KVLIGPGLTHFIYRLLSY-INV--------------GNIIIVEPNFNEYKGYAFTHGIRI 103 (332)
T ss_pred HHHHHHHHHhCCCcc-----eEEECCCHHHHHHHHHHH-hCC--------------CcEEEeCCChHHHHHHHHHcCCeE
Confidence 455668899999763 488999999999887753 221 257777999999999999999999
Q ss_pred EEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccC---hHHHHHHHHHhhhccCCCccEEeeccccccccccc
Q 014163 179 KEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (429)
Q Consensus 179 ~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (429)
+.+|+++ ..+|.+.+++ .++++|++++|+||||.+-+ +++|+++|+++ ++++++|++|+.+.. .
T Consensus 104 ~~vp~~~--~~~~~~~l~~---~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~------~~~iI~DE~Y~~~~~--~ 170 (332)
T PRK06425 104 SALPFNL--INNNPEILNN---YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKK------GALLFIDEAFIDFVP--N 170 (332)
T ss_pred EEEeCCc--ccCcHHHHhh---cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHc------CCEEEEecchhcccc--c
Confidence 9999875 3467666653 37889999999999999855 67777888999 999999999987531 1
Q ss_pred CCCCcccc--CCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHH
Q 014163 256 YPDLEWDF--RLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFI 333 (429)
Q Consensus 256 ~~~~~~~~--~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~ 333 (429)
........ ..+++-.+...++-+++++.++||++..+ + +.+.+.... ..+. - ... ++ .++.
T Consensus 171 ~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~-~-li~~l~~~~-------~~~~----~--~~~-~~-~~l~ 233 (332)
T PRK06425 171 RAEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDD-Y-NMKISRKIT-------EPWS----V--CDP-AI-DFIR 233 (332)
T ss_pred cchhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCH-H-HHHHHHHcC-------CCCc----c--CHH-HH-HHHH
Confidence 10000011 11234444434444555999999988642 2 222221110 0111 0 111 11 1122
Q ss_pred HcCHHH-HHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCC
Q 014163 334 RLGFEG-YKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPM 412 (429)
Q Consensus 334 ~l~~~g-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~ 412 (429)
....+. +++..+...+.++++.+.|++.+ ++++.++ ..+++.++++ +..++.+.|. ++|+.+++....
T Consensus 234 ~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~~~-~g~f~~~~~~-----~~~~~~~~l~----~~gi~v~~~~~f 302 (332)
T PRK06425 234 SIDLDYVAKHSLDIMENERSYLINNLEAMG-FRAAGDP-SANFITFMIP-----DAHDFYSYLL----KNGILVRLLDDY 302 (332)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHCC-CEECCCC-CceEEEEEcC-----CHHHHHHHHH----HCCeEEEECCCC
Confidence 222222 35667788889999999999985 7765444 5667777653 3467777777 899998876222
Q ss_pred CCCCceEEEEEeccc
Q 014163 413 SYPWSTKLRVISHLR 427 (429)
Q Consensus 413 ~~~~~~~lRi~~~~~ 427 (429)
...+..++|++++.+
T Consensus 303 ~~~~~~~iRis~~~~ 317 (332)
T PRK06425 303 ECLGEQYIRIAIRRR 317 (332)
T ss_pred CCCCCCEEEEEeCCH
Confidence 223356899999864
No 163
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=3.9e-20 Score=179.45 Aligned_cols=270 Identities=17% Similarity=0.090 Sum_probs=184.8
Q ss_pred HHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCcee
Q 014163 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVEL 178 (429)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v 178 (429)
++++.+++++|++++ .+.+|+|+++++.+++.++..+ ++++|+++.++|..+...++..|+++
T Consensus 64 ~Lr~aia~~~~~~~~-----~I~it~Gs~~~i~~~~~~~~~~------------g~d~vlv~~P~y~~y~~~~~~~g~~v 126 (354)
T PRK04635 64 ELINAYSAYAGVAPE-----QILTSRGADEAIELLIRAFCEP------------GQDSIACFGPTYGMYAISAETFNVGV 126 (354)
T ss_pred HHHHHHHHHhCcCHH-----HEEEeCCHHHHHHHHHHHhcCC------------CCCeEEEcCCChHHHHHHHHHcCCEE
Confidence 344557788898763 4899999999999988877541 12579999999999999999999999
Q ss_pred EEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCC
Q 014163 179 KEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD 258 (429)
Q Consensus 179 ~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~ 258 (429)
+.+|++++ +.+|++.+++ + +++++|++++|+||||.+.+.+++.++++... ++++++|++|..+.. ..
T Consensus 127 ~~v~~~~~-~~~~~~~l~~-~-~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~-----~~~vivDeay~~~~~----~~ 194 (354)
T PRK04635 127 KALPLTAD-YQLPLDYIEQ-L-DGAKLVFICNPNNPTGTVIDRADIEQLIEMTP-----DAIVVVDEAYIEFCP----EY 194 (354)
T ss_pred EEEecCCC-CCCCHHHHHh-c-cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCC-----CcEEEEeCchHhhcc----Cc
Confidence 99999764 7899999873 4 68899999999999999999999999998752 699999999976431 11
Q ss_pred Ccccc--CCCCeeEEEEcCcccC-CCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHc
Q 014163 259 LEWDF--RLPLVKSINVSGHKYG-LVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL 335 (429)
Q Consensus 259 ~~~~~--~~~~~d~~~~s~hK~~-~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l 335 (429)
...++ ..+++ .+..+.+|++ +++.++|+++.++ +.. +.+..... .+ +. ....+.+++..+
T Consensus 195 s~~~~~~~~~~~-iv~~S~SK~~~l~GlRlG~~i~~~-~~~-~~l~~~~~-------~~----~~---~~~~~~~a~~~l 257 (354)
T PRK04635 195 SVADLLASYPNL-VVLRTLSKAFALAGARCGFTLANE-ELI-EILMRVIA-------PY----PV---PLPVSEIATQAL 257 (354)
T ss_pred chHHHHhhCCCE-EEEechHHHhhhhHHHHhhhhCCH-HHH-HHHHhhcC-------CC----CC---CHHHHHHHHHHH
Confidence 10111 11233 3455778876 4788899987643 222 22111000 01 11 112233444444
Q ss_pred C---HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCC
Q 014163 336 G---FEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPM 412 (429)
Q Consensus 336 ~---~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~ 412 (429)
. .+.+++..++..+.++++.+.|++++++++. ++ ..+++.++++ +..++.+.|. ++|+.++.+...
T Consensus 258 ~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~-~g~f~~~~~~-----~~~~~~~~l~----~~gv~v~~~~~~ 326 (354)
T PRK04635 258 SEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVL-EG-NGNYVLAKFD-----DVDAVFKALW----DAGIVARAYKDP 326 (354)
T ss_pred hcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEC-CC-CCcEEEEECC-----CHHHHHHHHH----HCCEEEEECCCC
Confidence 2 2345666677788889999999998767665 33 4556655553 2456666666 899998765221
Q ss_pred CCCCceEEEEEeccc
Q 014163 413 SYPWSTKLRVISHLR 427 (429)
Q Consensus 413 ~~~~~~~lRi~~~~~ 427 (429)
....++|||++++
T Consensus 327 --~~~~~lRis~~~~ 339 (354)
T PRK04635 327 --RLANCIRFSFSNR 339 (354)
T ss_pred --CCCCeEEEEeCCH
Confidence 2345799999764
No 164
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.86 E-value=1.3e-19 Score=182.05 Aligned_cols=294 Identities=12% Similarity=0.029 Sum_probs=191.2
Q ss_pred CccChhhHHHHHHHHHHHHHhhC--CCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCc
Q 014163 87 MDEYPVTTELQNRCVNMIAHLFN--TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQ 164 (429)
Q Consensus 87 ~~~~~~~~~le~~~~~~la~l~g--~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h 164 (429)
|....+..++++++.+++.+.+| ++.+. ..+++|+|+++|+.+++.++.+ .++.|+++.++|
T Consensus 90 y~~~~G~~~LR~aiA~~l~~~~g~~v~v~p---e~Ivit~Ga~~al~~l~~~l~~-------------pGD~Vlv~~P~Y 153 (496)
T PLN02376 90 FQDYHGLKKFRQAIAHFMGKARGGKVTFDP---ERVVMSGGATGANETIMFCLAD-------------PGDVFLIPSPYY 153 (496)
T ss_pred cCCCCCcHHHHHHHHHHHHHHhCCCCcCCh---hhEEEccchHHHHHHHHHHhCC-------------CCCEEEECCCCc
Confidence 45566889999999999999888 22221 2489999999999999988865 236899999999
Q ss_pred hHHHHHHH-hcCceeEEEeccC-CccccCHHHHHHHhh------hCCeEEEEeeCCCccccccC---hHHHHHHHHHhhh
Q 014163 165 VCWEKFAR-YFEVELKEVKLEE-GYYVMNPVKAVELVD------ENTICVAAILGSTLTGEFED---VKLLHDLLTKKNE 233 (429)
Q Consensus 165 ~s~~~~~~-~~G~~v~~v~~~~-~~~~~d~~~l~~~i~------~~~~~v~~~~~~~~tG~~~~---l~~I~~la~~~~~ 233 (429)
..+...+. ..|++++.||++. +++.+|++++++++. .++++|++++|+||||.+-+ +++|+++|+++
T Consensus 154 ~~~~~~~~~~~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~-- 231 (496)
T PLN02376 154 AAFDRDLRWRTGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRK-- 231 (496)
T ss_pred cchHHHHHhhCCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHc--
Confidence 99988777 4899999999963 347899999987643 35788999999999999955 66788899999
Q ss_pred ccCCCccEEeecccccccccccCCCCcccc-CC----C------CeeEEEEcCcccC-CCCCCeEEEEEeCCCCcccccc
Q 014163 234 ETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RL----P------LVKSINVSGHKYG-LVYAGVGWVVWRTKDDLPDELV 301 (429)
Q Consensus 234 ~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~----~------~~d~~~~s~hK~~-~~p~g~g~l~~~~~~~~~~~~~ 301 (429)
++++++|++|+.+.. ..+... .+ .+ + ..-.+..+..|.+ +++.++|+++..++. +.....
T Consensus 232 ----~i~lI~DEiY~~~~f--~~~~~~-si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~-l~~~~~ 303 (496)
T PLN02376 232 ----NIHLVVDEIYAATVF--AGGDFV-SVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDS-VVSCAR 303 (496)
T ss_pred ----CCEEEEEcCcccccc--CCCCcc-cHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHH-HHHHHH
Confidence 999999999987431 111110 10 00 0 1123345778865 688999999875432 212111
Q ss_pred cccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHH-----HHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEE
Q 014163 302 FHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEG-----YKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLV 376 (429)
Q Consensus 302 ~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g-----~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v 376 (429)
....+ +. ...+.+.++...+.... +++..++..++++.+.+.|++.+ +.++.+ ..+++
T Consensus 304 ~~~~~-----------~~---vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~g-i~~~~~--~aG~f 366 (496)
T PLN02376 304 KMSSF-----------GL---VSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKAD-IACLTS--NAGLF 366 (496)
T ss_pred HHhhc-----------CC---CCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CcccCC--CceEE
Confidence 11110 11 12334555555554322 23335666778888889998864 665543 34444
Q ss_pred EE-EecCC-CC---C-CHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEecc
Q 014163 377 AF-SLKDS-SA---H-TVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHL 426 (429)
Q Consensus 377 ~f-~~~~~-~~---~-~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~ 426 (429)
+| +++.. .. . +..++.+.|. .+.|+.+.+.........+++|||+++
T Consensus 367 lwi~l~~~~~~~~~~~~e~~l~~~ll---~~~gV~v~pGs~F~~~~~g~~Ri~fa~ 419 (496)
T PLN02376 367 AWMDLRHLLRDRNSFESEIELWHIII---DKVKLNVSPGSSFRCTEPGWFRICFAN 419 (496)
T ss_pred EEEEchhhhccCCchhHHHHHHHHHH---HcCCEEEeCccccCCCCCCEEEEEeeC
Confidence 44 44321 00 0 1234555554 145999887622222345689999975
No 165
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.86 E-value=8.4e-19 Score=163.15 Aligned_cols=347 Identities=14% Similarity=0.070 Sum_probs=240.0
Q ss_pred CCCCCHHHHHHHHHHhhccCC---CCCccccccccCCChHHHHHHH---HHHcCcCCCCC-ccChhhHHHHHHHHHHHHH
Q 014163 34 DNSMPKEAAYQVINDELMLDG---NPRLNLASFVTTWMEPECDKLV---MASINKNYVDM-DEYPVTTELQNRCVNMIAH 106 (429)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~le~~~~~~la~ 106 (429)
....|+.++++++...-+++- +.-+.|++ |+--..|.+.+.. ..+.+-.++.+ +..++..++-.++.+||++
T Consensus 42 ~Pe~SE~e~~Rh~~rLs~kn~avd~~m~PLGS-CTMK~Np~~e~~~~~~p~f~~iHP~~pe~~vqG~l~li~~Lq~~L~~ 120 (496)
T COG1003 42 LPEHSETEMVRHYTRLSQKDLAVDRGMIPLGS-CTMKLNPKAEMKPATWPEFANIHPFQPEEQVQGYLELIYELQEWLKE 120 (496)
T ss_pred CccccHHHHHHHHHHHHhcccccccCccCCcc-cccccCchhhcccccccchhhcCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 344678889999887665431 11133322 4333334333222 12233333333 2346889999999999999
Q ss_pred hhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCC
Q 014163 107 LFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEG 186 (429)
Q Consensus 107 l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~ 186 (429)
+.|++. ...-.+.|+++-+.++++.+.....+ |. ..+.+|++|+.+|......|.+.|.+|+.|+++++
T Consensus 121 ITG~Da------vsLQP~AGAqGE~aGll~Ir~YHe~r----G~-~~R~~~LIP~SAHGTNPASAam~G~~VV~V~~~~~ 189 (496)
T COG1003 121 ITGMDA------VSLQPNAGAQGEYAGLLAIRAYHESR----GE-GHRNICLIPDSAHGTNPASAAMAGFKVVVVKCDEN 189 (496)
T ss_pred hcCCce------eeccCCCCcchhhHHHHHHHHHHHHc----CC-CcCcEEEeeccccCCChhhHhhcCceEEEEecCCC
Confidence 999985 23344577888888888887755432 21 14568999999999998889999999999999986
Q ss_pred ccccCHHHHHHHhhhCCeEEEEeeCCCccccc-cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCC
Q 014163 187 YYVMNPVKAVELVDENTICVAAILGSTLTGEF-EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRL 265 (429)
Q Consensus 187 ~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~-~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~ 265 (429)
|.+|+++|++++.+++.++.+|+|||- |.+ .++.+|+++.+++ |..|..|||---.+.....| +.
T Consensus 190 -G~VDlddLk~k~~~~~AalMiTnPsT~-GvFE~~I~ei~~ivH~~------Gg~vY~DGANlNA~vG~~rP------Gd 255 (496)
T COG1003 190 -GNVDLDDLRAKAEDNLAALMITNPSTL-GVFEEDIREICEIVHEA------GGQVYYDGANLNAIVGLARP------GD 255 (496)
T ss_pred -CCccHHHHHHHhccceeEEEeccCccc-ccchhhHHHHHHHHHHc------CCEEEecCcchhhhhccccc------cc
Confidence 899999999999999999999999887 776 6899999999999 99999999986543322221 23
Q ss_pred CCeeEEEEcCcccCCCC-----CCeEEEEEeCCCCcccccccc------cCCCCCCCCC------ceeccCCchhHHHHH
Q 014163 266 PLVKSINVSGHKYGLVY-----AGVGWVVWRTKDDLPDELVFH------INYLGSDQPT------FTLNFSKGSSQIIAQ 328 (429)
Q Consensus 266 ~~~d~~~~s~hK~~~~p-----~g~g~l~~~~~~~~~~~~~~~------~~~~~~~~~~------~~~~~tr~~~~~~~~ 328 (429)
.++|++-++.||+++.| +|+|-+.++. .+...+... ..|....... ..+-|+. ......
T Consensus 256 ~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~--~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~--~il~~a 331 (496)
T COG1003 256 MGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKA--HLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSA--SILPIA 331 (496)
T ss_pred cccceEEeecccccccCCCCCCCCCCceehHh--hccccCCCCcccCCCccccccCCCCccceeeccccCcc--hHHHHH
Confidence 47999999999987665 4566677653 232222111 1111111000 0112333 345678
Q ss_pred HHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC--CceEEEEEecC---CCCCCHHHHHHHHHHHHhccC
Q 014163 329 YYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV--GVPLVAFSLKD---SSAHTVFEISEGLRKKLNRFQ 403 (429)
Q Consensus 329 ~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--~~~~v~f~~~~---~~~~~~~~~~~~L~~~l~~~G 403 (429)
|+.+..+|.+|+++.-+...-+++|+.++|+.. +++...+. ..+.+.+..++ ..+++..+++++|. +.|
T Consensus 332 ~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~--y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrLl----D~G 405 (496)
T COG1003 332 WAYIRMMGADGLKQASEVAVLNANYIARRLKGY--YPVPYTGENRVAHECILDARPLKKETGVRALDVAKRLL----DYG 405 (496)
T ss_pred HHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhc--CccccCCCCcceeEEEeechHhHhhcCCcHHHHHHHHH----hcC
Confidence 999999999999999999999999999999873 56654432 34555665542 23689999999999 999
Q ss_pred ceeccc-CCCCCCC
Q 014163 404 VVYPQK-LPMSYPW 416 (429)
Q Consensus 404 ~~~~~~-~~~~~~~ 416 (429)
+...+. +|....+
T Consensus 406 fHaPT~~FPliV~~ 419 (496)
T COG1003 406 FHAPTMYFPLIVAG 419 (496)
T ss_pred CCCCcccCcccccc
Confidence 987766 6644443
No 166
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.86 E-value=5.1e-20 Score=178.34 Aligned_cols=308 Identities=13% Similarity=0.026 Sum_probs=203.3
Q ss_pred ChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeC-CchHHHHHHHHHHHHHHHHHHH
Q 014163 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTV-GSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~-g~t~a~~~al~a~~~~~~~~~~ 146 (429)
.+|.+.+++......-..-...++...++.+++++.+++++|++.+ ..+++++ ++|.++..++..+...
T Consensus 14 ~~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~~~~~~----~~v~f~~gs~T~a~~~~~~~l~~~------ 83 (361)
T TIGR01366 14 VRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELFSLPDG----YEVILGNGGATAFWDAATFGLIEK------ 83 (361)
T ss_pred CCHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHhCCCCC----ceEEEECCchhHHHHHHHHhcccc------
Confidence 4566666654221000000124566778888999999999999642 2377764 5999999888776421
Q ss_pred hcCCCCCCcEEEEcCCCchH-HHHHHHhc--CceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHH
Q 014163 147 EQGKPYDKPNIVTGANVQVC-WEKFARYF--EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKL 223 (429)
Q Consensus 147 ~~g~~~~~~~vi~~~~~h~s-~~~~~~~~--G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~ 223 (429)
..++++...|.+ +.+.+... +.+++.++++++ ..++. .+.+++++|+++|.+|.||.+.|+++
T Consensus 84 --------~~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~lV~~~h~et~tG~~~pi~~ 149 (361)
T TIGR01366 84 --------KSLHLSFGEFSSKFAKAVKLAPWLGEPIIVTADPG-SAPEP-----QADPGVDVIAWAHNETSTGVAVPVRR 149 (361)
T ss_pred --------cccEEecCHHHHHHHHHHHhhhccCCceEEecCCC-CCCCC-----ccCCCCCEEEEcccCCccceeccccc
Confidence 234455555543 55555542 237788887653 34443 35678999999999999999999999
Q ss_pred HHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCccccccc-
Q 014163 224 LHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVF- 302 (429)
Q Consensus 224 I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~- 302 (429)
| +|++ |++++||++++.+.. +.++. .+|++.+++||++++|.|.++++++++. +.+....
T Consensus 150 I---~~~~------g~~~iVDavqs~g~~-------~idv~--~~D~~~~s~~K~lg~~~Gl~~~~~s~~~-~~~~~~~~ 210 (361)
T TIGR01366 150 P---EGSD------DALVVIDATSGAGGL-------PVDIA--ETDVYYFAPQKNFASDGGLWLAIMSPAA-LERIEAIA 210 (361)
T ss_pred c---cccC------CCeEEEEcCccccCC-------CCCHH--HCCEEEEEchhhcCCCCceEEEEECHHH-Hhhhhccc
Confidence 8 5888 999999999986543 22332 3899999999999998888887776532 1111000
Q ss_pred -c----cCCCCC-----CCCCceeccCCchhHHHHHHHHHHHcCHH-HHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC
Q 014163 303 -H----INYLGS-----DQPTFTLNFSKGSSQIIAQYYQFIRLGFE-GYKNIMENCMGNARALREGLEKTGRFEILSKDV 371 (429)
Q Consensus 303 -~----~~~~~~-----~~~~~~~~~tr~~~~~~~~~~al~~l~~~-g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 371 (429)
. +.|... ........+|++...++++..+++.+..+ |++.+.++..++++++++.|.+.+.++++....
T Consensus 211 ~~~~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~ 290 (361)
T TIGR01366 211 ASGRWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDP 290 (361)
T ss_pred CCCCCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCCh
Confidence 0 011100 00001223677767777889999988777 699999999999999999999998666664321
Q ss_pred --Cc-eEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEecc
Q 014163 372 --GV-PLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHL 426 (429)
Q Consensus 372 --~~-~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~ 426 (429)
.. .+.++.+. .+++..++.+.|. ++||.+.... ... +...+||+.+.
T Consensus 291 ~~~s~~v~~v~~~--~g~~~~~v~~~L~----~~gI~i~~~~-~~l-~~~~vRis~~~ 340 (361)
T TIGR01366 291 GKRSQVVGTIDFV--DDIDAATVAKILR----ANGIVDTEPY-RKL-GRNQLRVAMFP 340 (361)
T ss_pred hhcccceEEEECC--CccCHHHHHHHHH----HCCCeeccCc-ccc-CCCcEEEEcCC
Confidence 12 23445553 3678889999998 8899875321 122 23569999864
No 167
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.86 E-value=4.9e-19 Score=172.50 Aligned_cols=324 Identities=13% Similarity=0.014 Sum_probs=202.7
Q ss_pred HHHHHHHhhccCCCCCccccccccCCC-hHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCC-CCCCCCCC
Q 014163 42 AYQVINDELMLDGNPRLNLASFVTTWM-EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTP-VADDKTAV 119 (429)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~-~~~~~~~~ 119 (429)
.+..+.......+++.++|..+.|..+ ++.+.+++....+. ..|....+..++++.+.+++.+.+|.+ .+. ..
T Consensus 14 ~~~~~~~~~~~~~~~~i~l~~~~p~~~~~~~~~~~~~~~~~~--~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~---~~ 88 (364)
T PRK07865 14 TLAPAKATAAAHPDGIVDLSVGTPVDPVPPVIQEALAAAADA--PGYPTTAGTPELREAIVGWLARRRGVTGLDP---AA 88 (364)
T ss_pred HHHHHHHHHHhcCCCEEEcCCCCCCCCCCHHHHHHHHHHHhh--CCCCCccCCHHHHHHHHHHHHHHcCCCCCCc---cc
Confidence 344443333334455566777776544 45677777655432 245555678899999999999888865 322 24
Q ss_pred ceEeCCchHHHHHHHHHH-HHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHH
Q 014163 120 GVGTVGSSEAIMLAGLAF-KRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVEL 198 (429)
Q Consensus 120 ~~~t~g~t~a~~~al~a~-~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~ 198 (429)
+.+|+|+++++.+++.++ .. .++.|++++++|..+..+++..|+++..++. +++++
T Consensus 89 I~it~G~~~~i~~~~~~l~~~-------------~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~--------~~~l~-- 145 (364)
T PRK07865 89 VLPVIGSKELVAWLPTLLGLG-------------PGDVVVIPELAYPTYEVGARLAGATVVRADS--------LTELG-- 145 (364)
T ss_pred EEEccChHHHHHHHHHHHcCC-------------CCCEEEECCCCcccHHHHHHhcCCEEEecCC--------hhhCC--
Confidence 899999999998766655 22 2368999999999999999999998877742 22222
Q ss_pred hhhCCeEEEEeeCCCcccccc---ChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCc-cc--c-C-CCCeeE
Q 014163 199 VDENTICVAAILGSTLTGEFE---DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WD--F-R-LPLVKS 270 (429)
Q Consensus 199 i~~~~~~v~~~~~~~~tG~~~---~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~--~-~-~~~~d~ 270 (429)
..++++|++++++||||.+- .+++|.++|+++ ++++++|++|+.+.. ..+... .. . + ...-..
T Consensus 146 -~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~------~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~~~~~i 216 (364)
T PRK07865 146 -PQRPALIWLNSPSNPTGRVLGVDHLRKVVAWARER------GAVVASDECYLELGW--DAEPVSILDPRVCGGDHTGLL 216 (364)
T ss_pred -cccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHc------CCEEEEecchhhhcc--CCCCCccccccccCCccceEE
Confidence 25678999999999999884 467888999999 999999999986431 111000 00 0 0 001235
Q ss_pred EEEcCcccC-CCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC-HHHHHHHHHHHH
Q 014163 271 INVSGHKYG-LVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-FEGYKNIMENCM 348 (429)
Q Consensus 271 ~~~s~hK~~-~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~-~~g~~~~~~~~~ 348 (429)
++.|..|.+ +++.++||++.. ++.. ..+......... + .....+.++...+. .+.+++..+...
T Consensus 217 ~~~S~SK~~~~~GlRiG~i~~~-~~~~-~~~~~~~~~~~~---------~---~~~~~q~~~~~~l~~~~~~~~~~~~~~ 282 (364)
T PRK07865 217 AVHSLSKQSNLAGYRAGFVAGD-PALV-AELLEVRKHAGM---------M---VPAPVQAAMVAALGDDAHVREQRERYA 282 (364)
T ss_pred EEeechhccCCCceeeEEEecC-HHHH-HHHHHHHHhcCC---------C---cCHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 555677765 788899998753 3222 222111111100 1 11223444444443 344566777788
Q ss_pred HHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEecc
Q 014163 349 GNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHL 426 (429)
Q Consensus 349 ~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~ 426 (429)
++++.+.+.|++.+ +.+..+ ..+++.|.-.+ .+..++.+.|. ++|+.+.+.......+..++|++++.
T Consensus 283 ~~~~~l~~~L~~~g-~~~~~~--~~~~~~~~~~~---~~~~~~~~~l~----~~gv~v~pg~~f~~~~~~~iRi~~~~ 350 (364)
T PRK07865 283 RRRAVLRPALEAAG-FRVDHS--EAGLYLWATRG---EDCWDTVAWLA----ERGILVAPGDFYGPAGAQHVRVALTA 350 (364)
T ss_pred HHHHHHHHHHHHcC-CcccCC--CccEEEEEeCC---CCHHHHHHHHH----HCCEEEeCccccCcCCCCEEEEEecC
Confidence 89999999999875 665433 34544433211 24456666666 89999876521122235679999964
No 168
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.85 E-value=1.2e-19 Score=174.36 Aligned_cols=263 Identities=16% Similarity=0.028 Sum_probs=178.3
Q ss_pred HHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCcee
Q 014163 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVEL 178 (429)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v 178 (429)
++++++++++|.+++ ...+|+|+++++..+..++ . .+ .|+++.++|..+...++..|+++
T Consensus 51 ~lr~~la~~~~~~~~-----~i~~t~G~~~~i~~~~~~l-~-------------~g-~vl~~~p~y~~~~~~~~~~g~~~ 110 (330)
T TIGR01140 51 ELRAAAAAYYGLPAA-----SVLPVNGAQEAIYLLPRLL-A-------------PG-RVLVLAPTYSEYARAWRAAGHEV 110 (330)
T ss_pred HHHHHHHHHhCCChh-----hEEECCCHHHHHHHHHHHh-C-------------CC-eEEEeCCCcHHHHHHHHHcCCEE
Confidence 555668888887642 3889999999988754432 2 12 68889999999999999999998
Q ss_pred EEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccC---hHHHHHHHHHhhhccCCCccEEeeccccccccccc
Q 014163 179 KEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (429)
Q Consensus 179 ~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (429)
+.++ |++.+++++ +++++|++++|+||||.+.+ +++|+++|+++ |+++++|++|..+..
T Consensus 111 ~~~~--------d~~~l~~~~-~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~------~~~ii~De~y~~~~~--- 172 (330)
T TIGR01140 111 VELP--------DLDRLPAAL-EELDVLVLCNPNNPTGRLIPPETLLALAARLRAR------GGWLVVDEAFIDFTP--- 172 (330)
T ss_pred EEeC--------CHHHHHhhc-ccCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhc------CCEEEEECcccccCC---
Confidence 8876 788899888 45778999999999999977 67778888999 999999999986532
Q ss_pred CCCCcccc-CCCCeeEEEEcCcccCC-CCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHH
Q 014163 256 YPDLEWDF-RLPLVKSINVSGHKYGL-VYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFI 333 (429)
Q Consensus 256 ~~~~~~~~-~~~~~d~~~~s~hK~~~-~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~ 333 (429)
.... ..+ ....-+.+..+.+|+++ ++.++||++.+++ .. ..+.. +.. .+ + ....++.++..
T Consensus 173 ~~~~-~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~-~~-~~l~~---~~~----~~----~---~s~~~q~~~~~ 235 (330)
T TIGR01140 173 DASL-APQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHPA-LL-ARLRE---ALG----PW----T---VNGPARAAGRA 235 (330)
T ss_pred ccch-hhHhccCCCEEEEEecchhhcCchhhhhheeCCHH-HH-HHHHh---cCC----CC----C---chHHHHHHHHH
Confidence 1111 011 11234677778999875 6678899887542 22 22211 110 11 1 12334555555
Q ss_pred HcCHHH-HHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCC
Q 014163 334 RLGFEG-YKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPM 412 (429)
Q Consensus 334 ~l~~~g-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~ 412 (429)
.+.... .+...++..++++++.+.|++++.+++. ++ ...++.+.++ +..++.++|. ++|+.+.+....
T Consensus 236 ~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~-~~~f~~~~~~-----~~~~l~~~l~----~~gi~v~pg~~f 304 (330)
T TIGR01140 236 ALADTAWQAATRARLAAERARLAALLARLGGLEVV-GG-TALFLLVRTP-----DAAALHEALA----RRGILIRDFDNF 304 (330)
T ss_pred HHhchHHHHHHHHHHHHHHHHHHHHHHhCCCceEC-CC-CCeEEEEEcC-----CHHHHHHHHH----HCCEEEEECCCC
Confidence 554433 3666788889999999999998765543 22 3344444432 2456777777 899998876222
Q ss_pred CCCCceEEEEEeccc
Q 014163 413 SYPWSTKLRVISHLR 427 (429)
Q Consensus 413 ~~~~~~~lRi~~~~~ 427 (429)
...+..++|++++++
T Consensus 305 ~~~~~~~iRi~~~~~ 319 (330)
T TIGR01140 305 PGLDPRYLRFALPTD 319 (330)
T ss_pred CCCCCCEEEEEecCH
Confidence 122345799999764
No 169
>PRK03321 putative aminotransferase; Provisional
Probab=99.85 E-value=1.2e-19 Score=176.00 Aligned_cols=303 Identities=15% Similarity=0.076 Sum_probs=195.9
Q ss_pred cccccccCC-ChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHH
Q 014163 59 NLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF 137 (429)
Q Consensus 59 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~ 137 (429)
+|....++. +++.+.+++..++.. ...| ..++..+++ +.+++++|++++ .+.+|+|+++++..++.+.
T Consensus 26 ~l~~~~~~~~~~~~~~~a~~~~~~~-~~~y-~~~g~~~lr----~~ia~~~~~~~~-----~I~~~~G~~~~l~~~~~~~ 94 (352)
T PRK03321 26 KLSSNETPFGPLPSVRAAIARAAAG-VNRY-PDMGAVELR----AALAEHLGVPPE-----HVAVGCGSVALCQQLVQAT 94 (352)
T ss_pred eccCCCCCCCCCHHHHHHHHHHHHh-cCcC-CCCcHHHHH----HHHHHHhCcCHH-----HEEECCCHHHHHHHHHHHh
Confidence 344444444 456677777766542 2223 234555554 457777787642 3788999999888776655
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCcccc
Q 014163 138 KRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGE 217 (429)
Q Consensus 138 ~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~ 217 (429)
.. .++.|+++.+++..+..+++..|++++.+|++++ +.+|++++++++++++++|++++++||||.
T Consensus 95 ~~-------------~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~ 160 (352)
T PRK03321 95 AG-------------PGDEVIFAWRSFEAYPILVQVAGATPVQVPLTPD-HTHDLDAMAAAITDRTRLIFVCNPNNPTGT 160 (352)
T ss_pred cC-------------CCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCCC-CCCCHHHHHHhhccCCCEEEEeCCCCCcCC
Confidence 33 2368999999988888888999999999998754 679999999999989999999999999999
Q ss_pred ccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCc--ccc--CCCCeeEEEEcCcccC-CCCCCeEEEEEeC
Q 014163 218 FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE--WDF--RLPLVKSINVSGHKYG-LVYAGVGWVVWRT 292 (429)
Q Consensus 218 ~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~--~~~~~d~~~~s~hK~~-~~p~g~g~l~~~~ 292 (429)
+.|.++|.++|+++.. ++++++|++|+.+.. ..... ... ..+++ .+..|.-|.+ +++.++|+++.+
T Consensus 161 ~~~~~~l~~l~~~~~~----~~~ii~De~y~~~~~---~~~~~~~~~~~~~~~~v-i~~~S~SK~~g~~GlRiG~~v~~- 231 (352)
T PRK03321 161 VVTPAELARFLDAVPA----DVLVVLDEAYVEYVR---DDDVPDGLELVRDHPNV-VVLRTFSKAYGLAGLRVGYAVGH- 231 (352)
T ss_pred CcCHHHHHHHHHhCCC----CeEEEEechHHHhcc---CcCCCcHHHHHhhCCCE-EEEecchHHhhhHHHhhhhhcCC-
Confidence 9999999999997310 899999999986432 11110 011 11223 3333556765 477889998864
Q ss_pred CCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC
Q 014163 293 KDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL-GFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV 371 (429)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l-~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 371 (429)
++ +.+.+... . .. .+ ...+++.+++..+ ..+.+.+..++..+.++++.+.|++.+ +.+. ++
T Consensus 232 ~~-~~~~~~~~--~-----~~----~~---~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~~-~~~~-~~- 293 (352)
T PRK03321 232 PE-VIAALRKV--A-----VP----FS---VNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAALRAAG-WTVP-PS- 293 (352)
T ss_pred HH-HHHHHHHh--c-----CC----CC---CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-CccC-CC-
Confidence 22 22222111 0 00 11 1233444444443 334456666666777788999998874 6543 22
Q ss_pred CceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 372 GVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 372 ~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
..+++.+++. .+..++.+.|. ++|+.+..+ +...+||+++.+
T Consensus 294 ~g~~i~i~l~----~~~~~~~~~l~----~~gI~v~~~------~~~~iRi~~~~~ 335 (352)
T PRK03321 294 QANFVWLPLG----ERTADFAAAAA----EAGVVVRPF------AGEGVRVTIGAP 335 (352)
T ss_pred CCCEEEEeCC----CCHHHHHHHHH----HCCEEEEcc------CCCcEEEeeCCH
Confidence 4455555542 24566777776 899998753 123499999764
No 170
>PRK05968 hypothetical protein; Provisional
Probab=99.85 E-value=2.1e-19 Score=175.69 Aligned_cols=250 Identities=17% Similarity=0.147 Sum_probs=173.0
Q ss_pred hhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchH----
Q 014163 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC---- 166 (429)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s---- 166 (429)
|...++| +.+++++|.+. .+++++|+.|+.+++.+... .+++|+++.+.|.+
T Consensus 63 p~~~~le----~~lA~l~g~~~-------av~~~sG~~Ai~~al~al~~-------------~Gd~Vl~~~~~y~~t~~~ 118 (389)
T PRK05968 63 PTVRAFE----EMLAKLEGAED-------ARGFASGMAAISSTVLSFVE-------------PGDRIVAVRHVYPDAFRL 118 (389)
T ss_pred hhHHHHH----HHHHHHhCCCc-------EEEECCHHHHHHHHHHHHhC-------------CCCEEEEeCCCchHHHHH
Confidence 3444555 55899999864 56677888899888876543 23689998888875
Q ss_pred HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecc
Q 014163 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (429)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a 246 (429)
+...+...|++++.++.+ |++++++++ ++|++|++.+++++++.+.|+++|+++|+++ |+++++|++
T Consensus 119 ~~~~~~~~G~~v~~vd~~------d~~~l~~~i-~~tklV~ie~pt~~~~~~~dl~~i~~la~~~------gi~vivD~a 185 (389)
T PRK05968 119 FETILKRMGVEVDYVDGR------DEEAVAKAL-PGAKLLYLESPTSWVFELQDVAALAALAKRH------GVVTMIDNS 185 (389)
T ss_pred HHHHHHHcCceEEEeCCC------CHHHHHHhc-ccCCEEEEECCCCCCCcHHHHHHHHHHHHHc------CCEEEEECC
Confidence 445677789999888642 789999988 6789999999999999999999999999999 999999999
Q ss_pred cccccccccCCCCccccCCCCeeEEEEcCcccCCCCCC--eEEEEEeCCCCccccccc-ccCCCCCCCCCceeccCCchh
Q 014163 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVF-HINYLGSDQPTFTLNFSKGSS 323 (429)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g--~g~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~tr~~~ 323 (429)
|+.+.. .. ... .++|.++.|++|++.+|.+ .|+++. +++.. +.+.. ...+.+. ..
T Consensus 186 ~a~~~~--~~---p~~---~g~Divv~S~tK~l~g~~~~~gG~i~~-~~~~~-~~l~~~~~~~~g~---------~~--- 243 (389)
T PRK05968 186 WASPVF--QR---PIT---LGVDLVIHSASKYLGGHSDTVAGVVAG-SKEHI-ARINAEAYPYLGA---------KL--- 243 (389)
T ss_pred Ccchhc--cC---chh---cCCcEEEeeccccccCCCCeEEEEEEE-CHHHH-HHHHHHHHHhCCC---------CC---
Confidence 976431 11 111 2589999999999988754 566553 33322 22111 1122221 11
Q ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC-----------CceEEEEEecCCCCCCHHHHH
Q 014163 324 QIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV-----------GVPLVAFSLKDSSAHTVFEIS 392 (429)
Q Consensus 324 ~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-----------~~~~v~f~~~~~~~~~~~~~~ 392 (429)
....+|..+..+ +.+..++++..++++++.+.|+++|.++.+..|. ..++++|.+++ +.+..++.
T Consensus 244 ~~~~A~~~l~~L--~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~--~~~~~~f~ 319 (389)
T PRK05968 244 SPFEAWLLLRGL--RTLPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFRE--GIDVRAFA 319 (389)
T ss_pred ChHHHHHHHccc--CcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECC--HHHHHHHH
Confidence 123344444333 4568888999999999999999999887665331 24599999863 33445555
Q ss_pred HHHHHHHhccCceec
Q 014163 393 EGLRKKLNRFQVVYP 407 (429)
Q Consensus 393 ~~L~~~l~~~G~~~~ 407 (429)
+.|. ..++.++
T Consensus 320 ~~L~----~~~~~~s 330 (389)
T PRK05968 320 DALK----LFRLGVS 330 (389)
T ss_pred HhCC----ccEEecC
Confidence 5554 6665444
No 171
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.85 E-value=4.8e-19 Score=170.20 Aligned_cols=298 Identities=16% Similarity=0.135 Sum_probs=192.1
Q ss_pred CCCccccccccCCC-hHHHHHHHHHHcCcCCCC-CccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHH
Q 014163 55 NPRLNLASFVTTWM-EPECDKLVMASINKNYVD-MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIML 132 (429)
Q Consensus 55 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~ 132 (429)
+..++|....++.+ ++.+.+++.+++..+..+ | ..++..++++.+.+++.+. ++++ ..+++|+|+++++.+
T Consensus 19 ~~~i~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~Y-~~~~~~~Lr~aia~~~~~~-~~~~-----~~i~it~Ga~~~i~~ 91 (335)
T PRK14808 19 RDRTYLALNENPFPFPEDLVDEVFRRLNSDTLRIY-YDSPDEELIEKILSYLDTD-FLSK-----NNVSVGNGADEIIYV 91 (335)
T ss_pred CceeEecCCCCCCCCCHHHHHHHHHHhhhhhhhcC-CCCChHHHHHHHHHHhCCC-CCCc-----ceEEEcCCHHHHHHH
Confidence 34455666666554 456788877766543222 2 2345666666655555442 2543 248899999999998
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCC
Q 014163 133 AGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGS 212 (429)
Q Consensus 133 al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~ 212 (429)
++.++ +.|++.+++|..+..+++..|++++.+|++++ +.++... + .+++++++++|+
T Consensus 92 ~~~~~-----------------d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~----~-~~~~~i~i~nP~ 148 (335)
T PRK14808 92 MMLMF-----------------DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKD-LRIPEVN----V-GEGDVVFIPNPN 148 (335)
T ss_pred HHHHh-----------------CcEEECCCCHHHHHHHHHHcCCeEEEecCCCc-CCCChhH----c-cCCCEEEEeCCC
Confidence 88765 25889999999999999999999999999765 6565433 2 356889999999
Q ss_pred CccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcccc-CCCCeeEEEEcCcc-cCCCCCCeEEEEE
Q 014163 213 TLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHK-YGLVYAGVGWVVW 290 (429)
Q Consensus 213 ~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~d~~~~s~hK-~~~~p~g~g~l~~ 290 (429)
||||.+-+.+++.+++ ++ ++++++|++|..+.- ......+ ..+++-++. |.-| +++++.++||++.
T Consensus 149 NPTG~~~s~~~l~~l~-~~------~~~ii~DE~Y~~f~~----~~~~~~~~~~~~vi~~~-S~SK~~~l~GlRvG~~v~ 216 (335)
T PRK14808 149 NPTGHVFEREEIERIL-KT------GAFVALDEAYYEFHG----ESYVDLLKKYENLAVIR-TFSKAFSLAAQRIGYVVS 216 (335)
T ss_pred CCCCCCcCHHHHHHHH-hc------CCEEEEECchhhhcC----CchHHHHHhCCCEEEEE-echhhccCcccceEEEEe
Confidence 9999999999999998 58 899999999986421 1100001 123344444 4455 4558999999987
Q ss_pred eCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeC
Q 014163 291 RTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL-GFEGYKNIMENCMGNARALREGLEKTGRFEILSK 369 (429)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l-~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 369 (429)
.+ + +.+.+...... + +. ..+++.++...+ ..+.+++..+...+.++++.+.|++.+ +.+..
T Consensus 217 ~~-~-~~~~l~~~~~~-------~----~~---~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~~- 278 (335)
T PRK14808 217 SE-K-FIDAYNRVRLP-------F----NV---SYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREMG-YRITD- 278 (335)
T ss_pred CH-H-HHHHHHHhcCC-------C----CC---CHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHCC-CEECC-
Confidence 43 2 22222111100 1 11 112223332222 233456667777778899999999885 77653
Q ss_pred CCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 370 DVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 370 ~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
+ ..+++.+++++ .+..++.+.|. ++|+.++.+ . .++||+++.+
T Consensus 279 ~-~g~f~~~~l~~---~~~~~~~~~l~----~~Gi~V~~~-----~--~~~Risi~~~ 321 (335)
T PRK14808 279 S-RGNFVFIFMEK---EEKERLLEHLR----AKNIAVRSF-----R--EGVRITIGKR 321 (335)
T ss_pred C-CCeEEEEeCCC---ccHHHHHHHHH----HCCeEEEEC-----C--CCeEEecCCH
Confidence 3 56666666542 23456666666 999998853 1 3599999864
No 172
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.85 E-value=2.7e-19 Score=178.48 Aligned_cols=217 Identities=12% Similarity=0.032 Sum_probs=147.4
Q ss_pred ccccccccCCChHH-HHHHHHHHcCcCCCCCccChhhHHHHHHHHHHH-HHhhCCCCCCCCCCCceEeCCchHHHHHHHH
Q 014163 58 LNLASFVTTWMEPE-CDKLVMASINKNYVDMDEYPVTTELQNRCVNMI-AHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (429)
Q Consensus 58 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~l-a~l~g~~~~~~~~~~~~~t~g~t~a~~~al~ 135 (429)
++++.+.|++++|. +.+++..... .+|....+..++.+++.+++ .+.++..........+++|+|+++|+.+++.
T Consensus 103 i~l~~g~p~~~~~~~v~e~~~~~~~---~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~ 179 (527)
T PRK09275 103 VSYVRDQLGFDADEFVYELVDGIIG---DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFD 179 (527)
T ss_pred HhhcCCCCCCCCCHHHHHHHHHHhc---CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHH
Confidence 45777777776555 6664443432 24667778888888888744 4433332111101248899999999999888
Q ss_pred HHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEec--c-CCccccCHHHHHHHhhhCCeEEEEeeCC
Q 014163 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL--E-EGYYVMNPVKAVELVDENTICVAAILGS 212 (429)
Q Consensus 136 a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~--~-~~~~~~d~~~l~~~i~~~~~~v~~~~~~ 212 (429)
++...... ..+++|+++.|+|..+...+++.|.+++.+++ + +++|.+|+++|++++++++++|++++|+
T Consensus 180 aL~~~~ll--------~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~~tkai~l~nP~ 251 (527)
T PRK09275 180 SLKENGLL--------KAGDKIALMTPIFTPYLEIPELPRYDLEVVHINADEENEWQYPDSELEKLRDPSIKALFLVNPS 251 (527)
T ss_pred HHhhhhcC--------CCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeecCcccCCCCCHHHHHhhcCCCCCEEEEeCCc
Confidence 74321100 02379999999999999998888766555554 4 3458999999999999999999999999
Q ss_pred CccccccC---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEE
Q 014163 213 TLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVV 289 (429)
Q Consensus 213 ~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~ 289 (429)
||||.+-+ +++|+++|+++. .++||++|++|+.+.-.+.. . ....-+++-.+...++.++++++++||++
T Consensus 252 NPTG~v~s~e~l~~I~~ia~~~~----~~l~II~DEvY~~f~~~~~s--~-~~~~~~~~I~v~SfSK~f~mtG~RlG~i~ 324 (527)
T PRK09275 252 NPPSVAMSDESLEKIADIVNEKR----PDLMIITDDVYGTFVDDFRS--L-FAVLPYNTILVYSFSKYFGATGWRLGVIA 324 (527)
T ss_pred CCcCCCCCHHHHHHHHHHHHhcC----CCcEEEECCCChhhcccccC--H-HHhCCCCEEEEeehhhhccCcHhHHhhhh
Confidence 99999955 778888885431 18999999999874321100 0 01111245555555555678999999988
Q ss_pred EeC
Q 014163 290 WRT 292 (429)
Q Consensus 290 ~~~ 292 (429)
..+
T Consensus 325 ~~~ 327 (527)
T PRK09275 325 LHE 327 (527)
T ss_pred cCc
Confidence 754
No 173
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.84 E-value=5.6e-19 Score=171.82 Aligned_cols=277 Identities=16% Similarity=0.064 Sum_probs=182.5
Q ss_pred HHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCcee
Q 014163 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVEL 178 (429)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v 178 (429)
++++.+++++|++.+ .+++|+|+++++.+++.++... +++.|++++++|..+...++..|+++
T Consensus 63 ~lr~~ia~~~~~~~~-----~I~~t~G~~~~l~~~~~~~~~~------------g~~~vlv~~p~y~~~~~~~~~~g~~~ 125 (364)
T PRK04781 63 GLRSALAALYGCAPE-----QLLIGRGSDEAIDLLVRALCVP------------GRDAVLVTPPVFGMYAVCARLQNAPL 125 (364)
T ss_pred HHHHHHHHHhCcChH-----HEEEeCCHHHHHHHHHHHhcCC------------CCCeEEEcCCChHHHHHHHHHcCCEE
Confidence 455567778888652 3889999999999888877541 12478999999888888889999999
Q ss_pred EEEecc--CCccccCHHHHHHHh-hhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeeccccccccccc
Q 014163 179 KEVKLE--EGYYVMNPVKAVELV-DENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (429)
Q Consensus 179 ~~v~~~--~~~~~~d~~~l~~~i-~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (429)
+.+|++ ++++.+|++++++.+ ++++++|++++|+||||.+.+.+++.++++...+ ++++++|++|+.+..
T Consensus 126 ~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~----~~~iI~Deay~~f~~--- 198 (364)
T PRK04781 126 VEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQG----KALVVVDEAYGEFSD--- 198 (364)
T ss_pred EEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCC----CcEEEEeCcchhhcC---
Confidence 999984 233678999986554 6788999999999999999999999998876411 789999999987531
Q ss_pred CCCCcccc-CCCCeeEEEEcCccc-CCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHH
Q 014163 256 YPDLEWDF-RLPLVKSINVSGHKY-GLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFI 333 (429)
Q Consensus 256 ~~~~~~~~-~~~~~d~~~~s~hK~-~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~ 333 (429)
.+...... ..+++-++ -+.-|. ++++.++||++.. ++.. ..+..... .+ + .....+.++..
T Consensus 199 ~~~~~~~~~~~~~vi~~-~SfSK~~gl~GlRvGy~v~~-~~l~-~~l~~~~~-------~~----~---~~~~~~~~a~~ 261 (364)
T PRK04781 199 VPSAVGLLARYDNLAVL-RTLSKAHALAAARIGSLIAN-AELI-AVLRRCQA-------PY----P---VPTPCAALAEQ 261 (364)
T ss_pred CcchHHHHhhCCCEEEE-ecChhhcccccceeeeeeCC-HHHH-HHHHhccC-------CC----C---CCHHHHHHHHH
Confidence 11100001 12344444 455564 5589999998863 2222 22211111 01 1 11222333333
Q ss_pred HcC---HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccC
Q 014163 334 RLG---FEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKL 410 (429)
Q Consensus 334 ~l~---~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~ 410 (429)
.+. .+.+.+.+++..+.++++.+.|++++++..+.++ ..+++.++++ +..++.+.|. ++|+.++.+.
T Consensus 262 ~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~-~g~f~~~~~~-----~~~~~~~~l~----~~gI~v~~~~ 331 (364)
T PRK04781 262 ALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRVYPS-QGNFLLVRFD-----DAEAAFQALL----AAGVVVRDQR 331 (364)
T ss_pred HHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCC-CCcEEEEEcC-----CHHHHHHHHH----HCCeEEeeCC
Confidence 332 2345566677788899999999998766434443 4566666653 2355666666 9999998762
Q ss_pred CCCCCCceEEEEEeccc
Q 014163 411 PMSYPWSTKLRVISHLR 427 (429)
Q Consensus 411 ~~~~~~~~~lRi~~~~~ 427 (429)
... ....++||+++.+
T Consensus 332 ~~~-~~~~~~Ris~~~~ 347 (364)
T PRK04781 332 AAP-RLSDALRITLGTP 347 (364)
T ss_pred CCC-CCCCeEEEeCCCH
Confidence 111 2235799999864
No 174
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.84 E-value=8.6e-19 Score=170.88 Aligned_cols=310 Identities=15% Similarity=0.071 Sum_probs=196.9
Q ss_pred cccccccCC-ChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHH
Q 014163 59 NLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAF 137 (429)
Q Consensus 59 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~ 137 (429)
+|..+.++. +++.+.+++.+.... ...|.. +...++ ++.+++.+|++++ .+++|+|+++++..++.++
T Consensus 36 ~l~~~~~~~~~~~~~~~a~~~~~~~-~~~Y~~-~~~~~L----r~~ia~~~~~~~~-----~I~it~G~~~~l~~~~~~~ 104 (369)
T PRK08153 36 RIGANESGFGPSPSVIAAMREAAAE-IWKYGD-PENHDL----RHALAAHHGVAPE-----NIMVGEGIDGLLGLIVRLY 104 (369)
T ss_pred EecCCCCCCCCCHHHHHHHHHHHHH-hhcCCC-CccHHH----HHHHHHHhCCCHH-----HEEEcCCHHHHHHHHHHHh
Confidence 555555554 456677777765532 122221 223444 4556777787652 4899999999998888876
Q ss_pred HHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhh-hCCeEEEEeeCCCccc
Q 014163 138 KRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD-ENTICVAAILGSTLTG 216 (429)
Q Consensus 138 ~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~~~tG 216 (429)
.+ .++.|++++++|+.+...++..|++++.+|.+.+ .+|++++++.+. +++++|+++.|+||||
T Consensus 105 ~~-------------~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~--~~~~~~l~~~~~~~~~~~i~l~~P~NPtG 169 (369)
T PRK08153 105 VE-------------PGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDD--REDLDALLDAARRENAPLVYLANPDNPMG 169 (369)
T ss_pred cC-------------CCCEEEECCCcchHHHHHHHHcCCeEEEeeCCCC--CCCHHHHHHHhcccCCcEEEEeCCCCCCC
Confidence 54 2368999999999999888899999999998654 489999987764 5788999999999999
Q ss_pred cccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcc-cCCCCCCeEEEEEeCCCC
Q 014163 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHK-YGLVYAGVGWVVWRTKDD 295 (429)
Q Consensus 217 ~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK-~~~~p~g~g~l~~~~~~~ 295 (429)
.+.+.+++.++++.+.+ ++++++|++|+.+.. ........-..+++ ++..+.-| +++++.++||++... +
T Consensus 170 ~~~~~~~l~~l~~~~~~----~~~lI~DE~y~~~~~--~~~~~~~~~~~~~~-i~~~SfSK~~g~~GlRiG~~v~~~-~- 240 (369)
T PRK08153 170 SWHPAADIVAFIEALPE----TTLLVLDEAYCETAP--AGAAPPIDTDDPNV-IRMRTFSKAYGLAGARVGYAIGAP-G- 240 (369)
T ss_pred CCCCHHHHHHHHHhCCC----CcEEEEeCchhhhcC--cccchhhhhcCCCE-EEEecchHhccCcchheeeeecCH-H-
Confidence 99999888888876521 789999999986431 10000111011233 33344455 456889999998642 2
Q ss_pred cccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCce
Q 014163 296 LPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-FEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVP 374 (429)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~-~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~ 374 (429)
+.+.+...... + + .....+.++...+. .+.+++..+...++++++.+.|++.+ +... + ...+
T Consensus 241 ~~~~l~~~~~~-------~----~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~g-~~~~-p-~~~~ 303 (369)
T PRK08153 241 TIKAFDKVRNH-------F----G---MNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARANG-LTPL-P-SATN 303 (369)
T ss_pred HHHHHHHhhcC-------C----C---CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-CccC-C-CcCc
Confidence 22222111110 1 1 12334555555553 34466677778889999999998875 6543 3 2455
Q ss_pred EEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 375 LVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 375 ~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
++.+..... .....++.+.|. ++|+.++. +....+..++|++++++
T Consensus 304 f~~~~~~~~-~~~a~~l~~~l~----~~Gi~v~~--p~~~~~~~~iRis~~~~ 349 (369)
T PRK08153 304 FVAIDCGRD-GAFARAVLDGLI----ARDIFVRM--PGVAPLDRCIRVSCGPD 349 (369)
T ss_pred EEEEECCCC-cccHHHHHHHHH----HCCeEEee--CCCCCCCCeEEEecCCH
Confidence 655554321 223445555555 89998852 22222345899999764
No 175
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.84 E-value=7.3e-19 Score=174.57 Aligned_cols=296 Identities=11% Similarity=0.051 Sum_probs=189.0
Q ss_pred CccChhhHHHHHHHHHHHHHhhCCC--CCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCc
Q 014163 87 MDEYPVTTELQNRCVNMIAHLFNTP--VADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQ 164 (429)
Q Consensus 87 ~~~~~~~~~le~~~~~~la~l~g~~--~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h 164 (429)
|....|...|++++.+++.+.+|.. .+. ..+++|+|+++|+.+.+.++++ .++.|+++.|.|
T Consensus 91 y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p---~~Ivit~G~t~al~~l~~~l~~-------------pGD~Vlv~~P~Y 154 (447)
T PLN02607 91 FQDYHGLKSFRQAMASFMEQIRGGKARFDP---DRIVLTAGATAANELLTFILAD-------------PGDALLVPTPYY 154 (447)
T ss_pred cCCCcchHHHHHHHHHHHHHhcCCCCCcCH---HHeEEcCChHHHHHHHHHHhCC-------------CCCEEEEcCCCC
Confidence 3344588899999999999887732 221 2488999999999888777754 236899999999
Q ss_pred hHHHHHHH-hcCceeEEEeccC-CccccCHHHHHHHhhh------CCeEEEEeeCCCccccccC---hHHHHHHHHHhhh
Q 014163 165 VCWEKFAR-YFEVELKEVKLEE-GYYVMNPVKAVELVDE------NTICVAAILGSTLTGEFED---VKLLHDLLTKKNE 233 (429)
Q Consensus 165 ~s~~~~~~-~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~------~~~~v~~~~~~~~tG~~~~---l~~I~~la~~~~~ 233 (429)
..+...+. ..|++++.|++++ +++.+|++++++++++ ++++|++++|+||||.+-+ +++|.++|++|
T Consensus 155 ~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~-- 232 (447)
T PLN02607 155 PGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRK-- 232 (447)
T ss_pred cchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHC--
Confidence 98887766 4799999998863 3478999999999875 6789999999999999855 78888999999
Q ss_pred ccCCCccEEeecccccccccccCCCCc--c----cc---C-CCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccc
Q 014163 234 ETGWDTPIHVDAASGGFIAPFLYPDLE--W----DF---R-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFH 303 (429)
Q Consensus 234 ~~~~~~~l~vD~a~~~~~~~~~~~~~~--~----~~---~-~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~ 303 (429)
++++++|++|+.... ..+... . .. . -+++.++...++-++.++.++|+++..++... ..+...
T Consensus 233 ----~i~lI~DEiYa~~~f--~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~-~~~~~~ 305 (447)
T PLN02607 233 ----NIHLVSDEIYSGSVF--SASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVV-TTARRM 305 (447)
T ss_pred ----CCEEEEecccccccc--CCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHH-HHHHHH
Confidence 999999999986321 111110 0 00 1 12355554444446668999999987543221 211111
Q ss_pred cCCCCCCCCCceeccCCchhHHHHHHHHHHHcCH-----HHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEE
Q 014163 304 INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF-----EGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAF 378 (429)
Q Consensus 304 ~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~-----~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f 378 (429)
..+. . .....+.++...+.. ..+++..++..+.++.+.+.|++.+ +.... +....++.+
T Consensus 306 ~~~~-----------~---~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~g-i~~~~-~~ag~fvw~ 369 (447)
T PLN02607 306 SSFT-----------L---VSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRAG-IECLK-GNAGLFCWM 369 (447)
T ss_pred hhcC-----------C---CCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCccc-CCeeEEEEE
Confidence 1110 0 111233333444432 2234556667778888999999875 66543 323334445
Q ss_pred EecCC--CC--CCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEecc
Q 014163 379 SLKDS--SA--HTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHL 426 (429)
Q Consensus 379 ~~~~~--~~--~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~ 426 (429)
+++.. .. ....++.++|. .+.|+.+.+.........+++|||+++
T Consensus 370 ~L~~~~~~~~~~~e~~l~~~ll---~~~gV~v~pG~~f~~~~~g~fRi~fa~ 418 (447)
T PLN02607 370 NLSPLLETPTREGELALWDSIL---REVKLNISPGSSCHCSEPGWFRVCFAN 418 (447)
T ss_pred EchHhhcCCCchhHHHHHHHHH---HhCCEEEcCccccCCCCCCEEEEEecc
Confidence 55321 00 11223444443 257998876522223346789999985
No 176
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.84 E-value=3.3e-19 Score=173.26 Aligned_cols=294 Identities=15% Similarity=0.066 Sum_probs=189.5
Q ss_pred HHHHHHHHHcCcCCCCCcc-ChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcC
Q 014163 71 ECDKLVMASINKNYVDMDE-YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQG 149 (429)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~-~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g 149 (429)
+..+++.+.+..++. .. ++...++|++ +++++|.+. .+.+++||.|+.+++.++.-+
T Consensus 6 e~~~~v~~~l~s~~~--~~~g~~~~~fE~~----~a~~~g~~~-------~~~~~sgt~Al~~al~~l~~~--------- 63 (363)
T PF01041_consen 6 EEIDAVLEVLRSGWL--STYGPYVEEFEKE----FAEYFGVKY-------AVAVSSGTSALHLALRALGLG--------- 63 (363)
T ss_dssp HHHHHHHHHHHHTCC--SSSSHHHHHHHHH----HHHHHTSSE-------EEEESSHHHHHHHHHHHTTGG---------
T ss_pred HHHHHHHHHHHhCCc--cCCCHHHHHHHHH----HHHHhCCCe-------EEEeCChhHHHHHHHHhcCCC---------
Confidence 355666777776643 33 6778888876 788889864 899999999999999986432
Q ss_pred CCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHH
Q 014163 150 KPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLT 229 (429)
Q Consensus 150 ~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~ 229 (429)
.+++|++|..++.+...++...|+++++++++++++.||++.++++|+++|++|+++| ..|...|+++|.++|+
T Consensus 64 ---~gdeVi~p~~t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~t~ai~~~h---~~G~~~d~~~i~~~~~ 137 (363)
T PF01041_consen 64 ---PGDEVIVPAYTFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPKTKAILVVH---LFGNPADMDAIRAIAR 137 (363)
T ss_dssp ---TTSEEEEESSS-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTTEEEEEEE----GGGB---HHHHHHHHH
T ss_pred ---cCceEecCCCcchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccCccEEEEec---CCCCcccHHHHHHHHH
Confidence 2369999999999999999999999999999977799999999999999999886554 4688889999999999
Q ss_pred HhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCC
Q 014163 230 KKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGS 309 (429)
Q Consensus 230 ~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~ 309 (429)
++ |++|+.|+|++.+.. .....-. ....+-++++...|.+.++-| |++++++++.. +.+.....+...
T Consensus 138 ~~------~i~lIeD~a~a~g~~--~~g~~~G--~~gd~~~fSf~~~K~i~~geG-G~v~~~~~~~~-~~~~~~~~~g~~ 205 (363)
T PF01041_consen 138 KH------GIPLIEDAAQAFGAR--YKGRPVG--SFGDIAIFSFHPTKIITTGEG-GAVVTNDPELA-ERARALRNHGRS 205 (363)
T ss_dssp HT------T-EEEEE-TTTTT-E--ETTEETT--SSSSEEEEESSTTSSS-SSS--EEEEESTHHHH-HHHHHHTBTTEE
T ss_pred Hc------CCcEEEccccccCce--eCCEecc--CCCCceEecCCCCCCCcCCCC-eeEEecHHHHH-HHhhhhhccCcC
Confidence 99 999999999987542 2211111 123455666666788855544 77777664332 222111111100
Q ss_pred --CCCCcee---ccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCC-----ceEEEEE
Q 014163 310 --DQPTFTL---NFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVG-----VPLVAFS 379 (429)
Q Consensus 310 --~~~~~~~---~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-----~~~v~f~ 379 (429)
....+.. .|.. ..+-.+.+++.....+.+++.+++.+++++++.+.|.+++++.....++. ...+.+.
T Consensus 206 ~~~~~~~~~~~~~g~n--~rm~~~~AAigl~QL~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~ 283 (363)
T PF01041_consen 206 RDAFRRYRHELPPGYN--FRMSELQAAIGLAQLKRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIR 283 (363)
T ss_dssp TSECSTTEESSSS--B---B-BHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEE
T ss_pred ccccccccccccCCcc--cccHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCccccccccccccccccccccc
Confidence 0011110 0111 11112223332223356788899999999999999999998866654322 2245666
Q ss_pred ecCCCCCCHHHHHHHHHHHHhccCceecccC
Q 014163 380 LKDSSAHTVFEISEGLRKKLNRFQVVYPQKL 410 (429)
Q Consensus 380 ~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~ 410 (429)
+++....+.+++.+.|. ++||....++
T Consensus 284 ~~~~~~~~rd~l~~~L~----~~GI~~~~~~ 310 (363)
T PF01041_consen 284 LPDEALADRDELVEALR----ARGIETRPHY 310 (363)
T ss_dssp ETCCGCSTHHHHHHHHH----HTTBEEBCST
T ss_pred ccccccchHHHHHHHHH----HCCCcccccc
Confidence 65431235667777777 9999987654
No 177
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.84 E-value=1.1e-18 Score=161.36 Aligned_cols=311 Identities=15% Similarity=0.120 Sum_probs=214.5
Q ss_pred CChHHHHHHHHHHcCcC-----CC--CCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKN-----YV--DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~ 139 (429)
..++.+.+++.+.+.+- ++ .|..-.-..++|+.+.+...+|||++. ..+-..+|+.||..++.++..
T Consensus 37 ~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~------anVQPhSGs~AN~av~~All~ 110 (413)
T COG0112 37 FTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEY------ANVQPHSGSQANQAVYLALLQ 110 (413)
T ss_pred cCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHHHHHHHHhCCCc------cccCCCCchHHHHHHHHHHcC
Confidence 34577777665544331 11 133334678999999999999999984 355667899999999988876
Q ss_pred HHHHHHHhcCCCCCCcEEE---EcCCCchHHHHHHHhcCce--eEEEeccCCccccCHHHHHHHhhh-CCeEEEEeeCCC
Q 014163 140 KWQQKRKEQGKPYDKPNIV---TGANVQVCWEKFARYFEVE--LKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGST 213 (429)
Q Consensus 140 ~~~~~~~~~g~~~~~~~vi---~~~~~h~s~~~~~~~~G~~--v~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~~ 213 (429)
+ ++.|+ ++...|-+...-....|.- +...+++.+++.+|.|++++.+.+ +|++| +...|.
T Consensus 111 p-------------GDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e~kPK~i-i~G~Sa 176 (413)
T COG0112 111 P-------------GDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKEVKPKLI-IAGGSA 176 (413)
T ss_pred C-------------CCeEecccCCCCCcccCCCCCCccceeEEeEecccccccCccCHHHHHHHHHHhCCCEE-EECccc
Confidence 2 25665 3455665554333444544 444556766689999999998886 56654 444444
Q ss_pred ccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCC
Q 014163 214 LTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (429)
Q Consensus 214 ~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~ 293 (429)
+ -..-|++++.++|++. |+++.+|.||-.++. ....++- .++.+|+++.+.||++.+|.| |++++++.
T Consensus 177 Y-~r~id~~~~reIad~V------GA~L~~DmAHiaGLV--A~G~~p~--P~~~AdvVTtTTHKTlrGPrG-G~Il~~~e 244 (413)
T COG0112 177 Y-SRPIDFKRFREIADEV------GAYLMVDMAHVAGLI--AGGVHPN--PLPHADVVTTTTHKTLRGPRG-GIILTNDE 244 (413)
T ss_pred c-ccccCHHHHHHHHHHh------CceEEehHHHHHHHH--hcccCCC--CCCccceEeCCcccCCCCCCc-eEEEeccH
Confidence 4 4455799999999999 999999999954433 1111111 235699999999999998887 77777653
Q ss_pred CCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCc
Q 014163 294 DDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGV 373 (429)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 373 (429)
+.. +.+. ..-+ +.++|.+....+.+...+++...+.+++++.++..++++.|.+.|.+.+ ++++....+.
T Consensus 245 el~-kkin-~aVF-------Pg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G-~~vvsGgTdn 314 (413)
T COG0112 245 ELA-KKIN-SAVF-------PGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERG-FKVVSGGTDN 314 (413)
T ss_pred HHH-HHhh-hhcC-------CccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcC-CeEecCCccc
Confidence 322 2111 1111 1223444445677777788777778899999999999999999999987 9998754467
Q ss_pred eEEEEEecCCCCCCHHHHHHHHHHHHhccCceeccc-CCCC---CCCceEEEEEe
Q 014163 374 PLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK-LPMS---YPWSTKLRVIS 424 (429)
Q Consensus 374 ~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~-~~~~---~~~~~~lRi~~ 424 (429)
+++.+.+.+. +.+..+....|. +.||.++.. .|.+ ......|||-.
T Consensus 315 Hl~lVDl~~~-~~~Gk~ae~~L~----~~~It~NKN~iP~D~~~p~~tSGIRiGt 364 (413)
T COG0112 315 HLVLVDLRSK-GLTGKKAEAALE----RAGITVNKNAIPFDPESPFVTSGIRIGT 364 (413)
T ss_pred eEEEEEcccC-CCCHHHHHHHHH----HcCEeeccCCCCCCCCCCCCCccceecc
Confidence 8888888743 677888888888 899998765 4433 23345688743
No 178
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.84 E-value=2.7e-19 Score=174.38 Aligned_cols=295 Identities=19% Similarity=0.156 Sum_probs=193.3
Q ss_pred CCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCC
Q 014163 84 YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANV 163 (429)
Q Consensus 84 ~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~ 163 (429)
...|....+..++++.+.+++.+-.|.+.+.. ....+++|+.+++..++..+... .++.|+++.++
T Consensus 37 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~--~~i~~~~G~~~~~~~~~~~~~~~------------~~~~vlv~~P~ 102 (363)
T PF00155_consen 37 FLGYPPPQGYPELREAIADFLGRRYGVPVDPE--ANILVTSGAQAALFLLLRLLKIN------------PGDTVLVPDPC 102 (363)
T ss_dssp CTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGG--EGEEEESHHHHHHHHHHHHHHSS------------TTSEEEEEESS
T ss_pred cccCCCchhhHHHHHHHHHHhhhccCcccccc--eEEEEecccccchhhhhhccccc------------ccccceecCCc
Confidence 44566777889999998888886666655321 13666666666666555555210 23689999999
Q ss_pred chHHHHHHHhcCceeEEEecc-CCccccCHHHHHHHhhh------CCeEEEEeeCCCccccccC---hHHHHHHHHHhhh
Q 014163 164 QVCWEKFARYFEVELKEVKLE-EGYYVMNPVKAVELVDE------NTICVAAILGSTLTGEFED---VKLLHDLLTKKNE 233 (429)
Q Consensus 164 h~s~~~~~~~~G~~v~~v~~~-~~~~~~d~~~l~~~i~~------~~~~v~~~~~~~~tG~~~~---l~~I~~la~~~~~ 233 (429)
|..+...++..|++++.+|++ ++++.+|+++|++.+++ ++++|+++.++||||..-+ +++|+++|++|
T Consensus 103 y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~-- 180 (363)
T PF00155_consen 103 YPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREY-- 180 (363)
T ss_dssp STHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHT--
T ss_pred cccccccccccCceeeeccccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhccc--
Confidence 999999999999999999975 34589999999999998 5789999999999998854 55566669999
Q ss_pred ccCCCccEEeecccccccccccCCCC---ccccCCCCeeEEEEcCccc-CCCCCCeEEEEEeCCCCcccccccccCCCCC
Q 014163 234 ETGWDTPIHVDAASGGFIAPFLYPDL---EWDFRLPLVKSINVSGHKY-GLVYAGVGWVVWRTKDDLPDELVFHINYLGS 309 (429)
Q Consensus 234 ~~~~~~~l~vD~a~~~~~~~~~~~~~---~~~~~~~~~d~~~~s~hK~-~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~ 309 (429)
++++++|++|+.+.. -..+. ...+....-..+..|..|. ++++.++|++++.. +.. +.+.......
T Consensus 181 ----~~~ii~De~y~~~~~--~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~~-~~~-~~l~~~~~~~-- 250 (363)
T PF00155_consen 181 ----NIIIIVDEAYSDLIF--GDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAPP-ELI-ERLRRFQRSG-- 250 (363)
T ss_dssp ----TSEEEEEETTTTGBS--SSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEEH-HHH-HHHHHHHHHT--
T ss_pred ----ccceeeeeceecccc--CCCccCcccccccccccceeeeeccccccccccccccccchh-hhh-hhhhhccccc--
Confidence 999999999987542 11110 1111111124666677784 55778999999843 222 2221111100
Q ss_pred CCCCceeccCCchhHHHHHHHHHHHcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCCCC
Q 014163 310 DQPTFTLNFSKGSSQIIAQYYQFIRLG--FEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHT 387 (429)
Q Consensus 310 ~~~~~~~~~tr~~~~~~~~~~al~~l~--~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~ 387 (429)
.. +......+...+...+ .+.+++..++..++++++.+.|++. ++.+..++ .++++|...+. .+
T Consensus 251 --------~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~--~~~~~~~~~~~--~~ 316 (363)
T PF00155_consen 251 --------LS-SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GITVLPPE--AGFFLWVRLDP--ND 316 (363)
T ss_dssp --------TS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEEHHS--BSSEEEEEESH--HH
T ss_pred --------cc-cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhheeecc--CccEEEEEccc--ch
Confidence 01 1111111222222212 1256788889999999999999988 48887653 56666654321 14
Q ss_pred HHHHHHHHHHHHhcc-CceecccCCCCCCCceEEEEEe
Q 014163 388 VFEISEGLRKKLNRF-QVVYPQKLPMSYPWSTKLRVIS 424 (429)
Q Consensus 388 ~~~~~~~L~~~l~~~-G~~~~~~~~~~~~~~~~lRi~~ 424 (429)
..++.+.|. ++ |+.+.+...+.. ..++|+++
T Consensus 317 ~~~l~~~L~----~~~gi~v~pg~~~~~--~~~iRi~~ 348 (363)
T PF00155_consen 317 AEELAQELL----EEYGILVRPGSYFGV--PGYIRISL 348 (363)
T ss_dssp HHHHHHHHH----HHHTEEEEEGGGGTS--TTEEEEEG
T ss_pred HHHHHHHHH----HhCCEEEEecCCCCC--CCEEEEEe
Confidence 557777777 77 999887622222 55799999
No 179
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.84 E-value=1.3e-18 Score=169.23 Aligned_cols=294 Identities=12% Similarity=0.058 Sum_probs=185.2
Q ss_pred HHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcC
Q 014163 70 PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQG 149 (429)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g 149 (429)
+...+++.+.+..++.. ...+... ++.+++++++|.+. .++|+|||+|+.+++.++.-.
T Consensus 11 ~~e~~a~~~~~~~~~~~-~~g~~~~----~~e~~la~~~g~~~-------~v~~~sgt~aL~~~l~al~~~--------- 69 (376)
T TIGR02379 11 GQELEYIAEAISEGKLS-GDGPFSR----RCETWLENRTGTKK-------ALLTPSCTAALEMAALLLDIQ--------- 69 (376)
T ss_pred HHHHHHHHHHHHcCCcc-CCcHHHH----HHHHHHHHHhCCCe-------EEEeCCHHHHHHHHHHHcCCC---------
Confidence 34466667777654331 1233334 44566888888864 889999999998888765211
Q ss_pred CCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHH
Q 014163 150 KPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLT 229 (429)
Q Consensus 150 ~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~ 229 (429)
.+++|++++++|.+...++...|++++.++++++++.+|+++++++++++|++|+ +++++|...|+++|.++|+
T Consensus 70 ---pGd~Viv~~~t~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~~tk~Ii---p~~~~G~~~d~~~I~~la~ 143 (376)
T TIGR02379 70 ---PGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITHRTKAIV---PVHYAGVACDMDTIMALAN 143 (376)
T ss_pred ---CcCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCcCceEEE---EeCCCCCccCHHHHHHHHH
Confidence 2368999999999999999999999999999876688999999999999999885 5567899999999999999
Q ss_pred HhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCC
Q 014163 230 KKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGS 309 (429)
Q Consensus 230 ~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~ 309 (429)
++ |+++++|+||+.+.. ....... ....+.++++...|.+.++...|++++.+++.. +.+.....+...
T Consensus 144 ~~------~i~vIeDaa~~~g~~--~~~~~~g--~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~-~~~~~~~~~g~~ 212 (376)
T TIGR02379 144 KH------QLFVIEDAAQGVMST--YKGRALG--SIGHLGTFSFHETKNYTSGGEGGALLINDQAFI-ERAEIIREKGTN 212 (376)
T ss_pred HC------CCEEEEECccccCCc--cCCcccC--CCCCEEEEeCCCCCcCcccCCceEEEECCHHHH-HHHHHHHHhCCC
Confidence 99 999999999986432 1111110 112355666666666655434577777655433 222111111000
Q ss_pred -------C--CCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCC---eEEeeCCC----Cc
Q 014163 310 -------D--QPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGR---FEILSKDV----GV 373 (429)
Q Consensus 310 -------~--~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~---~~~~~~~~----~~ 373 (429)
. ...+...|...-..- +.+++-.-..+.+++..++.++++++..+.|+.++. ..+...++ ..
T Consensus 213 ~~~~~~~~~~~~~~~~~g~n~~~~~--~~Aa~g~~qL~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~ 290 (376)
T TIGR02379 213 RSQFFRGEVDKYTWRDIGSSYLPSE--LQAAYLWAQLEQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNA 290 (376)
T ss_pred CccccccCCCcceeeeecccCCccH--HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeee
Confidence 0 000011122211111 112222122255778888888899999999987641 22221111 12
Q ss_pred eEEEEEecCCCCCCHHHHHHHHHHHHhccCceeccc
Q 014163 374 PLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK 409 (429)
Q Consensus 374 ~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~ 409 (429)
..+.+.+.. ..+.+++.+.|. ++||..+.+
T Consensus 291 ~~~~i~~~~--~~~r~~l~~~L~----~~gI~~~~~ 320 (376)
T TIGR02379 291 HMFYIKLKD--EDDRNELIKYLK----EQEIMAVFH 320 (376)
T ss_pred EEEEEEECC--cCCHHHHHHHHH----HCCCCcccc
Confidence 344555532 235677777777 999987644
No 180
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.84 E-value=1.4e-18 Score=169.01 Aligned_cols=308 Identities=14% Similarity=0.105 Sum_probs=194.8
Q ss_pred ccccccccCC-ChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHH
Q 014163 58 LNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (429)
Q Consensus 58 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a 136 (429)
++|....++. +++.+.+++.+.+.. ...|.. +...+++ +.++++++++++ .+++|+|+++++.+++.+
T Consensus 25 i~l~~~~n~~~~~~~~~~a~~~~~~~-~~~Y~~-~~~~~Lr----~aia~~~~v~~~-----~I~it~G~~~~i~~~~~~ 93 (360)
T PRK07392 25 LDFSASINPLGPPESVIAAIQSALSA-LRHYPD-PDYRELR----LALAQHHQLPPE-----WILPGNGAAELLTWAGRE 93 (360)
T ss_pred EEeCCcCCCCCCCHHHHHHHHHHHHH-hhcCCC-cCHHHHH----HHHHHHhCcChh-----hEEECCCHHHHHHHHHHH
Confidence 4455544433 456677776665543 222322 2334444 446666677653 489999999999988776
Q ss_pred HHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCcc----ccCHHHHHHHhhhCCeEEEEeeCC
Q 014163 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYY----VMNPVKAVELVDENTICVAAILGS 212 (429)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~----~~d~~~l~~~i~~~~~~v~~~~~~ 212 (429)
+.. ++.|+++.++|..+...++..|++++.+|++++++ ..|++++++.. .+++++++++|+
T Consensus 94 l~~--------------g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~nP~ 158 (360)
T PRK07392 94 LAQ--------------LRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-TPNDGLLLNNPH 158 (360)
T ss_pred hCC--------------CCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-cCCCEEEEeCCC
Confidence 421 24799999999999999999999999999975322 25677776654 467899999999
Q ss_pred CccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCC-c-cc-c-CCCCeeEEEEcCcccC-CCCCCeEE
Q 014163 213 TLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-E-WD-F-RLPLVKSINVSGHKYG-LVYAGVGW 287 (429)
Q Consensus 213 ~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~-~~-~-~~~~~d~~~~s~hK~~-~~p~g~g~ 287 (429)
||||.+-+.++|.++++++ ++ +++|++|..+.. .... . .. + ..+++-++ .|.-|.+ +++.++||
T Consensus 159 NPTG~~~~~~~l~~l~~~~------~~-~IiDE~y~~~~~---~~~~~s~~~~~~~~~~vi~i-~S~SK~~~l~GlRiG~ 227 (360)
T PRK07392 159 NPTGKLWSREAILPLLEQF------AL-VVVDEAFMDFLP---PDAEQSLIPCLAEYPNLIIL-RSLTKFYSLPGLRLGY 227 (360)
T ss_pred CCCCCCcCHHHHHHHHHHC------CE-EEEECchhhhcc---CccccchHHHhhcCCCEEEE-EechhhhcCCchheee
Confidence 9999999999999999999 85 677999987532 1110 0 00 1 11234333 3555644 59999999
Q ss_pred EEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHH-HHHHHHHHHHHHHHHHHHHhCCCeEE
Q 014163 288 VVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGY-KNIMENCMGNARALREGLEKTGRFEI 366 (429)
Q Consensus 288 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~-~~~~~~~~~~~~~l~~~L~~~~~~~~ 366 (429)
++..+ +.+ +.+.. +.. . .+ ...+.++++...+....+ +...+...++++++.+.|++++++.+
T Consensus 228 ~v~~~-~~~-~~~~~---~~~----~----~~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~ 291 (360)
T PRK07392 228 AIAHP-DRL-QRWQQ---WRD----P----WP---VNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLASLPGLTP 291 (360)
T ss_pred eeCCH-HHH-HHHHh---hCC----C----CC---CCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCcEE
Confidence 88643 222 22211 110 0 11 233455555555543333 33445677788999999998877776
Q ss_pred eeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 367 LSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 367 ~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
. ++ ..+++.++.. .+..++.+.|. .++|+.+.+.......+..++||+++.+
T Consensus 292 ~-~~-~~~fl~~~~~----~~~~~l~~~ll---~~~gv~v~pg~~f~~~~~~~iRi~~~~~ 343 (360)
T PRK07392 292 L-PS-AANFLLVQSQ----GSALQLQEKLL---QQHRILIRDCLSFPELGDRYFRVAVRTE 343 (360)
T ss_pred C-CC-CCCEEEEEcC----CCHHHHHHHHH---hhCCEEEEeCCCCCCCCCCEEEEEeCCH
Confidence 4 22 4445544442 14566766643 1679998866222222456899999864
No 181
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.84 E-value=2.5e-18 Score=181.38 Aligned_cols=337 Identities=12% Similarity=0.066 Sum_probs=219.5
Q ss_pred CCCC--CCCCCHHHHHHHHHHhhccCC-CCCccccccc-cCCChHHHHHHHHHHcC--cC--CCCCccChhhHHHHHHHH
Q 014163 30 FKMP--DNSMPKEAAYQVINDELMLDG-NPRLNLASFV-TTWMEPECDKLVMASIN--KN--YVDMDEYPVTTELQNRCV 101 (429)
Q Consensus 30 ~~~p--~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~le~~~~ 101 (429)
..+| ..+.++.++++++.+....+. +..| .+.+. +...++.+.+.+.+... +. ++..+.+++..+.-.+.+
T Consensus 76 l~lp~~~~~~sE~e~~~~~~~la~kN~~~~~f-iG~G~y~~~~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Q 154 (993)
T PLN02414 76 MKLSKYDEGLTESQMLEHMKSLASKNKVFKSY-IGMGYYNTHVPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQ 154 (993)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHhcCCccccc-cCCCCCCccCCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHH
Confidence 3566 256799999999988765543 3333 23232 33344555465554332 22 223344567667777899
Q ss_pred HHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHH----HHHHHhcCce
Q 014163 102 NMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCW----EKFARYFEVE 177 (429)
Q Consensus 102 ~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~----~~~~~~~G~~ 177 (429)
.++++|+|++.. ...++.++|.+...++++.+.. +| ++++|++++..|++. ...++..|++
T Consensus 155 t~ia~LtG~~~a-----naSL~d~aTAaaea~~~a~~~~-------~g---~~~~VlVs~~~hP~~~~v~~t~a~~~Gie 219 (993)
T PLN02414 155 TMITDLTGLPMS-----NASLLDEGTAAAEAMAMCNNIL-------KG---KKKKFLIASNCHPQTIDVCQTRADGLGLE 219 (993)
T ss_pred HHHHHHhCCChh-----hEeecCChHHHHHHHHHHHhcc-------cC---CCCEEEEcCccCHhHHHHHHHhhhhcCCE
Confidence 999999999863 4788889998888666654321 11 236899999999974 4455667999
Q ss_pred eEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCC
Q 014163 178 LKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYP 257 (429)
Q Consensus 178 v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~ 257 (429)
++.+|++.. + ...+.+.. ++++-.+.+|.+.|+++|+++||++ |++++| +|+..+...+.
T Consensus 220 V~~v~~~~~----~------~~~~~v~~-vlvq~P~~~G~v~dv~~I~~~ah~~------GaL~iV-aad~lal~~l~-- 279 (993)
T PLN02414 220 VVVADEKDF----D------YSSGDVCG-VLVQYPATDGEVLDYAEFVKNAHAN------GVKVVM-ATDLLALTMLK-- 279 (993)
T ss_pred EEEecchhh----c------cccCceEE-EEEecCCCCeEEcCHHHHHHHHHHc------CCEEEE-EECHHHhcCCC--
Confidence 999987531 1 11223333 3466667789999999999999999 999999 77754332111
Q ss_pred CCccccCCCCeeEEEEcCcccCCCCCC-----eEEEEEeCCCCcccccc-cccCCCCCCC--CCce---------e---c
Q 014163 258 DLEWDFRLPLVKSINVSGHKYGLVYAG-----VGWVVWRTKDDLPDELV-FHINYLGSDQ--PTFT---------L---N 317 (429)
Q Consensus 258 ~~~~~~~~~~~d~~~~s~hK~~~~p~g-----~g~l~~~~~~~~~~~~~-~~~~~~~~~~--~~~~---------~---~ 317 (429)
+.+..++|+++.++|||+ .|.| .|+++++++. .+.+. ....+..... ..+. + .
T Consensus 280 ----~pge~GADi~vgsgqKwg-~P~G~GGP~aGflavr~~~--~r~~PgriVG~s~d~~g~~~~~l~LqtReqhiRrEk 352 (993)
T PLN02414 280 ----PPGEWGADIVVGSAQRFG-VPMGYGGPHAAFLATSQEY--KRLMPGRIIGVSVDSSGKPALRMAMQTREQHIRRDK 352 (993)
T ss_pred ----CHhhccCcEEEECCCccc-cCCCCCCCCeeEEEECHHH--HhhCCCcccCcccCCCCCcccccccccccchhhhcc
Confidence 122347999999999998 4444 7999997642 22221 1112211000 0000 0 2
Q ss_pred cCCchhHHHHHHHHH-----HHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHH
Q 014163 318 FSKGSSQIIAQYYQF-----IRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEIS 392 (429)
Q Consensus 318 ~tr~~~~~~~~~~al-----~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~ 392 (429)
+|.+.....++++++ .++|..|++++.+++..++.++.+.|++.+ +++..++ .+++++|++. +..++.
T Consensus 353 aTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~G-~~~~~~~-~f~~vt~~~~-----~~~~v~ 425 (993)
T PLN02414 353 ATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKLG-FQVQSLP-FFDTVKVKCS-----DADAIA 425 (993)
T ss_pred cccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhcC-CccCCCC-CcCeEEEecC-----CHHHHH
Confidence 566655555555555 345789999999999999999999998865 8887664 6788999863 235677
Q ss_pred HHHHHHHhccCceecccCCCCCCCceEEEEEecc
Q 014163 393 EGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHL 426 (429)
Q Consensus 393 ~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~ 426 (429)
++|. ++||.++... ...+|+|++-
T Consensus 426 ~~L~----~~gI~l~~~~------~~~lrvs~~e 449 (993)
T PLN02414 426 DAAA----KVGINLRVVD------ANTVTVSFDE 449 (993)
T ss_pred HHHH----HCCCeeEEec------CCeEEEEeec
Confidence 7777 9999876431 2248999863
No 182
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.84 E-value=1.3e-18 Score=170.25 Aligned_cols=229 Identities=20% Similarity=0.106 Sum_probs=163.1
Q ss_pred HHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchH----HHHHHHhc
Q 014163 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYF 174 (429)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s----~~~~~~~~ 174 (429)
++.+.+++++|.+. .++++||++|+..++.++.. .+++|++++..|.+ +...+...
T Consensus 65 ~le~~la~l~g~~~-------~v~~ssG~~Ai~~al~al~~-------------~Gd~Vi~~~~~y~~t~~~~~~~~~~~ 124 (390)
T PRK08133 65 MFQERLAALEGAEA-------CVATASGMAAILAVVMALLQ-------------AGDHVVSSRSLFGSTVSLFEKIFARF 124 (390)
T ss_pred HHHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHHhC-------------CCCEEEEccCcchhHHHHHHHHHHHc
Confidence 45556899999864 78899999999988887643 13689999988865 33456678
Q ss_pred CceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccc
Q 014163 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (429)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (429)
|++++.++++ |+++++++++++|++|++++++||+|.+.|+++|+++|+++ |+++++|++++.+..
T Consensus 125 G~~v~~vd~~------d~~~l~~~i~~~tklV~ie~p~NptG~v~dl~~I~~la~~~------gi~livD~t~~~~~~-- 190 (390)
T PRK08133 125 GIETTFVDLT------DLDAWRAAVRPNTKLFFLETPSNPLTELADIAALAEIAHAA------GALLVVDNCFCTPAL-- 190 (390)
T ss_pred CcEEEEECCC------CHHHHHHhcCcCCeEEEEECCCCCCCCcCCHHHHHHHHHHc------CCEEEEECCCccccc--
Confidence 9999888753 68899999999999999999999999999999999999999 999999999865321
Q ss_pred cCCCCccccCCCCeeEEEEcCcccCCCCC-CeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHH
Q 014163 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYA-GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFI 333 (429)
Q Consensus 255 ~~~~~~~~~~~~~~d~~~~s~hK~~~~p~-g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~ 333 (429)
.. +.. .++|.++.|.+|+++++. ..|.+++.+++.+ ..+....... |.. .....+|.+++
T Consensus 191 ~~---pl~---~g~Divv~S~sK~~~g~g~~~GG~vv~~~~~~-~~~~~~~~~~----------g~~--~~~~~a~~~l~ 251 (390)
T PRK08133 191 QQ---PLK---LGADVVIHSATKYLDGQGRVLGGAVVGSKELM-EEVFGFLRTA----------GPT--LSPFNAWVFLK 251 (390)
T ss_pred CC---chh---hCCcEEEeecceeecCCcceEeEEEEcCHHHH-HHHHHHHHHh----------CCC--CCHHHHHHHHc
Confidence 11 111 257999999999986653 3444444333222 1111110101 111 22334555553
Q ss_pred HcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC----------------CceEEEEEecC
Q 014163 334 RLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV----------------GVPLVAFSLKD 382 (429)
Q Consensus 334 ~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----------------~~~~v~f~~~~ 382 (429)
+.+.+..++++..+++.++.+.|++.|+++.+..|. ..++++|.+++
T Consensus 252 --gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~ 314 (390)
T PRK08133 252 --GLETLSLRMEAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKG 314 (390)
T ss_pred --ccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcC
Confidence 345688888999999999999999998876544331 24689999863
No 183
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.84 E-value=1e-18 Score=170.93 Aligned_cols=255 Identities=14% Similarity=0.103 Sum_probs=170.8
Q ss_pred cChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHH
Q 014163 89 EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE 168 (429)
Q Consensus 89 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~ 168 (429)
..|...+||+. +++++|.+. .+++++|+.|+..++.++.. .+++|+++.+.|....
T Consensus 59 ~~pt~~~Le~~----lA~l~G~~~-------al~~~sG~~Ai~~~l~al~~-------------~Gd~Vv~~~~~y~~~~ 114 (386)
T PRK06767 59 GNPTVKLFEER----MAVLEGGEE-------ALAFGSGMAAISATLIGFLK-------------AGDHIICSNGLYGCTY 114 (386)
T ss_pred CCcchHHHHHH----HHHHhCCCc-------EEEECCHHHHHHHHHHHHhC-------------CCCEEEEcCCcHHHHH
Confidence 34555666644 889999753 67777888898887777653 2368999998887543
Q ss_pred HH----HHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEee
Q 014163 169 KF----ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVD 244 (429)
Q Consensus 169 ~~----~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD 244 (429)
.. +...|+++..++. .|+++++++++++|++|++++++||+|.+.|+++|.++|+++ |+++++|
T Consensus 115 ~~~~~~~~~~gi~~~~~~~------~d~~~l~~~i~~~tklV~lesp~NptG~v~dl~~I~~la~~~------g~~vivD 182 (386)
T PRK06767 115 GFLEVLEEKFMITHSFCDM------ETEADIENKIRPNTKLIFVETPINPTMKLIDLKQVIRVAKRN------GLLVIVD 182 (386)
T ss_pred HHHHHHHhhcCeEEEEeCC------CCHHHHHHhhCcCceEEEEeCCCCCCceecCHHHHHHHHHHc------CCEEEEE
Confidence 33 3445665555532 478999999999999999999999999999999999999999 9999999
Q ss_pred cccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCC--eEEEEEeCCCCcccccccccCCCCCCCCCceeccCCch
Q 014163 245 AASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGS 322 (429)
Q Consensus 245 ~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~ 322 (429)
++|+.+.. .. +.. .++|+++.|.+|++.++.. .|+++.+++ .+...........+ +.
T Consensus 183 ~a~a~~~~---~~--pl~---~g~Div~~S~sK~l~g~g~~~gG~v~~~~~-~i~~~~~~~~~~~g----------~~-- 241 (386)
T PRK06767 183 NTFCSPYL---QR--PLE---LGCDAVVHSATKYIGGHGDVVAGVTICKTR-ALAEKIRPMRKDIG----------GI-- 241 (386)
T ss_pred CCCccccc---CC--chh---cCCcEEEecCcceecCCCCceeEEEEeChH-HHHHHHHHHHHHhC----------CC--
Confidence 99974321 11 111 3689999999999876543 477766542 22111111111111 11
Q ss_pred hHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC----------CceEEEEEecCCCCCCHHHHH
Q 014163 323 SQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV----------GVPLVAFSLKDSSAHTVFEIS 392 (429)
Q Consensus 323 ~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----------~~~~v~f~~~~~~~~~~~~~~ 392 (429)
.....+|..+..+ +.+..++++..+++.++.+.|+++|+++.+..|. ..++++|.+++. ..+...+.
T Consensus 242 ~~~~~a~l~~~~L--~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~-~~~~~~f~ 318 (386)
T PRK06767 242 MAPFDAWLLLRGL--KTLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGG-KEETQAFI 318 (386)
T ss_pred CCHHHHHHHHcCC--CcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCC-HHHHHHHH
Confidence 1223345555444 3456788899999999999999999888654221 357999998632 12334444
Q ss_pred HHHHHHHhccCceec
Q 014163 393 EGLRKKLNRFQVVYP 407 (429)
Q Consensus 393 ~~L~~~l~~~G~~~~ 407 (429)
++|. ..++.++
T Consensus 319 ~~l~----~~~~~~s 329 (386)
T PRK06767 319 NDLH----FITIAVS 329 (386)
T ss_pred HhCC----ccEEecC
Confidence 4444 6665443
No 184
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.84 E-value=1.2e-18 Score=172.26 Aligned_cols=284 Identities=12% Similarity=-0.024 Sum_probs=184.0
Q ss_pred ChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHH
Q 014163 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (429)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~ 169 (429)
++...++|++ +++++|.+. .+++++||+|+.+++.++......+. +. ..+++|+++.++|.++..
T Consensus 62 G~~~~~fe~~----lA~~~g~~~-------~v~~~sGt~al~~aL~al~~~~~~~~---~~-~pGd~VIv~~~t~~a~~~ 126 (438)
T PRK15407 62 GRFNDAFEKK----LAEFLGVRY-------ALLVNSGSSANLLAFSALTSPKLGDR---AL-KPGDEVITVAAGFPTTVN 126 (438)
T ss_pred ChhHHHHHHH----HHHHhCCCe-------EEEECCHHHHHHHHHHHHhhcccccc---CC-CCCCEEEECCCCcHHHHH
Confidence 4445555544 888888864 78999999999999987643211000 00 023689999999999999
Q ss_pred HHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeeccccc
Q 014163 170 FARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (429)
Q Consensus 170 ~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~ 249 (429)
++...|++++.++++.+++.+|+++++++++++|++|+++++ .|...++++|.++|+++ +++|++|++|+.
T Consensus 127 ~v~~~G~~pv~vdvd~~~~~id~~~le~~i~~~tkaVi~~~~---~G~p~dl~~I~~la~~~------gi~vIeDaa~a~ 197 (438)
T PRK15407 127 PIIQNGLVPVFVDVELPTYNIDASLLEAAVSPKTKAIMIAHT---LGNPFDLAAVKAFCDKH------NLWLIEDNCDAL 197 (438)
T ss_pred HHHHcCCEEEEEecCCCcCCcCHHHHHHHcCcCCeEEEEeCC---CCChhhHHHHHHHHHHC------CCEEEEECccch
Confidence 999999999999998656889999999999999999888774 67788999999999999 999999999986
Q ss_pred ccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCC-------------------
Q 014163 250 FIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSD------------------- 310 (429)
Q Consensus 250 ~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~------------------- 310 (429)
+.. .....-.. ...+-++++...|.+.++.| |++++++++.. +.+.....+-...
T Consensus 198 G~~--~~g~~~G~--~gd~~~fSf~~~k~~~~geG-G~l~t~d~~l~-~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~ 271 (438)
T PRK15407 198 GST--YDGRMTGT--FGDIATLSFYPAHHITMGEG-GAVFTNDPLLK-KIIESFRDWGRDCWCAPGCDNTCGKRFGWQLG 271 (438)
T ss_pred hhh--cCCeeeec--cCceEEEeCCCCCCccccCc-eEEEECCHHHH-HHHHHHHHhCcccccccccccccccccccccc
Confidence 543 22111111 22355666666676666555 77777665432 2211111111000
Q ss_pred ------CCCc--eeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCC-eEEeeCCC-C-c--eEEE
Q 014163 311 ------QPTF--TLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGR-FEILSKDV-G-V--PLVA 377 (429)
Q Consensus 311 ------~~~~--~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~~~-~-~--~~v~ 377 (429)
...+ ...|.. ..+-.+.+++.....+.+++++++.+++++++.+.|+++++ +.+...++ . . ..+.
T Consensus 272 ~~~~~~~~~~~~~~~G~n--~rmsel~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 349 (438)
T PRK15407 272 ELPFGYDHKYTYSHLGYN--LKITDMQAAIGLAQLEKLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFP 349 (438)
T ss_pred cccccccccccccccccc--cCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEE
Confidence 0000 001211 11222334443333466788999999999999999998864 32222121 1 1 2445
Q ss_pred EEecCCCCCCHHHHHHHHHHHHhccCceeccc
Q 014163 378 FSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK 409 (429)
Q Consensus 378 f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~ 409 (429)
+.+.+..+.+.+++.+.|. ++||..+.+
T Consensus 350 i~~~~~~~~~Rd~l~~~L~----~~GI~~~~~ 377 (438)
T PRK15407 350 ITVKEDAGFTRVELVKYLE----ENKIGTRLL 377 (438)
T ss_pred EEECCcCCCCHHHHHHHHH----HCCCCcccc
Confidence 5554322356778888887 999977654
No 185
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.84 E-value=7.5e-19 Score=170.57 Aligned_cols=232 Identities=17% Similarity=0.085 Sum_probs=165.3
Q ss_pred ChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHH
Q 014163 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (429)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~ 169 (429)
.|....||+. ++++.|... ..+++||++|+..++.++.+ .+++|+++++.|..+..
T Consensus 60 npt~~~Le~~----iA~le~~~~-------~~~~~sG~~Ai~~~l~all~-------------~GD~Vvv~~~~Y~~t~~ 115 (394)
T PRK09028 60 TPTHFAFQAA----IVELEGGAG-------TALYPSGAAAISNALLSFLK-------------AGDHLLMVDSCYEPTRD 115 (394)
T ss_pred CchHHHHHHH----HHHHhCCCc-------EEEECCHHHHHHHHHHHHhC-------------CCCEEEEECCCcHHHHH
Confidence 4555566655 677776642 78999999999998887754 23689999998876554
Q ss_pred H----HHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeec
Q 014163 170 F----ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (429)
Q Consensus 170 ~----~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~ 245 (429)
. +...|+++..++.+ |.+.++++++++|++|++++|+||+|.+.|+++|+++|+++ |++++||+
T Consensus 116 l~~~~l~~~Gi~v~~v~~~------~~e~l~~~l~~~TklV~lespsNPtg~v~dl~~I~~la~~~------g~~lvvD~ 183 (394)
T PRK09028 116 LCDKILKGFGIETTYYDPM------IGEGIRELIRPNTKVLFLESPGSITMEVQDVPTLSRIAHEH------DIVVMLDN 183 (394)
T ss_pred HHHHhhhhcceEEEEECCC------CHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHc------CCEEEEEC
Confidence 3 34578888776532 45789999999999999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCe--EEEEEeCCCCcccccccccCCCCCCCCCceeccCCchh
Q 014163 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGV--GWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSS 323 (429)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~--g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~ 323 (429)
+|+.+.. .. +.+ .++|++..|+|||++++.++ |++ +.+++.. +.+....... |.- .
T Consensus 184 t~a~p~~--~~---Pl~---~GaDivv~S~tK~l~Gh~d~~~G~~-~~~~~~~-~~l~~~~~~~----------G~~--~ 241 (394)
T PRK09028 184 TWASPIN--SR---PFE---MGVDISIQAATKYIVGHSDVMLGTA-TANEKHW-DQLREHSYLM----------GQC--T 241 (394)
T ss_pred Ccccccc--CC---ccc---cCceEEEEeCCeEecCCCCEEEEEE-ECCHHHH-HHHHHHHHhc----------CCC--C
Confidence 9986431 11 112 37999999999999988653 544 4443221 1111111111 111 2
Q ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeE-EeeCC---------------CCceEEEEEec
Q 014163 324 QIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKD---------------VGVPLVAFSLK 381 (429)
Q Consensus 324 ~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~ 381 (429)
.....|..++ |...+.-+++++.+++..+.+.|++.|.++ +..|. ...++++|.++
T Consensus 242 ~p~~a~l~~r--gl~TL~lR~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~ 313 (394)
T PRK09028 242 SPDDVYLAMR--GLRTLGVRLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLK 313 (394)
T ss_pred CHHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEEC
Confidence 3344555543 445688899999999999999999999875 43331 02469999986
No 186
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.84 E-value=4.9e-19 Score=173.11 Aligned_cols=253 Identities=14% Similarity=0.086 Sum_probs=175.9
Q ss_pred hhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHH--
Q 014163 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE-- 168 (429)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~-- 168 (429)
|...+|| +.++++.|.+. +.+++||++|+.+++.++.. .+++|+++++.|..+.
T Consensus 65 pt~~~Le----~~lA~l~g~~~-------~l~~~sgt~Ai~~~l~al~~-------------~GD~Vl~~~~~y~~~~~~ 120 (394)
T PRK07050 65 PTSLALA----QRLAEIEGGRH-------ALLQPSGLAAISLVYFGLVK-------------AGDDVLIPDNAYGPNRDH 120 (394)
T ss_pred HHHHHHH----HHHHHHhCCCe-------EEEeccHHHHHHHHHHHHhC-------------CCCEEEEecCCcccHHHH
Confidence 4445555 45889899753 88999999999999988754 2368999999998644
Q ss_pred --HHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecc
Q 014163 169 --KFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (429)
Q Consensus 169 --~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a 246 (429)
..+...|++++.++.. +.++++++++++|++|++++|+|++|.+.++++|+++|+++ |+++++|++
T Consensus 121 ~~~~~~~~Gi~v~~vd~~------~~~~l~~~i~~~tklV~le~p~Np~~~~~di~~I~~ia~~~------gi~livD~a 188 (394)
T PRK07050 121 GEWLARDFGITVRFYDPL------IGAGIADLIQPNTRLIWLEAPGSVTMEVPDVPAITAAARAR------GVVTAIDNT 188 (394)
T ss_pred HHHHHHhcCeEEEEECCC------CHHHHHHhcCCCCeEEEEECCCCCCccHhhHHHHHHHHHHc------CCEEEEECC
Confidence 4567789998888642 34688999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCCccccCCCCeeEEEEcCcccCCCCCC--eEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhH
Q 014163 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQ 324 (429)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~ 324 (429)
|+.+.. ..+ .. .++|+++.|.+|++.++.+ .|++++++++ +.+.+.....+.+. + ..
T Consensus 189 ~a~~~~--~~~---l~---~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~-~~~~~~~~~~~~G~---------~---~~ 247 (394)
T PRK07050 189 YSAGLA--FKP---FE---HGVDISVQALTKYQSGGSDVLMGATITADAE-LHAKLKLARMRLGI---------G---VS 247 (394)
T ss_pred cccccc--cCH---HH---cCCeEEEEECCceecCCCCeeEEEEEECCHH-HHHHHHHHHHhcCC---------C---CC
Confidence 976432 111 11 2589999999999987766 4666665543 22222222222221 1 12
Q ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC----------------CceEEEEEecCC-CCCC
Q 014163 325 IIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV----------------GVPLVAFSLKDS-SAHT 387 (429)
Q Consensus 325 ~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----------------~~~~v~f~~~~~-~~~~ 387 (429)
....|.+++. .+.+..++++..+++.++.+.|++.|.+..+..|. ..++++|.+.+. ...+
T Consensus 248 ~~~a~l~lr~--l~tl~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~ 325 (394)
T PRK07050 248 ADDCSLVLRG--LPSLQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQ 325 (394)
T ss_pred HHHHHHHHcC--CCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHH
Confidence 3344555543 34567788889999999999999998776444221 245888888642 1123
Q ss_pred HHHHHHHHHHHHhccCcee
Q 014163 388 VFEISEGLRKKLNRFQVVY 406 (429)
Q Consensus 388 ~~~~~~~L~~~l~~~G~~~ 406 (429)
.+++. ++|...++..
T Consensus 326 ~~~~~----~~l~~~~~~~ 340 (394)
T PRK07050 326 VDAFV----EALELFAIGW 340 (394)
T ss_pred HHHHH----HcCCCCeecc
Confidence 33444 4444666433
No 187
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.84 E-value=3e-18 Score=170.61 Aligned_cols=323 Identities=14% Similarity=0.008 Sum_probs=213.6
Q ss_pred ccccccccCC---ChHHHHHHHHHHcCc---C-CCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHH
Q 014163 58 LNLASFVTTW---MEPECDKLVMASINK---N-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAI 130 (429)
Q Consensus 58 ~~~~~~~~~~---~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~ 130 (429)
+.|..+.|.+ +.....+.+...+.. . ...|....+..++++.+.+++....|...+.+ .+++|+|+++|+
T Consensus 92 i~f~~g~p~~~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~---~IiiT~G~q~al 168 (459)
T COG1167 92 IDFAGGLPDPSLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPE---QIVITSGAQQAL 168 (459)
T ss_pred ecCCCCCCCcccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcC---eEEEeCCHHHHH
Confidence 3344444433 334466666655533 2 23455557999999999999997788876532 499999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhh-CCeEEE-E
Q 014163 131 MLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVA-A 208 (429)
Q Consensus 131 ~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~-~ 208 (429)
.+++..+.+ .++.|++.+++|+....+.+.+|+++..||+|++ .+|+++|++.+.. ++++++ +
T Consensus 169 ~l~~~~l~~-------------pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~~--G~~~e~le~~~~~~~~k~~y~~ 233 (459)
T COG1167 169 DLLLRLLLD-------------PGDTVLVEDPTYPGALQALEALGARVIPVPVDED--GIDPEALEEALAQWKPKAVYVT 233 (459)
T ss_pred HHHHHHhCC-------------CCCEEEEcCCCcHHHHHHHHHcCCcEEecCCCCC--CCCHHHHHHHHhhcCCcEEEEC
Confidence 988888765 2379999999999999999999999999999865 4999999999987 455554 3
Q ss_pred eeCCCccccccCh---HHHHHHHHHhhhccCCCccEEeecccccccccccCCCCc--cccCCCCeeEEEEcCcccCCCCC
Q 014163 209 ILGSTLTGEFEDV---KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE--WDFRLPLVKSINVSGHKYGLVYA 283 (429)
Q Consensus 209 ~~~~~~tG~~~~l---~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~~~~~~d~~~~s~hK~~~~p~ 283 (429)
-..+||||...+. ++|.++|++| ++|++.|..|+.+.. ...... ..+...+=..+..|.-|.+.++.
T Consensus 234 P~~qNPtG~tms~~rR~~Ll~lA~~~------~~~IIEDD~y~el~~--~~~p~~~l~~ld~~~rViy~gSFSK~l~Pgl 305 (459)
T COG1167 234 PTFQNPTGVTMSLERRKALLALAEKY------DVLIIEDDYYGELRY--DGPPPPPLKALDAPGRVIYLGSFSKTLAPGL 305 (459)
T ss_pred CCCCCCCCCccCHHHHHHHHHHHHHc------CCeEEeeCcchhhhc--CCCCCCChHhhCCCCCEEEEeeehhhccccc
Confidence 4557899998654 6899999999 999999999987432 211111 11122233445557779999999
Q ss_pred CeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHc--C--HHHHHHHHHHHHHHHHHHHHHHH
Q 014163 284 GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL--G--FEGYKNIMENCMGNARALREGLE 359 (429)
Q Consensus 284 g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l--~--~~g~~~~~~~~~~~~~~l~~~L~ 359 (429)
++||++... .+.+.+......... ++ ..+.+.+....+ | ..-++++.+...++++.+.+.|.
T Consensus 306 RlG~vv~p~--~~~~~~~~~k~~~~~--------~~----s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~ 371 (459)
T COG1167 306 RLGYVVAPP--ELIEKLLRLKQAADL--------GP----SSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALA 371 (459)
T ss_pred ceeeeeCCH--HHHHHHHHHHHHhcC--------CC----ChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998743 221221111111110 11 112222222222 2 23345556666778999999999
Q ss_pred hCCC-eEEeeCCCCceEEEE-EecCCCCCCHHHHHHHHHHHHhccCceecc-c--CCCCCCCceEEEEEeccc
Q 014163 360 KTGR-FEILSKDVGVPLVAF-SLKDSSAHTVFEISEGLRKKLNRFQVVYPQ-K--LPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 360 ~~~~-~~~~~~~~~~~~v~f-~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~-~--~~~~~~~~~~lRi~~~~~ 427 (429)
+..+ ...+..+ ..+++.| ++++ +.+..++.+... ++|+.+.. . +........++|++++..
T Consensus 372 ~~~~~~~~~~~p-~gG~flwl~l~~--~~~~~~l~~~a~----~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~ 437 (459)
T COG1167 372 EYLPELATWTRP-EGGLFLWLELPE--GIDARELLAAAL----EKGVVVTPLGSAFSADGDPRNGLRLSFSSP 437 (459)
T ss_pred HhCCCCeeeecC-CceEEEEEEcCC--CCCHHHHHHHHH----HCCCEEEcCCccccCCCCCCCeEEEEcCCC
Confidence 8743 3334444 3455444 4432 577788888888 89988876 3 333223456899999764
No 188
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.84 E-value=1.2e-18 Score=173.48 Aligned_cols=217 Identities=10% Similarity=0.007 Sum_probs=142.0
Q ss_pred ccccccccCCChHHHHHHHHHH-cCcCCCCCcc-ChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHH
Q 014163 58 LNLASFVTTWMEPECDKLVMAS-INKNYVDMDE-YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGL 135 (429)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~ 135 (429)
++++.+.|+++++.+.+.+... ++. +|.. .......|..+..++.+.++......+...+++|+|+++|+.+++.
T Consensus 97 i~l~~g~p~~~~~~~~~~~~~~~~~~---~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~ 173 (521)
T TIGR03801 97 ISYVIDQLGFDPDAFLYEMCDGIIGD---NYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFD 173 (521)
T ss_pred HhhcCCCCCCCCCHHHHHHHHHhhcC---CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHH
Confidence 4566677776655544444444 333 2432 3344444544446777665543222111248899999999999887
Q ss_pred HHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhc--CceeEEEeccC-Cc-----cccCHHHHHHHhhhCCeEEE
Q 014163 136 AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYF--EVELKEVKLEE-GY-----YVMNPVKAVELVDENTICVA 207 (429)
Q Consensus 136 a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~--G~~v~~v~~~~-~~-----~~~d~~~l~~~i~~~~~~v~ 207 (429)
++...... ..+++|+++.++|..+...++.. |++++.+++++ +. |.+|+++|++++++++++|+
T Consensus 174 ~l~~~~ll--------~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~kai~ 245 (521)
T TIGR03801 174 SLKANELL--------KKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDPSIKALF 245 (521)
T ss_pred HHhHhhcC--------CCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeecccccccccccCCCCHHHHHHhcCCCCcEEE
Confidence 74321110 02368999999999999988876 56666677653 22 88999999999988999999
Q ss_pred EeeCCCccccccC---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCC
Q 014163 208 AILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG 284 (429)
Q Consensus 208 ~~~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g 284 (429)
+++|+||||.+-+ +++|+++|++|+ .++++++|++|+.+...+.. . ....-+++-.+...++.+++++++
T Consensus 246 l~nP~NPTG~vls~e~l~~I~~ia~~~~----~~l~II~DEvY~~f~~~~~s--l-~~~~~~~vI~v~SfSK~fg~~G~R 318 (521)
T TIGR03801 246 VVNPSNPPSVAMSDESIEKIVDIVANDR----PDLMILTDDVYGTFVDDFRS--L-FAELPYNTIGVYSFSKYFGATGWR 318 (521)
T ss_pred EeCCCCCCCCCCCHHHHHHHHHHHHhcC----CCeEEEECCCchhhcccccc--h-hhhCCCCEEEEEcchhhccCchhh
Confidence 9999999999955 777888898751 18999999999875321110 0 001112344444444446689999
Q ss_pred eEEEEEeC
Q 014163 285 VGWVVWRT 292 (429)
Q Consensus 285 ~g~l~~~~ 292 (429)
+||++..+
T Consensus 319 lG~i~~~~ 326 (521)
T TIGR03801 319 LGTIALHK 326 (521)
T ss_pred hhhhhcCc
Confidence 99998754
No 189
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.83 E-value=1.5e-18 Score=169.61 Aligned_cols=233 Identities=17% Similarity=0.063 Sum_probs=164.5
Q ss_pred hhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHH
Q 014163 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF 170 (429)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~ 170 (429)
|...++|+ .++++.|.+. .+.+++|++|+.+++.++.. .+++|+++.+.|.+....
T Consensus 61 p~~~~Le~----~lA~~~g~~~-------~i~~~sG~~Ai~~~l~all~-------------~Gd~Vl~~~~~y~~t~~~ 116 (388)
T PRK07811 61 PTRTALEE----QLAALEGGAY-------GRAFSSGMAATDCLLRAVLR-------------PGDHIVIPNDAYGGTFRL 116 (388)
T ss_pred ccHHHHHH----HHHHHhCCCc-------eEEeCCHHHHHHHHHHHHhC-------------CCCEEEEcCCCchHHHHH
Confidence 55556654 4888899875 55667789999999888754 236899999998854332
Q ss_pred ----HHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecc
Q 014163 171 ----ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (429)
Q Consensus 171 ----~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a 246 (429)
+...|++++.++. .|+++++++++++|++|++++++||+|.+.|+++|+++|+++ ++++++|++
T Consensus 117 ~~~~~~~~gi~~~~~d~------~d~e~l~~~i~~~tklV~ie~p~NPtg~~~dl~~I~~la~~~------gi~lIvD~a 184 (388)
T PRK07811 117 IDKVFTRWGVEYTPVDL------SDLDAVRAAITPRTKLIWVETPTNPLLSITDIAALAELAHDA------GAKVVVDNT 184 (388)
T ss_pred HHHhCcCCCeEEEEeCC------CCHHHHHHhcCcCCeEEEEECCCCCcceecCHHHHHHHHHHc------CCEEEEECC
Confidence 2335777766653 489999999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCCccccCCCCeeEEEEcCcccCCCCCC--eEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhH
Q 014163 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQ 324 (429)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~ 324 (429)
|+.+.. .. +. . .++|+++.|.+|++++|.+ .|++++++++ +...+.....+.+. . ..
T Consensus 185 ~a~~~~---~~--p~--~-~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~-l~~~~~~~~~~~g~----------~--~s 243 (388)
T PRK07811 185 FASPYL---QQ--PL--A-LGADVVVHSTTKYIGGHSDVVGGALVTNDEE-LDEAFAFLQNGAGA----------V--PG 243 (388)
T ss_pred CCcccc---CC--ch--h-hCCcEEEecCceeecCCCCcEEEEEEECCHH-HHHHHHHHHHhcCC----------C--CC
Confidence 975432 11 11 1 2689999999999987654 5777766543 22221111111111 1 12
Q ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC----------------CceEEEEEecC
Q 014163 325 IIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV----------------GVPLVAFSLKD 382 (429)
Q Consensus 325 ~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----------------~~~~v~f~~~~ 382 (429)
....|.+++.+ +.+..++++..+++..+.+.|++.|.++-+.-|. ..++++|.+++
T Consensus 244 ~~~a~l~~~~L--~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~ 315 (388)
T PRK07811 244 PFDAYLTLRGL--KTLAVRMDRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAG 315 (388)
T ss_pred HHHHHHHHhcc--CcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCC
Confidence 22345444443 3467888888999999999999999876443331 14589999864
No 190
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.83 E-value=8.6e-19 Score=170.73 Aligned_cols=248 Identities=13% Similarity=0.089 Sum_probs=169.9
Q ss_pred HHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHH----HHHh
Q 014163 98 NRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK----FARY 173 (429)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~----~~~~ 173 (429)
+++.+.+++++|.+. .+++++|+.|+..++. +.. .+++|+++++.|.++.. .+..
T Consensus 50 ~~le~~la~l~g~~~-------~l~~~sG~~al~~~l~-ll~-------------~Gd~Vl~~~~~y~~~~~~~~~~~~~ 108 (378)
T TIGR01329 50 TALESLLAKLDKADR-------AFAFSSGMAALDVITR-LLN-------------NGDEIIAGDDLYGGTDRLLTQVVPR 108 (378)
T ss_pred HHHHHHHHHHhCCCc-------EEEECCHHHHHHHHHH-HhC-------------CCCEEEEcCCCchHHHHHHHHHHHH
Confidence 355566899999853 6677777878765543 322 23689999988886543 4566
Q ss_pred cCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeeccccccccc
Q 014163 174 FEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAP 253 (429)
Q Consensus 174 ~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~ 253 (429)
.|++++.+++ .|+++++++++++|++|++++++|++|.+.|+++|+++|+++ |++++||++++.+.
T Consensus 109 ~G~~v~~vd~------~d~~~le~~i~~~tklv~le~psnptg~v~dl~~I~~la~~~------g~~vivD~a~~~~~-- 174 (378)
T TIGR01329 109 SGVVVVHVDT------TDLDKVKAALGPKTKLVLLESPTNPLQKIVDIRKISEMAHAQ------NALVVVDNTMMSPL-- 174 (378)
T ss_pred cCcEEEEeCC------CCHHHHHHhcCcCceEEEEECCCCCCCeeecHHHHHHHHHHc------CCEEEEECCCcccc--
Confidence 8999998875 278999999999999999999999999999999999999999 99999999986432
Q ss_pred ccCCCCccccCCCCeeEEEEcCcccCCCCCC--eEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHH
Q 014163 254 FLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQ 331 (429)
Q Consensus 254 ~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~a 331 (429)
... ... .++|++..|+|||+++|.+ .|+++++++. +.+.+....... |.. ......|..
T Consensus 175 -~~~--~l~---~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~-~~~~~~~~~~~~----------G~~--~~~~~a~l~ 235 (378)
T TIGR01329 175 -LCN--PLE---LGADIVYHSATKFLAGHSDVMAGVLAVKGEE-IAKKVYFLQNST----------GSG--LAPFDCWLL 235 (378)
T ss_pred -cCC--hhh---cCCcEEEEecceeccCCccceeEEEEeCcHH-HHHHHHHHHHhc----------CCc--CCHHHHHHH
Confidence 111 111 2689999999999998877 7888776543 212111111101 111 111223333
Q ss_pred HHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeE-EeeCC---------------CCceEEEEEecCCCCCCHHHHHHHH
Q 014163 332 FIRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKD---------------VGVPLVAFSLKDSSAHTVFEISEGL 395 (429)
Q Consensus 332 l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~~~~~~~~~~~~~L 395 (429)
+ .+...+..++++..+++..+.+.|++.|.+. +..|. ...++++|.+.+ .....++.+.|
T Consensus 236 ~--~~l~tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~--~~~~~~~~~~L 311 (378)
T TIGR01329 236 L--RGIKTLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGS--VALSKRLVEAT 311 (378)
T ss_pred H--ccCCCHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECC--HHHHHHHHHhC
Confidence 3 3445678889999999999999999988763 33221 024699999832 11244555555
Q ss_pred HHHHhccCceec
Q 014163 396 RKKLNRFQVVYP 407 (429)
Q Consensus 396 ~~~l~~~G~~~~ 407 (429)
. ..++.++
T Consensus 312 ~----~~~i~~s 319 (378)
T TIGR01329 312 K----LFSITVS 319 (378)
T ss_pred c----CcccccC
Confidence 4 6555544
No 191
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.83 E-value=4.9e-18 Score=167.56 Aligned_cols=325 Identities=13% Similarity=0.057 Sum_probs=199.5
Q ss_pred CCCCccccccccCCC-hHHHHHHHHHHcCcC-----CCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCch
Q 014163 54 GNPRLNLASFVTTWM-EPECDKLVMASINKN-----YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS 127 (429)
Q Consensus 54 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t 127 (429)
+.+.++|+.+.+... ++.+.+++...+... ...|...++..++++++.+++.+. ++++ ..+++|+|++
T Consensus 32 ~~~~i~l~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~-~~~~-----d~I~it~Ga~ 105 (402)
T TIGR03542 32 SADIIRLGIGDTTQPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRG-RIDP-----EEIFISDGAK 105 (402)
T ss_pred CCCeEEcCCCCCCCCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhc-CCCH-----HHEEECCCcH
Confidence 344567777777653 455777776665431 123545568888887876664331 4544 2388999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCc-----------eeEEEeccC-CccccCHHHH
Q 014163 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEV-----------ELKEVKLEE-GYYVMNPVKA 195 (429)
Q Consensus 128 ~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~-----------~v~~v~~~~-~~~~~d~~~l 195 (429)
+++... ..+.. .++.|+++.++|..+..+++..|+ ++..+|+++ +++.+|++.
T Consensus 106 ~al~~l-~~l~~-------------~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~- 170 (402)
T TIGR03542 106 CDVFRL-QSLFG-------------SDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE- 170 (402)
T ss_pred HHHHHH-HHhcC-------------CCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc-
Confidence 998864 33322 125899999999999999999999 888999863 335555422
Q ss_pred HHHhhhCCeEEEEeeCCCccccccC---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcccc-CCCC---e
Q 014163 196 VELVDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPL---V 268 (429)
Q Consensus 196 ~~~i~~~~~~v~~~~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~---~ 268 (429)
.+++++|++++|+||||.+-+ +++|+++|+++ ++++++|++|..+.. .+.....+ .... .
T Consensus 171 ----~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~------~~~iI~De~y~~~~~---~~~~~~~~~~~~~~~~~ 237 (402)
T TIGR03542 171 ----EPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEH------GSLILFDAAYSAFIS---DPSLPHSIFEIPGAKEC 237 (402)
T ss_pred ----cCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHc------CeEEEEEchhhhhcc---CCCCCcchhhCCCCccc
Confidence 146899999999999999965 88899999999 999999999987431 11111111 1111 1
Q ss_pred eEEEEcCcccC-CCCCCeEEEEEeCCCCccccc-ccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCH---HHHHHH
Q 014163 269 KSINVSGHKYG-LVYAGVGWVVWRTKDDLPDEL-VFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF---EGYKNI 343 (429)
Q Consensus 269 d~~~~s~hK~~-~~p~g~g~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~---~g~~~~ 343 (429)
..+..|.-|.+ .++.++||+++..+ ...... .....+.......+ .+ ...+.+.++...+.. ..+.+.
T Consensus 238 vi~~~SfSK~~g~pGlRiG~~i~~~~-l~~~~~~~~~~~~~~~~~~~~---~~---~s~~~q~~~~~~l~~~~~~~~~~~ 310 (402)
T TIGR03542 238 AIEFRSFSKTAGFTGVRLGWTVVPKE-LTYADGHSVIQDWERRQCTKF---NG---ASYPVQRAAEAAYAGEGLQPILEA 310 (402)
T ss_pred EEEEecCccccCCCCcceEEEEecHH-HhhcchhhHHHHHHHHhhhcc---cC---CCHHHHHHHHHHHcCcchhHHHHH
Confidence 23344556755 68899999987432 210000 00000000000000 01 122334444444432 234555
Q ss_pred HHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEE
Q 014163 344 MENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVI 423 (429)
Q Consensus 344 ~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~ 423 (429)
.+...++++++.+.|++.+ +++..+. ..+.+.+++++ ..+..++.+.|.+ +.|+.+.+.......+..++|++
T Consensus 311 ~~~~~~~~~~~~~~L~~~~-~~~~~~~-~~~f~~v~l~~--~~~~~~l~~~l~~---~~gv~v~pg~~f~~~~~~~iRis 383 (402)
T TIGR03542 311 ISYYMENARILRKALEAAG-FKVYGGE-HAPYLWVKTPE--GISSWDFFDFLLY---QYHVVGTPGSGFGPSGEGFVRFS 383 (402)
T ss_pred HHHHHHHHHHHHHHHHhcC-ceecCCC-ceeEEEEECCC--CCCHHHHHHHHHH---hCCEEEeCchhhCCCCCCEEEEE
Confidence 6677788889999999875 6665332 45566666643 4566777777651 46998876522223345689999
Q ss_pred ecc
Q 014163 424 SHL 426 (429)
Q Consensus 424 ~~~ 426 (429)
+..
T Consensus 384 ~~~ 386 (402)
T TIGR03542 384 AFG 386 (402)
T ss_pred ecC
Confidence 754
No 192
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.83 E-value=1.6e-18 Score=168.85 Aligned_cols=235 Identities=17% Similarity=0.080 Sum_probs=168.1
Q ss_pred cChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHH
Q 014163 89 EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE 168 (429)
Q Consensus 89 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~ 168 (429)
..|...++|+. +++++|.+. .+++++|++|+..++.++.. .+++|+++.+.|.+..
T Consensus 38 ~~p~~~~le~~----la~l~g~~~-------a~~~~sG~~Ai~~~l~~l~~-------------~gd~Vl~~~~~y~~~~ 93 (369)
T cd00614 38 GNPTVDALEKK----LAALEGGEA-------ALAFSSGMAAISTVLLALLK-------------AGDHVVASDDLYGGTY 93 (369)
T ss_pred CChhHHHHHHH----HHHHHCCCC-------EEEEcCHHHHHHHHHHHHcC-------------CCCEEEECCCCcchHH
Confidence 34556666654 888888754 77888999999999988754 1368999988887643
Q ss_pred ----HHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEee
Q 014163 169 ----KFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVD 244 (429)
Q Consensus 169 ----~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD 244 (429)
..+...|++++.++.+ |++++++++++++++|++.+++|++|.+.|+++|+++|+++ |+++++|
T Consensus 94 ~~~~~~~~~~g~~~~~v~~~------d~~~l~~~i~~~~~~v~~e~~~np~g~~~dl~~i~~la~~~------g~~livD 161 (369)
T cd00614 94 RLFERLLPKLGIEVTFVDPD------DPEALEAAIKPETKLVYVESPTNPTLKVVDIEAIAELAHEH------GALLVVD 161 (369)
T ss_pred HHHHHHHhhcCeEEEEeCCC------CHHHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHc------CCEEEEE
Confidence 3456778888888653 58899999988999999999999999999999999999999 9999999
Q ss_pred cccccccccccCCCCccccCCCCeeEEEEcCcccCCCCC--CeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCch
Q 014163 245 AASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYA--GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGS 322 (429)
Q Consensus 245 ~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~--g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~ 322 (429)
++|+.+.. .. ... .++|.++.|.+|+++++. ..|+++.++++.. +.+.....+. |+.
T Consensus 162 ~t~~~~~~---~~--~~~---~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~-~~l~~~~~~~----------g~~-- 220 (369)
T cd00614 162 NTFATPYL---QR--PLE---LGADIVVHSATKYIGGHSDVIAGVVVGSGEALI-QRLRFLRLAL----------GTI-- 220 (369)
T ss_pred CCCcchhc---CC--hhh---hCCcEEEeccceeccCCCCceEEEEEeCcHHHH-HHHHHHHHhh----------CCC--
Confidence 99986432 11 111 258999999999987653 3677776542322 2222111111 111
Q ss_pred hHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCC----------------CCceEEEEEecC
Q 014163 323 SQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKD----------------VGVPLVAFSLKD 382 (429)
Q Consensus 323 ~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~----------------~~~~~v~f~~~~ 382 (429)
.....+|.+++.+ +.+..++++..+++.++.++|++.|.++.+..| ...++++|.+++
T Consensus 221 ~~p~~a~~~l~~l--~tl~~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~ 294 (369)
T cd00614 221 LSPFDAWLLLRGL--KTLPLRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKG 294 (369)
T ss_pred CCHHHHHHHHcCC--CCHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCC
Confidence 1233455555544 456778889999999999999999876544322 136799999863
No 193
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.83 E-value=1.6e-18 Score=171.44 Aligned_cols=307 Identities=11% Similarity=0.030 Sum_probs=185.5
Q ss_pred CChHHHHHHHHHHcCcCCCCCccC---hhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEY---PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~ 143 (429)
.++|.+.+++.++++....+...+ .+......++.+.+++++|.+. .++.++|++|+..++..+...
T Consensus 60 ~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~~~-------~i~~~sG~~a~~~~i~~l~~~--- 129 (410)
T PRK13392 60 GQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGKES-------ALLFTSGYVSNDAALSTLGKL--- 129 (410)
T ss_pred CCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCCCC-------EEEECcHHHHHHHHHHHHhcC---
Confidence 356778888877765432111111 1122223356677999999753 555556688888777755321
Q ss_pred HHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhh----hCCeEEEEeeCCCcccccc
Q 014163 144 KRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD----ENTICVAAILGSTLTGEFE 219 (429)
Q Consensus 144 ~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~----~~~~~v~~~~~~~~tG~~~ 219 (429)
. .++.|+++...|.++...++..|+++..++.+ |.+.+++.+. +++++|++++++|++|.+.
T Consensus 130 ---~-----~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~~------d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~ 195 (410)
T PRK13392 130 ---L-----PGCVILSDALNHASMIEGIRRSGAEKQVFRHN------DLADLEEQLASVDPDRPKLIAFESVYSMDGDIA 195 (410)
T ss_pred ---C-----CCCEEEEehhhhHHHHHHHHHcCCeEEEEeCC------CHHHHHHHHHhccCCCCEEEEEeCCCCCCcccc
Confidence 0 12577777789999888888899988776532 3344444443 4789999999999999999
Q ss_pred ChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccC-CCCeeEEEEcCcccCCCCCCeEEEEEeCCCCccc
Q 014163 220 DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPD 298 (429)
Q Consensus 220 ~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~ 298 (429)
|+++|.++|+++ ++++++|+||+.+.............+ ...+|.++.+.+|+++.+ | |+++.+ ++.. +
T Consensus 196 ~l~~i~~l~~~~------~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~-G-G~~~~~-~~~~-~ 265 (410)
T PRK13392 196 PIEAICDLADRY------NALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCL-G-GYIAAS-ADLI-D 265 (410)
T ss_pred cHHHHHHHHHHc------CCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhcc-c-chhhcC-HHHH-H
Confidence 999999999999 999999999984321100000000011 235788888999977543 3 666543 2222 2
Q ss_pred cccc-ccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEE
Q 014163 299 ELVF-HINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVA 377 (429)
Q Consensus 299 ~~~~-~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~ 377 (429)
.+.. ...|... .+.+.....++.++++.+... .+..++..++++++.+.|++.+ +++.. + ..+++.
T Consensus 266 ~l~~~~~~~~~s--------~~~~~~~~~a~~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~g-~~~~~-~-~~~~~~ 332 (410)
T PRK13392 266 FVRSFAPGFIFT--------TALPPAVAAGATAAIRHLKTS--QTERDAHQDRVAALKAKLNANG-IPVMP-S-PSHIVP 332 (410)
T ss_pred HHHHhCcchhcc--------CcCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcC-CCCCC-C-CCCEEE
Confidence 1111 1111111 112222344455566544332 3445777888999999999875 76653 2 466665
Q ss_pred EEecCCCCCCHHHHHHHHHHHHhccCceeccc-CCCCCCCceEEEEEec
Q 014163 378 FSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK-LPMSYPWSTKLRVISH 425 (429)
Q Consensus 378 f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~-~~~~~~~~~~lRi~~~ 425 (429)
+.+.. ..+..++.+.|. .++|+.+... .|....+...+|++++
T Consensus 333 i~~~~--~~~~~~~~~~L~---~~~GI~v~~~~~p~~~~~~~~lRis~~ 376 (410)
T PRK13392 333 VMVGD--PTLCKAISDRLM---SEHGIYIQPINYPTVPRGTERLRITPT 376 (410)
T ss_pred EEeCC--HHHHHHHHHHHH---HhCCEEEeeeCCCCCCCCCceEEEEEC
Confidence 55431 122345555553 1579998865 3433345578999974
No 194
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.83 E-value=2.5e-18 Score=169.79 Aligned_cols=306 Identities=14% Similarity=0.049 Sum_probs=190.1
Q ss_pred CChHHHHHHHHHHcCcCCCCCccCh---hhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYP---VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~ 143 (429)
..+|.+.+++.+.++........+. +......++.+.+++++|.+. .++.++|++||..++..+...
T Consensus 59 ~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~~~-------~l~~~sG~~an~~ai~~l~~~--- 128 (402)
T TIGR01821 59 GQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGKES-------ALVFTSGYVANDATLATLAKI--- 128 (402)
T ss_pred CCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCCCe-------EEEECchHHHHHHHHHHhhCC---
Confidence 3568888888887765433221121 223444566677999998643 667777899999888876531
Q ss_pred HHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhh----hCCeEEEEeeCCCcccccc
Q 014163 144 KRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD----ENTICVAAILGSTLTGEFE 219 (429)
Q Consensus 144 ~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~----~~~~~v~~~~~~~~tG~~~ 219 (429)
..+..|+.+...|.++...+...|+++..++. .|++++++.++ +++++|++++++|++|.+.
T Consensus 129 --------~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~------~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~ 194 (402)
T TIGR01821 129 --------IPGCVIFSDELNHASMIEGIRHSGAEKFIFRH------NDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIA 194 (402)
T ss_pred --------CCCCEEEEcchHhHHHHHHHHHcCCeEEEECC------CCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCcc
Confidence 01245666667899888888888887655542 36677777775 2578999999999999999
Q ss_pred ChHHHHHHHHHhhhccCCCccEEeecccccccc-cccCCCCccccCC-CCeeEEEEcCcccCCCCCCeEEEEEeCCCCcc
Q 014163 220 DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIA-PFLYPDLEWDFRL-PLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP 297 (429)
Q Consensus 220 ~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~-~~~~~~~~~~~~~-~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~ 297 (429)
|+++|.++|++| ++++++|+||+.+.. +.... .....++ ..+|.+..+..|.++. .| |+++.++ + +.
T Consensus 195 ~l~~i~~l~~~~------~~~livDea~~~G~~g~~g~g-~~~~~~~~~~~div~~t~sKa~g~-~G-G~i~~~~-~-~~ 263 (402)
T TIGR01821 195 PIEEICDLADKY------GALTYLDEVHAVGLYGPRGGG-IAERDGLMHRIDIIEGTLAKAFGV-VG-GYIAASR-K-LI 263 (402)
T ss_pred CHHHHHHHHHHc------CCEEEEeCcccccccCCCCCc-cchhccCCCCCeEEEEechhhhcc-CC-ceeecCH-H-HH
Confidence 999999999999 999999999984321 11100 0011111 2468887788897754 33 5655432 2 22
Q ss_pred ccccc-ccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEE
Q 014163 298 DELVF-HINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLV 376 (429)
Q Consensus 298 ~~~~~-~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v 376 (429)
+.+.. ...|. +.++.+.....+..++++.+... .+..++..++++++.+.|++++ ++++.+ ..+++
T Consensus 264 ~~l~~~~~~~~--------~t~~~~~~~~aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~g-~~~~~~--~~~i~ 330 (402)
T TIGR01821 264 DAIRSYAPGFI--------FTTSLPPAIAAGATASIRHLKES--QDLRRAHQENVKRLKNLLEALG-IPVIPN--PSHIV 330 (402)
T ss_pred HHHHHhCcCce--------ecCcCCHHHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHHcC-CCcCCC--CCCEE
Confidence 22211 11111 11222223444455666554433 4455666789999999999885 766533 45676
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHhccCceeccc-CCCCCCCceEEEEEec
Q 014163 377 AFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK-LPMSYPWSTKLRVISH 425 (429)
Q Consensus 377 ~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~-~~~~~~~~~~lRi~~~ 425 (429)
.+.+.. .....++.+.|. .++|+.++.. .|....+...+|++++
T Consensus 331 ~i~~~~--~~~a~~~~~~L~---~~~Gi~v~~~~~p~~~~g~~~lRis~~ 375 (402)
T TIGR01821 331 PVIIGD--AALCKKVSDLLL---NKHGIYVQPINYPTVPRGTERLRITPT 375 (402)
T ss_pred EEEeCC--HHHHHHHHHHHH---hcCCEEEEeECCCCCCCCCceEEEEeC
Confidence 665532 112334444443 1459998765 4443345567999984
No 195
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.83 E-value=1.5e-18 Score=168.64 Aligned_cols=231 Identities=16% Similarity=0.119 Sum_probs=163.9
Q ss_pred hhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchH----
Q 014163 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC---- 166 (429)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s---- 166 (429)
|...+|| +.++++.|.+. .++++||++|+..++ .+.. .+++|+++++.|.+
T Consensus 52 pt~~~le----~~la~l~g~~~-------~~~~~sG~~ai~~~~-~ll~-------------~Gd~Vl~~~~~y~~t~~~ 106 (366)
T PRK08247 52 PTRGVLE----QAIADLEGGDQ-------GFACSSGMAAIQLVM-SLFR-------------SGDELIVSSDLYGGTYRL 106 (366)
T ss_pred chHHHHH----HHHHHHhCCCc-------EEEEcCHHHHHHHHH-HHhC-------------CCCEEEEecCCcCcHHHH
Confidence 3445555 45899999975 678888999887654 3332 13689999888775
Q ss_pred HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecc
Q 014163 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (429)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a 246 (429)
+...++..|++++.++. .|+++++++++++|++|++++|+||+|.+.++++|+++|+++ ++++++|++
T Consensus 107 ~~~~~~~~G~~v~~vd~------~d~~~l~~~i~~~tklv~le~P~NP~~~~~dl~~I~~la~~~------g~~lIvD~t 174 (366)
T PRK08247 107 FEEHWKKWNVRFVYVNT------ASLKAIEQAITPNTKAIFIETPTNPLMQETDIAAIAKIAKKH------GLLLIVDNT 174 (366)
T ss_pred HHHHhhccCceEEEECC------CCHHHHHHhcccCceEEEEECCCCCCCcHHHHHHHHHHHHHc------CCEEEEECC
Confidence 44456678999888864 388999999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCCccccCCCCeeEEEEcCcccCCCCCC--eEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhH
Q 014163 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQ 324 (429)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~ 324 (429)
|+.... ..+ . ..++|.++.|..|++.++.+ .|+++.+++. +...+.....+.+. . ..
T Consensus 175 ~~~~~~--~~p-~-----~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~-l~~~~~~~~~~~g~----------~--~s 233 (366)
T PRK08247 175 FYTPVL--QRP-L-----EEGADIVIHSATKYLGGHNDVLAGLVVAKGQE-LCERLAYYQNAAGA----------V--LS 233 (366)
T ss_pred Cccccc--cCc-h-----hcCCcEEEeecceeccCCCceeeeEEecChHH-HHHHHHHHHHhcCC----------C--CC
Confidence 964321 111 1 13689999999999987654 4666654332 21221111111111 1 12
Q ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEec
Q 014163 325 IIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLK 381 (429)
Q Consensus 325 ~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~ 381 (429)
...+|.+++.+ +.+..++++..++++.+.+.|+++|++..+..|...++++|.+.
T Consensus 234 ~~~a~l~~~~l--~tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf~~~ 288 (366)
T PRK08247 234 PFDSWLLIRGM--KTLALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSFRLQ 288 (366)
T ss_pred hHHHHHHHhcc--CcHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEEEEC
Confidence 23456665544 35667788889999999999999998875544446789999874
No 196
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.83 E-value=3.6e-18 Score=165.99 Aligned_cols=307 Identities=14% Similarity=0.100 Sum_probs=196.0
Q ss_pred CCCccccccccCC-ChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHH
Q 014163 55 NPRLNLASFVTTW-MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLA 133 (429)
Q Consensus 55 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~a 133 (429)
...++|..+.+.+ ++|.+.+.+.+.+.. ...|. .++..+++++ +++.++++++ .+++|+|+++++.++
T Consensus 30 ~~~i~l~~~~~~~~~~~~~~~~~~~~~~~-~~~Y~-~~~~~~lr~~----ia~~~~~~~~-----~I~it~G~~~al~~~ 98 (357)
T PRK14809 30 DDLVKLSSNENPHGPSPAAVEAIREAAER-VHSYP-KASHADLTAA----LADRWDVSPE-----QVWLANGGDGALDYL 98 (357)
T ss_pred cceeEecCCCCCCCCCHHHHHHHHHHHhh-hhcCC-CCCHHHHHHH----HHHHhCCCcc-----eEEECCCHHHHHHHH
Confidence 3445566665544 456677777665542 23332 2445555544 6666777653 388999999999988
Q ss_pred HHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccC-CccccCHHHHHHHhhhCCeEEEEeeCC
Q 014163 134 GLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGS 212 (429)
Q Consensus 134 l~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~~~ 212 (429)
+.++.+ .++.|++++++|..+...++..|++++.++++. +++.+|++++++.+ +++++|++++|+
T Consensus 99 ~~~~~~-------------~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~-~~~k~i~l~~p~ 164 (357)
T PRK14809 99 ARAMLD-------------PGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAY-DGERIVYLTSPH 164 (357)
T ss_pred HHHhcC-------------CCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhh-cCCcEEEEeCCC
Confidence 887754 236899999999888888899999999999863 34788988888776 467899999999
Q ss_pred CccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcccc-CCCCeeEEEEcCcccC-CCCCCeEEEEE
Q 014163 213 TLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYG-LVYAGVGWVVW 290 (429)
Q Consensus 213 ~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~d~~~~s~hK~~-~~p~g~g~l~~ 290 (429)
||||.+-+.+++.++++...+ ++++++|++|+.+.. .+.....+ ..+++-.+. +.-|.+ +++.++||++.
T Consensus 165 NPTG~~~s~~~~~~l~~~~~~----~~~iI~De~y~~~~~---~~~~~~~~~~~~~vi~~~-SfSK~~~~~GlRiG~~~~ 236 (357)
T PRK14809 165 NPTGSEIPLDEVEALAERTDE----ETLVVVDEAYGEFAE---RPSAVALVEERDDVAVLR-TFSKAYGLAGLRLGYAVV 236 (357)
T ss_pred CCCCcCCCHHHHHHHHHhCcc----CcEEEEechhhhccC---CchhHHHHhhCCCEEEEe-cchhHhcCcchhheeeec
Confidence 999999998888888876521 689999999987431 11100011 112343333 445655 58899999987
Q ss_pred eCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeC
Q 014163 291 RTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-FEGYKNIMENCMGNARALREGLEKTGRFEILSK 369 (429)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~-~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 369 (429)
.+ +.. +.+... . ..+ . ...+.+.+++..+. .+-+++..+...++++++.+.|.... + +
T Consensus 237 ~~-~~~-~~~~~~---~----~~~----~---~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~----~-~ 295 (357)
T PRK14809 237 PE-EWA-DAYARV---N----TPF----A---ASELACRAGLAALDDDEHVERTVETARWAREYIREELDAPT----W-E 295 (357)
T ss_pred CH-HHH-HHHHHh---C----CCC----C---CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcCcc----C-C
Confidence 43 222 222111 0 001 1 22334555555554 33456666777777888888886531 2 3
Q ss_pred CCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 370 DVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 370 ~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
+ ..+++.+++. +..++.+.|. ++|+.+.+..... ...++|++++++
T Consensus 296 ~-~g~f~~~~~~-----~~~~~~~~l~----~~gv~v~~g~~f~--~~~~iRls~~~~ 341 (357)
T PRK14809 296 S-AGNFVLAEVG-----DASAVAEAAQ----ERGVIVRDCTSFG--LPECIRITCGTR 341 (357)
T ss_pred C-CCCEEEEECC-----CHHHHHHHHH----HCCEEEEECccCC--CCCeEEEecCCH
Confidence 3 4555556552 3456666666 8999988762222 235799998753
No 197
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.83 E-value=1.2e-18 Score=169.25 Aligned_cols=233 Identities=16% Similarity=0.080 Sum_probs=165.7
Q ss_pred ChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHH
Q 014163 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (429)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~ 169 (429)
.|....||++ ++++.|.+. .++++||++|+..++.++.. .+++|+++++.|..+..
T Consensus 49 nPt~~~lE~~----lA~l~g~~~-------~~~~~sG~~Ai~~al~all~-------------~GD~Vl~~~~~y~~t~~ 104 (377)
T TIGR01324 49 TLTHFALQDA----MCELEGGAG-------CYLYPSGLAAVTNSILAFVK-------------AGDHVLMVDSAYEPTRY 104 (377)
T ss_pred CccHHHHHHH----HHHHhCCCc-------EEEECcHHHHHHHHHHHhcC-------------CCCEEEEcCCCcHHHHH
Confidence 4566677765 788888754 88999999999999887754 23689999988876554
Q ss_pred H----HHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeec
Q 014163 170 F----ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (429)
Q Consensus 170 ~----~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~ 245 (429)
. ++..|++++.++.. +.++++++++++|++|++++++|++|.+.|+++|+++|+++ |++++||+
T Consensus 105 ~~~~~~~~~gi~v~~~d~~------~~e~l~~~i~~~tklV~lesp~Np~g~~~dl~~I~~la~~~------g~~livD~ 172 (377)
T TIGR01324 105 FCDIVLKRMGVDITYYDPL------IGEDIATLIQPNTKVLFLEAPSSITFEIQDIPAIAKAARNP------GIVIMIDN 172 (377)
T ss_pred HHHHHHHhcCcEEEEECCC------CHHHHHHhcCCCceEEEEECCCCCCCcHHHHHHHHHHHHHc------CCEEEEEC
Confidence 3 35578887776532 22789999999999999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCC--eEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchh
Q 014163 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSS 323 (429)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~ 323 (429)
+|+.+.. ..+ . ..++|+++.|.+||++++.+ .|+++.+ ++.. +.+.. ..+.. |+- .
T Consensus 173 t~a~g~~--~~p---l---~~gaDivv~S~tK~l~G~~d~~gG~v~~~-~~~~-~~l~~-~~~~~---------G~~--l 230 (377)
T TIGR01324 173 TWAAGLL--FKP---L---EHGVDISIQAGTKYLVGHSDIMIGTVVAN-ARTW-DQLRE-HSYLM---------GQM--V 230 (377)
T ss_pred CCccccc--cCc---c---ccCceEEEecCceeccCCCCceEEEEEeC-HHHH-HHHHH-HHHHh---------CCC--C
Confidence 9986543 111 1 13699999999999988765 3655543 3222 11111 11111 111 1
Q ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeE-EeeCC---------------CCceEEEEEecC
Q 014163 324 QIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKD---------------VGVPLVAFSLKD 382 (429)
Q Consensus 324 ~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~ 382 (429)
.....|..++. .+.+..++++..+++..+.+.|++.|.++ +..|. ...++++|++++
T Consensus 231 ~p~~a~~~~rg--l~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~ 303 (377)
T TIGR01324 231 DADDAYTTLRG--LRTLGVRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQR 303 (377)
T ss_pred CHHHHHHHHhh--hhhHHHHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECC
Confidence 22345555543 34567779999999999999999999774 44331 125799999864
No 198
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.83 E-value=5.5e-18 Score=168.13 Aligned_cols=330 Identities=14% Similarity=0.054 Sum_probs=197.5
Q ss_pred CCccccccccCC-Ch--HHHHHHHHHHcCcC-----CCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCch
Q 014163 56 PRLNLASFVTTW-ME--PECDKLVMASINKN-----YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS 127 (429)
Q Consensus 56 ~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~-----~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t 127 (429)
..++|+.+.|.. +. +.+.+++...++.. ...|....+..++++.+.+++.+.+|.+.+. ..+++|+|++
T Consensus 31 ~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~---~~I~it~Ga~ 107 (416)
T PRK09440 31 GAIMLGGGNPAHIPEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNISP---QNIALTNGSQ 107 (416)
T ss_pred CceeccCCCCCccCCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCh---hhEEEccChH
Confidence 346677777753 22 34667776666542 1245555678899999999998888875432 2488999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEE-cCCCchHHHHHHHhcC----ceeEEEeccCC--ccccCHHHHHHHhh
Q 014163 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVT-GANVQVCWEKFARYFE----VELKEVKLEEG--YYVMNPVKAVELVD 200 (429)
Q Consensus 128 ~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~-~~~~h~s~~~~~~~~G----~~v~~v~~~~~--~~~~d~~~l~~~i~ 200 (429)
+++.+++.++... +.+..++.|++ ..++++.+...+...| ..+..++++++ .+.+|+++|+ +.
T Consensus 108 ~al~~~~~~l~~~--------~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~ 177 (416)
T PRK09440 108 SAFFYLFNLFAGR--------RADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--ID 177 (416)
T ss_pred HHHHHHHHHHhcc--------ccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cC
Confidence 9999888877541 00012357888 6999998887665443 23344454432 2679999997 46
Q ss_pred hCCeEEEEeeCCCccccccC---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcc
Q 014163 201 ENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHK 277 (429)
Q Consensus 201 ~~~~~v~~~~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK 277 (429)
++++++++++|+||||.+-+ +++|+++|+++ ++++++|++|+.............. ..+++ .+..|..|
T Consensus 178 ~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~------~~~iI~De~Y~~~~~~~~~~~~~~~-~~~~v-I~~~SfSK 249 (416)
T PRK09440 178 EDTGAICVSRPTNPTGNVLTDEELEKLDALARQH------NIPLLIDNAYGPPFPGIIFSEATPL-WNPNI-ILCMSLSK 249 (416)
T ss_pred CCceEEEEecCCCCCCccCCHHHHHHHHHHHHHc------CCcEEEeCCccccCCCcchhhcCcc-ccCCe-EEEecccc
Confidence 67899999999999999955 77888899999 9999999999742211000000000 01233 33446678
Q ss_pred cCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHH-----HHHHHHHHHH
Q 014163 278 YGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKN-----IMENCMGNAR 352 (429)
Q Consensus 278 ~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~-----~~~~~~~~~~ 352 (429)
+++++.++||++.. ++.. +.+........ .+ ...+.+.++...+....+.+ ..+...++++
T Consensus 250 ~~~pGlRiG~~i~~-~~l~-~~~~~~~~~~~---------~~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~ 315 (416)
T PRK09440 250 LGLPGVRCGIVIAD-EEII-EALSNMNGIIS---------LA---PGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQ 315 (416)
T ss_pred cCCCcceEEEEeCC-HHHH-HHHHHHHHHhc---------cC---CCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 88999999998753 2222 22211111110 01 23334555555553322222 2333455666
Q ss_pred HHHHHHHhC-CC--eEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceeccc--CCCCCC-----CceEEEE
Q 014163 353 ALREGLEKT-GR--FEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK--LPMSYP-----WSTKLRV 422 (429)
Q Consensus 353 ~l~~~L~~~-~~--~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~--~~~~~~-----~~~~lRi 422 (429)
.+.+.|.+. ++ +.+.. +.....+.+.+++. ..+..++.+.|. ++|+.+.+. +..... +..++|+
T Consensus 316 ~~~~~L~~~l~~~~~~~~~-p~gg~fiw~~~~~~-~~~~~~~~~~l~----~~gV~v~pg~~F~~~~~~~~~~~~~~iRi 389 (416)
T PRK09440 316 LAIALLRRYLPDEPCLIHK-PEGAIFLWLWFKDL-PITTEELYQRLK----ARGVLVVPGHYFFPGLDEDWPHAHQCIRM 389 (416)
T ss_pred HHHHHHHHhcccCCeEEec-CCCceEEEEECCCC-CCCHHHHHHHHH----HCCEEEechHhhCCCCccccCCcCceEEE
Confidence 677777653 22 44333 32344444455321 245667777776 899998875 211111 1347999
Q ss_pred Eecc
Q 014163 423 ISHL 426 (429)
Q Consensus 423 ~~~~ 426 (429)
|++.
T Consensus 390 s~~~ 393 (416)
T PRK09440 390 NYVQ 393 (416)
T ss_pred EecC
Confidence 9963
No 199
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.83 E-value=7.2e-18 Score=178.74 Aligned_cols=336 Identities=11% Similarity=0.033 Sum_probs=213.7
Q ss_pred CCCCCCCCHHHHHHHHHHhhccCCC-CCccccccccCCChHHHHHHHHHH---cCc-CCCCCccChhhHHHHHHHHHHHH
Q 014163 31 KMPDNSMPKEAAYQVINDELMLDGN-PRLNLASFVTTWMEPECDKLVMAS---INK-NYVDMDEYPVTTELQNRCVNMIA 105 (429)
Q Consensus 31 ~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~le~~~~~~la 105 (429)
.+|. +.++.++++++.+...++.. ..|.-.++++...++.+.+-+.+- +.. .+.+++.+++.-+.-.+...+++
T Consensus 53 ~lp~-~~sE~e~~~~~~~la~~N~~~~~~ig~G~y~~~~P~vi~~~i~~~~~~~t~ytPyQ~EisQG~Leal~~~Qt~la 131 (954)
T PRK05367 53 DLPA-ALSEAEALAELRAIASKNKVFRSYIGQGYYGTHTPPVILRNILENPAWYTAYTPYQPEISQGRLEALLNFQTMVA 131 (954)
T ss_pred CCCC-CCCHHHHHHHHHHHHhcCCCCCcccCCCCCCCcCcHHHHHHHHhCcchhhccCCCChHHHHHHHHHHHHHHHHHH
Confidence 4543 46899999999988765433 223222333333334343433321 111 22333456677777779999999
Q ss_pred HhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHH----HHHHhcCceeEEE
Q 014163 106 HLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE----KFARYFEVELKEV 181 (429)
Q Consensus 106 ~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~----~~~~~~G~~v~~v 181 (429)
+|+|++. ....++.++|.+....+++.+.+ ++ ++++|++++..|++.. ..++..|++++.+
T Consensus 132 ~LtG~~~-----anaSl~d~aTAa~ea~~~a~~~~-------~~---~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~ 196 (954)
T PRK05367 132 DLTGLEI-----ANASLLDEATAAAEAMALAKRVS-------KS---KSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVG 196 (954)
T ss_pred HHHCCCh-----hhccccccHHHHHHHHHHhhhhc-------cC---CCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEe
Confidence 9999986 23677788888877555544321 11 1268999999999744 4467789999999
Q ss_pred eccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc
Q 014163 182 KLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW 261 (429)
Q Consensus 182 ~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~ 261 (429)
|.+++ ++ .+++.. ++++..+.+|.+.|+++|+++||++ |++++||+.+..... ..
T Consensus 197 ~~~~d---~~--------~~~~~~-vlvq~p~~~G~i~d~~~i~~~ah~~------Gal~~vda~~~Al~~--l~----- 251 (954)
T PRK05367 197 DAAKA---LD--------HDDVFG-VLLQYPGTSGEVRDYTALIAAAHAR------GALVAVAADLLALTL--LT----- 251 (954)
T ss_pred cCccC---CC--------cccEEE-EEEecCCCCeeeccHHHHHHHHHHc------CCEEEEEehhhhccC--CC-----
Confidence 97542 21 224444 4555568889999999999999999 999999997633222 11
Q ss_pred ccCCCCeeEEEEcCcccC----CCCCCeEEEEEeCCCCcccccc-cccCCCCC--CCCCce------------eccCCch
Q 014163 262 DFRLPLVKSINVSGHKYG----LVYAGVGWVVWRTKDDLPDELV-FHINYLGS--DQPTFT------------LNFSKGS 322 (429)
Q Consensus 262 ~~~~~~~d~~~~s~hK~~----~~p~g~g~l~~~~~~~~~~~~~-~~~~~~~~--~~~~~~------------~~~tr~~ 322 (429)
+.+..++|+++.++|||+ ++++++|+++++++ +.+.+. ....+... ....+. -.+|.+.
T Consensus 252 ~pge~GaDi~vgs~qkfg~P~g~GGP~aGflavr~~--~~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNi 329 (954)
T PRK05367 252 PPGEMGADIAVGSAQRFGVPMGFGGPHAAYFAVRDA--YKRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNI 329 (954)
T ss_pred ChhhcCCCEEEeeCcccCCCCCCCCCCEEEEEECHH--HHhhCCCCeeeeecccCCCccccccccccccccccccccccc
Confidence 123347999999999994 22335999999863 212221 11111100 000000 0244443
Q ss_pred hHHHHHHHH-----HHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHH
Q 014163 323 SQIIAQYYQ-----FIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRK 397 (429)
Q Consensus 323 ~~~~~~~~a-----l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~ 397 (429)
....++.+. +.++|.+|++++.++...+++++.++|++. ++++..+. .+..++|++. .+..++.++|.
T Consensus 330 ct~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~~-G~~~~~~~-~f~~~~~~~~----~~~~~i~~~l~- 402 (954)
T PRK05367 330 CTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRAL-GLEVVHDS-FFDTLTVEVG----GDAAAVLARAL- 402 (954)
T ss_pred chHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhc-CcccCCCC-CCCeEEEeCC----CCHHHHHHHHH-
Confidence 332222222 356799999999999999999999999885 48877654 5678888752 25677888887
Q ss_pred HHhccCceecccCCCCCCCceEEEEEec
Q 014163 398 KLNRFQVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 398 ~l~~~G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
++||.++.. ....+|+|++
T Consensus 403 ---~~gi~~~~~------~~~~l~is~~ 421 (954)
T PRK05367 403 ---AAGINLRRV------DDDHVGISLD 421 (954)
T ss_pred ---HCCceeccc------cCCEEEEEec
Confidence 999987532 1234899875
No 200
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.83 E-value=5.5e-18 Score=162.86 Aligned_cols=314 Identities=15% Similarity=0.107 Sum_probs=190.5
Q ss_pred HHHHHHHHHHhhccCCC-CCccccccccCCChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCC
Q 014163 39 KEAAYQVINDELMLDGN-PRLNLASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKT 117 (429)
Q Consensus 39 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~ 117 (429)
.+..++++.+.....+. |-++ |..-..+|.+.++..++++..+ +..++.+++.+.+++++|.+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~---ylgl~~~~~~~~~~~~~~~~~~-------g~~~~~~~Le~~lA~~~g~~~e---- 72 (346)
T TIGR03576 7 REKALEIIREKISRGGRDSLYD---LTGLAGGFKIDEEDLELLETYV-------GPAIFEEKVQELGREHLGGPEE---- 72 (346)
T ss_pred HHHHHHHHHHHHhccCCccccc---cccCCCChhHHHHHHHHHHHhc-------CCHHHHHHHHHHHHHHcCCCcc----
Confidence 35667788777665433 3222 2222345777777666665432 3457778888889999999642
Q ss_pred CCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEc---CCCchHHHHHHHhcCceeEEEeccCCccccCHHH
Q 014163 118 AVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTG---ANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVK 194 (429)
Q Consensus 118 ~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~---~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~ 194 (429)
...+++||++||..++.++.++ +++|+++ .+.|.++...++..|+++... .|+++
T Consensus 73 -~ilv~~gg~~a~~~~~~al~~~-------------gd~Vli~~~d~p~~~s~~~~~~l~ga~~~~~--------~~l~~ 130 (346)
T TIGR03576 73 -KILVFNRTSSAILATILALEPP-------------GRKVVHYLPEKPAHPSIPRSCKLAGAEYFES--------DELSE 130 (346)
T ss_pred -eEEEECCHHHHHHHHHHHhCCC-------------CCEEEECCCCCCCchhHHHHHHHcCCEEecc--------CCHHH
Confidence 3889999999999999887642 3577753 479999999999999875322 23444
Q ss_pred HHHHhhhCCeEEEEeeCCCccccc---cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEE
Q 014163 195 AVELVDENTICVAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSI 271 (429)
Q Consensus 195 l~~~i~~~~~~v~~~~~~~~tG~~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~ 271 (429)
++. .+++++|+++ +++++|.+ .++++|+++|+++ ++|++||+||+.+............ .++|.+
T Consensus 131 l~~--~~~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~------~~~livDEAy~~~~~~~~~~~~~~~---~~~div 198 (346)
T TIGR03576 131 LKK--IDGTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSK------EAIVLVDDASGARVRRLYGQPPALD---LGADLV 198 (346)
T ss_pred Hhh--CcCceEEEEE-CCCCCCcccCHHHHHHHHHHHHHc------CCEEEEECCccccccccCCCCCHHH---cCCcEE
Confidence 433 2457777664 57888988 7899999999999 9999999999875421111111011 136788
Q ss_pred EEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Q 014163 272 NVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNA 351 (429)
Q Consensus 272 ~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~ 351 (429)
+.+.+|++ +++..|+++.++ +.. +.+..... .+. .+.+.....+..++|+.+ ..+...+...+++
T Consensus 199 v~s~SKal-aG~r~G~v~~~~-~li-~~l~~~~~-------~~~--~s~~~~~~~aa~~aL~~~---~~~~~~~~l~~r~ 263 (346)
T TIGR03576 199 VTSTDKLM-DGPRGGLLAGRK-ELV-DKIKSVGE-------QFG--LEAQAPLLAAVVRALEEF---ELSRIRDAFKRKE 263 (346)
T ss_pred Eeccchhc-cccceEEEEeCH-HHH-HHHHHhhc-------Ccc--cCccHHHHHHHHHHHhhc---cHHHHHHHHHHHH
Confidence 88999954 456678887643 222 22221111 111 111112233333444332 2344556666777
Q ss_pred HHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHH-HHHHHHHHhccCceecccCCCCCCCceEEEEEecccc
Q 014163 352 RALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEI-SEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLRR 428 (429)
Q Consensus 352 ~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~-~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~~ 428 (429)
+++.+.++++ .+. ++ ..+++.+++.+ .+..++ .+.|. ++|+.+++.+... ....++|||++.+.
T Consensus 264 ~~~~~~l~~~---~~~-~~-~~~f~~~~~~~---~~~~~~~~~ll~----~~gV~v~~~~~f~-~~~~~vRis~~~~~ 328 (346)
T TIGR03576 264 EVYLRLFDKL---NVE-RT-PTGFVIKGVEE---EKLIEIGLDLLR----NYGIITITAVGMP-GASKTLRFDLAAKD 328 (346)
T ss_pred HHHHHHHHhC---CCC-cC-CCeEEEEeCCC---CCHHHHHHHHHH----hCCEEEeCCcccC-CCCCeEEEEEecCh
Confidence 7777777643 333 22 35555555532 122233 33444 8899988752111 12457999998753
No 201
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.83 E-value=2.8e-19 Score=171.86 Aligned_cols=268 Identities=14% Similarity=0.102 Sum_probs=177.4
Q ss_pred HHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCcee
Q 014163 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVEL 178 (429)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v 178 (429)
+..+.+|++||.+. .-.+++|+|.+|..++.+++.+ ++.|++++++|-|+..++.+.|+.+
T Consensus 70 eAe~~aA~~fGAd~------t~flvnGsT~g~~a~i~a~~~~-------------gd~VLv~RN~HkSv~~alil~ga~P 130 (417)
T PF01276_consen 70 EAEELAARAFGADK------TFFLVNGSTSGNQAMIMALCRP-------------GDKVLVDRNCHKSVYNALILSGAIP 130 (417)
T ss_dssp HHHHHHHHHHTESE------EEEESSHHHHHHHHHHHHHTTT-------------TCEEEEETT--HHHHHHHHHHTEEE
T ss_pred HHHHHHHHhcCCCe------EEEEecCchHHHHHHHHHhcCC-------------CCEEEEcCCcHHHHHHHHHHcCCeE
Confidence 45567999999985 2667788999999998888762 3699999999999999999999999
Q ss_pred EEEeccCCc----cccCH-----HHHHHHhhhCC--e---EEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEee
Q 014163 179 KEVKLEEGY----YVMNP-----VKAVELVDENT--I---CVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVD 244 (429)
Q Consensus 179 ~~v~~~~~~----~~~d~-----~~l~~~i~~~~--~---~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD 244 (429)
++++...+. +.+++ +.++++|++.+ + +|++++||. -|.+.|+++|+++|+++ ++.|+||
T Consensus 131 vyi~p~~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~di~~I~~~~h~~------~~~llvD 203 (417)
T PF01276_consen 131 VYIPPEDNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYDIKEIAEICHKH------GIPLLVD 203 (417)
T ss_dssp EEEEEEE-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE-HHHHHHHHCCT------ECEEEEE
T ss_pred EEecCCccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEEECHHHHHHHhccc------CCEEEEE
Confidence 999874211 24566 99999998754 3 488888854 59999999999999999 9999999
Q ss_pred cccccccccccCCCCccccCCCCee-------EEEEcCcccCCCCCCeEEEEEeCCC-CcccccccccCCCCCCCCCcee
Q 014163 245 AASGGFIAPFLYPDLEWDFRLPLVK-------SINVSGHKYGLVYAGVGWVVWRTKD-DLPDELVFHINYLGSDQPTFTL 316 (429)
Q Consensus 245 ~a~~~~~~~~~~~~~~~~~~~~~~d-------~~~~s~hK~~~~p~g~g~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 316 (429)
+|||+.+. | .+ ...+.-..++| .++.|.||.+.+-...+++.+++.. .-.+.+.........
T Consensus 204 EAhGah~~-F-~~-lp~~a~~~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~l~~~~T------- 273 (417)
T PF01276_consen 204 EAHGAHFG-F-HP-LPRSALALGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEALSMHQT------- 273 (417)
T ss_dssp -TT-TTGG-C-SG-GGTTCSSTTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHHHHHHS--------
T ss_pred cccccccc-C-CC-CccchhhccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHHHHHHcC-------
Confidence 99987653 2 22 11122223577 9999999999999999999998764 221222111122222
Q ss_pred ccCCchhHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHHHHH---HhCCCeEEeeCCC----C----------------
Q 014163 317 NFSKGSSQIIAQYYQFIRL-GFEGYKNIMENCMGNARALREGL---EKTGRFEILSKDV----G---------------- 372 (429)
Q Consensus 317 ~~tr~~~~~~~~~~al~~l-~~~g~~~~~~~~~~~~~~l~~~L---~~~~~~~~~~~~~----~---------------- 372 (429)
-|++...+.++-.+.+.+ +.+| ++.+++..+++..++++| +++..++++.++. .
T Consensus 274 -TSPSY~lmASlD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~whgf~~~ 351 (417)
T PF01276_consen 274 -TSPSYPLMASLDVARAQMEEEEG-RELLEEAIELAEEFRKKINRLNDIWGFKVLGPEDVGGEGCWDLDPGENWHGFEGL 351 (417)
T ss_dssp -SS--HHHHHHHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-SEECTCCGCB--TT-TTT--TT-
T ss_pred -CChHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhcCCCceEecCCccccCCccccccCccccchhchhc
Confidence 234344555666666677 3444 778888888999999998 5666677775531 0
Q ss_pred --------ceEEEEEecC--------CCCCCHHHHHHHHHHHHhccCceecc
Q 014163 373 --------VPLVAFSLKD--------SSAHTVFEISEGLRKKLNRFQVVYPQ 408 (429)
Q Consensus 373 --------~~~v~f~~~~--------~~~~~~~~~~~~L~~~l~~~G~~~~~ 408 (429)
..=+++..++ ..+++...+.+.|+ ++||.+-.
T Consensus 352 ~~~~~~lDP~K~ti~~pG~~~~g~~~~~Gi~g~~~~~~L~----~~~I~~Ek 399 (417)
T PF01276_consen 352 ADDYYMLDPTKLTINTPGIDADGELSELGIPGYIVEKYLR----EHGIQVEK 399 (417)
T ss_dssp -TTSEEE-TTEEEEE-STBETTSSB-SS---HHHHHHHHH----HTTEE-SE
T ss_pred ccCccccCCcEEEEEccCcCcCCcccccCCCHHHHHHHHH----HcCCEEEe
Confidence 0113333321 12578888888888 88988643
No 202
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.82 E-value=9e-19 Score=170.19 Aligned_cols=234 Identities=14% Similarity=0.039 Sum_probs=167.6
Q ss_pred ChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHH
Q 014163 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (429)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~ 169 (429)
.|....||+ .++++.|.+. +++++||++|+..++.++.. .+++|+++.+.|.+...
T Consensus 52 npt~~~Le~----~lA~leg~e~-------ivvt~gg~~Ai~~~l~all~-------------~Gd~Il~~~~~y~~~~~ 107 (388)
T PRK08861 52 NPNRGLLEQ----TLSELESGKG-------AVVTNCGTSALNLWVSALLG-------------PDDLIVAPHDCYGGTYR 107 (388)
T ss_pred CchHHHHHH----HHHHHhCCCe-------EEEECCHHHHHHHHHHHHcC-------------CCCEEEEcCCchHHHHH
Confidence 345555554 4888888643 89999999999999888753 23689999998875332
Q ss_pred ----HHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeec
Q 014163 170 ----FARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (429)
Q Consensus 170 ----~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~ 245 (429)
.....|+++..++. .|+++++++++++|++|++++|+||+|.+.|+++|+++|+++ ++++++|+
T Consensus 108 ~~~~~~~~~gi~v~~vd~------~d~e~l~~~i~~~tklV~lesP~NPtG~v~dl~~I~~la~~~------gi~vIvDe 175 (388)
T PRK08861 108 LFNTRANKGDFKVQFVDQ------SDAAALDAALAKKPKLILLETPSNPLVRVVDIAELCQKAKAV------GALVAVDN 175 (388)
T ss_pred HHHHHHhcCCeEEEEECC------CCHHHHHHhcCcCCeEEEEECCCCCCCcccCHHHHHHHHHHc------CCEEEEEC
Confidence 23345677777642 588999999999999999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCC--eEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchh
Q 014163 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSS 323 (429)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~ 323 (429)
+|+.+.. .. +.+ .++|.++.|+|||++++.+ .|+++.++++. .+.+.....+.+. - .
T Consensus 176 a~~~~~~--~~---pl~---~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~-~~~~~~~~~~~G~----------~--~ 234 (388)
T PRK08861 176 TFLTPVL--QK---PLE---LGADFVIHSTTKYINGHSDVIGGVLITKTKEH-AEELAWWGNCIGA----------T--G 234 (388)
T ss_pred Ccccccc--CC---Ccc---cCCCEEEeecceeccCCCcceeEEEEecHHHH-HHHHHHHHhccCC----------C--C
Confidence 9985432 11 122 2699999999999998876 46666554332 1222111111111 1 2
Q ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC----------------CceEEEEEecC
Q 014163 324 QIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV----------------GVPLVAFSLKD 382 (429)
Q Consensus 324 ~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----------------~~~~v~f~~~~ 382 (429)
.....|..++ |.+.+..+++++.+++..+.+.|++.|.++-+.-|. ..++++|.+++
T Consensus 235 ~p~~a~l~~r--gl~Tl~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~ 307 (388)
T PRK08861 235 TPFDSYMTLR--GIRTLGARMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAG 307 (388)
T ss_pred ChHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCC
Confidence 3334554443 456678899999999999999999999875443321 24589999863
No 203
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.82 E-value=3.8e-18 Score=166.98 Aligned_cols=235 Identities=14% Similarity=0.038 Sum_probs=165.0
Q ss_pred cChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHH-
Q 014163 89 EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCW- 167 (429)
Q Consensus 89 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~- 167 (429)
..|...++| +.++++.|.+. .+++++|++|+..++.++.. .+++|+++.+.|.+.
T Consensus 62 ~~p~~~~le----~~lA~l~g~~~-------~i~~ssG~~Ai~~~l~all~-------------~GD~Vi~~~~~y~~~~ 117 (398)
T PRK08249 62 TNPTVQAFE----EKVRILEGAEA-------ATAFSTGMAAISNTLYTFLK-------------PGDRVVSIKDTYGGTN 117 (398)
T ss_pred CChHHHHHH----HHHHHHhCCCe-------EEEeCChHHHHHHHHHHhcC-------------CCCEEEEcCCchHHHH
Confidence 345555555 45889999764 67888889999988877644 236899999999864
Q ss_pred ---HHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEee
Q 014163 168 ---EKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVD 244 (429)
Q Consensus 168 ---~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD 244 (429)
...+...|++++.++. .|+++++++|+++|++|++++++||+|.+.|+++|+++|+++ |+++++|
T Consensus 118 ~~~~~~~~~~Gi~v~~vd~------~d~e~l~~~i~~~tklV~ie~p~NPtg~v~dl~~I~~la~~~------gi~livD 185 (398)
T PRK08249 118 KIFTEFLPRMGVDVTLCET------GDHEQIEAEIAKGCDLLYLETPTNPTLKIVDIERLAAAAKKV------GALVVVD 185 (398)
T ss_pred HHHHHHHhhCCeEEEEcCC------CCHHHHHHhcCCCCeEEEEECCCCCCCccCCHHHHHHHHHHc------CCEEEEE
Confidence 3445677888776652 589999999999999999999999999999999999999999 9999999
Q ss_pred cccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCC-eEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchh
Q 014163 245 AASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG-VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSS 323 (429)
Q Consensus 245 ~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g-~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~ 323 (429)
++|+.+.. .. +. . .++|.++.|.+|+++++.. .|.+++.+++.. +.+....... |+. .
T Consensus 186 ~t~a~~~~---~~--~l--~-~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~-~~l~~~~~~~----------g~~--~ 244 (398)
T PRK08249 186 NTFATPIN---QN--PL--A-LGADLVIHSATKFLSGHADALGGVVCGSKELM-EQVYHYREIN----------GAT--M 244 (398)
T ss_pred CCcCcccc---CC--ch--h-hCCCEEeccCceecCCCCCceEEEEECCHHHH-HHHHHHHHhc----------CCC--C
Confidence 99985331 11 11 1 3689999999999876542 333344443322 2221111111 111 2
Q ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC----------------CceEEEEEecC
Q 014163 324 QIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV----------------GVPLVAFSLKD 382 (429)
Q Consensus 324 ~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----------------~~~~v~f~~~~ 382 (429)
....+|.+++. .+.+..++++..+++..+.+.|++.|.++-+.-|. ..++++|.+++
T Consensus 245 s~~~a~l~l~~--l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~ 317 (398)
T PRK08249 245 DPMSAYLILRG--MKTLKLRVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKG 317 (398)
T ss_pred CHHHHHHHHhC--cchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcC
Confidence 33345555543 35567888999999999999999999876443321 24689999864
No 204
>PLN02822 serine palmitoyltransferase
Probab=99.82 E-value=6.8e-18 Score=169.06 Aligned_cols=334 Identities=14% Similarity=0.061 Sum_probs=203.3
Q ss_pred CCCCCcccccccc-CC-ChHHHHHHHHHHcCcCCCCCccC---hhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCch
Q 014163 53 DGNPRLNLASFVT-TW-MEPECDKLVMASINKNYVDMDEY---PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS 127 (429)
Q Consensus 53 ~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t 127 (429)
+|+..++|.++.+ .. .+|.+.+++.+++.+...++..+ -+......++.+.+++++|.+. ...+++|++
T Consensus 107 ~G~~~id~~s~~~lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~~~------~i~~s~G~~ 180 (481)
T PLN02822 107 NGKDVVNFASANYLGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLGTPD------SILYSYGLS 180 (481)
T ss_pred CCceEEEeECCCcCCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhCCCC------EEEECCHHH
Confidence 4455566665533 33 46778888888887643332221 2345555666777999998763 266676666
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccC-CccccCHHHHHHHhh--hCC-
Q 014163 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVD--ENT- 203 (429)
Q Consensus 128 ~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~--~~~- 203 (429)
++..++.++.. .++.|++....|+++...+...|.+++.++.++ +++..+++++++... +++
T Consensus 181 -a~~sai~a~~~-------------~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~ 246 (481)
T PLN02822 181 -TIFSVIPAFCK-------------KGDIIVADEGVHWGIQNGLYLSRSTIVYFKHNDMESLRNTLEKLTAENKRKKKLR 246 (481)
T ss_pred -HHHHHHHHhCC-------------CCCEEEEeCCccHHHHHHHHHcCCeEEEECCCCHHHHHHHHHHHhhhhcccCCCc
Confidence 66666665543 236888999999999999999999998887642 223334444433321 234
Q ss_pred eEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCC--CCeeEEEEcCcccCCC
Q 014163 204 ICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRL--PLVKSINVSGHKYGLV 281 (429)
Q Consensus 204 ~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~--~~~d~~~~s~hK~~~~ 281 (429)
++|++..+.+++|.+.|+++|.++|++| ++++++|++|+.+...-........+++ ..+|.++.+..|.++
T Consensus 247 ~~Ivve~i~~~~G~i~~L~~i~~l~~k~------~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg- 319 (481)
T PLN02822 247 RYIVVEAIYQNSGQIAPLDEIVRLKEKY------RFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALA- 319 (481)
T ss_pred EEEEEecCCCCCCCccCHHHHHHHHHHc------CCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhh-
Confidence 6888888888999999999999999999 9999999999854321000000011222 357898888888764
Q ss_pred CCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhC
Q 014163 282 YAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKT 361 (429)
Q Consensus 282 p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~ 361 (429)
..| |+++.+. +.. +.+.. ....+++.++.+.....+..++++.+.. ..+..++.+++++++.+.|++.
T Consensus 320 ~~G-G~i~g~~-~ii-~~~~~-------~~~~~~fsa~lPp~~~~Aa~~aL~~l~~--~~~~~~~l~~~~~~l~~~L~~~ 387 (481)
T PLN02822 320 TEG-GFCTGSA-RVV-DHQRL-------SSSGYVFSASLPPYLASAAITAIDVLED--NPSVLAKLKENIALLHKGLSDI 387 (481)
T ss_pred hCC-eEEEcCH-HHH-HHHHh-------cCCceeeccccCHHHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHhc
Confidence 344 6766533 222 22111 1111222222222233333345544322 2577889999999999999998
Q ss_pred CCeEEeeCCCCceEEEEEecCCCC--CCHHHHHHHHHHHHh-ccCceeccc-CCCC--CCCceEEEEEecc
Q 014163 362 GRFEILSKDVGVPLVAFSLKDSSA--HTVFEISEGLRKKLN-RFQVVYPQK-LPMS--YPWSTKLRVISHL 426 (429)
Q Consensus 362 ~~~~~~~~~~~~~~v~f~~~~~~~--~~~~~~~~~L~~~l~-~~G~~~~~~-~~~~--~~~~~~lRi~~~~ 426 (429)
+++.+..++ ..+++.+.+.+..+ .+..+..+.+.++|. ++|+.+... .+.. .+....+|++++.
T Consensus 388 ~g~~~~~~~-~spi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~ 457 (481)
T PLN02822 388 PGLSIGSNT-LSPIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSA 457 (481)
T ss_pred CCcccCCCC-CCCEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECC
Confidence 668776544 56777777753211 112223344444543 789998754 2221 1123469998764
No 205
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.82 E-value=2.1e-18 Score=169.00 Aligned_cols=235 Identities=15% Similarity=0.044 Sum_probs=164.0
Q ss_pred ChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHH-
Q 014163 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE- 168 (429)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~- 168 (429)
.|...++| +.+++++|.+. ...+++|+.|+..++.+... .+++|+++.+.|.+..
T Consensus 64 ~p~~~~Le----~~lA~l~G~~~-------~~~~~sG~~Ai~~~l~~~l~-------------~Gd~Vl~~~~~y~~~~~ 119 (398)
T PRK07504 64 NPTVDMFE----KRMCALEGAED-------ARATASGMAAVTAAILCQVK-------------AGDHVVAARALFGSCRY 119 (398)
T ss_pred CchHHHHH----HHHHHHhCCCe-------eeEecCHHHHHHHHHHHHhC-------------CCCEEEEcCCchhHHHH
Confidence 34555555 45889999975 45677889998877765443 2368999998887643
Q ss_pred ---HHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeec
Q 014163 169 ---KFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (429)
Q Consensus 169 ---~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~ 245 (429)
..+...|++++.++ .+|+++++++++++|++|++++|+||+|.+.|+++|.++|+++ |+++++|+
T Consensus 120 ~~~~~~~~~G~~v~~vd------~~d~e~l~~ai~~~tklV~lesp~NptG~v~dl~~I~~la~~~------gi~lvvD~ 187 (398)
T PRK07504 120 VVETLLPRYGIESTLVD------GLDLDNWEKAVRPNTKVFFLESPTNPTLEVIDIAAVAKIANQA------GAKLVVDN 187 (398)
T ss_pred HHHHHHhhcCeEEEEEC------CCCHHHHHHhcCcCceEEEEECCCCCCcEecCHHHHHHHHHHc------CCEEEEEC
Confidence 34456788888875 2789999999999999999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCCccccCCCCeeEEEEcCcccCCCC-CCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhH
Q 014163 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY-AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQ 324 (429)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p-~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~ 324 (429)
+|+.+.. .. ... .++|+++.|.||++.++ .+.|.+++.+++.+...+....... |.. ..
T Consensus 188 a~a~~~~---~~--~~~---~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~----------g~~--~s 247 (398)
T PRK07504 188 VFATPLF---QK--PLE---LGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHT----------GPS--LS 247 (398)
T ss_pred Ccccccc---CC--chh---hCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHHHh----------CCC--CC
Confidence 9975432 11 111 26899999999998654 4565445544433322111000001 111 23
Q ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC----------------CceEEEEEecC
Q 014163 325 IIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV----------------GVPLVAFSLKD 382 (429)
Q Consensus 325 ~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----------------~~~~v~f~~~~ 382 (429)
...+|.+++.+ +.+..++++..+++.++.+.|++.|++.-+..|. ..++++|.+++
T Consensus 248 ~~~A~~~l~~L--~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~ 319 (398)
T PRK07504 248 PFNAWTLLKGL--ETLPVRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKG 319 (398)
T ss_pred HHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCC
Confidence 33455555443 4578888899999999999999998875333221 15699999864
No 206
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.82 E-value=2.2e-18 Score=170.14 Aligned_cols=320 Identities=13% Similarity=0.046 Sum_probs=192.3
Q ss_pred CCccccccccC-CCh-----HHHHHHHHHHcC-cCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCce--EeCCc
Q 014163 56 PRLNLASFVTT-WME-----PECDKLVMASIN-KNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGV--GTVGS 126 (429)
Q Consensus 56 ~~~~~~~~~~~-~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~--~t~g~ 126 (429)
..++|..+.|. +.+ ..+.+++..... .....|....|..++++++.+|+.+..+.+.+. + .+. .|.|+
T Consensus 30 ~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~-~--~v~~~~t~G~ 106 (404)
T PTZ00376 30 SKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAE-K--RIATVQALSG 106 (404)
T ss_pred ccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCcccccc-C--eEEEeeccCc
Confidence 33667777642 222 124444433332 223457777799999999888886544332221 1 244 58899
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEecc-CCccccCHHHHHHHhhh---C
Q 014163 127 SEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVMNPVKAVELVDE---N 202 (429)
Q Consensus 127 t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~-~~~~~~d~~~l~~~i~~---~ 202 (429)
++|+..++.++..-.. .+++|++++++|+.+..+++..|++++.+|+. ++++.+|++.+++++.. +
T Consensus 107 ~~al~~~~~~l~~~~~----------~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~ 176 (404)
T PTZ00376 107 TGALRLGFEFLKRFLP----------AGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPNG 176 (404)
T ss_pred chHHHHHHHHHHHhcC----------CCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHHHHHHHHhCCCC
Confidence 9998877664321100 23689999999999999999999999999984 34478999999999853 4
Q ss_pred CeEEEEeeCCCccccc---cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCC--cccc--CCCCeeEEEEcC
Q 014163 203 TICVAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL--EWDF--RLPLVKSINVSG 275 (429)
Q Consensus 203 ~~~v~~~~~~~~tG~~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~--~~~~--~~~~~d~~~~s~ 275 (429)
++++++++|+||||.+ +.+++|+++|++| ++++++|++|..+......... ...+ ..+++-.+...+
T Consensus 177 ~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~------~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfS 250 (404)
T PTZ00376 177 SVVLLHACAHNPTGVDPTEEQWKEIADVMKRK------NLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLVAQSFS 250 (404)
T ss_pred CEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhC------CcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEEEEeCC
Confidence 5777889999999998 4577888899999 9999999999864321000000 0011 112343444334
Q ss_pred cccCCCCCCeEEEEE--eCCCCcccccccc-cCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHH--------HHHHHH
Q 014163 276 HKYGLVYAGVGWVVW--RTKDDLPDELVFH-INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFE--------GYKNIM 344 (429)
Q Consensus 276 hK~~~~p~g~g~l~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~--------g~~~~~ 344 (429)
+-++++++++||+++ .+++.. ..+... ..+.... + ++ ...+.+.++...+... .+++..
T Consensus 251 K~~~~~GlRvG~~~~~~~~~~~~-~~l~~~~~~~~~~~---~---~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~ 320 (404)
T PTZ00376 251 KNMGLYGERIGALHIVCANKEEA-ANVLSQLKLIIRPM---Y---SS---PPIHGARIADRILSDPELRAEWLSELKEMS 320 (404)
T ss_pred CcccccccccceEEEEeCCHHHH-HHHHHHHHHHHhhh---c---CC---CchHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 444558999999853 333211 111000 0000000 0 01 1233455555555321 134455
Q ss_pred HHHHHHHHHHHHHHHhCC---CeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEE
Q 014163 345 ENCMGNARALREGLEKTG---RFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLR 421 (429)
Q Consensus 345 ~~~~~~~~~l~~~L~~~~---~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lR 421 (429)
++.+++++.+.+.|++.+ ++... ++ ..+++.|--. ..++++.|.+ +.|+.+.+ . + |
T Consensus 321 ~~~~~~r~~l~~~L~~~~~~~~~~~~-~p-~gg~f~~~~~------~~~~~~~L~~---~~~v~v~p---~---~----R 379 (404)
T PTZ00376 321 GRIQNMRQLLYDELKALGSPGDWEHI-IN-QIGMFSFTGL------TKEQVERLIE---KYHIYLLD---N---G----R 379 (404)
T ss_pred HHHHHHHHHHHHHHHhcCCCCccccc-cc-CceEEEecCC------CHHHHHHHHH---hCCEeecC---C---C----e
Confidence 677889999999999874 23333 23 4566655421 1477777772 44887643 1 1 9
Q ss_pred EEec
Q 014163 422 VISH 425 (429)
Q Consensus 422 i~~~ 425 (429)
|+++
T Consensus 380 is~~ 383 (404)
T PTZ00376 380 ISVA 383 (404)
T ss_pred EEEe
Confidence 9996
No 207
>PLN02242 methionine gamma-lyase
Probab=99.82 E-value=3.2e-18 Score=168.31 Aligned_cols=234 Identities=14% Similarity=0.031 Sum_probs=163.3
Q ss_pred ChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHH
Q 014163 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (429)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~ 169 (429)
.|...+||+ .+++++|.+. ..+++||++|+..++.++.. .+++|+++.+.|..+..
T Consensus 75 ~Pt~~~LE~----~lA~l~g~~~-------~l~~~sG~~Ai~~al~al~~-------------~GD~Vl~~~~~Y~~~~~ 130 (418)
T PLN02242 75 NPTVLNLGR----QMAALEGTEA-------AYCTASGMSAISSVLLQLCS-------------SGGHVVASNTLYGGTHA 130 (418)
T ss_pred ChhHHHHHH----HHHHHhCCCe-------EEEEccHHHHHHHHHHHHhC-------------CCCEEEEcCCcHHHHHH
Confidence 455566654 4899999975 67899999999999988764 23689999988876655
Q ss_pred HH-----HhcCceeEEEeccCCccccCHHHHHHHhhh-CCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEe
Q 014163 170 FA-----RYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (429)
Q Consensus 170 ~~-----~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~v 243 (429)
.+ +..|++++.++. .|++++++++++ +|++|++++++||+|.+.|+++|+++|+++ ++++++
T Consensus 131 ~~~~~~~~~~G~~~~~~d~------~d~e~l~~~i~~~~tklV~lesp~NPtG~v~dl~~I~~la~~~------gi~liv 198 (418)
T PLN02242 131 LLAHFLPRKCNITTTFVDI------TDLEAVKKAVVPGKTKVLYFESISNPTLTVADIPELARIAHEK------GVTVVV 198 (418)
T ss_pred HHHHhhhhccCceEEEcCC------CCHHHHHHhcCcCCCEEEEEecCCCCCCcccCHHHHHHHHHHh------CCEEEE
Confidence 43 346777766653 379999999998 499999999999999999999999999999 999999
Q ss_pred ecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCC--eEEEEEeCCCCcccccccccCCCCCCCCCceeccCCc
Q 014163 244 DAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKG 321 (429)
Q Consensus 244 D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~ 321 (429)
|++|+.+. ..+ .. .++|++..|.+|++.++.. .|+++.+ ++.. ..+...... . ....|..
T Consensus 199 Dea~~~~~---~~~---~~---~g~divv~S~SK~l~g~g~~~gG~iv~~-~~li-~~l~~~~~~---~---~~~~g~~- 260 (418)
T PLN02242 199 DNTFAPMV---LSP---AR---LGADVVVHSISKFISGGADIIAGAVCGP-AELV-NSMMDLHHG---A---LMLLGPT- 260 (418)
T ss_pred ECCCCccC---CCH---HH---cCCcEEEEeCccccCCCCCceEEEEEcC-HHHH-HHHHHHhhh---h---hhccCCC-
Confidence 99996432 111 11 2589999999998866543 4766643 3222 222111110 0 0001221
Q ss_pred hhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCC------------------CCceEEEEEec
Q 014163 322 SSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKD------------------VGVPLVAFSLK 381 (429)
Q Consensus 322 ~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~------------------~~~~~v~f~~~ 381 (429)
...+.+.+...+...+..++++..++++++.+.|++++ +++..|. ...++++|.+.
T Consensus 261 ---~~~~~A~l~~~~l~tl~~r~~~~~~~a~~la~~L~~~~-~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l~ 334 (418)
T PLN02242 261 ---MNPKVAFELSERLPHLSLRMKEHCRRAMEYAKRMKELG-LKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDMD 334 (418)
T ss_pred ---CCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCC-CEEECCCCCCCccHHHHHHhcccCCCceeEEEEEEC
Confidence 11233333334545677788899999999999999996 7777542 12468899885
No 208
>PLN02483 serine palmitoyltransferase
Probab=99.82 E-value=6.7e-18 Score=169.45 Aligned_cols=281 Identities=14% Similarity=0.053 Sum_probs=173.1
Q ss_pred HHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHh
Q 014163 94 TELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARY 173 (429)
Q Consensus 94 ~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~ 173 (429)
....+++.+.+++++|.+. .++.++|..++..++.++.. .+++|+++++.|.++...++.
T Consensus 145 ~~~~~ele~~lA~~~g~~~-------ai~~~~G~~an~~~i~al~~-------------~Gd~Vi~d~~~h~s~~~~~~~ 204 (489)
T PLN02483 145 TKLHRELEELVARFVGKPA-------AIVFGMGYATNSTIIPALIG-------------KGGLIISDSLNHNSIVNGARG 204 (489)
T ss_pred cHHHHHHHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHhCC-------------CCCEEEEcchhhHHHHHHHHH
Confidence 3444456666899999753 44445567777766666543 236899999999999999999
Q ss_pred cCceeEEEeccCCccccCHHHHHHHhh-------hCC-----eEEEEee-CCCccccccChHHHHHHHHHhhhccCCCcc
Q 014163 174 FEVELKEVKLEEGYYVMNPVKAVELVD-------ENT-----ICVAAIL-GSTLTGEFEDVKLLHDLLTKKNEETGWDTP 240 (429)
Q Consensus 174 ~G~~v~~v~~~~~~~~~d~~~l~~~i~-------~~~-----~~v~~~~-~~~~tG~~~~l~~I~~la~~~~~~~~~~~~ 240 (429)
.|++++.++.+ |+++|++.++ +++ +.++++. ..+++|.+.++++|.++|++| +++
T Consensus 205 ~Ga~v~~~~~~------d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~------~~~ 272 (489)
T PLN02483 205 SGATIRVFQHN------TPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKY------KAY 272 (489)
T ss_pred cCCeEEEEeCC------CHHHHHHHHHhhhhccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHc------CCE
Confidence 99999999853 3455555443 222 4444444 447889999999999999999 999
Q ss_pred EEeecccccccccccCCCC--ccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccc-cCCCCCCCCCceec
Q 014163 241 IHVDAASGGFIAPFLYPDL--EWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFH-INYLGSDQPTFTLN 317 (429)
Q Consensus 241 l~vD~a~~~~~~~~~~~~~--~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 317 (429)
+++|++|+.+......... ...+...++|++..+.+|.+++ .| |+++.+ ++.. +.+... ..+.. .
T Consensus 273 livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~-~G-G~i~~~-~~li-~~l~~~~~~~~~--------~ 340 (489)
T PLN02483 273 VYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGS-CG-GYIAGS-KELI-QYLKRTCPAHLY--------A 340 (489)
T ss_pred EEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhccc-Cc-eEEEcC-HHHH-HHHHHhCccccc--------c
Confidence 9999999743221000000 0111123578999999998754 44 777643 2222 222111 11111 1
Q ss_pred cCCchhHHHHHHHHHHHcC-H---HHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHH
Q 014163 318 FSKGSSQIIAQYYQFIRLG-F---EGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISE 393 (429)
Q Consensus 318 ~tr~~~~~~~~~~al~~l~-~---~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~ 393 (429)
++.+........++++.+. . +...++.++.+++++++++.|++++ +.+..+. ..+++.+.+.. ..+..++.+
T Consensus 341 ~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G-~~v~~~~-~sp~~~l~l~~--~~~~~~~~~ 416 (489)
T PLN02483 341 TSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMG-FEVLGDN-DSPVMPIMLYN--PAKIPAFSR 416 (489)
T ss_pred CCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCC-CcccCCC-CCCEEEEEECC--HHHHHHHHH
Confidence 1222122333344555432 1 2235667889999999999999985 7766543 34555554432 123456666
Q ss_pred HHHHHHhccCceeccc-CCCCCCCceEEEEEecc
Q 014163 394 GLRKKLNRFQVVYPQK-LPMSYPWSTKLRVISHL 426 (429)
Q Consensus 394 ~L~~~l~~~G~~~~~~-~~~~~~~~~~lRi~~~~ 426 (429)
.|. ++|+.+... +|....+...+|++++.
T Consensus 417 ~Ll----~~GI~v~~~~fp~~p~~~~~vRi~isa 446 (489)
T PLN02483 417 ECL----KQNVAVVVVGFPATPLLLARARICISA 446 (489)
T ss_pred HHH----HCCcEEeeeCCCCCCCCCceEEEEeCC
Confidence 666 889988754 44333444679999864
No 209
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.82 E-value=2.2e-18 Score=166.64 Aligned_cols=235 Identities=16% Similarity=0.077 Sum_probs=161.7
Q ss_pred cChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHH
Q 014163 89 EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE 168 (429)
Q Consensus 89 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~ 168 (429)
..|...+||+. ++++.|.+. ++.++||++|+.+++. +.. .+++|+++...|....
T Consensus 52 ~~p~~~~le~~----lA~leg~~~-------~v~~~sG~aAi~~~l~-~l~-------------~GD~VI~~~~~yg~~~ 106 (364)
T PRK07269 52 KNPTRAKLEET----LAAIESADY-------ALATSSGMSAIVLAFS-VFP-------------VGSKVVAVRDLYGGSF 106 (364)
T ss_pred CCccHHHHHHH----HHHHhCCCe-------EEEeCCHHHHHHHHHH-HhC-------------CCCEEEEecCCcCchH
Confidence 34566677655 788888753 8899999999998874 322 1368888887765433
Q ss_pred HHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccc
Q 014163 169 KFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASG 248 (429)
Q Consensus 169 ~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~ 248 (429)
.......-.- .+.+ .+..|+++++++++++|++|++++|+||+|.+.|+++|+++|+++ |+++++|++|+
T Consensus 107 ~~~~~~~~~~-~~~~---~~~~d~~~l~~~i~~~TklV~lesP~NPtg~~~di~~I~~la~~~------gi~vvvD~t~~ 176 (364)
T PRK07269 107 RWFNQQEKEG-RFHF---TYANTEEELIAAIEEDTDIVYIETPTNPLMVEFDIEKVAKLAHAK------GAKVIVDNTFY 176 (364)
T ss_pred HHHHHHHhcC-cEEE---EecCCHHHHHHhcCcCceEEEEECCCCCCCeeeCHHHHHHHHHHc------CCEEEEECCCc
Confidence 3222110000 1111 144689999999999999999999999999999999999999999 99999999986
Q ss_pred cccccccCCCCccccCCCCeeEEEEcCcccCCCCCC--eEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHH
Q 014163 249 GFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQII 326 (429)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~ 326 (429)
... ... + +. .++|.++.|.+|++.++.. .|++++++++. .+.+.....+. |.. ....
T Consensus 177 ~~~---~~~--p--l~-~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l-~~~~~~~~~~~----------G~~--~s~~ 235 (364)
T PRK07269 177 SPI---YQR--P--IE-LGADIVLHSATKYLSGHNDVLAGVVVTNDLEL-YEKLFYNLNTT----------GAV--LSPF 235 (364)
T ss_pred ccc---cCC--c--hh-hCCcEEEecCceeccCCCcccceEEEeCcHHH-HHHHHHHHHHh----------CCC--CCHH
Confidence 432 211 1 11 3699999999999987665 47666655432 22222111111 111 2344
Q ss_pred HHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEec
Q 014163 327 AQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLK 381 (429)
Q Consensus 327 ~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~ 381 (429)
..|.+++.+ +.+..++++..+++.++.++|++.|.+.-+..|...++++|.+.
T Consensus 236 ~a~l~~~~L--~tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~sf~~~ 288 (364)
T PRK07269 236 DSYLLMRGL--KTLSLRMERSTANAQEVVAFLKKSPAVKEVLYTGKGGMISFKVA 288 (364)
T ss_pred HHHHHHcCC--CcHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCCcCcEEEEEEC
Confidence 455555444 45888999999999999999999998754443336889999985
No 210
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.82 E-value=4.4e-18 Score=166.41 Aligned_cols=234 Identities=18% Similarity=0.143 Sum_probs=165.0
Q ss_pred ChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchH---
Q 014163 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC--- 166 (429)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s--- 166 (429)
.|...+||+. +++++|.+. .+++++|+.|+.+++.++.. .+++|+++.+.|.+
T Consensus 58 ~p~~~~le~~----lA~l~g~~~-------av~~~sG~~Ai~~~l~al~~-------------~Gd~Vi~~~~~y~~t~~ 113 (391)
T TIGR01328 58 NPTVSNLEGR----IAFLEGTEA-------AVATSSGMGAIAATLLTILK-------------AGDHLISDECLYGCTFA 113 (391)
T ss_pred CchHHHHHHH----HHHHhCCCc-------EEEECCHHHHHHHHHHHHhC-------------CCCEEEEecCcchHHHH
Confidence 3455566654 899999864 77888899999888877643 13689999887653
Q ss_pred -HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeec
Q 014163 167 -WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (429)
Q Consensus 167 -~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~ 245 (429)
+...+...|++++.++++ |+++++++++++|++|++.+++||+|.+.|+++|+++|+++ |+++++|+
T Consensus 114 ~~~~~~~~~G~~~~~vd~~------d~e~l~~~i~~~tklV~le~p~Np~G~v~dl~~I~~la~~~------gi~livD~ 181 (391)
T TIGR01328 114 LLEHALTKFGIQVDFINMA------IPEEVKAHIKDNTKIVYFETPANPTMKLIDMERVCRDAHSQ------GVKVIVDN 181 (391)
T ss_pred HHHHHHhcCCeEEEEECCC------CHHHHHHhhccCCeEEEEECCCCCCCcccCHHHHHHHHHHc------CCEEEEEC
Confidence 455567789988888753 78999999999999999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCC--eEEEEEeCCCCccccccc-ccCCCCCCCCCceeccCCch
Q 014163 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVF-HINYLGSDQPTFTLNFSKGS 322 (429)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g--~g~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~tr~~ 322 (429)
+|+.+.. .. +.. .++|.++.|.+|++.++.+ .|++ +.+++.. ..+.. ...... |..
T Consensus 182 a~a~~~~---~~--~~~---~g~Divv~S~sK~lgg~g~~~gG~v-~~~~~li-~~l~~~~~~~~~---------g~~-- 240 (391)
T TIGR01328 182 TFATPML---TN--PVA---LGVDVVVHSATKYIGGHGDVVAGLI-CGKAELL-QQIRMVGIKDMT---------GSV-- 240 (391)
T ss_pred CCchhcc---CC--chh---cCCCEEEccccccccCCCCceEEEE-EcCHHHH-HHHHHHHHHhCC---------CCC--
Confidence 9975432 11 111 3689999999999876553 3554 4444332 22211 111111 111
Q ss_pred hHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC----------------CceEEEEEecC
Q 014163 323 SQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV----------------GVPLVAFSLKD 382 (429)
Q Consensus 323 ~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----------------~~~~v~f~~~~ 382 (429)
......|.+++.+ +.+..++++..+++.++.++|++.|+++.+..|. ..++++|.+++
T Consensus 241 l~~~~a~l~l~~L--~tl~~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~ 314 (391)
T TIGR01328 241 ISPFDAWLILRGL--KTLNIRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKG 314 (391)
T ss_pred CCcHHHHHHHhCc--CcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCC
Confidence 1222344445433 4567788999999999999999999876443321 24589999864
No 211
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.82 E-value=1.7e-18 Score=159.22 Aligned_cols=285 Identities=18% Similarity=0.136 Sum_probs=182.0
Q ss_pred CCChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHH
Q 014163 66 TWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (429)
Q Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~ 145 (429)
..++|++.+++..+-...-..|..++....+|+. +++++|... +.|+.+||+||.+++.+.+++
T Consensus 10 ~g~~~~m~eam~~a~~~~~~~YG~D~~~~~~e~~----~ae~~g~~a-------~~Fv~sGT~aN~lal~~~~~~----- 73 (342)
T COG2008 10 AGPTPEMREALAAANAVGDDVYGEDPTTNALEQR----IAELFGKEA-------ALFVPSGTQANQLALAAHCQP----- 73 (342)
T ss_pred CCCCHHHHHHHHhccccCCCCCCCCHHHHHHHHH----HHHHhCCce-------EEEecCccHHHHHHHHHhcCC-----
Confidence 3567888888876643333346667777766655 889999843 899999999999999998763
Q ss_pred HhcCCCCCCcEEEEcCCCchHHHH--HHHhcCceeEEEeccCCccccCHHHHHHHhhhC------CeEEEEeeCCCcccc
Q 014163 146 KEQGKPYDKPNIVTGANVQVCWEK--FARYFEVELKEVKLEEGYYVMNPVKAVELVDEN------TICVAAILGSTLTGE 217 (429)
Q Consensus 146 ~~~g~~~~~~~vi~~~~~h~s~~~--~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~------~~~v~~~~~~~~tG~ 217 (429)
...|++.+.+|..... +...++-....+..+..++.++++++++.|..+ +.++++....|..|+
T Consensus 74 --------~~~vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~Gt 145 (342)
T COG2008 74 --------GESVICHETAHIYTDECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGT 145 (342)
T ss_pred --------CCeEEEeccccceecccCcHHHHcCCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCce
Confidence 2489999999976443 234444222222233234899999999988742 344444444447798
Q ss_pred c---cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCC
Q 014163 218 F---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (429)
Q Consensus 218 ~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~ 294 (429)
+ +.+++|+++||++ +++||+|||--+..+..+.+.. .-...++|++++.+.|.++.|.|. +++.+++
T Consensus 146 Vy~l~el~~i~~~~k~~------~l~LHmDGAR~~nA~valg~~~--~~~~~~~D~v~~~~tK~g~~~~gA--iv~gn~~ 215 (342)
T COG2008 146 VYPLDELEAISAVCKEH------GLPLHMDGARLANALVALGVAL--KTIKSYVDSVSFCLTKGGGAPVGA--IVFGNRD 215 (342)
T ss_pred ecCHHHHHHHHHHHHHh------CCceeechHHHHHHHHHcCCCH--HHHHhhCCEEEEecccCCcceeee--EEEcCHH
Confidence 8 5567888899999 9999999998554332232211 111247999999999998877653 3444443
Q ss_pred CcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCce
Q 014163 295 DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVP 374 (429)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~ 374 (429)
...+.-.....+-+. .+-+....++|. .++..+-+.....|..+++++|.+.|.+.+++++..++ +.|
T Consensus 216 ~~~~a~~~rK~~Ggl---------~~k~r~laA~~~--~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~~-~tN 283 (342)
T COG2008 216 FAKRARRWRKRAGGL---------MRKARFLAAQGL--YALEDDVWRLAADHANAMAARLAEGLEAKPGVKLAFPV-ETN 283 (342)
T ss_pred HHHHHHHHHHHhccc---------HhhhhHHHHHHH--HHHhccHHHHHHHHHHHHHHHHHHhhhhcCCceeccCC-ccc
Confidence 332221112222221 111112222332 22344445566666677899999999988889999875 788
Q ss_pred EEEEEecCCCCCCHHHHHHHHHHHHhccCceec
Q 014163 375 LVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYP 407 (429)
Q Consensus 375 ~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~ 407 (429)
.+.++++. ...+.|. ..|+...
T Consensus 284 ~vf~~l~~-------~~i~~l~----~~~~~~~ 305 (342)
T COG2008 284 MVFVRLPE-------SAIEALR----LAGALFY 305 (342)
T ss_pred EEEEECCh-------HHHHHHH----hhchhhe
Confidence 88777753 2235555 5665543
No 212
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.81 E-value=4.8e-18 Score=166.46 Aligned_cols=229 Identities=17% Similarity=0.068 Sum_probs=163.4
Q ss_pred HHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchH----HHHHHHhc
Q 014163 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYF 174 (429)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s----~~~~~~~~ 174 (429)
++.+.++++.|.+. .+++++|++|+.+++.++.. .+++|+++.+.|.. +...++..
T Consensus 64 ~Le~~lA~l~g~~~-------~v~~~sG~~Ai~~~l~all~-------------pGD~Vvv~~p~Y~~t~~~~~~~~~~~ 123 (405)
T PRK08776 64 LLGEALAELEGGAG-------GVITATGMGAINLVLNALLQ-------------PGDTLVVPHDAYGGSWRLFNALAKKG 123 (405)
T ss_pred HHHHHHHHHhCCCc-------eEEEcCHHHHHHHHHHHHhC-------------CCCEEEEccCCchHHHHHHHHHHHhc
Confidence 44456888888753 67788889999888887744 23689999888875 44455666
Q ss_pred CceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccc
Q 014163 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (429)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (429)
|+++..++. .|+++|+++++++|++|++++++||+|.+.|+++|+++|+++ |+++++|++|+.+.
T Consensus 124 g~~v~~v~~------~d~~~l~~~i~~~tklV~l~~P~NPtG~v~dl~~I~~la~~~------gi~vIvD~a~a~~~--- 188 (405)
T PRK08776 124 HFALITADL------TDPRSLADALAQSPKLVLIETPSNPLLRITDLRFVIEAAHKV------GALTVVDNTFLSPA--- 188 (405)
T ss_pred CcEEEEECC------CCHHHHHHhcCcCCeEEEEECCCCCCCccCCHHHHHHHHHHc------CCEEEEECCCcccc---
Confidence 777777653 478999999998999999999999999999999999999999 99999999997532
Q ss_pred cCCCCccccCCCCeeEEEEcCcccCCCCCC--eEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHH
Q 014163 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (429)
Q Consensus 255 ~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al 332 (429)
... +.. .++|.+..|+||++.++.+ .|+++.++++.. +.+....... |.. ...+.+|..+
T Consensus 189 ~~~--pl~---~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~-~~l~~~~~~~----------g~~--~s~~~a~l~~ 250 (405)
T PRK08776 189 LQK--PLE---FGADLVLHSTTKYINGHSDVVGGAVVARDAELH-QQLVWWANAL----------GLT--GSPFDAFLTL 250 (405)
T ss_pred cCC--ccc---ccCCEEEecCceeecCCCCceEEEEEeCCHHHH-HHHHHHHHhc----------CCC--CCHHHHHHHH
Confidence 111 111 3689999999999987765 477666554322 2221111111 111 2344455555
Q ss_pred HHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC----------------CceEEEEEecC
Q 014163 333 IRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV----------------GVPLVAFSLKD 382 (429)
Q Consensus 333 ~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----------------~~~~v~f~~~~ 382 (429)
+ +.+.++.++++..+++..+.+.|++.|.+.-+.-|. ..++++|.+++
T Consensus 251 ~--gl~tl~~r~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~ 314 (405)
T PRK08776 251 R--GLRTLDARLRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEG 314 (405)
T ss_pred h--hhCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcC
Confidence 3 345578899999999999999999999876443221 24589999864
No 213
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.81 E-value=3.2e-18 Score=167.80 Aligned_cols=235 Identities=14% Similarity=0.041 Sum_probs=166.5
Q ss_pred cChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCc----
Q 014163 89 EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQ---- 164 (429)
Q Consensus 89 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h---- 164 (429)
..|...++|+. ++++.|.+. .+++++|+.|+..++.++.. .+++|+++...|
T Consensus 68 ~~p~~~~le~~----lA~l~g~~~-------al~~~sG~~Ai~~~l~all~-------------~Gd~Vl~~~~~~~~t~ 123 (403)
T PRK07810 68 GNPTVSMFEER----LRLIEGAEA-------CFATASGMSAVFTALGALLG-------------AGDRLVAARSLFGSCF 123 (403)
T ss_pred CCchHHHHHHH----HHHHhCCCc-------EEEECChHHHHHHHHHHHhC-------------CCCEEEEccCCcchHH
Confidence 34455555544 899999864 88999999999988877643 236888887655
Q ss_pred hHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEee
Q 014163 165 VCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVD 244 (429)
Q Consensus 165 ~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD 244 (429)
..+...++..|+++++++. .|+++++++++++|++|++.+++||+|.+.|+++|+++|+++ +++++||
T Consensus 124 ~~~~~~~~~~G~~v~~vd~------~d~~~l~~ai~~~tklV~~esp~Nptg~v~dl~~I~~la~~~------g~~vivD 191 (403)
T PRK07810 124 VVCNEILPRWGVETVFVDG------EDLSQWEEALSVPTQAVFFETPSNPMQSLVDIAAVSELAHAA------GAKVVLD 191 (403)
T ss_pred HHHHHHHHHcCcEEEEECC------CCHHHHHHhcCcCceEEEEECCCCCCCeecCHHHHHHHHHHc------CCEEEEE
Confidence 3345667778999998863 388999999999999999999999999999999999999999 9999999
Q ss_pred cccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCC--eEEEEEeCCCCcccccccccCCCCCCCCCceeccCCch
Q 014163 245 AASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGS 322 (429)
Q Consensus 245 ~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~ 322 (429)
++|+.+.. .. ... .++|.++.|++|++.++.. .|+++.++ +.+...+....... |..
T Consensus 192 ~a~a~~~~---~~--~~~---~gaDivv~S~tK~l~g~g~~~gG~v~~~~-~~~~~~l~~~~~~~----------g~~-- 250 (403)
T PRK07810 192 NVFATPLL---QR--GLP---LGADVVVYSGTKHIDGQGRVLGGAILGDR-EYIDGPVQKLMRHT----------GPA-- 250 (403)
T ss_pred CCCCcccc---CC--hhh---cCCcEEEccCCceecCCcCceeEEEEeCh-HHHHHHHHHHHHHh----------CCC--
Confidence 99985432 11 111 2689999999999865432 36665543 32211111100111 111
Q ss_pred hHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCC----------------CCceEEEEEecC
Q 014163 323 SQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKD----------------VGVPLVAFSLKD 382 (429)
Q Consensus 323 ~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~----------------~~~~~v~f~~~~ 382 (429)
.....+|.+++ +.+.+..++++..+++.++.+.|++.|.++-+.-| ...++++|.+++
T Consensus 251 ~s~~~a~l~l~--~L~tl~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~ 324 (403)
T PRK07810 251 LSAFNAWVLLK--GLETLALRVRHSNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDA 324 (403)
T ss_pred CCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcC
Confidence 23334555554 34567889999999999999999999987644322 124689999864
No 214
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.81 E-value=8e-18 Score=165.17 Aligned_cols=237 Identities=18% Similarity=0.119 Sum_probs=165.6
Q ss_pred cChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHH-
Q 014163 89 EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCW- 167 (429)
Q Consensus 89 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~- 167 (429)
..|...+||+. +++++|.+. .+++++|+.|+..++.++.. .+++|+++.+.|.+.
T Consensus 62 ~~p~~~~Le~~----iA~~~g~~~-------~l~~~sG~~Ai~~al~~ll~-------------~Gd~Vl~~~~~y~~~~ 117 (400)
T PRK06234 62 GNPTSTEVENK----LALLEGGEA-------AVVAASGMGAISSSLWSALK-------------AGDHVVASDTLYGCTF 117 (400)
T ss_pred CCccHHHHHHH----HHHHhCCCc-------EEEEcCHHHHHHHHHHHHhC-------------CCCEEEEecCccchHH
Confidence 45667777755 788888653 78899999999888876654 236899999877653
Q ss_pred ---HHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEee
Q 014163 168 ---EKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVD 244 (429)
Q Consensus 168 ---~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD 244 (429)
...++..|++++.++.+ |+++++++++++|++|++++|+||+|.+.|+++|+++|++++. ++++++|
T Consensus 118 ~~~~~~~~~~G~~v~~vd~~------d~e~l~~~i~~~tklI~iesP~NPtG~v~dl~~I~~la~~~~~----~i~livD 187 (400)
T PRK06234 118 ALLNHGLTRYGVEVTFVDTS------NLEEVRNALKANTKVVYLETPANPTLKVTDIKAISNIAHENNK----ECLVFVD 187 (400)
T ss_pred HHHHHHHhhCCeEEEEECCC------CHHHHHHHhccCCeEEEEECCCCCCCCcCCHHHHHHHHHhcCC----CCEEEEE
Confidence 34567789998888742 7899999999999999999999999999999999999999511 8999999
Q ss_pred cccccccccccCCCCccccCCCCeeEEEEcCcccCCCCC-C-eEEEEEeCCCCcccccccc-cCCCCCCCCCceeccCCc
Q 014163 245 AASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYA-G-VGWVVWRTKDDLPDELVFH-INYLGSDQPTFTLNFSKG 321 (429)
Q Consensus 245 ~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~-g-~g~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~tr~ 321 (429)
++|+.+.. .. .. . .++|.++.|.+|++.++. . .|+++.++ +. .+.+... ..+.. |..
T Consensus 188 ea~~~~~~---~~--~l--~-~g~Divv~S~sK~l~g~g~~~gG~v~~~~-~~-~~~l~~~~~~~~~---------g~~- 247 (400)
T PRK06234 188 NTFCTPYI---QR--PL--Q-LGADVVVHSATKYLNGHGDVIAGFVVGKE-EF-INQVKLFGIKDMT---------GSV- 247 (400)
T ss_pred CCCCchhc---CC--ch--h-hCCcEEEeeccccccCCCCceeEEEEecH-HH-HHHHHHHHHHHhc---------CCC-
Confidence 99986432 11 11 1 258999999999987544 2 47776653 22 2222110 01010 111
Q ss_pred hhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC----------------CceEEEEEecC
Q 014163 322 SSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV----------------GVPLVAFSLKD 382 (429)
Q Consensus 322 ~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----------------~~~~v~f~~~~ 382 (429)
......|..++. .+.+..++++..+++.++.+.|++.|.+.-+.-|. ..++++|.+++
T Consensus 248 -l~p~~a~l~~~~--l~tl~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~ 321 (400)
T PRK06234 248 -IGPFEAFLIIRG--MKTLQIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKG 321 (400)
T ss_pred -CCHHHHHHHHhc--cCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecC
Confidence 223334444443 34467788888999999999999998775443321 24589999864
No 215
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.81 E-value=7.2e-18 Score=166.09 Aligned_cols=319 Identities=14% Similarity=0.052 Sum_probs=194.8
Q ss_pred Ccccccccc---CCC-h--HHHHHHHHHHcCcC-CCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHH
Q 014163 57 RLNLASFVT---TWM-E--PECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEA 129 (429)
Q Consensus 57 ~~~~~~~~~---~~~-~--~~~~~~~~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a 129 (429)
.++|+.+.| +.. + +.+.+++.+..... ...|....+..++++.+.+|+.+..+...+. ++..+++|+|+++|
T Consensus 28 ~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~-~~i~v~iT~Ga~~a 106 (396)
T PRK09257 28 KVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAA-GRVATVQTPGGTGA 106 (396)
T ss_pred cEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCccccc-CeEEEEecCCccHH
Confidence 366777753 222 2 45778877776543 2356677799999999988887654432111 11113899999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEec-cCCccccCHHHHHHHhhh---CCeE
Q 014163 130 IMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL-EEGYYVMNPVKAVELVDE---NTIC 205 (429)
Q Consensus 130 ~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~-~~~~~~~d~~~l~~~i~~---~~~~ 205 (429)
+.+++.+...- . .+++|++++++|+.+..+++..|++++.+|+ +++++.+|++.++++++. ++.+
T Consensus 107 l~~~~~~l~~~------~-----pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~ 175 (396)
T PRK09257 107 LRVGADFLKRA------F-----PDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAPAGDVV 175 (396)
T ss_pred HHHHHHHHHHh------C-----CCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHHHHHHHhCCCCCEE
Confidence 99888655310 0 2368999999999999999999999999998 444478999999998863 3567
Q ss_pred EEEeeCCCccccc---cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCc--ccc-C-CCCeeEEEEcCccc
Q 014163 206 VAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE--WDF-R-LPLVKSINVSGHKY 278 (429)
Q Consensus 206 v~~~~~~~~tG~~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~--~~~-~-~~~~d~~~~s~hK~ 278 (429)
+++++++||||.+ +.+++|+++|++| ++++++|.+|..+... ...... ..+ . .+++ ++..|.-|.
T Consensus 176 ~i~~~p~NPTG~~~s~~~~~~l~~~a~~~------~~~ii~De~Y~~l~~~-~~~~~~~~~~~~~~~~~v-i~i~SfSK~ 247 (396)
T PRK09257 176 LLHGCCHNPTGADLTPEQWDELAELLKER------GLIPFLDIAYQGFGDG-LEEDAYGLRAFAAAGLEL-LVASSFSKN 247 (396)
T ss_pred EEeCCCCCCCCCCCCHHHHHHHHHHHHhC------CcEEEEeccccccccc-hHHHHHHHHHHHhcCCcE-EEEEEcCCc
Confidence 7779999999998 4577889999999 9999999999874310 000000 011 1 1234 334455665
Q ss_pred CC-CCCCeEEEEE--eCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC--------HHHHHHHHHHH
Q 014163 279 GL-VYAGVGWVVW--RTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG--------FEGYKNIMENC 347 (429)
Q Consensus 279 ~~-~p~g~g~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~--------~~g~~~~~~~~ 347 (429)
++ +++++||+++ .+++.+.............. + .+ ...+.+.++...+. .+.+++..++.
T Consensus 248 ~~~~GlRiG~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~ 318 (396)
T PRK09257 248 FGLYGERVGALSVVAEDAEEADRVLSQLKATIRTN---Y---SN---PPAHGAAIVATILNDPELRAEWEAELEEMRERI 318 (396)
T ss_pred CccccccceeEEEEeCCHHHHHHHHHHHHHHhhhh---c---CC---CcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 54 5899999874 22221111000000000000 0 01 11222333333332 12345567777
Q ss_pred HHHHHHHHHHHHhCC---CeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEe
Q 014163 348 MGNARALREGLEKTG---RFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVIS 424 (429)
Q Consensus 348 ~~~~~~l~~~L~~~~---~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~ 424 (429)
.++++.+.+.|++.+ ++.+.. + ..++++|-- ++. ++...|. .++|+.+.+ . .|+++
T Consensus 319 ~~rr~~l~~~L~~~~~~~~~~~~~-p-~gg~~~w~~-----l~~-~~~~~l~---~~~~V~~~p------~----~ri~~ 377 (396)
T PRK09257 319 KAMRQLLVEALKAKGPSRDFDFIA-R-QRGMFSYSG-----LTP-EQVDRLR---EEFGVYAVG------S----GRINV 377 (396)
T ss_pred HHHHHHHHHHHHhcCCCCCccccc-c-cceEEEecC-----CCH-HHHHHHH---HcCCEEEcC------C----CeEEE
Confidence 889999999999874 244432 3 456665542 222 3333333 278987642 1 18888
Q ss_pred c
Q 014163 425 H 425 (429)
Q Consensus 425 ~ 425 (429)
+
T Consensus 378 ~ 378 (396)
T PRK09257 378 A 378 (396)
T ss_pred e
Confidence 6
No 216
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.81 E-value=9.4e-18 Score=165.97 Aligned_cols=307 Identities=12% Similarity=0.045 Sum_probs=189.0
Q ss_pred CChHHHHHHHHHHcCcCCCCCccC---hhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEY---PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~ 143 (429)
.++|.+.+++.+.+.........+ .+......++.+.+++++|.+. .++.++|++|+..++..+...
T Consensus 60 ~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~~~-------~~~~~sG~~an~~ai~~l~~~--- 129 (407)
T PRK09064 60 GQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLHGKEA-------ALVFTSGYVSNDATLSTLAKL--- 129 (407)
T ss_pred CCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCCCc-------EEEECcHHHHHHHHHHHHhCC---
Confidence 346788888877775532221111 1224444566677889888643 566667788988887776431
Q ss_pred HHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhh----hCCeEEEEeeCCCcccccc
Q 014163 144 KRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD----ENTICVAAILGSTLTGEFE 219 (429)
Q Consensus 144 ~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~----~~~~~v~~~~~~~~tG~~~ 219 (429)
..+..|+.....|.+....++..|+++..++. .|+++|++.++ +++++|+++++.+++|.+.
T Consensus 130 --------~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~------~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~ 195 (407)
T PRK09064 130 --------IPDCVIFSDELNHASMIEGIRRSRCEKHIFRH------NDVAHLEELLAAADPDRPKLIAFESVYSMDGDIA 195 (407)
T ss_pred --------CCCCEEEEeCcchHHHHHHHHHcCCcEEEECC------CCHHHHHHHHHhccCCCCeEEEEeCCCCCCcccc
Confidence 01235555666788887777778877655542 36778888776 4678999999999999999
Q ss_pred ChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCC-CCeeEEEEcCcccCCCCCCeEEEEEeCCCCccc
Q 014163 220 DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRL-PLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPD 298 (429)
Q Consensus 220 ~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~-~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~ 298 (429)
|+++|.++|++| ++++++|+||+.+...-.........+. ...|.++.+..|.++. .| |+++.++ +.. +
T Consensus 196 ~l~~i~~l~~~~------~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~-~G-G~~~~~~-~~~-~ 265 (407)
T PRK09064 196 PIAEICDLADKY------NALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGV-MG-GYIAGSA-ALV-D 265 (407)
T ss_pred CHHHHHHHHHHc------CCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhc-cC-ceEecCH-HHH-H
Confidence 999999999999 9999999999733210000000001111 2468888888997643 34 6665432 221 2
Q ss_pred cccc-ccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEE
Q 014163 299 ELVF-HINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVA 377 (429)
Q Consensus 299 ~~~~-~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~ 377 (429)
.+.. ...|. +..+.+.....+..++++.+... ....++..++++++.+.|++.+ ++++.+ ..+++.
T Consensus 266 ~l~~~~~~~~--------~t~~~~~~~~~aa~~al~~~~~~--~~~~~~~~~~~~~l~~~L~~~g-~~~~~~--~~~iv~ 332 (407)
T PRK09064 266 AVRSYAPGFI--------FTTSLPPAIAAAALASIRHLKES--NEERERHQERAAKLKAALDAAG-IPVMPN--ESHIVP 332 (407)
T ss_pred HHHHhCcccc--------ccCcCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHcC-CCCCCC--CCCEEE
Confidence 1111 11111 11122223344455666655433 3446778899999999999875 776543 456777
Q ss_pred EEecCCCCCCHHHHHHHHHHHHhccCceeccc-CCCCCCCceEEEEEec
Q 014163 378 FSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK-LPMSYPWSTKLRVISH 425 (429)
Q Consensus 378 f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~-~~~~~~~~~~lRi~~~ 425 (429)
+.+.. .....++.+.|. .++|+.++.. .|....+...+|++++
T Consensus 333 i~~~~--~~~~~~l~~~L~---~~~gi~v~~~~~p~~~~~~~~lRis~~ 376 (407)
T PRK09064 333 VMVGD--PEKCKKASDMLL---EEHGIYVQPINYPTVPRGTERLRITPT 376 (407)
T ss_pred EEeCC--HHHHHHHHHHHH---HhCCEEEeeECCCCCCCCCceEEEEeC
Confidence 76532 123445555554 1459998765 4433345567999987
No 217
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.81 E-value=4.7e-18 Score=165.91 Aligned_cols=231 Identities=16% Similarity=0.103 Sum_probs=162.4
Q ss_pred hhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchH----
Q 014163 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC---- 166 (429)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s---- 166 (429)
|...++| +.+++++|.+. .+++++|++|+..++.++.. .+++|+++...|.+
T Consensus 54 p~~~~le----~~la~l~g~~~-------~~~~~sG~~Ai~~al~al~~-------------~Gd~Vl~~~~~~~~t~~~ 109 (380)
T TIGR01325 54 PTVAAFE----ERIAALEGAER-------AVATATGMSAIQAALMTLLQ-------------AGDHVVASRSLFGSTVGF 109 (380)
T ss_pred chHHHHH----HHHHHHhCCCc-------EEEECCHHHHHHHHHHHHhC-------------CCCEEEEecCCcchHHHH
Confidence 3445555 55888999854 67899999999998887644 12578888877753
Q ss_pred HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecc
Q 014163 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (429)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a 246 (429)
+...+...|++++.++.+ |++++++++++++++|++.+++||+|.+.|+++|+++|+++ |++++||++
T Consensus 110 ~~~~~~~~g~~v~~v~~~------d~~~l~~~i~~~tklV~le~p~np~g~~~dl~~I~~la~~~------gi~livD~a 177 (380)
T TIGR01325 110 ISEILPRFGIEVSFVDPT------DLNAWEAAVKPNTKLVFVETPSNPLGELVDIAALAELAHAI------GALLVVDNV 177 (380)
T ss_pred HHHHHHHhCCEEEEECCC------CHHHHHHhcCCCceEEEEECCCCCCCeeeCHHHHHHHHHHc------CCEEEEECC
Confidence 445667789998888753 68899999998999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCCccccCCCCeeEEEEcCcccCCCCC-Ce-EEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhH
Q 014163 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYA-GV-GWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQ 324 (429)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~-g~-g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~ 324 (429)
|+.+.. .. +.. .++|+++.|.+|+++++. .. |+++. +++.. +.+....... |.. ..
T Consensus 178 ~~~~~~--~~---pl~---~g~Divv~S~sK~l~g~g~~~gG~vv~-~~~~~-~~l~~~~~~~----------g~~--~~ 235 (380)
T TIGR01325 178 FATPVL--QQ---PLK---LGADVVVYSATKHIDGQGRVMGGVIAG-SEELM-AEVAVYLRHT----------GPA--MS 235 (380)
T ss_pred Cccccc--CC---chh---hCCCEEEeeccceecCCCCeEEEEEEe-CHHHH-HHHHHHHHhh----------CCC--CC
Confidence 975321 11 111 258999999999987653 34 55543 33322 2211111101 111 12
Q ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC----------------CceEEEEEec
Q 014163 325 IIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV----------------GVPLVAFSLK 381 (429)
Q Consensus 325 ~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----------------~~~~v~f~~~ 381 (429)
...+|.+++ +.+.+..++++..+++.++.+.|+++|.++-+..|. ..++++|.++
T Consensus 236 p~~a~~~l~--~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~ 306 (380)
T TIGR01325 236 PFNAWVLLK--GLETLSLRMQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVA 306 (380)
T ss_pred HHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEC
Confidence 223344443 345567788999999999999999999776433221 2468999986
No 218
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.81 E-value=5.7e-18 Score=166.95 Aligned_cols=245 Identities=16% Similarity=0.072 Sum_probs=166.1
Q ss_pred ChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHH
Q 014163 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (429)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~ 169 (429)
.|...++| +.++++.|.+. .++|++|++|+.+++.++.. .+++||++...|.+...
T Consensus 63 ~p~~~~le----~~lA~l~g~~~-------av~~sSGt~Al~~al~~ll~-------------~Gd~Vi~~~~~y~~t~~ 118 (433)
T PRK08134 63 NPTVAVLE----ERVAALEGGVG-------AIATASGQAALHLAIATLMG-------------AGSHIVASSALYGGSHN 118 (433)
T ss_pred ChHHHHHH----HHHHHHhCCCc-------EEEeCCHHHHHHHHHHHHhC-------------CCCEEEEeCCccHHHHH
Confidence 34555555 45889999864 78999999999998887633 23689999998876544
Q ss_pred H----HHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeec
Q 014163 170 F----ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (429)
Q Consensus 170 ~----~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~ 245 (429)
+ +...|+++++++++ |+++++++|+++|++|++.+++|++|.+.|+++|+++|+++ |++++||+
T Consensus 119 ~~~~~l~~~Gi~v~~vd~~------d~~~l~~~i~~~TklV~~e~~~np~g~v~Di~~I~~la~~~------gi~livD~ 186 (433)
T PRK08134 119 LLHYTLRRFGIETTFVKPG------DIDGWRAAIRPNTRLLFGETLGNPGLEVLDIPTVAAIAHEA------GVPLLVDS 186 (433)
T ss_pred HHHHHHhhCCeEEEEECCC------CHHHHHHhcCCCCeEEEEECCCcccCcccCHHHHHHHHHHc------CCEEEEEC
Confidence 3 34579999998863 78999999999999999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCC-eEEEEEeCCCCc-cc--cc-ccccCCCCC--C--CC----
Q 014163 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG-VGWVVWRTKDDL-PD--EL-VFHINYLGS--D--QP---- 312 (429)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g-~g~l~~~~~~~~-~~--~~-~~~~~~~~~--~--~~---- 312 (429)
+++.+.. .. + + ..++|.+++|+|||++++.. +|.+++...... .. .+ .....+.+. . ..
T Consensus 187 t~a~~~~---~~--p--l-~~GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 258 (433)
T PRK08134 187 TFTTPYL---LR--P--F-EHGADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAEESTV 258 (433)
T ss_pred CCccccc---CC--c--h-hcCCCEEEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhhccch
Confidence 9975432 11 1 1 13699999999999876543 455555322110 00 00 000111000 0 00
Q ss_pred -Cc---------eeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC-----------
Q 014163 313 -TF---------TLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV----------- 371 (429)
Q Consensus 313 -~~---------~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----------- 371 (429)
.+ ...|.. ......|..+ .+.+.+..++++..+++..+.+.|+++|.+.-+..|.
T Consensus 259 ~~~~~~~~~~~~~~~G~~--ls~~~A~l~~--~gL~tl~~R~~~~~~nA~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~ 334 (433)
T PRK08134 259 AAFLLRARREGLRDFGAC--LSPMNAWQLL--QGIETLPLRMERHVANTRKVVAFLASHPAVARVAHPELESHPDHALAK 334 (433)
T ss_pred hHHHHHHHHHHHHhcCCC--CCHHHHHHHh--cCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHH
Confidence 00 000111 1222233333 3556689999999999999999999999775443221
Q ss_pred ------CceEEEEEecC
Q 014163 372 ------GVPLVAFSLKD 382 (429)
Q Consensus 372 ------~~~~v~f~~~~ 382 (429)
..++++|.+++
T Consensus 335 ~~~~~g~gg~~s~~l~~ 351 (433)
T PRK08134 335 RLLPRGAGSVFSFDLKG 351 (433)
T ss_pred HhCCCCCceEEEEEecC
Confidence 24688999864
No 219
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.81 E-value=6.8e-18 Score=162.50 Aligned_cols=292 Identities=15% Similarity=0.148 Sum_probs=187.6
Q ss_pred cccccccCC-ChHHHHHHHHHHcCc-CCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHH
Q 014163 59 NLASFVTTW-MEPECDKLVMASINK-NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLA 136 (429)
Q Consensus 59 ~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a 136 (429)
+|....++. +++.+.+.+.+++.. +...|. .++..++++ ++++++|++++ .+++|+|+++++.+.+.+
T Consensus 22 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~-~~g~~~lr~----~ia~~~~~~~~-----~I~~t~G~~~~l~~~~~~ 91 (337)
T PRK03967 22 WLDKNENPFDLPEELKEEIFEELKRVPFNRYP-HITSDPLRE----AIAEFYGLDAE-----NIAVGNGSDELISYLVKL 91 (337)
T ss_pred EecCCCCCCCCCHHHHHHHHHHhhcCccccCC-CCCHHHHHH----HHHHHhCcCcc-----eEEEcCCHHHHHHHHHHH
Confidence 344444443 446677777776653 333443 345555554 46677777652 388999999998766554
Q ss_pred HHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccc
Q 014163 137 FKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (429)
Q Consensus 137 ~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG 216 (429)
+ . ++.|+++.++|..+..+++..|++++.++++++ +.+|++.+++.+ ++++++++++|+||||
T Consensus 92 ~-~--------------gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~d~~~l~~~~-~~~~~v~~~~P~NPtG 154 (337)
T PRK03967 92 F-E--------------GKHIVITPPTFGMYSFYAKLNGIPVIDVPLKED-FTIDGERIAEKA-KNASAVFICSPNNPTG 154 (337)
T ss_pred h-C--------------CCeEEEeCCChHHHHHHHHHcCCeEEEeecCCC-CCcCHHHHHHhc-cCCCEEEEeCCCCCCC
Confidence 3 1 268999999999888888999999999998765 789999999875 5678888999999999
Q ss_pred cccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcccc-CCCCeeEEEEcCcccCC-CCCCeEEEEEeCCC
Q 014163 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKSINVSGHKYGL-VYAGVGWVVWRTKD 294 (429)
Q Consensus 217 ~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~d~~~~s~hK~~~-~p~g~g~l~~~~~~ 294 (429)
.+.+.++|.+++ ++ ++++++|++|..+.- ....... ..+++ .+..|.-|.++ ++.++||++..+ +
T Consensus 155 ~~~~~~~l~~i~-~~------~~~ii~De~y~~~~~----~~~~~~~~~~~~v-i~l~S~SK~~~l~GlRiG~iv~~~-~ 221 (337)
T PRK03967 155 NLQPEEEILKVL-ET------GKPVVLDEAYAEFSG----KSLIGLIDEYPNL-ILLRTFSKAFGLAGIRAGYAIANE-E 221 (337)
T ss_pred CCCCHHHHHHHH-hc------CCEEEEECchhhhcc----cchHHHHhhCCCE-EEEecchHhhcchhhhheeeecCH-H
Confidence 999999999999 48 899999999986421 1100001 11233 34446667654 889999998632 2
Q ss_pred CcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCc
Q 014163 295 DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-FEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGV 373 (429)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~-~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 373 (429)
+.+.+..... .+ + ...+++.++...+. .+.+.+..++..+.++.+.+.|.+.. . +...
T Consensus 222 -~i~~~~~~~~-------~~----~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~-----~-~~~~ 280 (337)
T PRK03967 222 -IIDALYRIKP-------PF----S---LNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGEYA-----Y-PSDA 280 (337)
T ss_pred -HHHHHHhhcC-------CC----C---CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhccCc-----C-CCCC
Confidence 2222211110 01 1 12334444444442 33455556666777788888887642 1 2234
Q ss_pred eEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEeccc
Q 014163 374 PLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHLR 427 (429)
Q Consensus 374 ~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~~ 427 (429)
+.+.+++ .+.+.|. ++|+.++.+. . ....++|++++++
T Consensus 281 ~~~~~~~---------~~~~~l~----~~gi~v~~~~-~--~~~~~~Ri~~~~~ 318 (337)
T PRK03967 281 NFLLLKL---------DAYDYLL----ENGIVVRKLS-G--RLEGHIRVTVGKR 318 (337)
T ss_pred cEEEEhH---------HHHHHHH----HCCEEEEeCC-C--CCCCeEEEecCCH
Confidence 4443332 2456666 8999887542 1 2345799999864
No 220
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.81 E-value=6.5e-18 Score=164.54 Aligned_cols=229 Identities=17% Similarity=0.028 Sum_probs=162.5
Q ss_pred HHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHH----HHhc
Q 014163 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF----ARYF 174 (429)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~----~~~~ 174 (429)
++.+.++++.|.+. +.+++|+++|+.+++.++.. .+++|+++.+.|.+.... +...
T Consensus 55 ~le~~lA~l~g~~~-------v~~~~gg~~Ai~~~l~all~-------------~GD~Vl~~~p~y~~~~~~~~~~~~~~ 114 (382)
T TIGR02080 55 LLQQALAELEGGAG-------AVVTNTGMSAIHLVTTALLG-------------PDDLLVAPHDCYGGTYRLLNALAKKG 114 (382)
T ss_pred HHHHHHHHHhCCCc-------EEEEcCHHHHHHHHHHHHcC-------------CCCEEEEcCCCcHHHHHHHHHHHhhc
Confidence 34455888888532 88999999999998888754 236899999999854332 2333
Q ss_pred CceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccc
Q 014163 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (429)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (429)
|+++..++ ..|+++++++++++|++|++++|+||||.+.|+++|+++|+++ |+++++|++|+.+..
T Consensus 115 ~~~v~~~d------~~d~~~l~~ai~~~tklV~l~~p~NPtG~~~dl~~I~~la~~~------g~~vvvD~a~~~~~~-- 180 (382)
T TIGR02080 115 CFRVLFVD------QGDEQALRAALAQKPKLVLIETPSNPLLRVVDIAKICHLAKAV------GAVVVVDNTFLSPAL-- 180 (382)
T ss_pred CeEEEEEC------CCCHHHHHHhcCcCceEEEEECCCCCCCEecCHHHHHHHHHHc------CCEEEEECCCccccc--
Confidence 45555543 1478999999999999999999999999999999999999999 999999999975432
Q ss_pred cCCCCccccCCCCeeEEEEcCcccCCCCCC--eEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHH
Q 014163 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (429)
Q Consensus 255 ~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al 332 (429)
.. ... .++|.++.|.+||+.++.+ .|++++++++.. +.+.....+.+.. ...+..|..+
T Consensus 181 -~~--pl~---~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~-~~l~~~~~~~g~~------------~sp~~a~l~l 241 (382)
T TIGR02080 181 -QN--PLA---LGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVA-EELAWWANNLGVT------------GGAFDSYLTL 241 (382)
T ss_pred -CC--chh---hCCCEEEeecceeccCCCCceeEEEEeCCHHHH-HHHHHHHHccCCC------------CCHHHHHHHH
Confidence 11 111 2579999999999987776 677666554322 2222222222211 2333455555
Q ss_pred HHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC----------------CceEEEEEecC
Q 014163 333 IRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV----------------GVPLVAFSLKD 382 (429)
Q Consensus 333 ~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----------------~~~~v~f~~~~ 382 (429)
+ +.+.+..++++..+++..+.++|++.|.++-+.-|. ..++++|.+++
T Consensus 242 r--~l~tl~~R~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~ 305 (382)
T TIGR02080 242 R--GLRTLVARMRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKG 305 (382)
T ss_pred c--ccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecC
Confidence 4 345677778899999999999999999876443321 24589999863
No 221
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.81 E-value=3e-18 Score=167.00 Aligned_cols=229 Identities=17% Similarity=0.036 Sum_probs=163.8
Q ss_pred HHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHH----HHHhc
Q 014163 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK----FARYF 174 (429)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~----~~~~~ 174 (429)
++.++++++.|.+. .++++||++|+.+++.++.. .+++|+++.+.|.+... .+...
T Consensus 56 ~L~~~lA~l~g~~~-------~i~~~sg~~Ai~~~l~~l~~-------------~GD~Vl~~~~~y~~~~~~~~~~~~~~ 115 (386)
T PRK08045 56 VVQRALAELEGGAG-------AVLTNTGMSAIHLVTTVFLK-------------PGDLLVAPHDCYGGSYRLFDSLAKRG 115 (386)
T ss_pred HHHHHHHHHhCCCe-------EEEECCHHHHHHHHHHHHcC-------------CCCEEEEcCCCcHHHHHHHHHHHhhC
Confidence 34455888888642 88999999999988887654 23689999999885332 22334
Q ss_pred CceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccc
Q 014163 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (429)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (429)
|+++..++ ..|+++++++++++|++|++++|+||||.+.|+++|.++|+++ |+++++|++|+.+..
T Consensus 116 gi~v~~vd------~~d~e~l~~~l~~~tklV~l~sP~NPtG~v~di~~I~~ia~~~------g~~vivDeay~~~~~-- 181 (386)
T PRK08045 116 CYRVLFVD------QGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLAREA------GAVSVVDNTFLSPAL-- 181 (386)
T ss_pred CeEEEEeC------CCCHHHHHHhcccCCeEEEEECCCCCCCEecCHHHHHHHHHHc------CCEEEEECCCCcccc--
Confidence 45665553 2689999999999999999999999999999999999999999 999999999976432
Q ss_pred cCCCCccccCCCCeeEEEEcCcccCCCCCC--eEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHH
Q 014163 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (429)
Q Consensus 255 ~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al 332 (429)
.. +.. .++|.++.|.+||++++.+ .|+++.++++.. +.+.....+.+.. ......|.++
T Consensus 182 -~~--pl~---~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~-~~l~~~~~~~g~~------------~~p~~~~l~~ 242 (386)
T PRK08045 182 -QN--PLA---LGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVV-TELAWWANNIGVT------------GGAFDSYLLL 242 (386)
T ss_pred -CC--chh---hCCCEEEeecceeccCCCCceeEEEEeCcHHHH-HHHHHHHHhcCCC------------CCHHHHHHHH
Confidence 11 111 2689999999999987776 577666544322 2222112222111 2344567666
Q ss_pred HHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC----------------CceEEEEEecC
Q 014163 333 IRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV----------------GVPLVAFSLKD 382 (429)
Q Consensus 333 ~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----------------~~~~v~f~~~~ 382 (429)
+.+. .+..++++..+++..+.+.|++.|.++-+.-|. ..++++|.+++
T Consensus 243 rgl~--tl~~R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~ 306 (386)
T PRK08045 243 RGLR--TLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG 306 (386)
T ss_pred hhhc--cHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecC
Confidence 5553 488899999999999999999999875443221 24589999863
No 222
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.81 E-value=6.7e-18 Score=163.44 Aligned_cols=234 Identities=15% Similarity=0.030 Sum_probs=169.3
Q ss_pred cChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHH
Q 014163 89 EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE 168 (429)
Q Consensus 89 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~ 168 (429)
..|....||+. ++++-|.+. ..++++|+.|+..++.++.. .+++|+++...|..+.
T Consensus 60 ~nPt~~~le~~----la~LEg~~~-------a~~~~SGmaAi~~~~~~ll~-------------~GD~Vv~~~~~Yg~t~ 115 (395)
T PRK08114 60 GTLTHFSLQEA----MCELEGGAG-------CALYPCGAAAVANAILAFVE-------------QGDHVLMTGTAYEPTQ 115 (395)
T ss_pred CChhHHHHHHH----HHHHhCCCe-------EEEEhHHHHHHHHHHHHHcC-------------CCCEEEEeCCCcHHHH
Confidence 45677777765 788888754 77888899999988887754 2368999888887655
Q ss_pred HH----HHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCC--ccEE
Q 014163 169 KF----ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWD--TPIH 242 (429)
Q Consensus 169 ~~----~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~--~~l~ 242 (429)
.. ++..|+++++++. .|.++++++|+++|++|++.+++|++|.+.|+++|+++||++ + ++++
T Consensus 116 ~l~~~~l~~~Gi~v~~vd~------~d~~~l~~~l~~~TrlV~~EtpsNp~~~v~DI~~Ia~ia~~~------g~g~~lv 183 (395)
T PRK08114 116 DFCSKILSKLGVTTTWFDP------LIGADIAKLIQPNTKVVFLESPGSITMEVHDVPAIVAAVRSV------NPDAVIM 183 (395)
T ss_pred HHHHHHHHhcCcEEEEECC------CCHHHHHHhcCCCceEEEEECCCCCCCEeecHHHHHHHHHHh------CCCCEEE
Confidence 44 4567999888863 367889999999999999999999999999999999999998 5 9999
Q ss_pred eecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCC--CeEEEEEeCCCCcccccccccCCCCCCCCCceeccCC
Q 014163 243 VDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYA--GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSK 320 (429)
Q Consensus 243 vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~--g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr 320 (429)
||++++.+.. .. ....++|++..|+|||++++. +.|+++.+ ++.. +.+....... |.-
T Consensus 184 VDnT~a~p~~--~~------pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~-~~~~-~~l~~~~~~~----------G~~ 243 (395)
T PRK08114 184 IDNTWAAGVL--FK------ALDFGIDISIQAGTKYLVGHSDAMIGTAVAN-ARCW-EQLRENSYLM----------GQM 243 (395)
T ss_pred EECCCccccc--cC------HHHcCCcEEEEcCcccccCCCcceeEEEEcC-HHHH-HHHHHHHHhc----------cCC
Confidence 9999986432 11 111379999999999999986 55755433 2211 1111111111 211
Q ss_pred chhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEE-eeCC---------------CCceEEEEEecC
Q 014163 321 GSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEI-LSKD---------------VGVPLVAFSLKD 382 (429)
Q Consensus 321 ~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~---------------~~~~~v~f~~~~ 382 (429)
......|..+ .|.+.+.-++++..+++..+.++|+++|.++- ..|. ...++++|.+++
T Consensus 244 --~~p~~a~l~~--rgl~TL~lR~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~ 317 (395)
T PRK08114 244 --VDADTAYMTS--RGLRTLGVRLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKK 317 (395)
T ss_pred --CCHHHHHHHH--cCCCcHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecC
Confidence 2344455444 34566788999999999999999999998764 4332 124699999864
No 223
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.81 E-value=1.9e-17 Score=163.28 Aligned_cols=245 Identities=18% Similarity=0.125 Sum_probs=167.9
Q ss_pred ChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchH---
Q 014163 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC--- 166 (429)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s--- 166 (429)
.|....||+. ++++.|.+. .+++++|+.|+..++.++.. .+++|+++.+.|..
T Consensus 63 ~p~~~~Le~~----lA~leg~~~-------al~~~sG~~Ai~~al~~ll~-------------~GD~Vlv~~~~y~~t~~ 118 (431)
T PRK08248 63 NPTTDVFEKR----IAALEGGIG-------ALAVSSGQAAITYSILNIAS-------------AGDEIVSSSSLYGGTYN 118 (431)
T ss_pred CchHHHHHHH----HHHHhCCCc-------EEEECCHHHHHHHHHHHHhC-------------CCCEEEEccCchhhHHH
Confidence 4555666654 889998754 88999999999988887644 23689999887753
Q ss_pred -HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeec
Q 014163 167 -WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (429)
Q Consensus 167 -~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~ 245 (429)
+...++..|++++.++. .|++++++++++++++|++++++||+|.+.|+++|+++|+++ ++++++|+
T Consensus 119 ~~~~~~~~~Gv~v~~vd~------~d~e~l~~ai~~~tklV~l~sp~NPtG~v~di~~I~~la~~~------gi~vIvD~ 186 (431)
T PRK08248 119 LFAHTLPKLGITVKFVDP------SDPENFEAAITDKTKALFAETIGNPKGDVLDIEAVAAIAHEH------GIPLIVDN 186 (431)
T ss_pred HHHHHHHhCCEEEEEECC------CCHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHc------CCEEEEeC
Confidence 44556778999988875 378999999999999999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCCccccCCCCeeEEEEcCcccCCCCC-CeEEEEEeCCCCccc---c---c-ccccCCCCC---C-C--
Q 014163 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYA-GVGWVVWRTKDDLPD---E---L-VFHINYLGS---D-Q-- 311 (429)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~-g~g~l~~~~~~~~~~---~---~-~~~~~~~~~---~-~-- 311 (429)
+++... ... + + ..++|.++.|+|||++++. .+|.+++.+.+.... . + .....|... . .
T Consensus 187 t~a~~~---~~~--p--l-~~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (431)
T PRK08248 187 TFASPY---LLR--P--I-EHGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGE 258 (431)
T ss_pred CCCccc---cCC--h--h-HcCCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhch
Confidence 987422 111 1 1 1369999999999998765 367766654321100 0 0 000000000 0 0
Q ss_pred CC---------ceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC-----------
Q 014163 312 PT---------FTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV----------- 371 (429)
Q Consensus 312 ~~---------~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----------- 371 (429)
.. ....|.. ......|..+ -|.+.+..++++..+++..+.+.|+++|.++-+..|.
T Consensus 259 ~~~~~~~~~~~~~~~G~~--l~p~~a~l~~--rgl~tl~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~ 334 (431)
T PRK08248 259 AAYITKARVQLLRDLGAA--LSPFNSFLLL--QGLETLHLRMERHSENALAVAKFLEEHEAVEWVSYPGLPSHPSYELAK 334 (431)
T ss_pred hhHHHHHHHHHHHhcCCC--CCHHHHHHHh--cCcCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHH
Confidence 00 0000111 1222334333 3456678899999999999999999999876443320
Q ss_pred ------CceEEEEEecC
Q 014163 372 ------GVPLVAFSLKD 382 (429)
Q Consensus 372 ------~~~~v~f~~~~ 382 (429)
..++++|.+++
T Consensus 335 ~~~~~g~gg~~sf~l~~ 351 (431)
T PRK08248 335 KYLPKGQGAILTFGIKG 351 (431)
T ss_pred HhCcCCCceEEEEEecC
Confidence 14589999864
No 224
>PRK08637 hypothetical protein; Provisional
Probab=99.81 E-value=7.5e-18 Score=165.45 Aligned_cols=310 Identities=10% Similarity=0.018 Sum_probs=185.8
Q ss_pred HHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhC-CCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhc
Q 014163 70 PECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFN-TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (429)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g-~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~ 148 (429)
+.+.+++..........|....+..++++.+.+++.+..+ ...+. ...+++|+|+++++.+++.++.+
T Consensus 23 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~--~~~I~it~G~~~al~~~~~~l~~--------- 91 (388)
T PRK08637 23 SSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKK--MSLPIVTNALTHGLSLVADLFVD--------- 91 (388)
T ss_pred HHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCccccccc--cceeeEccchHHHHHHHHHHhcC---------
Confidence 3344444432223344566667888888887777766432 22111 12368999999999988887754
Q ss_pred CCCCCCcEEEEcCCCchHHHHHH-HhcCceeEEEeccCCccccCHHHHHHHhh----hCCeEEEEeeCCCccccc---cC
Q 014163 149 GKPYDKPNIVTGANVQVCWEKFA-RYFEVELKEVKLEEGYYVMNPVKAVELVD----ENTICVAAILGSTLTGEF---ED 220 (429)
Q Consensus 149 g~~~~~~~vi~~~~~h~s~~~~~-~~~G~~v~~v~~~~~~~~~d~~~l~~~i~----~~~~~v~~~~~~~~tG~~---~~ 220 (429)
.++.|+++.|+|+.+..++ ...|++++.+|+..+++.+|+++++++++ +.+.++++++|+||||.+ +.
T Consensus 92 ----~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~ 167 (388)
T PRK08637 92 ----QGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKE 167 (388)
T ss_pred ----CCCEEEEcCCCCccHHHHHHHhcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHH
Confidence 2368999999999988865 46899999999842225699999999987 445667788899999988 45
Q ss_pred hHHHHHHHHH-----hhhccCCCccEEeecccccccccccCCCCcc----cc-C-CCCeeEEE--EcCcccCCCCCCeEE
Q 014163 221 VKLLHDLLTK-----KNEETGWDTPIHVDAASGGFIAPFLYPDLEW----DF-R-LPLVKSIN--VSGHKYGLVYAGVGW 287 (429)
Q Consensus 221 l~~I~~la~~-----~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~----~~-~-~~~~d~~~--~s~hK~~~~p~g~g~ 287 (429)
+++|+++|++ | ++++++|++|..+.. .+.... .+ . .+++.++. ..++++++++.++||
T Consensus 168 ~~~l~~~~~~~~~~~~------~~~iI~De~Y~~l~~---~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~ 238 (388)
T PRK08637 168 ATAIVEAIKELADAGT------KVVAVVDDAYFGLFY---EDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGF 238 (388)
T ss_pred HHHHHHHHHHHHhcCC------cEEEEecccchhccc---CCccchhhHHHhhcccccceEEEeccccccCCCcccceEE
Confidence 6677777775 7 999999999987431 111110 11 1 12333333 456668999999999
Q ss_pred EEEeC----CCCccccccccc-CCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHH----HHHHHHHHHHHHHHH
Q 014163 288 VVWRT----KDDLPDELVFHI-NYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNI----MENCMGNARALREGL 358 (429)
Q Consensus 288 l~~~~----~~~~~~~~~~~~-~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~----~~~~~~~~~~l~~~L 358 (429)
+++.. ++.+.+.+.... ....... . ....+.+.++...+....+.+. .....++++.+.+.|
T Consensus 239 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~------~---~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l 309 (388)
T PRK08637 239 ITFGTKAGSSQTVKEALEKKVKGLIRSNI------S---NGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVL 309 (388)
T ss_pred EEEccccCCcHHHHHHHHHHHHHHhhccc------C---CCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98643 111111111100 0000000 0 1223345555555543333333 334555666677777
Q ss_pred HhCC---CeEEeeCCCCceEEEE-EecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEecc
Q 014163 359 EKTG---RFEILSKDVGVPLVAF-SLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHL 426 (429)
Q Consensus 359 ~~~~---~~~~~~~~~~~~~v~f-~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~ 426 (429)
++.+ ++.+.. + ..+++.| +++ +.+..++.+.|. .++|+.+... +..++|++++.
T Consensus 310 ~~~~~~~~~~~~~-~-~~g~~~~~~l~---~~~~~~l~~~l~---~~~gv~~~~~------~~~~iRi~~~~ 367 (388)
T PRK08637 310 YDGKYDDAWQAYP-F-NSGYFMCLKLK---GVDAEELRVHLL---EKYGIGTIAL------NETDLRIAFSC 367 (388)
T ss_pred HhhCCCCCccccc-c-cceEEEEecCC---hHHHHHHHHHHh---hhcceEEEec------cCCceEEEeec
Confidence 6652 355443 2 3555544 542 234556666663 1579876521 23469999975
No 225
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.81 E-value=8.3e-18 Score=164.49 Aligned_cols=231 Identities=16% Similarity=0.116 Sum_probs=160.8
Q ss_pred hhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchH----
Q 014163 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC---- 166 (429)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s---- 166 (429)
|...++| +.++++.|.+. .+.+++|+.|+..++. +.. .+++|+++++.|.+
T Consensus 54 p~~~~le----~~lA~l~g~~~-------~v~~~sG~~ai~~~l~-~l~-------------~Gd~Vlv~~~~y~~~~~~ 108 (390)
T PRK08064 54 PTREALE----DIIAELEGGTK-------GFAFASGMAAISTAFL-LLS-------------KGDHVLISEDVYGGTYRM 108 (390)
T ss_pred hhHHHHH----HHHHHHhCCCC-------eEEECCHHHHHHHHHH-HhC-------------CCCEEEEccCccchHHHH
Confidence 4455554 55899999864 4566777778776664 322 13689999988863
Q ss_pred HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecc
Q 014163 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (429)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a 246 (429)
+...++..|++++.++.+ |+++++++++++|++|++++|+||+|.+.|+++|.++|+++ ++++++|++
T Consensus 109 ~~~~~~~~G~~v~~v~~~------d~~~l~~~l~~~tklV~l~~p~NptG~~~dl~~I~~la~~~------g~~vvvD~a 176 (390)
T PRK08064 109 ITEVLSRFGIEHTFVDMT------NLEEVAQNIKPNTKLFYVETPSNPLLKVTDIRGVVKLAKAI------GCLTFVDNT 176 (390)
T ss_pred HHHHHHHcCCEEEEECCC------CHHHHHHhcCCCceEEEEECCCCCCcEeccHHHHHHHHHHc------CCEEEEECC
Confidence 345667789999998752 68999999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCCccccCCCCeeEEEEcCcccCCCCCC--eEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhH
Q 014163 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQ 324 (429)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~ 324 (429)
|+.+.. .. ..+ .++|+++.|+|||+.++.+ .|++++++++.. +.+....... |.. ..
T Consensus 177 ~~~~~~---~~--~~~---~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~-~~l~~~~~~~----------g~~--~~ 235 (390)
T PRK08064 177 FLTPLL---QK--PLD---LGADVVLHSATKFLAGHSDVLAGLAVVKDEELA-QKLYFLQNSF----------GAV--LG 235 (390)
T ss_pred CCcccc---cC--chh---hCCcEEEeecceeccCCccceeEEEEeCCHHHH-HHHHHHHHhc----------CCC--CC
Confidence 975432 11 111 2589999999999988877 477776654322 2211111100 111 12
Q ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeE-EeeCC---------------CCceEEEEEec
Q 014163 325 IIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKD---------------VGVPLVAFSLK 381 (429)
Q Consensus 325 ~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~ 381 (429)
....|..+ .+...+..++++..+++..+.+.|++.|.+. +..+. ...++++|.+.
T Consensus 236 ~~~a~l~~--~gl~tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~ 306 (390)
T PRK08064 236 VQDCWLVL--RGLKTLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQ 306 (390)
T ss_pred HHHHHHHH--cccCcHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEEC
Confidence 22333333 3444577888999999999999999988653 33331 13458999985
No 226
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.80 E-value=5.6e-18 Score=162.23 Aligned_cols=316 Identities=14% Similarity=0.125 Sum_probs=193.0
Q ss_pred CChHHHHHHHHHHcCcCCC-------CCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYV-------DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~ 139 (429)
..+|.+.+++.+.+.+-+. .|..-....++|+-+.+.++++||++++. ....+-..+|+.||+.++.++.+
T Consensus 31 ~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~~~--w~anvqp~SGs~An~av~~aLl~ 108 (399)
T PF00464_consen 31 YMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEPKE--WYANVQPHSGSQANLAVYMALLK 108 (399)
T ss_dssp ---HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-STTT--EEEE---SSHHHHHHHHHHHHT-
T ss_pred ccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCccc--ceEEeecCCchHHHHHHHHHHHh
Confidence 3457777777666654322 12233467899999999999999998531 12344556999999999998876
Q ss_pred HHHHHHHhcCCCCCCcEEEE---cCCCchHHHHHHHh-------cCceeEEEeccCCccccCHHHHHHHhhh-CCeEEEE
Q 014163 140 KWQQKRKEQGKPYDKPNIVT---GANVQVCWEKFARY-------FEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAA 208 (429)
Q Consensus 140 ~~~~~~~~~g~~~~~~~vi~---~~~~h~s~~~~~~~-------~G~~v~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~ 208 (429)
+ ++.|+. +...|.+....... ...+....+++++++.+|.+++++.+.+ +|++|+
T Consensus 109 p-------------GD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi- 174 (399)
T PF00464_consen 109 P-------------GDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLII- 174 (399)
T ss_dssp T-------------T-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEE-
T ss_pred h-------------cCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEE-
Confidence 2 256664 33456654443333 2345666778866789999999999886 677654
Q ss_pred eeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEE
Q 014163 209 ILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWV 288 (429)
Q Consensus 209 ~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l 288 (429)
..+++.. ...|++++.++|++. |+++++|++|-.++. .....+- .++.+|+++++.||.+.+|.| |++
T Consensus 175 ~G~S~y~-~~~d~~~~reIad~v------ga~l~~D~sH~~GLI--a~g~~~~--P~~~ADvvt~sThKtl~GPrg-giI 242 (399)
T PF00464_consen 175 CGASSYP-RPIDFKRFREIADEV------GAYLMADISHIAGLI--AGGLFPN--PFPYADVVTGSTHKTLRGPRG-GII 242 (399)
T ss_dssp EE-SSTS-S---HHHHHHHHHHT------T-EEEEE-TTTHHHH--HTTSS----GCCTSSEEEEESSGGG-SSS--EEE
T ss_pred ECchhcc-CccCHHHHHHHHHhc------CcEEEecccccccce--ehheecC--ccccceEEEeeccccccccCc-eEE
Confidence 4444443 345799999999999 999999999955433 1111111 134699999999999988876 787
Q ss_pred EEeCCC------------CcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH
Q 014163 289 VWRTKD------------DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALRE 356 (429)
Q Consensus 289 ~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~ 356 (429)
++++.. .+.+.+. ..- .+.++|++....+.++..+++......++++.++..++++.|.+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~l~~~I~-~av-------fP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~qVv~NAk~La~ 314 (399)
T PF00464_consen 243 LTNKGSKNVDKKGKEIDEELAEKID-SAV-------FPGLQGGPHMHRIAALAVALKEALSPEFKEYAKQVVKNAKALAE 314 (399)
T ss_dssp EES-SEEEE-TTS-EEEHHHHHHHH-HHH-------TTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHH
T ss_pred EEcCCccccCCcccccHHHHHHHhc-ccc-------CCCcccCcchhHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHH
Confidence 876210 0000000 000 11223455456677777888776666679999999999999999
Q ss_pred HHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceeccc-CCCCC--CCceEEEEEe
Q 014163 357 GLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK-LPMSY--PWSTKLRVIS 424 (429)
Q Consensus 357 ~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~-~~~~~--~~~~~lRi~~ 424 (429)
.|.+.+ ++++....+.+.+.+.+.+. +++..++.+.|. +.||.++.. .|.+. .....||+..
T Consensus 315 ~L~~~G-~~v~~ggTd~H~vlvd~~~~-~~~g~~a~~~Le----~~gI~vnkn~iP~d~~~~~~sGlRlGT 379 (399)
T PF00464_consen 315 ALQERG-FKVVTGGTDNHQVLVDLRSF-GIDGKEAEKALE----EAGIIVNKNTIPGDRSPFVPSGLRLGT 379 (399)
T ss_dssp HHHHTT--EEGGGS-SSSEEEEEGGGG-TS-HHHHHHHHH----HTTEE-EEE--TTTSTTTT-SEEEEES
T ss_pred HHhhCC-cEEEECCCCCCeEEEEeccc-ccchHHHHHHHH----hcCeeecccccCCCCCCCCCCEEEECC
Confidence 999987 99987544788999988643 567788888888 999998754 44431 1235799865
No 227
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.80 E-value=2.1e-17 Score=161.39 Aligned_cols=291 Identities=10% Similarity=0.050 Sum_probs=180.0
Q ss_pred HHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCC
Q 014163 72 CDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKP 151 (429)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~ 151 (429)
..+++.+.+..++. +...+ +.+++.+++++++|.+. .++++||++|+.+++.++.-.
T Consensus 13 ~~~~~~~~l~~~~~-~g~~~----~~~~~e~~la~~~g~~~-------~v~~~sgt~al~~~l~~~~~~----------- 69 (375)
T PRK11706 13 ELDYIQQAMSSGKL-CGDGG----FTRRCQQWLEQRFGSAK-------VLLTPSCTAALEMAALLLDIQ----------- 69 (375)
T ss_pred HHHHHHHHHHcCCc-cCCCH----HHHHHHHHHHHHhCCCe-------EEEECCHHHHHHHHHHHhCCC-----------
Confidence 34555666554432 11122 34455566888888864 889999999998877655211
Q ss_pred CCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHh
Q 014163 152 YDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKK 231 (429)
Q Consensus 152 ~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~ 231 (429)
.+++|+++.++|.++..++...|++++.++++++++.+|+++++++++++|++|++++ ++|...++++|.++|+++
T Consensus 70 -~Gd~Viv~~~t~~~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~~tk~i~~~~---~~G~~~~~~~i~~la~~~ 145 (375)
T PRK11706 70 -PGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITPKTRAIVPVH---YAGVACEMDTIMALAKKH 145 (375)
T ss_pred -CCCEEEECCCCcHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCCCCeEEEEeC---CCCCccCHHHHHHHHHHc
Confidence 2368999999999999999999999999999876678999999999999999888664 589999999999999999
Q ss_pred hhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCC-----
Q 014163 232 NEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINY----- 306 (429)
Q Consensus 232 ~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~----- 306 (429)
++++++|+||+.+.. ....... ....+.++++...|.+.++.| |.+++.+++.. ..+......
T Consensus 146 ------~i~vIeD~a~a~g~~--~~~~~~g--~~~~~~~~Sf~~~K~l~~g~g-G~~~~~~~~~~-~~~~~~~~~g~~~~ 213 (375)
T PRK11706 146 ------NLFVVEDAAQGVMST--YKGRALG--TIGHIGCFSFHETKNYTAGEG-GALLINDPALI-ERAEIIREKGTNRS 213 (375)
T ss_pred ------CCEEEEECccccccc--cCCeeee--cCcCEEEEeCCCCccccccCC-eEEEECCHHHH-HHHHHHHHcCCCcc
Confidence 999999999986531 1111000 111233444444498866555 33444443322 211111100
Q ss_pred --CCCCCCC--ceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCC---eEEeeCCC----CceE
Q 014163 307 --LGSDQPT--FTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGR---FEILSKDV----GVPL 375 (429)
Q Consensus 307 --~~~~~~~--~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~---~~~~~~~~----~~~~ 375 (429)
....... +...|+..-.. .+.+++-....+.+++..++.+++++++.+.|+.+++ +.+...++ ...+
T Consensus 214 ~~~~~~~~~~~~~~~g~~~~~~--~~~aa~~~~ql~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 291 (375)
T PRK11706 214 QFFRGQVDKYTWVDIGSSYLPS--ELQAAYLWAQLEAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHM 291 (375)
T ss_pred hhhccCCCcceeeecccccCcC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEE
Confidence 0000000 00012221111 1122221112244778888888999999999988762 33221111 1224
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHhccCceeccc
Q 014163 376 VAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK 409 (429)
Q Consensus 376 v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~ 409 (429)
+.+.+.+ ..+.+++.+.|. ++||..+.+
T Consensus 292 ~~~~~~~--~~~r~~l~~~L~----~~gI~~~~~ 319 (375)
T PRK11706 292 FYIKLRD--LEDRSALINFLK----EAGIMAVFH 319 (375)
T ss_pred EEEEECC--cCCHHHHHHHHH----HCCCCcccc
Confidence 4455432 346778888887 999987654
No 228
>PRK10534 L-threonine aldolase; Provisional
Probab=99.80 E-value=5.8e-18 Score=162.99 Aligned_cols=289 Identities=14% Similarity=0.106 Sum_probs=174.8
Q ss_pred ChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHh
Q 014163 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (429)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~ 147 (429)
++|.+.+++..... +...|...+...+||+. +++++|.+. ..++.||++++.+++.+...
T Consensus 12 p~~~~~~a~~~~~~-~~~~Y~~~~~~~~L~~~----la~~~g~~~-------~~v~~~g~~a~~~~l~~~~~-------- 71 (333)
T PRK10534 12 PSRAMLEAMMAAPV-GDDVYGDDPTVNALQDY----AAELSGKEA-------ALFLPTGTQANLVALLSHCE-------- 71 (333)
T ss_pred CCHHHHHHHHhccC-CCcccCCCHHHHHHHHH----HHHHhCCCe-------EEEeCchHHHHHHHHHHhcC--------
Confidence 66777787765443 33335556677777765 788889875 67999999999888887643
Q ss_pred cCCCCCCcEEEEcCCCchH-HHHH-HHhcC-ceeEEEeccCCccccCHHHHHHHhhh------CCeEEEEeeCCCccccc
Q 014163 148 QGKPYDKPNIVTGANVQVC-WEKF-ARYFE-VELKEVKLEEGYYVMNPVKAVELVDE------NTICVAAILGSTLTGEF 218 (429)
Q Consensus 148 ~g~~~~~~~vi~~~~~h~s-~~~~-~~~~G-~~v~~v~~~~~~~~~d~~~l~~~i~~------~~~~v~~~~~~~~tG~~ 218 (429)
.+++|+++.+.|.. +... +...| +.++.++++++ +.+|+++|++++++ ++++|++++++ +|.+
T Consensus 72 -----~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v 143 (333)
T PRK10534 72 -----RGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAAD-GTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKV 143 (333)
T ss_pred -----CCCeeEEechhhhhHhcCCchHHhcCceEEeecCCCC-CCCCHHHHHHhhcccCcCcccceEEEEecCC--CCee
Confidence 12578888888854 3321 34444 67777777654 89999999999976 57888888654 5998
Q ss_pred cChH---HHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCC
Q 014163 219 EDVK---LLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDD 295 (429)
Q Consensus 219 ~~l~---~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~ 295 (429)
.+.+ +|+++|+++ ++++++|+||..+.......... .+ ....|.++++.+|.+..+ +|+.++.+++.
T Consensus 144 ~~~~~l~~i~~~~~~~------~~~lvvDEA~~~~~~~~~~~~~~-~~-~~~~~~~~~s~SK~~~~~--~G~~~~~~~~~ 213 (333)
T PRK10534 144 LPREYLKQAWEFTRER------NLALHVDGARIFNAVVAYGCELK-EI-TQYCDSFTICLSKGLGTP--VGSLLVGNRDY 213 (333)
T ss_pred cCHHHHHHHHHHHHHc------CCeEEeeHHHHHHHHHHcCCCHH-HH-HhcCCEEEEEeEcCCCCc--ccceEEcCHHH
Confidence 6665 556788999 99999999986321100011110 11 112455556788965544 56433344433
Q ss_pred cccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceE
Q 014163 296 LPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPL 375 (429)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~ 375 (429)
. ..+......... .-+ ...+.+.+++..+.. ..+.+++..+.++++.+.|++++ +++. ++ ..++
T Consensus 214 i-~~~~~~~~~~~~---------~~~-~~~~~~a~~~~~l~~--~~~~~~~~~~~r~~l~~~L~~~g-~~~~-~~-~~nf 277 (333)
T PRK10534 214 I-KRARRWRKMTGG---------GMR-QAGILAAAGLYALKH--NVARLQEDHDNAAWLAEQLREAG-ADVM-RQ-DTNM 277 (333)
T ss_pred H-HHHHHHHHHhCC---------chh-hHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHhCC-CccC-CC-CceE
Confidence 2 222211111100 000 112223334433321 23445556667889999999985 7765 33 5777
Q ss_pred EEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEec
Q 014163 376 VAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 376 v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
+.+++.+ .+..++.+.|. ++|+.++++ + .+|++.+
T Consensus 278 v~~~~~~---~~~~~~~~~l~----~~gi~v~~~-~-------~~rl~~~ 312 (333)
T PRK10534 278 LFVRVGE---EQAAALGEYMR----ERNVLINAS-P-------IVRLVTH 312 (333)
T ss_pred EEEECCc---hhHHHHHHHHH----HcCeeecCC-c-------eEEEEEE
Confidence 7777642 23455666666 999998642 1 3688764
No 229
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.80 E-value=4.7e-17 Score=160.76 Aligned_cols=306 Identities=13% Similarity=0.029 Sum_probs=189.1
Q ss_pred ChHHHHHHHHHHcCcCCCCCccCh---hhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHH
Q 014163 68 MEPECDKLVMASINKNYVDMDEYP---VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (429)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~ 144 (429)
.+|++.+++.+.++........++ +.....+++.+.+++++|.+. ..+.++|++|+..++.++...
T Consensus 60 ~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~-------~~~~~SG~~An~~ai~~l~~~---- 128 (406)
T PRK13393 60 QHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLHGKEA-------ALLFTSGYVSNWAALSTLGSR---- 128 (406)
T ss_pred CCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHhCCCc-------EEEeCCcHHHHHHHHHHhhcC----
Confidence 468888888887765332211111 223345566677999998753 666677788998888865431
Q ss_pred HHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhh----hCCeEEEEeeCCCccccccC
Q 014163 145 RKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD----ENTICVAAILGSTLTGEFED 220 (429)
Q Consensus 145 ~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~----~~~~~v~~~~~~~~tG~~~~ 220 (429)
..++.|+.....|.++...++..|.+++.++. .|++++++.++ +++++|++.++++++|.+.|
T Consensus 129 -------~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~------~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~ 195 (406)
T PRK13393 129 -------LPGCVILSDELNHASMIEGIRHSRAEKRIFRH------NDPADLERKLSDLDPHRPKLVAFESVYSMDGDIAP 195 (406)
T ss_pred -------CCCCEEEEccchhHHHHHHHHHcCCeEEEeCC------CCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchhC
Confidence 01246777788999988888888888776653 35667777665 25688889999999999999
Q ss_pred hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccC-CCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccc
Q 014163 221 VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDE 299 (429)
Q Consensus 221 l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~ 299 (429)
+++|.++|+++ ++++++|++|+.+...-.........+ ....|.+..+.-|.++. .| |+++.+ ++.. +.
T Consensus 196 l~~i~~l~~~~------~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~-~G-G~~~~~-~~~~-~~ 265 (406)
T PRK13393 196 IAEICDVAEKH------GAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGV-MG-GYITGS-AALC-DF 265 (406)
T ss_pred HHHHHHHHHHc------CCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcc-cC-ceeeCC-HHHH-HH
Confidence 99999999999 999999999974331101000000111 12367777777887654 23 665532 2221 21
Q ss_pred cccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEE
Q 014163 300 LVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFS 379 (429)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~ 379 (429)
+.... ..+.+.++.+.....+..++++.+...+ ...++..++++++.+.|++.+ ++++. + ..+++.+.
T Consensus 266 l~~~~-------~~~~~t~~~~p~~~aa~~aaL~~~~~~~--~~~~~~~~~~~~l~~~L~~~g-~~~~~-~-~~~i~~v~ 333 (406)
T PRK13393 266 IRSFA-------SGFIFTTSLPPAVAAGALASVRHLKASS--AERERHQDRVARLRARLDKAG-IPHLP-N-PSHIVPVM 333 (406)
T ss_pred HHHhC-------cCceecCccCHHHHHHHHHHHHHHhhCH--HHHHHHHHHHHHHHHHHHHcC-CCcCC-C-CCCeEEEE
Confidence 11110 0111112333334455666776654333 223566788999999998874 66552 2 45666665
Q ss_pred ecCCCCCCHHHHHHHHHHHHhc-cCceeccc-CCCCCCCceEEEEEec
Q 014163 380 LKDSSAHTVFEISEGLRKKLNR-FQVVYPQK-LPMSYPWSTKLRVISH 425 (429)
Q Consensus 380 ~~~~~~~~~~~~~~~L~~~l~~-~G~~~~~~-~~~~~~~~~~lRi~~~ 425 (429)
+.+ ..+..++.+.|. + +|+.++.. .|....+...+|++++
T Consensus 334 ~~~--~~~~~~l~~~L~----~~~Gi~v~~~~~p~~p~g~~~iRis~~ 375 (406)
T PRK13393 334 VGD--PVLCKQISDELL----DRYGIYVQPINYPTVPRGTERLRITPS 375 (406)
T ss_pred eCC--HHHHHHHHHHHH----HhCCEEEEeECCCCCCCCCceEEEEEC
Confidence 422 123345555555 6 59998866 4443446577999986
No 230
>PRK08354 putative aminotransferase; Provisional
Probab=99.79 E-value=3.6e-17 Score=155.76 Aligned_cols=180 Identities=21% Similarity=0.217 Sum_probs=124.7
Q ss_pred ccccccCCChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHH
Q 014163 60 LASFVTTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKR 139 (429)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~ 139 (429)
|.....+.+++.+.+++.+++... . .+|... .+++++++.+|.+ +++|+|+++++.+.+..+.
T Consensus 13 l~~~~np~~p~~~~~a~~~~~~~~-~---~yp~~~----~l~~~ia~~~~~~--------I~vt~G~~~al~~~~~~~~- 75 (311)
T PRK08354 13 FSASVNPYPPEWLDEMFERAKEIS-G---RYTYYE----WLEEEFSKLFGEP--------IVITAGITEALYLIGILAL- 75 (311)
T ss_pred ecCCCCCCCCHHHHHHHHHHHHHh-h---cCCChH----HHHHHHHHHHCCC--------EEECCCHHHHHHHHHHhhC-
Confidence 333333333456777776665432 1 233333 3456788888742 8899999999886654332
Q ss_pred HHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCcccccc
Q 014163 140 KWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFE 219 (429)
Q Consensus 140 ~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~ 219 (429)
.++.|+++.++|+.+..+++..|++++.+ .+|++.|++.++ +++++++++|+||||.+.
T Consensus 76 -------------~gd~vlv~~P~y~~~~~~~~~~g~~~~~~-------~~d~~~l~~~~~-~~~~vi~~~P~NPTG~~~ 134 (311)
T PRK08354 76 -------------RDRKVIIPRHTYGEYERVARFFAARIIKG-------PNDPEKLEELVE-RNSVVFFCNPNNPDGKFY 134 (311)
T ss_pred -------------CCCeEEEeCCCcHHHHHHHHHcCCEEeec-------CCCHHHHHHhhc-CCCEEEEecCCCCCCCcc
Confidence 13689999999999999999999988654 367888988877 567899999999999985
Q ss_pred C---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccC-CCCCCeEEEEE
Q 014163 220 D---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYG-LVYAGVGWVVW 290 (429)
Q Consensus 220 ~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~-~~p~g~g~l~~ 290 (429)
+ +++|.++|+++ ++|+++|++|+.+.. ... . ...+++-.+ .|.-|.+ +++.++|+++.
T Consensus 135 ~~~~l~~l~~~a~~~------~~~li~De~y~~f~~---~~~-~--~~~~~vi~~-~S~SK~~~l~GlRiG~~v~ 196 (311)
T PRK08354 135 NFKELKPLLDAVEDR------NALLILDEAFIDFVK---KPE-S--PEGENIIKL-RTFTKSYGLPGIRVGYVKG 196 (311)
T ss_pred CHHHHHHHHHHhhhc------CcEEEEeCcchhccc---ccc-c--cCCCcEEEE-eccHhhcCCccceeeeeee
Confidence 5 66777788899 999999999987532 111 1 112233333 3445654 58899999886
No 231
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.79 E-value=4.5e-17 Score=159.54 Aligned_cols=246 Identities=20% Similarity=0.131 Sum_probs=170.5
Q ss_pred ChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHH
Q 014163 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (429)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~ 169 (429)
.|....||+. ++++.|... .+.+++|+.|+.+++.++.. .+++||++.+.|.+...
T Consensus 60 nPtv~~lE~~----la~leg~~~-------av~~~SG~aAi~~al~all~-------------~GD~VI~~~~~Y~~T~~ 115 (432)
T PRK06702 60 NPTLAAFEQK----LAELEGGVG-------AVATASGQAAIMLAVLNICS-------------SGDHLLCSSTVYGGTFN 115 (432)
T ss_pred CcHHHHHHHH----HHHHhCCCc-------EEEECCHHHHHHHHHHHhcC-------------CCCEEEECCCchHHHHH
Confidence 4666777765 888888864 78899999999999987743 23699999998875444
Q ss_pred H----HHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeec
Q 014163 170 F----ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (429)
Q Consensus 170 ~----~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~ 245 (429)
. +..+|+++++++ ..+|+++++++|+++|++|++.+++||++.+.|+++|+++|+++ |+++++|+
T Consensus 116 ~~~~~l~~~Gi~v~~vd-----~~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~Di~~I~~iA~~~------gi~livD~ 184 (432)
T PRK06702 116 LFGVSLRKLGIDVTFFN-----PNLTADEIVALANDKTKLVYAESLGNPAMNVLNFKEFSDAAKEL------EVPFIVDN 184 (432)
T ss_pred HHHHHHHHCCCEEEEEC-----CCCCHHHHHHhCCcCCeEEEEEcCCCccccccCHHHHHHHHHHc------CCEEEEEC
Confidence 4 677899988884 34789999999999999999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCe--EEEEEeCC-CCcc----cccccccC-----CCCCC--C
Q 014163 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGV--GWVVWRTK-DDLP----DELVFHIN-----YLGSD--Q 311 (429)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~--g~l~~~~~-~~~~----~~~~~~~~-----~~~~~--~ 311 (429)
+++. |++.... ..++|.++.|..||+.++.++ |+++.... .+.. ........ +.... .
T Consensus 185 T~~t---P~~~~pl-----~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~ 256 (432)
T PRK06702 185 TLAT---PYLCQAF-----EHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAA 256 (432)
T ss_pred CCCc---hhhCChh-----hcCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchh
Confidence 9863 2222111 136999999999998887654 33332211 1100 00000000 00000 0
Q ss_pred C-----C---ceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC------------
Q 014163 312 P-----T---FTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV------------ 371 (429)
Q Consensus 312 ~-----~---~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~------------ 371 (429)
. . ....|+. ......|.+++.+ +.+..++++..+++..+.+.|++.|.++.+..|.
T Consensus 257 ~~~~~~~~~~~~~~g~~--~sp~~a~l~~rgL--~Tl~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~~~ 332 (432)
T PRK06702 257 AYIVKARVQLLRDYGNC--MSPFNAYISNIGL--ETLHLRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQK 332 (432)
T ss_pred hHHHHHHHHHHHHccCC--CCHHHHHHHHhcc--CcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHHHH
Confidence 0 0 0000221 2344555555444 4578899999999999999999999876444331
Q ss_pred -----CceEEEEEecC
Q 014163 372 -----GVPLVAFSLKD 382 (429)
Q Consensus 372 -----~~~~v~f~~~~ 382 (429)
..++++|.+++
T Consensus 333 ~~~~g~gg~~sf~l~~ 348 (432)
T PRK06702 333 YLKKGASGVLTFGIKG 348 (432)
T ss_pred hCcCCCceEEEEEecC
Confidence 13689999863
No 232
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.79 E-value=3.6e-17 Score=158.78 Aligned_cols=229 Identities=16% Similarity=0.012 Sum_probs=157.2
Q ss_pred ChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHH
Q 014163 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (429)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~ 169 (429)
.|...++|+. ++++.+ + ..+++++|++|+..++.++.. .+++|+++.+.|+.+..
T Consensus 50 ~p~~~~Le~~----lA~l~~-~-------~~v~~~sG~~Ai~~~l~all~-------------~Gd~Vl~~~~~y~~~~~ 104 (366)
T PRK07582 50 NPTWRALEAA----LGELEG-A-------EALVFPSGMAAITAVLRALLR-------------PGDTVVVPADGYYQVRA 104 (366)
T ss_pred CccHHHHHHH----HHHHcC-C-------CEEEECCHHHHHHHHHHHhcC-------------CCCEEEEeCCCcHhHHH
Confidence 4566666655 677662 2 167778888899888777643 23689999988877655
Q ss_pred HH----HhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeec
Q 014163 170 FA----RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (429)
Q Consensus 170 ~~----~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~ 245 (429)
.+ ...|++++.++.+++ +. .+.+++++|++++++||+|.+.|+++|+++|+++ |++++||+
T Consensus 105 ~~~~~l~~~G~~v~~v~~~~~-~~--------~~~~~t~lV~le~p~NPtg~v~di~~I~~~a~~~------g~~lvVD~ 169 (366)
T PRK07582 105 LAREYLAPLGVTVREAPTAGM-AE--------AALAGADLVLAETPSNPGLDVCDLAALAAAAHAA------GALLVVDN 169 (366)
T ss_pred HHHHHHhcCeEEEEEECCCCh-HH--------HhccCceEEEEECCCCCCCCccCHHHHHHHHHHc------CCEEEEEC
Confidence 43 457999999987543 21 2336789999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCC--eEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchh
Q 014163 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSS 323 (429)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~ 323 (429)
+|+... .. ...+ .++|+++.|.|||+.++.| .|+++.++++.. ..+.....+.+. + .
T Consensus 170 t~~~~~---~~--~p~~---~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~-~~l~~~~~~~g~---------~---~ 228 (366)
T PRK07582 170 TTATPL---GQ--RPLE---LGADLVVASDTKALTGHSDLLLGYVAGRDPELM-AAVERWRLLAGA---------I---P 228 (366)
T ss_pred CCCCcc---cc--Cchh---cCCcEEEecccccccCCCCeeEEEEEcCcHHHH-HHHHHHHHHhCC---------C---C
Confidence 986321 11 1112 2589999999999988776 488776544322 222111111111 1 1
Q ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCC-----C-----------CceEEEEEec
Q 014163 324 QIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKD-----V-----------GVPLVAFSLK 381 (429)
Q Consensus 324 ~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-----~-----------~~~~v~f~~~ 381 (429)
.....|.+++.+. .+..++++..+++..+.+.|++.|.++-+.-| + ..++++|.++
T Consensus 229 ~~~~a~l~~r~l~--tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~ 300 (366)
T PRK07582 229 GPFEAWLAHRSLG--TLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELA 300 (366)
T ss_pred CHHHHHHHHhccc--cHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeC
Confidence 2334555554443 46788899999999999999999987654421 1 3579999985
No 233
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.79 E-value=6.4e-18 Score=149.78 Aligned_cols=301 Identities=16% Similarity=0.149 Sum_probs=201.7
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
-|+.+++++|..+.-.. .-|...|.+..||++ .|+++|-+. +.|+++||++|++++++.+.+
T Consensus 33 ~PTdeMr~am~eA~vgD-dVyGeD~tt~rLE~~----vA~l~GKEA-------gLFv~SGTmgNllaIm~Hc~~------ 94 (384)
T KOG1368|consen 33 VPTDEMRRAMAEASVGD-DVYGEDPTTNRLEQR----VAELFGKEA-------GLFVPSGTMGNLLAIMVHCHQ------ 94 (384)
T ss_pred CChHHHHHHHhhcccCc-ccccCCccHHHHHHH----HHHHhCccc-------eeeecccccccHHHHHHHhcC------
Confidence 45667777777654332 125677888999987 788899875 899999999999999998874
Q ss_pred hcCCCCCCcEEEEcCCCchH-HHH--HHHhcCceeEEEeccCCccccCHHHHHHHhhh--------CCeEEEEeeCCCcc
Q 014163 147 EQGKPYDKPNIVTGANVQVC-WEK--FARYFEVELKEVKLEEGYYVMNPVKAVELVDE--------NTICVAAILGSTLT 215 (429)
Q Consensus 147 ~~g~~~~~~~vi~~~~~h~s-~~~--~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~--------~~~~v~~~~~~~~t 215 (429)
.+-+|++.+..|.- |+. ++.+.|+.++.|...++ +.||++++|+++.. .|++|++-.-.+.+
T Consensus 95 ------rg~eii~gd~~HI~~~E~gg~s~l~gv~~~tv~~e~d-gtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~ 167 (384)
T KOG1368|consen 95 ------RGSEIIVGDRAHIHRYEQGGISQLAGVHVRTVKNEND-GTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNC 167 (384)
T ss_pred ------CCceEEeccchheeehhccChhhhccceeEeeeeCCC-CeeeHHHHHHhhcCCCCCccCCCceEEEeecccccc
Confidence 12489999999963 443 35667888888887665 78999999999983 26888887777777
Q ss_pred c-cccCh---HHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEe
Q 014163 216 G-EFEDV---KLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (429)
Q Consensus 216 G-~~~~l---~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~ 291 (429)
| .+-|+ .+|.++|+++ |+.+|.|||.-.-.. .....+..--...+||+++...|.+++|.|+- ++.
T Consensus 168 Gg~vlPle~~~~v~~lak~~------glkLH~DGARi~NAa--vasgV~vk~i~~~fDSVsiCLSKglgAPVGSV--iVG 237 (384)
T KOG1368|consen 168 GGKVLPLEELDRVKALAKRH------GLKLHMDGARIFNAA--VASGVPVKKICSAFDSVSICLSKGLGAPVGSV--IVG 237 (384)
T ss_pred CceEeeHHHHHHHHHHHhcc------CCeeecchhhhhhHH--HHcCCCHHHHHHhhhhhhhhhhccCCCCcccE--EEc
Confidence 7 66555 5677889999 999999998743221 00000111011358999999999999998863 334
Q ss_pred CCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC
Q 014163 292 TKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV 371 (429)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 371 (429)
+++.+.+.-.+... +++ |.|- ..++ ..+++-.+... +. .+++..++++.+.+.+...+++++-.+..
T Consensus 238 ~k~FI~kA~~~RKa-lGG--------GmRQ-sGvL-aaaaLval~~~-~~-~L~~dHk~A~~lAe~~~~~~~i~v~v~a~ 304 (384)
T KOG1368|consen 238 SKDFIDKARHFRKA-LGG--------GMRQ-SGVL-AAAALVALDEN-VP-LLRADHKRAKELAEYINTPEEIRVEVPAV 304 (384)
T ss_pred cHHHHHHHHHHHHH-hcC--------chhH-HHHH-HHHHHHHhhcc-hH-HHHHHHHHHHHHHHHhccccceeeecchh
Confidence 43333222112222 222 2332 2232 23344344332 23 56677788888888888888788765533
Q ss_pred CceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEecc
Q 014163 372 GVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHL 426 (429)
Q Consensus 372 ~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~ 426 (429)
+.+++.+.+.- ..++++++.+.+. +.|+.+... ...-+|++++.
T Consensus 305 etNiv~~~l~q-~~~~~~~l~~~~~----k~gi~lm~~------~s~r~Rivlh~ 348 (384)
T KOG1368|consen 305 ETNIVNMVLCQ-ARLTAEELCKFLE----KNGILLMGG------ASRRIRIVLHH 348 (384)
T ss_pred hcceeeeeccc-ccCCHHHHHHHHH----HCCeEEeec------cccceEEEEEE
Confidence 67777776643 3688888888888 999887542 11127887753
No 234
>PLN02397 aspartate transaminase
Probab=99.78 E-value=7.5e-17 Score=159.79 Aligned_cols=305 Identities=14% Similarity=0.087 Sum_probs=180.9
Q ss_pred ccccccc-cCCC-hH----HHHHHHHHHcCcC-CCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHH-
Q 014163 58 LNLASFV-TTWM-EP----ECDKLVMASINKN-YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEA- 129 (429)
Q Consensus 58 ~~~~~~~-~~~~-~~----~~~~~~~~~~~~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a- 129 (429)
++++.+. +++. .| .+.++....++.+ ...|....|..++++.+.+|+.+..+.+.+ ++......+.+++.+
T Consensus 51 l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~-~~~i~~~~i~~g~Ga~ 129 (423)
T PLN02397 51 LNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIK-ENRVATVQCLSGTGSL 129 (423)
T ss_pred EecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhh-cCeeEeeecccchHHH
Confidence 5666663 4442 23 3444433333333 235777789999999988888654322211 111111223444444
Q ss_pred -HHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEec-cCCccccCHHHHHHHhh---hCCe
Q 014163 130 -IMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL-EEGYYVMNPVKAVELVD---ENTI 204 (429)
Q Consensus 130 -~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~-~~~~~~~d~~~l~~~i~---~~~~ 204 (429)
+..++..... .+++|++++++|+.+...++..|++++.+|+ +++++.+|++.+++.+. ++++
T Consensus 130 ~l~~~~~~~~~-------------pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~ 196 (423)
T PLN02397 130 RLGAEFLARFY-------------PGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSF 196 (423)
T ss_pred HHHHHHHHHhC-------------CCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHHHHHHHHhCCCCCE
Confidence 3333333322 2368999999999999999999999999998 33347899999988876 4578
Q ss_pred EEEEeeCCCccccc---cChHHHHHHHHHhhhccCCCccEEeecccccccccccCC---CC-c-ccc--CCCCeeEEEEc
Q 014163 205 CVAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYP---DL-E-WDF--RLPLVKSINVS 274 (429)
Q Consensus 205 ~v~~~~~~~~tG~~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~---~~-~-~~~--~~~~~d~~~~s 274 (429)
++++++|+||||.+ +.+++|+++|++| ++++++|++|..+.. .+ .. . ..+ ....+-++. |
T Consensus 197 ~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~------~~~vI~De~Y~~l~~---~~~~~~~~~~~~~~~~~~~vI~~~-S 266 (423)
T PLN02397 197 VLLHACAHNPTGVDPTPEQWEQISDLIKSK------NHLPFFDSAYQGFAS---GDLDADAQSVRMFVEDGHEILVAQ-S 266 (423)
T ss_pred EEEeCCCCCCCCCCCCHHHHHHHHHHHHhC------CcEEEEecccCCccC---CchhhhhHHHHHHHhcCCcEEEEE-E
Confidence 88889999999998 4577888899999 999999999987531 11 00 0 011 112233333 4
Q ss_pred Ccc-cCCCCCCeEEEEE--eCCCCcccccccc-cCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHH--------HHHH
Q 014163 275 GHK-YGLVYAGVGWVVW--RTKDDLPDELVFH-INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFE--------GYKN 342 (429)
Q Consensus 275 ~hK-~~~~p~g~g~l~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~--------g~~~ 342 (429)
.-| +.++++++||+++ .+++.. ..+... ....... . .. .....+.++...+... .+++
T Consensus 267 fSK~~~~~G~RvG~~v~~~~~~~~~-~~~~~~~~~~~~~~---~---~~---~~~~~q~~~~~~L~~~~~~~~~~~~~~~ 336 (423)
T PLN02397 267 YAKNMGLYGERVGALSVVCKSADVA-VRVKSQLKLIARPM---Y---SN---PPIHGASIVATILGDPELFSEWTKELKG 336 (423)
T ss_pred CcccCCCccccceEEEEEeCCHHHH-HHHHHHHHHHHhcc---c---CC---CcHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 455 5558999999863 222211 110000 0000000 0 01 1223344444444321 1466
Q ss_pred HHHHHHHHHHHHHHHHHhCC---CeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceec
Q 014163 343 IMENCMGNARALREGLEKTG---RFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYP 407 (429)
Q Consensus 343 ~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~ 407 (429)
..++..++++.+.+.|++++ ++.++. + +.++++|-- ++ .++++.|.+ +.|+.+.
T Consensus 337 ~~~~~~~rr~~l~~~L~~~~~~~~~~~~~-p-~gg~fl~~~-----l~-~~~~~~Ll~---~~~V~v~ 393 (423)
T PLN02397 337 MADRIISMRQKLYDALEARGSPGDWSHIT-K-QIGMFSFTG-----LN-KEQVDRMTK---EYHIYMT 393 (423)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCccc-C-CceEEEecC-----CC-HHHHHHHHH---hCCEEEC
Confidence 67788899999999999884 144433 3 566666642 22 357777763 6788864
No 235
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.78 E-value=8.5e-17 Score=156.94 Aligned_cols=269 Identities=12% Similarity=-0.016 Sum_probs=164.3
Q ss_pred hhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHH
Q 014163 92 VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA 171 (429)
Q Consensus 92 ~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~ 171 (429)
+..++-+++++.+++++|.+. ..+.++|+.|+...+..+.. +++.|++....|.+....+
T Consensus 53 g~~~~~~~~e~~la~~~~~~~-------~l~~~sG~~a~~~~~~~~~~-------------~~d~ii~d~~~H~sv~~~~ 112 (370)
T PRK05937 53 GPSSLLDDLEHKIAHFHGAPE-------AFIVPSGYMANLGLCAHLSS-------------VTDYVLWDEQVHISVVYSL 112 (370)
T ss_pred CChHHHHHHHHHHHHHhCCCe-------EEEECChHHHHHHHHHHhCC-------------CCCEEEEEhhhhHHHHHHH
Confidence 456666788889999999964 34455555676532222111 1257778899999988887
Q ss_pred HhcCceeEEEeccCCccccCHHHHHHHhhh------CCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeec
Q 014163 172 RYFEVELKEVKLEEGYYVMNPVKAVELVDE------NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (429)
Q Consensus 172 ~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~------~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~ 245 (429)
+...... ++. ...|+++|++++++ ++.+|+++++++++|.+.|+++|+++|+++ ++++|||+
T Consensus 113 ~~~~~~~--~~~----~~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~------~~~livDe 180 (370)
T PRK05937 113 SVISGWH--QSF----RHNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKY------HAHLIVDE 180 (370)
T ss_pred HHcCCce--EEe----cCCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHc------CCEEEEEC
Confidence 7654322 222 23689999999873 356777899999999999999999999999 99999999
Q ss_pred ccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccc-cccCCCCCCCCCceeccCCchhH
Q 014163 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELV-FHINYLGSDQPTFTLNFSKGSSQ 324 (429)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~tr~~~~ 324 (429)
||+.+..+.........++....+.+..+.+|.+ +|.|.|+++.++ .. ..+. ....+. +.++.+...
T Consensus 181 a~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~-g~~G~~vl~~~~--~~-~~~~~~~~~~~--------~s~~~~~~~ 248 (370)
T PRK05937 181 AHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKAL-GSMGAALLSSSE--VK-QDLMLNSPPLR--------YSTGLPPHL 248 (370)
T ss_pred CccccccCCCCCchHHhhCCCCCcEEEEechhhh-hcCceEEEcCHH--HH-HHHHHhCCCCe--------ecCCCCHHH
Confidence 9985543211100001112222334455666966 567877665322 11 1111 011121 112223345
Q ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCc
Q 014163 325 IIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQV 404 (429)
Q Consensus 325 ~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~ 404 (429)
++++.++++.+...+ +...++..++++++.+.|...+ + ...+.+.+++ .+..++.+.|. ++|+
T Consensus 249 ~~a~~aal~~l~~~~-~~~~~~l~~l~~~l~~~l~~~~------~---~~~~~i~~~~---~~~~~~~~~L~----~~gi 311 (370)
T PRK05937 249 LISIQVAYDFLSQEG-ELARKQLFRLKEYFAQKFSSAA------P---GCVQPIFLPG---ISEQELYSKLV----ETGI 311 (370)
T ss_pred HHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHhcCCCC------C---CCEEEEEeCC---hhHHHHHHHHH----HCCe
Confidence 666667777765554 4566788888899988875432 0 1112244432 23445566665 8999
Q ss_pred eeccc-CCCCCCCceEEEEEec
Q 014163 405 VYPQK-LPMSYPWSTKLRVISH 425 (429)
Q Consensus 405 ~~~~~-~~~~~~~~~~lRi~~~ 425 (429)
.+... .| ....+|+|++
T Consensus 312 ~v~~~~~~----~~~~iRis~~ 329 (370)
T PRK05937 312 RVGVVCFP----TGPFLRVNLH 329 (370)
T ss_pred eEEeeCCC----CCCEEEEEcC
Confidence 88643 22 2346999996
No 236
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.78 E-value=2.6e-17 Score=158.34 Aligned_cols=308 Identities=12% Similarity=0.038 Sum_probs=200.9
Q ss_pred hHH-HHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHh
Q 014163 69 EPE-CDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (429)
Q Consensus 69 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~ 147 (429)
.|. ..+++.+.+-... -.++...++.+++.+.|.++++.+.+. ....++.+||.++-.++..+..+
T Consensus 15 ~~~~~~~~~~~~~~~~~---HRs~~F~~i~~e~~~~L~~l~~~~~~~---~v~~l~GsGT~a~Eaa~~nl~~~------- 81 (374)
T TIGR01365 15 RPGWSIEELKNAPLGRS---HRSKLGKEKLAEAIKKTREMLGVPADY---LIGIVPASDTGAVEMALWSMLGC------- 81 (374)
T ss_pred CchhhHHHHhhhhcccC---cCCHHHHHHHHHHHHHHHHHhCCCCCc---EEEEECCchHHHHHHHHHHcCCC-------
Confidence 354 4455544332222 357788899999999999999986421 23456788999998888876531
Q ss_pred cCCCCCCcEEEEcCCCch-HHH-HHHHhcCce-eEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHH
Q 014163 148 QGKPYDKPNIVTGANVQV-CWE-KFARYFEVE-LKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLL 224 (429)
Q Consensus 148 ~g~~~~~~~vi~~~~~h~-s~~-~~~~~~G~~-v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I 224 (429)
.+..+++.. .+. .|. .+++.+|++ +..+..+++ ..+|+++++. + +.|.++|..|.||...|+++|
T Consensus 82 -----~g~~vLv~g-~FG~r~~~eia~~~g~~~v~~l~~~~g-~~~~~~~ve~--~---~~v~~vhnETSTGv~npv~~i 149 (374)
T TIGR01365 82 -----RGVDVLAWE-SFGKGWVTDVTKQLKLPDVRVLEAEYG-KLPDLKKVDF--K---NDVVFTWNGTTSGVRVPNGDF 149 (374)
T ss_pred -----CCCeEEEEC-HHHHHHHHHHHHhcCCCCcEEEcCCCC-CCCCHHHcCC--C---CCEEEecCCCchheecccccc
Confidence 123566554 222 355 888999994 888887765 5789999873 1 236799999999999999766
Q ss_pred HHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCccccc-cc-
Q 014163 225 HDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDEL-VF- 302 (429)
Q Consensus 225 ~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~-~~- 302 (429)
+..+ + ++.++||++.+.+..++ ++ .++|++..+++|.+++|+|.++++++++.+..... ..
T Consensus 150 ~~~~--~------~~lliVDavSs~g~~~l-------~~--d~iDv~~tgsQK~L~~ppGls~v~vs~~Al~~~~~~~~y 212 (374)
T TIGR01365 150 IPAD--R------EGLTICDATSAAFAQDL-------DY--HKLDVVTFSWQKVLGGEGAHGMLILSPRAVARLESYTPA 212 (374)
T ss_pred cccc--C------CCcEEEEccchhcCCCC-------Ch--hHCcEEEEechhccCCCCceEEEEECHHHHHHHhhcCCC
Confidence 5322 6 78999999987654422 22 25999999999999999999999987654321000 00
Q ss_pred --ccCCCCCCC--------CCceeccCCchhHHHHHHHHHHHcCHH-HHHHHHHHHHHHHHHHHHHHHhCCCeEEeeC-C
Q 014163 303 --HINYLGSDQ--------PTFTLNFSKGSSQIIAQYYQFIRLGFE-GYKNIMENCMGNARALREGLEKTGRFEILSK-D 370 (429)
Q Consensus 303 --~~~~~~~~~--------~~~~~~~tr~~~~~~~~~~al~~l~~~-g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~ 370 (429)
.+.|+.... .......|++...+.++..+++.+..+ |++++.+++.++++.+++++++++.+.++.. +
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~ 292 (374)
T TIGR01365 213 WPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETP 292 (374)
T ss_pred CCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCCh
Confidence 001111000 011122455444444444555555564 8999999999999999999999985676653 1
Q ss_pred C--CceEEEEEecCCCCC-----C-----HHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEec
Q 014163 371 V--GVPLVAFSLKDSSAH-----T-----VFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 371 ~--~~~~v~f~~~~~~~~-----~-----~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
. +..+++++++++ ++ + .+++.+.|. ++|+.+.... ....+ ..+||...
T Consensus 293 ~~rS~tvt~v~~~~~-~~~~~~~~~~~~~~~~~~~~l~----~~gi~i~~G~-~~~~~-~~fRIg~~ 352 (374)
T TIGR01365 293 EIRSNTSVCLKVVDP-AIDALDEDAQADFAKELISTLE----KEGVAYDIGS-YRDAP-SGLRIWCG 352 (374)
T ss_pred hhcCCCeEEEEeCCc-cccccccchhhHHHHHHHHHHH----HCCEEEeccc-cccCC-CceEEecC
Confidence 1 445677877432 22 2 456666666 8999876432 22333 56998754
No 237
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.78 E-value=2.8e-17 Score=143.88 Aligned_cols=271 Identities=16% Similarity=0.083 Sum_probs=192.5
Q ss_pred ChHHHHHHHHHHcCcCC-CCCc--------cChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHH
Q 014163 68 MEPECDKLVMASINKNY-VDMD--------EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFK 138 (429)
Q Consensus 68 ~~~~~~~~~~~~~~~~~-~~~~--------~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~ 138 (429)
.++++++++.+.-+... -++. .-|... ...+.+++++|++. .-+|.|+-+|-+.++.+++
T Consensus 29 Lt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~----~F~~dlaeFlg~D~-------~R~t~GARe~KfavMhal~ 97 (382)
T COG1103 29 LTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIK----DFLEDLAEFLGMDE-------VRVTAGAREAKFAVMHALC 97 (382)
T ss_pred CCHHHHHHHHHhcCCcchhhhhccCccccccCCcHH----HHHHHHHHHhCCce-------eeecccchhhHHHHHHHhc
Confidence 35667777776654321 1222 112223 33344999999986 7799999999998888887
Q ss_pred HHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEecc-CCccccCHHHHHHHhhh-------CCeEEEEee
Q 014163 139 RKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE-EGYYVMNPVKAVELVDE-------NTICVAAIL 210 (429)
Q Consensus 139 ~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~-~~~~~~d~~~l~~~i~~-------~~~~v~~~~ 210 (429)
. .++-|++...+||+..-+|+..|+++..||-. -.++.++++...+.|++ .+.+..+++
T Consensus 98 ~-------------~gd~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh 164 (382)
T COG1103 98 K-------------EGDWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTH 164 (382)
T ss_pred c-------------CCCEEEEcCcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEec
Confidence 5 23689999999999999999999999999953 22389999998888864 257788999
Q ss_pred CCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEE
Q 014163 211 GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVW 290 (429)
Q Consensus 211 ~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~ 290 (429)
+....|.+.|.++++++|+++ ++++++.+||..+-++... ...++|+++.|+||.+.+...+|++.+
T Consensus 165 ~Dg~YGNl~Dakkva~ic~e~------gvPlllN~AYt~Grmpvs~-------ke~g~DFiVgSGHKsmAAs~PiGvl~~ 231 (382)
T COG1103 165 VDGEYGNLADAKKVAKICREY------GVPLLLNCAYTVGRMPVSG-------KEIGADFIVGSGHKSMAASAPIGVLAM 231 (382)
T ss_pred cCCCcCCchhhHHHHHHHHHc------CCceEeecceeeccccccc-------cccCCCEEEecCccchhccCCeeEEee
Confidence 999999999999999999999 9999999999866554322 224799999999999888888999887
Q ss_pred eCCCCcccccccccC-CCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeC
Q 014163 291 RTKDDLPDELVFHIN-YLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSK 369 (429)
Q Consensus 291 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 369 (429)
+. ++....++..-. |....... +.||..+..++.+.+++-..-+ . -+.++...+.+++|.+.|++++++..++.
T Consensus 232 ~e-E~ae~V~r~Sg~~~~~KEvel--lGCT~rGapivTlmASfP~V~e-R-VkrWdeEv~kaR~fv~elEkigg~~qlG~ 306 (382)
T COG1103 232 SE-EWAEIVLRRSGRAFPKKEVEL--LGCTVRGAPIVTLMASFPHVVE-R-VKRWDEEVEKARWFVAELEKIGGVKQLGE 306 (382)
T ss_pred hh-HHHHHHHhhcccccccceeee--ecccccCchHHHHHhcCHHHHH-H-HHHHHHHHHHHHHHHHHHHHhhhHHHhCC
Confidence 64 333233322212 21111111 3367667777777776643221 1 23445556788999999999998988876
Q ss_pred CC-CceEEEEEe
Q 014163 370 DV-GVPLVAFSL 380 (429)
Q Consensus 370 ~~-~~~~v~f~~ 380 (429)
.+ .-.++-|..
T Consensus 307 rPk~HdLm~Fet 318 (382)
T COG1103 307 RPKNHDLMKFET 318 (382)
T ss_pred CCcccceeeecC
Confidence 44 334555654
No 238
>PLN02509 cystathionine beta-lyase
Probab=99.78 E-value=1.7e-17 Score=163.93 Aligned_cols=229 Identities=14% Similarity=0.089 Sum_probs=161.5
Q ss_pred HHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHH----HH
Q 014163 96 LQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK----FA 171 (429)
Q Consensus 96 le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~----~~ 171 (429)
..+++.++++++.|.+. .+.+++|+.|+..++ .+.. .+++|+++.+.|.++.. .+
T Consensus 134 t~~aLE~~lA~leg~e~-------ai~~~SG~aAi~~il-~ll~-------------~GD~VI~~~~~y~~t~~ll~~~l 192 (464)
T PLN02509 134 TRDALESLLAKLDKADR-------AFCFTSGMAALSAVT-HLIK-------------NGEEIVAGDDVYGGSDRLLSQVV 192 (464)
T ss_pred HHHHHHHHHHHHhCCCE-------EEEeCcHHHHHHHHH-HHhC-------------CCCEEEEcCCchhhHHHHHHHHH
Confidence 35567777999888653 667778887764433 3322 23689999999987653 34
Q ss_pred HhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeeccccccc
Q 014163 172 RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFI 251 (429)
Q Consensus 172 ~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~ 251 (429)
...|++++.++. .|+++++++++++|++|++++++|++|.+.|+++|+++|+++ |++++||++|+.+.
T Consensus 193 ~~~G~~v~~vd~------~d~e~l~~ai~~~TklV~lesPsNPtG~i~Dl~~I~~lAk~~------g~~lIVD~A~a~~~ 260 (464)
T PLN02509 193 PRSGVVVKRVNT------TNLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKIAEMAHAQ------GALVLVDNSIMSPV 260 (464)
T ss_pred HHCCeEEEEeCC------CCHHHHHHhCCcCCeEEEEECCCCCCCCHHHHHHHHHHHHHc------CCEEEEECCccccc
Confidence 567888887753 368999999999999999999999999999999999999999 99999999997543
Q ss_pred ccccCCCCccccCCCCeeEEEEcCcccCCCCCC--eEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHH
Q 014163 252 APFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQY 329 (429)
Q Consensus 252 ~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~ 329 (429)
. .. + .. .++|++++|.+||+.++.+ .|+++++++. +...+....... |+. ......|
T Consensus 261 ~---~~--p--l~-~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~-l~~~~~~~~~~~----------g~~--l~p~~A~ 319 (464)
T PLN02509 261 L---SR--P--LE-LGADIVMHSATKFIAGHSDVMAGVLAVKGEK-LAKEVYFLQNSE----------GSG--LAPFDCW 319 (464)
T ss_pred c---CC--h--hh-cCCcEEEecCcccccCCCccceeEEEeccHH-HHHHHHHHHHhc----------CCC--cCHHHHH
Confidence 2 11 1 11 3689999999999988776 5777665442 211111111111 111 1233344
Q ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeE-EeeCC----C-----------CceEEEEEe
Q 014163 330 YQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKD----V-----------GVPLVAFSL 380 (429)
Q Consensus 330 ~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~----~-----------~~~~v~f~~ 380 (429)
..++ +.+.+..++++..+++.++.+.|+++|.++ +..|. + ..++++|.+
T Consensus 320 l~lr--~L~tL~~R~~r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~ 384 (464)
T PLN02509 320 LCLR--GIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFIT 384 (464)
T ss_pred HHHh--hhhhHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEe
Confidence 4443 345578899999999999999999999875 44331 0 246899987
No 239
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.78 E-value=2e-17 Score=161.33 Aligned_cols=218 Identities=17% Similarity=0.054 Sum_probs=155.7
Q ss_pred ChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHH
Q 014163 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (429)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~ 169 (429)
.|...++|+. +++++|.+. .+++++|+.|+..++.++.. .+++|+++.+.|.+...
T Consensus 52 np~~~~lE~~----lA~l~g~~~-------~l~~~sG~~Ai~~~l~~ll~-------------~GD~Vlv~~~~y~~~~~ 107 (385)
T PRK08574 52 NPTLRPLEEA----LAKLEGGVD-------ALAFNSGMAAISTLFFSLLK-------------AGDRVVLPMEAYGTTLR 107 (385)
T ss_pred CccHHHHHHH----HHHHhCCCc-------EEEeCCHHHHHHHHHHHHhC-------------CCCEEEEcCCCchhHHH
Confidence 4566666655 888898763 77889999999988887644 23689999999988665
Q ss_pred HH---HhcCceeEEEeccCCccccCHHHHHHHhhh-CCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeec
Q 014163 170 FA---RYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (429)
Q Consensus 170 ~~---~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~ 245 (429)
.+ ...|++++.++ +|++++++++++ +|++|++.+++||+|.+.|+++|+++|+++ |+++++|+
T Consensus 108 ~~~~~~~~g~~v~~~~-------~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~~la~~~------gi~livD~ 174 (385)
T PRK08574 108 LLKSLEKFGVKVVLAY-------PSTEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVAKAAKEL------GAILVVDN 174 (385)
T ss_pred HHHHhhccCcEEEEEC-------CCHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHHHHHHHc------CCEEEEEC
Confidence 55 44577766543 467899999998 899999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCC--eEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchh
Q 014163 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSS 323 (429)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~ 323 (429)
+|+.+.. .... . .++|+++.|.+|++.+|.+ .|++++++++.. ..+.....+. |.. .
T Consensus 175 t~a~~~~---~~~l--~---~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~-~~~~~~~~~~----------g~~--~ 233 (385)
T PRK08574 175 TFATPLL---YRPL--R---HGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFL-EELWEWRRRL----------GTI--M 233 (385)
T ss_pred CCCcccc---CChh--h---hCCcEEEeeCceeecCCCCceeEEEEECcHHHH-HHHHHHHHhc----------CCC--C
Confidence 9975432 1111 1 3689999999999987654 365666544322 2221111111 111 1
Q ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEe
Q 014163 324 QIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEIL 367 (429)
Q Consensus 324 ~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 367 (429)
.....|.+++ +.+.+..++++..+++.++.+.|++.|.++-+
T Consensus 234 ~p~~a~l~l~--~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V 275 (385)
T PRK08574 234 QPFEAYLVLR--GLKTLEVRFERQCRNAMAIAEFLSEHPKVAEV 275 (385)
T ss_pred CHHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHHcCCCcCEE
Confidence 2233444444 33457788899999999999999999977533
No 240
>PRK04311 selenocysteine synthase; Provisional
Probab=99.77 E-value=1.5e-16 Score=157.19 Aligned_cols=286 Identities=15% Similarity=0.088 Sum_probs=177.4
Q ss_pred CChHHHHHHHHHHcCcCC---CCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNY---VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~ 143 (429)
+.++.+.+++..++.... .++...+..... +.+.+.+++++|.+. ..++++++.|+.+++.++ .
T Consensus 97 ~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~-~~~e~~lA~l~Gae~-------a~vv~sgtaAl~l~l~~l-~---- 163 (464)
T PRK04311 97 LLSEAAIEAVTEAARGYSNLEYDLATGKRGSRD-RALAALLCALTGAED-------ALVVNNNAAAVLLALNAL-A---- 163 (464)
T ss_pred CCCHHHHHHHHHHHhcccccccchhhcccchHH-HHHHHHHHHHhCCCe-------EEEECCHHHHHHHHHHHh-C----
Confidence 345667888777765432 111112222222 356677999999874 778888999998877553 1
Q ss_pred HHHhcCCCCCCcEEEEcCCCchH------HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCc--c
Q 014163 144 KRKEQGKPYDKPNIVTGANVQVC------WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL--T 215 (429)
Q Consensus 144 ~~~~~g~~~~~~~vi~~~~~h~s------~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~--t 215 (429)
.+++|++++..|+. +...++..|+++++++.+. ..++++++++|+++|++|++++++|+ +
T Consensus 164 ---------~GdeVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~---~t~~~dle~aI~~~TklV~~vh~sN~~i~ 231 (464)
T PRK04311 164 ---------AGKEVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTN---RTHLRDYEQAINENTALLLKVHTSNYRIE 231 (464)
T ss_pred ---------CCCEEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCCC---CCCHHHHHHhcCccCeEEEEEcCCCcccc
Confidence 23689999876652 3445677899999987643 36899999999999999999999997 3
Q ss_pred c--cccChHHHHHHHHHhhhccCCCccEEeecccccccc--ccc-CCCCc-cccCCCCeeEEEEcCcccCCCCCCeEEEE
Q 014163 216 G--EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIA--PFL-YPDLE-WDFRLPLVKSINVSGHKYGLVYAGVGWVV 289 (429)
Q Consensus 216 G--~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~--~~~-~~~~~-~~~~~~~~d~~~~s~hK~~~~p~g~g~l~ 289 (429)
| ...|+++|+++||+| |+++++|+++|...- .+. ..+.. .+.-..++|++++|+|||+++|. .|+++
T Consensus 232 G~~~~~dl~eI~~lak~~------gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~-~G~i~ 304 (464)
T PRK04311 232 GFTKEVSLAELAALGKEH------GLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQ-AGIIV 304 (464)
T ss_pred ccCCcCCHHHHHHHHHHc------CCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCCc-eEEEE
Confidence 4 567999999999999 999999997653210 010 00110 01112479999999999998885 78887
Q ss_pred EeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHc-C----------HHHHHHHHHHHHHHHHHHHHHH
Q 014163 290 WRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL-G----------FEGYKNIMENCMGNARALREGL 358 (429)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l-~----------~~g~~~~~~~~~~~~~~l~~~L 358 (429)
.+++ .+ +.+...+ ..... .-......++.+.+..+ . ...+....++..++++.+.++|
T Consensus 305 g~~~-li-~~l~~~~-~~r~l--------r~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L 373 (464)
T PRK04311 305 GKKE-LI-ARLKKHP-LKRAL--------RVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAAL 373 (464)
T ss_pred EcHH-HH-HHHhhch-hHHHH--------hcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHH
Confidence 7542 22 2111100 00000 00012222333334321 1 1113344577777889999999
Q ss_pred HhCC--C--eEEeeCC----------CCceEEEEEecCCCCCCHHHHHHHHH
Q 014163 359 EKTG--R--FEILSKD----------VGVPLVAFSLKDSSAHTVFEISEGLR 396 (429)
Q Consensus 359 ~~~~--~--~~~~~~~----------~~~~~v~f~~~~~~~~~~~~~~~~L~ 396 (429)
++.+ + +++.... ...+.+++.+.+. ..+..++.++|+
T Consensus 374 ~~~~~~~~~~~~~~~~~~~gggs~p~~~~~~~~v~~~~~-~~~~~~l~~~lr 424 (464)
T PRK04311 374 KAALGAAFAVEVVPSFSQVGGGSLPVDRLPSAAVTLTPK-DRSLEALAARLR 424 (464)
T ss_pred HhccCCCeeEEEEEccCccCCCCCcCCCCCeEEEEEeCC-CCCHHHHHHHHh
Confidence 8764 2 3455331 1245566666543 467888888887
No 241
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.77 E-value=1.5e-16 Score=152.18 Aligned_cols=301 Identities=17% Similarity=0.074 Sum_probs=201.1
Q ss_pred ChHHHHHHHHHHcCcCCCCCccCh---hhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHH
Q 014163 68 MEPECDKLVMASINKNYVDMDEYP---VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (429)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~ 144 (429)
.+|.+.+++.+++.........+. +...+-.++.+.+|+++|.+. ..+-++|=.||..++.++..
T Consensus 54 ~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~e~-------al~f~SGy~AN~~~i~~l~~----- 121 (388)
T COG0156 54 SHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFLGAEA-------ALLFSSGFVANLGLLSALLK----- 121 (388)
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCc-------EEEEcccchhHHHHHHHhcC-----
Confidence 457788888777766432222222 444444455556999999985 55556677788877777654
Q ss_pred HHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhh------CCeEEEEeeCCCccccc
Q 014163 145 RKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE------NTICVAAILGSTLTGEF 218 (429)
Q Consensus 145 ~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~------~~~~v~~~~~~~~tG~~ 218 (429)
.++.|+..+..|.|+...++..+++++..+ .-|+++||+++++ +.++|+.-..=+..|.+
T Consensus 122 --------~~dli~~D~lnHASiidG~rls~a~~~~f~------HnD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdi 187 (388)
T COG0156 122 --------KGDLIFSDELNHASIIDGIRLSRAEVRRFK------HNDLDHLEALLEEARENGARRKLIVTEGVFSMDGDI 187 (388)
T ss_pred --------CCcEEEEechhhhhHHHHHHhCCCcEEEec------CCCHHHHHHHHHhhhccCCCceEEEEeccccCCCCc
Confidence 236777788899999999999999987775 2578999999987 23555555556678999
Q ss_pred cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCc---cccCC--CCeeEEEEcCcccCCCCCCeEEEEEeCC
Q 014163 219 EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE---WDFRL--PLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (429)
Q Consensus 219 ~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~---~~~~~--~~~d~~~~s~hK~~~~p~g~g~l~~~~~ 293 (429)
.|+++|++++++| ++|++||+||+.++. .+.-+ ..+++ ..+|++..+.-|.+++ .| |+ +..+.
T Consensus 188 ApL~~l~~L~~ky------~a~L~VDEAHa~Gv~---G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs-~G-g~-v~g~~ 255 (388)
T COG0156 188 APLPELVELAEKY------GALLYVDEAHAVGVL---GPNGRGLAEHFGLEPEEVDIIVGTLGKALGS-SG-GY-IAGSA 255 (388)
T ss_pred CCHHHHHHHHHHh------CcEEEEEcccccccc---CCCCccHHHHhCCCCccceEEEEEchhhhcc-cC-ce-eeCcH
Confidence 9999999999999 999999999987653 32211 12232 2469999999998763 22 33 33332
Q ss_pred CCccccccc-ccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCC
Q 014163 294 DDLPDELVF-HINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVG 372 (429)
Q Consensus 294 ~~~~~~~~~-~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 372 (429)
.+.+.+.. ...|+.+. +.+...+.+...+++.+.. ..+..++.+++..++++.++..+ +.+. +..
T Consensus 256 -~~~d~L~~~ar~~ifSt--------alpP~~aaa~~~al~~l~~--~~~~r~~L~~~~~~~~~~~~~~~-~~~~--~s~ 321 (388)
T COG0156 256 -ALIDYLRNRARPFIFST--------ALPPAVAAAALAALRILEE--GPERRERLQELAAFFRSLLKALG-LVLL--PSE 321 (388)
T ss_pred -HHHHHHHHhCCceeccC--------CCCHHHHHHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHhcC-CccC--CCC
Confidence 22222222 23333332 3333445556666666543 36778888899999997777665 5543 225
Q ss_pred ceEEEEEecCCCCCCHHHHHHHHHHHHhccCceeccc-CCCCCCCceEEEEEecc
Q 014163 373 VPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK-LPMSYPWSTKLRVISHL 426 (429)
Q Consensus 373 ~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~-~~~~~~~~~~lRi~~~~ 426 (429)
.+++.+.+.++ ....++...|+ ++|+.+... .|+...+..-||+|++.
T Consensus 322 s~I~pv~~gd~--~~a~~~s~~l~----~~Gi~v~~i~~PTVp~gtarlRi~lta 370 (388)
T COG0156 322 SPIIPVILGDE--ERALEASRALL----EEGIYVSAIRPPTVPKGTARLRITLTA 370 (388)
T ss_pred CCeeeeEeCCH--HHHHHHHHHHH----HCCeeEeeecCCCCCCCcceEEEEecC
Confidence 77887776442 23445555555 889999888 78778888899999864
No 242
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.77 E-value=5.9e-17 Score=156.37 Aligned_cols=289 Identities=13% Similarity=0.106 Sum_probs=181.5
Q ss_pred cCCChHHHHHH-HHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHH
Q 014163 65 TTWMEPECDKL-VMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (429)
Q Consensus 65 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~ 143 (429)
++..++.+.+. +..+.-.. -.|..+|...+||++ +++++|.+. .+.|++||.|++++..+...
T Consensus 45 tDsgT~aMs~~q~a~~~~GD-e~yag~~s~~~lE~~----va~~~G~~~-------av~v~sGT~Al~ll~~l~l~---- 108 (450)
T TIGR02618 45 TDSGTNAMSDKQWAGLMMGD-EAYAGSRNFYHLERT----VRELYGFKY-------VVPTHQGRGAENLLSQIAIK---- 108 (450)
T ss_pred cCCCcHHHHHHHHHHhhhcc-hhhcCCCcHHHHHHH----HHHHHCCCe-------EEEcCCHHHHHHHHHHhCCC----
Confidence 33445666665 33333211 236778888888877 788899975 89999999997764322211
Q ss_pred HHHhcCCCCCCcEEEEcCCCchHHHHH-HHhcCceeEEEecc---------CCccccCHHHHHHHhhhC----CeEEEEe
Q 014163 144 KRKEQGKPYDKPNIVTGANVQVCWEKF-ARYFEVELKEVKLE---------EGYYVMNPVKAVELVDEN----TICVAAI 209 (429)
Q Consensus 144 ~~~~~g~~~~~~~vi~~~~~h~s~~~~-~~~~G~~v~~v~~~---------~~~~~~d~~~l~~~i~~~----~~~v~~~ 209 (429)
+ +++| +.++|+....+ ....|+.+..++.+ +.+|.+|+++|+++|+++ +.+|.+.
T Consensus 109 ----p-----GDeV--psn~~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e 177 (450)
T TIGR02618 109 ----P-----GDYV--PGNMYFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLA 177 (450)
T ss_pred ----C-----cCEE--CCceeHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEE
Confidence 1 2344 77888765555 68888866556443 334889999999999863 3466777
Q ss_pred eCCCcc-ccc---cChHHHHHHHHHhhhccCCCccEEeecccccccccccC---C---CCcc-cc---CCCCeeEEEEcC
Q 014163 210 LGSTLT-GEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY---P---DLEW-DF---RLPLVKSINVSG 275 (429)
Q Consensus 210 ~~~~~t-G~~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~---~---~~~~-~~---~~~~~d~~~~s~ 275 (429)
..+|.. |.. .++++|.++|++| |+++|.|+|+...-..|.. + +... .. -...+|++++|+
T Consensus 178 ~t~N~~GG~pvs~~~l~~I~elA~~~------Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD~~~~S~ 251 (450)
T TIGR02618 178 VTVNLAGGQPVSMANMREVRELCEAH------GIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYADGCTMSG 251 (450)
T ss_pred EecccCCCeeCCHHHHHHHHHHHHHc------CCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCcEEEEee
Confidence 777755 677 6789999999999 9999999999653222210 0 0000 00 134699999999
Q ss_pred cccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Q 014163 276 HKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALR 355 (429)
Q Consensus 276 hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~ 355 (429)
||-+++|.| |++++++++...+.-.....| .+..++ |...+..+.++..+|...-. +...++....+++|.
T Consensus 252 ~Kd~~~~~G-G~l~~~d~~l~~k~r~~~~~~--eG~~ty---Ggla~r~~~ala~gL~e~~~---~~y~~~r~~~a~~La 322 (450)
T TIGR02618 252 KKDCLVNIG-GFLCMNDDEMFQSAKELVVVF--EGMPSY---GGLAGRDMEAMAIGIREAVD---YEYIEHRVKQVRYLG 322 (450)
T ss_pred ccCCCCCCc-eEEEeCCHHHHHHHHHHhhhc--CCcccc---CchhhhhHHHHHHHHHHhhh---HHHHHHHHHHHHHHH
Confidence 999999886 666767765443322222233 222232 22222233334444433211 245566667899999
Q ss_pred HHHHhCCCeEEeeCCCCceEEEEEecC------CCCCCHHHHHHHHHH
Q 014163 356 EGLEKTGRFEILSKDVGVPLVAFSLKD------SSAHTVFEISEGLRK 397 (429)
Q Consensus 356 ~~L~~~~~~~~~~~~~~~~~v~f~~~~------~~~~~~~~~~~~L~~ 397 (429)
+.|.+.+ +.++.+. ..+.+.+.... ........++..|..
T Consensus 323 ~~L~~~G-vpv~~p~-ggh~V~vda~~~lph~~~~~~p~~al~~~ly~ 368 (450)
T TIGR02618 323 DKLKAAG-VPIVEPV-GGHAVFLDARRFLPHIPQDQFPAQSLAASIYV 368 (450)
T ss_pred HHHHHCC-CcccCCC-CcceEEEEhHHhCCCCChhhChHHHHHHHHHH
Confidence 9999985 8887654 66777676532 123456677777773
No 243
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=5e-17 Score=160.16 Aligned_cols=241 Identities=15% Similarity=0.049 Sum_probs=161.6
Q ss_pred HHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHH----HHHHhc
Q 014163 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE----KFARYF 174 (429)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~----~~~~~~ 174 (429)
++.+.++++.|.+. .+.+++|+.|+.+++.++.. .+++|+++...|.+.. ..+...
T Consensus 73 ~le~~la~l~g~~~-------~v~fsSG~~Ai~~al~~ll~-------------~Gd~VI~~~~~y~~t~~~~~~~l~~~ 132 (437)
T PRK05613 73 ALENRIASLEGGVH-------AVAFASGQAAETAAILNLAG-------------AGDHIVTSPRLYGGTETLFLVTLNRL 132 (437)
T ss_pred HHHHHHHHHhCCCe-------EEEeCCHHHHHHHHHHHhcC-------------CCCEEEECCCccHHHHHHHHHHHHhc
Confidence 44455899999853 66777777888877776532 2368999999998753 455778
Q ss_pred CceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccc
Q 014163 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (429)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (429)
|+++++++ +. .|+++++++++++|++|++.+++|++|.+.|+++|+++|+++ |+++|||++++.+..
T Consensus 133 Gi~v~~vd-~~----~d~e~l~~~l~~~tk~V~~e~~~Np~~~v~di~~I~~la~~~------gi~livD~t~a~g~~-- 199 (437)
T PRK05613 133 GIEVTFVE-NP----DDPESWQAAVQPNTKAFFGETFANPQADVLDIPAVAEVAHRN------QVPLIVDNTIATAAL-- 199 (437)
T ss_pred CeEEEEEC-CC----CCHHHHHHhCCccCeEEEEECCCCCCCcccCHHHHHHHHHHc------CCeEEEECCCccccc--
Confidence 99999997 32 288999999999999999999999999999999999999999 999999999975432
Q ss_pred cCCCCccccCCCCeeEEEEcCcccCCCC-CCeEEEEEeCCCCccc-------ccc--cccCCCCCCC-----CC------
Q 014163 255 LYPDLEWDFRLPLVKSINVSGHKYGLVY-AGVGWVVWRTKDDLPD-------ELV--FHINYLGSDQ-----PT------ 313 (429)
Q Consensus 255 ~~~~~~~~~~~~~~d~~~~s~hK~~~~p-~g~g~l~~~~~~~~~~-------~~~--~~~~~~~~~~-----~~------ 313 (429)
..+ .+ .++|++++|+|||+.++ .++|.+++.+...... .+. ..+.+..... ..
T Consensus 200 ~~p---~~---~GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (437)
T PRK05613 200 VRP---LE---LGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLK 273 (437)
T ss_pred cCh---HH---hCCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHH
Confidence 111 11 36999999999998765 3455555533221000 000 0000000000 00
Q ss_pred ----c-eeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC-----------------
Q 014163 314 ----F-TLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV----------------- 371 (429)
Q Consensus 314 ----~-~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----------------- 371 (429)
+ ...|.. ......|..+ .|.+.+..++++..+++..+.+.|+++|.++-+.-|.
T Consensus 274 ~~~~~~~~~G~~--~~p~~a~l~~--rgl~TL~lR~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~~g 349 (437)
T PRK05613 274 ARAGLLRDTGAT--LSPFNAWVTA--QGLDTLSLRLERHNENAIKVAEFLNNHEKVAKVNFAGLKDSPWYATKEKLGLKY 349 (437)
T ss_pred HHHHHHHhcCCC--CCHHHHHHHH--cccCcHHHHHHHHHHHHHHHHHHHHcCCCcceEECCCCCCCccHHHHHHhcCCC
Confidence 0 000111 1223344333 3556688999999999999999999999875433221
Q ss_pred CceEEEEEecC
Q 014163 372 GVPLVAFSLKD 382 (429)
Q Consensus 372 ~~~~v~f~~~~ 382 (429)
..++++|.+++
T Consensus 350 ~gg~~sf~l~~ 360 (437)
T PRK05613 350 TGSVLSFDIKG 360 (437)
T ss_pred CceEEEEEecC
Confidence 14589999863
No 244
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.77 E-value=7.9e-17 Score=158.70 Aligned_cols=246 Identities=15% Similarity=0.050 Sum_probs=165.2
Q ss_pred ChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHH
Q 014163 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (429)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~ 169 (429)
.|....|| +.++++.|.+. .+++++|+.|+..++.++.. .+++|+++...|.+...
T Consensus 68 ~p~~~~Le----~~lA~l~g~~~-------av~~sSG~aAi~~al~all~-------------~Gd~Vv~~~~~y~~t~~ 123 (436)
T PRK07812 68 NPTQDVVE----QRIAALEGGVA-------ALLLASGQAAETFAILNLAG-------------AGDHIVSSPRLYGGTYN 123 (436)
T ss_pred CchHHHHH----HHHHHHhCCCe-------EEEEccHHHHHHHHHHHHhC-------------CCCEEEEeCCcchHHHH
Confidence 34555555 45889999864 78888999999988877654 13688888887765443
Q ss_pred ----HHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeec
Q 014163 170 ----FARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (429)
Q Consensus 170 ----~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~ 245 (429)
.+...|++++.++ +. .|+++++++++++|++|++.+++|++|.+.|+++|+++||++ |++++||+
T Consensus 124 ~~~~~l~~~Gi~v~~vd-d~----~d~e~l~~ai~~~tklV~ie~~sNp~G~v~Dl~~I~~la~~~------gi~liVD~ 192 (436)
T PRK07812 124 LFHYTLPKLGIEVSFVE-DP----DDLDAWRAAVRPNTKAFFAETISNPQIDVLDIPGVAEVAHEA------GVPLIVDN 192 (436)
T ss_pred HHHHHhhcCeEEEEEEC-CC----CCHHHHHHhCCCCCeEEEEECCCCCCCeecCHHHHHHHHHHc------CCEEEEEC
Confidence 3455788887775 22 389999999999999999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCC-eEEEEEeCCCC-cccc-----cccccCCCCC---C--CCC
Q 014163 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG-VGWVVWRTKDD-LPDE-----LVFHINYLGS---D--QPT 313 (429)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g-~g~l~~~~~~~-~~~~-----~~~~~~~~~~---~--~~~ 313 (429)
+++.+.. .. .. ..++|.++.|+|||++++.+ +|.+++.+... .... ....+.|... . ...
T Consensus 193 t~a~~~~---~~--pl---~~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (436)
T PRK07812 193 TIATPYL---IR--PL---EHGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPA 264 (436)
T ss_pred CCccccc---CC--ch---hcCCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhH
Confidence 9975332 11 11 13699999999999976533 56666543211 0000 0001111110 0 000
Q ss_pred ---------ceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCC--------------
Q 014163 314 ---------FTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKD-------------- 370 (429)
Q Consensus 314 ---------~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-------------- 370 (429)
....|.. ......|.. ..|...+..++++..+++..+.+.|+++|.++-+..|
T Consensus 265 ~~~~~~~~~~~~~G~~--l~p~~a~l~--~rgl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~ 340 (436)
T PRK07812 265 YALKARVQLLRDLGSA--ISPFNAFLI--AQGLETLSLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAKRL 340 (436)
T ss_pred HHHHHHHHHHHhcCCC--CCHHHHHHH--hcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHh
Confidence 0000111 122333333 3456778999999999999999999999987544322
Q ss_pred --C-CceEEEEEecC
Q 014163 371 --V-GVPLVAFSLKD 382 (429)
Q Consensus 371 --~-~~~~v~f~~~~ 382 (429)
. ..++++|.+++
T Consensus 341 ~~~g~gg~~sf~l~~ 355 (436)
T PRK07812 341 APKGTGAVLSFELAG 355 (436)
T ss_pred CcCCCceEEEEEecC
Confidence 0 24589999864
No 245
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.76 E-value=1.7e-16 Score=152.31 Aligned_cols=252 Identities=15% Similarity=0.062 Sum_probs=160.4
Q ss_pred HHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCcee
Q 014163 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVEL 178 (429)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v 178 (429)
++++.+++.+|.+. +++|+|+++++.+++.. . .++.|++++++|..+..+++..|+++
T Consensus 53 ~Lr~~ia~~~~~~~-------I~it~Gs~~al~~~~~~--~-------------~gd~v~v~~P~y~~~~~~~~~~g~~~ 110 (330)
T PRK05664 53 GLEAAARAYYGAPQ-------LLPVAGSQAAIQALPRL--R-------------APGRVGVLSPCYAEHAHAWRRAGHQV 110 (330)
T ss_pred HHHHHHHHHhCCCC-------EEECcCHHHHHHHHHHc--c-------------CCCEEEEcCCChHHHHHHHHHcCCeE
Confidence 44566888888642 89999999998876431 1 13689999999999999999999999
Q ss_pred EEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccC---hHHHHHHHHHhhhccCCCccEEeeccccccccccc
Q 014163 179 KEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (429)
Q Consensus 179 ~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (429)
+.+|++ ++++.++ +++++++++|+||||.+.+ +++|+++|+++ ++++++|++|..+. +.
T Consensus 111 ~~v~~~---------~~~~~~~-~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~------~~~iI~DE~y~~~~-~~- 172 (330)
T PRK05664 111 RELDEA---------EVEAALD-SLDVLVVVNPNNPTGRRFDPARLLAWHARLAAR------GGWLVVDEAFMDNT-PQ- 172 (330)
T ss_pred EEechh---------hHhhhhc-CCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhc------CCEEEEECCcccCC-Cc-
Confidence 988763 2444453 6778899999999999965 55666667889 99999999997542 10
Q ss_pred CCCCcccc-CCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHH
Q 014163 256 YPDLEWDF-RLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIR 334 (429)
Q Consensus 256 ~~~~~~~~-~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~ 334 (429)
+.. ..+ ..+++-.+...++-+++++.++||++.. ++.. +.+..... .+ +- ....+.++...
T Consensus 173 -~s~-~~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~-~~l~-~~~~~~~~-------~~----~~---~~~~~~~~~~~ 234 (330)
T PRK05664 173 -HSL-AACAHRPGLIVLRSFGKFFGLAGARLGFVLAE-PALL-RALAELLG-------PW----TV---SGPTRWLAQAA 234 (330)
T ss_pred -ccc-cccccCCCEEEEeeccccccCCCcceEEEEeC-HHHH-HHHHHhcC-------CC----CC---CHHHHHHHHHH
Confidence 111 111 1123434443344455699999999863 2222 22211111 01 01 11223333333
Q ss_pred cC-HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCC
Q 014163 335 LG-FEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMS 413 (429)
Q Consensus 335 l~-~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~ 413 (429)
+. ....++..++..++++++.+.|++.+ ++.. .....++.++.+ +..++.+.|. ++|+.+..+.
T Consensus 235 L~~~~~~~~~~~~~~~~r~~l~~~L~~~~-~~~~--~~~~~f~~~~~~-----~~~~~~~~l~----~~gi~v~~f~--- 299 (330)
T PRK05664 235 LADTPWQRRQRERLLAASQRLAALLRRHG-LTPA--GGCALFQWVRTE-----DAAALHEFLA----RRGILTRLFE--- 299 (330)
T ss_pred HhChHHHHHHHHHHHHHHHHHHHHHHHCC-Cccc--CCcceEEEEecC-----CHHHHHHHHH----HCCeEEEECC---
Confidence 32 23345667778888999999999875 4321 111233333321 4567777777 8999997531
Q ss_pred CCCceEEEEEec
Q 014163 414 YPWSTKLRVISH 425 (429)
Q Consensus 414 ~~~~~~lRi~~~ 425 (429)
...++||+++
T Consensus 300 --~~~~iRis~~ 309 (330)
T PRK05664 300 --QPASLRFGLP 309 (330)
T ss_pred --CCCeEEEECC
Confidence 2347999998
No 246
>PRK06460 hypothetical protein; Provisional
Probab=99.76 E-value=5.8e-17 Score=157.77 Aligned_cols=233 Identities=16% Similarity=0.082 Sum_probs=158.1
Q ss_pred ChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCC----ch
Q 014163 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANV----QV 165 (429)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~----h~ 165 (429)
.|...++| +.+++++|.+. .++.++|++|+..++.++.. .+++|+++.+. +.
T Consensus 44 ~p~~~~L~----~~lA~l~g~~~-------~v~~~sG~~ai~~~l~al~~-------------~Gd~Vl~~~~~~~~ty~ 99 (376)
T PRK06460 44 NPTVLELT----KKIVELENAEM-------GVAFSSGMGAISTTALALLK-------------PGNSVLVHRDMFGRSYR 99 (376)
T ss_pred CccHHHHH----HHHHHHhCCCc-------EEEeCCHHHHHHHHHHHHhC-------------CCCEEEEecCCcCcHHH
Confidence 34555555 45889999864 45556778898888777644 13578887653 34
Q ss_pred HHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeec
Q 014163 166 CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (429)
Q Consensus 166 s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~ 245 (429)
.+...++..|++++.++.++ .+.+++.++++|++|++++++||+|.+.|+++|+++|+++ |+++++|+
T Consensus 100 ~~~~~~~~~G~~v~~~~~~~------~~~l~~~~~~~tklV~l~sp~NPtG~v~d~~~I~~la~~~------g~~vivDe 167 (376)
T PRK06460 100 FFTDYLKNWGVNVDASNPGS------DNIIEKAKSKRYDVVFVENITNPLLRVVDITELSKVCKEN------GSILIVDA 167 (376)
T ss_pred HHHHHHHhhCcEEEEECCCC------HHHHHHhcCCCceEEEEECCCCCCCcccCHHHHHHHHHHc------CCEEEEEC
Confidence 46677888899988887543 2345666677899999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCCccccCCCCeeEEEEcCcccCCCCC--CeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchh
Q 014163 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYA--GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSS 323 (429)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~--g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~ 323 (429)
+|+.+.. .. ... .++|+++.+.+|+++++. ..|+++. +++.. +.+.......+. +.
T Consensus 168 a~~~~~~--~~---~l~---~~~divv~S~sK~l~G~~~~~~G~~~~-~~~l~-~~l~~~~~~~g~---------~~--- 225 (376)
T PRK06460 168 TFSTPIN--QK---PLE---LGADIVVHSASKFLAGHNDVIAGLAAG-YGKLL-NVIDQMRRTLGT---------SL--- 225 (376)
T ss_pred CcCcccc--CC---hhh---cCCCEEEeecceeccCCCCceEEEEec-CHHHH-HHHHHHHHhcCC---------CC---
Confidence 9975321 11 111 247999999999986543 3677664 33322 222111111111 11
Q ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCC----------------CCceEEEEEecC
Q 014163 324 QIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKD----------------VGVPLVAFSLKD 382 (429)
Q Consensus 324 ~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~----------------~~~~~v~f~~~~ 382 (429)
.....|.+++ +.+.++.++++..++++++.+.|++.|.++-+.-| ...++++|.+++
T Consensus 226 ~~~~a~~~l~--~~~~l~~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~ 298 (376)
T PRK06460 226 DPHAAYLTLR--GIKTLKIRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNG 298 (376)
T ss_pred CHHHHHHHHh--chhhHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcC
Confidence 1223454443 44667888999999999999999999877543322 135789999864
No 247
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.76 E-value=3.3e-17 Score=160.90 Aligned_cols=233 Identities=16% Similarity=0.126 Sum_probs=163.6
Q ss_pred ChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchH---
Q 014163 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC--- 166 (429)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s--- 166 (429)
.|...++| +.+++++|.+. .+++++|+.|+.+++.++.. .+++|+++.+.|..
T Consensus 64 ~p~~~~le----~~lA~l~g~~~-------~i~~~sG~~Al~~~l~~ll~-------------~Gd~Viv~~~~y~~t~~ 119 (403)
T PRK07503 64 NPTLALLE----QRMASLEGGEA-------AVALASGMGAITATLWTLLR-------------PGDEVIVDQTLYGCTFA 119 (403)
T ss_pred CchHHHHH----HHHHHHhCCCc-------EEEEcCHHHHHHHHHHHHcC-------------CCCEEEEccCccchHHH
Confidence 34555555 45899999864 67788899998888876533 23689998887754
Q ss_pred -HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeec
Q 014163 167 -WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (429)
Q Consensus 167 -~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~ 245 (429)
+...++..|++++.++.+ |+++++++++++|++|++.+++||+|.+.|+++|+++|+++ |+++++|+
T Consensus 120 ~~~~~~~~~G~~v~~vd~~------d~~~l~~~i~~~tklV~le~p~NPtG~~~di~~I~~la~~~------gi~lIvD~ 187 (403)
T PRK07503 120 FLHHGLGEFGVTVRHVDLT------DPAALKAAISDKTRMVYFETPANPNMRLVDIAAVAEIAHGA------GAKVVVDN 187 (403)
T ss_pred HHHHHHhhCCEEEEEeCCC------CHHHHHHhcCccCcEEEEeCCCCCCCeeeCHHHHHHHHHHc------CCEEEEEC
Confidence 334566789998888753 68999999999999999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCC--eEEEEEeCCCCcccccccc--cCCCCCCCCCceeccCCc
Q 014163 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFH--INYLGSDQPTFTLNFSKG 321 (429)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g--~g~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~tr~ 321 (429)
+|+.+. ... +. . .++|.++.|.+|+++++.+ .|+++ .+++.. ..+... ..+. |..
T Consensus 188 a~a~~~---~~~--~l--~-~g~Di~v~S~tK~l~g~gd~~gG~v~-~~~~l~-~~l~~~~~~~~~----------g~~- 246 (403)
T PRK07503 188 TYCTPY---LQR--PL--E-LGADLVVHSATKYLGGHGDITAGLVV-GGKALA-DRIRLEGLKDMT----------GAV- 246 (403)
T ss_pred CCcccc---cCC--ch--h-hCCCEEEccccccccCCCceeEEEEE-cCHHHH-HHHHhhhHHhCc----------CCC-
Confidence 997532 111 11 1 2589999999999987543 57665 444322 222110 1111 222
Q ss_pred hhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC----------------CceEEEEEecC
Q 014163 322 SSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV----------------GVPLVAFSLKD 382 (429)
Q Consensus 322 ~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----------------~~~~v~f~~~~ 382 (429)
...+.+|..++. .+.+..++++..+++..+.+.|+++|.++.+..|. ..++++|.+++
T Consensus 247 -~s~~~a~l~l~~--L~tl~~r~~~~~~na~~~a~~L~~~p~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~~~~ 320 (403)
T PRK07503 247 -MSPFDAFLLMRG--LKTLALRMDRHCASAQAVAEWLARHPAVELVHYPGLPSFAQHALAQRQMALPGGMIAFELKG 320 (403)
T ss_pred -CCHHHHHHHHcC--cchHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEECC
Confidence 233344555543 35567888888899999999999998776443221 24588888853
No 248
>PRK15029 arginine decarboxylase; Provisional
Probab=99.76 E-value=9.5e-17 Score=165.18 Aligned_cols=228 Identities=14% Similarity=0.055 Sum_probs=162.5
Q ss_pred HHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCcee
Q 014163 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVEL 178 (429)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v 178 (429)
++.+..|++||.+.+ -..++|+|.+|..++.+++. .++.|++++++|-|+..++.+.|+.+
T Consensus 209 eAq~~aA~~fgA~~t------~FlvNGST~gn~a~i~a~~~-------------~gd~Vlv~RN~HKSv~~al~L~ga~P 269 (755)
T PRK15029 209 ESEKYAARVFGADRS------WSVVVGTSGSNRTIMQACMT-------------DNDVVVVDRNCHKSIEQGLILTGAKP 269 (755)
T ss_pred HHHHHHHHHhCCCcE------EEEeCChhHHHHHHHHHhcC-------------CCCEEEeecccHHHHHHHHHHcCCeE
Confidence 555679999999852 67888999999988887765 23689999999999999999999999
Q ss_pred EEEeccCCc----cccC-----HHHHHHHhhhCC--e--------EEEEeeCCCccccccChHHHHHHHHHhhhccCCCc
Q 014163 179 KEVKLEEGY----YVMN-----PVKAVELVDENT--I--------CVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDT 239 (429)
Q Consensus 179 ~~v~~~~~~----~~~d-----~~~l~~~i~~~~--~--------~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~ 239 (429)
++++...+. +.++ ++.++++|...+ + ++++++|| +-|.+.++++|+++|+++ ++
T Consensus 270 vyl~P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PT-Y~Gv~~di~~I~~~~h~~------~~ 342 (755)
T PRK15029 270 VYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCT-YDGVCYNAKEAQDLLEKT------SD 342 (755)
T ss_pred EEecccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCC-CcceeeCHHHHHHHHHhc------CC
Confidence 999754211 2344 999999997643 3 78888885 559999999999999999 99
Q ss_pred cEEeecccccccccccCCCCcc--cc-----CCCCee-EEEEcCcccCCCCCCeEEEEEeCCC-Ccc-cccccccCCCCC
Q 014163 240 PIHVDAASGGFIAPFLYPDLEW--DF-----RLPLVK-SINVSGHKYGLVYAGVGWVVWRTKD-DLP-DELVFHINYLGS 309 (429)
Q Consensus 240 ~l~vD~a~~~~~~~~~~~~~~~--~~-----~~~~~d-~~~~s~hK~~~~p~g~g~l~~~~~~-~~~-~~~~~~~~~~~~ 309 (429)
+++||+|||+++. +.+..+. -+ ...++| .++-|.||.+.+-...+++.+++.. .+. +.+...-.....
T Consensus 343 ~llvDEAhGah~~--F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~~id~~r~~~~l~~~qS 420 (755)
T PRK15029 343 RLHFDEAWYGYAR--FNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMMHAT 420 (755)
T ss_pred eEEEECccccccc--cCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCccccCHHHHHHHHHHHcC
Confidence 9999999988653 3333331 11 114688 8999999999998888999886541 111 111111111211
Q ss_pred CCCCceeccCCchhHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHHHHHHhCCC
Q 014163 310 DQPTFTLNFSKGSSQIIAQYYQFIRLGF-EGYKNIMENCMGNARALREGLEKTGR 363 (429)
Q Consensus 310 ~~~~~~~~~tr~~~~~~~~~~al~~l~~-~g~~~~~~~~~~~~~~l~~~L~~~~~ 363 (429)
.|++...+.++-.+.+.+.. .| ++.+++..+.+..+++.|.++++
T Consensus 421 --------TSPSY~LmASLD~ar~~m~~~~G-~~l~~~~i~~~~~~r~~l~~~~~ 466 (755)
T PRK15029 421 --------TSPLYAICASNDVAVSMMDGNSG-LSLTQEVIDEAVDFRQAMARLYK 466 (755)
T ss_pred --------CCcHHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhccc
Confidence 23333444555555555554 34 66777788888889988887754
No 249
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.76 E-value=1.8e-16 Score=156.34 Aligned_cols=286 Identities=16% Similarity=0.115 Sum_probs=174.9
Q ss_pred CChHHHHHHHHHHcCcCC---CCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNY---VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~ 143 (429)
+.++.+.+++..++.... +++........ .+.+.+.+++++|.+. ..++++++.|+.+++.++ .
T Consensus 92 ~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r-~~~le~~lA~l~gae~-------alvv~sg~aAi~l~l~~l-~---- 158 (454)
T TIGR00474 92 PLAEEAIEAVTDAARGYSNLEYDLETGKRGSR-YSHVEGLLCELTGAED-------ALVVNNNAAAVLLALNTL-A---- 158 (454)
T ss_pred CCCHHHHHHHHHHHhcccchhccccccccchH-HHHHHHHHHHHhCCCc-------EEEECCHHHHHHHHHHHh-C----
Confidence 345667888777665421 11111222222 3466777999999975 567888888988777543 2
Q ss_pred HHHhcCCCCCCcEEEEcCCCch------HHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCcc--
Q 014163 144 KRKEQGKPYDKPNIVTGANVQV------CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT-- 215 (429)
Q Consensus 144 ~~~~~g~~~~~~~vi~~~~~h~------s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~t-- 215 (429)
.+++|++++..|. ++...++..|+++++++.+. ..|+++++++|+++|++|++++.+|++
T Consensus 159 ---------~GdeVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~---~~~l~dle~aI~~~T~lv~~~h~sN~~~~ 226 (454)
T TIGR00474 159 ---------KGKEVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTN---RTHLKDYEDAITENTALLLKVHTSNYRIV 226 (454)
T ss_pred ---------CcCEEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCCC---CCCHHHHHHhcCcCCEEEEEEccCccccc
Confidence 1368999987763 34456677899999887642 368999999999999999999999984
Q ss_pred c--cccChHHHHHHHHHhhhccCCCccEEeecccccccc--cccCCCCc--cccCCCCeeEEEEcCcccCCCCCCeEEEE
Q 014163 216 G--EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIA--PFLYPDLE--WDFRLPLVKSINVSGHKYGLVYAGVGWVV 289 (429)
Q Consensus 216 G--~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~--~~~~~~~~--~~~~~~~~d~~~~s~hK~~~~p~g~g~l~ 289 (429)
| .+.|+++|+++||++ |++++||++.|...- ++..+..+ .+....++|.+++|+|||+++|. .|+++
T Consensus 227 G~~~~~dl~~I~~la~~~------g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~-~G~i~ 299 (454)
T TIGR00474 227 GFTEEVSIAELVALGREH------GLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQ-AGIIV 299 (454)
T ss_pred CCCCCCCHHHHHHHHHHc------CCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCCe-EEEEE
Confidence 6 478999999999999 999999987543110 01000001 11222479999999999998885 68888
Q ss_pred EeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHc-----------CHHHHHHHHHHHHHHHHHHHHHH
Q 014163 290 WRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRL-----------GFEGYKNIMENCMGNARALREGL 358 (429)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l-----------~~~g~~~~~~~~~~~~~~l~~~L 358 (429)
.+++ .+ +.+... .+...-. ..+ .....+..++..+ +..-+....++..+++..+.++|
T Consensus 300 g~~~-~i-~~l~~~-~l~r~lr------~~k--~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L 368 (454)
T TIGR00474 300 GKKE-LI-ERLKKN-PLTRALR------VDK--LTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEELRARAERLAKRL 368 (454)
T ss_pred ECHH-HH-Hhhhhc-hhHHHHh------hCh--HHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHHHHHHHHHHHHH
Confidence 7642 22 211111 0000000 000 0111122222111 11223444567777888888888
Q ss_pred HhC--CC--eEEeeCC--------C--CceEEEEEecCCCCCCHHHHHHHHH
Q 014163 359 EKT--GR--FEILSKD--------V--GVPLVAFSLKDSSAHTVFEISEGLR 396 (429)
Q Consensus 359 ~~~--~~--~~~~~~~--------~--~~~~v~f~~~~~~~~~~~~~~~~L~ 396 (429)
++. ++ .++.... + ..+.+++.+.+. +.+..++.++|+
T Consensus 369 ~~~~~~~~~~~~~~~~~~~ggg~~p~~~l~~~~v~~~~~-~~~~~~l~~~lr 419 (454)
T TIGR00474 369 KAALGPGFELEIVPGLSQVGGGSLPDERLPSYAVTLTPD-GLSAEKLEARLR 419 (454)
T ss_pred HhhccCCceEEEEEcCCcccCCCCcCCCCCeEEEEEecC-CCCHHHHHHHHh
Confidence 774 33 3444432 1 234556665543 567788888887
No 250
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.76 E-value=2e-17 Score=142.70 Aligned_cols=164 Identities=18% Similarity=0.054 Sum_probs=127.9
Q ss_pred HHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHH-HHHHhcCce
Q 014163 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE-KFARYFEVE 177 (429)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~-~~~~~~G~~ 177 (429)
+++++++++++.+. ..+++++|+|+|+.+++.+++.. ++.|+++++.|++.. ..+...|++
T Consensus 4 ~~~~~l~~~~~~~~-----~~~~~~~~~t~a~~~~~~~~~~~-------------~~~v~~~~~~~~~~~~~~~~~~g~~ 65 (170)
T cd01494 4 ELEEKLARLLQPGN-----DKAVFVPSGTGANEAALLALLGP-------------GDEVIVDANGHGSRYWVAAELAGAK 65 (170)
T ss_pred HHHHHHHHHcCCCC-----CcEEEeCCcHHHHHHHHHHhCCC-------------CCEEEEeecccceehhhHHHhcCCE
Confidence 56778999996332 23889999999999999987541 257999999998877 788899999
Q ss_pred eEEEeccCCc-cccCHHHHHHHh-hhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeeccccccccccc
Q 014163 178 LKEVKLEEGY-YVMNPVKAVELV-DENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (429)
Q Consensus 178 v~~v~~~~~~-~~~d~~~l~~~i-~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (429)
++.++.+.+. ...+.+.+++.. .+++.+++++++++++|...|+++|.++|+++ ++++|+|++|+++.....
T Consensus 66 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~------~~~li~D~a~~~~~~~~~ 139 (170)
T cd01494 66 PVPVPVDDAGYGGLDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEY------GILLLVDAASAGGASPAP 139 (170)
T ss_pred EEEeccCCCCccchhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHc------CCEEEEeccccccccccc
Confidence 9999987542 222333554443 45789999999999999999999999999999 999999999987654211
Q ss_pred CCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEe
Q 014163 256 YPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWR 291 (429)
Q Consensus 256 ~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~ 291 (429)
. .+....++|+++.++||++++ .|+|++++|
T Consensus 140 --~--~~~~~~~~d~~~~s~~K~~~~-~~~G~l~~~ 170 (170)
T cd01494 140 --G--VLIPEGGADVVTFSLHKNLGG-EGGGVVIVK 170 (170)
T ss_pred --c--cccccccCCEEEEEcccccCC-CceEEEEeC
Confidence 1 122334699999999999977 899998864
No 251
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.76 E-value=1.5e-16 Score=153.15 Aligned_cols=253 Identities=14% Similarity=0.023 Sum_probs=162.7
Q ss_pred HHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCce
Q 014163 98 NRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVE 177 (429)
Q Consensus 98 ~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~ 177 (429)
.++++++++.+|++.. ..+++|+|+++++.+... +.. . ..|+++.++|..+..+++..|++
T Consensus 56 ~~L~~~ia~~~~~~~~----~~I~i~~Gs~e~i~~l~~-~~~-------------~-g~v~v~~P~y~~y~~~~~~~g~~ 116 (339)
T PRK06959 56 DGLAACAARYYGAPDA----AHVLPVAGSQAAIRALPA-LLP-------------R-GRVGIAPLAYSEYAPAFARHGHR 116 (339)
T ss_pred HHHHHHHHHHhCCCCc----ccEEECcCHHHHHHHHHH-hcC-------------C-CeEEEcCCCcHHHHHHHHHCCCE
Confidence 3667789999999631 138899999999875433 222 1 24888999999999999999999
Q ss_pred eEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHH---HHHhhhccCCCccEEeecccccccccc
Q 014163 178 LKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDL---LTKKNEETGWDTPIHVDAASGGFIAPF 254 (429)
Q Consensus 178 v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~l---a~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (429)
++.++.++ +. +.+.++++++++|+||||.+-+.+++.++ |+++ +.++++|++|..+..
T Consensus 117 ~~~v~~~~-------~~----~~~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~------~~~vI~DEay~~~~~-- 177 (339)
T PRK06959 117 VVPLDEAA-------DT----LPAALTHLIVVNPNNPTAERLPAARLLRWHAQLAAR------GGTLIVDEAFADTLP-- 177 (339)
T ss_pred EEeecccc-------hh----ccccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHc------CCEEEEECCCccCCC--
Confidence 98887643 11 22345689999999999999776666555 5677 899999999987531
Q ss_pred cCCCCcccc-CCCCeeEEEEcCcc-cCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHH
Q 014163 255 LYPDLEWDF-RLPLVKSINVSGHK-YGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (429)
Q Consensus 255 ~~~~~~~~~-~~~~~d~~~~s~hK-~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al 332 (429)
.+... .+ ..+++- +..|.-| +++++.++||++.. ++.. +.+..... .+. ...+++.++.
T Consensus 178 -~~s~~-~~~~~~~vi-~l~SfSK~~gl~GlRiGy~v~~-~~li-~~l~~~~~-------~~~-------vs~~~q~a~~ 238 (339)
T PRK06959 178 -AASLA-AHTDRPGLV-VLRSVGKFFGLAGVRAGFVLAA-PALL-AALRDALG-------AWT-------VSGPARHAVR 238 (339)
T ss_pred -cccch-hccCCCCEE-EEecChhhcCCcchheEEEecC-HHHH-HHHHHhcC-------CCC-------CcHHHHHHHH
Confidence 11111 11 123443 4445566 45689999998864 3222 22211110 111 1223455555
Q ss_pred HHcCH-HHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCC
Q 014163 333 IRLGF-EGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLP 411 (429)
Q Consensus 333 ~~l~~-~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~ 411 (429)
..+.. +..++..++..+.++++.+.|++++ +++. + ...++.++.. +..++.+.|. ++|+.++.+
T Consensus 239 ~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~g-~~~~--~-~~~f~~~~~~-----~~~~l~~~l~----~~GI~vr~~-- 303 (339)
T PRK06959 239 AAFADAAWQAAMRERLAADGARLAALLRAHG-FAVH--A-TPLFSWTDDP-----RAAALHAALA----RRGIWTRYF-- 303 (339)
T ss_pred HHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC-CCcc--C-cceEEEEeCC-----CHHHHHHHHH----hCCeEEEEC--
Confidence 55543 3456667888889999999999985 6654 2 2333334432 3456666676 999999754
Q ss_pred CCCCCceEEEEEec
Q 014163 412 MSYPWSTKLRVISH 425 (429)
Q Consensus 412 ~~~~~~~~lRi~~~ 425 (429)
....++||+++
T Consensus 304 ---~~~~~lRisi~ 314 (339)
T PRK06959 304 ---APPPSVRFGLP 314 (339)
T ss_pred ---CCCCeEEEECC
Confidence 12236999994
No 252
>PRK05939 hypothetical protein; Provisional
Probab=99.75 E-value=4.2e-16 Score=152.39 Aligned_cols=246 Identities=17% Similarity=0.024 Sum_probs=165.2
Q ss_pred cChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchH--
Q 014163 89 EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC-- 166 (429)
Q Consensus 89 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s-- 166 (429)
..|....+|++ ++++.|.+. .+.+++|+.|+..++.++.. .+++|++++..|.+
T Consensus 45 g~p~~~~lE~~----la~leg~~~-------~v~~ssG~~Ai~~~l~all~-------------~Gd~Vv~~~~~y~~t~ 100 (397)
T PRK05939 45 GTPTTAALEAK----ITKMEGGVG-------TVCFATGMAAIAAVFLTLLR-------------AGDHLVSSQFLFGNTN 100 (397)
T ss_pred CCHHHHHHHHH----HHHHhCCCe-------EEEeCCHHHHHHHHHHHHcC-------------CCCEEEECCCccccHH
Confidence 34666677765 888888864 56677779999888877643 23689999887753
Q ss_pred -HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeec
Q 014163 167 -WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (429)
Q Consensus 167 -~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~ 245 (429)
+...++..|++++.++. .|+++++++++++|++|++++++||+|.+.|+++|+++|+++ |+++++|+
T Consensus 101 ~~~~~l~~~G~~v~~v~~------~d~e~l~~~l~~~tklV~vesp~NptG~v~dl~~I~~la~~~------gi~livD~ 168 (397)
T PRK05939 101 SLFGTLRGLGVEVTMVDA------TDVQNVAAAIRPNTRMVFVETIANPGTQVADLAGIGALCRER------GLLYVVDN 168 (397)
T ss_pred HHHHHHHhcCCEEEEECC------CCHHHHHHhCCCCCeEEEEECCCCCCCCHHhHHHHHHHHHHc------CCEEEEEC
Confidence 33456778999988875 378999999999999999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCCccccCCCCeeEEEEcCcccCCCCC-CeEEEEEeCCCC-cccccccccCCCCCCCCCc---------
Q 014163 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYA-GVGWVVWRTKDD-LPDELVFHINYLGSDQPTF--------- 314 (429)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~-g~g~l~~~~~~~-~~~~~~~~~~~~~~~~~~~--------- 314 (429)
+|+.+.. ..+ ...++|.+..|.+|+++++. .+|++++.+... ..........|.......+
T Consensus 169 t~a~~~~--~~~------~~~gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (397)
T PRK05939 169 TMTSPWL--FRP------KDVGASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKG 240 (397)
T ss_pred Ccccccc--cCc------cccCCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHH
Confidence 9975321 111 11269999999999988643 346655532210 0000000000000000000
Q ss_pred -eeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC----------------CceEEE
Q 014163 315 -TLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV----------------GVPLVA 377 (429)
Q Consensus 315 -~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----------------~~~~v~ 377 (429)
...|.. ......|..+ .|.+.+..++++..+++..+.+.|++.|.++-+.-|. ..++++
T Consensus 241 ~~~~G~~--~~p~~a~l~~--rgl~tl~~R~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~s 316 (397)
T PRK05939 241 LRDMGAT--LSSEAAHRIA--IGAETLALRVDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLLS 316 (397)
T ss_pred HHhcCCC--CCHHHHHHHH--cCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEEE
Confidence 000111 1223334333 4557788899999999999999999999775333221 246899
Q ss_pred EEecC
Q 014163 378 FSLKD 382 (429)
Q Consensus 378 f~~~~ 382 (429)
|.+++
T Consensus 317 f~~~~ 321 (397)
T PRK05939 317 FELAD 321 (397)
T ss_pred EEeCC
Confidence 99864
No 253
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.75 E-value=3.4e-16 Score=144.74 Aligned_cols=299 Identities=14% Similarity=0.077 Sum_probs=205.7
Q ss_pred CccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchH
Q 014163 87 MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC 166 (429)
Q Consensus 87 ~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s 166 (429)
+.-+.+...+.+++.+.|.+.-|-+..++. ...++|.|+|.||...+..+.++ ++..++|.|.++.
T Consensus 117 fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP-~~~Vv~~G~T~ane~l~fcLadp-------------gdafLvPtPyY~g 182 (471)
T KOG0256|consen 117 FQDYHGLPSFRQAVAEFMERARGNRVKFDP-ERVVVTNGATSANETLMFCLADP-------------GDAFLVPTPYYPG 182 (471)
T ss_pred cccccCchHHHHHHHHHHHHHhCCCCccCc-cceEEecccchhhHHHHHHhcCC-------------CceeeecCCCCCc
Confidence 345678899999999999998887765432 23889999999998877777662 3578999999999
Q ss_pred HHHHHHh-cCceeEEEecc-CCccccCHHHHHHHhhh------CCeEEEEeeCCCccccccC---hHHHHHHHHHhhhcc
Q 014163 167 WEKFARY-FEVELKEVKLE-EGYYVMNPVKAVELVDE------NTICVAAILGSTLTGEFED---VKLLHDLLTKKNEET 235 (429)
Q Consensus 167 ~~~~~~~-~G~~v~~v~~~-~~~~~~d~~~l~~~i~~------~~~~v~~~~~~~~tG~~~~---l~~I~~la~~~~~~~ 235 (429)
+..-+++ .|++++.|.++ .++++++.++||+++.+ +.+.|+++.|+||.|++-+ +..+..+|.++
T Consensus 183 fdrdl~~rTgveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~k---- 258 (471)
T KOG0256|consen 183 FDRDLRWRTGVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRK---- 258 (471)
T ss_pred ccccceeccCceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhc----
Confidence 8876665 58888888886 45689999999998875 4588999999999999854 56667778899
Q ss_pred CCCccEEeecccccccccccCCCC--------ccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCC
Q 014163 236 GWDTPIHVDAASGGFIAPFLYPDL--------EWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYL 307 (429)
Q Consensus 236 ~~~~~l~vD~a~~~~~~~~~~~~~--------~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~ 307 (429)
++.+++|+.|++-+. ...+. ..++....+..+..-++-++.++.+.|+++..++... .+.... .+.
T Consensus 259 --niHvI~DEIya~sVF--~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~Vv-saA~km-ssf 332 (471)
T KOG0256|consen 259 --NIHVISDEIYAGSVF--DKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVV-SAATKM-SSF 332 (471)
T ss_pred --ceEEEeehhhccccc--CccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHH-HHHHHH-hhc
Confidence 999999999987432 22211 1111233566666667778899999999998775443 211111 111
Q ss_pred CCCCCCceeccCCchhHHHHHHHHH-----HHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecC
Q 014163 308 GSDQPTFTLNFSKGSSQIIAQYYQF-----IRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKD 382 (429)
Q Consensus 308 ~~~~~~~~~~~tr~~~~~~~~~~al-----~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~ 382 (429)
+. .+..-|+... +.+.+..+++..+|....-+++.+.|++++ +..+.. ..+++||---.
T Consensus 333 ~~-------------vSs~tQ~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~lg-I~cl~s--~AGlF~wvDlr 396 (471)
T KOG0256|consen 333 GL-------------VSSQTQYLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKALG-IPCLKS--NAGLFCWVDLR 396 (471)
T ss_pred cC-------------CcHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhcC-Cceeec--CCeeEEEEEhH
Confidence 11 1112233222 333445567777888889999999999987 877744 57888885321
Q ss_pred C--CCCCHHHHHHHHHHHHhcc-CceecccCCCCCCCceEEEEEecc
Q 014163 383 S--SAHTVFEISEGLRKKLNRF-QVVYPQKLPMSYPWSTKLRVISHL 426 (429)
Q Consensus 383 ~--~~~~~~~~~~~L~~~l~~~-G~~~~~~~~~~~~~~~~lRi~~~~ 426 (429)
. ...+ .+--..|.+++..+ ++.+++.++..+...+.+|+|+.+
T Consensus 397 ~lL~s~t-fe~El~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcFAn 442 (471)
T KOG0256|consen 397 KLLTSLT-FEGELELWERILDNVKLNLSPGSSCHCHEPGWFRVCFAN 442 (471)
T ss_pred HhcCcCC-hHHHHHHHHHHHHhhccccCCCCcceecCCCeEEEEecc
Confidence 1 0011 11122355555566 888877655567778899999975
No 254
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.75 E-value=1.2e-16 Score=154.86 Aligned_cols=230 Identities=15% Similarity=0.058 Sum_probs=162.8
Q ss_pred HHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHH----HHH
Q 014163 97 QNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK----FAR 172 (429)
Q Consensus 97 e~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~----~~~ 172 (429)
.+.+.+.++.+-|.+. .+++++|++|+..++.++.+ .+++|+++++.|.++.. .++
T Consensus 66 ~~~Le~~la~le~~~~-------~v~~sSG~aAi~~~l~all~-------------~GD~Vlv~~~~Y~~~~~l~~~~l~ 125 (395)
T PRK05967 66 TDALCKAIDALEGSAG-------TILVPSGLAAVTVPFLGFLS-------------PGDHALIVDSVYYPTRHFCDTMLK 125 (395)
T ss_pred HHHHHHHHHHHhCCCC-------EEEECcHHHHHHHHHHHhcC-------------CCCEEEEccCCcHHHHHHHHHHHH
Confidence 3345555777776543 67777799999988887754 23689999999988654 457
Q ss_pred hcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccc
Q 014163 173 YFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIA 252 (429)
Q Consensus 173 ~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~ 252 (429)
..|+++..++.+ +.+.++++++++|++|++++|+||++.+.|+++|+++|+++ |++++||++|+....
T Consensus 126 ~~Gi~v~~vd~~------~~e~l~~al~~~TklV~lesPsNP~l~v~dl~~I~~la~~~------g~~vvVD~t~a~p~~ 193 (395)
T PRK05967 126 RLGVEVEYYDPE------IGAGIAKLMRPNTKVVHTEAPGSNTFEMQDIPAIAEAAHRH------GAIVMMDNTWATPLY 193 (395)
T ss_pred hcCeEEEEeCCC------CHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHHHHHHHHh------CCEEEEECCccCcee
Confidence 789999888542 34779999999999999999999999999999999999999 999999999985332
Q ss_pred cccCCCCccccCCCCeeEEEEcCcccCCCCCC--eEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHH
Q 014163 253 PFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYY 330 (429)
Q Consensus 253 ~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~ 330 (429)
.. +.+ .++|.+..|..|++.+..+ .|++. .+++.. ..+....... |.- ......|.
T Consensus 194 --~~---pl~---~GaDivv~S~tKy~~Gh~d~~~G~v~-~~~~~~-~~l~~~~~~~----------G~~--~~p~da~l 251 (395)
T PRK05967 194 --FR---PLD---FGVDISIHAATKYPSGHSDILLGTVS-ANEKCW-PQLLEAHGTL----------GLC--AGPDDTYQ 251 (395)
T ss_pred --cC---hhH---cCCCEEEEecccccCCCCCeeEEEEE-cCHHHH-HHHHHHHHHc----------CCC--CCHHHHHH
Confidence 11 111 3799999999999766544 35443 333211 1111111101 111 23334554
Q ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeE-EeeCC---------------CCceEEEEEecC
Q 014163 331 QFIRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKD---------------VGVPLVAFSLKD 382 (429)
Q Consensus 331 al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~ 382 (429)
.+ .|.+.+..+++++.+++..+.+.|++.|.++ +..|. ...++++|.+++
T Consensus 252 ~~--rgl~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~ 317 (395)
T PRK05967 252 IL--RGLRTMGIRLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAA 317 (395)
T ss_pred HH--cCcccHHHHHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcC
Confidence 44 3556788899999999999999999999875 44332 024689999863
No 255
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.75 E-value=6.2e-16 Score=152.44 Aligned_cols=244 Identities=17% Similarity=0.118 Sum_probs=160.9
Q ss_pred hhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHH
Q 014163 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF 170 (429)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~ 170 (429)
|...+|| +.++++.|.+. .+++++|++|+..++.++.. .+++|+++.+.|......
T Consensus 58 pt~~~Le----~~lA~l~g~~~-------~l~~ssG~~Ai~~al~al~~-------------~Gd~Vl~~~~~Y~~t~~~ 113 (425)
T PRK06084 58 PTNDVLE----QRVAALEGGVG-------ALAVASGMAAITYAIQTIAE-------------AGDNIVSVAKLYGGTYNL 113 (425)
T ss_pred chHHHHH----HHHHHHhCCCc-------eeEehhHHHHHHHHHHHHhC-------------CCCEEEEeCCCcchHHHH
Confidence 4445555 45888888653 67888999999999888754 135788888877643332
Q ss_pred H----HhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecc
Q 014163 171 A----RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (429)
Q Consensus 171 ~----~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a 246 (429)
+ ...|+++.+++. .|++++++++++++++|++++++||+|.+.|+++|+++|+++ ++++++|++
T Consensus 114 ~~~~l~~~gi~v~~~d~------~d~e~le~ai~~~tklV~lesp~NPtG~v~dl~~I~~la~~~------~i~vVvD~a 181 (425)
T PRK06084 114 LAHTLPRIGIETRFAAH------DDIAALEALIDERTKAVFCESIGNPAGNIIDIQALADAAHRH------GVPLIVDNT 181 (425)
T ss_pred HHHhcccceeEEEEECC------CCHHHHHHHhccCCcEEEEeCCCCCCCeecCHHHHHHHHHHc------CCEEEEECC
Confidence 2 235666665542 489999999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCCccccCCCCeeEEEEcCcccCCCCC-CeEEEEEeCCCC-ccc---c---ccc-ccCCCCCC-CCCce-
Q 014163 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYA-GVGWVVWRTKDD-LPD---E---LVF-HINYLGSD-QPTFT- 315 (429)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~-g~g~l~~~~~~~-~~~---~---~~~-~~~~~~~~-~~~~~- 315 (429)
|+.+.. .. .. ..++|+++.|.+||+.++. ..|.+++.+... ... . +.. .+.|.+.. .....
T Consensus 182 ~a~~~~---~~--p~---~~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 253 (425)
T PRK06084 182 VATPVL---CR--PF---EHGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGP 253 (425)
T ss_pred Cccccc---CC--hh---hcCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcch
Confidence 985432 11 11 1269999999999987653 345555543211 000 0 000 01111100 00000
Q ss_pred -------------eccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC-----------
Q 014163 316 -------------LNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV----------- 371 (429)
Q Consensus 316 -------------~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----------- 371 (429)
..|.+ ......|..+ -+.+.+..++++..+++..+.+.|+++|.++-+..|.
T Consensus 254 ~~~~~~~~~~~~~~~g~~--l~~~~a~l~l--rgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~p~~~~~~ 329 (425)
T PRK06084 254 AAFIGRCRVVPLRNMGAA--LSPFNAFLIL--QGLETLALRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHELAR 329 (425)
T ss_pred HHHHHHHHHHHHHhcCCC--CCHHHHHHHH--cCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCcccHHHHH
Confidence 00111 1223344333 3556689999999999999999999999876443320
Q ss_pred ------CceEEEEEecC
Q 014163 372 ------GVPLVAFSLKD 382 (429)
Q Consensus 372 ------~~~~v~f~~~~ 382 (429)
..++++|.+++
T Consensus 330 ~~~~g~~gg~~s~~~~~ 346 (425)
T PRK06084 330 RYMGGKPASILSFGIKG 346 (425)
T ss_pred HhCCCCcceEEEEEecC
Confidence 14589999864
No 256
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.74 E-value=1.5e-16 Score=154.84 Aligned_cols=226 Identities=17% Similarity=0.084 Sum_probs=157.1
Q ss_pred HHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchH-HH---HHHHhc
Q 014163 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC-WE---KFARYF 174 (429)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s-~~---~~~~~~ 174 (429)
++.+.++++.|.+. .+++++|+.++..++ .+.. .+++|+++.+.|.+ +. ..+...
T Consensus 54 ~Le~~lA~l~g~~~-------~~~~~sG~aai~~~~-~~l~-------------~Gd~Viv~~~~y~~~~~~~~~~~~~~ 112 (377)
T PRK07671 54 ALEELIAVLEGGHA-------GFAFGSGMAAITAVM-MLFS-------------SGDHVILTDDVYGGTYRVMTKVLNRF 112 (377)
T ss_pred HHHHHHHHHhCCCc-------eEEeCCHHHHHHHHH-HHhC-------------CCCEEEECCCccchHHHHHHHHHhcC
Confidence 44455899999864 556666777765443 3322 13689999998873 33 344557
Q ss_pred CceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccc
Q 014163 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (429)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (429)
|++++.++. .|+++++++++++|++|++++|+||+|.+.|+++|+++|+++ |+++++|++|+...
T Consensus 113 G~~v~~v~~------~d~~~l~~ai~~~tklV~le~P~NPtg~~~dl~~I~~la~~~------g~~lvvD~a~~~~~--- 177 (377)
T PRK07671 113 GIEHTFVDT------SNLEEVEEAIRPNTKAIYVETPTNPLLKITDIKKISTIAKEK------GLLTIVDNTFMTPY--- 177 (377)
T ss_pred CeEEEEECC------CCHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHHc------CCEEEEECCCCccc---
Confidence 888888863 378999999999999999999999999999999999999999 99999999997532
Q ss_pred cCCCCccccCCCCeeEEEEcCcccCCCCCC--eEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHH
Q 014163 255 LYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (429)
Q Consensus 255 ~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al 332 (429)
... ... .++|+++.|.+||+++|.+ .|++++++++ +...+.....+.+. . ......|..+
T Consensus 178 ~~~--p~~---~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~-l~~~~~~~~~~~g~---------~---~~~~~a~l~~ 239 (377)
T PRK07671 178 WQS--PIS---LGADIVLHSATKYLGGHSDVVAGLVVVNSPE-LAEDLHFVQNSTGG---------I---LGPQDSWLLL 239 (377)
T ss_pred cCC--hhh---hCCeEEEecCcccccCCccceeEEEEeCcHH-HHHHHHHHHHhhcC---------C---CCHHHHHHHH
Confidence 111 111 2689999999999988764 4666655443 22222221222211 1 2233455555
Q ss_pred HHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC----------------CceEEEEEe
Q 014163 333 IRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV----------------GVPLVAFSL 380 (429)
Q Consensus 333 ~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----------------~~~~v~f~~ 380 (429)
+. ...+..++++..+++.++.++|++.|++.-+..|. ..++++|.+
T Consensus 240 ~~--l~tl~~R~~~~~~na~~la~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~ 301 (377)
T PRK07671 240 RG--LKTLGIRMEEHETNSRAIAEFLNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDV 301 (377)
T ss_pred cC--cChHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEe
Confidence 43 34467788999999999999999999875444331 246899988
No 257
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.74 E-value=4.3e-16 Score=153.96 Aligned_cols=242 Identities=13% Similarity=0.104 Sum_probs=165.7
Q ss_pred hhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchH----
Q 014163 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC---- 166 (429)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s---- 166 (429)
|....+| +.++++.|.+. ...+++|+.|+.+++.++.. .+++|+++...|.+
T Consensus 63 p~~~~le----~~lA~l~g~~~-------al~~~SG~~Ai~~al~all~-------------pGd~VIv~~~~y~~t~~~ 118 (427)
T PRK05994 63 PTNAVLE----ERVAALEGGTA-------ALAVASGHAAQFLVFHTLLQ-------------PGDEFIAARKLYGGSINQ 118 (427)
T ss_pred ccHHHHH----HHHHHHhCCCc-------EEEEcCHHHHHHHHHHHHhC-------------CCCEEEEecCcchhHHHH
Confidence 4445555 45889999864 78889999999988888754 23689999988875
Q ss_pred HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecc
Q 014163 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (429)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a 246 (429)
+...+...|++++.++. .|+++++++++++|++|++++++||+|.+.|+++|+++|+++ ++++++|++
T Consensus 119 ~~~~~~~~G~~v~~vd~------~d~~~l~~ai~~~tklV~vesp~NptG~v~dl~~I~~la~~~------gi~livD~a 186 (427)
T PRK05994 119 FGHAFKSFGWQVRWADA------DDPASFERAITPRTKAIFIESIANPGGTVTDIAAIAEVAHRA------GLPLIVDNT 186 (427)
T ss_pred HHHHHHhcCcEEEEECC------CCHHHHHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHc------CCEEEEECC
Confidence 33446778999888864 278999999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCCccccCCCCeeEEEEcCcccCCCCCC-eEEEEEeCCC-CcccccccccCCCCCCCCC-----------
Q 014163 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG-VGWVVWRTKD-DLPDELVFHINYLGSDQPT----------- 313 (429)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g-~g~l~~~~~~-~~~~~~~~~~~~~~~~~~~----------- 313 (429)
++.+. ... +.+ .++|.++.|.|||++++.+ +|.+++.... .+... . ...++......
T Consensus 187 ~a~~~---~~~--pl~---~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~-k-~~~~~~~~~~~~~~~~~~~~~~ 256 (427)
T PRK05994 187 LASPY---LIR--PIE---HGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKS-G-KYPMLSEPRPEYHGLVLHETFG 256 (427)
T ss_pred ccccc---cCC--ccc---cCCcEEEEcCccccCCCCCcEEEEEEeCCccccccc-c-ccccccCCcchhhhhhHHHHhh
Confidence 97532 211 111 3699999999999987665 4555553221 11000 0 00000000000
Q ss_pred ------------ceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC----------
Q 014163 314 ------------FTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV---------- 371 (429)
Q Consensus 314 ------------~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~---------- 371 (429)
....|.. ......|..+ -+.+.+..++++..+++.++.+.|+++|.++-+..|.
T Consensus 257 ~~~~~~~~~~~~~~~~G~~--~~~~~A~l~~--~~l~tL~~r~~~~~~~a~~la~~L~~~p~v~~v~yP~l~~~~~~~~~ 332 (427)
T PRK05994 257 NFAFAIAARVLGLRDLGPA--ISPFNAFLIL--TGIETLPLRMQRHSDNALAVAEWLKGHPKVSWVNYAGLPDDPYHALA 332 (427)
T ss_pred hhhhHHHHHHHHHHhcCCC--CCHHHHHHHH--cCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHH
Confidence 0000111 1222333333 3556688999999999999999999999875443221
Q ss_pred -------CceEEEEEecC
Q 014163 372 -------GVPLVAFSLKD 382 (429)
Q Consensus 372 -------~~~~v~f~~~~ 382 (429)
..++++|.+++
T Consensus 333 ~~~~~~g~g~~~sf~l~~ 350 (427)
T PRK05994 333 QKYSPKGAGAVFTFGLKG 350 (427)
T ss_pred HHhcCCCceEEEEEEecC
Confidence 24589999864
No 258
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.74 E-value=1.6e-15 Score=149.68 Aligned_cols=300 Identities=14% Similarity=0.031 Sum_probs=177.8
Q ss_pred ChHHHHHHHHHHcCcCCCCC--ccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHH
Q 014163 68 MEPECDKLVMASINKNYVDM--DEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (429)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~ 145 (429)
..|.+.+++.+.+++..... ...+... ++.+.+++++|.+. ..++++|++|+..++++++.....
T Consensus 58 ~~~~i~~a~~~~~~~~~~~~~~~~~~~~~----~l~~~l~~~~~~~~-------~~~~~SGs~A~e~al~~a~~~~~~-- 124 (401)
T PRK00854 58 CHPKILAAMVEQAGRLTLTSRAFRNDQLA----PLYEELAALTGSHK-------VLPMNSGAEAVETAIKAVRKWGYE-- 124 (401)
T ss_pred CCHHHHHHHHHHHhhccccccccCCHHHH----HHHHHHHhhCCCCE-------EEEeCCcHHHHHHHHHHHHHHHHh--
Confidence 46888888887776532211 1223333 44455778887643 889999999999999998753210
Q ss_pred HhcCCCCCCcEEEEcC-CCchHHHHHHHhcCc-------------eeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeC
Q 014163 146 KEQGKPYDKPNIVTGA-NVQVCWEKFARYFEV-------------ELKEVKLEEGYYVMNPVKAVELVDENTICVAAILG 211 (429)
Q Consensus 146 ~~~g~~~~~~~vi~~~-~~h~s~~~~~~~~G~-------------~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~ 211 (429)
..|.+.++++|++.. ..|.+...+.. .+. ++..+| ..|+++|++++.+++++|++.++
T Consensus 125 -~~g~~~~~~~vi~~~~~~HG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------~~d~~~le~~i~~~~~aii~e~~ 196 (401)
T PRK00854 125 -VKGVPEGQAEIIVCADNFHGRTLSIVG-FSTDPDARGGFGPFTPGFRVVP------FGDAEALEAAITPNTVAFLVEPI 196 (401)
T ss_pred -ccCCCCCCceEEEECCCcCCccHHHHh-ccCCccccccCCCCCCCeEEeC------CCCHHHHHHHhCCCeEEEEEccc
Confidence 112222334565554 45554333221 111 122221 14899999999989999999999
Q ss_pred CCccccccC----hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccc-cCCCCeeEEEEcCcccCCCC-CCe
Q 014163 212 STLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPLVKSINVSGHKYGLVY-AGV 285 (429)
Q Consensus 212 ~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~~~~~d~~~~s~hK~~~~p-~g~ 285 (429)
.+++|.+.| +++|.++|++| |+++++|++|.++.. .......+ .+. ..|.++++ |++.++ +.+
T Consensus 197 ~~~~G~~~~~~~~l~~l~~l~~~~------gi~lI~DEv~~g~g~--~g~~~~~~~~g~-~~D~~~~~--K~l~gg~~~i 265 (401)
T PRK00854 197 QGEAGVIIPPAGYFTRVRELCTAN------NVTLILDEIQTGLGR--TGKLLAEEHEGI-EADVTLIG--KALSGGFYPV 265 (401)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEechhhCCCC--CchHhHHhhcCC-CCCEEEec--ccccCCccCe
Confidence 999999876 99999999999 999999999975321 11000011 111 25666654 877666 468
Q ss_pred EEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeE
Q 014163 286 GWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFE 365 (429)
Q Consensus 286 g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~ 365 (429)
|+++.+++ .. +.+.. . . ...++ +. +.....+..++|+.+.. ....++.+++++++.+.|++++ ..
T Consensus 266 g~v~~~~~-~~-~~l~~---~-~---~~~t~-~~-~~~~~aa~~a~L~~l~~---~~~~~~~~~~~~~l~~~L~~~~-~~ 330 (401)
T PRK00854 266 SAVLSNSE-VL-GVLKP---G-Q---HGSTF-GG-NPLACAVARAALKVLTE---EGMIENAAEMGAYFLEGLRSIR-SN 330 (401)
T ss_pred EEEEEcHH-HH-hcccC---C-C---CCCCC-Cc-CHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHhhc-cC
Confidence 88876542 22 22110 0 0 00111 11 11233344445544432 3356778889999999998875 22
Q ss_pred EeeC-CCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEec
Q 014163 366 ILSK-DVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 366 ~~~~-~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
.+.. .....++.|.+.+. ..+..++.+.|. ++|+.+.. .+...+|++.+
T Consensus 331 ~~~~~~g~g~~~~i~~~~~-~~~~~~~~~~L~----~~GV~v~~------~~~~~lR~~p~ 380 (401)
T PRK00854 331 IVREVRGRGLMLAVELEPE-AGGARQYCEALK----ERGLLAKD------THDHTIRLAPP 380 (401)
T ss_pred ceEEEeccceEEEEEEecC-chhHHHHHHHHH----HCCeEEec------CCCCEEEEeCC
Confidence 2211 11345566655432 234566677776 89998753 12356999964
No 259
>PRK07505 hypothetical protein; Provisional
Probab=99.74 E-value=9.9e-16 Score=151.16 Aligned_cols=324 Identities=14% Similarity=0.066 Sum_probs=181.1
Q ss_pred CCCCCccccccccC--CChHHHHHHHHHHcCcCC-CCCccC--hhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCch
Q 014163 53 DGNPRLNLASFVTT--WMEPECDKLVMASINKNY-VDMDEY--PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS 127 (429)
Q Consensus 53 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t 127 (429)
+++..+++.+...- ..+|.+.+++.+.++.-. .++..+ ....+...++.+.+++++|. . .++.++|+
T Consensus 44 ~g~~~ld~~s~~~lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~~~-~-------~~~~~sG~ 115 (402)
T PRK07505 44 DGHTFVNFVSCSYLGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELFGA-S-------VLTFTSCS 115 (402)
T ss_pred CCceEEEeecCCccCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHhCC-C-------EEEECChH
Confidence 45555555443222 346888888887776421 111111 23455666888889999987 3 55666778
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHH--HHhcCceeEEEeccCCccccCHHHHHHHhhhCCeE
Q 014163 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF--ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTIC 205 (429)
Q Consensus 128 ~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~--~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~ 205 (429)
+|+..++..+...... +| ....|+.....|.++... ....+.+++.+|. .|+++|++++++++++
T Consensus 116 ~a~~~ai~~~~~~~~~----~~---~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~------~d~~~l~~~~~~~~~~ 182 (402)
T PRK07505 116 AAHLGILPLLASGHLT----GG---VPPHMVFDKNAHASLNILKGICADETEVETIDH------NDLDALEDICKTNKTV 182 (402)
T ss_pred HHHHHHHHHHHhcccC----CC---CCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC------CCHHHHHHHHhcCCCE
Confidence 8998888765431100 01 112445566788876432 2223556666653 3789999999888889
Q ss_pred EEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCc-cccC--CCCeeEEEEcCcccCCCC
Q 014163 206 VAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDFR--LPLVKSINVSGHKYGLVY 282 (429)
Q Consensus 206 v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~--~~~~d~~~~s~hK~~~~p 282 (429)
++++.|+|++|.+.++++|.++|+++ ++++++|++|+.+...-...... ..++ ......++.+.-|.+..+
T Consensus 183 ~vl~~p~~~~G~~~~~~~i~~l~~~~------~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~ 256 (402)
T PRK07505 183 AYVADGVYSMGGIAPVKELLRLQEKY------GLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS 256 (402)
T ss_pred EEEEecccccCCcCCHHHHHHHHHHc------CCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc
Confidence 99999999999999999999999999 99999999985311100010000 0112 123455556777866443
Q ss_pred CCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCC
Q 014163 283 AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTG 362 (429)
Q Consensus 283 ~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~ 362 (429)
| |++++.+++.. +.+... ...+++.++.+.....+..++++.+..+.+.+..++..++.+.+.+.+...
T Consensus 257 -G-g~~~~~~~~~~-~~~~~~-------~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~- 325 (402)
T PRK07505 257 -G-GVIMLGDAEQI-ELILRY-------AGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE- 325 (402)
T ss_pred -C-eEEEeCCHHHH-HHHHHh-------CCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc-
Confidence 3 66554343222 222110 111222244443445555566655555555555555555544443332211
Q ss_pred CeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceeccc-CCCCCCCceEEEEEec
Q 014163 363 RFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK-LPMSYPWSTKLRVISH 425 (429)
Q Consensus 363 ~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~-~~~~~~~~~~lRi~~~ 425 (429)
. ......+..+.+.+ .....++.+.|. ++|+.++.. +|....+...+|++++
T Consensus 326 ----~-~g~~~~i~~~~~~~--~~~~~~~~~~l~----~~Gi~v~~~~~p~~~~~~~~lRi~~~ 378 (402)
T PRK07505 326 ----Q-SGSFLPIRLIYIGD--EDTAIKAAKQLL----DRGFYTSPVFFPVVAKGRAGLRIMFR 378 (402)
T ss_pred ----C-CCCCCCEEEEEeCC--HHHHHHHHHHHH----HCCCeEeeecCCCCCCCCceEEEecC
Confidence 1 11123333333221 112345555555 999998765 3322234467999997
No 260
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.74 E-value=8e-16 Score=152.60 Aligned_cols=325 Identities=14% Similarity=0.023 Sum_probs=188.2
Q ss_pred CCCCCcccccccc---C-CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchH
Q 014163 53 DGNPRLNLASFVT---T-WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (429)
Q Consensus 53 ~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~ 128 (429)
+|+..+++.++.. - ..+|.+.+++.+.+..... +.......++..++.+.+++++|.+. ....+++||++
T Consensus 34 dG~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~~~~~~-----~~v~~~~sgse 107 (413)
T cd00610 34 DGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLAKLTH-FSLGFFYNEPAVELAELLLALTPEGL-----DKVFFVNSGTE 107 (413)
T ss_pred CCCEEEEcCccHHhhccCCCCHHHHHHHHHHHHhCcC-ccCcccCCHHHHHHHHHHHHhCCCCC-----CEEEEcCcHHH
Confidence 4555455444321 1 2567788888877754321 11111245666778888999998533 23889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCC-chHHHHHHHhcC------------ceeEEEeccCC-----cccc
Q 014163 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANV-QVCWEKFARYFE------------VELKEVKLEEG-----YYVM 190 (429)
Q Consensus 129 a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~-h~s~~~~~~~~G------------~~v~~v~~~~~-----~~~~ 190 (429)
|+..+++.++.. . +++.|++.++. |.+........+ .++..+|.++. .+..
T Consensus 108 a~~~al~~~~~~-~----------~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (413)
T cd00610 108 AVEAALKLARAY-T----------GRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELAD 176 (413)
T ss_pred HHHHHHHHHHHH-c----------CCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHH
Confidence 999999988642 1 12467666654 444333333222 23556665421 1455
Q ss_pred CHHHHHHHhhh---CCeEEEEeeCCCccccccC----hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcccc
Q 014163 191 NPVKAVELVDE---NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF 263 (429)
Q Consensus 191 d~~~l~~~i~~---~~~~v~~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~ 263 (429)
|+++|++.+++ ++.+|++....+++|.+.+ +++|.++|++| ++++++|++|+++.- .......+.
T Consensus 177 d~~~l~~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~------~~~li~Dev~~g~g~--~g~~~~~~~ 248 (413)
T cd00610 177 DLEALEEALEEHPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKH------GILLIADEVQTGFGR--TGKMFAFEH 248 (413)
T ss_pred HHHHHHHHHhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--CcchhhHhh
Confidence 99999999986 4566666666667798877 99999999999 999999999986311 111001111
Q ss_pred CCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHH
Q 014163 264 RLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNI 343 (429)
Q Consensus 264 ~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~ 343 (429)
.-...|.++++ |++.++.++|+++.++ +.. +.+. ...+.. ..+ .+.+.....++.++++.+.. .+.
T Consensus 249 ~~~~~d~~t~s--K~l~~g~~~g~~~~~~-~~~-~~~~-~~~~~~----~~t--~~~~~~~~~a~~a~l~~l~~---~~~ 314 (413)
T cd00610 249 FGVEPDIVTLG--KGLGGGLPLGAVLGRE-EIM-DAFP-AGPGLH----GGT--FGGNPLACAAALAVLEVLEE---EGL 314 (413)
T ss_pred cCCCCCeEEEc--ccccCccccEEEEEcH-HHH-Hhhc-cCCCCC----CCC--CCcCHHHHHHHHHHHHHHHh---ccH
Confidence 00134666554 8877778899987643 222 2210 000000 001 12222344455566665544 355
Q ss_pred HHHHHHHHHHHHHHHHhCCC-eEEee-CCCCceEEEEEecCCCC------CCHHHHHHHHHHHHhccCceecccCCCCCC
Q 014163 344 MENCMGNARALREGLEKTGR-FEILS-KDVGVPLVAFSLKDSSA------HTVFEISEGLRKKLNRFQVVYPQKLPMSYP 415 (429)
Q Consensus 344 ~~~~~~~~~~l~~~L~~~~~-~~~~~-~~~~~~~v~f~~~~~~~------~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~ 415 (429)
.++..++.+++.+.|+++.. ..++. ......++.+.+.+... .....+.+.|. ++|+.+.+..
T Consensus 315 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~gv~v~~~~----- 385 (413)
T cd00610 315 LENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAAL----ERGLLLRPSG----- 385 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHH----HCCeEEeecC-----
Confidence 67778888888888876531 11211 11245677777753210 23344445554 9999876421
Q ss_pred CceEEEEEecc
Q 014163 416 WSTKLRVISHL 426 (429)
Q Consensus 416 ~~~~lRi~~~~ 426 (429)
...+|++++.
T Consensus 386 -~~~lR~~~~~ 395 (413)
T cd00610 386 -GNVIRLLPPL 395 (413)
T ss_pred -CCEEEEECCC
Confidence 3458997653
No 261
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.73 E-value=2.5e-16 Score=153.34 Aligned_cols=233 Identities=18% Similarity=0.108 Sum_probs=160.4
Q ss_pred ChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchH---
Q 014163 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC--- 166 (429)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s--- 166 (429)
.|....|| +.++++.|.+. .+++++|+.|+..++ .+.. .+++|+++++.|..
T Consensus 49 ~p~~~~Le----~~la~l~g~~~-------al~~~SG~~Al~~~l-~~l~-------------pGd~Vi~~~~~y~~t~~ 103 (380)
T PRK06176 49 NPTRFALE----ELIADLEGGVK-------GFAFASGLAGIHAVF-SLFQ-------------SGDHVLLGDDVYGGTFR 103 (380)
T ss_pred ChhHHHHH----HHHHHHhCCCC-------EEEECCHHHHHHHHH-HHcC-------------CCCEEEEcCCChhHHHH
Confidence 34555555 44899999764 567777788887544 3332 23689999887764
Q ss_pred -HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeec
Q 014163 167 -WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (429)
Q Consensus 167 -~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~ 245 (429)
+...+...|++++.++. .|+++++++++++|++|++.+|+||+|.+.|+++|+++|+++ ++++++|+
T Consensus 104 ~~~~~~~~~gi~v~~vd~------~d~e~l~~ai~~~t~lV~lesP~Nptg~~~di~~I~~la~~~------gi~vivD~ 171 (380)
T PRK06176 104 LFDKVLVKNGLSCTIIDT------SDLSQIKKAIKPNTKALYLETPSNPLLKITDLAQCASVAKDH------GLLTIVDN 171 (380)
T ss_pred HHHHHHHhcCeEEEEcCC------CCHHHHHHhcCcCceEEEEECCCCCCceecCHHHHHHHHHHc------CCEEEEEC
Confidence 34456677888887764 379999999999999999999999999999999999999999 99999999
Q ss_pred ccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCC--eEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchh
Q 014163 246 ASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSS 323 (429)
Q Consensus 246 a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~ 323 (429)
+|+.+. ... +. ..++|++++|++|++.+|.. .|+++.++++ +...+.......+. . .
T Consensus 172 t~a~~~---~~~--p~---~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~-~~~~~~~~~~~~G~---------~---~ 230 (380)
T PRK06176 172 TFATPY---YQN--PL---LLGADIVVHSGTKYLGGHSDVVAGLVTTNNEA-LAQEIAFFQNAIGG---------V---L 230 (380)
T ss_pred Cccccc---cCC--cc---ccCCCEEEecCceeccCCccceeeEEEecHHH-HHHHHHHHHHHhcC---------C---C
Confidence 998532 211 11 13699999999999987764 4655554433 22221111111111 0 1
Q ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC----------------CceEEEEEecC
Q 014163 324 QIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV----------------GVPLVAFSLKD 382 (429)
Q Consensus 324 ~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----------------~~~~v~f~~~~ 382 (429)
.....|..+ .+...+..++++..+++..+.+.|++.|.+.-+..|. ..++++|.+++
T Consensus 231 ~~~~~~l~~--~gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~ 303 (380)
T PRK06176 231 GPQDSWLLQ--RGIKTLGLRMEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKN 303 (380)
T ss_pred CHHHHHHHH--hccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECC
Confidence 122234333 2445677888888999999999999999876443321 24688999863
No 262
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.73 E-value=1.1e-14 Score=152.34 Aligned_cols=337 Identities=14% Similarity=0.113 Sum_probs=208.3
Q ss_pred CCCCCCCCHHHHHHHHHHhhccCCCC-CccccccccCCChHHHHHHHHHH---cCc-CCCCCccChhhHHHHHHHHHHHH
Q 014163 31 KMPDNSMPKEAAYQVINDELMLDGNP-RLNLASFVTTWMEPECDKLVMAS---INK-NYVDMDEYPVTTELQNRCVNMIA 105 (429)
Q Consensus 31 ~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~le~~~~~~la 105 (429)
.+|+ +.++.++++++.+...++..- .|.-.++.+...+|.+.+.+.+- +.. .+.+++.+++.-+.--+...+++
T Consensus 41 ~lp~-~~sE~e~~~~~~~la~~N~~~~~fig~G~y~~~~p~~i~r~v~~~p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~ 119 (939)
T TIGR00461 41 QLEA-PSKEYEALAHLKKIASKNHKFKSYIGMGYYGTILPPVIQRNLLENPGWYTAYTPYQPEISQGRLEALLNFQTVVS 119 (939)
T ss_pred CCCC-CCCHHHHHHHHHHHHhcCCCccccCCCCcCCCcCChHHHHHHHhCchhhhcCCCCChhhhhHHHHHHHHHHHHHH
Confidence 4554 458999999998887654332 23223333334445555343321 111 23334556788888889999999
Q ss_pred HhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHH----HHHHhcCceeEEE
Q 014163 106 HLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE----KFARYFEVELKEV 181 (429)
Q Consensus 106 ~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~----~~~~~~G~~v~~v 181 (429)
+|+|++.. ......++|.+....+++.+.. ++ ++.+|++++..|+... ..++..|++++.+
T Consensus 120 eLtGm~~a-----NaSl~d~atA~aEa~~~a~~~~-------~~---~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~ 184 (939)
T TIGR00461 120 DLTGLPVA-----NASLLDEGTAAAEAMALSFNVS-------KK---KANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVV 184 (939)
T ss_pred HHHCCChh-----hhhccchhhHHHHHHHHHHHhh-------cC---CCCEEEECCCCCcchHHHHHHHHHhcCcEEEEE
Confidence 99999862 2455666676655444443321 11 1358999999999754 3456789888877
Q ss_pred eccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc
Q 014163 182 KLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW 261 (429)
Q Consensus 182 ~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~ 261 (429)
+. ++|++.+ ++..+++.+| |..|.+.|+++|++++|++ |.++++++-...... +.+ +
T Consensus 185 ~~---------~~l~~~~--~~~~v~~q~P-n~~G~ied~~~i~~~~h~~------gal~~~~ad~~al~l--l~~--P- 241 (939)
T TIGR00461 185 DC---------SDIKKAV--DVFGCLLQYP-ATDGSILDYKQLIDALHSH------KSLVSVAADLMALTL--LTP--P- 241 (939)
T ss_pred cH---------HHHhhcC--CEEEEEEECC-CCCeEEecHHHHHHHHHHc------CCEEEEEechHHhCC--cCC--H-
Confidence 43 3466655 4666666666 5569999999999999999 999999654432111 111 1
Q ss_pred ccCCCCeeEEEEcCcccCC----CCCCeEEEEEeCCCCcccccccc-----cCCCCCCCCCcee----------ccCCch
Q 014163 262 DFRLPLVKSINVSGHKYGL----VYAGVGWVVWRTKDDLPDELVFH-----INYLGSDQPTFTL----------NFSKGS 322 (429)
Q Consensus 262 ~~~~~~~d~~~~s~hK~~~----~p~g~g~l~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~----------~~tr~~ 322 (429)
+..++|++..++|+|+. ++++.|++.+++. +.+.+.-. .+-.+...-.+++ .+|.+.
T Consensus 242 --ge~GaDi~vg~~q~fg~p~g~GGP~aG~~a~~~~--l~r~lPgrivG~s~D~~G~~~~~l~LqtReqhIrRekAtSNI 317 (939)
T TIGR00461 242 --GHYGADIVLGSSQRFGVPMGYGGPHAAFFAVKDE--YNRKMPGRIVGVSKDALGNTALRLALQTREQHIRRDKATSNI 317 (939)
T ss_pred --HHcCCcEEeeCCCccCCCCCCCCCceeeeeecHh--hHhhCCCCceeEEecCCCCccceeecccccccccccccCcch
Confidence 22379999777777754 2445789888763 22221110 0100000000000 022221
Q ss_pred hH---HHHHHHH--HHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHH
Q 014163 323 SQ---IIAQYYQ--FIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRK 397 (429)
Q Consensus 323 ~~---~~~~~~a--l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~ 397 (429)
.. .++..++ +.++|.+|++++.++...++.++.+.|++.+ ++++.++ .+..+.+++. ..+..++.++|.
T Consensus 318 Ct~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~G-~~~~~~~-fF~~~~v~~~---~~~~~~i~~~~~- 391 (939)
T TIGR00461 318 CTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLENDP-HELINKT-WFDTLTVKVG---NGISSELLKAAE- 391 (939)
T ss_pred hHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhCC-CcccCCC-ccceEEEEeC---CCCHHHHHHHHH-
Confidence 11 2233334 5778999999999999999999999999954 9988764 5777778763 134567777777
Q ss_pred HHhccCceecccCCCCCCCceEEEEEec
Q 014163 398 KLNRFQVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 398 ~l~~~G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
++||.++.. +...+++|++
T Consensus 392 ---~~gi~l~~~------~~~~i~~s~~ 410 (939)
T TIGR00461 392 ---EFNINLRAV------DTTTVGIALD 410 (939)
T ss_pred ---HCCCeeeec------CCCEEEEEee
Confidence 999987641 1235888875
No 263
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.73 E-value=9.6e-16 Score=151.38 Aligned_cols=236 Identities=17% Similarity=0.093 Sum_probs=162.2
Q ss_pred HHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchH----HHHHHHhc
Q 014163 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC----WEKFARYF 174 (429)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s----~~~~~~~~ 174 (429)
++.+.+++++|.+. .+++++|++|+..++.++.. .+++|+++.+.|.. +...++..
T Consensus 61 ~le~~lA~l~g~~~-------~v~~~sG~~Ai~~al~~l~~-------------~Gd~Vl~~~~~y~~t~~~~~~~~~~~ 120 (418)
T TIGR01326 61 VLEQRIAALEGGVA-------ALAVASGQAAITYAILNLAQ-------------AGDNIVSSSYLYGGTYNLFKHTLKRL 120 (418)
T ss_pred HHHHHHHHHhCCCe-------EEEEccHHHHHHHHHHHHhC-------------CCCEEEEECCCcHHHHHHHHHHHHHc
Confidence 44455899999753 78999999999988887754 13588888887753 45567778
Q ss_pred CceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccc
Q 014163 175 EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (429)
Q Consensus 175 G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (429)
|++++.++.+ |++++++++++++++|++.+++||+|.+.|+++|+++|+++ ++++++|++|+.+.
T Consensus 121 G~~v~~v~~~------d~~~l~~~l~~~t~~V~le~p~NPtg~v~dl~~I~~la~~~------~i~livD~t~~~~~--- 185 (418)
T TIGR01326 121 GIEVRFVDPD------DPEEFEKAIDENTKAVFAETIGNPAINVPDIEAIAEVAHAH------GVPLIVDNTFATPY--- 185 (418)
T ss_pred CcEEEEECCC------CHHHHHHhcCcCCeEEEEECCCCCCCeecCHHHHHHHHHHc------CCEEEEECCCchhh---
Confidence 9999888742 78999999999999999999999999999999999999999 99999999997532
Q ss_pred cCCCCccccCCCCeeEEEEcCcccCCC-CCCeEEEEEeCCCCcccccccccCCCCCCCCCce------------------
Q 014163 255 LYPDLEWDFRLPLVKSINVSGHKYGLV-YAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFT------------------ 315 (429)
Q Consensus 255 ~~~~~~~~~~~~~~d~~~~s~hK~~~~-p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 315 (429)
... . +. .++|+++.|.+|++++ +..+|++++...... ... ..+.........
T Consensus 186 ~~~--~--l~-~g~Divv~S~sK~l~g~G~~lGg~v~~~~~~~-~~~---~~~~~~~~~~~~q~a~~~~~~~~~~~~~~~ 256 (418)
T TIGR01326 186 LCR--P--ID-HGADIVVHSATKYIGGHGTAIGGVIVDGGKFD-WAN---GRFPLFTTPDPSYHGLVFTETFGNPAFIVK 256 (418)
T ss_pred cCC--c--hh-cCCeEEEECccccccCCccceEEEEEeccccc-ccc---cccccccCCCCccccchhhhhhchhhHHHH
Confidence 111 1 11 2589999999999876 455788887543211 100 000000000000
Q ss_pred -------eccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC-----------------
Q 014163 316 -------LNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV----------------- 371 (429)
Q Consensus 316 -------~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----------------- 371 (429)
..|.. ......|..+ .+...+..++++..+++..+.+.|.+.|++..+.-|.
T Consensus 257 ~~~~~~~~~G~~--~~p~~a~~~~--~~l~tl~~R~~~~~~~a~~la~~L~~~~~V~~V~yP~l~~~~~~~~~~~~~~~g 332 (418)
T TIGR01326 257 ARVQLLRDLGAA--LSPFNAFLLL--QGLETLSLRMERHVENALKVAEFLEAHPKVAWVNYPGLASHPHHALAKKYLPKG 332 (418)
T ss_pred HHHHHHHhcCCC--CCHHHHHHHH--CCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhccCC
Confidence 00111 0122333333 3445567777887888999999999999876544321
Q ss_pred CceEEEEEecC
Q 014163 372 GVPLVAFSLKD 382 (429)
Q Consensus 372 ~~~~v~f~~~~ 382 (429)
..++++|.+++
T Consensus 333 ~g~~~s~~l~~ 343 (418)
T TIGR01326 333 FGAVLSFEIKG 343 (418)
T ss_pred CcceEEEEecC
Confidence 13489999864
No 264
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.73 E-value=2e-15 Score=148.04 Aligned_cols=302 Identities=15% Similarity=0.034 Sum_probs=176.1
Q ss_pred ChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHh
Q 014163 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (429)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~ 147 (429)
.+|.+.+++.+++.+.......+ ..+...++.+++++++|.+. ..+++||++|+..++++++.... .
T Consensus 44 ~~p~v~~a~~~~~~~~~~~~~~~--~~~~~~~l~~~la~~~g~~~-------~~~~~sg~~a~~~a~~~~~~~~~-~--- 110 (379)
T TIGR00707 44 AHPKLVEALKEQLEKLVHVSNLY--YTEPQEELAEKLVEHSGADR-------VFFCNSGAEANEAALKLARKYTG-D--- 110 (379)
T ss_pred CCHHHHHHHHHHHhhcccccccc--CCHHHHHHHHHHHhhCCCCE-------EEEeCCcHHHHHHHHHHHHHHhh-c---
Confidence 34778888877776532211111 22345566677899998763 88999999999999987753210 0
Q ss_pred cCCCCCCcEEEEcCCCchHHHHHHHhcCceeE----EEeccCCcccc----CHHHHHHHhhhCCeEEEEeeCCCccccc-
Q 014163 148 QGKPYDKPNIVTGANVQVCWEKFARYFEVELK----EVKLEEGYYVM----NPVKAVELVDENTICVAAILGSTLTGEF- 218 (429)
Q Consensus 148 ~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~----~v~~~~~~~~~----d~~~l~~~i~~~~~~v~~~~~~~~tG~~- 218 (429)
.| ..+++|+++++++..+...+...+.... ..++..+ ... |+++|++.+++++++|+++.+++++|..
T Consensus 111 ~~--~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~l~~~~~~~~~~v~~~p~~~~~g~~~ 187 (379)
T TIGR00707 111 KG--KEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPG-FSYAPYNDIESLKKAIDDETAAVIVEPIQGEGGVNP 187 (379)
T ss_pred cC--CCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCC-ceeeCCCCHHHHHHHhhhCeeEEEEEccccCCCCcc
Confidence 00 0135788877776554444444443321 1222221 122 8999999999889999888776677754
Q ss_pred ---cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccc-cCCCCeeEEEEcCcccCCCCCCeEEEEEeCCC
Q 014163 219 ---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (429)
Q Consensus 219 ---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~ 294 (429)
+++++|.++|+++ ++++++|++|.++.. ........ .+ ...|.+++ .|.+.+++++|+++.++ +
T Consensus 188 ~~~~~l~~i~~l~~~~------~~~~i~De~~~~~~~--~g~~~~~~~~~-~~~d~~t~--sK~~~~G~riG~~~~~~-~ 255 (379)
T TIGR00707 188 ASAEFLKALREICKDK------DALLIFDEVQTGIGR--TGKFFAYEHYG-IEPDIITL--AKGLGGGVPIGATLAKE-E 255 (379)
T ss_pred CCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--cchhhhHHhcC-CCCCEEEE--cccccCCcccEEEEEcH-H
Confidence 2489999999999 999999999976321 11001111 11 12455543 57777888999988753 2
Q ss_pred CcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEe-eC-CCC
Q 014163 295 DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEIL-SK-DVG 372 (429)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~-~~~ 372 (429)
.. +.+... .. ... .+.+.....+..++++.+.. .+..++..++++++++.|+++. .... .. +..
T Consensus 256 ~~-~~~~~~--~~---~~~----~~~~~~~~~aa~aaL~~~~~---~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~ 321 (379)
T TIGR00707 256 VA-EAFTPG--DH---GST----FGGNPLACAAALAVLEVIEK---ERLLENVKEKGDYFKERLEELG-KNYPNKEVRGK 321 (379)
T ss_pred HH-hhhcCC--CC---CCC----CCCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHH-hhCCCCccccC
Confidence 22 221110 00 001 11122344455555555432 3456677778888888887653 2211 11 113
Q ss_pred ceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEec
Q 014163 373 VPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 373 ~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
..++.+.+.+ +..++.+.|. ++|+.+.+. +...+|++++
T Consensus 322 g~~~~~~~~~----~~~~~~~~l~----~~Gv~v~~~------~~~~lRi~~~ 360 (379)
T TIGR00707 322 GLMLGIELEA----PCKDIVKKAL----EKGLLVNCA------GPKVLRFLPP 360 (379)
T ss_pred ceEEEEEecC----cHHHHHHHHH----HCCcEEeeC------CCCEEEEECC
Confidence 4456666532 2456666666 999998642 2356999954
No 265
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.72 E-value=2.1e-15 Score=146.04 Aligned_cols=293 Identities=14% Similarity=0.103 Sum_probs=178.0
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
..+..+.+.+...+-..--.|..+|...+||++ +++++|.+. .+.|++||.|++++......
T Consensus 54 S~T~aMs~~q~a~~~vGDd~Yagd~s~~~LE~~----vAe~lG~e~-------aV~v~sGTaAl~ll~~l~v~------- 115 (460)
T PRK13237 54 SGTNAMSDRQWAGMMIGDEAYAGSRNFYHLEET----VQEYYGFKH-------VVPTHQGRGAENLLSRIAIK------- 115 (460)
T ss_pred CCchhccHHHHHHHhhcchhhcCCCcHHHHHHH----HHHHHCCCe-------EEEeCCHHHHHHHHHHhCCC-------
Confidence 334444554333332221236678888999877 788899975 88999999999875332211
Q ss_pred hcCCCCCCcEEEEcCCCchHHHHH-HHhcCceeEEEec---------cCCccccCHHHHHHHhhhC----CeEEEEeeCC
Q 014163 147 EQGKPYDKPNIVTGANVQVCWEKF-ARYFEVELKEVKL---------EEGYYVMNPVKAVELVDEN----TICVAAILGS 212 (429)
Q Consensus 147 ~~g~~~~~~~vi~~~~~h~s~~~~-~~~~G~~v~~v~~---------~~~~~~~d~~~l~~~i~~~----~~~v~~~~~~ 212 (429)
+ +++| +..+|++...+ ....|+...-+.. ++.+|.+|+++|+++|+++ +.+|.+...+
T Consensus 116 -p-----Gd~V--p~n~~f~Tt~ahI~~~Ga~fvDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itv 187 (460)
T PRK13237 116 -P-----GQYV--PGNMYFTTTRYHQELNGGIFVDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTV 187 (460)
T ss_pred -C-----cCEE--CCccchHhhHHHHHhCCcEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEec
Confidence 1 2333 77777766555 6777775433321 1345889999999999864 3456666777
Q ss_pred Ccc-ccc---cChHHHHHHHHHhhhccCCCccEEeecccccccccccC---CCC-cccc------CCCCeeEEEEcCccc
Q 014163 213 TLT-GEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY---PDL-EWDF------RLPLVKSINVSGHKY 278 (429)
Q Consensus 213 ~~t-G~~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~---~~~-~~~~------~~~~~d~~~~s~hK~ 278 (429)
|.. |.. +++++|.++|++| |++||.|+|+..+..-|.. +.. .... -...+|.+++|+||.
T Consensus 188 n~~GGqpvs~~~m~~I~elA~~~------Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~ 261 (460)
T PRK13237 188 NLAGGQPVSMANMRAVRELCDKH------GIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKD 261 (460)
T ss_pred ccCCCeeCCHHhHHHHHHHHHHc------CCEEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCC
Confidence 776 444 5789999999999 9999999999754221221 101 0011 124689999999999
Q ss_pred CCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH
Q 014163 279 GLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGL 358 (429)
Q Consensus 279 ~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L 358 (429)
+.++.| |+++++++++..+.-.....|.+ ..++ |..++-.+.++..++...-. ..++++..+..+||.++|
T Consensus 262 ~~~~~G-G~i~t~D~eL~~~~r~~~~~~eG--~~ty---gg~~grd~~alAvgl~E~~~---~~y~~~ri~~~~~l~~~L 332 (460)
T PRK13237 262 CLVNIG-GFLAMNDEELFDEAKELVVVYEG--MPSY---GGMAGRDMEAMAIGIEESVQ---YEYIEHRVGQVRYLGEKL 332 (460)
T ss_pred CCCCCc-eEEEECCHHHHHHHHHhccccCC--CcCC---CChhhhHHHHHHhHHHhhch---HHHHHHHHHHHHHHHHHH
Confidence 988775 67777776543222111122222 1121 22222234444444433222 266677778899999999
Q ss_pred HhCCCeEEeeCCCCceEEEEEec------CCCCCCHHHHHHHHHHHHhccCce
Q 014163 359 EKTGRFEILSKDVGVPLVAFSLK------DSSAHTVFEISEGLRKKLNRFQVV 405 (429)
Q Consensus 359 ~~~~~~~~~~~~~~~~~v~f~~~------~~~~~~~~~~~~~L~~~l~~~G~~ 405 (429)
.+.+ +.++.|. ..+-+.+... +........++..|.. +.||.
T Consensus 333 ~~~G-vpv~~p~-ggH~v~vda~~~lph~~~~~~p~~al~~~ly~---~~GiR 380 (460)
T PRK13237 333 LAAG-VPIVEPV-GGHAVFLDARRFLPHLPQDQFPAQALAAELYI---ESGVR 380 (460)
T ss_pred HHCC-CceecCC-CceEEEEEhHHhCCCCCcccChHHHHHHHHHH---HhCcC
Confidence 9987 8888764 3444444322 1223466777777773 44543
No 266
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.72 E-value=4.4e-15 Score=145.50 Aligned_cols=312 Identities=13% Similarity=0.025 Sum_probs=179.3
Q ss_pred ChHHHHHHHHHHcCcCCCC-------CccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHH
Q 014163 68 MEPECDKLVMASINKNYVD-------MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRK 140 (429)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~ 140 (429)
.+|.+.+++.+++.+...+ |....... ++.+.+++++|.+. ..+.++|+.++..++.++.+
T Consensus 13 ~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~----~LE~~lA~~~g~e~-------al~~~sG~~a~~~~i~~l~~- 80 (392)
T PLN03227 13 SSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHL----ELEQCMAEFLGTES-------AILYSDGASTTSSTVAAFAK- 80 (392)
T ss_pred CCHHHHHHHHHHHHHhCCCCcccccccCChHHHH----HHHHHHHHHhCCCc-------EEEecCcHHHHHHHHHHhCC-
Confidence 4577777777777652211 22233344 44455899999864 56666666777767766543
Q ss_pred HHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhh-----------hCCeEEEEe
Q 014163 141 WQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD-----------ENTICVAAI 209 (429)
Q Consensus 141 ~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~-----------~~~~~v~~~ 209 (429)
.+++|++++..|.++...+...+++++.++..+ .-|++.+.+.+. +++++|++.
T Consensus 81 ------------~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d---~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E 145 (392)
T PLN03227 81 ------------RGDLLVVDRGVNEALLVGVSLSRANVRWFRHND---MKDLRRVLEQVRAQDVALKRKPTDQRRFLVVE 145 (392)
T ss_pred ------------CCCEEEEeccccHHHHHHHHHcCCeEEEeCCCC---HHHHHHHHHHhhhhccccccccCCCcEEEEEc
Confidence 236899999999999888888888777776431 123444444443 257889999
Q ss_pred eCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCC-c-ccc-CCCCeeEEEEcCcccCCCCCCeE
Q 014163 210 LGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-E-WDF-RLPLVKSINVSGHKYGLVYAGVG 286 (429)
Q Consensus 210 ~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~-~~~-~~~~~d~~~~s~hK~~~~p~g~g 286 (429)
.+.+++|.+.|+++|.++|++| |+++++|++|+.+......... . +.+ ...++|.++.+.+|.++ |.| |
T Consensus 146 ~v~~~~G~i~~l~~i~~l~~~~------g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g-~~g-g 217 (392)
T PLN03227 146 GLYKNTGTLAPLKELVALKEEF------HYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFG-SVG-G 217 (392)
T ss_pred CCcCCCCcccCHHHHHHHHHHc------CCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhh-ccC-c
Confidence 9999999999999999999999 9999999999732221000000 0 011 12368999999999754 333 4
Q ss_pred EEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEE
Q 014163 287 WVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEI 366 (429)
Q Consensus 287 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~ 366 (429)
+++.+. +.. +.+.. + .. ..++.++.+.....+..+++..... .++..++..++.++|++.|++.+ +..
T Consensus 218 ~v~~~~-~~~-~~~~~---~-~~---~~~~~~~~~p~~~~aa~~al~~~~~--~~~~~~~l~~~~~~l~~~L~~~~-~~~ 285 (392)
T PLN03227 218 MTVGSE-EVV-DHQRL---S-GS---GYCFSASAPPFLAKADATATAGELA--GPQLLNRLHDSIANLYSTLTNSS-HPY 285 (392)
T ss_pred EEecCH-HHH-HHHHH---h-Cc---CccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhcC-Ccc
Confidence 554432 211 11110 1 00 1111122211122222223322211 35678888999999999998632 221
Q ss_pred eeC---------CCCceEEEEEecCCCC---CCHHHHHHHHHHHHhccCceeccc-C-C----CCCCCceEEEEEeccc
Q 014163 367 LSK---------DVGVPLVAFSLKDSSA---HTVFEISEGLRKKLNRFQVVYPQK-L-P----MSYPWSTKLRVISHLR 427 (429)
Q Consensus 367 ~~~---------~~~~~~v~f~~~~~~~---~~~~~~~~~L~~~l~~~G~~~~~~-~-~----~~~~~~~~lRi~~~~~ 427 (429)
+.+ ....+++.+.+.+... .+...+...+.+++.++|+.+... . + +..+ ...+|++++..
T Consensus 286 ~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~~~P-~~~iR~~~~~~ 363 (392)
T PLN03227 286 ALKLRNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQLVP-PPCLRVVANAS 363 (392)
T ss_pred ccccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccccCCcCCCCC-CceEEEEecCC
Confidence 111 1145678787743110 001112234444444999887532 1 1 1122 35689998753
No 267
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.72 E-value=2.7e-15 Score=148.00 Aligned_cols=301 Identities=13% Similarity=0.015 Sum_probs=174.7
Q ss_pred hHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhc
Q 014163 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (429)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~ 148 (429)
+|.+.+++.+.+.........++ .....++.+++++++|.+.. ....+++||++|+..+++.++..
T Consensus 61 ~p~v~~ai~~~~~~~~~~~~~~~--~~~~~~la~~l~~~~~~~~~----~~v~~~~sgsea~~~al~~~~~~-------- 126 (398)
T PRK03244 61 HPAVVEAVTRQLATLGHVSNLFA--TEPQIALAERLVELLGAPEG----GRVFFCNSGAEANEAAFKLARLT-------- 126 (398)
T ss_pred CHHHHHHHHHHHHhccCccCccC--CHHHHHHHHHHHHhCCCCCC----CEEEEeCchHHHHHHHHHHHHHH--------
Confidence 57788888877765321111121 11223666778888885411 13899999999999999988752
Q ss_pred CCCCCCcEEEEcCCC-chHHHHHHHhcCceeEEEec---cCC--cc-ccCHHHHHHHhhhCCeEEEEeeCCCccccccC-
Q 014163 149 GKPYDKPNIVTGANV-QVCWEKFARYFEVELKEVKL---EEG--YY-VMNPVKAVELVDENTICVAAILGSTLTGEFED- 220 (429)
Q Consensus 149 g~~~~~~~vi~~~~~-h~s~~~~~~~~G~~v~~v~~---~~~--~~-~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~- 220 (429)
| +..|+..+.+ |.....+....|......+. ..+ .. ..|++++++.+++++.+|++..+.+++|.+.|
T Consensus 127 g----~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aviiep~~~~~G~~~~~ 202 (398)
T PRK03244 127 G----RTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAVDDDTAAVFLEPIQGEAGVVPPP 202 (398)
T ss_pred C----CCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCCCHHHHHHhhcCCeEEEEEecccCCCCCcCCC
Confidence 1 2356555444 44433333333322111110 000 00 13789999999878889999999999999876
Q ss_pred ---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcc
Q 014163 221 ---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP 297 (429)
Q Consensus 221 ---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~ 297 (429)
+++|.++|++| |+++|+|++|.++.. ....+.....-...|.+++ .|++.++.++|+++.+++ +.
T Consensus 203 ~~~l~~l~~l~~~~------~~llI~DEv~~g~gr--~g~~~~~~~~~~~pDi~t~--sK~l~~G~~ig~~~~~~~--~~ 270 (398)
T PRK03244 203 AGYLAAAREITDRH------GALLVLDEVQTGIGR--TGAWFAHQHDGVTPDVVTL--AKGLGGGLPIGACLAFGP--AA 270 (398)
T ss_pred HHHHHHHHHHHHHc------CCEEEEeccccCCcc--cchHHhhhhhCCCCCEEEE--chhhhCCcccEEEEEcHH--HH
Confidence 89999999999 999999999976321 1110111111113566655 488888888999987643 22
Q ss_pred cccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeC-CCCceEE
Q 014163 298 DELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSK-DVGVPLV 376 (429)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~~~v 376 (429)
+.+.. .....++.+++ ....+..++++.+.. ++..++..++.++|.+.|++++ ...+.. .....++
T Consensus 271 ~~~~~-------~~~~~t~~~~~--~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~-~~~~~~v~g~g~~~ 337 (398)
T PRK03244 271 DLLTP-------GLHGSTFGGNP--VACAAALAVLDTIAS---EGLLENAERLGEQLRAGIEALG-HPLVDHVRGRGLLL 337 (398)
T ss_pred hhccC-------CCCcCCCCCCH--HHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhcC-CCceeeEeeccEEE
Confidence 22110 00011111122 233344444544433 2456777888899999999864 322211 1134566
Q ss_pred EEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEec
Q 014163 377 AFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 377 ~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
.+.++.. ...++.+.|. ++|+.+... +...||++.+
T Consensus 338 ~i~~~~~---~~~~~~~~l~----~~Gv~~~~~------~~~~iR~~p~ 373 (398)
T PRK03244 338 GIVLTAP---VAKAVEAAAR----EAGFLVNAV------APDVIRLAPP 373 (398)
T ss_pred EEEEecc---HHHHHHHHHH----HCCeEEeec------CCCEEEEECC
Confidence 6666321 2344555555 999987642 2356999954
No 268
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.71 E-value=3.1e-15 Score=146.41 Aligned_cols=310 Identities=15% Similarity=0.043 Sum_probs=193.7
Q ss_pred ChHHHHHHHHHHcCcCCCCCccCh---hhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHH--H
Q 014163 68 MEPECDKLVMASINKNYVDMDEYP---VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKW--Q 142 (429)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~--~ 142 (429)
.+|.+.+++.+++.+.+.+...++ +...+.+++.+.+++++|.+. ..+.++|-.||+.++.++.... .
T Consensus 117 ~~p~v~~a~~~ai~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~e~-------all~sSGy~AN~~~i~aL~~~~~~~ 189 (476)
T PLN02955 117 SHPTISNAAANAAKEYGMGPKGSALICGYTTYHRLLESSLADLKKKED-------CLVCPTGFAANMAAMVAIGSVASLL 189 (476)
T ss_pred CCHHHHHHHHHHHHHcCCCCCCcCccccChHHHHHHHHHHHHHHCCCc-------EEEECChHHHHHHHHHHHhhccccc
Confidence 468888888888876544333332 555555566677999999975 7788889999988877763110 0
Q ss_pred HHHHhcCCCCCCcEEEEcCCCchHHHHHHHhc----CceeEEEeccCCccccCHHHHHHHhhh---CCeEEEEeeCCCcc
Q 014163 143 QKRKEQGKPYDKPNIVTGANVQVCWEKFARYF----EVELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGSTLT 215 (429)
Q Consensus 143 ~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~----G~~v~~v~~~~~~~~~d~~~l~~~i~~---~~~~v~~~~~~~~t 215 (429)
....... ....+.|++....|.|+...+++. ++++..++ .-|+++|+++++. +.++|++...-+..
T Consensus 190 ~~~~~~~-~~~~d~i~~D~~~HaSI~dG~~ls~~~~~a~~~~f~------HND~~~Le~~L~~~~~~~~~Vv~EgV~Smd 262 (476)
T PLN02955 190 AASGKPL-KNEKVAIFSDALNHASIIDGVRLAERQGNVEVFVYR------HCDMYHLNSLLSSCKMKRKVVVTDSLFSMD 262 (476)
T ss_pred ccccccc-CCCCcEEEEeccchHHHHHHHHhccccCCceEEEeC------CCCHHHHHHHHHhCCCCceEEEEeCCCCCC
Confidence 0000000 012346778888999999998876 45554443 2478889988864 34555555556778
Q ss_pred ccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCC-CCeeEEEEcCcccCCCCCCeEEEEEeCCC
Q 014163 216 GEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRL-PLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (429)
Q Consensus 216 G~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~-~~~d~~~~s~hK~~~~p~g~g~l~~~~~~ 294 (429)
|.+.|+++|.++|++| +++++||+||+.+...-........+++ ...|+++.+.-|.+++. .|+++.++ +
T Consensus 263 GdiapL~eL~~L~~~~------ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~--GGfi~gs~-~ 333 (476)
T PLN02955 263 GDFAPMEELSQLRKKY------GFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCH--GGFIACSK-K 333 (476)
T ss_pred CCcCCHHHHHHHHHHc------CcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhcc--CceeecHH-H
Confidence 9999999999999999 9999999999876532111111112222 35889999999986433 35555543 2
Q ss_pred Cccccccc-ccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCc
Q 014163 295 DLPDELVF-HINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGV 373 (429)
Q Consensus 295 ~~~~~~~~-~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~ 373 (429)
. .+.+.. ...|+.+ ...+...+.+..++++.+..+ ....++.+++.++|++.+ + +.+ ..
T Consensus 334 ~-~~~l~~~~~~~ifS--------talpp~~aaa~laal~l~~~~--~~~r~~L~~n~~~fr~~~---G-~~~-----~s 393 (476)
T PLN02955 334 W-KQLIQSRGRSFIFS--------TAIPVPMAAAAYAAVVVARKE--KWRRKAIWERVKEFKALS---G-VDI-----SS 393 (476)
T ss_pred H-HHHHHHhCCCCeec--------ccccHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHhc---C-CCC-----CC
Confidence 2 122111 1222222 122222334444555544332 346677888888888742 2 432 36
Q ss_pred eEEEEEecCCCCCCHHHHHHHHHHHHhccCceeccc-CCCCCCCceEEEEEecc
Q 014163 374 PLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK-LPMSYPWSTKLRVISHL 426 (429)
Q Consensus 374 ~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~-~~~~~~~~~~lRi~~~~ 426 (429)
+++.+.+.+ .....++.+.|. ++|+.+... +|+...+...||++++.
T Consensus 394 PI~pI~ig~--~~~a~~~~~~L~----~~Gi~v~~i~yPtVP~g~~rLRi~lsA 441 (476)
T PLN02955 394 PIISLVVGN--QEKALKASRYLL----KSGFHVMAIRPPTVPPNSCRLRVTLSA 441 (476)
T ss_pred CEEEEEeCC--HHHHHHHHHHHH----HCCCEEEEECCCCCCCCCceEEEeeCC
Confidence 777777643 223445555665 999999887 77777788889999964
No 269
>PLN02452 phosphoserine transaminase
Probab=99.71 E-value=2.2e-15 Score=145.04 Aligned_cols=286 Identities=14% Similarity=0.035 Sum_probs=185.4
Q ss_pred cChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceE-eCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchH-
Q 014163 89 EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVG-TVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC- 166 (429)
Q Consensus 89 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~-t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s- 166 (429)
.++...++-+++++.|+++++.|.+ ..+++ +.|||.++..++..+..+ +..+++-..+.++
T Consensus 46 Rs~~f~~i~~~~~~~L~~l~~~p~~----y~v~~l~Gsgt~~~ea~~~nl~~~-------------~~~~l~~~~G~fg~ 108 (365)
T PLN02452 46 RGKEFLSIIQKAEADLRELLDIPDN----YEVLFLQGGASTQFAAIPLNLCKP-------------GDKADFVVTGSWSK 108 (365)
T ss_pred CchHHHHHHHHHHHHHHHHhCCCCC----ceEEEEeCccHHHHHHHHHhcCCC-------------CCeEEEEECCHHHH
Confidence 3567788888999999999999653 22444 457788887777766531 1334443344443
Q ss_pred -HHHHHHhcCceeEEEeccCCc--cccCHHHHHHHhhhCCeEEEEeeCCCcccc-ccChHHHHHHHHHhhhccCCCccEE
Q 014163 167 -WEKFARYFEVELKEVKLEEGY--YVMNPVKAVELVDENTICVAAILGSTLTGE-FEDVKLLHDLLTKKNEETGWDTPIH 242 (429)
Q Consensus 167 -~~~~~~~~G~~v~~v~~~~~~--~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~-~~~l~~I~~la~~~~~~~~~~~~l~ 242 (429)
+.+.|+.+|...+.....+.+ ..+++++++ ..++...|.+++..|.+|. +.|++++. +++++
T Consensus 109 r~~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~~hnETstGv~~~~~~~i~------------~~~lv 174 (365)
T PLN02452 109 KAAKEAKKYCKTNVIASGKDEKYTKIPSVSEWE--LTPDAKFVHICANETIHGVEFKDYPDVG------------NVPLV 174 (365)
T ss_pred HHHHHHHHhCCCcEEEecCCCCCCCCCChHHcC--CCCCCcEEEECCCCCCCcEecCcccccC------------CCeEE
Confidence 667778888744444222221 146777652 2346788999999999999 58887663 46899
Q ss_pred eecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCC--CCCceeccCC
Q 014163 243 VDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSD--QPTFTLNFSK 320 (429)
Q Consensus 243 vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~tr 320 (429)
||++++.+..+ .++...++|+ +++||.+ +|.|+|++++|++.+ ...-...+.|.... .......+|+
T Consensus 175 VDa~Ss~g~~p-------idv~~~~v~~--~saqK~l-GP~Gl~~v~vr~~~l-~~~~~~~~~~~~~~~~~~~~s~~~TP 243 (365)
T PLN02452 175 ADMSSNFLSKP-------VDVSKYGVIY--AGAQKNV-GPSGVTIVIIRKDLI-GNARPITPGMLDYKIHAENDSLYNTP 243 (365)
T ss_pred EECCccccCcc-------cCHHHcCEEE--Eeccccc-CCCCeEEEEEcHHHH-hhcccCCCchhhHHHHHhcCCccCCh
Confidence 99999865442 2332234544 6999987 599999999986432 12111112222111 0111233788
Q ss_pred chhHHHHHHHHHHHcCHH-HHHHHHHHHHHHHHHHHHHHHhCCCeEEe-eCCC--CceEEEEEecCCCCCCHHHHHHHHH
Q 014163 321 GSSQIIAQYYQFIRLGFE-GYKNIMENCMGNARALREGLEKTGRFEIL-SKDV--GVPLVAFSLKDSSAHTVFEISEGLR 396 (429)
Q Consensus 321 ~~~~~~~~~~al~~l~~~-g~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~--~~~~v~f~~~~~~~~~~~~~~~~L~ 396 (429)
+...++++..+++.+..+ |++.+.++.+++++++++.|++.+++... .++. +..+++|++++. ...+++.+.+.
T Consensus 244 ~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~~~--~~~~~f~~~~~ 321 (365)
T PLN02452 244 PCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDESNGFYVCPVEKSVRSLMNVPFTLGGS--ELEAEFVKEAA 321 (365)
T ss_pred hHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChHHhCCeEEEEEcCCc--hhHHHHHHHHH
Confidence 888899999999988776 89999999999999999999998666111 1111 345889998643 13444555555
Q ss_pred HHHhccCceecccCCCCCCCceEEEEEecc
Q 014163 397 KKLNRFQVVYPQKLPMSYPWSTKLRVISHL 426 (429)
Q Consensus 397 ~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~ 426 (429)
++|++....+. .. +. +|+++-+
T Consensus 322 ----~~g~~~~~G~r-~~-gg--~R~s~yn 343 (365)
T PLN02452 322 ----KAGMVQLKGHR-SV-GG--MRASIYN 343 (365)
T ss_pred ----HCCCcccCCcc-cc-Cc--eEEECcC
Confidence 99998765322 12 22 8998744
No 270
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.71 E-value=1.4e-14 Score=139.40 Aligned_cols=324 Identities=17% Similarity=0.116 Sum_probs=173.7
Q ss_pred CCCCCCCCHHHHHHHHHHhhccCCCCCccccccccCCChHH-HHHHHH---HHcCc-CCCCCccChhhHHHHHHHHHHHH
Q 014163 31 KMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPE-CDKLVM---ASINK-NYVDMDEYPVTTELQNRCVNMIA 105 (429)
Q Consensus 31 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~-~~~~~~~~~~~~~le~~~~~~la 105 (429)
.+|+. .++.++++++.....++......++.+..+...|. +.+.+. .++.. .+.+++.+++.-+.-.+...+++
T Consensus 42 ~lp~~-~sE~e~~r~~~~la~kN~~~~~fiG~G~y~~~~P~~i~~~i~~~~ef~TaYtPYQpEisQG~Lq~lfe~Qs~i~ 120 (429)
T PF02347_consen 42 NLPEP-LSEYELLRHLERLASKNKSYTSFIGAGSYTHYVPAVIDRNILSRPEFYTAYTPYQPEISQGRLQALFEYQSMIC 120 (429)
T ss_dssp --------HHHHHHHHHHHHTTS--TTS---CTTT-----HHHHH-HHCCHHCCCS-STTSGGGBHHHHHHHHHHHHHHH
T ss_pred CCCCC-CCHHHHHHHHHHHHhcCCCCCccccccccCceeChhhcCccccChhhhccCCCCCcHHHHHHHHHHHHHHHHHH
Confidence 44444 78999999999988765443222344444333344 444132 23322 23445567888888889999999
Q ss_pred HhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHH----HHHhcCceeEEE
Q 014163 106 HLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK----FARYFEVELKEV 181 (429)
Q Consensus 106 ~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~----~~~~~G~~v~~v 181 (429)
+++|++. +....-.++|.+-..++++.+.... .+.+|+++...|+.+.. .+...|++++.+
T Consensus 121 eLTGmdv-----aNaSlyd~atA~aEa~~ma~r~~~~----------~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~ 185 (429)
T PF02347_consen 121 ELTGMDV-----ANASLYDGATAAAEAMLMAVRATKR----------KRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEV 185 (429)
T ss_dssp HHHTSSE-----E-SEBSSCCHHHHHHHHHHHHHHTT-------------EEEEETTS-CHHHHHHHHHCCHCCEEEEEE
T ss_pred HhhCCCc-----cCCCCCChhHHHHHHHHHHHHhccc----------CCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEe
Confidence 9999985 1123334555444433333332200 12489999999997665 455579999999
Q ss_pred eccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc
Q 014163 182 KLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW 261 (429)
Q Consensus 182 ~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~ 261 (429)
|++++ +..| ++++.+|++.+|++. |.++++++|++++|++ |..+++ ++---... .+. .+.
T Consensus 186 ~~~~~-~~~d--------~~~~a~v~vq~Pn~~-G~~ed~~~i~~~~h~~------gal~~~-~ad~~aL~-~l~--~Pg 245 (429)
T PF02347_consen 186 PLDED-GTTD--------DDDTAAVMVQNPNTF-GVFEDIKEIADIAHAA------GALVIV-GADPNALG-GLK--SPG 245 (429)
T ss_dssp -BBTT-CSB---------STTEEEEEEESS-TT-SB--THHHHHHHHHHT------T-EEEE-CGGCCGCC-TC----GG
T ss_pred ccccc-CCcc--------ccCeEEEEeecCCCC-ceEeeHHHHHHHHHHc------CCEEEE-ecCHHHHh-CcC--Chh
Confidence 98865 5556 677899999999755 9999999999999999 998887 65532111 111 122
Q ss_pred ccCCCCeeEEEEcCcccCCCC-----CCeEEEEEeCCCCcccccccc-----cCCCCCC----------------CCCce
Q 014163 262 DFRLPLVKSINVSGHKYGLVY-----AGVGWVVWRTKDDLPDELVFH-----INYLGSD----------------QPTFT 315 (429)
Q Consensus 262 ~~~~~~~d~~~~s~hK~~~~p-----~g~g~l~~~~~~~~~~~~~~~-----~~~~~~~----------------~~~~~ 315 (429)
+ .++|.+. ..||.++.| +++|++.+++. +.+.+.-. .+--+.. ..+..
T Consensus 246 e---~GADI~v-g~~Q~fg~p~~~GGP~~G~~a~~~~--l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSN 319 (429)
T PF02347_consen 246 E---YGADIVV-GEHQTFGIPMGFGGPGAGFFAVRED--LVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSN 319 (429)
T ss_dssp G---GT-SEEE-ECCTTTT---CCC-S--EEEEE-GG--GGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT-
T ss_pred h---cCccEEe-eCCCCCcccCCCCCCCeeeEEEhhh--hhhhCCCceecccccccccceeeeccccccccccccchhhh
Confidence 2 3799994 557765444 56788888764 32322111 0101100 01111
Q ss_pred eccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHH
Q 014163 316 LNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGL 395 (429)
Q Consensus 316 ~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L 395 (429)
-||..+..++..+..+..+|.+|+++..++...+++|+.++|+++.++.+. .+.-..++.... + . ..+. .|
T Consensus 320 -IctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~~-~~~f~e~v~~~~-~--~---~~~~-~l 390 (429)
T PF02347_consen 320 -ICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLPFD-NPFFFEFVVVFS-K--D---KEVE-EL 390 (429)
T ss_dssp ---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECSS-SSSBSSEEEEES-S------HHHH-HH
T ss_pred -hhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcccC-CCCceeeeeecC-C--c---HHHH-HH
Confidence 144444444555666788999999999999999999999999997433332 221223333332 1 1 2333 36
Q ss_pred HHHHhccCce
Q 014163 396 RKKLNRFQVV 405 (429)
Q Consensus 396 ~~~l~~~G~~ 405 (429)
.++....|+.
T Consensus 391 ~~~~~~~gl~ 400 (429)
T PF02347_consen 391 LKRGIEGGLN 400 (429)
T ss_dssp HHTT----EE
T ss_pred HHHHHhcCCC
Confidence 6555577743
No 271
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.69 E-value=2e-15 Score=146.29 Aligned_cols=230 Identities=17% Similarity=0.129 Sum_probs=158.4
Q ss_pred cChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCc----
Q 014163 89 EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQ---- 164 (429)
Q Consensus 89 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h---- 164 (429)
..|...+||+. ++++.|.+. .+.+++|+.|+.+++.++.. .+++|+++...|
T Consensus 62 ~~P~~~~lE~~----la~leg~~~-------av~~sSG~aAi~~al~all~-------------~GD~Vl~~~~~yg~t~ 117 (384)
T PRK06434 62 GNPTVQAFEEK----YAVLENAEH-------ALSFSSGMGAITSAILSLIK-------------KGKRILSISDLYGQTF 117 (384)
T ss_pred CChhHHHHHHH----HHHHhCCCc-------EEEeCCHHHHHHHHHHHHhC-------------CCCEEEEecCccchHH
Confidence 45677777766 888888864 78888999999999887643 236888876533
Q ss_pred hHHHHHHHhcCceeEEEeccC-CccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEe
Q 014163 165 VCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (429)
Q Consensus 165 ~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~v 243 (429)
..+...+...|++++++++++ +++.+|+ +++++|++.+++|+++.+.|+++|+++|+++ + ++|
T Consensus 118 ~~~~~~~~~~Gi~v~fvd~~~~~~~~l~~--------~~tklv~~e~~snpt~~v~Di~~I~~la~~~------~--lvV 181 (384)
T PRK06434 118 YFFNKVLKTLGIHVDYIDTDRLNSLDFDP--------SNYDLIYAESITNPTLKVPDIKNVSSFCHEN------D--VIV 181 (384)
T ss_pred HHHHHHHHhcCcEEEEECCCChhheeecC--------CCeeEEEEEcCCCCCceeecHHHHHHHHHHc------C--eEE
Confidence 234466778899999999864 2233221 3689999999999999999999999999999 8 567
Q ss_pred ecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCC--eEEEEEeCCCCcccccccccCCCCCCCCCceeccCCc
Q 014163 244 DAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG--VGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKG 321 (429)
Q Consensus 244 D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~ 321 (429)
|++++... ..... + .++|++++|.||++.++.+ .|++++++++ +.+.+....... |..
T Consensus 182 D~t~~s~~---~~~pl----~-~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~-~~~~~~~~~~~~----------G~~- 241 (384)
T PRK06434 182 DATFASPY---NQNPL----D-LGADVVIHSATKYISGHSDVVMGVAGTNNKS-IFNNLVERRKTL----------GSN- 241 (384)
T ss_pred ECCCCCcc---cCCch----h-cCCCEEEeecccccCCCCCceEEEEecCcHH-HHHHHHHHHHhc----------CCC-
Confidence 99986422 21111 1 3699999999999988775 4555554432 212111110001 111
Q ss_pred hhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC----------CceEEEEEec
Q 014163 322 SSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV----------GVPLVAFSLK 381 (429)
Q Consensus 322 ~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----------~~~~v~f~~~ 381 (429)
...+..|..+ .+.+.+..++++..+++..+.+.|+++|.++-+.-|. ..++++|.++
T Consensus 242 -~~~~~A~l~~--~gL~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~ 308 (384)
T PRK06434 242 -PDPIQAYLAL--RGLKTLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELR 308 (384)
T ss_pred -CCHHHHHHHH--hCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEEC
Confidence 1223334333 4456688999999999999999999999875443331 3568999985
No 272
>PRK07049 methionine gamma-lyase; Validated
Probab=99.68 E-value=7.3e-15 Score=145.09 Aligned_cols=234 Identities=18% Similarity=0.050 Sum_probs=162.8
Q ss_pred ChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHH
Q 014163 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (429)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~ 169 (429)
.|....+|+ .++++.|.+. .++++||++|+..++.++.+. ++.|+++.+.|..+..
T Consensus 82 ~Pt~~~Le~----~lA~leg~~~-------~iv~~sG~~Ai~~~l~al~~~-------------Gd~Vv~~~p~Y~~~~~ 137 (427)
T PRK07049 82 HPNSEIVED----RLAVYEGAES-------AALFSSGMSAIATTLLAFVRP-------------GDVILHSQPLYGGTET 137 (427)
T ss_pred CcCHHHHHH----HHHHHhCCCc-------EEEEccHHHHHHHHHHHHhCC-------------CCEEEEcCCCcccHHH
Confidence 345556654 4888888653 888999999998888877652 3689999999987755
Q ss_pred H----HHhcCceeEEEeccCCccccCHHHHHHHhh-----hCCeEEEEeeCCCccccccChHHHHHHHHH------hhhc
Q 014163 170 F----ARYFEVELKEVKLEEGYYVMNPVKAVELVD-----ENTICVAAILGSTLTGEFEDVKLLHDLLTK------KNEE 234 (429)
Q Consensus 170 ~----~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~-----~~~~~v~~~~~~~~tG~~~~l~~I~~la~~------~~~~ 234 (429)
. +...|++++.++ . ..|++++++++. +++++|++++|+||||.+.|+++|.+++++ +
T Consensus 138 ~~~~~l~~~Gi~~v~~~--~---~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~--- 209 (427)
T PRK07049 138 LLAKTFRNFGVGAVGFA--D---GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGH--- 209 (427)
T ss_pred HHHHHHHhcCcEEEEEe--C---CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccC---
Confidence 4 355788766665 1 156777877764 468999999999999999999999999988 6
Q ss_pred cCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCC--CCCeEEEEEeCCCCcccccccccCCCCCCCC
Q 014163 235 TGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLV--YAGVGWVVWRTKDDLPDELVFHINYLGSDQP 312 (429)
Q Consensus 235 ~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~--p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 312 (429)
++++++|++|..... .. ... .++|.+..|..|++++ ...+|+++.+ ++ +.+.+.......+.
T Consensus 210 ---~~~vvvDety~~~~~--~~---pl~---~g~divv~S~SK~~gG~~glr~G~vv~~-~~-l~~~l~~~~~~~g~--- 273 (427)
T PRK07049 210 ---RPIIACDNTLLGPVF--QK---PLE---HGADLSVYSLTKYVGGHSDLVAGAVLGR-KA-LIRQVRALRSAIGT--- 273 (427)
T ss_pred ---CCEEEEECCcccccc--CC---ccc---cCCCEEEEcCceeecCCCCcEEEEEECC-HH-HHHHHHHHHHhcCC---
Confidence 899999999875321 11 111 2578999999998874 4567887643 32 22222211111111
Q ss_pred CceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEe-eCC---C--------------Cce
Q 014163 313 TFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEIL-SKD---V--------------GVP 374 (429)
Q Consensus 313 ~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~---~--------------~~~ 374 (429)
......+|++++.+. .+..++++..+++..+.+.|++.|+++-+ .|. + ..+
T Consensus 274 ---------~ls~~~a~l~~r~L~--tl~~R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~~~~~g~g~ 342 (427)
T PRK07049 274 ---------QLDPHSCWMLGRSLE--TLVLRMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYKRQCTGAGS 342 (427)
T ss_pred ---------CCCHHHHHHHHcCCC--hHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHHhhCCCCcc
Confidence 123455777766553 46778888899999999999999887533 331 0 145
Q ss_pred EEEEEecC
Q 014163 375 LVAFSLKD 382 (429)
Q Consensus 375 ~v~f~~~~ 382 (429)
+++|.+++
T Consensus 343 ~~s~~~~~ 350 (427)
T PRK07049 343 TFSFDIKG 350 (427)
T ss_pred EEEEEEcC
Confidence 89999864
No 273
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.68 E-value=2.8e-15 Score=152.93 Aligned_cols=236 Identities=13% Similarity=-0.019 Sum_probs=158.3
Q ss_pred HHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHH-HHhcCce
Q 014163 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF-ARYFEVE 177 (429)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~-~~~~G~~ 177 (429)
+..+..|++||.+.+ -.+++|+|.+|..++.+++.+ ++.|++.+++|-|+..+ +.+.|+.
T Consensus 178 eAq~~AA~~fgAd~t------yFlvNGTS~gn~a~i~a~~~~-------------Gd~VLvdRN~HKSv~hgaLiLsGa~ 238 (720)
T PRK13578 178 DAQKHAAKVFNADKT------YFVLNGTSASNKVVTNALLTP-------------GDLVLFDRNNHKSNHHGALIQAGAT 238 (720)
T ss_pred HHHHHHHHHhCCCce------EEEeCChhHHHHHHHHHhcCC-------------CCEEEeecccHHHHHHHHHHHcCCe
Confidence 455669999999862 678889999999888887752 36899999999999985 8899999
Q ss_pred eEEEeccCCc----cccCH-----HHHHHHhhhC----------CeEEEEeeCCCccccccChHHHHHH-HHHhhhccCC
Q 014163 178 LKEVKLEEGY----YVMNP-----VKAVELVDEN----------TICVAAILGSTLTGEFEDVKLLHDL-LTKKNEETGW 237 (429)
Q Consensus 178 v~~v~~~~~~----~~~d~-----~~l~~~i~~~----------~~~v~~~~~~~~tG~~~~l~~I~~l-a~~~~~~~~~ 237 (429)
+++++...+. +.+++ +.++++|.+. .+++++++| |+-|.+-++++|+++ ++.+
T Consensus 239 PVYl~P~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~p-TYdG~~ydi~~I~~~~~h~~------ 311 (720)
T PRK13578 239 PVYLETARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLG-TYDGTIYNARQVVDKIGHLC------ 311 (720)
T ss_pred EEEeeccccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECC-CCcceeecHHHHHHHhhccC------
Confidence 9999765321 23454 4588888765 367778877 555999999999998 6778
Q ss_pred CccEEeecccccccccccCCC---CccccCCCCee----EEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCC
Q 014163 238 DTPIHVDAASGGFIAPFLYPD---LEWDFRLPLVK----SINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSD 310 (429)
Q Consensus 238 ~~~l~vD~a~~~~~~~~~~~~---~~~~~~~~~~d----~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~ 310 (429)
+ ++|||+|||++.. +.+. ........++| .++-|.||.+.+-...+++.+++.. +. ....|+...
T Consensus 312 ~-~llvDEAhgah~~--F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~-i~----g~~~~v~~~ 383 (720)
T PRK13578 312 D-YILFDSAWVGYEQ--FIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNH-IK----GQARYCPHK 383 (720)
T ss_pred C-cEEEeCcchhhhc--cCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcc-cc----cccccCCHH
Confidence 7 9999999998653 3332 11111123678 9999999999888888888876532 11 001111100
Q ss_pred C--CCce-ec-cCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH-HhCCCeEEee
Q 014163 311 Q--PTFT-LN-FSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGL-EKTGRFEILS 368 (429)
Q Consensus 311 ~--~~~~-~~-~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L-~~~~~~~~~~ 368 (429)
. ..+. ++ -|++...+.++-.+.+.+....-++.+++..+++..+++.| +.+++++++.
T Consensus 384 r~~~al~m~qSTSPsY~LmASLDva~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~~~ 446 (720)
T PRK13578 384 RLNNAFMLHASTSPFYPLFAALDVNAKMHEGESGRRLWMECVKLGIEARKLILARCKLIRPFI 446 (720)
T ss_pred HHHHHHHHHcCCChHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHhCCCeeecc
Confidence 0 0000 01 12322333344443443433223667788888888888888 6777787773
No 274
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.68 E-value=1.2e-14 Score=143.48 Aligned_cols=316 Identities=15% Similarity=0.057 Sum_probs=176.9
Q ss_pred CCCCCccccccccC----CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchH
Q 014163 53 DGNPRLNLASFVTT----WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (429)
Q Consensus 53 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~ 128 (429)
+|+..+++.++.+. +..|.+.+++.+.+...... ......+++.++.++++++.|.+. ..+|+||++
T Consensus 37 dg~~~iD~~~g~~~~~lG~~~p~v~~a~~~~~~~~~~~--~~~~~~~~~~~la~~l~~~~~~~~-------v~~~~gg~e 107 (396)
T PRK02627 37 DGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHT--SNLYYIEPQEELAEKLVELSGMDK-------VFFCNSGAE 107 (396)
T ss_pred CCCEEEECCccHHhccCCCCCHHHHHHHHHHHhhcccc--ccccCCHHHHHHHHHHHhhcCCCE-------EEECCCcHH
Confidence 44444445444332 22477888887776543211 111225666778888998877643 899999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHH-HhcCceeE---EEeccCCcc----ccCHHHHHHHhh
Q 014163 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA-RYFEVELK---EVKLEEGYY----VMNPVKAVELVD 200 (429)
Q Consensus 129 a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~-~~~G~~v~---~v~~~~~~~----~~d~~~l~~~i~ 200 (429)
|+..++++++..... ....++.|++..+++..+...+ ...+.... ..+...+ . ..|++++++++.
T Consensus 108 A~~~al~~a~~~~~~------~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~l~~~i~ 180 (396)
T PRK02627 108 ANEAAIKLARKYGHK------KGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEG-FIYVPFNDIEALKAAIT 180 (396)
T ss_pred HHHHHHHHHHHHhcc------cCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCC-ceEeCCCCHHHHHHhcC
Confidence 999999988753110 0011256777666554433322 22222211 1122111 1 128999999998
Q ss_pred hCCeEEEEeeCCCcccc-c---cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc-ccCCCCeeEEEEcC
Q 014163 201 ENTICVAAILGSTLTGE-F---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSG 275 (429)
Q Consensus 201 ~~~~~v~~~~~~~~tG~-~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~d~~~~s~ 275 (429)
+++++|++..+++++|. . +.+++|.++|++| ++++++|++|.++.. ....... .++. ..|.++++
T Consensus 181 ~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~------~~~lI~DE~~~g~g~--~g~~~~~~~~~~-~pdi~t~s- 250 (396)
T PRK02627 181 DKTAAVMLEPIQGEGGVNPADKEYLQALRELCDEN------GILLILDEVQTGMGR--TGKLFAYQHYGI-EPDIMTLA- 250 (396)
T ss_pred CCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhcCCCc--cCceeeehhcCC-CCCEEEEc-
Confidence 88999999888888884 3 3489999999999 999999999986421 1110011 1121 24555543
Q ss_pred cccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Q 014163 276 HKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALR 355 (429)
Q Consensus 276 hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~ 355 (429)
|.+.++.++|+++.+++ +.+.+... . ...++ +.+.....+..++++.+.. ++..++.+++.+++.
T Consensus 251 -K~~~~G~rig~~~~~~~--~~~~~~~~-~----~~~t~----~~~~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~~~ 315 (396)
T PRK02627 251 -KGLGGGVPIGAVLAKEK--VADVFTPG-D----HGSTF----GGNPLACAAALAVIEIIEE---EGLLENAAEVGEYLR 315 (396)
T ss_pred -chhhCCcccEEEEEcHH--HHhccCCC-C----CCCCC----CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHH
Confidence 66667788999887532 21221100 0 00111 1111233334444444333 234555666666666
Q ss_pred HHHHhC----CCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEec
Q 014163 356 EGLEKT----GRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 356 ~~L~~~----~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
+.|.++ +.+..+ .....++.+.+. .+..++.+.|. ++|+.+... +...+|++.+
T Consensus 316 ~~l~~~~~~~~~~~~~--~~~g~~~~i~~~----~~~~~~~~~l~----~~Gv~v~~~------~~~~lRi~~~ 373 (396)
T PRK02627 316 AKLRELLEKYPGIKEV--RGLGLMIGIELD----RPAAEIVKKAL----EKGLLINVT------GDNVLRLLPP 373 (396)
T ss_pred HHHHHHHHhCCCeeee--ccCcEEEEEEec----CcHHHHHHHHH----HCCeEEeec------CCCEEEEECC
Confidence 666543 322211 113345556552 24556666666 889987642 2356999753
No 275
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.68 E-value=1.2e-14 Score=138.50 Aligned_cols=285 Identities=14% Similarity=-0.017 Sum_probs=186.8
Q ss_pred cChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeC-CchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEE-EcCCCchH
Q 014163 89 EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTV-GSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIV-TGANVQVC 166 (429)
Q Consensus 89 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~-g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s 166 (429)
.++...++-+++.+.|+++++.|.+. .+.+.. |||.++-.+.+.+..+ ++.++ +-..++.+
T Consensus 43 Rs~~F~~i~~~~~~~Lr~Ll~~P~~y----~Vlfl~GggT~~~ea~~~Nll~~-------------g~~~~~~~~tG~fg 105 (364)
T PRK12462 43 RSSWFSSLLAQAEADLRDLLGIPDEY----GVVFLQGGSSLQFSMIPMNFSRP-------------GAAAPEYVTTGYWS 105 (364)
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCCCC----eEEEEeccHHHHHHHHHHHcCCC-------------CCcEEEEEeCCHHH
Confidence 45678888889999999999997542 254554 5888888777776541 13232 33344443
Q ss_pred --HHHHHHhcCceeEEEeccC--C-ccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccE
Q 014163 167 --WEKFARYFEVELKEVKLEE--G-YYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPI 241 (429)
Q Consensus 167 --~~~~~~~~G~~v~~v~~~~--~-~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l 241 (429)
+.+.++.+| ++..+...+ + +.-++++++ .+.++...|.+|+..|.+|+..| ++.+.+ +.++
T Consensus 106 ~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~~d~~~v~~t~NETstGv~~~-----~~~~~~------~~ll 171 (364)
T PRK12462 106 RKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWDARAPFRHYVSNETVEGLQFP-----DAAGLP------DSPL 171 (364)
T ss_pred HHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccCCCCcEEEEccCCCCceEecC-----cccccC------CCeE
Confidence 666677777 666554321 1 124566665 34456788999999999999976 344446 8999
Q ss_pred EeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCC--CCCceeccC
Q 014163 242 HVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSD--QPTFTLNFS 319 (429)
Q Consensus 242 ~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~t 319 (429)
++|+..+.+..+ +++ ...|.+..+++|.++ |.|+++++++++.+ .+.-...+.|+... ........|
T Consensus 172 vvD~sS~~~s~p-------id~--~~~dvi~agsQKnlg-P~Gltvvivs~~al-~~~~~~~p~~ldy~~~~~~~s~~nT 240 (364)
T PRK12462 172 IADMSSDFMSRP-------FDV--EAYGMVYAHAQKNLG-PAGVTVAIIRRALL-ERVPDTLPPMLDFRTHVEHRSNYNT 240 (364)
T ss_pred EEEcCchhhCCC-------CCh--HHccEEEeeccccCC-CCceEEEEECHHHH-hhccccCCchhhHHHHHhcCCCCCC
Confidence 999988754322 222 346999999999998 89999999986532 12111112222210 001122358
Q ss_pred CchhHHHHHHHHHHHcCHH--HHHHHHHHHHHHHHHHHHHHHhCCCeEEee-CCC--CceEEEEEecCCCCCCHHHHHHH
Q 014163 320 KGSSQIIAQYYQFIRLGFE--GYKNIMENCMGNARALREGLEKTGRFEILS-KDV--GVPLVAFSLKDSSAHTVFEISEG 394 (429)
Q Consensus 320 r~~~~~~~~~~al~~l~~~--g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~--~~~~v~f~~~~~~~~~~~~~~~~ 394 (429)
++...++.+..+++.+..+ |++++.+++++.++.+++.|.+.+++.... .+. +...++|++.+. ++.+.
T Consensus 241 Ppv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~~~~RS~mnv~f~~~~~------~l~~~ 314 (364)
T PRK12462 241 PPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRAARSTMNVAFRFRQP------RLDTL 314 (364)
T ss_pred chHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcCcceEEEEcCCH------HHHHH
Confidence 8888888899999988777 999999999999999999999988654332 221 445788887542 34444
Q ss_pred HHHHHhccCceecccCCCCCCCceEEEEEec
Q 014163 395 LRKKLNRFQVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 395 L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
+.+...++|+.-...+. . .+.+|+|+=
T Consensus 315 f~~~a~~~gl~~lkGhr-~---vgg~Ras~y 341 (364)
T PRK12462 315 FKEQSTEAGFCGLSGHR-S---IGGIRASLY 341 (364)
T ss_pred HHHHHHHCCCccccCCc-c---cCceEEEcC
Confidence 44444499988654311 1 234899873
No 276
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.67 E-value=1.5e-14 Score=130.27 Aligned_cols=282 Identities=13% Similarity=0.040 Sum_probs=200.8
Q ss_pred hhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCc-----hH
Q 014163 92 VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQ-----VC 166 (429)
Q Consensus 92 ~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h-----~s 166 (429)
.-..+-+.+-+.++.++|...+ ..+++.+.|--++-.+.++.+.. .+..||+++... +.
T Consensus 73 ~W~~lp~~lgdklApLiGA~~~-----Evvv~dtts~nl~k~L~aalr~~-----------~~r~vIv~E~~~fpTdly~ 136 (407)
T COG3844 73 DWFDLPERLGDKLAPLIGARAG-----EVVVTDTTSINLFKVLAAALRPQ-----------EGRRVIVSEGDNFPTDLYI 136 (407)
T ss_pred chhhchhHHHHHhhhhhcCCCC-----ceEEeCCcchHHHHHHHHHhccC-----------CCceEEeecCCCCCcchhh
Confidence 3445566888999999999873 25566555555555555554321 124677776543 23
Q ss_pred HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecc
Q 014163 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (429)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a 246 (429)
.+..++.+|.. .+-. +.++++++++++++++.+|.+++.+..||..-++.+|.++++++ |+++..|=|
T Consensus 137 a~g~~~~~~~~-----~~~~-~~~~P~~~~~~~~dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~------galv~wDLA 204 (407)
T COG3844 137 AEGLADLLGIG-----YDLE-GVIAPRALEEAITDDVAVVLLSHVNYKTGQLLDMRAITALAHQH------GALVGWDLA 204 (407)
T ss_pred hcchhhhhccc-----ccce-eeeChHHHHHhhccceEEEEeccccccccceeeHHHHHHHHHhc------CceEEeehh
Confidence 45556666655 2222 56788899999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCe-EEEEEeCCCCcccccccccCCCCCCCC-------------
Q 014163 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGV-GWVVWRTKDDLPDELVFHINYLGSDQP------------- 312 (429)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~-g~l~~~~~~~~~~~~~~~~~~~~~~~~------------- 312 (429)
|+.+..+ .++...++|+-+.++||++.+++|. +++++.++ ...........|.+...+
T Consensus 205 HsaGavp-------~~Lh~~gaDfaigcsyKYLNgGPGapa~l~v~~~-h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga 276 (407)
T COG3844 205 HSAGAVP-------VDLHAAGADFAIGCSYKYLNGGPGAPAGLFVAPR-HRERSWPPLSGWWGHARPFAMEEVYAPGPGA 276 (407)
T ss_pred cccCCcc-------eeecccCCCeeeeeeceeccCCCCCceeEEeccc-cccccccccccccCCCCcchhhhccCcCccc
Confidence 9877653 3444568999999999999888775 66666443 333333334455553211
Q ss_pred CceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhC-C--CeEEeeCCC---CceEEEEEecCCCCC
Q 014163 313 TFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKT-G--RFEILSKDV---GVPLVAFSLKDSSAH 386 (429)
Q Consensus 313 ~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-~--~~~~~~~~~---~~~~v~f~~~~~~~~ 386 (429)
.--.+|+.+.....++..+|..+...++.+..++...+.+++.+.++.. + ++++..|.. +..-++|.++.
T Consensus 277 ~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~hp~---- 352 (407)
T COG3844 277 RRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYHPH---- 352 (407)
T ss_pred cceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEecCc----
Confidence 0013467776677778888888888889999999999999999999865 2 477877643 56788898753
Q ss_pred CHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEe
Q 014163 387 TVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVIS 424 (429)
Q Consensus 387 ~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~ 424 (429)
...+.+.|. ++|++.. ......||+..
T Consensus 353 -~~~V~qaLi----~rGVigD------~R~P~vlRfgf 379 (407)
T COG3844 353 -GYQVMQALI----DRGVIGD------FREPDVLRFGF 379 (407)
T ss_pred -HHHHHHHHH----HcCcccc------ccCCCeeeecC
Confidence 357777777 9998843 34445578754
No 277
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.67 E-value=2.3e-14 Score=141.19 Aligned_cols=301 Identities=13% Similarity=0.021 Sum_probs=172.6
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
..+|.+.+++.+.++........ ...+...++.+.++++.+.+. ..++++|++|+..+++.++......
T Consensus 56 h~~p~v~~ai~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~~~~~-------~~~~~SGseA~e~Alk~a~~~~~~~-- 124 (396)
T PRK04073 56 HRHPKIIQALKDQADKVTLTSRA--FHSDQLGPWYEKVAKLTGKDM-------VLPMNTGAEAVETAIKAARRWAYDV-- 124 (396)
T ss_pred CCCHHHHHHHHHHHhhccccccc--cCCHHHHHHHHHHHhcCCCCe-------EEEcCChHHHHHHHHHHHHHHhhhc--
Confidence 35688888888777653221111 112223345566777776532 8899999999999999987532110
Q ss_pred hcCCCCCCcEEEEcC-CCchHHHHHHHhcCce------------eEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCC
Q 014163 147 EQGKPYDKPNIVTGA-NVQVCWEKFARYFEVE------------LKEVKLEEGYYVMNPVKAVELVDENTICVAAILGST 213 (429)
Q Consensus 147 ~~g~~~~~~~vi~~~-~~h~s~~~~~~~~G~~------------v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~ 213 (429)
.|...++.+|+..+ ..|.+...+....+-. +..+|. -|++++++++++++++|+++.+++
T Consensus 125 -~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~~l~~~i~~~~~~viiep~~~ 197 (396)
T PRK04073 125 -KGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY------GDLEALKAAITPNTAAFLVEPIQG 197 (396)
T ss_pred -cCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCC------CCHHHHHHhcccCeEEEEEcCccC
Confidence 12111234566554 4565544444333311 111211 278999999988899999999999
Q ss_pred ccccccC----hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCC-CCeEEE
Q 014163 214 LTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY-AGVGWV 288 (429)
Q Consensus 214 ~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p-~g~g~l 288 (429)
++|.+.| +++|.++|++| |+++++|++|.++.. .......+......|.++++ |.++.+ +++|++
T Consensus 198 ~~G~~~~~~~~l~~l~~l~~~~------g~lli~DEv~~g~g~--~g~~~~~~~~~~~pdi~~~s--K~lg~gg~~ig~~ 267 (396)
T PRK04073 198 EAGINIPPEGFLKAARELCKEE------NVLFIADEIQTGLGR--TGKLFACDWDNVTPDMYILG--KALGGGVFPISCV 267 (396)
T ss_pred CCCCccCCHHHHHHHHHHHHHc------CCEEEEecchhCCCc--CcHHHHhhhcCCCCCEEEec--ccccCCCCcceEE
Confidence 9999855 89999999999 999999999986421 11001111111135766653 654444 778998
Q ss_pred EEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEee
Q 014163 289 VWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILS 368 (429)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~ 368 (429)
+.++ +.. +.+.. . ....++.+.+ ....+..++|+.+..+ ...++..++++++.+.|+++. ...+.
T Consensus 268 ~~~~-~i~-~~~~~--~-----~~~~t~~~~~--~~~aaa~aaL~~~~~~---~l~~~~~~~~~~l~~~L~~l~-~~~i~ 332 (396)
T PRK04073 268 AANR-DIL-GVFTP--G-----SHGSTFGGNP--LACAVSIAALEVLEEE---KLPERSLELGEYFKEQLKEID-NPMIK 332 (396)
T ss_pred EEcH-HHH-hhhcC--C-----CCCCCCCCCH--HHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHhhc-CCccc
Confidence 7753 221 22110 0 0001111211 2333333445444333 345667778999999998863 21221
Q ss_pred C-CCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEe
Q 014163 369 K-DVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVIS 424 (429)
Q Consensus 369 ~-~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~ 424 (429)
. +....++.+.+.. +..++.++|. ++|+.+... +...+|++.
T Consensus 333 ~~~~~g~~~~~~~~~----~~~~~~~~l~----~~Gv~~~~~------~~~~iRi~p 375 (396)
T PRK04073 333 EVRGRGLFIGVELNE----PARPYCEALK----EEGLLCKET------HETVIRFAP 375 (396)
T ss_pred ceecceEEEEEEecc----hHHHHHHHHH----HCCeEEecC------CCCEEEEEC
Confidence 1 1134555565532 3456666666 899987531 234799984
No 278
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.67 E-value=5.2e-15 Score=150.83 Aligned_cols=231 Identities=14% Similarity=0.101 Sum_probs=160.4
Q ss_pred HHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCcee
Q 014163 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVEL 178 (429)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v 178 (429)
+..+..|++||.+.+ -.+++|+|.+|..++.+++. .++.|++.+++|-|+..++.+.|+.+
T Consensus 199 eAe~~AA~~fgAd~t------yfvvNGTS~~n~av~~a~~~-------------~Gd~VLvdRN~HKSv~haLilsga~P 259 (714)
T PRK15400 199 EAEEYIARVFNADRS------YMVTNGTSTANKIVGMYSAP-------------AGSTVLIDRNCHKSLTHLMMMSDVTP 259 (714)
T ss_pred HHHHHHHHHhCCCcE------EEEeCchHHHHHHHHHHhcC-------------CCCEEEeecccHHHHHHHHHHcCCeE
Confidence 445668999999862 66788889999988888765 23689999999999999999999999
Q ss_pred EEEeccCCc----cccC-----HHHHHHHhhhCC-----eEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEee
Q 014163 179 KEVKLEEGY----YVMN-----PVKAVELVDENT-----ICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVD 244 (429)
Q Consensus 179 ~~v~~~~~~----~~~d-----~~~l~~~i~~~~-----~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD 244 (429)
++++...+. +.++ .+.++++|.+.+ +.+++++| |+-|.+-++++|.++|+.+ + +|||
T Consensus 260 VYl~P~rn~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~p-TYdG~~yd~~~I~~~~~~~------~--ilvD 330 (714)
T PRK15400 260 IYFRPTRNAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVK------S--IHFD 330 (714)
T ss_pred EEecccccccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECC-CCccEecCHHHHHHHhCCC------C--EEEE
Confidence 999765321 2345 899999998643 36777777 6669999999999999988 7 7999
Q ss_pred cccccccccccCCCCccccCC-CCe---e--EEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceecc
Q 014163 245 AASGGFIAPFLYPDLEWDFRL-PLV---K--SINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNF 318 (429)
Q Consensus 245 ~a~~~~~~~~~~~~~~~~~~~-~~~---d--~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (429)
+||+++.. +.+..+....+ .++ | .++-|.||.+.+-...+++.+++. .-.+.+...-..... -
T Consensus 331 EAwgah~~--F~p~~~~~sam~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~-vd~~~~n~a~~m~~S--------T 399 (714)
T PRK15400 331 SAWVPYTN--FSPIYEGKCGMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGD-VNEETFNEAYMMHTT--------T 399 (714)
T ss_pred ccchhhhc--cCcccCCcChhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCC-CCHHHHHHHHHHHcC--------C
Confidence 99998653 33322211111 234 4 999999999988877788776542 111111111111111 1
Q ss_pred CCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCC------eEEee
Q 014163 319 SKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGR------FEILS 368 (429)
Q Consensus 319 tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~------~~~~~ 368 (429)
|++...+.++-.+.+.+....-++.+++..+++..+++.|.++++ ++++.
T Consensus 400 SPsY~l~ASLD~a~~~m~~~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~ 455 (714)
T PRK15400 400 SPHYGIVASTETAAAMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQ 455 (714)
T ss_pred CcHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEecC
Confidence 333334445555555554323367888889999999999988877 66664
No 279
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.66 E-value=1.8e-16 Score=147.67 Aligned_cols=254 Identities=19% Similarity=0.220 Sum_probs=163.9
Q ss_pred ChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHh
Q 014163 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (429)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~ 147 (429)
++|.+.+++..+.... ..|...+.+.++|+. +++++|.+. ..++.+||.||.+++++...+
T Consensus 7 ~~~~m~~a~~~a~~gd-~~Yg~D~~~~~l~~~----i~~l~g~e~-------a~f~~sGT~An~~al~~~~~~------- 67 (290)
T PF01212_consen 7 PTPAMLEAMAAANVGD-DAYGEDPTTARLEER----IAELFGKEA-------ALFVPSGTMANQLALRAHLRP------- 67 (290)
T ss_dssp S-HHEEHHHHHTTSB--CCTTSSHHHHHHHHH----HHHHHTSSE-------EEEESSHHHHHHHHHHHHHHT-------
T ss_pred CCHHHHHHHHccccCC-cccCCChhHHHHHHH----HHHHcCCCE-------EEEeCCCChHHHHHHHHHHhc-------
Confidence 6788888875443333 247777877777755 788999975 679999999999999998852
Q ss_pred cCCCCCCcEEEEcCCCchHHHH---HHHhcCceeEEEeccCCccccCHHHHHHHhhh------CCeEEEEeeCCCcc-cc
Q 014163 148 QGKPYDKPNIVTGANVQVCWEK---FARYFEVELKEVKLEEGYYVMNPVKAVELVDE------NTICVAAILGSTLT-GE 217 (429)
Q Consensus 148 ~g~~~~~~~vi~~~~~h~s~~~---~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~------~~~~v~~~~~~~~t-G~ 217 (429)
...|++...+|..... .....|++++.++.+++ +.+|+++|++.+.+ ++++|.++.+++.. |.
T Consensus 68 ------~~~vi~~~~aHi~~~E~ga~~~~~G~~~~~l~~~~~-G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~ 140 (290)
T PF01212_consen 68 ------GESVICADTAHIHFDETGAIEELSGAKLIPLPSDDD-GKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGT 140 (290)
T ss_dssp ------TEEEEEETTEHHHHSSTTHHHHHTTCEEEEEBECTG-TBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB
T ss_pred ------CCceeccccceeeeeccchhhHhcCcEEEECCCccc-CCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCe
Confidence 2589999999985432 23558999999987763 78999999999986 35788888887764 55
Q ss_pred c---cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCC
Q 014163 218 F---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (429)
Q Consensus 218 ~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~ 294 (429)
+ +++++|+++||+| |+++|.|||--+..+........ ++ ..++|++++++.|.++.|.| ++++.++ +
T Consensus 141 ~~s~~el~ai~~~a~~~------gl~lhmDGARl~~a~~~~~~~~~-e~-~~~~D~v~~~~tK~~g~~~G-avl~~~~-~ 210 (290)
T PF01212_consen 141 VYSLEELRAISELAREH------GLPLHMDGARLANAAAALGVSLA-EI-AAGADSVSFGGTKNGGAPGG-AVLAGNK-E 210 (290)
T ss_dssp ---HHHHHHHHHHHHHH------T-EEEEEETTHHHHHCHHHHHHH-HH-HTTSSEEEEETTSTT-SSSE-EEEEESH-H
T ss_pred eCCHHHHHHHHHHHHhC------ceEEEEehhhHHHhhhcccccHH-HH-hhhCCEEEEEEEcccccccc-eEEEech-H
Confidence 4 6788999999999 99999999974322211100000 11 14799999999999887766 4555443 3
Q ss_pred CcccccccccCCCCCCCCCceeccCCchhHHHHH-----HHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeC
Q 014163 295 DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQ-----YYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSK 369 (429)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~-----~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~ 369 (429)
.+.+... ...++++.. +. ..++++ ..++..+ +.......+..+++++|.+.|++++ +.+..+
T Consensus 211 ~i~~~~~-~~k~~gg~~--------~~-~G~~~a~~~~~~~~l~~l--~~~~~~~~~~~~~A~~La~~l~~~~-~~~~~~ 277 (290)
T PF01212_consen 211 FIAKARR-QRKRLGGGM--------RQ-AGVLAAAELYQFAALRAL--ELWLERARHANAMAKRLAAGLEALG-GVLPRP 277 (290)
T ss_dssp HHHHHHH-HHHHHTHHH--------HH-TTHHHHHHHHHHHHHCHE--ECSHHHHHCHHHHHHCHHHCHHEEC-EEEETT
T ss_pred HHHHHHH-HHHHhccCe--------ee-cceeeeechhhHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHHCC-CcccCC
Confidence 2222111 112222210 00 011111 1222222 2225666778889999999999998 555544
Q ss_pred C
Q 014163 370 D 370 (429)
Q Consensus 370 ~ 370 (429)
+
T Consensus 278 ~ 278 (290)
T PF01212_consen 278 V 278 (290)
T ss_dssp S
T ss_pred C
Confidence 3
No 280
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.66 E-value=1.2e-13 Score=129.17 Aligned_cols=328 Identities=13% Similarity=0.035 Sum_probs=201.8
Q ss_pred CCCCCCHHHHHHHHHHhhccCCCCCccccccccCCChHHHHH-HHHH---HcCc-CCCCCccChhhHHHHHHHHHHHHHh
Q 014163 33 PDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPECDK-LVMA---SINK-NYVDMDEYPVTTELQNRCVNMIAHL 107 (429)
Q Consensus 33 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~-~~~~~~~~~~~~~le~~~~~~la~l 107 (429)
...+.++.+++..+.+....+......++.+......|.+.+ .+.+ .+.. .+.+++.+++.-+.-.+....+++|
T Consensus 53 ~~~~~sE~e~l~~l~~ia~kN~~~~sfiG~GyY~~~~P~vI~rnile~pewyTaYTPYQpEISQGrLqaLfefQtlv~dL 132 (450)
T COG0403 53 LPKPLSEYEALAELKEIASKNKVFTSFIGAGYYDTYTPPVILRNILENPEWYTAYTPYQPEISQGRLEALFEFQTLVADL 132 (450)
T ss_pred CCCCCCHHHHHHHHHHHHhcCchhhhhccCcccCCcCcHHHHHHhhcCccccccCCCCchhhhhHHHHHHHHHHHHHHHH
Confidence 344568999999999988765532222455555444454333 3221 1111 1222334456666666788899999
Q ss_pred hCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHH----HHhcCceeEEEec
Q 014163 108 FNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKF----ARYFEVELKEVKL 183 (429)
Q Consensus 108 ~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~----~~~~G~~v~~v~~ 183 (429)
.|++. ++...-.++|.+--.++++.+... .++..++++...|+..... ++-+|+++..++.
T Consensus 133 TGm~V-----ANASm~DeaTAaAEAm~ma~r~~k----------~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~ 197 (450)
T COG0403 133 TGLDV-----ANASMLDEATAAAEAMLMAKRVTK----------KKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDA 197 (450)
T ss_pred hCCCc-----ccchhhhhHHHHHHHHHHHHHhhc----------CcCceEEecCCCCHHHHHHHHhhcccCceEEEEecc
Confidence 99986 224444566655544444443320 0135899999999975544 4445666666655
Q ss_pred cCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcccc
Q 014163 184 EEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF 263 (429)
Q Consensus 184 ~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~ 263 (429)
+ |.++|+++.+.++..+++-+|++.-+.+.++++|.+.+|++ +.+++|=+=--. +.++.+.-
T Consensus 198 ~------d~~~l~~~~~~~~~gv~vQyP~~~G~~~~d~~~l~~~~h~~------~al~~v~aDpla--L~LL~pPG---- 259 (450)
T COG0403 198 D------DLDDLESADDGDVFGVLVQYPNTFGIVEEDLRALIEAAHSA------GALVIVAADPLA--LGLLKPPG---- 259 (450)
T ss_pred c------hhhhhhhccccCeEEEEEecCCCCCccchhHHHHHHHHhhc------CCEEEEEechhH--hhccCCcc----
Confidence 3 78888888334789999999986633778899999999999 887776432211 11133221
Q ss_pred CCCCeeEEEEcCcccC----CCCCCeEEEEEeCCCCcccccccccCCCCC------------------------CCCCce
Q 014163 264 RLPLVKSINVSGHKYG----LVYAGVGWVVWRTKDDLPDELVFHINYLGS------------------------DQPTFT 315 (429)
Q Consensus 264 ~~~~~d~~~~s~hK~~----~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~ 315 (429)
..++|.+..+++-++ ++++.+|++.++++- .+. .+.-+-+ ...+..
T Consensus 260 -e~GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~--~R~---mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSN 333 (450)
T COG0403 260 -EFGADIVVGSAQRFGVPMGFGGPHAGYFAVKDEF--KRQ---MPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSN 333 (450)
T ss_pred -ccCCceEEecCcccCCCcCCCCcceeeeeEhHhH--hhc---CCCceeeeeecCCCCchhhhhHHHHHHHHhhhccchh
Confidence 237999999999974 334557888887532 222 1111111 001111
Q ss_pred eccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEeeCCCCceEEEEEecCCCCCCHHHHHHH
Q 014163 316 LNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTG-RFEILSKDVGVPLVAFSLKDSSAHTVFEISEG 394 (429)
Q Consensus 316 ~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~ 394 (429)
+ ||.-....+.....+.++|.+|++++.++..+++.++.++|++++ +++++.+. .+..+++++.. +.+..
T Consensus 334 I-CTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~~-fFdt~~v~~~~-------~~~~~ 404 (450)
T COG0403 334 I-CTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFDH-FFDTFTVRVPE-------EVAEA 404 (450)
T ss_pred h-hHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEecccc-ceeeEEEecch-------hHHHH
Confidence 1 333222222233334668999999999999999999999999665 48887664 67778888742 44555
Q ss_pred HHHHHhccCceecc
Q 014163 395 LRKKLNRFQVVYPQ 408 (429)
Q Consensus 395 L~~~l~~~G~~~~~ 408 (429)
|.++....|+-++.
T Consensus 405 l~~~~~~~G~~L~~ 418 (450)
T COG0403 405 LLAAAIAGGINLRR 418 (450)
T ss_pred HHHHHHhcCCceee
Confidence 55555578887764
No 281
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.66 E-value=3.5e-14 Score=130.29 Aligned_cols=259 Identities=19% Similarity=0.184 Sum_probs=174.2
Q ss_pred cChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCch---
Q 014163 89 EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQV--- 165 (429)
Q Consensus 89 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~--- 165 (429)
..|....+|++ ++.|-|-- ....+.+|..|+.+++..+.. .++.|+.+..-|.
T Consensus 60 ~NPT~~vlE~R----iAaLEGG~-------aa~a~aSG~AA~~~ai~~la~-------------aGD~iVss~~LYGGT~ 115 (426)
T COG2873 60 MNPTTDVLEER----IAALEGGV-------AALAVASGQAAITYAILNLAG-------------AGDNIVSSSKLYGGTY 115 (426)
T ss_pred cCchHHHHHHH----HHHhhcch-------hhhhhccchHHHHHHHHHhcc-------------CCCeeEeeccccCchH
Confidence 45777888876 66665553 367888999999999998865 2368887776443
Q ss_pred -HHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEee
Q 014163 166 -CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVD 244 (429)
Q Consensus 166 -s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD 244 (429)
-+....+.+|+++++|+. .|++.++++|+++|++|++-.-.||.+.+-|+++|+++||++ |++++||
T Consensus 116 ~lf~~tl~~~Gi~v~fvd~------~d~~~~~~aI~~nTkavf~EtigNP~~~v~Die~ia~iAh~~------gvpliVD 183 (426)
T COG2873 116 NLFSHTLKRLGIEVRFVDP------DDPENFEAAIDENTKAVFAETIGNPGLDVLDIEAIAEIAHRH------GVPLIVD 183 (426)
T ss_pred HHHHHHHHhcCcEEEEeCC------CCHHHHHHHhCcccceEEEEeccCCCccccCHHHHHHHHHHc------CCcEEEe
Confidence 355566889999999963 358999999999999999999999999999999999999999 9999999
Q ss_pred cccccccccccCCCCccccCCCCeeEEEEcCcccCCCC-CCeEEEEEeCCCCcccccccccCCCCCCCCCcee-------
Q 014163 245 AASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY-AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTL------- 316 (429)
Q Consensus 245 ~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p-~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 316 (429)
...+... +.-.. + -++|.++-|..||+++. ..+|.+++-... + + +.....|.....+..++
T Consensus 184 NT~atpy---l~rP~--~---hGADIVvHS~TK~igGhGt~iGG~iVD~G~-F-D-w~~~~rfP~~~~p~p~YhGl~~~~ 252 (426)
T COG2873 184 NTFATPY---LCRPI--E---HGADIVVHSATKYIGGHGTAIGGVIVDGGK-F-D-WTANGRFPEFTTPDPSYHGLVYTE 252 (426)
T ss_pred cCCCcce---ecchh--h---cCCCEEEEeecccccCCccccceEEEeCCc-c-c-cccCCCCcccCCCCccccceehhh
Confidence 9987533 22111 1 26999999999998654 334555553221 1 0 00011121111111111
Q ss_pred -------------ccCCchhHHHHHHHHH-HHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC-----------
Q 014163 317 -------------NFSKGSSQIIAQYYQF-IRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV----------- 371 (429)
Q Consensus 317 -------------~~tr~~~~~~~~~~al-~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----------- 371 (429)
.+-|.....++-..++ -..|.+.+.-+++|+.+++..+.+.|++.|.+..++-|.
T Consensus 253 ~~g~~af~~~~r~~~lRDlGa~lsPfnAfl~lqGlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la~ 332 (426)
T COG2873 253 TFGNAAFIIKARVQLLRDLGATLSPFNAFLLLQGLETLSLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALAK 332 (426)
T ss_pred hcccHHHHHHHHHHHHHhcccccCcHHHHHHHhchhhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHHH
Confidence 1111111111122222 223678888999999999999999999999887776441
Q ss_pred ------CceEEEEEecCCCCCCHHHHHHHH
Q 014163 372 ------GVPLVAFSLKDSSAHTVFEISEGL 395 (429)
Q Consensus 372 ------~~~~v~f~~~~~~~~~~~~~~~~L 395 (429)
...+++|.+++. ......+.+.|
T Consensus 333 kyl~~g~g~vltF~~kgg-~ea~~~fi~~l 361 (426)
T COG2873 333 KYLPKGAGAVLTFGVKGG-YEAGKKFIDAL 361 (426)
T ss_pred hhccCCCceEEEEEecCh-HHHHHHHHHHH
Confidence 246899999763 12334444443
No 282
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.65 E-value=2.2e-14 Score=138.81 Aligned_cols=235 Identities=23% Similarity=0.143 Sum_probs=161.8
Q ss_pred ChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHH
Q 014163 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK 169 (429)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~ 169 (429)
.|....+|+. ++++.|... ...+++|..|+..++.++... ++.|+++...|.....
T Consensus 54 nPt~~~le~~----la~Le~g~~-------a~~~~SGmaAi~~~l~~ll~~-------------Gd~iv~~~~~Y~~t~~ 109 (386)
T PF01053_consen 54 NPTVRALEQR----LAALEGGED-------ALLFSSGMAAISAALLALLKP-------------GDHIVASDDLYGGTYR 109 (386)
T ss_dssp -HHHHHHHHH----HHHHHT-SE-------EEEESSHHHHHHHHHHHHS-T-------------TBEEEEESSSSHHHHH
T ss_pred cccHHHHHHH----HHHhhcccc-------eeeccchHHHHHHHHHhhccc-------------CCceEecCCccCcchh
Confidence 4555666654 788888853 778889999998888887652 3688888887775444
Q ss_pred H----HHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCC-ccEEee
Q 014163 170 F----ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWD-TPIHVD 244 (429)
Q Consensus 170 ~----~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~-~~l~vD 244 (429)
. +...|+++.+++. -|+++++++++++|++|++-.|+||+..+.|+++|+++||++ | ++++||
T Consensus 110 ~~~~~l~~~gv~v~~~d~------~d~~~l~~~l~~~t~~v~~EspsNP~l~v~Dl~~i~~~a~~~------g~~~~vVD 177 (386)
T PF01053_consen 110 LLEELLPRFGVEVTFVDP------TDLEALEAALRPNTKLVFLESPSNPTLEVPDLEAIAKLAKEH------GDILVVVD 177 (386)
T ss_dssp HHHHCHHHTTSEEEEEST------TSHHHHHHHHCTTEEEEEEESSBTTTTB---HHHHHHHHHHT------TT-EEEEE
T ss_pred hhhhhhcccCcEEEEeCc------hhHHHHHhhccccceEEEEEcCCCcccccccHHHHHHHHHHh------CCceEEee
Confidence 3 4446888887753 478999999999999999999999999999999999999999 9 999999
Q ss_pred cccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCe--EEEEEeCCCCcccccccccCCCCCCCCCceeccCCch
Q 014163 245 AASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGV--GWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGS 322 (429)
Q Consensus 245 ~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~--g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~ 322 (429)
..++... ... +.. .++|.+..|..|++.+...+ |.+++++...+...+.......+ .-
T Consensus 178 nT~atp~---~~~--pL~---~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G----------~~-- 237 (386)
T PF01053_consen 178 NTFATPY---NQN--PLE---LGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLG----------AT-- 237 (386)
T ss_dssp CTTTHTT---TC---GGG---GT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-----------B--
T ss_pred cccccee---eec--cCc---CCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhcC----------cc--
Confidence 9998643 221 112 26999999999999766543 66665542222222211111111 11
Q ss_pred hHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeE-EeeCC---------------CCceEEEEEecC
Q 014163 323 SQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFE-ILSKD---------------VGVPLVAFSLKD 382 (429)
Q Consensus 323 ~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~---------------~~~~~v~f~~~~ 382 (429)
......|..++ |...+..++++..+++..+.+.|++.|.++ +..|. ...++++|.+++
T Consensus 238 ~~p~da~ll~r--gl~Tl~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~ 311 (386)
T PF01053_consen 238 LSPFDAWLLLR--GLRTLPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKG 311 (386)
T ss_dssp --HHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESS
T ss_pred chHHHHHHHhc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEecc
Confidence 23344554444 456688899999999999999999999886 44441 134699999975
No 283
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.64 E-value=1.2e-13 Score=136.52 Aligned_cols=310 Identities=13% Similarity=-0.009 Sum_probs=171.6
Q ss_pred ChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHh
Q 014163 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (429)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~ 147 (429)
.+|.+.+++.+.++.-....... ..+..+++.+.+++++|.+. ..++++|++|+..+++.++.....+
T Consensus 48 ~~p~v~~a~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~-------~~~~~SGs~A~e~al~~~~~~~~~~--- 115 (400)
T PTZ00125 48 CHPKILAALINQAQKLTLTSRAF--YNDVLGLAEKYITDLFGYDK-------VLPMNSGAEAGETALKFARKWGYEV--- 115 (400)
T ss_pred CCHHHHHHHHHHHHhcccccccc--cCHHHHHHHHHHHhCCCCCE-------EEEeCCcHHHHHHHHHHHHHHHHhc---
Confidence 46788888877765422111111 12244466666788777643 7899999999999999887532111
Q ss_pred cCCCCCCcEEEEcC-CCchHHHHHHHhcCceeE---EEeccCC---ccccCHHHHHHHhh-hCCeEEEEeeCCCcccccc
Q 014163 148 QGKPYDKPNIVTGA-NVQVCWEKFARYFEVELK---EVKLEEG---YYVMNPVKAVELVD-ENTICVAAILGSTLTGEFE 219 (429)
Q Consensus 148 ~g~~~~~~~vi~~~-~~h~s~~~~~~~~G~~v~---~v~~~~~---~~~~d~~~l~~~i~-~~~~~v~~~~~~~~tG~~~ 219 (429)
.|.+..+..|++.+ ..|.+........+-... +.+..++ -...|+++|++.++ +++++|++..+.+++|.+.
T Consensus 116 ~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~ep~~~~~G~~~ 195 (400)
T PTZ00125 116 KGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVEPIQGEAGVIV 195 (400)
T ss_pred cCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEcCccCCCCCcc
Confidence 11111223555544 455544444333332110 0011000 01138999999996 5788888888899999987
Q ss_pred C----hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCC-CeEEEEEeCCC
Q 014163 220 D----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYA-GVGWVVWRTKD 294 (429)
Q Consensus 220 ~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~-g~g~l~~~~~~ 294 (429)
| +++|.++|++| |+++++|++|.++.. ....+.....-...|.++++ |++.++. ++|+++.+++
T Consensus 196 ~~~~~l~~l~~l~~~~------~~lli~Dev~~g~g~--~G~~~~~~~~~~~pd~~~~s--K~l~~g~~~ig~v~~~~~- 264 (400)
T PTZ00125 196 PDDGYLKQVYELCKKY------NVLLIVDEIQTGLGR--TGKLLAHDHEGVKPDIVLLG--KALSGGLYPISAVLANDD- 264 (400)
T ss_pred CCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--cchhhHHHhcCCCCCEEEEc--ccccCCCcCcEEEEEcHH-
Confidence 7 99999999999 999999999975321 11000111111135777654 8777664 8899887542
Q ss_pred CcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhC----CCeEEeeCC
Q 014163 295 DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKT----GRFEILSKD 370 (429)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~ 370 (429)
.. +.+... .. ..++.+++ ....+..++++.+..+++ .++..++.+++++.|+++ +.+..+ .+
T Consensus 265 ~~-~~~~~~--~~-----~~t~~~~~--~~~~aa~~~l~~i~~~~~---~~~~~~~~~~l~~~l~~l~~~~~~~~~~-~~ 330 (400)
T PTZ00125 265 VM-LVIKPG--EH-----GSTYGGNP--LACAVAVEALEVLKEEKL---AENAQRLGEVFRDGLKELLKKSPWVKEI-RG 330 (400)
T ss_pred HH-hhccCC--CC-----CCCCCcCH--HHHHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHhcCCCeEEE-ec
Confidence 21 211110 00 00111222 233334444555443333 345555667777777654 322222 22
Q ss_pred CCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEec
Q 014163 371 VGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 371 ~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
...++.+.+..+...+..++.+.|. ++|+.+.+. +...+|++.+
T Consensus 331 -~g~~~~v~~~~~~~~~~~~~~~~l~----~~Gv~v~~~------~~~~lRi~~~ 374 (400)
T PTZ00125 331 -KGLLNAIVFDHSDGVNAWDLCLKLK----ENGLLAKPT------HDNIIRFAPP 374 (400)
T ss_pred -ccEEEEEEEccCcchHHHHHHHHHH----HCCeEEeec------CCCEEEEECC
Confidence 3445556554322334556666666 899887531 3456999853
No 284
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.64 E-value=4.2e-15 Score=129.63 Aligned_cols=269 Identities=14% Similarity=0.144 Sum_probs=179.2
Q ss_pred CceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHH
Q 014163 119 VGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVEL 198 (429)
Q Consensus 119 ~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~ 198 (429)
..++..|+.|.+.+.+++.+.+ | +..|+..++++..|.-.|...+++|+.||..++ |.+|.|++.+.
T Consensus 88 nic~GvGsDE~ID~iiR~~c~P--------G----keKIl~cPPtysMY~v~A~iNd~eVvkvpl~pd-F~lnvdai~ev 154 (375)
T KOG0633|consen 88 NICVGVGSDELIDLIIRCVCDP--------G----KEKILDCPPTYSMYVVDAAINDAEVVKVPLNPD-FSLNVDAIAEV 154 (375)
T ss_pred ceEEecCcHHHHHHHHhheecC--------C----ccceeecCCcceeEEEEeecCCceEEEecCCCC-ccccHHHHHHH
Confidence 3788899999999999998873 2 357888888988877778889999999999886 99999999999
Q ss_pred hhhC--CeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCc
Q 014163 199 VDEN--TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGH 276 (429)
Q Consensus 199 i~~~--~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~h 276 (429)
++.+ ++++++++|.||||.+-..+.|.++.+-. .+.+++||+||-.|.. ......+.-..++.-++-.-++
T Consensus 155 l~~ds~iK~~F~tSPgNPtg~~ik~~di~KiLe~p-----~nglVVvDEAYidFsg--~~S~~~lV~kYpNLivlqTlSK 227 (375)
T KOG0633|consen 155 LELDSKIKCIFLTSPGNPTGSIIKEDDILKILEMP-----DNGLVVVDEAYIDFSG--VESRMKLVKKYPNLIVLQTLSK 227 (375)
T ss_pred HhccccceEEEEcCCCCCCcccccHHHHHHHHhCC-----CCcEEEEeeeeEeecc--ccccchHhHhCCceeehhhhhh
Confidence 8864 68999999999999997777777777543 2789999999965431 1111111113445555556677
Q ss_pred ccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHH
Q 014163 277 KYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG---FEGYKNIMENCMGNARA 353 (429)
Q Consensus 277 K~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~---~~g~~~~~~~~~~~~~~ 353 (429)
.++.++.++|+.++... +... +......+.+ +..+-.++|.++. ...++...+...+.+.+
T Consensus 228 sfGLAGiRvG~~~~~~~--ia~i-------ln~~KaPYNi-------S~~~s~~AL~Als~~n~kkme~~rdaiv~er~R 291 (375)
T KOG0633|consen 228 SFGLAGIRVGYGAFPLS--IAEI-------LNRAKAPYNI-------SVAGSVAALAALSDSNGKKMEDVRDAIVRERER 291 (375)
T ss_pred hcCcceeEeecccccHH--HHHH-------HHhccCCccc-------cchhHHHHHHhcCcccchHHHHHHHHHHHHHHH
Confidence 78999999998765321 1111 1111111111 1112223344443 23466667777788889
Q ss_pred HHHHHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHH-HhccCceecccCCCCCCCceEEEEEecccc
Q 014163 354 LREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKK-LNRFQVVYPQKLPMSYPWSTKLRVISHLRR 428 (429)
Q Consensus 354 l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~-l~~~G~~~~~~~~~~~~~~~~lRi~~~~~~ 428 (429)
|.+.|.+++.+.-+.-+...+++.+++.+.. +.++++|..+ +-..|++++-+ .....-.+++||+++.+.
T Consensus 292 L~keLt~v~~~~~~~gg~daNFiLi~v~~~~----n~~akkly~q~at~~gVvVRfr-gse~~c~G~lRitvGt~E 362 (375)
T KOG0633|consen 292 LFKELTEVPFLNDYPGGSDANFILIEVTGGD----NGMAKKLYKQDATKMGVVVRFR-GSEEGCKGYLRITVGTPE 362 (375)
T ss_pred HHHHhhcCccccCCCCcccccEEEEEEcCCC----cHHHHHHHHHHHHhcceEEEEc-CCccccceeEEEEcCCcc
Confidence 9999999985543222236788888886431 2334444333 33678888743 222234567999998763
No 285
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.64 E-value=2e-13 Score=134.18 Aligned_cols=304 Identities=12% Similarity=-0.045 Sum_probs=167.8
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
..+|.+.+++.+.+++-...... ...+...++.+.++++.+.+ .+.++++|++|+..++++++.....
T Consensus 47 h~~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~la~~l~~~~~~~-------~v~~~~sGseA~~~al~~ar~~~~~--- 114 (389)
T PRK01278 47 HAHPHLVEALKEQAEKLWHVSNL--YRIPEQERLAERLVENSFAD-------KVFFTNSGAEAVECAIKTARRYHYG--- 114 (389)
T ss_pred CCCHHHHHHHHHHHHhcCccccc--cCChHHHHHHHHHHhhCCCC-------EEEEcCCcHHHHHHHHHHHHHHHHh---
Confidence 34678888888777642221111 11223335556677766543 2899999999999999998753211
Q ss_pred hcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEE----eccCCccc----cCHHHHHHHhhhCCeEEEEeeCCCccccc
Q 014163 147 EQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEV----KLEEGYYV----MNPVKAVELVDENTICVAAILGSTLTGEF 218 (429)
Q Consensus 147 ~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v----~~~~~~~~----~d~~~l~~~i~~~~~~v~~~~~~~~tG~~ 218 (429)
+|. .++.+|++.+..|+.+...+...+...... |..++ +. .|++++++++++++++|++...++++|..
T Consensus 115 -~G~-~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~l~~~l~~~~~avivep~~~~~G~~ 191 (389)
T PRK01278 115 -KGH-PERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPG-FDQVPFGDIEALKAAITPNTAAILIEPIQGEGGIR 191 (389)
T ss_pred -cCC-CCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCC-ceEeCCCCHHHHHHhhCCCeEEEEEecccCCCCCc
Confidence 221 123478777766655443333333222211 11111 22 58999999998888999888777777733
Q ss_pred ----cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc-ccCCCCeeEEEEcCcccCCCCCCeEEEEEeCC
Q 014163 219 ----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (429)
Q Consensus 219 ----~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~ 293 (429)
+.+++|.++|++| |+++++|++|.++.. ....... .+++ ..|.+++ -|.+.+++++|+++.+++
T Consensus 192 ~~~~~~l~~l~~l~~~~------g~~lI~DEv~~g~g~--~g~~~~~~~~~~-~pdi~t~--sK~l~~G~~ig~~~~~~~ 260 (389)
T PRK01278 192 PAPDEFLKGLRQLCDEN------GLLLIFDEVQCGMGR--TGKLFAHEWAGV-TPDIMAV--AKGIGGGFPLGACLATEE 260 (389)
T ss_pred CCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--CCcceeecccCC-CCCEEEE--ehhccCCcceEEEEEcHH
Confidence 5799999999999 999999999986421 1110111 1122 2455443 477767788999887542
Q ss_pred CCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhC----CCeEEeeC
Q 014163 294 DDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKT----GRFEILSK 369 (429)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~ 369 (429)
. .+.+.. .....++ +.+.....+..++++.+..+. ..++..++.+++.+.|+++ +++.....
T Consensus 261 -~-~~~~~~-------~~~~~t~--~~~~~~~aaa~a~l~~l~~~~---~~~~~~~~~~~l~~~l~~l~~~~~~~~~~v~ 326 (389)
T PRK01278 261 -A-AKGMTP-------GTHGSTY--GGNPLAMAVGNAVLDVILAPG---FLDNVQRMGLYLKQKLEGLVDRFPDVIEEVR 326 (389)
T ss_pred -H-HhccCC-------CCCCCCC--CccHHHHHHHHHHHHHHhhhH---HHHHHHHHHHHHHHHHHHHHhhCCCceeeEe
Confidence 2 122110 0001111 111123333444455543332 3444555556666665543 21111111
Q ss_pred CCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEec
Q 014163 370 DVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 370 ~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
+ ...++.+.+.. +..++.+.|. ++|+.+.+. +...+|++..
T Consensus 327 g-~G~~~~i~~~~----~~~~~~~~l~----~~GV~~~p~------~~~~lR~~p~ 367 (389)
T PRK01278 327 G-KGLLLGLKCVV----PNRDLVQALR----DEGLLTVGA------GDNVVRLLPP 367 (389)
T ss_pred c-ccEEEEEEEec----CHHHHHHHHH----HCCeEEeec------CCCEEEEeCC
Confidence 1 22334444421 3566777777 889886531 2456999853
No 286
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.63 E-value=6.9e-14 Score=142.67 Aligned_cols=224 Identities=14% Similarity=0.094 Sum_probs=154.8
Q ss_pred HHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCcee
Q 014163 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVEL 178 (429)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v 178 (429)
+..+..|++||.+.. -.+++|+|.+|..++.+++. .++.|++++++|-|+..++.+.|+.+
T Consensus 199 eAe~~aA~~fgAd~t------yfvvNGTS~~n~av~~a~~~-------------~Gd~VLvdRN~HKSv~~aLilsga~P 259 (713)
T PRK15399 199 EAEEYIARTFGAEQS------YIVTNGTSTSNKIVGMYAAP-------------AGSTLLIDRNCHKSLAHLLMMSDVVP 259 (713)
T ss_pred HHHHHHHHHhCCCcE------EEEeCChHHHHHHHHHHhcC-------------CCCEEEeecccHHHHHHHHHHcCCee
Confidence 444668999999862 67888999999988888765 23689999999999999999999999
Q ss_pred EEEeccCCc----cccCH-----HHHHHHhhhC-----CeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccE-Ee
Q 014163 179 KEVKLEEGY----YVMNP-----VKAVELVDEN-----TICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPI-HV 243 (429)
Q Consensus 179 ~~v~~~~~~----~~~d~-----~~l~~~i~~~-----~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l-~v 243 (429)
++++...+. +.+++ +.++++|.+. |+.+++++| |+-|.+-++++|.++| |+.+ ||
T Consensus 260 VYl~P~~n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~p-TYdGi~yd~~~I~~~~---------g~~~ilv 329 (713)
T PRK15399 260 IWLKPTRNALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNS-TYDGLLYNTDWIKQTL---------DVPSIHF 329 (713)
T ss_pred EEecccccccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECC-CCCceeeCHHHHHHHh---------CCCEEEE
Confidence 999764211 23455 9999999864 357777777 6669999999999998 4445 89
Q ss_pred ecccccccccccCCCCc--ccc-CCCCeeEE---EEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceec
Q 014163 244 DAASGGFIAPFLYPDLE--WDF-RLPLVKSI---NVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLN 317 (429)
Q Consensus 244 D~a~~~~~~~~~~~~~~--~~~-~~~~~d~~---~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (429)
|+||+++.. +.+..+ .-+ ...++|.+ +-|.||.+.+-...+++.+++. .-.+.+...-.....
T Consensus 330 DEAhgah~~--F~p~~~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~-vd~~~~n~a~~m~~S-------- 398 (713)
T PRK15399 330 DSAWVPYTH--FHPIYQGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGE-YDEETFNEAFMMHTS-------- 398 (713)
T ss_pred eccchhhhh--cCcccCCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCC-CCHHHHHHHHHHHcC--------
Confidence 999997643 233221 111 11245666 9999999999888999988652 111111111111111
Q ss_pred cCCchhHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHHHHHHhCCC
Q 014163 318 FSKGSSQIIAQYYQFIRLGF-EGYKNIMENCMGNARALREGLEKTGR 363 (429)
Q Consensus 318 ~tr~~~~~~~~~~al~~l~~-~g~~~~~~~~~~~~~~l~~~L~~~~~ 363 (429)
-|++...++++-.+.+.+.. .| ++.+++..+++..+++.|.++.+
T Consensus 399 TSPsY~LmASLD~a~~~m~~~~G-~~l~~~~i~~a~~fR~~l~~~~~ 444 (713)
T PRK15399 399 TSPSYPIVASVETAAAMLRGNPG-KRLINRSVERALHFRKEVQRLRE 444 (713)
T ss_pred CCcHHHHHHHHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhccc
Confidence 13333344455555555543 44 67788888899999999988765
No 287
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.60 E-value=6.4e-13 Score=121.37 Aligned_cols=305 Identities=12% Similarity=0.073 Sum_probs=200.5
Q ss_pred CChHHHHHHHHHHcCcCCC-------CCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCce--EeCCchHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYV-------DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGV--GTVGSSEAIMLAGLAF 137 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~--~t~g~t~a~~~al~a~ 137 (429)
+....+.|++-+.+.+-+. .|....-..++|.-+.+...+.||++++ -||+ -..+||-||+.+..++
T Consensus 51 Fts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LCq~RALeaF~ldp~----kWGVNVQp~SGSPANfavYtal 126 (477)
T KOG2467|consen 51 FTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLCQKRALEAFGLDPE----KWGVNVQPYSGSPANFAVYTAL 126 (477)
T ss_pred chHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHHHHHHHHHhCCCHH----HCceeeccCCCCchhhHHHhhh
Confidence 3456677777776654221 1334446678888888888999999874 3443 3458999999887777
Q ss_pred HHHHHHHHHhcCCCCCCcEE---EEcCCCchHHHHHHHhcCce-----eEEE--eccCCccccCHHHHHHHhhh-CCeEE
Q 014163 138 KRKWQQKRKEQGKPYDKPNI---VTGANVQVCWEKFARYFEVE-----LKEV--KLEEGYYVMNPVKAVELVDE-NTICV 206 (429)
Q Consensus 138 ~~~~~~~~~~~g~~~~~~~v---i~~~~~h~s~~~~~~~~G~~-----v~~v--~~~~~~~~~d~~~l~~~i~~-~~~~v 206 (429)
..+ + ..| -.|+..|.+....-....+. .... .+++.+|-+|.|.||+.... +|++|
T Consensus 127 l~P--------h-----~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~frPk~i 193 (477)
T KOG2467|consen 127 LKP--------H-----ERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATLFRPKLI 193 (477)
T ss_pred cCC--------C-----CeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCCCCCceehHHHHHHHHhcCCcEE
Confidence 652 1 233 35777776533222211111 1112 34666789999999987655 66654
Q ss_pred EEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccc-cccCCCCccccCCCCeeEEEEcCcccCCCCCCe
Q 014163 207 AAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIA-PFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGV 285 (429)
Q Consensus 207 ~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~-~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~ 285 (429)
+ .|.+.....-|.+++.+||.+. |+++.+|.||-.++. .-..+. .++.+|+++...||.+-+|.|
T Consensus 194 i--aG~SaY~R~~DYaR~R~Iad~~------gA~Lm~DMAHISgLVAA~vips-----PFey~DiVTTTTHKsLRGPRg- 259 (477)
T KOG2467|consen 194 I--AGTSAYSRLIDYARFRKIADKV------GAYLMADMAHISGLVAAGVIPS-----PFEYCDIVTTTTHKSLRGPRG- 259 (477)
T ss_pred E--eccccchhhccHHHHHHHHHhc------CceeehhhhhHHHHHhcccCCC-----cccccceeeccccccccCCcc-
Confidence 3 4555556666899999999999 999999999954332 111111 235799999999999988876
Q ss_pred EEEEEeCCCCccc-ccccccCCCCC----CCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHh
Q 014163 286 GWVVWRTKDDLPD-ELVFHINYLGS----DQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEK 360 (429)
Q Consensus 286 g~l~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~ 360 (429)
|++.+|+.-.-.. .......|-.. ....+.++|.+.-..+.++..+|+.-....+++..++..++++.|.+.|.+
T Consensus 260 ~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~ 339 (477)
T KOG2467|consen 260 AMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALIS 339 (477)
T ss_pred eeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5666665311111 00000111100 011234566665567888888998888788999999999999999999999
Q ss_pred CCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecc
Q 014163 361 TGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQ 408 (429)
Q Consensus 361 ~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~ 408 (429)
.+ ++++....+.+++.+.+.+. +++...+-+.|. .-+|.++.
T Consensus 340 ~G-y~lvtgGTDnHlvLvDLr~~-G~dGarvE~vle----~~~I~~NK 381 (477)
T KOG2467|consen 340 RG-YKLVTGGTDNHLVLVDLRPK-GVDGARVEKVLE----LCHIALNK 381 (477)
T ss_pred cC-ceEecCCccceEEEEecccc-CCchHHHHHHHH----HhhhhhcC
Confidence 98 89987655788999998865 567666655555 55666544
No 288
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.60 E-value=1.6e-13 Score=131.22 Aligned_cols=235 Identities=19% Similarity=0.100 Sum_probs=167.1
Q ss_pred cChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchH--
Q 014163 89 EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC-- 166 (429)
Q Consensus 89 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s-- 166 (429)
..|....+|+. +++|-|.+. +..+++|..|+..++.++... ++.|++++..|..
T Consensus 61 ~nPT~~~lE~~----~a~LEg~~~-------~~afsSGmaAI~~~~l~ll~~-------------GD~vl~~~~~YG~t~ 116 (396)
T COG0626 61 GNPTRDALEEA----LAELEGGED-------AFAFSSGMAAISTALLALLKA-------------GDHVLLPDDLYGGTY 116 (396)
T ss_pred CCccHHHHHHH----HHHhhCCCc-------EEEecCcHHHHHHHHHHhcCC-------------CCEEEecCCccchHH
Confidence 34566666654 788777764 888899999999888887651 3788888887664
Q ss_pred --HHHHHHhcCceeEEEeccCCccccCHHHHHHHhh-hCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEe
Q 014163 167 --WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVD-ENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (429)
Q Consensus 167 --~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~-~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~v 243 (429)
+.+..+..|+++.+++. .|.+++++++. ++|++|++-.|+||+-.+.|+.+|+++|+++ |+.++|
T Consensus 117 ~~~~~~l~~~gi~~~~~d~------~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~------g~~vvV 184 (396)
T COG0626 117 RLFEKILQKFGVEVTFVDP------GDDEALEAAIKEPNTKLVFLETPSNPLLEVPDIPAIARLAKAY------GALVVV 184 (396)
T ss_pred HHHHHHHHhcCeEEEEECC------CChHHHHHHhcccCceEEEEeCCCCcccccccHHHHHHHHHhc------CCEEEE
Confidence 34445567888887763 24456677777 5999999999999999999999999999999 999999
Q ss_pred ecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCe--EEEEEeCCCCcccccc-cccCCCCCCCCCceeccCC
Q 014163 244 DAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGV--GWVVWRTKDDLPDELV-FHINYLGSDQPTFTLNFSK 320 (429)
Q Consensus 244 D~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~--g~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~tr 320 (429)
|..++.... ... +. .++|.+.-|..|++.+...+ |+++.++ +.+...+. ....+++. -
T Consensus 185 DNTfatP~~---q~P--L~---~GaDIVvhSaTKyl~GHsDvl~G~v~~~~-~~~~~~~~~~~~~~~G~----------~ 245 (396)
T COG0626 185 DNTFATPVL---QRP--LE---LGADIVVHSATKYLGGHSDVLGGVVLTPN-EELYELLFFAQRANTGA----------V 245 (396)
T ss_pred ECCcccccc---cCh--hh---cCCCEEEEeccccccCCcceeeeEEecCh-HHHHHHHHHHHHhhcCC----------C
Confidence 999986432 211 12 26999999999999998875 5444333 33322211 11111221 1
Q ss_pred chhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC----------------CceEEEEEecC
Q 014163 321 GSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV----------------GVPLVAFSLKD 382 (429)
Q Consensus 321 ~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~----------------~~~~v~f~~~~ 382 (429)
......|..++ |...+..+++++.+++..+.++|++.|.++-+..|. ..++++|.+++
T Consensus 246 --l~p~dA~l~lR--GlkTL~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~ 319 (396)
T COG0626 246 --LSPFDAWLLLR--GLRTLALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKN 319 (396)
T ss_pred --CCHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCC
Confidence 23334565554 446678889999999999999999999887544331 35799999975
No 289
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.59 E-value=1.7e-12 Score=127.14 Aligned_cols=297 Identities=13% Similarity=0.036 Sum_probs=169.1
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
..+|.+.+++.+.+++.... ......+++.++.+++++..+.+ ...++++|++|+..+++.++..
T Consensus 45 ~~~p~v~~a~~~~~~~~~~~--~~~~~~~~~~~la~~l~~~~~~~-------~~~~~~sG~~a~~~A~~~a~~~------ 109 (377)
T PRK02936 45 HCHPTVTKAVQEQLDDIWHV--SNLFTNSLQEEVASLLAENSAGD-------LVFFCNSGAEANEAALKLARKH------ 109 (377)
T ss_pred CCCHHHHHHHHHHHHhcccc--ccccCCHHHHHHHHHHHhcCCCC-------EEEEeCCcHHHHHHHHHHHHHh------
Confidence 45677888888887653221 12233567778778888776643 2889999999999999977542
Q ss_pred hcCCCCCCcEEEEcCC-CchHHHHHHHhcCceeE---EEeccCCc-c--ccCHHHHHHHhhhCCeEEEEeeCCCccccc-
Q 014163 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFEVELK---EVKLEEGY-Y--VMNPVKAVELVDENTICVAAILGSTLTGEF- 218 (429)
Q Consensus 147 ~~g~~~~~~~vi~~~~-~h~s~~~~~~~~G~~v~---~v~~~~~~-~--~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~- 218 (429)
. ++..|+..+. .|.+........|.... ..|..++. . .-|++++++.+++++++|++....+..|..
T Consensus 110 -~----g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ii~e~i~~~~G~~~ 184 (377)
T PRK02936 110 -T----GKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEEVAAVMLEVVQGEGGVIP 184 (377)
T ss_pred -c----CCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccCCeEEEEEecccCCCCCcc
Confidence 1 1245666554 55444333333332110 11111110 0 127899999998888888888888777765
Q ss_pred ---cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc-ccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCC
Q 014163 219 ---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (429)
Q Consensus 219 ---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~ 294 (429)
+.+++|.++|++| ++++++|++|.++.. ....... .+++ ..|.++ ..|.+.+++.+|+++.++ +
T Consensus 185 ~~~~~l~~l~~l~~~~------~~~lI~DEv~~g~g~--~g~~~~~~~~~~-~~di~t--~sK~l~~G~~ig~v~~~~-~ 252 (377)
T PRK02936 185 ADPAFLQEVQTLCKKF------GALLIIDEVQTGIGR--TGTLFAYEQFGL-DPDIVT--VAKGLGNGIPVGAMIGKK-E 252 (377)
T ss_pred CCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--CchhhHHHhhCC-CCcEEE--EcccccCCCccEEEEEcH-H
Confidence 3399999999999 999999999976321 1100000 1111 245543 467776777789887643 2
Q ss_pred CcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHh----CCCeEEeeCC
Q 014163 295 DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEK----TGRFEILSKD 370 (429)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~ 370 (429)
+.+.+.. .....++ +.+.....+..++++.+. .++.+++..++.+++++.|++ .+.+..+..
T Consensus 253 -~~~~~~~-------~~~~~t~--~~~~~~~aaa~a~l~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~- 318 (377)
T PRK02936 253 -LGTAFGP-------GSHGSTF--GGNPLAMAAAKEVLQVIK---QPSFLEEVQEKGEYFLQKLQEELEHLECVKNIRG- 318 (377)
T ss_pred -HHhhccC-------CCCCCCC--CCCHHHHHHHHHHHHHHH---hccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEee-
Confidence 2222110 0001111 111233344444554432 134556666777777777765 232222211
Q ss_pred CCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEe
Q 014163 371 VGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVIS 424 (429)
Q Consensus 371 ~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~ 424 (429)
...++.+.+.. +...+.+.|. ++|+.+.. .+...+|++.
T Consensus 319 -~g~~~~i~~~~----~~~~~~~~l~----~~gv~v~~------~g~~~lRi~p 357 (377)
T PRK02936 319 -KGLMIGIECTE----EVAPVIEQLR----EEGLLVLS------AGPNVIRLLP 357 (377)
T ss_pred -cceEEEEEecc----hHHHHHHHHH----HCCeEEec------CCCCEEEEEC
Confidence 23455555532 1345555555 89988753 2345799985
No 290
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.59 E-value=1.1e-12 Score=129.40 Aligned_cols=305 Identities=14% Similarity=0.035 Sum_probs=173.1
Q ss_pred ChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHh
Q 014163 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (429)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~ 147 (429)
.+|.+.+++.+.++.-... .. ........++.+.+++++|.+. ..++++|++|+..++..++.....+
T Consensus 54 ~~p~v~~a~~~~~~~~~~~-~~-~~~~~~~~~l~~~l~~~~~~~~-------~~~~~SGs~A~e~ai~~a~~~~~~~--- 121 (401)
T TIGR01885 54 CHPKIVKALTEQAQKLTLS-SR-AFYNDVFGEFAEYVTKLFGYDK-------VLPMNTGAEAVETAIKLARKWGYKV--- 121 (401)
T ss_pred CCHHHHHHHHHHHHhcccc-cc-ccCCHHHHHHHHHHHhhcCCCE-------EEEeCccHHHHHHHHHHHHHHhhhh---
Confidence 3688888887776542211 11 0122333455566888887643 7899999999999999987642111
Q ss_pred cCCCCCCcEEEEcCCC-chHHHHHHHhcCc------------eeEEEeccCCccccCHHHHHHHhhh---CCeEEEEeeC
Q 014163 148 QGKPYDKPNIVTGANV-QVCWEKFARYFEV------------ELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILG 211 (429)
Q Consensus 148 ~g~~~~~~~vi~~~~~-h~s~~~~~~~~G~------------~v~~v~~~~~~~~~d~~~l~~~i~~---~~~~v~~~~~ 211 (429)
.|...++..|+..... |.+...+....|- ++..+| .-|+++|+++++. +..+|++...
T Consensus 122 ~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~le~~l~~~~~~~~avi~E~v 195 (401)
T TIGR01885 122 KGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIP------YNNLEALEEALEDHGPNVCAFIVEPI 195 (401)
T ss_pred cCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeC------CCCHHHHHHHHHhcCCCEEEEEEeCc
Confidence 1211124567666655 4443333333221 112221 1278999998863 4566777777
Q ss_pred CCccccccC----hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCC-CCeE
Q 014163 212 STLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY-AGVG 286 (429)
Q Consensus 212 ~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p-~g~g 286 (429)
.+++|.+.| +++|.++|++| ++++++|++|.++.. ....+.....-...|.++++ |.+.++ +.+|
T Consensus 196 ~~~~G~~~~~~~~l~~l~~l~~~~------~~lli~DEv~~g~g~--~G~~~~~~~~~~~~di~~~g--K~l~~g~~~ig 265 (401)
T TIGR01885 196 QGEAGVVVPDDGYLKKVRELCTKH------NVLLIADEIQTGLGR--TGKLLCVDHENVKPDIVLLG--KALSGGVYPVS 265 (401)
T ss_pred cCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc--cchhhHHhhcCCCCCEEEee--ccccCCCCCcE
Confidence 778898876 99999999999 999999999865321 11110111111236777765 765544 5778
Q ss_pred EEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEE
Q 014163 287 WVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEI 366 (429)
Q Consensus 287 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~ 366 (429)
+++.++ +.. +.+.. ... ..++.+.+ ....+..++++.+..+. ..++..++++++.+.|++++ ..+
T Consensus 266 ~v~~~~-~i~-~~~~~--~~~-----~~t~~~~p--~~~~aa~a~L~~i~~~~---l~~~~~~~~~~~~~~L~~l~-~~~ 330 (401)
T TIGR01885 266 AVLADD-DVM-LTIKP--GEH-----GSTYGGNP--LACAVAVAALEVLEEEK---LAENAEKLGEIFRDQLKKLP-KPI 330 (401)
T ss_pred EEEEcH-HHH-hhccC--CCC-----CCCCCCCH--HHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHhcc-CCc
Confidence 877643 222 22111 010 11111222 34444556666654433 44667778999999999885 233
Q ss_pred eeC-CCCceEEEEEecCCC-CCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEec
Q 014163 367 LSK-DVGVPLVAFSLKDSS-AHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 367 ~~~-~~~~~~v~f~~~~~~-~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
+.. .....++.+.+..+. ..+..++.+.|. ++|+.+... +...+|++.+
T Consensus 331 ~~~~~g~g~~~~i~~~~~~~~~~~~~l~~~l~----~~Gv~v~~~------~~~~lRi~p~ 381 (401)
T TIGR01885 331 ITEVRGRGLLNAIVIDESKTGRTAWDLCLKLK----EKGLLAKPT------HGNIIRLAPP 381 (401)
T ss_pred eeEEeecCeeEEEEeccCcchhHHHHHHHHHH----hCCEEEEec------CCCEEEEeCC
Confidence 221 113445555553221 123455566665 999987531 2356999864
No 291
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.56 E-value=1.4e-12 Score=121.92 Aligned_cols=304 Identities=13% Similarity=0.036 Sum_probs=193.3
Q ss_pred CCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCch
Q 014163 86 DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQV 165 (429)
Q Consensus 86 ~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~ 165 (429)
+|..+.+..+|...+.+.....+..+.... ....+|+|.|.++..+++.++++ ++.|++...++.
T Consensus 95 QYg~s~G~peLl~fik~h~~~~ih~p~~~~--wdiiit~G~t~~l~~~l~~~~N~-------------gd~vlie~~ty~ 159 (472)
T KOG0634|consen 95 QYGQSSGIPELLLFIKDHNRPTIHAPPYKN--WDIIITNGNTDGLFKVLRTLINR-------------GDHVLIEEYTYP 159 (472)
T ss_pred ccccccCcHHHHHHHHHhccccccCCCCCC--ceEEEecCCchHHHHHHHHhhcC-------------CCceEEecccch
Confidence 455666777777776665554455554221 34789999999999999999984 368999999999
Q ss_pred HHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhC---------CeE-EEEeeCCCccccccC---hHHHHHHHHHhh
Q 014163 166 CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDEN---------TIC-VAAILGSTLTGEFED---VKLLHDLLTKKN 232 (429)
Q Consensus 166 s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~---------~~~-v~~~~~~~~tG~~~~---l~~I~~la~~~~ 232 (429)
+-...++.+|++++.|+.|++ .+++|.|++.+... +.+ -.+-.+.||||..-. -++|.++||+|
T Consensus 160 ~AL~s~~a~gv~~ipv~md~~--Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKy- 236 (472)
T KOG0634|consen 160 SALQSMEALGVKIIPVKMDQD--GIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKY- 236 (472)
T ss_pred HHHHhccccCceEEeccccCC--CCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHc-
Confidence 988888999988777777664 49999999998741 322 235566799998744 46999999999
Q ss_pred hccCCCccEEeecccccccccccCCC-----Ccc--------------ccC----CCCeeEEEEcCcccCCCCCCeEEEE
Q 014163 233 EETGWDTPIHVDAASGGFIAPFLYPD-----LEW--------------DFR----LPLVKSINVSGHKYGLVYAGVGWVV 289 (429)
Q Consensus 233 ~~~~~~~~l~vD~a~~~~~~~~~~~~-----~~~--------------~~~----~~~~d~~~~s~hK~~~~p~g~g~l~ 289 (429)
+++++.|..|...-..-..+. ... ++. ..+.|++ .|.+.++.+.||+-
T Consensus 237 -----DfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSF----SKiiaPGlRlG~it 307 (472)
T KOG0634|consen 237 -----DFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSF----SKIIAPGLRLGWIT 307 (472)
T ss_pred -----CEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccch----hhhhcCcceeEEee
Confidence 999999999964221100010 000 111 1123444 49898999999986
Q ss_pred EeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHH----HHHHHHHHHHHh-CCCe
Q 014163 290 WRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCM----GNARALREGLEK-TGRF 364 (429)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~----~~~~~l~~~L~~-~~~~ 364 (429)
..+ ..+.+.+ +.... .. -++++....-+++.++..|++|+.+.+.+.+ .++..+..+|.+ +|.-
T Consensus 308 ~~~-~~l~ril----~~ae~-----~t-~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~ 376 (472)
T KOG0634|consen 308 GNS-LFLKRIL----DLAEV-----AT-SGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKS 376 (472)
T ss_pred cCH-HHHHHHh----hhcce-----ee-cCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 533 1221111 11111 01 1133445555778889999988877777665 477888888875 4543
Q ss_pred -EEeeCCCCceEEEEEecC---CCCCCHHHHHHHHHHHHhccCceeccc--CC--CCCC-CceEEEEEeccc
Q 014163 365 -EILSKDVGVPLVAFSLKD---SSAHTVFEISEGLRKKLNRFQVVYPQK--LP--MSYP-WSTKLRVISHLR 427 (429)
Q Consensus 365 -~~~~~~~~~~~v~f~~~~---~~~~~~~~~~~~L~~~l~~~G~~~~~~--~~--~~~~-~~~~lRi~~~~~ 427 (429)
..+.+|...-++.+++.- ....+.+++.+.+...+.++|+.+... +. +... +.-++|+++..-
T Consensus 377 ~~~~~~P~aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a 448 (472)
T KOG0634|consen 377 VCEYHPPKAGMFIWVEIPYINFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFA 448 (472)
T ss_pred eeEEecCCcceEEEEEecccccccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecC
Confidence 344444333344555531 111344456666666666999887654 11 1122 234899999754
No 292
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.56 E-value=1.3e-12 Score=128.56 Aligned_cols=310 Identities=14% Similarity=-0.001 Sum_probs=171.3
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
..+|.+.+++.+.+++-...... .......++.+.|+++++.+. ..++++|++|+..+++.++.....+
T Consensus 51 h~~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~la~~L~~~~~~~~-------~~f~~SGseA~e~Alk~ar~~~~~~-- 119 (397)
T TIGR03246 51 HAHPELVKALIEQADKLWHIGNG--YTNEPVLRLAKKLVDATFADK-------VFFCNSGAEANEAALKLARRYALDK-- 119 (397)
T ss_pred CCCHHHHHHHHHHHHhcccccCc--cCCHHHHHHHHHHHhhCCCCE-------EEEeCCcHHHHHHHHHHHHHHHHhc--
Confidence 34688888888777652211111 112233455566777776532 8899999999999999987632111
Q ss_pred hcCCCCCCcEEEE-cCCCchHHHHHHHhcCceeE---EEeccCCc---cccCHHHHHHHhhhCCeEEEEeeCCCccccc-
Q 014163 147 EQGKPYDKPNIVT-GANVQVCWEKFARYFEVELK---EVKLEEGY---YVMNPVKAVELVDENTICVAAILGSTLTGEF- 218 (429)
Q Consensus 147 ~~g~~~~~~~vi~-~~~~h~s~~~~~~~~G~~v~---~v~~~~~~---~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~- 218 (429)
.+ .++..|+. ....|.+...+....|.... +-|...+- -.-|++++++++.+++.+|++....+..|.+
T Consensus 120 -~~--~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavi~Epi~~~~G~~~ 196 (397)
T TIGR03246 120 -HG--ADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYNDLAAAKALISDKTCAVIVEPIQGEGGVVP 196 (397)
T ss_pred -CC--CCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCCCHHHHHHHhccCeEEEEEecccCCCCCcC
Confidence 11 12345555 44566654444443332110 00100000 0137899999998888888887655556644
Q ss_pred ---cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCc-cccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCC
Q 014163 219 ---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (429)
Q Consensus 219 ---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~ 294 (429)
..+++|.++|++| |+++++|++|.|+.- ...-+. ..+++ ..|.+++ -|.+++++.+|+++.+++
T Consensus 197 ~~~~~l~~l~~lc~~~------g~llI~DEv~tG~Gr--~G~~~a~~~~gv-~pDi~t~--~K~lggG~pigav~~~~~- 264 (397)
T TIGR03246 197 ADPAFLKGLRELCDRH------NALLIFDEVQTGVGR--TGELYAYMHYGV-TPDILTS--AKALGGGFPIGAMLTTTE- 264 (397)
T ss_pred CCHHHHHHHHHHHHHc------CCEEEEechhhcCCc--cccchhhhhcCC-CCCEEEe--ehhhhCCcceeEEEEcHH-
Confidence 4599999999999 999999999965421 111000 11122 3676653 466666778898887542
Q ss_pred CcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCC-eEEeeCC-CC
Q 014163 295 DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGR-FEILSKD-VG 372 (429)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~~-~~ 372 (429)
+.+.+... ....++.+.+ ....+..++++.+.. ++..++.+++.+++.+.|+++.. +.++... ..
T Consensus 265 -i~~~~~~~-------~~~~t~~~~p--~~~aaa~a~l~~~~~---~~l~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~ 331 (397)
T TIGR03246 265 -IAAHLKVG-------THGTTYGGNP--LACAVAGKVLDLVNT---PELLAGVKQRHDLFVDGLEKINARYNVFSEIRGK 331 (397)
T ss_pred -HHHhccCC-------CcCCCCCCCH--HHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhcCCCeEeeecC
Confidence 22222110 0011111222 234445555655432 45678888899999999887641 2222221 12
Q ss_pred ceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEec
Q 014163 373 VPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 373 ~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
..++.+.+.+........+.+.|. ++|+.+... +...+|++.+
T Consensus 332 G~~~~i~~~~~~~~~~~~~~~~l~----~~Gv~~~~~------g~~~lR~~p~ 374 (397)
T TIGR03246 332 GLLIGAVLTEAYQGKAKQFVNAAA----EEGVIALIA------GPNVVRFAPS 374 (397)
T ss_pred ceEEEEEEcCchhhHHHHHHHHHH----HCCeEEeec------CCCEEEEeCC
Confidence 344455543211112344455555 999987531 2356998643
No 293
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.55 E-value=7.4e-13 Score=122.19 Aligned_cols=300 Identities=14% Similarity=0.096 Sum_probs=188.1
Q ss_pred ChHHHHHHHHHHcCcCCCCCc-------cChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHH
Q 014163 68 MEPECDKLVMASINKNYVDMD-------EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRK 140 (429)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~ 140 (429)
.+|.+.+++...++..+..-. .+.-...||.+ ||+|.+-+. ...| +++-.||...+..+...
T Consensus 186 ~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~e----LA~LHqK~a------ALlF-sSCfVANDstLftLak~ 254 (570)
T KOG1360|consen 186 RHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAE----LADLHQKEA------ALLF-SSCFVANDSTLFTLAKK 254 (570)
T ss_pred CChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHH----HHHHhcCcc------eeee-eeeeeccchHHHHHHHH
Confidence 458899999999987543211 22334455555 888877653 1222 23334454444444332
Q ss_pred HHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhh----CCeEEEEeeCCCccc
Q 014163 141 WQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE----NTICVAAILGSTLTG 216 (429)
Q Consensus 141 ~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~----~~~~v~~~~~~~~tG 216 (429)
+ + +-+|+-.+.-|.|...-.+..+++-.... .-|+++|+++++. .|+.|.+-...+..|
T Consensus 255 l------p-----gcei~SD~gNHASMI~GIrns~v~K~IFr------HND~~hL~~lL~~~~~svPKivAFEtVhSM~G 317 (570)
T KOG1360|consen 255 L------P-----GCEIFSDEGNHASMIQGIRNSRVPKHIFR------HNDLDHLEQLLQSSPKSVPKIVAFETVHSMDG 317 (570)
T ss_pred C------C-----CcEEeccccchHHHHHHhhhcCCcceeec------cCCHHHHHHHHHhCCCCCCceEEEeeeeccCC
Confidence 1 1 12455555568777766666554432222 2478999999885 368899999999999
Q ss_pred cccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCC----ccccCCCCeeEEEEcCcccCCCCCCeEEEEEeC
Q 014163 217 EFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL----EWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (429)
Q Consensus 217 ~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~----~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~ 292 (429)
.+.|+++|++++++| |++..+|++|+.+. +.+.- ..+--...+|.++...-|.+++- | |++...
T Consensus 318 avcpleelcDvah~y------GAiTFlDEVHAVGl---YG~rGaGvgerdGvm~kvDiIsGTLgKafGcV-G-GYIAat- 385 (570)
T KOG1360|consen 318 AVCPLEELCDVAHKY------GAITFLDEVHAVGL---YGPRGAGVGERDGVMHKVDIISGTLGKAFGCV-G-GYIAAT- 385 (570)
T ss_pred CcCCHHHHHHHHHHh------Cceeeeehhhhhcc---ccCCCCCccccCCcchhhhhcccchhhhcccc-c-ceehhh-
Confidence 999999999999999 99999999997543 22211 11112346899999988876442 1 454432
Q ss_pred CCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC
Q 014163 293 KDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-FEGYKNIMENCMGNARALREGLEKTGRFEILSKDV 371 (429)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~-~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 371 (429)
. .+.+.++ .| .+.+-+.-|.+......+..+.+.+. .+| +...+..+++..|+++.|.+.+ +.++..|
T Consensus 386 ~-~LvDmiR---Sy----AaGFIFTTSLPP~vl~GAleaVr~lk~~eg-~~lR~~hqrnv~~~kq~l~~~G-iPVi~~p- 454 (570)
T KOG1360|consen 386 R-KLVDMIR---SY----AAGFIFTTSLPPMVLAGALEAVRILKSEEG-RVLRRQHQRNVKYVKQLLMELG-IPVIPNP- 454 (570)
T ss_pred h-hHHHHHH---Hh----cCceEEecCCChHHHHhHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHHcC-CcccCCC-
Confidence 2 2222211 11 11222223333344555666666664 444 4555566778899999999987 8887554
Q ss_pred CceEEEEEecCCCCCCHHHHHHHHHHHHhccCceeccc-CCCCCCCceEEEEEe
Q 014163 372 GVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK-LPMSYPWSTKLRVIS 424 (429)
Q Consensus 372 ~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~-~~~~~~~~~~lRi~~ 424 (429)
..++-+++-++ .-..++.+.|. .+.||.+-.. +|+...|..-|||+-
T Consensus 455 -SHIiPv~vgda--~l~~~~sd~Li---~~h~iYvQaINyPTV~rG~E~LRiaP 502 (570)
T KOG1360|consen 455 -SHIIPVRVGDA--ALAKQASDILI---SKHNIYVQAINYPTVARGTERLRIAP 502 (570)
T ss_pred -cceeeeeccCH--HHHHHHHHHHH---HhcCeEEEeccCCcccccceeeecCC
Confidence 68888887542 22334444443 3678998877 999999999999975
No 294
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.55 E-value=2.9e-12 Score=126.49 Aligned_cols=303 Identities=13% Similarity=0.022 Sum_probs=166.1
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
..+|.+.+++.+.+++....... .......++.+.|+++.+.+. ..++++|++|+..+++.++.... +.
T Consensus 56 h~~p~v~~a~~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~~~~~~-------~~~~~sGseA~e~a~klar~~~~-~~- 124 (403)
T PRK05093 56 HCHPALVKALKEQGEKLWHISNV--FTNEPALRLAKKLIDATFAER-------VFFANSGAEANEAAFKLARRYAC-DR- 124 (403)
T ss_pred CCCHHHHHHHHHHHHhcCcccCc--cCCHHHHHHHHHHHhhCCCCE-------EEEeCchHHHHHHHHHHHHHHHh-hc-
Confidence 45688888888777652211110 111223355566777765532 88999999999999998865321 10
Q ss_pred hcCCCCCCcEEEE-cCCCchHHHHHHHhcC-------c-----eeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCC
Q 014163 147 EQGKPYDKPNIVT-GANVQVCWEKFARYFE-------V-----ELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGST 213 (429)
Q Consensus 147 ~~g~~~~~~~vi~-~~~~h~s~~~~~~~~G-------~-----~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~ 213 (429)
. ..++..|+. ....|.+...+....| . ++..+| .-|++.+++.+.+++++|++. |.+
T Consensus 125 -~--~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~d~~~l~~~l~~~~aaiiie-p~~ 194 (403)
T PRK05093 125 -H--GPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVP------FNDLAAVKAVIDDHTCAVVVE-PIQ 194 (403)
T ss_pred -C--CCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeC------CCCHHHHHHHhcCCeEEEEEe-ccc
Confidence 0 012334554 5456665443333221 1 111111 127899999998888887777 666
Q ss_pred ccccc-----cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc-ccCCCCeeEEEEcCcccCCCCCCeEE
Q 014163 214 LTGEF-----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHKYGLVYAGVGW 287 (429)
Q Consensus 214 ~tG~~-----~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~d~~~~s~hK~~~~p~g~g~ 287 (429)
++|.+ +.+++|.++|++| |+++++|++|.++.. ....... .+++ ..|..++ -|.+.+++++|+
T Consensus 195 ~~gg~~~~~~~~l~~l~~l~~~~------g~~lI~DEv~~g~g~--~g~~~~~~~~~~-~pdi~s~--sK~l~~G~rig~ 263 (403)
T PRK05093 195 GEGGVIPATPEFLQGLRELCDQH------NALLIFDEVQTGMGR--TGDLFAYMHYGV-TPDILTS--AKALGGGFPIGA 263 (403)
T ss_pred CCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCC--CccchhhhhcCC-CCCEEEe--cccccCCcceEE
Confidence 66544 2399999999999 999999999986321 1110110 1111 2454443 377767788999
Q ss_pred EEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEE
Q 014163 288 VVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTG-RFEI 366 (429)
Q Consensus 288 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~-~~~~ 366 (429)
++.+++ +.+.+.. ... ..++ +.. .....+..++|+.+.. .+..++..++++++.+.|++++ .+.+
T Consensus 264 vv~~~~--i~~~l~~--~~~-----~~t~-~~~-~~~~~aa~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~ 329 (403)
T PRK05093 264 MLTTAE--IASHFKV--GTH-----GSTY-GGN-PLACAVAEAVFDIINT---PEVLEGVKARRQRFVDGLQKINQKYGV 329 (403)
T ss_pred EEEcHH--HHhhcCC--CCC-----CCCC-CCC-HHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 987542 2122110 000 0111 111 1223333444544422 3455778888899999998763 1112
Q ss_pred eeCCC-CceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEec
Q 014163 367 LSKDV-GVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 367 ~~~~~-~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
+.... ...++.+.+.+....+..++...|. ++|+.+.. .+...+|++++
T Consensus 330 ~~~~~~~G~~~~~~l~~~~~~~~~~~~~~l~----~~Gv~v~~------~g~~~lRl~~~ 379 (403)
T PRK05093 330 FSEIRGMGLLIGAELKPQYKGRARDFLNAAA----EEGVMVLV------AGPDVLRFAPS 379 (403)
T ss_pred eEeEeeCceEEEEEecCcchhHHHHHHHHHH----HCCeEEec------CCCCEEEEeCC
Confidence 22221 2233444443210113445666666 89988753 23457999654
No 295
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.55 E-value=6.3e-13 Score=130.51 Aligned_cols=268 Identities=12% Similarity=0.040 Sum_probs=185.3
Q ss_pred HHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCcee
Q 014163 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVEL 178 (429)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v 178 (429)
++.+..|+.+|.+.. -.+++|.|.||...+.+... .++.|++++++|-|.....-+.|+.+
T Consensus 74 eAqe~aA~~fgAd~t------yFvvNGTS~ank~vi~a~~~-------------~GD~VLvdRN~HKSi~~glilaGa~P 134 (557)
T COG1982 74 EAQELAARVFGADHT------YFVVNGTSTANKAVINAVLT-------------PGDKVLVDRNCHKSIHHGLILAGATP 134 (557)
T ss_pred HHHHHHHHHhCCCce------EEEECCccHHHHHHHHhhcC-------------CCCEEEecCCccHHHHHHHHHcCCce
Confidence 445668999999862 56778888899888888765 24799999999999999999999999
Q ss_pred EEEeccCCc-----cccCHHHHHHHhhhCC---eEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccc
Q 014163 179 KEVKLEEGY-----YVMNPVKAVELVDENT---ICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGF 250 (429)
Q Consensus 179 ~~v~~~~~~-----~~~d~~~l~~~i~~~~---~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~ 250 (429)
+++....+. +.++.+.+++.+.+.+ ++++++.| |+-|.+.++++|.+.++++ ++|+.+|.+++..
T Consensus 135 vyl~p~~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnp-TYdGv~~n~~~i~~~~~~~------~a~v~~deah~~~ 207 (557)
T COG1982 135 VYLEPSRNPLYGIIGGIPLETFKEALLAHPDAEKLAVITNP-TYDGVCYNLRKIVELLHHY------GAWVLYDEAHPAH 207 (557)
T ss_pred EEecCCCCccccccCCCCHHHHHHHHHhChhhheeEEEecC-ccceEeecHHHHHHHHhhc------CceEEhhhcCccc
Confidence 998764321 4789999999887653 56666666 5559999999999999999 9999999999864
Q ss_pred cccccCCCCccccC-CCCeeEEEEcCcccCCCCCCeEEEEEeCC-CCcccccccccCCCCCCCCCceeccCCchhHHHHH
Q 014163 251 IAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTK-DDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQ 328 (429)
Q Consensus 251 ~~~~~~~~~~~~~~-~~~~d~~~~s~hK~~~~p~g~g~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~ 328 (429)
.. ..+... +.. ..++|.++-|.||.+.+-...+.+.+++. ..-.+.+...-..... .|++.....++
T Consensus 208 ~~--~~~~l~-~~~~~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~~r~nea~~~h~S--------TSPsY~l~ASl 276 (557)
T COG1982 208 FD--FSPMLP-ESALNGGADFVTQSTHKLLAALSQASMIHVKDGRAVNHERFNEALMMHQS--------TSPSYPLMASL 276 (557)
T ss_pred cc--ccccCc-chhhhcCceEEEechhhhhhhhhhhHHHhhCCCccCCHHHHHHHHHHHcc--------CCchHHHHHHH
Confidence 32 222222 122 24699999999999988888888887753 1111111111111111 23332333334
Q ss_pred HHHHHHcCHHH---HHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC--------------------CceEEEEEecCCCC
Q 014163 329 YYQFIRLGFEG---YKNIMENCMGNARALREGLEKTGRFEILSKDV--------------------GVPLVAFSLKDSSA 385 (429)
Q Consensus 329 ~~al~~l~~~g---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--------------------~~~~v~f~~~~~~~ 385 (429)
-.|-...+..| +++.++...+.++++++...+++.|.++.++. +..=+++..+ ..+
T Consensus 277 D~Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp-~~G 355 (557)
T COG1982 277 DVARMQEGNAGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTP-EFG 355 (557)
T ss_pred HHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEecC-CCC
Confidence 44333334333 44557888899999999999998888887652 1111233322 337
Q ss_pred CCHHHHHHHHHHHHhccCceecc
Q 014163 386 HTVFEISEGLRKKLNRFQVVYPQ 408 (429)
Q Consensus 386 ~~~~~~~~~L~~~l~~~G~~~~~ 408 (429)
+....+.+.|+ ++|++...
T Consensus 356 ipg~~v~~~L~----e~gii~e~ 374 (557)
T COG1982 356 IPGAIVAKYLR----EHGIIPEE 374 (557)
T ss_pred CcHHHHHHHHH----HcCCeeee
Confidence 88999999999 99988643
No 296
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.51 E-value=1.3e-11 Score=128.72 Aligned_cols=315 Identities=15% Similarity=0.063 Sum_probs=189.8
Q ss_pred CCCCCCCCHHHHHHHHHHhhccCCCCCccccccccCCChHH-HHHHHHH---HcCc-CCCCCccChhhHHHHHHHHHHHH
Q 014163 31 KMPDNSMPKEAAYQVINDELMLDGNPRLNLASFVTTWMEPE-CDKLVMA---SINK-NYVDMDEYPVTTELQNRCVNMIA 105 (429)
Q Consensus 31 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~---~~~~-~~~~~~~~~~~~~le~~~~~~la 105 (429)
.+|+ +.++.++++++.+...++......++.++.....|. +.+.+.+ .+.. .+.+++.+++.-+.--+...+++
T Consensus 56 ~lp~-~~sE~e~~~~~~~~a~kN~~~~~fiG~G~y~~~~P~vi~~~i~~~~~~yTaYTPYQpEisQG~Lqal~e~Qtmi~ 134 (954)
T PRK12566 56 DLPA-ALDEQAALARLRGYAEQNQVWTSLIGMGYHGTVTPTVILRNVLENPGWYTAYTPYQPEIAQGRLEALLNFQQMTI 134 (954)
T ss_pred CCCC-CCCHHHHHHHHHHHHhcCCCccccccccccCCcCcHHHHHHHHhCchhhhcCCCCCchhhhHHHHHHHHHHHHHH
Confidence 4554 578999999999887665433322455555444454 4243332 1111 23334556677777778889999
Q ss_pred HhhCCCCCCCCCCCceEeCCchH---HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHH----HHHhcCcee
Q 014163 106 HLFNTPVADDKTAVGVGTVGSSE---AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK----FARYFEVEL 178 (429)
Q Consensus 106 ~l~g~~~~~~~~~~~~~t~g~t~---a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~----~~~~~G~~v 178 (429)
+|+|++.. +...-.++|. |+.++.+..+. ++.+|++++..|+.+.. .++..|+++
T Consensus 135 ~LtGm~va-----NASl~D~atA~aEA~~ma~~~~~~-------------k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i 196 (954)
T PRK12566 135 DLTGLDLA-----NASLLDEATAAAEAMALAKRVAKS-------------KSNRFFVDEHCHPQTLSVLRTRAEGFGFEL 196 (954)
T ss_pred HHhCchhh-----hhhhccchhHHHHHHHHHHHHhhc-------------CCCEEEECCCCCHHHHHHHHHhhhcCCcEE
Confidence 99999852 2233345544 33333322110 13579999999986544 445567666
Q ss_pred EEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCC
Q 014163 179 KEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD 258 (429)
Q Consensus 179 ~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~ 258 (429)
+. +++++.+.+++..|++.+|++ .|.+.|+++|++++|+. |..++ +++--.. +..+.+
T Consensus 197 ~~------------~~~~~~~~~~~~~v~vq~P~~-~G~i~d~~~i~~~~h~~------gal~~-~~~d~la-L~ll~~- 254 (954)
T PRK12566 197 VV------------DAVDNLAAHAVFGALLQYPDT-HGEIRDLRPLIDQLHGQ------QALAC-VAADLLS-LLVLTP- 254 (954)
T ss_pred EE------------cchhhcCCCCEEEEEEECCCC-ceEEccHHHHHHHHHHc------CCEEE-EEeCHHH-HhCCCC-
Confidence 53 234455666778888888865 49999999999999999 88755 4444211 111222
Q ss_pred CccccCCCCeeEEEEcCcccC----CCCCCeEEEEEeCCCCcccccccccCCCCC------------------------C
Q 014163 259 LEWDFRLPLVKSINVSGHKYG----LVYAGVGWVVWRTKDDLPDELVFHINYLGS------------------------D 310 (429)
Q Consensus 259 ~~~~~~~~~~d~~~~s~hK~~----~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~------------------------~ 310 (429)
+ +..++|.++.+++-++ ++++..|++.++++ +.+.+ +.-+-+ .
T Consensus 255 -P---ge~GADI~vG~~Q~fGvp~~~GGP~ag~~a~~~~--~~R~~---PGRivG~s~D~~G~~a~~l~LqtREQHIRRe 325 (954)
T PRK12566 255 -P---GELGADVVLGSTQRFGVPMGYGGPHAAYFACRDD--YKRAM---PGRIIGVSRDARGNTALRMALQTREQHIRRE 325 (954)
T ss_pred -h---hhcCCcEEeeCCCcCCCCCCCCCCCeeeeeehHH--HHhhC---CCCccceeecCCCCeeeehhhhHHHHHhhhc
Confidence 1 2247999977777653 33455688887653 22221 111111 0
Q ss_pred CCCceeccCCchhHHHHHHHHH--HHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCCCCH
Q 014163 311 QPTFTLNFSKGSSQIIAQYYQF--IRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTV 388 (429)
Q Consensus 311 ~~~~~~~~tr~~~~~~~~~~al--~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~ 388 (429)
..+..+ ||.. ..++..+++ .++|.+|++++.++...++.+|.+.|++. ++++..++ .+..+.+++. . +.
T Consensus 326 KAtSNI-CT~q--aL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~-g~~~~~~~-fF~~~~v~~~-~---~~ 396 (954)
T PRK12566 326 KANSNI-CTAQ--VLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAK-GIKRLNRH-FFDTLTLEVG-G---AQ 396 (954)
T ss_pred cccchh-hHHH--HHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc-CCccccCC-ccceEEEEcc-C---CH
Confidence 011111 3332 223333333 45699999999999999999999999995 59887664 5677777762 1 34
Q ss_pred HHHHHHHHHHHhccCceecc
Q 014163 389 FEISEGLRKKLNRFQVVYPQ 408 (429)
Q Consensus 389 ~~~~~~L~~~l~~~G~~~~~ 408 (429)
.++.++.. ++|+-++.
T Consensus 397 ~~~~~~a~----~~~~n~r~ 412 (954)
T PRK12566 397 AAIIESAE----AARINLRI 412 (954)
T ss_pred HHHHHHHH----HCCCeeEE
Confidence 45555555 78888774
No 297
>PLN02624 ornithine-delta-aminotransferase
Probab=99.51 E-value=2.4e-11 Score=121.94 Aligned_cols=303 Identities=13% Similarity=0.028 Sum_probs=164.4
Q ss_pred ChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHh
Q 014163 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (429)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~ 147 (429)
.+|.+.+++.+.+++...... ....+...++.+.+++++|.+. ..++++|++|+..|++.++.....+
T Consensus 92 ~~p~v~~ai~~ql~~~~~~~~--~~~~~~~~~la~~L~~~~~~~~-------~~f~~SGseA~e~AlklAr~~~~~~--- 159 (474)
T PLN02624 92 CHPKIIKALTEQAEKLTLSSR--AFYNDKFPEFAEYLTSMFGYDM-------VLPMNTGAEGVETAIKLARKWGYEK--- 159 (474)
T ss_pred CCHHHHHHHHHHHHhcCCccc--ccCCHHHHHHHHHHHhhcCCCe-------EEEeCChHHHHHHHHHHHHHHHHhh---
Confidence 468888888877765322111 1112333355566777777643 8899999999999999887632111
Q ss_pred cCCCCCCcEEEEcCC-CchHHHHHHHhcCc------------eeEEEeccCCccccCHHHHHHHhhh---CCeEEEEeeC
Q 014163 148 QGKPYDKPNIVTGAN-VQVCWEKFARYFEV------------ELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILG 211 (429)
Q Consensus 148 ~g~~~~~~~vi~~~~-~h~s~~~~~~~~G~------------~v~~v~~~~~~~~~d~~~l~~~i~~---~~~~v~~~~~ 211 (429)
+|.+.++..|+.... .|....-+....|- ++..+|. -|++.|++.++. ++.+|++..+
T Consensus 160 ~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~------~d~~~l~~~l~~~~~~iaaiiiEpv 233 (474)
T PLN02624 160 KGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDF------GDLDALEKIFEEDGDRIAAFLFEPI 233 (474)
T ss_pred cCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCC------CCHHHHHHHHHhCCCCEEEEEECCc
Confidence 111112234555444 44332222222110 1122221 268899998863 4678888888
Q ss_pred CCccccccC----hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCC-CCeE
Q 014163 212 STLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY-AGVG 286 (429)
Q Consensus 212 ~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p-~g~g 286 (429)
.+++|.+.| +++|.++|++| |+++++|++|.++.. ....+..+..-...|.++++ |.++++ +.+|
T Consensus 234 ~~~~G~v~p~~~~L~~l~~lc~~~------gillI~DEv~tG~Gr--tG~~~a~~~~~i~pDiv~ls--K~lggG~~pig 303 (474)
T PLN02624 234 QGEAGVVIPPDGYLKAVRELCSKH------NVLMIADEIQTGLAR--TGKMLACDWEEVRPDVVILG--KALGGGVIPVS 303 (474)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCcCc--CcchhhHHhcCCCCCEEEec--ccccCCCCcce
Confidence 999999876 99999999999 999999999986321 11111111111236777764 655544 6788
Q ss_pred EEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhC----C
Q 014163 287 WVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKT----G 362 (429)
Q Consensus 287 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~----~ 362 (429)
+++.++ +.. ..+. .... ..++ +.. .....+..++++.+..++ ..++..++.+++++.|.++ +
T Consensus 304 av~~~~-~i~-~~~~--~~~~-----~~T~-~g~-pl~~aaa~aaLe~l~~~~---l~~~~~~~~~~l~~~L~~l~~~~~ 369 (474)
T PLN02624 304 AVLADK-DVM-LCIK--PGEH-----GSTF-GGN-PLASAVAMAALQVVQDEK---LAERSAKLGQELRDQLQKIQKQFP 369 (474)
T ss_pred eeeecH-HHH-hHhc--cCCc-----CCCC-CCC-HHHHHHHHHHHHHHHhch---HHHHHHHHHHHHHHHHHHHHHhCC
Confidence 887653 221 1111 0000 0111 111 134444555565554433 3445556666666666553 3
Q ss_pred C-eEEeeCCCCceEEEEEecCCC--CCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEe
Q 014163 363 R-FEILSKDVGVPLVAFSLKDSS--AHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVIS 424 (429)
Q Consensus 363 ~-~~~~~~~~~~~~v~f~~~~~~--~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~ 424 (429)
. +.-+. + ...++.+.+..+. .....++.+.|. ++|+.+.. .+...||++.
T Consensus 370 ~~i~~vr-g-~G~~~~i~l~~~~~~~~~a~~~~~~L~----e~GV~v~p------~~~~~lR~~p 422 (474)
T PLN02624 370 KLIKEVR-G-RGLLNAVVLNSPKLGPVSAYDVCLKLK----ERGLLAKP------THDTIIRLAP 422 (474)
T ss_pred CceEEEE-e-eEEEEEEEecCCCcChHHHHHHHHHHH----hCCeEEec------CCCCEEEEEC
Confidence 1 22121 1 3344555553221 112334555555 99988753 1345699985
No 298
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.49 E-value=1.5e-11 Score=109.76 Aligned_cols=346 Identities=16% Similarity=0.143 Sum_probs=190.9
Q ss_pred HHHHHHHHHHhhccCCCCCccccccccCCChHHH----HHHHHHHcCc-----CCCCCccChhhHHHHHHHHHHHHHhhC
Q 014163 39 KEAAYQVINDELMLDGNPRLNLASFVTTWMEPEC----DKLVMASINK-----NYVDMDEYPVTTELQNRCVNMIAHLFN 109 (429)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~-----~~~~~~~~~~~~~le~~~~~~la~l~g 109 (429)
...+++++.+-++..+ .+.++++.|.. .|++ .+...+.+.. +..+|+..++...+-+.+...+.+-+|
T Consensus 16 i~~lMdDl~d~Lrt~g--~imLggGNPa~-iPem~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~yg 92 (417)
T COG3977 16 ITQLMDDLNDGLRTPG--AIMLGGGNPAR-IPEMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYG 92 (417)
T ss_pred HHHHHHHHHhhccCCC--ceeeCCCCccc-ChhHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhC
Confidence 4455666555544332 34577777743 3443 3444444433 345677888889999999999999999
Q ss_pred CCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEc-CCCchHHHHHHHhcCceeEE---Eecc-
Q 014163 110 TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTG-ANVQVCWEKFARYFEVELKE---VKLE- 184 (429)
Q Consensus 110 ~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~-~~~h~s~~~~~~~~G~~v~~---v~~~- 184 (429)
+.-... .+..|+|+..+.++.......+. ..| ....|+.| .+.|..|..++---.+=|.. +...
T Consensus 93 wnit~~---NIalTnGSQs~fFYlfNlF~G~~-----sdG---~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~iel~~ 161 (417)
T COG3977 93 WNITAQ---NIALTNGSQSAFFYLFNLFAGRR-----SDG---TEKKILLPLAPEYIGYADAGLEEDLFVSAKPNIELLP 161 (417)
T ss_pred CCCccc---eeeecCCccchHHHHHHHhcCcc-----CCC---cceeEeeccChhhccccccccCccceeeccCCccccc
Confidence 986432 37889999888888777654321 011 11245543 33444444332111111111 1111
Q ss_pred CC--ccccCHHHHHHHhhhCCeEEEEeeCCCccccc---cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCC
Q 014163 185 EG--YYVMNPVKAVELVDENTICVAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL 259 (429)
Q Consensus 185 ~~--~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~ 259 (429)
.+ .+++|.++|. +.+.+-+|+++-|+||||.+ +.+.+|.++|++| |+++++|.|||..+-...-.+.
T Consensus 162 ~g~FKY~vDF~~l~--i~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~------giPliIDnAYg~PFP~iifsd~ 233 (417)
T COG3977 162 AGQFKYHVDFEHLH--IGESTGAICVSRPTNPTGNVLTDEELAKLDALARQH------GIPLIIDNAYGVPFPGIIFSDA 233 (417)
T ss_pred ccceeeccCHHHcc--cccccceEEecCCCCCCCCcccHHHHHHHHHHhhhc------CCcEEEecccCCCCCceecccc
Confidence 11 2577877775 56788999999999999998 5688999999999 9999999999853211111111
Q ss_pred ccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHH----HHHHc
Q 014163 260 EWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYY----QFIRL 335 (429)
Q Consensus 260 ~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~----al~~l 335 (429)
...+ - .=-..++|..|.+.++.+||+++... +.. ..+.. .....++.-+|-+..+ ++-+ .+..+
T Consensus 234 ~~~w-~-~NiilC~SLSK~GLPG~R~GIiIane-~vi-qaitn-------mn~iisLap~~~G~Ai-a~~mie~gdl~rl 301 (417)
T COG3977 234 TPLW-N-ENIILCMSLSKLGLPGSRCGIIIANE-KVI-QAITN-------MNGIISLAPGRMGPAI-AAEMIESGDLLRL 301 (417)
T ss_pred cccC-C-CCEEEEeehhhcCCCCcceeEEEccH-HHH-HHHHh-------ccceeeecCCCccHHH-HHHHhhcchHHHH
Confidence 1011 1 13456778889999999999987643 222 11111 1111122223322222 1111 12222
Q ss_pred CHHHHHHHH-HHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceeccc--C-C
Q 014163 336 GFEGYKNIM-ENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK--L-P 411 (429)
Q Consensus 336 ~~~g~~~~~-~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~--~-~ 411 (429)
.++-++-.. ++....-..++..|-+.+ +.+ .++ ...++.|.-...-+++..++.++|+ .+|+.+.+. + +
T Consensus 302 seqVIrPFY~~~~q~~~~~l~~~lp~~~-~~i-Hkp-EGAIFlWLWf~dLPItt~~LYq~LK----a~Gvl~VPG~~FFp 374 (417)
T COG3977 302 SEQVIRPFYRNRVQTTIAILRRYLPEYR-CLI-HKP-EGAIFLWLWFKDLPITTEELYQRLK----ARGVLMVPGHYFFP 374 (417)
T ss_pred HHHhhhHHHHHHHHHHHHHHHHhcCccc-eee-ecC-CcceeehhhhccCCCCHHHHHHHHH----hCeEEEecccccCC
Confidence 222222211 222223333444444433 333 344 4556655432223577788888887 999888665 2 2
Q ss_pred ---CCCCC-ceEEEEEec
Q 014163 412 ---MSYPW-STKLRVISH 425 (429)
Q Consensus 412 ---~~~~~-~~~lRi~~~ 425 (429)
-+|+| +.++|+++.
T Consensus 375 Gl~~ewpH~hqC~Rmn~~ 392 (417)
T COG3977 375 GLDKEWPHTHQCMRMNYV 392 (417)
T ss_pred CCCCCCCCccceEEEecC
Confidence 22343 357998763
No 299
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.47 E-value=1.1e-11 Score=122.55 Aligned_cols=308 Identities=12% Similarity=-0.040 Sum_probs=168.5
Q ss_pred ChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHh
Q 014163 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (429)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~ 147 (429)
.+|.+.+++.+.+++-...... ...+...++.+.++++++.+. ..++++|+||+..+++.++.... .+
T Consensus 56 ~~p~v~~A~~~~~~~~~~~~~~--~~~~~~~~la~~l~~~~~~~~-------v~~~~sGseA~e~Alk~ar~~~~-~~-- 123 (406)
T PRK12381 56 AHPALREALNEQASKFWHTGNG--YTNEPVLRLAKKLIDATFADR-------VFFCNSGAEANEAALKLARKYAH-DR-- 123 (406)
T ss_pred CCHHHHHHHHHHHhhcccccCc--cCCHHHHHHHHHHHhhCCCCe-------EEEcCCcHHHHHHHHHHHHHHHh-hc--
Confidence 4688888888777642111111 112223355666777766532 89999999999999999875321 10
Q ss_pred cCCCCCCcEEEEcC-CCchHHHHHHHhcCceeE---EEeccCC---ccccCHHHHHHHhhhCCeEEEEeeCCCcccc---
Q 014163 148 QGKPYDKPNIVTGA-NVQVCWEKFARYFEVELK---EVKLEEG---YYVMNPVKAVELVDENTICVAAILGSTLTGE--- 217 (429)
Q Consensus 148 ~g~~~~~~~vi~~~-~~h~s~~~~~~~~G~~v~---~v~~~~~---~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~--- 217 (429)
+. .++..|+..+ ..|.....+....|.... +.|+.++ ....|++++++.+++++.+|++ -|.+++|.
T Consensus 124 -~~-~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavii-EPv~~~gg~~~ 200 (406)
T PRK12381 124 -YG-SHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQTCAVIV-EPIQGEGGVIP 200 (406)
T ss_pred -CC-CCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccCCeeEEEE-eCCcCCCCCcC
Confidence 10 1234565544 455544434333332100 0111110 0124789999999877777766 47777765
Q ss_pred --ccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc-ccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCC
Q 014163 218 --FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKD 294 (429)
Q Consensus 218 --~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~ 294 (429)
.+.+++|.++|++| |+++++|++|.++.. ...-+.. .+++ ..|.+++ -|.+.+++.+|+++.+++
T Consensus 201 ~~~~~l~~l~~l~~~~------~~llI~DEv~tG~gr--~G~~~~~~~~~v-~pDi~t~--sK~l~gG~~ig~~~~~~~- 268 (406)
T PRK12381 201 ADKAFLQGLRELCDRH------NALLIFDEVQTGVGR--TGELYAYMHYGV-TPDVLTT--AKALGGGFPIGAMLTTEK- 268 (406)
T ss_pred CCHHHHHHHHHHHHHc------CCEEEEcchhhCCCC--CcchhhhHhhCC-CCCEEEe--hhhhhCCCceEEEEEcHH-
Confidence 36689999999999 999999999965421 1111110 1122 2565443 477777788999887542
Q ss_pred CcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEeeCCC-C
Q 014163 295 DLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTG-RFEILSKDV-G 372 (429)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~-~ 372 (429)
+.+.+.. .. ...++.+++ ....+..++++.+.. .+..++..++.+++.+.|+++. .+.++.... .
T Consensus 269 -~~~~~~~---~~----~~~t~~~~p--l~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~ 335 (406)
T PRK12381 269 -CASVMTV---GT----HGTTYGGNP--LASAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTINARYGLFSEIRGL 335 (406)
T ss_pred -HHhhcCC---CC----CCCCCCCCH--HHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecC
Confidence 2222110 00 011111122 334445555555432 3567778888899999888763 122222221 2
Q ss_pred ceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEec
Q 014163 373 VPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 373 ~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
..++.+.+.+........+.+.|. ++|+.+... +...+|++..
T Consensus 336 Gl~~~~~l~~~~~~~~~~~~~~l~----~~Gv~v~~~------g~~~lRl~p~ 378 (406)
T PRK12381 336 GLLIGCVLNAEYAGKAKQISQEAA----KAGVMVLIA------GPNVVRFAPA 378 (406)
T ss_pred eEEEEEEecCchhhHHHHHHHHHH----HCCcEEeeC------CCCEEEEeCC
Confidence 234445543210012234444444 999997531 2346999775
No 300
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.46 E-value=5.9e-11 Score=116.16 Aligned_cols=296 Identities=14% Similarity=0.048 Sum_probs=164.5
Q ss_pred hHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhc
Q 014163 69 EPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQ 148 (429)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~ 148 (429)
.|.+.+++.+.+.+..... +.....++.+ +++.++...+ ....++++|++|+..+++.++.. .
T Consensus 46 ~p~v~~a~~~~~~~~~~~~--~~~~~~~~~~----la~~l~~~~~----~~~~~~~SGseA~~~Al~~ar~~-------~ 108 (375)
T PRK04260 46 HPQVQQALQKQAGLIWHSP--NLYLNSLQEE----VAQKLIGDKD----YLAFFCNSGAEANEAAIKIARKA-------T 108 (375)
T ss_pred CHHHHHHHHHHHHhcCccc--CccCCHHHHH----HHHHHhcCcC----CEEEEcCccHHHHHHHHHHHHHh-------c
Confidence 6778888888776533222 1223344445 4443322221 12679999999999999998652 1
Q ss_pred CCCCCCcEEEEc-CCCchHHHHHHHhcCcee---------EEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccc
Q 014163 149 GKPYDKPNIVTG-ANVQVCWEKFARYFEVEL---------KEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEF 218 (429)
Q Consensus 149 g~~~~~~~vi~~-~~~h~s~~~~~~~~G~~v---------~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~ 218 (429)
+++.|++. ...|.+...++...|.+. ..++.. -..|++.+++.+++++.+|++..+++++|.+
T Consensus 109 ----~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~dl~~l~~~l~~~~a~vi~e~v~~~~G~~ 181 (375)
T PRK04260 109 ----GKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYA---IFNDLNSVKALVNKNTAAVMLELVQGESGVL 181 (375)
T ss_pred ----CCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEe---CCCCHHHHHHhcCCCeEEEEECCeECCCCCc
Confidence 12456654 556765544544333221 111110 0248999999998788888888889999987
Q ss_pred cC----hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc-ccCCCCeeEEEEcCcccCCCCCCeEEEEEeCC
Q 014163 219 ED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (429)
Q Consensus 219 ~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~ 293 (429)
.+ +++|.++|+++ |+++++|++|.++.. ....+.. ..++ ..|.+ +..|.+.++..+|+++.+++
T Consensus 182 ~~~~~~l~~~~~l~~~~------~~~~i~De~~~g~g~--~g~~~~~~~~~~-~pdi~--t~sK~l~~G~~ig~~~~~~~ 250 (375)
T PRK04260 182 PADKDFVKALADYCQET------GILLIVDEVQTGMGR--TGKLYAFEHYGI-EPDIF--TLAKGLANGVPVGAMLAKSS 250 (375)
T ss_pred CCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc--ccchhhhHhhCC-CCCEE--EecccccCCcceEEEEEcHH
Confidence 54 89999999999 999999999976321 1111111 1121 24544 34687776678899988642
Q ss_pred CCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHH-HHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCC
Q 014163 294 DDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEG-YKNIMENCMGNARALREGLEKTGRFEILSKDVG 372 (429)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 372 (429)
+...+.. . ....++.+++ ....+..++++.+..++ .++..+....+++.+.+.+.+.+.+..+. . .
T Consensus 251 --~~~~~~~------~-~~~~t~~~~~--~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~-~ 317 (375)
T PRK04260 251 --LGGAFGY------G-SHGSTFGGNK--LSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVTTVR-G-L 317 (375)
T ss_pred --HHhhcCC------C-CCCCCCCcCH--HHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEe-c-c
Confidence 2122110 0 0011111222 33444445555444332 23333444444555555555444222221 1 3
Q ss_pred ceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEecc
Q 014163 373 VPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHL 426 (429)
Q Consensus 373 ~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~ 426 (429)
...+.+.+. .+..++.+.|. ++|+.+.+ .+...+|++.++
T Consensus 318 g~~~~~~~~----~~~~~~~~~l~----~~Gi~v~~------~~~~~lR~~~~~ 357 (375)
T PRK04260 318 GYMIGIETT----ADLSQLVEAAR----DKGLIVLT------AGTNVIRLLPPL 357 (375)
T ss_pred ceEEEEEec----CcHHHHHHHHH----hCCCEEec------CCCCEEEEcCCC
Confidence 344555542 13456666666 99998753 133569998854
No 301
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.46 E-value=7.5e-12 Score=111.28 Aligned_cols=300 Identities=14% Similarity=0.069 Sum_probs=184.2
Q ss_pred ChHHHHHHHHHHcCcCCCCCccCh---hhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHH
Q 014163 68 MEPECDKLVMASINKNYVDMDEYP---VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (429)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~ 144 (429)
.+|++.++-..++.+......+.. +++.+.+.+...++++.|.+. .+....+-.||.-++-+.+..
T Consensus 82 shPeii~a~~~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~rED-------~ilypscfdANag~feail~p---- 150 (417)
T KOG1359|consen 82 SHPEIINAGQKALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHGRED-------TILYPSCFDANAGAFEAILTP---- 150 (417)
T ss_pred CChHHHHHHHHHHHHhCCCccceeEEecchHHHHHHHHHHHHHhCCCc-------eEEeccccccchHHHHHhcCh----
Confidence 468877777777776555443332 677777788888999888765 566666777776666665442
Q ss_pred HHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCC---eEEEEeeCCC-ccccccC
Q 014163 145 RKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENT---ICVAAILGST-LTGEFED 220 (429)
Q Consensus 145 ~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~---~~v~~~~~~~-~tG~~~~ 220 (429)
++-|+-.+.-|.|+-.-.++.. ....+|+-.|+..+.+.. ..++++.+-. .-|.+.|
T Consensus 151 ---------edAvfSDeLNhASIIdGirLck----------ry~h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaP 211 (417)
T KOG1359|consen 151 ---------EDAVFSDELNHASIIDGIRLCK----------RYRHVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAP 211 (417)
T ss_pred ---------hhhhhccccccchhhhhhHHHh----------hhccchhHHHHHHHHHhhhheEEEEEecceeccCCCccc
Confidence 1234445567777665444322 235678888887776532 3355555544 5699999
Q ss_pred hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccC-CCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccc
Q 014163 221 VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFR-LPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDE 299 (429)
Q Consensus 221 l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~-~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~ 299 (429)
+++|++++++| |.++++|++|+-++..-........++ ...+|.+.....|.+++..| |+... +..+...
T Consensus 212 l~ei~~La~kY------gaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~G-Gyttg--p~~li~l 282 (417)
T KOG1359|consen 212 LEEISQLAKKY------GALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASG-GYTTG--PKPLISL 282 (417)
T ss_pred HHHHHHHHHhc------CcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCCC-CCccC--ChhHHHH
Confidence 99999999999 999999999986543111111122233 34699999999998764443 44332 2222222
Q ss_pred ccc-ccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEE
Q 014163 300 LVF-HINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAF 378 (429)
Q Consensus 300 ~~~-~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f 378 (429)
++. ..+|+.++ +-+...+-....++..+-.. .+.+.+...+.+++++..+..+ |.+.+.. -++..+
T Consensus 283 lrqr~RpylFSn--------slppavV~~a~ka~dllm~s--~~~i~~~~a~~qrfr~~me~aG-ftIsg~~--hPI~pv 349 (417)
T KOG1359|consen 283 LRQRSRPYLFSN--------SLPPAVVGMAAKAYDLLMVS--SKEIQSRQANTQRFREFMEAAG-FTISGAS--HPICPV 349 (417)
T ss_pred HHhcCCceeecC--------CCChhhhhhhHHHHHHHHhh--HHHHHHHHHHHHHHHHHHHhcC-ceecCCC--CCccce
Confidence 221 23455443 22211111122223222221 4556677788889999987766 9887642 344444
Q ss_pred EecCCCCCCHHHHHHHHHHHHhccCceeccc-CCCCCCCceEEEEEec
Q 014163 379 SLKDSSAHTVFEISEGLRKKLNRFQVVYPQK-LPMSYPWSTKLRVISH 425 (429)
Q Consensus 379 ~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~-~~~~~~~~~~lRi~~~ 425 (429)
-+-+ .+++.++.+.|..+||.+..+ .|...++..-||+.++
T Consensus 350 ~lGd------a~lA~~~ad~lLk~Gi~Vigfs~PvVP~gkariRVqiS 391 (417)
T KOG1359|consen 350 MLGD------ARLASKMADELLKRGIYVIGFSYPVVPKGKARIRVQIS 391 (417)
T ss_pred eccc------HHHHHHHHHHHHhcCceEEeecCCcCCCCceEEEEEEe
Confidence 3322 244545555555999999877 7777788888999875
No 302
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=99.44 E-value=1.3e-11 Score=120.35 Aligned_cols=286 Identities=13% Similarity=0.087 Sum_probs=195.1
Q ss_pred cChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHH
Q 014163 89 EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWE 168 (429)
Q Consensus 89 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~ 168 (429)
..++..++-.++.++|+++.|.+. ...-.++|.++-...+++.|.....+ |. ..+...++|..+|....
T Consensus 576 QaqGY~~lf~~Le~~Lc~iTG~D~------~s~QPNsGA~GEYaGL~~IRaY~~~k----ge-~hRnvClIPvSAHGTNP 644 (1001)
T KOG2040|consen 576 QAQGYQQLFTELEKDLCEITGFDS------FSLQPNSGAQGEYAGLRVIRAYLESK----GE-GHRNVCLIPVSAHGTNP 644 (1001)
T ss_pred HHhhHHHHHHHHHHHhheeecccc------eeecCCCCcccchhhHHHHHHHHHhc----cC-CcceeEEEeecccCCCh
Confidence 445888888899999999999985 23344566666666777766543322 21 12347789999999988
Q ss_pred HHHHhcCceeEEEeccCCccccCHHHHHHHhhhC---CeEEEEeeCCCccccc-cChHHHHHHHHHhhhccCCCccEEee
Q 014163 169 KFARYFEVELKEVKLEEGYYVMNPVKAVELVDEN---TICVAAILGSTLTGEF-EDVKLLHDLLTKKNEETGWDTPIHVD 244 (429)
Q Consensus 169 ~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~---~~~v~~~~~~~~tG~~-~~l~~I~~la~~~~~~~~~~~~l~vD 244 (429)
..|.+.|.+++.|.++.+ |.+|+.+|+++.++. -.++.+++|+|. |.+ ..+++++++.++| |--|..|
T Consensus 645 ASA~MagmkvvpV~~~~~-G~id~~dLk~kaekh~~~Laa~MvTYPST~-GvfE~~i~d~cd~iHeh------GGQVYlD 716 (1001)
T KOG2040|consen 645 ASAAMAGMKVVPVGCDAN-GNIDMVDLKAKAEKHKDNLAALMVTYPSTH-GVFEEGIDDICDIIHEH------GGQVYLD 716 (1001)
T ss_pred hhHHhcCCEEEEeeccCC-CCccHHHHHHHHHHhhhhhheeEEeccccc-ccccccHHHHHHHHHhc------CCEEEec
Confidence 889999999999999875 899999999988764 367889999888 776 5699999999999 9999999
Q ss_pred cccccccccccCCCCccccCCCCeeEEEEcCcccCCCC-----CCeEEEEEeCCCCcccccccccCC-C---CCCCCCce
Q 014163 245 AASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVY-----AGVGWVVWRTKDDLPDELVFHINY-L---GSDQPTFT 315 (429)
Q Consensus 245 ~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p-----~g~g~l~~~~~~~~~~~~~~~~~~-~---~~~~~~~~ 315 (429)
||--.....+..+ +.-++|+.-.+.||.++.| +|.|-+.++. .+...+...+.. . .+..+--+
T Consensus 717 GANMNAqVGlc~p------Gd~GaDV~HLNLHKTFcIPHGGGGPg~gPIgVK~--HLapfLP~HpVvs~~~~~~~~~~gs 788 (1001)
T KOG2040|consen 717 GANMNAQVGLCRP------GDIGADVCHLNLHKTFCIPHGGGGPGMGPIGVKK--HLAPFLPSHPVVSPGRPEDTSPVGS 788 (1001)
T ss_pred CCCccceecccCC------ccccccceeecccceeeecCCCCCCCCCccchhh--hccccCCCCCccCCCCCCCCCCccc
Confidence 9874321111221 2237999999999986655 4555565543 232222111111 0 11111001
Q ss_pred ec----cCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC---CceEEEEEecC---CCC
Q 014163 316 LN----FSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV---GVPLVAFSLKD---SSA 385 (429)
Q Consensus 316 ~~----~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~---~~~~v~f~~~~---~~~ 385 (429)
.. |+. .....-|+.++.+|..|++..-+...-+++|+.++|+.. ++++.... -.+.+.+..++ ..+
T Consensus 789 VsaaP~Gsa--~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~h--Ykil~~~~~~~vaHEFIlD~r~fK~~ag 864 (1001)
T KOG2040|consen 789 VSAAPWGSA--LILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLESH--YKILFRGENGLVAHEFILDLRPFKKTAG 864 (1001)
T ss_pred eeccCCCcc--eeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhhc--cceeEecCCcceeeeeeeechhhccccC
Confidence 11 222 122346888899999999999998999999999999986 45544332 12334444433 246
Q ss_pred CCHHHHHHHHHHHHhccCceeccc
Q 014163 386 HTVFEISEGLRKKLNRFQVVYPQK 409 (429)
Q Consensus 386 ~~~~~~~~~L~~~l~~~G~~~~~~ 409 (429)
+.+.+++++|+ +.|+...+.
T Consensus 865 ieavDvAKRL~----DYgFHaPTm 884 (1001)
T KOG2040|consen 865 IEAVDVAKRLM----DYGFHAPTM 884 (1001)
T ss_pred CcHHHHHHHHH----hccCCCCcc
Confidence 88999999999 999886654
No 303
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.44 E-value=1.6e-11 Score=117.92 Aligned_cols=295 Identities=13% Similarity=0.101 Sum_probs=170.5
Q ss_pred ChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHh
Q 014163 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (429)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~ 147 (429)
+++...++|.. .--.|..+|....||+. +++++|.+. .+.|..|..+..++..+...+
T Consensus 55 pS~~m~aAM~~----GDD~Y~gdpSv~~Lee~----vael~G~E~-------alpthqGRgaE~Il~~~~~~~------- 112 (467)
T TIGR02617 55 VTQSMQAAMMR----GDEAYSGSRSYYALAES----VKNIFGYQY-------TIPTHQGRGAEQIYIPVLIKK------- 112 (467)
T ss_pred CCHHHHHHHHc----CCcccccCchHHHHHHH----HHHHhCCce-------EEECCCCchHHHHHHHhhccc-------
Confidence 55555555553 11236678888888866 788999975 788988999999888877652
Q ss_pred cCCCCC--CcEEEEcCCCchH-HHHHHHhcCceeEEEecc---------CCccccCHHHHHHHhhh----CCeEEEEeeC
Q 014163 148 QGKPYD--KPNIVTGANVQVC-WEKFARYFEVELKEVKLE---------EGYYVMNPVKAVELVDE----NTICVAAILG 211 (429)
Q Consensus 148 ~g~~~~--~~~vi~~~~~h~s-~~~~~~~~G~~v~~v~~~---------~~~~~~d~~~l~~~i~~----~~~~v~~~~~ 211 (429)
.|..+. .+.-+++...|+- ..-.+.+.|+.++.++.+ +..|.+|+++|+++|.+ +...+..+..
T Consensus 113 ~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt 192 (467)
T TIGR02617 113 REQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATIT 192 (467)
T ss_pred ccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEE
Confidence 111111 0011334445543 344567788887776432 12378999999999985 2223332222
Q ss_pred CCc-cccc---cChHHHHHHHHHhhhccCCCccEEeecccccccccccC-CC---Cccc---c---CCCCeeEEEEcCcc
Q 014163 212 STL-TGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY-PD---LEWD---F---RLPLVKSINVSGHK 277 (429)
Q Consensus 212 ~~~-tG~~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~-~~---~~~~---~---~~~~~d~~~~s~hK 277 (429)
+|. -|.+ +++++++++|++| |+.+|.|||-..--+.|.. -+ ...+ + -...+|++++|..|
T Consensus 193 ~N~~GGqpvslenlr~V~~la~~~------GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsK 266 (467)
T TIGR02617 193 CNSAGGQPVSLANLKAVYEIAKKY------DIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKK 266 (467)
T ss_pred EecCCCEEeCHHHHHHHHHHHHHc------CCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCC
Confidence 333 3544 6788999999999 9999999986431011110 00 0011 1 02579999999999
Q ss_pred cCCCCCCeEEEEEeCC---CCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH
Q 014163 278 YGLVYAGVGWVVWRTK---DDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARAL 354 (429)
Q Consensus 278 ~~~~p~g~g~l~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l 354 (429)
-+++|.| |+++.+++ +++.+.-.....|- +..+| |..++-.+-++...|... --+.++++.....+||
T Consensus 267 glgApvG-g~Lag~d~~~~~l~~~~~~~~i~~E--Gf~tY---GGlagrd~ea~a~Gl~e~---~~~~yl~~ri~qv~yl 337 (467)
T TIGR02617 267 DAMVPMG-GLLCFKDDSFFDVYTECRTLCVVQE--GFPTY---GGLEGGAMERLAVGLYDG---MNLDWLAYRINQVQYL 337 (467)
T ss_pred CCCCccc-ceEEecchhHHHHHHHHHhhccccc--CCcCc---CchhHHHHHHHHhhhhhc---ccHHHHHHHHHHHHHH
Confidence 9999988 56666665 22211111111111 12222 334333444444444322 1245566667778899
Q ss_pred HHHHHhCCCeEEeeCCCCceEEEEEe------cCCCCCCHHHHHHHHHHHHhccCce
Q 014163 355 REGLEKTGRFEILSKDVGVPLVAFSL------KDSSAHTVFEISEGLRKKLNRFQVV 405 (429)
Q Consensus 355 ~~~L~~~~~~~~~~~~~~~~~v~f~~------~~~~~~~~~~~~~~L~~~l~~~G~~ 405 (429)
.++|.+.+ +.++. . ..+-+.+.. .+........++..|.. +.||.
T Consensus 338 ~~~L~~~G-vpi~~-~-Gghav~iDa~~~lphip~~~fpa~al~~~ly~---~~GiR 388 (467)
T TIGR02617 338 VNGLEEIG-VVCQQ-A-GGHAAFVDAGKLLPHIPADQFPAHALACELYK---VAGIR 388 (467)
T ss_pred HHHHHhCC-CcEEe-c-CccEEEEehhhhCCCCChhhCcHHHHHHHHHH---HcCcc
Confidence 99999876 77765 3 233222221 12223566777777773 44543
No 304
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.44 E-value=1.4e-10 Score=107.08 Aligned_cols=308 Identities=11% Similarity=0.016 Sum_probs=192.0
Q ss_pred CCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCC
Q 014163 83 NYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGAN 162 (429)
Q Consensus 83 ~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~ 162 (429)
..+.|+.+.+..-+++.+.+.+.+.=|.+.+.. .++.|+|+|.|+...+..+... .++-|++|-+
T Consensus 105 s~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~---dI~LT~GAS~ai~~il~l~~~~------------~~~GvliPiP 169 (475)
T KOG0258|consen 105 SLGAYSDSQGVPGVRKHVAEFIERRDGIPADPE---DIFLTTGASPAIRSILSLLIAG------------KKTGVLIPIP 169 (475)
T ss_pred cccccccccCChhHHHHHHHHHHhccCCCCCHH---HeeecCCCcHHHHHHHHHHhcC------------CCCceEeecC
Confidence 445688889999999999999999888655432 3889999999999888877652 3467999999
Q ss_pred CchHHHHHHHhcCceeEEEeccC-CccccCHHHHHHHhhh-----CCeEEEEeeCCCccccc---cChHHHHHHHHHhhh
Q 014163 163 VQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDE-----NTICVAAILGSTLTGEF---EDVKLLHDLLTKKNE 233 (429)
Q Consensus 163 ~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~-----~~~~v~~~~~~~~tG~~---~~l~~I~~la~~~~~ 233 (429)
-|+-|......+|...+..-+|+ .+|.+|.++|++.+++ +++++++.+|-||||.+ ..+++|..+|+++
T Consensus 170 QYPLYsAti~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~-- 247 (475)
T KOG0258|consen 170 QYPLYSATISLLGGTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEE-- 247 (475)
T ss_pred CCchhHHHHHHhCCcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHc--
Confidence 99988877788887766555663 4599999999998876 57889999999999998 6799999999999
Q ss_pred ccCCCccEEeecccccccccccCCCCc-c-------ccCC---CCeeEEEEc-Ccc--cCCCCCCeEEEEEeCCC--Ccc
Q 014163 234 ETGWDTPIHVDAASGGFIAPFLYPDLE-W-------DFRL---PLVKSINVS-GHK--YGLVYAGVGWVVWRTKD--DLP 297 (429)
Q Consensus 234 ~~~~~~~l~vD~a~~~~~~~~~~~~~~-~-------~~~~---~~~d~~~~s-~hK--~~~~p~g~g~l~~~~~~--~~~ 297 (429)
++.++.|++|-..+ +.+..+ + .++- ..+-.+++. .+| ++-++.+.|++=+-+.. ...
T Consensus 248 ----~l~llaDEVYQ~Nv---y~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~ 320 (475)
T KOG0258|consen 248 ----GLVLLADEVYQDNV---YTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQ 320 (475)
T ss_pred ----CeEEechHHHHhhc---cCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHH
Confidence 99999999984322 111100 0 1111 134444443 334 34445555665332211 100
Q ss_pred ccccc-----ccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCC
Q 014163 298 DELVF-----HINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVG 372 (429)
Q Consensus 298 ~~~~~-----~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~ 372 (429)
..+.. .+.-.+.........-..++-....++.+ .-..+.+..+++++.+.+.+++++++....+ +
T Consensus 321 qi~Kl~si~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~-------Ekd~il~~l~~ra~l~~~~~ns~~gi~cn~~--q 391 (475)
T KOG0258|consen 321 QIKKLASIKLCPQVSGQKLVDLVVNPPKPGDPSYDLFSS-------EKDGILSSLRSRAKLTEDAFNSLEGISCNPV--Q 391 (475)
T ss_pred HHHHHHhhhhcCCccchhhhceecCCCCCCCcchhhhhh-------hhHhHHHHHHHHhHHHHHHHhhcCceeeccC--c
Confidence 00000 00000000000000000011112222221 1255667788889999999999998887633 5
Q ss_pred ceEEEEEecC-C---------CCCCHHHHHHHHHHHHhccCceeccc-CCCCCCCceEEEEEec
Q 014163 373 VPLVAFSLKD-S---------SAHTVFEISEGLRKKLNRFQVVYPQK-LPMSYPWSTKLRVISH 425 (429)
Q Consensus 373 ~~~v~f~~~~-~---------~~~~~~~~~~~L~~~l~~~G~~~~~~-~~~~~~~~~~lRi~~~ 425 (429)
...+.|--.. + .++.++++. ..+.|.+.||++.+. ....-.|.+=+|.||-
T Consensus 392 GAMY~fP~i~lP~kaie~A~~~~~~PD~FY--c~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiL 453 (475)
T KOG0258|consen 392 GAMYLFPQISLPPKAIEAAKALGIAPDEFY--CLKLLEATGICVVPGSGFGQKEGTYHFRTTIL 453 (475)
T ss_pred cceeecccccCCHHHHHHHHHhCCCCcHHH--HHHHHHhcCeEEecCCCCCCCCceeEEEEeec
Confidence 5566653211 1 134455553 223334889999887 3344577788999874
No 305
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.43 E-value=9.7e-11 Score=114.93 Aligned_cols=305 Identities=13% Similarity=-0.028 Sum_probs=174.0
Q ss_pred ChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHh
Q 014163 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (429)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~ 147 (429)
.+|.+.+++.+.+....... .....+.+.++.+++++..+.+ ...++++|+||+..+++.++.... +
T Consensus 53 ~~p~v~~a~~~q~~~~~~~~--~~~~~~~~~~la~~l~~~~~~~-------~v~f~~SGseA~e~Aik~ar~~~~-~--- 119 (395)
T PRK03715 53 CNPGMVEALAAQAEKLINPS--PAFYNEPMAKLAGLLTQHSCFD-------KVFFANSGAEANEGAIKLARKWGR-K--- 119 (395)
T ss_pred CCHHHHHHHHHHHHhccccc--ccccCHHHHHHHHHHhhccCCC-------EEEEeCCcHHHHHHHHHHHHHHhh-c---
Confidence 45888888877765432211 1223456667777777654433 289999999999999999975311 0
Q ss_pred cCCCCCCcEEEE-cCCCchHHHHHHHhcCceeE---EEeccCCc---cccCHHHHHHHhhhCCeEEEEeeCCCccccccC
Q 014163 148 QGKPYDKPNIVT-GANVQVCWEKFARYFEVELK---EVKLEEGY---YVMNPVKAVELVDENTICVAAILGSTLTGEFED 220 (429)
Q Consensus 148 ~g~~~~~~~vi~-~~~~h~s~~~~~~~~G~~v~---~v~~~~~~---~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~ 220 (429)
+. .++..|+. ....|.+...++...|.... ..|...+. ...|++++++.+.+++.+|++.......|.+.|
T Consensus 120 -~~-~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavi~Epv~~~gG~~~~ 197 (395)
T PRK03715 120 -HK-NGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITDKTVAVMLEPVQGEGGVIPA 197 (395)
T ss_pred -cC-CCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCCCceEEEEeCCcCCCCCccC
Confidence 00 11234554 44567666555555453211 11111110 024789999999877888888877777787766
Q ss_pred ----hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc-ccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCC
Q 014163 221 ----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDD 295 (429)
Q Consensus 221 ----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~ 295 (429)
+++|.++|++| |+++++|++|.|+.- ...-+.. .+++ ..|.++++ |.+.++..+|.++.+++ .
T Consensus 198 ~~~~l~~l~~l~~~~------~~llI~DEv~tG~GR--tG~~~a~~~~gv-~PDi~t~g--K~lg~G~p~~av~~~~~-i 265 (395)
T PRK03715 198 TREFMQQLRALTKQH------GLLLIVDEVQTGCGR--TGTLFAYELSGI-EPDIMTLG--KGIGGGVPLAALLAKAE-V 265 (395)
T ss_pred CHHHHHHHHHHHHHc------CCEEEEeccccCCCC--CcchhhHhhcCC-CCceeeeh--hhhhCCcceEEEEEccc-c
Confidence 99999999999 999999999986321 1111010 1122 36776663 66656566777776543 2
Q ss_pred cccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCC---CeEEeeCCCC
Q 014163 296 LPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTG---RFEILSKDVG 372 (429)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~ 372 (429)
. . ....... .+ +.+.+ ....+..++++.+.+ ++..++.+++.++|.+.|+++. ++.-+. ..
T Consensus 266 ~--~--~~~~~~~---~T--~~g~p--l~~aaala~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~i~~vr--G~ 329 (395)
T PRK03715 266 A--V--FEAGDQG---GT--YNGNP--LMTAVGVAVISQLLA---PGFLEGVRARGEYLKEKLLELSEERGLEGER--GE 329 (395)
T ss_pred c--c--ccCCCcC---CC--CCCCH--HHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHhhcCCcCeEE--cc
Confidence 1 1 1111111 11 11221 344555666666643 3567778888888888887641 132221 13
Q ss_pred ceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEec
Q 014163 373 VPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 373 ~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
..++.+.+... ....+.+.+. ++.++|+.+... +...||++..
T Consensus 330 Glm~~i~l~~~---~~~~~~~~~~-~~~~~Gi~~~~~------~~~~lR~~p~ 372 (395)
T PRK03715 330 GLLRALLLGKD---IGPQIVEKAR-DMQPDGLLLNAP------RPNLLRFMPA 372 (395)
T ss_pred eeEEEEEecCc---hHHHHHHHHH-hccCCCEEEeec------CCCEEEEeCC
Confidence 45666666421 1223333333 222459886531 1245898765
No 306
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.42 E-value=5e-11 Score=112.48 Aligned_cols=308 Identities=14% Similarity=0.055 Sum_probs=179.7
Q ss_pred CCCCCcccccccc----CCChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhC-CCCCCCCCCCceEeCCch
Q 014163 53 DGNPRLNLASFVT----TWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFN-TPVADDKTAVGVGTVGSS 127 (429)
Q Consensus 53 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g-~~~~~~~~~~~~~t~g~t 127 (429)
+|..+++|.++.. ...+|.+.+++.+-.+.-++....+ ..+...++.+.|.++.+ .+ ...++++|+
T Consensus 40 ~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~sn~~--~~~~~~~la~~L~~~s~~~d-------~vff~NSGa 110 (404)
T COG4992 40 QGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHVSNLF--YNEPQAELAEKLVELSPFAD-------RVFFCNSGA 110 (404)
T ss_pred CCCEeeeeccceeeeccCCCCHHHHHHHHHHHHHhhhccccc--CChHHHHHHHHHHhhCcccc-------EEEEcCCcH
Confidence 4444444444332 2456888888877555433211111 12223356677888876 33 389999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCC-chHHHHHHHhc-------Cce-----eEEEeccCCccccCHHH
Q 014163 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANV-QVCWEKFARYF-------EVE-----LKEVKLEEGYYVMNPVK 194 (429)
Q Consensus 128 ~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~-h~s~~~~~~~~-------G~~-----v~~v~~~~~~~~~d~~~ 194 (429)
|||-.|+..+|... + +..+.+||..... |.-..-+.... +.. ++.+|. =|+++
T Consensus 111 EA~EaAiKlARk~~-------~-~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpf------nDi~a 176 (404)
T COG4992 111 EANEAALKLARKYT-------G-DPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPF------NDIEA 176 (404)
T ss_pred HHHHHHHHHHHHHc-------C-CCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCC------CCHHH
Confidence 99999999998642 1 1124567765554 43211111111 111 223332 37899
Q ss_pred HHHHhhhCCeEEEEeeCCCcccccc----ChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccc-cCCCCee
Q 014163 195 AVELVDENTICVAAILGSTLTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPLVK 269 (429)
Q Consensus 195 l~~~i~~~~~~v~~~~~~~~tG~~~----~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~~~~~d 269 (429)
++++|+++|.+|++--..-..|.+- =++++.++|++| |+++|.|++|-|..- ...-+.+. +++ ..|
T Consensus 177 l~~ai~~~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~------g~LLI~DEVQtG~GR--TGk~fA~e~~gV-~PD 247 (404)
T COG4992 177 LEAAIDEDTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEH------GALLILDEVQTGLGR--TGKLFAYEHYGV-EPD 247 (404)
T ss_pred HHHHhccCeEEEEEecccCCCCCCCCCHHHHHHHHHHHHHh------CeEEEEeccccCCCc--cchHHHHHHhCC-CCC
Confidence 9999999999998877777777763 378999999999 999999999976321 11101110 111 246
Q ss_pred EEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHH---HHHHHcCHHHHHHHHHH
Q 014163 270 SINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQY---YQFIRLGFEGYKNIMEN 346 (429)
Q Consensus 270 ~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~---~al~~l~~~g~~~~~~~ 346 (429)
.++ .-|.++++..+|.++++ +... ..+ .+ +. .||--+...++.. ++++.+.+ ++..++
T Consensus 248 I~t--laK~LgGG~PigA~la~-~~~~-~~~--~~----G~------HgSTfGGNpLacAv~~a~l~~l~~---e~ll~~ 308 (404)
T COG4992 248 ILT--LAKALGGGFPIGAMLAT-EEIA-SAF--TP----GD------HGSTFGGNPLACAVALAVLEVLLE---EGLLEN 308 (404)
T ss_pred EEE--eeccccCCccceeeEEc-hhhh-hcC--CC----Cc------ccCCCCcCHHHHHHHHHHHHHHcc---hhHHHH
Confidence 555 34888888889998886 2211 110 11 11 1222223333444 44444444 456677
Q ss_pred HHHHHHHHHHHHHhCCC-eEEeeCCC-CceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEE
Q 014163 347 CMGNARALREGLEKTGR-FEILSKDV-GVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVI 423 (429)
Q Consensus 347 ~~~~~~~l~~~L~~~~~-~~~~~~~~-~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~ 423 (429)
.++..++|++.|+++.. +.++..-. ..-++-+.+.++ ....++.+.|. ++|+.+... +...+|+.
T Consensus 309 v~~~g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~--~~a~~~~~~~~----~~gvL~~~a------~~~ViR~~ 375 (404)
T COG4992 309 VREKGEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEP--YRARDIVRALR----EEGVLVLPA------GPNVIRFL 375 (404)
T ss_pred HHHHHHHHHHHHHHHhhcCCceeeeecceeEEEEEecCc--ccHHHHHHHHH----HCCeEEecC------CCCeEEec
Confidence 88888888888887631 33333321 233556666432 24677888888 999887642 33368875
No 307
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.42 E-value=9.6e-11 Score=116.51 Aligned_cols=206 Identities=12% Similarity=-0.046 Sum_probs=121.6
Q ss_pred CCCCCccccccccC----CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchH
Q 014163 53 DGNPRLNLASFVTT----WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (429)
Q Consensus 53 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~ 128 (429)
+|+.++.+.++... ..+|.+.+++.+.++........++... ++++.+++++.... ...+++||+|
T Consensus 46 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~~~~~----~lae~l~~~~~~~~------~v~~~~sGse 115 (423)
T TIGR00713 46 DGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERGTSYGAPTEAEI----LLAKEIISRVPSVE------MVRFVNSGTE 115 (423)
T ss_pred CCCEEEEccccccccccCCCCHHHHHHHHHHHHhCCcCCCCCHHHH----HHHHHHHHhCCccc------EEEEeCCHHH
Confidence 45555555554432 4568888888887765432112233333 45555666654321 2889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHH-HHHh--cCceeEEEeccC--------Ccc---ccCHHH
Q 014163 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEK-FARY--FEVELKEVKLEE--------GYY---VMNPVK 194 (429)
Q Consensus 129 a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~-~~~~--~G~~v~~v~~~~--------~~~---~~d~~~ 194 (429)
|+..|++.++.. . ++++|+...++|..+.. +... .|......+..+ +.. .-|+++
T Consensus 116 A~e~Alk~ar~~-~----------gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 184 (423)
T TIGR00713 116 ATMSAVRLARGY-T----------GRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEA 184 (423)
T ss_pred HHHHHHHHHHHh-h----------CCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHH
Confidence 999999998763 1 23577776665554322 2111 111100001000 000 127999
Q ss_pred HHHHhh---hCCeEEEEe-eCCCccccccC----hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc-ccCC
Q 014163 195 AVELVD---ENTICVAAI-LGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRL 265 (429)
Q Consensus 195 l~~~i~---~~~~~v~~~-~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~ 265 (429)
|++.++ +++.+|++. .+++ +|.+.+ +++|.++|++| ++++++|++|.++.. ...... .+++
T Consensus 185 l~~~i~~~~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~------~~llI~DEv~~g~r~---g~~~~~~~~~~ 254 (423)
T TIGR00713 185 LEEVFEEYGEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEY------GSLLIFDEVMTGFRV---ALGGAQEYFGV 254 (423)
T ss_pred HHHHHHHcCCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHh------CCEEEEEcccccccc---CcchhHHHhCC
Confidence 999997 456777775 4444 787755 78999999999 999999999976421 111111 1121
Q ss_pred CCeeEEEEcCcccCCCCCCeEEEEEeC
Q 014163 266 PLVKSINVSGHKYGLVYAGVGWVVWRT 292 (429)
Q Consensus 266 ~~~d~~~~s~hK~~~~p~g~g~l~~~~ 292 (429)
..|.+ +.-|.+.+++++|+++.++
T Consensus 255 -~pDi~--t~sK~l~~G~pig~v~~~~ 278 (423)
T TIGR00713 255 -EPDLT--TLGKIIGGGLPVGAFGGRR 278 (423)
T ss_pred -Ccchh--hhhhhhcCCCceeeeeEHH
Confidence 24543 3457666778889988754
No 308
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.41 E-value=1.3e-11 Score=116.74 Aligned_cols=218 Identities=22% Similarity=0.129 Sum_probs=153.2
Q ss_pred hhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchH----
Q 014163 91 PVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC---- 166 (429)
Q Consensus 91 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s---- 166 (429)
|....+| ..++++.|.+. ....++|..|+..+++.+... ++.++.+...|..
T Consensus 77 Pt~~~le----~~iaal~ga~~-------~l~fsSGmaA~~~al~~L~~~-------------g~~iV~~~~~Y~gT~~~ 132 (409)
T KOG0053|consen 77 PTRDVLE----SGIAALEGAAH-------ALLFSSGMAAITVALLHLLPA-------------GDHIVATGDVYGGTLRI 132 (409)
T ss_pred CchHHHH----HHHHHHhCCce-------EEEecccHHHHHHHHHHhcCC-------------CCcEEEeCCCcccHHHH
Confidence 4444555 45899999874 677778888888888887641 2567776655543
Q ss_pred HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecc
Q 014163 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (429)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a 246 (429)
+.+....+|+....++++ |++++++++++++++|++-.|+||+..+-|+++|+++|+++ |+.++||..
T Consensus 133 l~~~~~~~gie~~~vd~~------~~~~~~~~i~~~t~~V~~ESPsNPll~v~DI~~l~~la~~~------g~~vvVDnT 200 (409)
T KOG0053|consen 133 LRKFLPKFGGEGDFVDVD------DLKKILKAIKENTKAVFLESPSNPLLKVPDIEKLARLAHKY------GFLVVVDNT 200 (409)
T ss_pred HHHHHHHhCceeeeechh------hHHHHHHhhccCceEEEEECCCCCccccccHHHHHHHHhhC------CCEEEEeCC
Confidence 455566788888887653 46789999999999999999999999999999999999999 999999999
Q ss_pred cccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCe--EEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhH
Q 014163 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGV--GWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQ 324 (429)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~--g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~ 324 (429)
.+.+. ....+. .+||.++-|..||+.+...+ |.++.+..+ +...+.....+++.. ..
T Consensus 201 f~~p~---~~~pL~-----lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~-~~~~l~~~~~~lg~~------------~~ 259 (409)
T KOG0053|consen 201 FGSPY---NQDPLP-----LGADIVVHSATKYIGGHSDVIGGSVVLNSEE-LASRLKFLQEDLGWC------------ED 259 (409)
T ss_pred cCccc---ccChhh-----cCCCEEEEeeeeeecCCcceeeeEEecCcHH-HHHHHHHHHHHhcCC------------CC
Confidence 98743 222222 26999999999999888764 555544222 222222222222221 23
Q ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEe
Q 014163 325 IIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEIL 367 (429)
Q Consensus 325 ~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 367 (429)
...+|..++ |-..+.-+++++.+++..+.+.|.+.|.++-+
T Consensus 260 p~~~~ll~R--glktl~lRi~~~~ena~~~A~~Le~~~~v~kv 300 (409)
T KOG0053|consen 260 PFDLFLLSR--GLKTLHLRINKHSENALKIALLLEAHPKVKKV 300 (409)
T ss_pred HHHHHHHhc--CcchhhhhHHHHHHHHHHHHHHhhhCCceeEE
Confidence 334444443 33445666777888888888999988877733
No 309
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.37 E-value=3.6e-10 Score=111.22 Aligned_cols=326 Identities=13% Similarity=0.048 Sum_probs=172.4
Q ss_pred CCCCCccccccc----cCCChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchH
Q 014163 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (429)
Q Consensus 53 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~ 128 (429)
+|+.++.+.++. -...+|.+.+++.+.++.-..... ....+...++.+.|.++.+.. ....++++|+|
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~--~~~~~~~~~la~~L~~~~~~~------~~v~f~~sGse 109 (408)
T PRK04612 38 QGREYLDLAAGIAVCGLGHNDPDLVAALTEQAGKLWHTSN--VFYSAPPLKLAEELVTASRFA------EKVFLCNSGTE 109 (408)
T ss_pred CCCEEEEcCccHhhccCCCCCHHHHHHHHHHHHhcccccc--ccCCHHHHHHHHHHHhhCCCC------CEEEEcCchHH
Confidence 455544444332 224568888888777664222111 112233345666677665321 13889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCC-CchHHHHHHHhcCceeEE---EeccCCc---cccCHHHHHHHhhh
Q 014163 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGAN-VQVCWEKFARYFEVELKE---VKLEEGY---YVMNPVKAVELVDE 201 (429)
Q Consensus 129 a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~-~h~s~~~~~~~~G~~v~~---v~~~~~~---~~~d~~~l~~~i~~ 201 (429)
|+..|++.++..... .|.+.++..|+.-.. .|....-+....|-.... -|...+. -..|++.+++.+..
T Consensus 110 A~e~AlklAr~~~~~----~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~ 185 (408)
T PRK04612 110 ANEAAIKLVRKWASS----QGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAG 185 (408)
T ss_pred HHHHHHHHHHHHHHh----hCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhCC
Confidence 999999999864211 121112345665444 454433333322211100 0111100 01378999999876
Q ss_pred CCeEEEEeeCCCccccccC-----hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc-ccCCCCeeEEEEcC
Q 014163 202 NTICVAAILGSTLTGEFED-----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSG 275 (429)
Q Consensus 202 ~~~~v~~~~~~~~tG~~~~-----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~d~~~~s~ 275 (429)
++.+.+++-|...+|.+.+ +++|.++|++| ++++++|++|.++.. ...-+.. ..+. ..|.+++
T Consensus 186 ~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~------g~llI~DEv~tg~gr--~G~~~a~~~~~~-~pdi~t~-- 254 (408)
T PRK04612 186 GDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQH------DALLVLDEIQCGMGR--TGTLFAHWQEQV-TPDIVTL-- 254 (408)
T ss_pred CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--CCchhhhhhcCC-CCCEEEE--
Confidence 6777777788777765522 89999999999 999999999976321 1110000 0111 2454443
Q ss_pred cccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Q 014163 276 HKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALR 355 (429)
Q Consensus 276 hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~ 355 (429)
-|.+.+++.+|+++.+++ +.+.+.. . ....++.+.+ ....+..++|+.+.+ .+..++..++.+++.
T Consensus 255 ~K~l~~G~piga~~~~~~--~~~~~~~--~-----~~~~t~~~~p--~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~ 320 (408)
T PRK04612 255 AKALGGGFPIGAMLAGPK--VAETMQF--G-----AHGTTFGGNP--LAAAVARVALRKLAS---PQIAANVARQSAALR 320 (408)
T ss_pred cchhcCCCceEEEEECHH--HHhhhcC--C-----CcCCCCCCCH--HHHHHHHHHHHHHHh---ccHHHHHHHHHHHHH
Confidence 476667788898876532 2122111 0 0111111222 344445555555543 355677778888888
Q ss_pred HHHHhCCC-eEEeeCC-CCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEec
Q 014163 356 EGLEKTGR-FEILSKD-VGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 356 ~~L~~~~~-~~~~~~~-~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
+.|+++.. +.++... ....++.+.+.+.. .+....+.+.+.++|+.+.. .+...+|++..
T Consensus 321 ~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~~----~~~a~~i~~~l~~~Gvlv~~------~g~~~lRl~Pp 382 (408)
T PRK04612 321 AGLEALNAEFGVFAQVRGRGLMLGAVLAPAH----AGQAGAILDLAAEHGLLLLQ------AGPDVLRFVPA 382 (408)
T ss_pred HHHHHHHhhCCCeeeeeccceEEEEEecCch----hhHHHHHHHHHHHCCeEEee------CCCCEEEEcCC
Confidence 88876521 2222221 12334555543211 12233344444499988753 13356898753
No 310
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.33 E-value=6.6e-10 Score=110.35 Aligned_cols=333 Identities=11% Similarity=-0.018 Sum_probs=172.3
Q ss_pred CCCCCcccccccc----CCChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchH
Q 014163 53 DGNPRLNLASFVT----TWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (429)
Q Consensus 53 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~ 128 (429)
+|+.++.+.++.. ...+|.+.+++.+.++.-..... .....+.+.++.+.+.+++.-.. ....++++|+|
T Consensus 40 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~-~~~~~~~~~~la~~l~~~~p~~~-----~~v~f~~sGse 113 (423)
T PRK05964 40 DGRELIDAISSWWVATHGHNHPYIDQAIREQLDRLDHVIF-AGFTHEPAERLAQRLVALTPGGL-----DHVFFSDSGSV 113 (423)
T ss_pred CCCEEEEcchhHHhccCCCCCHHHHHHHHHHHhhCCCccc-cccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCCcHH
Confidence 4555444443322 23468888888877765321111 01122344466677887763211 13889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCC-CchHHHHHHHhcCc------------eeEEEeccCCc-cccCHHH
Q 014163 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGAN-VQVCWEKFARYFEV------------ELKEVKLEEGY-YVMNPVK 194 (429)
Q Consensus 129 a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~-~h~s~~~~~~~~G~------------~v~~v~~~~~~-~~~d~~~ 194 (429)
|+..|++.++.....+ |. .++.+|+.-.. .|....-+....+- .+..++...++ ...+++.
T Consensus 114 A~e~A~klar~~~~~~----~~-~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 188 (423)
T PRK05964 114 AVEVALKMALQYWRNR----GE-PGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDA 188 (423)
T ss_pred HHHHHHHHHHHHHHhc----CC-CCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHH
Confidence 9999999998642211 11 12345665444 44432222221111 13344432211 1233788
Q ss_pred HHHHhhh---CCeEEEEee-CCCccccc----cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccc-cCC
Q 014163 195 AVELVDE---NTICVAAIL-GSTLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRL 265 (429)
Q Consensus 195 l~~~i~~---~~~~v~~~~-~~~~tG~~----~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~~ 265 (429)
+++.+.+ +..+|++.- .....|.. +.+++|.++|++| |+++++|++|.++.. ...-+... +++
T Consensus 189 l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~------g~llI~DEv~tg~gr--~G~~~a~~~~~v 260 (423)
T PRK05964 189 LEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRH------GVLLIFDEIATGFGR--TGTLFACEQAGV 260 (423)
T ss_pred HHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc--CcchhHHHhcCC
Confidence 8888864 234444433 24445654 3499999999999 999999999976421 11000001 122
Q ss_pred CCeeEEEEcCcccCCCC-CCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHH
Q 014163 266 PLVKSINVSGHKYGLVY-AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIM 344 (429)
Q Consensus 266 ~~~d~~~~s~hK~~~~p-~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~ 344 (429)
..|.++++ |++.++ ..+|.++.++ +.. +.+...... ....-..++ +-+.....+..++++.+..+ ...
T Consensus 261 -~pDi~~~~--K~l~gG~~p~~av~~~~-~i~-~~~~~~~~~-~~~~~~~T~--~~np~~~aaa~a~l~~l~~~---~~~ 329 (423)
T PRK05964 261 -SPDIMCLS--KGLTGGYLPLAATLCTA-EIF-EAFYSDDRA-KAFMHSPSY--TANPLACAAANASLDLFEDE---PVL 329 (423)
T ss_pred -CCCeeeee--hhhhcCcccceEEEEcH-HHH-HhhhcCCcc-cccccCCCC--CcCHHHHHHHHHHHHHHHhc---CHH
Confidence 36776654 887666 5778877643 221 221110000 000000011 11123444455556555433 456
Q ss_pred HHHHHHHHHHHHHHHhCCCeEEeeC-CCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEE
Q 014163 345 ENCMGNARALREGLEKTGRFEILSK-DVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVI 423 (429)
Q Consensus 345 ~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~ 423 (429)
++..++.+++.+.|+++..+..+.+ .....++.+.+.+.. . .+....+.++|.++|+.+... + ..+|++
T Consensus 330 ~~~~~~g~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~~~~-~--~~~~~~l~~~l~~~Gv~v~~~------~-~~lR~~ 399 (423)
T PRK05964 330 ERVAALSAGLAEGLEPFRDLPGVADVRVLGAIGAVELDRPV-L--ERDGPALRAFALERGVLLRPL------G-NTIYLM 399 (423)
T ss_pred HHHHHHHHHHHHHHHhhccCCCeEEeecccEEEEEEeccCc-c--hhHHHHHHHHHHHCCeEEEec------C-CEEEEe
Confidence 7778888888888877633322222 113445667664321 0 123344445555999987531 1 358988
Q ss_pred ec
Q 014163 424 SH 425 (429)
Q Consensus 424 ~~ 425 (429)
.+
T Consensus 400 p~ 401 (423)
T PRK05964 400 PP 401 (423)
T ss_pred CC
Confidence 64
No 311
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.31 E-value=4.7e-10 Score=111.40 Aligned_cols=308 Identities=15% Similarity=0.037 Sum_probs=163.7
Q ss_pred CCCCCccccccccC----CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhC-CCCCCCCCCCceEeCCch
Q 014163 53 DGNPRLNLASFVTT----WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFN-TPVADDKTAVGVGTVGSS 127 (429)
Q Consensus 53 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g-~~~~~~~~~~~~~t~g~t 127 (429)
+++..+++.++++. ..+|.+.+++.+.++.....+.. ...+.++.+++++++. .+ ...++++|+
T Consensus 48 dG~~~lD~~~g~~~~~lGh~~p~i~~a~~~~~~~~~~~~~~----~~~~~~la~~L~~~~~~~~-------~v~~~~sGs 116 (426)
T PRK00062 48 DGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEKGLSFGAP----TELEVELAELVIELVPSIE-------MVRMVNSGT 116 (426)
T ss_pred CCCEEEEcccchhhhhcCCCCHHHHHHHHHHHHhCCcCCCC----CHHHHHHHHHHHHhCCCCC-------EEEEecCHH
Confidence 45555555554332 35678888888777653221112 2334466677777652 22 278999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHH-HhcC-------ce-----eEEEeccC-CccccCHH
Q 014163 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA-RYFE-------VE-----LKEVKLEE-GYYVMNPV 193 (429)
Q Consensus 128 ~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~-~~~G-------~~-----v~~v~~~~-~~~~~d~~ 193 (429)
+|+..+++.++.. . +++.|+..+.+|+.+...+ ...| .. ...++... ..-.-|++
T Consensus 117 eA~e~Aik~a~~~-~----------g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 185 (426)
T PRK00062 117 EATMSAIRLARGY-T----------GRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLE 185 (426)
T ss_pred HHHHHHHHHHHHH-h----------CCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHH
Confidence 9999999998763 1 1346776665554433211 1111 00 00010000 00013789
Q ss_pred HHHHHhhh---CCeEEEEeeCCCccccccC----hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccc-cCC
Q 014163 194 KAVELVDE---NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRL 265 (429)
Q Consensus 194 ~l~~~i~~---~~~~v~~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~~ 265 (429)
++++.++. ++.+|++.......|.+.+ +++|.++|++| ++++++|++|.++. ........ +++
T Consensus 186 ~l~~~i~~~~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~------~~llI~DEv~~G~r---~g~~~~~~~~~~ 256 (426)
T PRK00062 186 AVEELFEEYGDEIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEH------GALLIFDEVMTGFR---VALGGAQGYYGV 256 (426)
T ss_pred HHHHHHHhCCCcEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeechhccc---cCCccHHHHhCC
Confidence 99998864 4566776655566788877 99999999999 99999999998641 11111011 121
Q ss_pred CCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccc-cCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHH
Q 014163 266 PLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFH-INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIM 344 (429)
Q Consensus 266 ~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~ 344 (429)
..|.++ ..|.+.+++.+|+++.++ +. .+.+... ..+... ++.+.+ ....+..++|+.+..+ +..
T Consensus 257 -~pDi~~--~gK~l~~G~p~ga~~~~~-~i-~~~~~~~~~~~~~~-----T~~~~p--~~~aaa~a~L~~~~~~---~~~ 321 (426)
T PRK00062 257 -TPDLTT--LGKIIGGGLPVGAFGGRR-EI-MEQLAPLGPVYQAG-----TLSGNP--LAMAAGLATLKLLKEP---GFY 321 (426)
T ss_pred -CcchHh--hhhHhhCCCcceeeeEHH-HH-HHhhccCCCceecc-----cCcCCH--HHHHHHHHHHHHHhcc---hHH
Confidence 245433 347766667678876643 22 2222110 011110 111222 3344455566655433 355
Q ss_pred HHHHHHHHHHHHHHHh----CCCeEEeeCCCCceEEEEEecCCCCC-------CHHHHHHHHHHHHhccCceecc
Q 014163 345 ENCMGNARALREGLEK----TGRFEILSKDVGVPLVAFSLKDSSAH-------TVFEISEGLRKKLNRFQVVYPQ 408 (429)
Q Consensus 345 ~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~v~f~~~~~~~~-------~~~~~~~~L~~~l~~~G~~~~~ 408 (429)
++..++.+++++.|++ .+ +..-... ...++.+.+.++... .....+..+.+.+.++|+.+..
T Consensus 322 ~~~~~~~~~~~~~l~~~~~~~~-~~~~vrg-~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv~v~~ 394 (426)
T PRK00062 322 EELEALTKRLAEGLKEAAKKAG-IPLTVNR-VGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLDEGVYLAP 394 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHcC-CceEEEE-ecceEEEEEecCCCcchhhhccccHHHHHHHHHHHHHCCeEeec
Confidence 6666666666666653 44 3221112 345555555321100 0113334555555599988754
No 312
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.29 E-value=1.7e-10 Score=108.75 Aligned_cols=272 Identities=16% Similarity=0.107 Sum_probs=173.6
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCCCCceEeCCc-hHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHh
Q 014163 95 ELQNRCVNMIAHLFNTPVADDKTAVGVGTVGS-SEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARY 173 (429)
Q Consensus 95 ~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~-t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~ 173 (429)
.|-..+...+-+..|++.- ....++..+ -+++.+++.+++.+ . ....|+.+...|.+-.+++..
T Consensus 56 ~ltn~l~~d~~~~~G~~~~----~~~~~vP~atgm~l~l~l~~l~~r-~----------~a~~Viw~ridqkSc~kai~~ 120 (389)
T PF05889_consen 56 KLTNSLVLDALRLAGLRSV----KSCFVVPMATGMSLTLCLLALRMR-P----------KAKYVIWPRIDQKSCFKAIER 120 (389)
T ss_dssp HHHHHHHHHHHHHTTHTTH----CEEEEESS-HHHHHHHHHHHHHHH-C----------T--EEEEEEEETHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCccc----cceEEEecccccHHHHHHHHHhcc-c----------CCceEEEeeccccchHHHHHh
Confidence 3344444445566888741 113455444 34555666666522 1 124899999999999999999
Q ss_pred cCceeEEEec--cCCccccCHHHHHHHhhh---CCeEEEEeeCCCcccccc-ChHHHHHHHHHhhhccCCCccEEeeccc
Q 014163 174 FEVELKEVKL--EEGYYVMNPVKAVELVDE---NTICVAAILGSTLTGEFE-DVKLLHDLLTKKNEETGWDTPIHVDAAS 247 (429)
Q Consensus 174 ~G~~v~~v~~--~~~~~~~d~~~l~~~i~~---~~~~v~~~~~~~~tG~~~-~l~~I~~la~~~~~~~~~~~~l~vD~a~ 247 (429)
.|++++.||. .++.-..|.+.+++++++ ++.+.++++.+-..+... ++++|+++|++| |++.++.+||
T Consensus 121 AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~------~IPhlvNnAY 194 (389)
T PF05889_consen 121 AGLEPVVVENVLEGDELITDLEAIEAKIEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEY------DIPHLVNNAY 194 (389)
T ss_dssp TT-EEEEE-EEEETTEEEEHHHHHHHHHHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHH------T--EEEEGTT
T ss_pred cCCeEEEeeccCCCCeeeccHHHHHHHHHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHc------CCceEEccch
Confidence 9999999985 344457789999998875 457788888888888884 499999999999 9999999999
Q ss_pred ccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHH
Q 014163 248 GGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIA 327 (429)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~ 327 (429)
+-..... ....+.-....++|.++-+.-|-++.|.|-+.+...++..+. .....|.+. -+....+-
T Consensus 195 gvQ~~~~-~~~i~~a~~~GRvda~vqS~dkNF~VPvGgai~As~~~~~i~---~vs~~YpGR----------as~sp~ld 260 (389)
T PF05889_consen 195 GVQSSKC-MHLIQQAWRVGRVDAFVQSTDKNFMVPVGGAIMASFDPSGIL---AVSKEYPGR----------ASASPSLD 260 (389)
T ss_dssp TTT-HHH-HHHHHHHHHHSTCSEEEEEHHHHHCEESSHEEEEESSHHHHH---HHHHTSHSH----------BTSHHHHH
T ss_pred hhhHHHH-HHHHHHHHhcCCcceeeeecCCCEEecCCCcEEEecCHHHHH---HHHHHhhhh----------hhcccchH
Confidence 8632100 000000112347999999999999999998887765543221 122334432 22245666
Q ss_pred HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCC---CeEEeeCCCCceEEEEEecCCCC---CCHHHHHHHHHHHHhc
Q 014163 328 QYYQFIRLGFEGYKNIMENCMGNARALREGLEKTG---RFEILSKDVGVPLVAFSLKDSSA---HTVFEISEGLRKKLNR 401 (429)
Q Consensus 328 ~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~~~~v~f~~~~~~~---~~~~~~~~~L~~~l~~ 401 (429)
....+..+|..++...+....++-.++.++|++.. +-.+...|...-.+.|....-.. .+...+..+|. .
T Consensus 261 ~~itLl~LG~~g~~~ll~~r~~~f~~l~erl~~~aee~~e~ll~~p~N~is~a~tl~~l~~~~~k~~~~lgs~Lf----~ 336 (389)
T PF05889_consen 261 LFITLLSLGCTGYGALLKERKASFPYLKERLKKWAEEVGERLLETPRNHISMAFTLDTLYEISQKDGTFLGSMLF----K 336 (389)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEBSSSTT-SSEEEEE-TTCCTCCSSHHHHHHHHHH----H
T ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCeeEEEECccchhhccchhhhHHHHHH----h
Confidence 77888889999999999999998888888887532 24444433223345666543211 23456677777 7
Q ss_pred cCce
Q 014163 402 FQVV 405 (429)
Q Consensus 402 ~G~~ 405 (429)
+|+.
T Consensus 337 R~Vs 340 (389)
T PF05889_consen 337 RGVS 340 (389)
T ss_dssp TTEE
T ss_pred CCcc
Confidence 7764
No 313
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.29 E-value=3.7e-09 Score=105.19 Aligned_cols=309 Identities=12% Similarity=-0.024 Sum_probs=162.6
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
+.+|.+.+++.+.+...... .......+.+.++.+.|.+++.-+.. ....++++||||+..|++.++..
T Consensus 70 h~~p~v~~Ai~~ql~~~~~~-~~~~~~~~~~~~lAe~L~~~~p~~~~----~~v~f~~SGsEA~e~AlklAr~~------ 138 (441)
T PRK05769 70 HAHPKVVKAVKEQAEKFLHY-SLTDFYYEPAVELAERLVEIAPGGFE----KKVFFTNSGTESNEAAIKIARYH------ 138 (441)
T ss_pred CCCHHHHHHHHHHHHhccCc-cCcccCCHHHHHHHHHHHHhCCCCCC----CEEEECCchHHHHHHHHHHHHHH------
Confidence 34688888887777643211 11111233445677778877642110 13889999999999999999863
Q ss_pred hcCCCCCCcEEEEcCC-CchHHHHHHHhcCc-------------eeEEEeccCCccc-------------cCHHHHHH-H
Q 014163 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFEV-------------ELKEVKLEEGYYV-------------MNPVKAVE-L 198 (429)
Q Consensus 147 ~~g~~~~~~~vi~~~~-~h~s~~~~~~~~G~-------------~v~~v~~~~~~~~-------------~d~~~l~~-~ 198 (429)
. +++.|+.-.. .|....-+....|. ++..+|.... .+ -+++.+++ .
T Consensus 139 -t----gr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~le~~~ 212 (441)
T PRK05769 139 -T----GRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNP-YRNPWGIENPEECGNAVLDFIEDYL 212 (441)
T ss_pred -h----CCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCcc-ccccccCCchHHHHHHHHHHHHHHH
Confidence 1 2345665444 45433333222221 1333433210 11 12344666 3
Q ss_pred hh-----hCCeEEEEeeCCCccccccC----hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCc-cccCCCCe
Q 014163 199 VD-----ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDFRLPLV 268 (429)
Q Consensus 199 i~-----~~~~~v~~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~~~~~ 268 (429)
++ ++..+|++--.....|.+.| +++|.++|++| |+++++|+++.++.- ...-+. ..+++ ..
T Consensus 213 ~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~------g~lli~DEv~tG~gr--~G~~~a~~~~gv-~p 283 (441)
T PRK05769 213 FKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKY------GILLIDDEVQTGMGR--TGKMFAIEHFGV-EP 283 (441)
T ss_pred HhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc--ccceehhhccCC-CC
Confidence 32 23445555444455677777 99999999999 999999999986321 110000 01122 25
Q ss_pred eEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHH
Q 014163 269 KSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCM 348 (429)
Q Consensus 269 d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~ 348 (429)
|.++++ |.+.++..+|.++.+++ .. ... .... .. ++.+.+ ....+..++|+.+.+ +..++..
T Consensus 284 Divt~~--K~l~~G~p~gav~~~~~-i~-~~~---~~~~---~~--T~~g~p--~~~aaa~a~L~~l~~----~~~~~~~ 345 (441)
T PRK05769 284 DIITLA--KAIAGGLPLGAVIGRAE-LM-FLP---PGSH---AN--TFGGNP--VAAAAALATLEELEE----GLLENAQ 345 (441)
T ss_pred CEEEEc--ccccCCcccEEEEEehh-hh-hcC---CCCC---CC--CCCcCH--HHHHHHHHHHHHHHH----HHHHHHH
Confidence 777653 65556677888777643 22 111 1011 11 111221 334444455555433 5567777
Q ss_pred HHHHHHHHHHHhCCC-eEEeeCCC-CceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEec
Q 014163 349 GNARALREGLEKTGR-FEILSKDV-GVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 349 ~~~~~l~~~L~~~~~-~~~~~~~~-~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
++.++|++.|+++.. ..++.... ...++.+.+.........++...+.+++.++|+.+.. .+...+|++..
T Consensus 346 ~~g~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Gil~~~------~~~~~lr~~p~ 418 (441)
T PRK05769 346 KLGEYLRKELKELKEKYEFIGDVRGLGLMIGVELVKDRKEPDPKLRDKVLYEAFKRGLLLLG------AGKSAIRIIPP 418 (441)
T ss_pred HHHHHHHHHHHHHHHhCCCeeeeecceEEEEEEeccCCccccHHHHHHHHHHHHhCCcEEec------CCCCEEEEeCC
Confidence 788888888876421 22222211 2345555553221111123455555566699988753 13355888753
No 314
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.28 E-value=2.1e-09 Score=107.10 Aligned_cols=325 Identities=13% Similarity=0.016 Sum_probs=169.5
Q ss_pred CCCCCcccccccc----CCChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchH
Q 014163 53 DGNPRLNLASFVT----TWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (429)
Q Consensus 53 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~ 128 (429)
+|+.++++.++.. ...+|.+.+++.+.+++-...... ....+.+.++.+.|++++.-.. ....++++|+|
T Consensus 41 dG~~ylD~~~g~~~~~lGh~~p~v~~a~~~q~~~~~~~~~~-~~~~~~~~~la~~L~~~~~~~~-----~~v~f~~SGse 114 (433)
T PRK08117 41 DGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSG-VIYYESILKLAEELAEITPGGL-----DCFFFSNSGAE 114 (433)
T ss_pred CCCEEEECCcchhhccCCCCCHHHHHHHHHHHHhccCcccc-ccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCcHHH
Confidence 4555444444422 235688888888777653221110 1122344566667888763111 13789999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEE-cCCCchHHHHHHHhcC-------------ceeEEEeccCCccc-----
Q 014163 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVT-GANVQVCWEKFARYFE-------------VELKEVKLEEGYYV----- 189 (429)
Q Consensus 129 a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~-~~~~h~s~~~~~~~~G-------------~~v~~v~~~~~~~~----- 189 (429)
|+..|++.++.. . +++.|+. ....|.+..-+....+ -.+..+|.... ++
T Consensus 115 A~e~AlklAr~~-------t----gr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 182 (433)
T PRK08117 115 AIEGALKLAKHV-------T----KRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYC-DRCPKGE 182 (433)
T ss_pred HHHHHHHHHHHh-------c----CCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCcc-ccccccC
Confidence 999999988753 1 2345554 4455654433322211 01234443211 11
Q ss_pred -------cCHHHHHHHhhh-----CCeEEEEeeCCCccccccC----hHHHHHHHHHhhhccCCCccEEeeccccccccc
Q 014163 190 -------MNPVKAVELVDE-----NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAP 253 (429)
Q Consensus 190 -------~d~~~l~~~i~~-----~~~~v~~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~ 253 (429)
-|++++++.++. +..+|++--.....|.+-| +++|.++|++| |+++++|++|.++..
T Consensus 183 ~~~~~~~~~~~~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~------g~llI~DEv~tG~gr- 255 (433)
T PRK08117 183 DPEVCFLECLRDLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRH------GILLIFDEVQTGFGR- 255 (433)
T ss_pred chhHHHHHHHHHHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHc------CCEEEEecchhccCc-
Confidence 156677777652 3445555544555677777 99999999999 999999999986421
Q ss_pred ccCCCCc-cccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHH
Q 014163 254 FLYPDLE-WDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (429)
Q Consensus 254 ~~~~~~~-~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al 332 (429)
....+. ..+++ ..|.+ +.-|.+.++..+|+++.+++ .. +.+. ... ...++.+ +.....+..+++
T Consensus 256 -~G~~~~~~~~gv-~pDi~--t~sK~lg~G~pigav~~~~~-i~-~~~~--~~~-----~~~T~~~--np~~~aaa~a~L 320 (433)
T PRK08117 256 -TGEWFAAQTFGV-VPDIM--TIAKGIASGLPLSAVVASKE-LM-EQWP--LGS-----HGTTFGG--NPVACAAALATL 320 (433)
T ss_pred -cccchhHhhcCC-CCCEe--ehhhhccCCCcceeEEEcHH-HH-hhcc--CCC-----CCCCCCc--CHHHHHHHHHHH
Confidence 111000 01122 24543 44577767677888877542 21 2111 000 0111112 123444455566
Q ss_pred HHcCHHHHHHHHHHHHHHHHHHHHHHHhCCC-eEEeeCCCCc-eEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccC
Q 014163 333 IRLGFEGYKNIMENCMGNARALREGLEKTGR-FEILSKDVGV-PLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKL 410 (429)
Q Consensus 333 ~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~~~~~-~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~ 410 (429)
+.+..+ ...++..++.+++.+.|.++.. ..++...... -++.+.+.++......+....+.+++.++|+.+...
T Consensus 321 ~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~- 396 (433)
T PRK08117 321 EVIKEE---KLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLC- 396 (433)
T ss_pred HHHHhc---cHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEeec-
Confidence 555333 4556667777778777776421 1122211122 234455532211111233444555555999886532
Q ss_pred CCCCCCceEEEEEe
Q 014163 411 PMSYPWSTKLRVIS 424 (429)
Q Consensus 411 ~~~~~~~~~lRi~~ 424 (429)
. .....+|++.
T Consensus 397 --g-~~~~~lRl~p 407 (433)
T PRK08117 397 --G-NAGNVLRMIP 407 (433)
T ss_pred --C-CCCCEEEEeC
Confidence 1 1245699884
No 315
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.28 E-value=3e-09 Score=106.10 Aligned_cols=311 Identities=11% Similarity=-0.020 Sum_probs=163.1
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
..+|.+.+++.+.+++-.. +.......+...++.+.+++++..... ....++++|+||+..|++.++.. .
T Consensus 72 h~~p~v~~ai~~q~~~~~~-~~~~~~~~~~~~~la~~l~~~~p~~~~----~~v~f~~sGseA~e~AlklAr~~-t---- 141 (443)
T PRK06058 72 NSAPRVVEAVREQVARFTH-TCFMVTPYEGYVAVAEQLNRLTPGDHE----KRSALFNSGAEAVENAVKIARSY-T---- 141 (443)
T ss_pred CCCHHHHHHHHHHHHhccC-ccccccCCHHHHHHHHHHHHhCCCCCC----CEEEEeCCcHHHHHHHHHHHHHh-h----
Confidence 4568888888877765221 111112234445677778887643210 13788999999999999998753 1
Q ss_pred hcCCCCCCcEEEEcCCC-chHHHHHHHhcC--------c-----eeEEEeccCCccc------c--------CHHHHHHH
Q 014163 147 EQGKPYDKPNIVTGANV-QVCWEKFARYFE--------V-----ELKEVKLEEGYYV------M--------NPVKAVEL 198 (429)
Q Consensus 147 ~~g~~~~~~~vi~~~~~-h~s~~~~~~~~G--------~-----~v~~v~~~~~~~~------~--------d~~~l~~~ 198 (429)
+++.|+....+ |.....+....+ . .+..+|.... ++ . ..+.+++.
T Consensus 142 ------gr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~ 214 (443)
T PRK06058 142 ------GRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYP-YRDPKGLATDGEEAAARAITVIEKQ 214 (443)
T ss_pred ------CCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcc-cccccccccchHHHHHHHHHHHHHh
Confidence 23566665554 443333332221 1 1223332110 11 0 12334444
Q ss_pred hh-hCCeEEEEeeCCCcc-ccccC----hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc-ccCCCCeeEE
Q 014163 199 VD-ENTICVAAILGSTLT-GEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSI 271 (429)
Q Consensus 199 i~-~~~~~v~~~~~~~~t-G~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~d~~ 271 (429)
+. +++.+|+ .-|-... |.+-| +++|.++|++| |+++++|+++.|+.- ....+.. .+++ ..|.+
T Consensus 215 ~~~~~iAavi-~EPi~g~gG~~~p~~~yl~~lr~lc~~~------gillI~DEV~tGfgR--tG~~fa~~~~gv-~PDiv 284 (443)
T PRK06058 215 VGADNLAAVI-IEPIQGEGGFIVPAEGFLPALLEWCREN------GVVFIADEVQTGFAR--TGAWFACEHEGI-VPDLI 284 (443)
T ss_pred hCCCceEEEE-ECCccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--ChhhhHHHhcCC-CCCEE
Confidence 43 3344444 4444443 44433 89999999999 999999999976421 1111101 1122 35777
Q ss_pred EEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Q 014163 272 NVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNA 351 (429)
Q Consensus 272 ~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~ 351 (429)
+++ |.+.+++.+|.++.+++ .. +.+.. ... ..++.|.+ ....+..++|+.+.++ +..++..++.
T Consensus 285 ~~g--K~l~~G~Pi~av~~~~~-i~-~~~~~--~~~-----~~T~~gnp--l~~aaa~a~L~~~~~~---~l~~~~~~~g 348 (443)
T PRK06058 285 TTA--KGIAGGLPLSAVTGRAE-IM-DAPHP--GGL-----GGTYGGNP--VACAAALAAIETIEED---DLVARARQIE 348 (443)
T ss_pred EEc--ccccCCCccEEEEEcHH-HH-hhccC--CCC-----CCCCCCCH--HHHHHHHHHHHHHHHc---CHHHHHHHHH
Confidence 764 77667778888887542 22 22110 000 01111111 3344444555554433 4566677778
Q ss_pred HHHHHHHHhCC-CeEEeeC-CCCceEEEEEecCCC-CCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEe
Q 014163 352 RALREGLEKTG-RFEILSK-DVGVPLVAFSLKDSS-AHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVIS 424 (429)
Q Consensus 352 ~~l~~~L~~~~-~~~~~~~-~~~~~~v~f~~~~~~-~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~ 424 (429)
++|.+.|+++. ...++.. .....++.+.+.++. .....++...+.+++.++|+.+....+ ....||+..
T Consensus 349 ~~l~~~L~~l~~~~~~i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~~~~~~~----~~~~lr~~P 420 (443)
T PRK06058 349 ALMTDRLRALAAEDDRIGDVRGRGAMIAIELVKPGTTEPDAELTKALAAAAHAAGVIVLTCGT----YGNVIRLLP 420 (443)
T ss_pred HHHHHHHHHHHhhCCcEEeeeccceEEEEEEecCCCCCCcHHHHHHHHHHHHHCCeEEeccCC----CCCEEEEEC
Confidence 88888887642 1222221 113445556553321 112235667777777799998754211 124688853
No 316
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.26 E-value=4.5e-10 Score=106.00 Aligned_cols=190 Identities=18% Similarity=0.142 Sum_probs=128.4
Q ss_pred CChHHHHHHHHHHcCcCCC-CCcc--ChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYV-DMDE--YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~ 143 (429)
...+++.+++....+.... .+.. +.....+. .+...++.+.|.. .+.+++..+.|++..+.++...
T Consensus 38 ~~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~-~~~~~~~~~~~ae-------a~~ivnnn~aAVll~~~al~~~--- 106 (395)
T COG1921 38 LYSPEAIEAMKEAMRAPVELETDLKTGKRGARLT-ELAELLCGLTGAE-------AAAIVNNNAAAVLLTLNALAEG--- 106 (395)
T ss_pred cCCHHHHHHHHHHhcccceeeeecccchhhHHHH-HHHHHHhcccchh-------heeeECCcHHHHHHHHhhhccC---
Confidence 3457777777666655322 2221 11112221 3333344444443 3888888888888777776531
Q ss_pred HHHhcCCCCCCcEEEEcC-----CCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccc
Q 014163 144 KRKEQGKPYDKPNIVTGA-----NVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEF 218 (429)
Q Consensus 144 ~~~~~g~~~~~~~vi~~~-----~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~ 218 (429)
.+++++. ..|+.+...++..|++++.+... .+-...+++.+|.++|.++.-++.+|. |..
T Consensus 107 -----------~EvVis~g~lV~gg~~~v~d~~~~aG~~l~EvG~t---n~t~~~d~~~AIne~ta~llkV~s~~~-~f~ 171 (395)
T COG1921 107 -----------KEVVVSRGELVEGGAFRVPDIIRLAGAKLVEVGTT---NRTHLKDYELAINENTALLLKVHSSNY-GFT 171 (395)
T ss_pred -----------CeEEEEccccccCCCCChhHHHHHcCCEEEEeccc---CcCCHHHHHHHhccCCeeEEEEeeccc-ccc
Confidence 2455432 58899999999999999888643 457899999999999998888888875 443
Q ss_pred --cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeC
Q 014163 219 --EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRT 292 (429)
Q Consensus 219 --~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~ 292 (429)
-++++++++||++ ++++++|.+.|.-.- ..+..+ .+-..++|.+++|++|.+.+|. .|+++.|+
T Consensus 172 ~~l~~~~l~~ia~~~------~lpvivD~aSg~~v~--~e~~l~-~~la~GaDLV~~SgdKllgGPq-aGii~GkK 237 (395)
T COG1921 172 GMLSEEELVEIAHEK------GLPVIVDLASGALVD--KEPDLR-EALALGADLVSFSGDKLLGGPQ-AGIIVGKK 237 (395)
T ss_pred ccccHHHHHHHHHHc------CCCEEEecCCccccc--cccchh-HHHhcCCCEEEEecchhcCCCc-cceEechH
Confidence 3678899999999 999999999985221 111111 1123479999999999998877 68877654
No 317
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.26 E-value=5.6e-09 Score=103.80 Aligned_cols=312 Identities=11% Similarity=-0.005 Sum_probs=153.5
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
..+|.+.+++.+.++......... .......++.+++.++.+.+.. ....++++|++|+..|++.++.. .
T Consensus 57 h~~~~i~~a~~~~~~~~~~~~~~~-~~~~~~~~la~~l~~~~~~~~~----~~~~f~~sGsea~e~Alklar~~-~---- 126 (425)
T PRK08088 57 HLHPKVVAAVEAQLKKLSHTCFQV-LAYEPYLELCEKMNQKVPGDFA----KKTLLVTTGSEAVENAVKIARAA-T---- 126 (425)
T ss_pred CCCHHHHHHHHHHHhhCCCccccc-cCCHHHHHHHHHHHHhCCCCCC----CEEEEeCCcHHHHHHHHHHHHHH-h----
Confidence 346778888888776533211111 1112233667778887764321 13789999999999999998653 1
Q ss_pred hcCCCCCCcEE-EEcCCCchHHHHHHHhcCc-------------eeEE--EeccCCcccc--CHHHHHHHhh-----hCC
Q 014163 147 EQGKPYDKPNI-VTGANVQVCWEKFARYFEV-------------ELKE--VKLEEGYYVM--NPVKAVELVD-----ENT 203 (429)
Q Consensus 147 ~~g~~~~~~~v-i~~~~~h~s~~~~~~~~G~-------------~v~~--v~~~~~~~~~--d~~~l~~~i~-----~~~ 203 (429)
+++.| .+....|....-+....+- .+.. +|.+.++... +++.|+++++ ++.
T Consensus 127 ------~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 200 (425)
T PRK08088 127 ------KRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDI 200 (425)
T ss_pred ------CCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCccccCccHHHHHHHHHHHHHhccCCCce
Confidence 12344 4544455543333222111 0111 2222111111 1566888886 233
Q ss_pred eEEEEeeCCCccccccC----hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc-ccCCCCeeEEEEcCccc
Q 014163 204 ICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHKY 278 (429)
Q Consensus 204 ~~v~~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~d~~~~s~hK~ 278 (429)
.+|++.-....-|.+-+ +++|.++|++| ++++++|++|.++.. ...-... ..+. ..|.. +.-|.
T Consensus 201 aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~------~~~lI~Dev~~g~g~--~g~~~~~~~~~~-~pdi~--s~sK~ 269 (425)
T PRK08088 201 AAIIIEPVQGEGGFYAASPAFMQRLRALCDEH------GIMLIADEVQTGAGR--TGTLFAMEQMGV-AADLT--TFAKS 269 (425)
T ss_pred EEEEECcccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--CcchhHHhhcCC-CCCEE--EEecc
Confidence 44444433334455544 89999999999 999999999986321 1110011 1111 24433 33577
Q ss_pred CCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH
Q 014163 279 GLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGL 358 (429)
Q Consensus 279 ~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L 358 (429)
+.+++++|+++.+.+ +.+.+... ....++ + ...+.+.+++..+..-..+++.++.++..+++.+.|
T Consensus 270 l~~G~rig~v~~~~~--~~~~~~~~-------~~~~t~--~---~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l 335 (425)
T PRK08088 270 IAGGFPLAGVTGRAE--VMDAIAPG-------GLGGTY--A---GNPIACAAALAVLKVFEQENLLQKANALGEKLKDGL 335 (425)
T ss_pred ccCCCcceeeEecHH--HHhhcCCC-------CCCCCC--C---cCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 777888999987532 21221110 001111 1 122233333333322222344455555555555544
Q ss_pred H----hCCCeEEeeCCCCceEEEEEecCCCC--CCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEec
Q 014163 359 E----KTGRFEILSKDVGVPLVAFSLKDSSA--HTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 359 ~----~~~~~~~~~~~~~~~~v~f~~~~~~~--~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
. +.|.+..+.. ....+.+.+..... .........+.+++.++|+.+... . .....+|+++.
T Consensus 336 ~~l~~~~~~~~~v~g--~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~Gv~~~~~---~-~~~~~iRl~~~ 402 (425)
T PRK08088 336 LAIAEKHPEIGDVRG--LGAMIAIELFEDGDHSKPNAKLTAQIVARARDKGLILLSC---G-PYYNVLRILVP 402 (425)
T ss_pred HHHHHhCCCeEEEec--cceEEEEEEecCCCCCCCCHHHHHHHHHHHHhCCCEEecC---C-CCCCEEEEECC
Confidence 4 3443222222 23344555522100 011233455555555999876432 1 11356999876
No 318
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.26 E-value=5.4e-09 Score=104.03 Aligned_cols=310 Identities=11% Similarity=-0.023 Sum_probs=164.7
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
..+|.+.+++.+.+++....... ....+.+.++.+.|.++++... ....++++||||+..|++.++..
T Consensus 57 h~~p~v~~Ai~~ql~~~~~~~~~-~~~~~~~~~la~~L~~~~p~~~-----~~v~f~~sGsEAve~AlklAr~~------ 124 (443)
T PRK08360 57 HNNPRVVKAIKEQTDKLIHYTPI-YGFPVEPLLLAEKLIEIAPGDN-----PKVSFGLSGSDANDGAIKFARAY------ 124 (443)
T ss_pred CCCHHHHHHHHHHHHhccCcccc-ccCcHHHHHHHHHHHHhCCCCC-----CEEEEcCCHHHHHHHHHHHHHHh------
Confidence 35688888888777653221111 1122334466677777765432 13889999999999999998763
Q ss_pred hcCCCCCCcEEEEcC-CCchHHHHHHHhcCc------------eeEEEeccCC-c--cc--------cCHHHHHHHhh--
Q 014163 147 EQGKPYDKPNIVTGA-NVQVCWEKFARYFEV------------ELKEVKLEEG-Y--YV--------MNPVKAVELVD-- 200 (429)
Q Consensus 147 ~~g~~~~~~~vi~~~-~~h~s~~~~~~~~G~------------~v~~v~~~~~-~--~~--------~d~~~l~~~i~-- 200 (429)
. ++..|+.-. ..|.....+....|. .+..+|.... . +. -+++.+++.+.
T Consensus 125 -t----gr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 199 (443)
T PRK08360 125 -T----KRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGE 199 (443)
T ss_pred -c----CCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhc
Confidence 1 234565544 445433222222221 1334443210 0 00 23455666664
Q ss_pred ---hCCeEEEEeeCCCccccccC----hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc-ccCCCCeeEEE
Q 014163 201 ---ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSIN 272 (429)
Q Consensus 201 ---~~~~~v~~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~d~~~ 272 (429)
+++.+|++.-..+++|.+-+ +++|.++|++| |+++++|++|.++.. ....+.. .+++ ..|.++
T Consensus 200 ~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~------g~llI~DEv~~g~gr--~G~~~a~~~~~~-~pDiit 270 (443)
T PRK08360 200 VYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEH------GILLVVDEVQSGLGR--TGKWFAIEHFGV-EPDIIT 270 (443)
T ss_pred cCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--CccchhhhhcCC-CCCEEE
Confidence 34677777655688897744 89999999999 999999999986421 1111110 1122 246665
Q ss_pred EcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Q 014163 273 VSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNAR 352 (429)
Q Consensus 273 ~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~ 352 (429)
+ -|.+.+++++|+++.+.+ +.+.+.. ..+ ..++.+.+ ....+..++++.+..+ +..++..++.+
T Consensus 271 l--sK~l~~G~pigav~~~~~--i~~~~~~-~~~------~~T~~~~p--~~~aaa~a~l~~l~~~---~l~~~~~~~g~ 334 (443)
T PRK08360 271 L--GKPLGGGLPISATIGRAE--IMDSLPP-LAH------AFTLSGNP--VASAAALAVIEEIEEK---NLLKRAEKLGN 334 (443)
T ss_pred e--cccccCCceeEEEEEcHH--HHhhhcC-CCC------CCCCCcCH--HHHHHHHHHHHHHHHc---CHHHHHHHHHH
Confidence 4 576667778899887532 2222210 000 11111222 2344455555555443 35666777777
Q ss_pred HHHHHHHhCC-CeEEeeCC-CCceEEEEEecCCCC--CCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEe
Q 014163 353 ALREGLEKTG-RFEILSKD-VGVPLVAFSLKDSSA--HTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVIS 424 (429)
Q Consensus 353 ~l~~~L~~~~-~~~~~~~~-~~~~~v~f~~~~~~~--~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~ 424 (429)
+|++.|+++. ...++... ...-++.+.+..+.. ......+..+.+++.++|+.+... +...+|++.
T Consensus 335 ~l~~~L~~l~~~~~~v~~vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~------~~~~lr~~P 404 (443)
T PRK08360 335 YTKKRLEEMKKKHELIGDVRGIGLMIGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTFF------SGNVLRIQP 404 (443)
T ss_pred HHHHHHHHHHHhCCCeeeeeccceEEEEEEecCCcccCccHHHHHHHHHHHHHCCeEEeec------CCCEEEEeC
Confidence 7777776541 12222221 133455555532110 001123344555555999887531 124588854
No 319
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.25 E-value=5.9e-09 Score=105.05 Aligned_cols=337 Identities=13% Similarity=0.018 Sum_probs=171.2
Q ss_pred CCCCCccccccc----cCCChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchH
Q 014163 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (429)
Q Consensus 53 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~ 128 (429)
+|+.++++.++. -...+|.+.+++.+.+++-...........+.+.++.+.|.+++.-... ....++++|+|
T Consensus 87 dG~~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~~----~~v~f~~SGsE 162 (504)
T PLN02760 87 NGKKYLDALAGLWCTALGGSEPRLVAAATEQLNKLPFYHSFWNRTTKPSLDLAKELLEMFTARKM----GKVFFTNSGSE 162 (504)
T ss_pred CCCEEEEcCcCHHhcccCCCCHHHHHHHHHHHhhccceecccccCcHHHHHHHHHHHhhcCCCCC----CEEEEeCChHH
Confidence 455554444432 1245688888888887653221111112334445566667776432110 13788999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEE-EcCCCchHHHHHHHhcCce------------eEEEeccCCccc------
Q 014163 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIV-TGANVQVCWEKFARYFEVE------------LKEVKLEEGYYV------ 189 (429)
Q Consensus 129 a~~~al~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~~------------v~~v~~~~~~~~------ 189 (429)
|+..|++.++..... .|.. ++..|+ +....|.+...+....|.. +..++.... ++
T Consensus 163 A~e~AlKlAr~~~~~----~g~~-~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~ 236 (504)
T PLN02760 163 ANDTQVKLVWYYNNA----LGRP-NKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHY-WRFHLPGE 236 (504)
T ss_pred HHHHHHHHHHHHHHh----cCCC-CCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCCCcc-cccCCCCC
Confidence 999999999753211 1211 124455 4555666654444433321 122222110 11
Q ss_pred -------cCHHHHHHHhhh----CCeEEEEeeCCCccccccC----hHHHHHHHHHhhhccCCCccEEeecccccccccc
Q 014163 190 -------MNPVKAVELVDE----NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (429)
Q Consensus 190 -------~d~~~l~~~i~~----~~~~v~~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (429)
...++|++++.. +..+|++--.....|.+.| +++|.++|++| |+++|+|+++.|+.-
T Consensus 237 ~~~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~------g~lLI~DEV~TGfGR-- 308 (504)
T PLN02760 237 TEEEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKY------DILFIADEVICAFGR-- 308 (504)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEecchhhCCcc--
Confidence 113457777642 2345554444445577777 99999999999 999999999965421
Q ss_pred cCCCCcc-ccCCCCeeEEEEcCcccCCCCC-CeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHH
Q 014163 255 LYPDLEW-DFRLPLVKSINVSGHKYGLVYA-GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (429)
Q Consensus 255 ~~~~~~~-~~~~~~~d~~~~s~hK~~~~p~-g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al 332 (429)
...-+.. .+++ ..|.+++ -|.+.+++ .+|.++.++ +. .+.+.......+...-..++.|.+ ....+..++|
T Consensus 309 tG~~~a~e~~gv-~PDivtl--gK~lggG~~PigAv~~~~-~i-~d~~~~~~~~~~~~~h~~T~~gnP--l~~Aaala~L 381 (504)
T PLN02760 309 LGTMFGCDKYNI-KPDLVSL--AKALSSAYMPIGAVLVSP-EI-SDVIHSQSNKLGSFAHGFTYSGHP--VSCAVALEAL 381 (504)
T ss_pred cchhhHHHhcCC-CCcEEEe--cccccCCccccceEeecH-HH-HhhhhcccccccCcccCCCCCCCH--HHHHHHHHHH
Confidence 1111111 1122 2676554 36555542 456666653 22 222211100000000111222222 3444555566
Q ss_pred HHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCC-CCceEEEEEecCCCC----C-CHHHHHHHHHHHHhccCcee
Q 014163 333 IRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKD-VGVPLVAFSLKDSSA----H-TVFEISEGLRKKLNRFQVVY 406 (429)
Q Consensus 333 ~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~v~f~~~~~~~----~-~~~~~~~~L~~~l~~~G~~~ 406 (429)
+.+.++ +..++..++.++|++.|+++....++..- ....++.+.+..... . ...++...+.+++.++|+.+
T Consensus 382 e~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~ 458 (504)
T PLN02760 382 KIYKER---NIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLV 458 (504)
T ss_pred HHHHhC---CHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHHHHHHHhCCcEE
Confidence 655443 45777788888888888765322222211 123455665543211 0 11234555666666999987
Q ss_pred cccCCCCCCCceEEEEEe
Q 014163 407 PQKLPMSYPWSTKLRVIS 424 (429)
Q Consensus 407 ~~~~~~~~~~~~~lRi~~ 424 (429)
... + ..+|++.
T Consensus 459 ~~~------g-~~lrl~P 469 (504)
T PLN02760 459 RVA------G-DNIMMSP 469 (504)
T ss_pred Eec------C-CEEEEEC
Confidence 531 1 2478763
No 320
>PLN00144 acetylornithine transaminase
Probab=99.24 E-value=9.5e-09 Score=100.56 Aligned_cols=310 Identities=13% Similarity=-0.056 Sum_probs=159.1
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
..+|.+.+++.+.+++-...... ...+.+.++.+.+.++.+.+ ...++++||||+..|++.++.... ++
T Consensus 31 h~~p~v~~ai~~q~~~~~~~~~~--~~~~~~~~la~~l~~~~~~~-------~v~f~~sGseA~e~AlklAr~~~~-~~- 99 (382)
T PLN00144 31 HGDPDWVKAVAEQAGTLAHVSNV--YHTIPQVELAKRLVASSFAD-------RVFFCNSGTEANEAAIKFARKYQR-VR- 99 (382)
T ss_pred CCCHHHHHHHHHHHHhcCCcccc--ccCHHHHHHHHHHHhcCCCC-------eEEEeCCcHHHHHHHHHHHHHHHh-cc-
Confidence 44688888887777652211111 11233445666677765432 388999999999999999876321 11
Q ss_pred hcCCCCC------CcEEEEcC-CCchHHHHHHHhcCcee---EEEeccCCcc---ccCHHHHHHHhhh-CCeEEEEeeCC
Q 014163 147 EQGKPYD------KPNIVTGA-NVQVCWEKFARYFEVEL---KEVKLEEGYY---VMNPVKAVELVDE-NTICVAAILGS 212 (429)
Q Consensus 147 ~~g~~~~------~~~vi~~~-~~h~s~~~~~~~~G~~v---~~v~~~~~~~---~~d~~~l~~~i~~-~~~~v~~~~~~ 212 (429)
|...+ ++.|+.-. ..|....-+....+-.. .+.|..++.. .-|++.|++.+.. ++.+|++.-..
T Consensus 100 --~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi~eP~q 177 (382)
T PLN00144 100 --APDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLIQKGKTAAVFVEPVQ 177 (382)
T ss_pred --CCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhcCCCCeEEEEEcccc
Confidence 11100 34565544 45544333333222110 0111111000 1278999988864 45566655445
Q ss_pred Cccccc--cC--hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc-ccCCCCeeEEEEcCcccCCCCCCeEE
Q 014163 213 TLTGEF--ED--VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHKYGLVYAGVGW 287 (429)
Q Consensus 213 ~~tG~~--~~--l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~d~~~~s~hK~~~~p~g~g~ 287 (429)
++.|.. ++ +++|.++|++| |+++|+|++|.++.- ....+.. ..++ ..|.++ .-|.+.++..+|+
T Consensus 178 ~~gg~~~~~~~~~~~l~~l~~~~------g~llI~DEv~tg~gr--~g~~~~~~~~~~-~PDi~t--~sK~l~~G~pig~ 246 (382)
T PLN00144 178 GEGGIYPATKEFLQGLRALCDEA------GALLVFDEVQCGLGR--TGYLWAHEAYGV-EPDIMT--LAKPLAGGLPIGA 246 (382)
T ss_pred CCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc--cchHhhhhhcCC-CCCEEE--ecccccCCcceEE
Confidence 554443 34 89999999999 999999999986421 1111111 1122 245333 3587777788999
Q ss_pred EEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHH-HHHHHHHHHHhCCCeEE
Q 014163 288 VVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMG-NARALREGLEKTGRFEI 366 (429)
Q Consensus 288 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~-~~~~l~~~L~~~~~~~~ 366 (429)
++.+.+ . .+.+.. .. ...++.+++ ....+..++++.+....+.+.+++..+ +.+.+.+.+.+.|.+.-
T Consensus 247 v~~~~~-~-~~~~~~--~~-----~~~T~~~~p--l~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~~~~~~~ 315 (382)
T PLN00144 247 VLVTEK-V-ASAINP--GD-----HGSTFAGGP--LVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGGNPHVKE 315 (382)
T ss_pred EEEcHH-H-HhccCC--CC-----CCCCCCCCH--HHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhhCCCcee
Confidence 887532 2 222110 00 011111222 334445556677655444443333222 23333334444443222
Q ss_pred eeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEecc
Q 014163 367 LSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHL 426 (429)
Q Consensus 367 ~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~ 426 (429)
+.. ...++.+.+. .+...+.+.+. ++|+.+... .....+|++...
T Consensus 316 vrg--~G~~~~l~l~----~~~~~~~~~~~----~~Gv~i~~~-----~~~~~lrl~p~~ 360 (382)
T PLN00144 316 VRG--VGLLVGIQLD----VPAGPLVDACR----DSGLLVLTA-----GKGDVVRLVPPL 360 (382)
T ss_pred eec--CceEEEEEec----CccHHHHHHHH----HCCeEEeec-----CCCCEEEEeCCC
Confidence 211 2334444442 12345666666 999987542 113679998754
No 321
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.24 E-value=1.8e-08 Score=99.59 Aligned_cols=308 Identities=10% Similarity=0.004 Sum_probs=160.7
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceE-eCCchHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVG-TVGSSEAIMLAGLAFKRKWQQKR 145 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~-t~g~t~a~~~al~a~~~~~~~~~ 145 (429)
..+|.+.+++.+.+.+..... ......+.+.++.+.|++++..+.... ....+ +++|+||+..|++.++..
T Consensus 51 h~~p~v~~ai~~ql~~~~~~~-~~~~~~~~~~~lae~l~~~~~~~~~~~--~~~~f~~~sGseA~e~AlklAr~~----- 122 (412)
T TIGR02407 51 HNNPKLKQALIDYLADDGIIH-SLDMATEAKREFLETFNEIILKPRGLD--YKVQFPGPTGTNAVESALKLARKV----- 122 (412)
T ss_pred CCCHHHHHHHHHHHhhcccee-ccccCcHHHHHHHHHHHHhccCccCCC--ceEEEeCCCchHHHHHHHHHHhhh-----
Confidence 456888888887776422111 111223444466667777642221100 11445 589999999999999763
Q ss_pred HhcCCCCCCcEEEEcC-CCchHHHHHHHhcCc------------eeEEEeccCC-c-cccCHHHHHHHhhh------CCe
Q 014163 146 KEQGKPYDKPNIVTGA-NVQVCWEKFARYFEV------------ELKEVKLEEG-Y-YVMNPVKAVELVDE------NTI 204 (429)
Q Consensus 146 ~~~g~~~~~~~vi~~~-~~h~s~~~~~~~~G~------------~v~~v~~~~~-~-~~~d~~~l~~~i~~------~~~ 204 (429)
. +++.|+.-. ..|....-+....|- .+..+|...- . ..-+++.+++.+.+ ++.
T Consensus 123 --t----gr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~a 196 (412)
T TIGR02407 123 --T----GRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPA 196 (412)
T ss_pred --c----CCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceE
Confidence 1 235566544 455443333322221 1233443210 0 01246778888863 345
Q ss_pred EEEEeeCCCccccc----cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccc-cCCCCeeEEEEcCcccC
Q 014163 205 CVAAILGSTLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPLVKSINVSGHKYG 279 (429)
Q Consensus 205 ~v~~~~~~~~tG~~----~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~~~~~d~~~~s~hK~~ 279 (429)
+|++--.....|.+ +-+++|.++|++| |+++++|+++.|+.- ....+... .++ ..|.++++ |++
T Consensus 197 avi~Epi~g~~G~~~~~~~~l~~l~~lc~~~------g~llI~DEV~tG~GR--tG~~~a~~~~~v-~PDi~~~~--K~l 265 (412)
T TIGR02407 197 AVILETVQGEGGINVASDEWLQRLEKLCRRH------DILLIVDDIQAGCGR--TGTFFSFEPAGI-EPDIVCLS--KSI 265 (412)
T ss_pred EEEeccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc--cchhHHhcccCC-CCCEEEec--hhc
Confidence 66655555556663 4489999999999 999999999976421 11000111 122 36766654 887
Q ss_pred CC-CCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHH
Q 014163 280 LV-YAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIR-LGFEGYKNIMENCMGNARALREG 357 (429)
Q Consensus 280 ~~-p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~-l~~~g~~~~~~~~~~~~~~l~~~ 357 (429)
.+ +..+|+++.++. + ..+. .... .. ++.+.+ ....+..++++. +..+ +..++..++.+++.+.
T Consensus 266 g~~G~pigav~~~~~--~-~~~~--~~~~---~~--T~~gnp--l~~aaa~a~l~~~i~~~---~l~~~~~~~g~~l~~~ 330 (412)
T TIGR02407 266 SGYGLPLALTLIKPE--L-DVWK--PGEH---NG--TFRGNN--LAFVTATAALEYYWSDD---AFEKAVQRKSEIIQER 330 (412)
T ss_pred cCCccceeEEEEchh--h-hccC--CCcc---CC--CCCccH--HHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHH
Confidence 76 777899988653 2 2111 1100 01 111222 233344566663 4443 3445555556666666
Q ss_pred HHh----CCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEec
Q 014163 358 LEK----TGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 358 L~~----~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
|++ .+++. ........++.+.+.+. +....+.+++.++|+.+... ..+...+|++..
T Consensus 331 l~~l~~~~~~~~-~~vrg~Gl~~~l~l~~~------~~~~~~~~~~~~~Gv~v~~~----~~~~~~lr~~p~ 391 (412)
T TIGR02407 331 LDRIVAEYPELI-KQVRGRGLMQGIECGDG------DLAGKIAKAAFENGLIIETS----GPNDEVIKLLPP 391 (412)
T ss_pred HHHHHhhCCCce-EeeecceeEEEEEecCh------HHHHHHHHHHHHCCCEEecc----CCCCCEEEEECC
Confidence 553 44222 21121234445665431 23444555555999987542 112345888764
No 322
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.23 E-value=1.4e-08 Score=100.72 Aligned_cols=311 Identities=13% Similarity=-0.024 Sum_probs=161.1
Q ss_pred CChHHHHHHHHHHcCcCCC-CCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYV-DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~ 145 (429)
..+|.+.+++.+.+++... .+...+ .+.+.++.+.|.+++..... ....++++||||+..|++.++..
T Consensus 49 h~~p~v~~a~~~ql~~~~~~~~~~~~--~~~~~~la~~l~~~~p~~~~----~~v~f~~sGseA~e~AlklAr~~----- 117 (420)
T TIGR00700 49 HSHPRVVDAVRTQVAEFTHTCFMVTP--YEGYVALAEKLNRIAPGSGP----KKSVFFNSGAEAVENAVKIARSY----- 117 (420)
T ss_pred CCCHHHHHHHHHHHHhccCccccccC--ChHHHHHHHHHHHhCCCCCC----CEEEEeCCcHHHHHHHHHHHHHh-----
Confidence 3468888888877765322 111111 22233556667776632110 13789999999999999998763
Q ss_pred HhcCCCCCCcEEEE-cCCCchHHHHHHHhcC--------c-----eeEEEeccCC----------ccccCHHHHHHHhh-
Q 014163 146 KEQGKPYDKPNIVT-GANVQVCWEKFARYFE--------V-----ELKEVKLEEG----------YYVMNPVKAVELVD- 200 (429)
Q Consensus 146 ~~~g~~~~~~~vi~-~~~~h~s~~~~~~~~G--------~-----~v~~v~~~~~----------~~~~d~~~l~~~i~- 200 (429)
. +++.|+. ....|....-+....| . ++..+|.... .+.-+++.+++.+.
T Consensus 118 --t----gr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (420)
T TIGR00700 118 --T----GRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVI 191 (420)
T ss_pred --c----CCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHh
Confidence 1 2345654 4445554333322211 1 1233333110 01112567777663
Q ss_pred ----hCCeEEEEeeCCCccccccC----hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc-ccCCCCeeEE
Q 014163 201 ----ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSI 271 (429)
Q Consensus 201 ----~~~~~v~~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~d~~ 271 (429)
++..+|++--....+|.+-+ +++|.++|++| |+++++|++|.++.- ...-... .++. ..|.+
T Consensus 192 ~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~------gillI~DEV~tg~gr--~g~~~a~~~~~~-~pDi~ 262 (420)
T TIGR00700 192 DVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREH------GIVFIADEVQTGFAR--TGAMFACEHEGP-EPDLI 262 (420)
T ss_pred hcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEEecccCCcc--cchhHHHhhcCC-CCCEE
Confidence 23455665555555676644 89999999999 999999999987421 1100000 1111 35655
Q ss_pred EEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Q 014163 272 NVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNA 351 (429)
Q Consensus 272 ~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~ 351 (429)
+ .-|.+.+++.+|+++.+++ .. +.+.. ... ..++.+.+ ....+..++++.+..+.+.+ +..++.
T Consensus 263 ~--lsK~l~~G~pig~v~~~~~-i~-~~~~~--~~~-----~~T~~~~p--l~~aaa~a~l~~l~~~~~~~---~~~~~g 326 (420)
T TIGR00700 263 T--TAKSLADGLPLSGVTGRAE-IM-DAPAP--GGL-----GGTYAGNP--LACAAALAVLAIIESEGLIE---RARQIG 326 (420)
T ss_pred E--eeccccCCcceEEEEecHH-HH-hhcCC--CCc-----CCCCCcCH--HHHHHHHHHHHHHHhccHHH---HHHHHH
Confidence 4 3466667889999887542 21 22110 000 01111221 23333444465555444433 344444
Q ss_pred HHHHHHHHh----CCCeEEeeCCCCceEEEEEecCC-CCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEec
Q 014163 352 RALREGLEK----TGRFEILSKDVGVPLVAFSLKDS-SAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 352 ~~l~~~L~~----~~~~~~~~~~~~~~~v~f~~~~~-~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
+++.+.|++ .|.+..+.. ...++.+.+.+. ......++...+.+++.++|+.+.+. ... ...+|++..
T Consensus 327 ~~l~~~L~~l~~~~~~~~~vrg--~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~---~~f-~~~lRl~p~ 399 (420)
T TIGR00700 327 RLVTDRLTTLKAVDPRIGDVRG--LGAMIAVELVDPGTTEPDAGLAERIATAAHAAGLLLLTC---GMF-GNIIRFLPP 399 (420)
T ss_pred HHHHHHHHHHHhhCCCEEEeec--cceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEecc---CCC-CCEEEEECC
Confidence 444444443 443333322 344555554321 11123456677777777999987542 111 256999863
No 323
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.23 E-value=1e-08 Score=101.68 Aligned_cols=310 Identities=12% Similarity=-0.035 Sum_probs=166.5
Q ss_pred CChHHHHHHHHHHcCcCCCC-CccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVD-MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~ 145 (429)
..+|.+.+++.+.+++-... +..++ .+.+.++.+.+.+++..... ....++++||||+..|++.++.. .
T Consensus 56 h~~p~v~~ai~~ql~~~~~~~~~~~~--~~~~~~la~~l~~~~p~~~~----~~~~f~~sGseA~e~AlklAr~~-t--- 125 (421)
T PRK06777 56 HRHPKVVAAVRQQLDQFTHTAYQIVP--YASYVTLAERINALAPIDGP----AKTAFFTTGAEAVENAVKIARAY-T--- 125 (421)
T ss_pred CCCHHHHHHHHHHHhhcccccccccC--ChHHHHHHHHHHHhCCCCCC----ceEEEeCCcHHHHHHHHHHHHHh-h---
Confidence 45688888888777653211 11111 22233555667776542110 13789999999999999999763 1
Q ss_pred HhcCCCCCCcEEEEcC-CCchHHHHHHHhcCce-------------eEEEeccCCc----cccCHHHHHHHhhh-----C
Q 014163 146 KEQGKPYDKPNIVTGA-NVQVCWEKFARYFEVE-------------LKEVKLEEGY----YVMNPVKAVELVDE-----N 202 (429)
Q Consensus 146 ~~~g~~~~~~~vi~~~-~~h~s~~~~~~~~G~~-------------v~~v~~~~~~----~~~d~~~l~~~i~~-----~ 202 (429)
+++.|+.-. ..|....-+....|.. +..+|..... ..-+++.+++.+.. +
T Consensus 126 -------gr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~ 198 (421)
T PRK06777 126 -------GRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPDQ 198 (421)
T ss_pred -------CCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCCCc
Confidence 235566544 4554433333222210 1222221110 11246678887752 3
Q ss_pred CeEEEEeeCCCccccc-cC---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCc-cccCCCCeeEEEEcCcc
Q 014163 203 TICVAAILGSTLTGEF-ED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDFRLPLVKSINVSGHK 277 (429)
Q Consensus 203 ~~~v~~~~~~~~tG~~-~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~~~~~d~~~~s~hK 277 (429)
..+|++.-.....|.. -| +++|.++|++| |+++++|++|.++.- ....+. ..+++ ..|.++ .-|
T Consensus 199 iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~------g~llI~DEv~tg~gr--~g~~~~~~~~~~-~pDiv~--~sK 267 (421)
T PRK06777 199 VAAILLEPIQGEGGFNVAPPEFMSALRTLCDEH------GILLIADEVQTGFAR--TGKLFAMEYYDV-KPDLIT--MAK 267 (421)
T ss_pred eEEEEECCccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCcc--CCchhhhhhcCC-CCCEEe--eeh
Confidence 4555555444455642 33 89999999999 999999999986421 111001 01121 256554 346
Q ss_pred cCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Q 014163 278 YGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREG 357 (429)
Q Consensus 278 ~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~ 357 (429)
.+.+++.+|+++.+++ +.+.+... .. ..++.+.+ ....+..++|+.+.. ++..++..++.+++.+.
T Consensus 268 ~l~~G~pigav~~~~~--i~~~~~~~--~~-----~~T~~~~p--~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~ 333 (421)
T PRK06777 268 SLGGGMPISAVVGRAE--VMDAPAPG--GL-----GGTYAGNP--LAVAAALAVLDVIAE---EKLCQRALILGAHLVEV 333 (421)
T ss_pred hhcCCCceEEEEEcHH--HHhccCCC--CC-----CCCCCcCH--HHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHH
Confidence 6557788999887532 22221110 00 11111211 334444455554433 45677778888888888
Q ss_pred HHhC----CCeEEeeCCCCceEEEEEecCC-CCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEe
Q 014163 358 LEKT----GRFEILSKDVGVPLVAFSLKDS-SAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVIS 424 (429)
Q Consensus 358 L~~~----~~~~~~~~~~~~~~v~f~~~~~-~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~ 424 (429)
|+++ +.+.-+ .+ ...++.+.+..+ ......++...+.+++.++|+.+... ...+ .++|++.
T Consensus 334 L~~l~~~~~~i~~v-rg-~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~---~~~g-~~lr~~p 399 (421)
T PRK06777 334 LEKAKASCPAIVDI-RA-RGSMVAVEFNDPQTGKPSPEFTRQYQRQALEEGLLLLSC---GVHG-NVIRFLY 399 (421)
T ss_pred HHHHHHhCCCeEEe-cC-ceEEEEEEEecCccCCccHHHHHHHHHHHHhCCeEEeec---CCCC-CEEEEeC
Confidence 8764 322222 12 344555544321 12233456777777777999887542 1112 4689876
No 324
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.22 E-value=2e-08 Score=99.57 Aligned_cols=314 Identities=11% Similarity=-0.010 Sum_probs=165.6
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
..+|.+.+++.+.++..... .......+.+.++.+.+.+++..... ....++++||||+..|++.++..
T Consensus 56 h~~p~v~~ai~~ql~~~~~~-~~~~~~~~~~~~la~~l~~~~p~~~~----~~~~f~~sGseA~e~AlklAr~~------ 124 (421)
T PRK09792 56 HRHPDLVAAVEQQLQQFTHT-AYQIVPYESYVTLAEKINALAPVSGQ----AKTAFFTTGAEAVENAVKIARAH------ 124 (421)
T ss_pred CCCHHHHHHHHHHHHhccCc-ccCccCCHHHHHHHHHHHHhCCCCCC----ceEEEeCChHHHHHHHHHHHHHh------
Confidence 34688888888777653211 11111233344566667776542210 13789999999999999999753
Q ss_pred hcCCCCCCcEEEEcCC-CchHHHHHHHhcCc-------------eeEEEeccCCcccc----CHHHHHHHhhh-----CC
Q 014163 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFEV-------------ELKEVKLEEGYYVM----NPVKAVELVDE-----NT 203 (429)
Q Consensus 147 ~~g~~~~~~~vi~~~~-~h~s~~~~~~~~G~-------------~v~~v~~~~~~~~~----d~~~l~~~i~~-----~~ 203 (429)
. +++.|+.-.. .|....-+....|. .+..+|...+...+ +++.+++.++. +.
T Consensus 125 -t----gr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~i 199 (421)
T PRK09792 125 -T----GRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQV 199 (421)
T ss_pred -c----CCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhccCCCce
Confidence 1 2356665444 55432222222221 13344442111112 34788888762 35
Q ss_pred eEEEEeeCCCcccccc-C---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc-ccCCCCeeEEEEcCccc
Q 014163 204 ICVAAILGSTLTGEFE-D---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHKY 278 (429)
Q Consensus 204 ~~v~~~~~~~~tG~~~-~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~d~~~~s~hK~ 278 (429)
.+|++.-..+++|..- | +++|.++|++| |+++++|+++.++.- ....+.. .++ ...|.+++ -|.
T Consensus 200 aavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~------g~llI~DEv~tg~gr--~G~~~a~~~~~-~~pDi~t~--gK~ 268 (421)
T PRK09792 200 AAIIFEPVQGEGGFNVAPKELVAAIRRLCDEH------GIVMIADEVQSGFAR--TGKLFAMDHYA-DKPDLMTM--AKS 268 (421)
T ss_pred EEEEEccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeccccCCCC--CCchhHHHhcC-CCCcEEEe--ehh
Confidence 6677766667778653 5 89999999999 999999999987421 1111111 111 13564433 577
Q ss_pred CCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH
Q 014163 279 GLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGL 358 (429)
Q Consensus 279 ~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L 358 (429)
+.++..+|+++.+++ .. +.+.. ... ..++.+.+ ....+..++++.+..+ +..++.+++.+++.+.|
T Consensus 269 l~~G~pigav~~~~~-i~-~~~~~--~~~-----~~T~~gnp--l~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~l 334 (421)
T PRK09792 269 LAGGMPLSGVVGNAN-IM-DAPAP--GGL-----GGTYAGNP--LAVAAAHAVLNIIDKE---SLCERANQLGQRLKNTL 334 (421)
T ss_pred hcCCCceEEEEEcHH-HH-hccCC--CCc-----CCCCCCCH--HHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHH
Confidence 777788999887542 21 21110 000 11111222 2333444566666443 45555666666666666
Q ss_pred HhCC-CeEEeeCCCC-ceEEEEEecCCCC-CCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEec
Q 014163 359 EKTG-RFEILSKDVG-VPLVAFSLKDSSA-HTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 359 ~~~~-~~~~~~~~~~-~~~v~f~~~~~~~-~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
+++- .+..+..... ..++.+.+.+... .......+.+.+++.++|+.+... -.....+|+...
T Consensus 335 ~~l~~~~p~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~----g~~~~~irl~P~ 400 (421)
T PRK09792 335 IDAKESVPAIAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTC----GAYGNVIRFLYP 400 (421)
T ss_pred HHHHHhCCCcceecccceEEEEEecCCccCCcchHHHHHHHHHHHHCCcEEeec----CCCCCEEEEeCC
Confidence 5431 0111222212 3455566643210 111134555666666999987421 112356888743
No 325
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.21 E-value=2.1e-08 Score=99.33 Aligned_cols=305 Identities=11% Similarity=0.028 Sum_probs=161.8
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
..+|.+.+++.+.+++-...... ...+...++.+.|++++..+. ....++++||||+..|++.++....+
T Consensus 91 h~hp~v~~Av~~ql~~l~~~~~~--~~~~~~~~lAe~L~~~~p~~~-----~~v~f~~SGsEA~e~AlklAr~~t~~--- 160 (442)
T TIGR03372 91 HRNPNVIAAVENQLAKQPLHSQE--LLDPLRALLAKTLAALTPGKL-----KYSFFCNSGTESVEAALKLAKAYQSP--- 160 (442)
T ss_pred CCCHHHHHHHHHHHHhCCCcccc--cCCHHHHHHHHHHHHhCCCCc-----CEEEEeCCchHHHHHHHHHHHHHHhh---
Confidence 45688888887776543221111 113334456677777764321 13789999999999999998764211
Q ss_pred hcCCCCCCcEEEEcCC-CchHHHHHHHhcCc------------eeEEEeccCCccccCHHHHHHHhhh------CCeEEE
Q 014163 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFEV------------ELKEVKLEEGYYVMNPVKAVELVDE------NTICVA 207 (429)
Q Consensus 147 ~~g~~~~~~~vi~~~~-~h~s~~~~~~~~G~------------~v~~v~~~~~~~~~d~~~l~~~i~~------~~~~v~ 207 (429)
. ++..|+.... .|....-+....|- .+..+|. -|.+.+++.++. +..+|+
T Consensus 161 -~----gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~------~d~~~~~~~l~~~~~~~~~vAavI 229 (442)
T TIGR03372 161 -R----GKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAF------GDIEAMLKALNECKKTGDDVAAII 229 (442)
T ss_pred -c----CCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCC------CCHHHHHHHHHHHhcCCCcEEEEE
Confidence 1 2345666554 45443333322221 1222221 256777777642 345555
Q ss_pred EeeCCCccccccC----hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc-ccCCCCeeEEEEcCcccCCCC
Q 014163 208 AILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHKYGLVY 282 (429)
Q Consensus 208 ~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~d~~~~s~hK~~~~p 282 (429)
+--....-|.+.| ++++.++|++| |+.+++|+++.|+.- ...-+.. .+++ ..|.++ .-|.+.++
T Consensus 230 vEpv~g~gG~~~p~~~yl~~l~~lc~~~------g~llI~DEV~tG~GR--tG~~~a~e~~gv-~PDivt--~gK~lg~G 298 (442)
T TIGR03372 230 LEPIQGEGGVILPPEGYLPAVRALCDEF------GALLILDEVQTGMGR--TGKMFACEHEGV-QPDILC--LAKALGGG 298 (442)
T ss_pred EeCccCCCCcccCCHHHHHHHHHHHHHc------CCEEEEeecccCCCc--cccchhhhhcCC-CCCeee--ehhhhcCC
Confidence 5544455577777 99999999999 999999999966321 1111111 1122 367665 34655554
Q ss_pred -CCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhC
Q 014163 283 -AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKT 361 (429)
Q Consensus 283 -~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~ 361 (429)
..+|.++.++ +.. +.+. ...+..+ . ++.|.+ ....+..++|+.+.+++ ..++..++.++|++.|+++
T Consensus 299 ~~Pigavv~~~-~i~-~~~~-~~~~~~~--~--T~~gnp--~~~Aaa~a~L~~i~~~~---l~~~~~~~G~~l~~~L~~l 366 (442)
T TIGR03372 299 VMPIGATIATE-AVF-SVLF-DNPFLHT--T--TFGGNP--LACAAALATINELLEKN---LPAQAAIKGDFLLDGFQQL 366 (442)
T ss_pred cccceEEEecH-HHH-Hhhh-ccCcccc--C--CCCCCH--HHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHH
Confidence 3567666653 222 2221 1111111 1 111222 34445556666665443 4556667777777777654
Q ss_pred CC-eE-EeeC-CCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEec
Q 014163 362 GR-FE-ILSK-DVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 362 ~~-~~-~~~~-~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
.. +. .+.+ .....++.+.+..+ +....+.+.+.++|+.+.... .+...+|++..
T Consensus 367 ~~~~~~~i~~vRG~Gl~~giel~~~------~~~~~i~~~l~~~Gvl~~~~~----~~~~~lr~~Pp 423 (442)
T TIGR03372 367 AAEYPDLIIEARGKGLLMAIEFRDN------EIGYAFAKELFQQNILVAGTL----NNAKSIRIEPP 423 (442)
T ss_pred HHhCCCceEEEecceEEEEEEeCCh------HHHHHHHHHHHHCCcEEeecC----CCCCEEEEECC
Confidence 21 11 1111 11344566666431 233344444449998875321 12346887654
No 326
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.21 E-value=2.3e-10 Score=107.67 Aligned_cols=283 Identities=15% Similarity=0.061 Sum_probs=167.6
Q ss_pred hhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHH
Q 014163 92 VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA 171 (429)
Q Consensus 92 ~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~ 171 (429)
+..++..++.+.+|+++|.+. ..+|..| -..|.+.+-++.. ++..|+-.+..|.|+..-|
T Consensus 179 G~~~~hkelE~l~A~f~g~e~------a~vF~mG-f~TNs~~~p~l~~-------------~gsLIiSDelNHaSi~~Ga 238 (519)
T KOG1357|consen 179 GTTEEHKELEELVARFLGVED------AIVFSMG-FATNSMNIPSLLG-------------KGSLIISDELNHASLITGA 238 (519)
T ss_pred ccHHHHHHHHHHHHHhcCCcc------eEEEecc-ccccccCcceeec-------------CCcceeeccccchheeccc
Confidence 666677777788999999985 2445443 2223333333332 1245666677899999999
Q ss_pred HhcCceeEEEeccCCccccCHHHHHHHhhh-------CC-----eEEEEeeC-CCccccccChHHHHHHHHHhhhccCCC
Q 014163 172 RYFEVELKEVKLEEGYYVMNPVKAVELVDE-------NT-----ICVAAILG-STLTGEFEDVKLLHDLLTKKNEETGWD 238 (429)
Q Consensus 172 ~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~-------~~-----~~v~~~~~-~~~tG~~~~l~~I~~la~~~~~~~~~~ 238 (429)
++.|+.++...-+ |+.+||+.|.+ +| +.+++.-+ ...-|.+.++.++.+++|+| .
T Consensus 239 RLSgAtiRVfkHN------dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkky------k 306 (519)
T KOG1357|consen 239 RLSGATTRVFRHN------DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKY------K 306 (519)
T ss_pred cccCceEEEEecC------CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccc------c
Confidence 9999999888743 34556666554 22 33333333 33568999999999999999 9
Q ss_pred ccEEeecccccccccccCCCCcc--ccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCcee
Q 014163 239 TPIHVDAASGGFIAPFLYPDLEW--DFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTL 316 (429)
Q Consensus 239 ~~l~vD~a~~~~~~~~~~~~~~~--~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (429)
++++.|+||+.++.+-..-.... -..-..+|.+.....|.+.+. .|++..+ + .+.+.+.....+...
T Consensus 307 ayl~lDEAHSiGA~g~tGrgvce~~g~d~~dvDImMGtftKSfga~--GGyiags-k-~lid~lrt~s~~~~y------- 375 (519)
T KOG1357|consen 307 AYLYLDEAHSIGAMGATGRGVCEYFGVDPEDVDIMMGTFTKSFGAA--GGYIAGS-K-ELIDYLRTPSPSALY------- 375 (519)
T ss_pred EEEEeeccccccccCCCCcceeeccCCCchhheeecceehhhcccc--cceecCc-H-HHHhhhccCCCceee-------
Confidence 99999999976654211100000 112235899999999977542 2444332 2 332322222221111
Q ss_pred ccCCchhHHHHHH-HHHHHc----CHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHH
Q 014163 317 NFSKGSSQIIAQY-YQFIRL----GFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEI 391 (429)
Q Consensus 317 ~~tr~~~~~~~~~-~al~~l----~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~ 391 (429)
++.....++.+- .+++.+ +.+.-++.+++..+++.+++..|+..+ |.+++.. +.+++.+.+-++ -....+
T Consensus 376 -at~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~g-fivyG~~-dSpVvplll~~~--~k~~~f 450 (519)
T KOG1357|consen 376 -ATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIERLAENSRYFRWELQKMG-FIVYGNN-DSPVVPLLLYGP--AKIVAF 450 (519)
T ss_pred -cccCChHHHHHHHHHHHhhcCCCcccHHHHHHHHHHhhhHHHHHhhhcCc-EEEecCC-CCCcceeeecCc--ccccHH
Confidence 122112232222 233333 345568888999999999999999987 8888775 566655544332 234466
Q ss_pred HHHHHHHHhccCceeccc-CCCCCCCceEEEEEecc
Q 014163 392 SEGLRKKLNRFQVVYPQK-LPMSYPWSTKLRVISHL 426 (429)
Q Consensus 392 ~~~L~~~l~~~G~~~~~~-~~~~~~~~~~lRi~~~~ 426 (429)
.++|. ++++.+... +|...--..-.|+|++.
T Consensus 451 ~r~~l----~~nigvVvvgfPatpl~e~r~R~c~Sa 482 (519)
T KOG1357|consen 451 SREML----ERNIGVVVVGFPATPLLESRARFCLSA 482 (519)
T ss_pred HHHHH----hcCceEEEEeCCCchHHHhHHHhhhcc
Confidence 77777 776655433 44432122224666543
No 327
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.21 E-value=2.2e-08 Score=99.43 Aligned_cols=322 Identities=12% Similarity=0.028 Sum_probs=163.8
Q ss_pred CCCCCcccccccc----CCChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceE-eCCch
Q 014163 53 DGNPRLNLASFVT----TWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVG-TVGSS 127 (429)
Q Consensus 53 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~-t~g~t 127 (429)
+|+.++.+.++.. ...+|.+.+++.+.+.+...... .....+.+.++.+.+++++..+.... ....+ +++||
T Consensus 37 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~~~~~~~-~~~~~~~~~~lae~l~~~~~~~~~~~--~~~~f~~~sGs 113 (425)
T PRK09264 37 DGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQRDGITHG-LDMHTTAKREFLETFEETILKPRGLD--YKVQFTGPTGT 113 (425)
T ss_pred CCCEeeecccchhhccCCCCCHHHHHHHHHHHHhcccccc-cccCcHHHHHHHHHHHHhhcCCcCCC--ceEEEeCCCHH
Confidence 4555544434322 24568888888877764221111 11122344456666777653321110 11446 47999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCC-CchHHHHHHHhcC---------c---eeEEEeccCC-cc-ccCH
Q 014163 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGAN-VQVCWEKFARYFE---------V---ELKEVKLEEG-YY-VMNP 192 (429)
Q Consensus 128 ~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~-~h~s~~~~~~~~G---------~---~v~~v~~~~~-~~-~~d~ 192 (429)
||+..|++.++.. . ++..|+.-.. .|....-+....| . .+..+|.... .. .-|+
T Consensus 114 eA~e~AlklAr~~-------t----gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 182 (425)
T PRK09264 114 NAVEAALKLARKV-------T----GRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTL 182 (425)
T ss_pred HHHHHHHHHHHHh-------c----CCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHH
Confidence 9999999999763 1 2345665444 4543222222211 1 2344554310 00 1267
Q ss_pred HHHHHHhhh------CCeEEEEeeCCCccccc----cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccc
Q 014163 193 VKAVELVDE------NTICVAAILGSTLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD 262 (429)
Q Consensus 193 ~~l~~~i~~------~~~~v~~~~~~~~tG~~----~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~ 262 (429)
+++++.+.+ +..+|++--.....|.+ +.+++|.++|++| |+++++|++|.++.- ....+...
T Consensus 183 ~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~------g~llI~DEV~tG~Gr--tG~~~~~~ 254 (425)
T PRK09264 183 AYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKH------DILLIVDDIQAGCGR--TGTFFSFE 254 (425)
T ss_pred HHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHc------CcEEEEechhhCCcc--ccHHHHHh
Confidence 888888863 23455554444444543 4699999999999 999999999976421 11000001
Q ss_pred -cCCCCeeEEEEcCcccCCC-CCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHH-HHcCHHH
Q 014163 263 -FRLPLVKSINVSGHKYGLV-YAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF-IRLGFEG 339 (429)
Q Consensus 263 -~~~~~~d~~~~s~hK~~~~-p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al-~~l~~~g 339 (429)
+++ ..|.++++ |.+.+ +..+|+++++++ + ..+ ..... .. ++.+.+ ....+..+++ ..+..
T Consensus 255 ~~~v-~PDi~t~~--K~l~~~G~pigav~~~~~--i-~~~--~~~~~---~~--T~~gnp--~~~aaa~a~l~~~~~~-- 317 (425)
T PRK09264 255 RAGI-TPDIVTLS--KSISGYGLPMALVLIKPE--L-DVW--KPGEH---NG--TFRGNN--LAFVTATAALEEYWSD-- 317 (425)
T ss_pred hcCC-CCCEEEec--cccCCCccceEEEEEchh--h-hcc--CCCcc---CC--CCCCCH--HHHHHHHHHHHHHHhh--
Confidence 122 35776664 76655 566788888643 2 111 11110 01 111221 2334444555 33322
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC----CCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCC
Q 014163 340 YKNIMENCMGNARALREGLEKT----GRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYP 415 (429)
Q Consensus 340 ~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~ 415 (429)
.+..++..++.++|.+.|+++ |.+ +........++.+.+.+ .+....+.+.+.++|+.+... . .
T Consensus 318 -~~l~~~~~~~g~~l~~~l~~l~~~~~~~-~~~vrg~Gl~~~i~l~~------~~~~~~l~~~~~~~Gv~~~~~---~-~ 385 (425)
T PRK09264 318 -DAFEKEVKAKGELVRERLEEIAAKYPGL-GAEVRGRGMMQGIDFGD------GELAGKIAAEAFENGLIIETS---G-P 385 (425)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHhCCCc-eecceecccEEEEEecC------hHHHHHHHHHHHHCCCEEecc---C-C
Confidence 245566667777777766653 322 11111123344565532 133344444555999987542 1 1
Q ss_pred CceEEEEEec
Q 014163 416 WSTKLRVISH 425 (429)
Q Consensus 416 ~~~~lRi~~~ 425 (429)
+...||++..
T Consensus 386 ~~~~lr~~p~ 395 (425)
T PRK09264 386 EDEVVKLLPP 395 (425)
T ss_pred CCCEEEEeCC
Confidence 1245787743
No 328
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.21 E-value=1.3e-08 Score=98.50 Aligned_cols=285 Identities=13% Similarity=-0.008 Sum_probs=153.5
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
..+|.+.+++.+.+++-......+. .+...++.+.++++.|.+. ..++++||+|+..|++.++..
T Consensus 40 h~~p~v~~ai~~ql~~~~~~~~~~~--~~~~~~la~~l~~~~~~~~-------v~~~~SGseA~e~Alklar~~------ 104 (364)
T PRK04013 40 HNHPEWVEEMSEQLEKLVVAGPMFE--HEEKEEMLEELSKWVNYEY-------VYMGNSGTEAVEAALKFARLY------ 104 (364)
T ss_pred CCCHHHHHHHHHHHHhcCCccCCcC--CHHHHHHHHHHHhhcCCCE-------EEEeCchHHHHHHHHHHHHHH------
Confidence 3457777877777664221111111 2223345556777776543 889999999999999998763
Q ss_pred hcCCCCCCcEEEEcCCCch-HHHHHHHhc-------CceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccc
Q 014163 147 EQGKPYDKPNIVTGANVQV-CWEKFARYF-------EVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEF 218 (429)
Q Consensus 147 ~~g~~~~~~~vi~~~~~h~-s~~~~~~~~-------G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~ 218 (429)
. ++++|+..+.+|+ ...-+.... +..+...++..-.+ -|++.+++.+.+++.+|++.......|.+
T Consensus 105 -~----gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~-~d~~~l~~~i~~~~aAvivEpi~g~gG~~ 178 (364)
T PRK04013 105 -T----GRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPF-NDVEAAKEAITKETAAVIFEPIQGEGGIV 178 (364)
T ss_pred -h----CCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecC-CCHHHHHHHhcCCcEEEEEcCCcCCCCCc
Confidence 1 2356776665444 322222211 11111111111011 26889999998888888777665555554
Q ss_pred -cC---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc-ccCCCCeeEEEEcCcccCCCCCCeEEEEEeCC
Q 014163 219 -ED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHKYGLVYAGVGWVVWRTK 293 (429)
Q Consensus 219 -~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~ 293 (429)
.| +++|.++|++| |++++.|+++.|+ - ...-+.. .+++ ..|.+++ -|.+.++..+|.++.+..
T Consensus 179 ~~~~~yl~~lr~lc~~~------gillI~DEv~tG~-R--tG~~~a~~~~gv-~PDiv~~--gK~lggG~P~~a~~~~~~ 246 (364)
T PRK04013 179 PAKEEFVKTLRDLTEDV------GALLIADEVQSGL-R--TGKFLAIEHYKV-EPDIVTM--GKGIGNGVPVSLTLTNFD 246 (364)
T ss_pred CCCHHHHHHHHHHHHHc------CCEEEEechhhcC-C--CCchhHHHhcCC-CCCEEEe--cccccCCceeEEEEeccc
Confidence 34 99999999999 9999999999864 1 1111111 1122 3676665 365555566777666532
Q ss_pred CCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCC-CC
Q 014163 294 DDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKD-VG 372 (429)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~ 372 (429)
. .. .... .|+.|.+ ....+..++++.+.++++.+..++. + +.+.. + .+.+. ..
T Consensus 247 -~-~~------~~~~-----~T~~gnp--~~~aaa~a~l~~i~~~~l~~~~~~~------l-~~l~~-~---~v~~vRG~ 300 (364)
T PRK04013 247 -V-ER------GKHG-----STFGGNP--LACKAVAVTLRILRRERLVEKAGEK------F-IEIKG-E---RVVTTRGR 300 (364)
T ss_pred -c-cC------CCcC-----CCCCcCH--HHHHHHHHHHHHHHhccHHHHHHHH------H-HHhcc-C---cceeeeeC
Confidence 1 10 0000 1111222 3445566667766665544443321 2 22322 3 12221 12
Q ss_pred ceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEe
Q 014163 373 VPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVIS 424 (429)
Q Consensus 373 ~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~ 424 (429)
.-++.+.+..+ ...+.+.+. ++|+.+... +...+|+.-
T Consensus 301 Gl~~gve~~~~----~~~i~~~~~----~~Gll~~~~------g~~vlr~~P 338 (364)
T PRK04013 301 GLMIGIVLKKP----VGKYVEELQ----NRGYLVHTA------GQRVIRLLP 338 (364)
T ss_pred cEEEEEEeCCc----HHHHHHHHH----hCCcEEeeC------CCCEEEEeC
Confidence 34556665421 234555555 899887531 235588764
No 329
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.20 E-value=1.1e-08 Score=101.96 Aligned_cols=311 Identities=12% Similarity=0.016 Sum_probs=165.8
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
..+|.+.+++.+.+..-..... ....+.+.++.+.|++++.... ....++++||||+..|++.++.....
T Consensus 98 H~~p~v~~Ai~~ql~~l~~~~~--~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGsEAve~AlklAr~~t~~--- 167 (459)
T PRK11522 98 HRNPVVVSAVQNQLAKQPLHSQ--ELLDPLRAMLAKTLAALTPGKL-----KYSFFCNSGTESVEAALKLAKAYQSP--- 167 (459)
T ss_pred CCCHHHHHHHHHHHhhCccccc--ccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCCchHHHHHHHHHHHHHhcc---
Confidence 3468888888877764322111 1123334456666777653221 13789999999999999998764210
Q ss_pred hcCCCCCCcEEEEcCC-CchHHHHHHHhcCceeE---EEeccCCcc---ccCHHHHHHHhhh------CCeEEEEeeCCC
Q 014163 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFEVELK---EVKLEEGYY---VMNPVKAVELVDE------NTICVAAILGST 213 (429)
Q Consensus 147 ~~g~~~~~~~vi~~~~-~h~s~~~~~~~~G~~v~---~v~~~~~~~---~~d~~~l~~~i~~------~~~~v~~~~~~~ 213 (429)
. ++..|+.... .|....-+....|-... +.|..++-- .-|.+++++.++. +..+|++-....
T Consensus 168 -~----gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIvEpv~g 242 (459)
T PRK11522 168 -R----GKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILEPIQG 242 (459)
T ss_pred -C----CCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEEecccC
Confidence 0 1235665554 45433333332221110 011111000 1267888888762 234566655555
Q ss_pred ccccccC----hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc-ccCCCCeeEEEEcCcccCCCC-CCeEE
Q 014163 214 LTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHKYGLVY-AGVGW 287 (429)
Q Consensus 214 ~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~d~~~~s~hK~~~~p-~g~g~ 287 (429)
..|.+.| ++++.++|++| |+.+++|+++.|+.- ...-+.. .+++ ..|.+++ -|.++++ ..+|.
T Consensus 243 ~~G~~~pp~~yl~~lr~lc~~~------g~llI~DEV~tG~GR--tG~~~a~e~~gv-~PDivt~--gK~lggG~~Piga 311 (459)
T PRK11522 243 EGGVILPPEGYLTAVRKLCDEF------GALLILDEVQTGMGR--TGKMFACEHENV-QPDILCL--AKALGGGVMPIGA 311 (459)
T ss_pred CCCCccCCHHHHHHHHHHHHHc------CCEEEeccceecCCc--cchhhhhhccCC-CCCEEEe--chhhhCCCcccee
Confidence 6677776 99999999999 999999999965321 1111011 1122 2576643 4666554 35677
Q ss_pred EEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCC-CeE-
Q 014163 288 VVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTG-RFE- 365 (429)
Q Consensus 288 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~-~~~- 365 (429)
++.+++ .. +.+... .+... .++.|.+ ....+..++|+.+.++ +..++..++.++|.+.|+++. .+.
T Consensus 312 v~~~~~-i~-~~~~~~-~~~~~----~T~~gnp--~~~Aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~ 379 (459)
T PRK11522 312 TIATEE-VF-SVLFDN-PFLHT----TTFGGNP--LACAAALATINVLLEQ---NLPAQAEQKGDYLLDGFRQLAREYPD 379 (459)
T ss_pred EEEcHH-HH-HHhccC-CcccC----CCCCCCH--HHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 776542 22 211111 11100 1111222 3445566667766544 356778888888888887652 121
Q ss_pred EeeC-CCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEec
Q 014163 366 ILSK-DVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 366 ~~~~-~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
++.. .....++.+.+.+. +....+.++|.++|+.+... ..+...+|++..
T Consensus 380 ~i~~VrG~Gl~~giel~~~------~~~~~i~~~l~~~Gvl~~~~----~~~~~~lr~~Pp 430 (459)
T PRK11522 380 LVQEARGKGMLMAIEFVDN------EIGYNFASEMFRQRVLVAGT----LNNAKTIRIEPP 430 (459)
T ss_pred ceeeEEeceeEEEEEecCc------hHHHHHHHHHHHCCeEEEec----CCCCCEEEEECC
Confidence 2221 11344566666432 23334444444999887532 123456888764
No 330
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.20 E-value=2.1e-09 Score=99.94 Aligned_cols=323 Identities=12% Similarity=0.068 Sum_probs=185.7
Q ss_pred HHhhccCCCCC-ccccccccCC---Ch---HHHHHHHHHHcCcCC-CCCccChhhHHHHHHHHHHHHHhhCCCCCC--CC
Q 014163 47 NDELMLDGNPR-LNLASFVTTW---ME---PECDKLVMASINKNY-VDMDEYPVTTELQNRCVNMIAHLFNTPVAD--DK 116 (429)
Q Consensus 47 ~~~~~~~~~~~-~~~~~~~~~~---~~---~~~~~~~~~~~~~~~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~--~~ 116 (429)
.+.+..+..|. .|++.+.... -+ +.+.++-....++.. ..|..-.+...+.+++.+. +||.+... ..
T Consensus 17 ~e~f~~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~l---lFG~d~~~l~~~ 93 (396)
T COG1448 17 KEAFKADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQKL---LFGADSPALAED 93 (396)
T ss_pred HHHHhcCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHHH---hcCCCcHHHHhh
Confidence 44455555555 6676665432 12 345555444444332 2344445666666554332 46755321 11
Q ss_pred CCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEec-cCCccccCHHHH
Q 014163 117 TAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL-EEGYYVMNPVKA 195 (429)
Q Consensus 117 ~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~-~~~~~~~d~~~l 195 (429)
-...+-|.|||.|+.++..-+.+.. .+..|.+|++++..........|+++..-|. |..+..+|.+.+
T Consensus 94 Rv~t~Qt~GGTGAL~~~A~fl~~~~-----------~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~df~~m 162 (396)
T COG1448 94 RVATVQTLGGTGALRVAADFLARFF-----------PDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGLDFDGM 162 (396)
T ss_pred hHhheecCCcchHHHHHHHHHHHhC-----------CCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccccHHHH
Confidence 2346788899999988776665421 1236999999999999999999999999886 444456999999
Q ss_pred HHHhhhC---CeEEEEeeCCCccccc---cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcccc--CCCC
Q 014163 196 VELVDEN---TICVAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF--RLPL 267 (429)
Q Consensus 196 ~~~i~~~---~~~v~~~~~~~~tG~~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~--~~~~ 267 (429)
.+.|+.- ..++.-.+.+||||.- +.+++|.++.++. +..-++|-||-||...+..+...... ....
T Consensus 163 la~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r------~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~ 236 (396)
T COG1448 163 LADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKER------GLIPFFDIAYQGFADGLEEDAYALRLFAEVGP 236 (396)
T ss_pred HHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHc------CCeeeeehhhhhhccchHHHHHHHHHHHHhCC
Confidence 8888753 3444446678999975 6788999999999 99999999997765432211111111 1111
Q ss_pred eeEEEEcCcccC-CCCCCeEEEEEe--CCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHH------HHHcCHH
Q 014163 268 VKSINVSGHKYG-LVYAGVGWVVWR--TKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQ------FIRLGFE 338 (429)
Q Consensus 268 ~d~~~~s~hK~~-~~p~g~g~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~a------l~~l~~~ 338 (429)
--.++.|.-|.+ .=+-++|.+.+- +.+...+....-..-.... | .+++. ...+..+. |+..=..
T Consensus 237 ~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~---y---SnPP~-~Ga~vva~IL~~p~Lra~W~~ 309 (396)
T COG1448 237 ELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTN---Y---SNPPA-HGAAVVATILNNPELRAEWEQ 309 (396)
T ss_pred cEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhc---c---CCCch-hhHHHHHHHhCCHHHHHHHHH
Confidence 245566666743 223445554432 2221111111101111111 1 11111 11111111 1211124
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCC---CeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceec
Q 014163 339 GYKNIMENCMGNARALREGLEKTG---RFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYP 407 (429)
Q Consensus 339 g~~~~~~~~~~~~~~l~~~L~~~~---~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~ 407 (429)
.+..+.++..++++.|.+.|++.+ .|..+.. +.+.+++. +.+.+.+.+-.. +.||...
T Consensus 310 El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i~~--Q~GMFsy~-----Gls~~QV~rLre----e~~IY~v 370 (396)
T COG1448 310 ELEEMRQRILEMRQALVDALKALGAPRNFDFIIS--QRGMFSYT-----GLSPEQVDRLRE----EFGIYLV 370 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCcccchHhh--cCceeecC-----CCCHHHHHHHHH----hccEEEe
Confidence 467888999999999999999843 2555533 56676665 455556554444 7787754
No 331
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.19 E-value=4.2e-08 Score=95.53 Aligned_cols=322 Identities=14% Similarity=0.045 Sum_probs=179.0
Q ss_pred CCCCCcccccccc----CCChHHHHHHHHHHcCcCC-C--CCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCC
Q 014163 53 DGNPRLNLASFVT----TWMEPECDKLVMASINKNY-V--DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVG 125 (429)
Q Consensus 53 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g 125 (429)
+|+.++.|.++.. ...+|.+.+++.+.+..-. . .+..+ +...++.+.|.+++.-+ .. ....++++
T Consensus 54 dG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~~~~~~~~----e~~v~~ae~L~~~~p~~--~~--~~~~f~~s 125 (447)
T COG0160 54 DGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHTHTRDLYY----EPYVELAEKLTALAPGS--GL--KKVFFGNS 125 (447)
T ss_pred CCCEEEEcccCcchhccCCCCHHHHHHHHHHHHHhhcccCCcccc----hhHHHHHHHHHHhCCcc--cC--CeEEecCC
Confidence 4555555555322 2456888888776554421 1 12222 22334445566655432 11 23889999
Q ss_pred chHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEE-EcCCCchHHHHHHHhcCc-------------eeEEEeccCC---cc
Q 014163 126 SSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIV-TGANVQVCWEKFARYFEV-------------ELKEVKLEEG---YY 188 (429)
Q Consensus 126 ~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~-------------~v~~v~~~~~---~~ 188 (429)
|+|||-.|++.++... +++.|| +....|.....++.+.|- .+..+|.... .+
T Consensus 126 GaeA~E~AiKiAr~~T-----------gr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~ 194 (447)
T COG0160 126 GAEAVEAAIKIARAYT-----------GRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPF 194 (447)
T ss_pred cHHHHHHHHHHHHHHh-----------CCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcc
Confidence 9999999999998742 234455 455566554444444332 2566665321 01
Q ss_pred --------ccCHHHHHHHhhh------CCeEEEEeeCCCccccccC----hHHHHHHHHHhhhccCCCccEEeecccccc
Q 014163 189 --------VMNPVKAVELVDE------NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGF 250 (429)
Q Consensus 189 --------~~d~~~l~~~i~~------~~~~v~~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~ 250 (429)
.-..+.++..+.. ++.++++--....-|.+.| ++++.++|++| |+++|+|++|.|+
T Consensus 195 ~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~------gillI~DEVQtG~ 268 (447)
T COG0160 195 GIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREH------GILLIADEVQTGF 268 (447)
T ss_pred cCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCC
Confidence 1123445554443 2456666666666777633 78999999999 9999999999875
Q ss_pred cccccCCCCcc-ccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHH
Q 014163 251 IAPFLYPDLEW-DFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQY 329 (429)
Q Consensus 251 ~~~~~~~~~~~-~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~ 329 (429)
.- ...-+.+ .+++ ..|.++++ |-+.++...|.++.+.. .. + +..+.. .+++.|.+ ....+..
T Consensus 269 GR--TG~~fa~E~~gv-~PDivt~a--K~ig~G~Pl~avv~r~e-i~-~-------~~~g~~-~~Tf~GNp--va~Aaa~ 331 (447)
T COG0160 269 GR--TGKMFAFEHFGV-EPDIVTLA--KSLGGGLPLSAVVGRAE-IM-D-------WPPGGH-GGTFGGNP--VACAAAL 331 (447)
T ss_pred Cc--cccchhhhhcCC-CCCEEEec--ccccCCCceeEEeccHH-hc-c-------cCCccc-CCCCCcCH--HHHHHHH
Confidence 42 1111111 1123 36777743 65666777888777542 21 1 111111 01111222 3344444
Q ss_pred HHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEeeCCCCce-EEEEEecCCC--CCCHHHHHHHHHHHHhccCce
Q 014163 330 YQFIRLGFEGYKNIMENCMGNARALREGLEKTG-RFEILSKDVGVP-LVAFSLKDSS--AHTVFEISEGLRKKLNRFQVV 405 (429)
Q Consensus 330 ~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~-~v~f~~~~~~--~~~~~~~~~~L~~~l~~~G~~ 405 (429)
++|+.+.++ ...++..++-+++++.|.++- .+.++++....+ .+.+.+..+. .....++++++.+++.++|+.
T Consensus 332 AvL~vie~e---~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Gli 408 (447)
T COG0160 332 AVLDVIEEE---NLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFERGLL 408 (447)
T ss_pred HHHHHHHHc---cHHHHHHHHHHHHHHHHHHHHhhcCceecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHcCCE
Confidence 555544443 677778888888888887652 244555532223 3444443221 123347777888888899988
Q ss_pred ecccCCCCCCCceEEEEE
Q 014163 406 YPQKLPMSYPWSTKLRVI 423 (429)
Q Consensus 406 ~~~~~~~~~~~~~~lRi~ 423 (429)
+..+ -.+.+.||+.
T Consensus 409 l~~~----G~~~nviRi~ 422 (447)
T COG0160 409 LLTC----GPHGNVLRIL 422 (447)
T ss_pred Eecc----CCCCcEEEEe
Confidence 7653 1235568875
No 332
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.19 E-value=1.2e-08 Score=101.50 Aligned_cols=335 Identities=12% Similarity=-0.054 Sum_probs=166.3
Q ss_pred CCCCCcccccccc----CCChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchH
Q 014163 53 DGNPRLNLASFVT----TWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (429)
Q Consensus 53 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~ 128 (429)
+|+.++.+.++.. ...+|.+.+++.+.+++-.... ......+.+.++.+.+++++.-.. ....++++|+|
T Consensus 44 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~-~~~~~~~~~~~la~~l~~~~p~~~-----~~v~f~~sGse 117 (442)
T PRK13360 44 DGRRVLDGTAGLWCVNAGHGRPEIVEAVRAQAGELDYAP-AFQMGHPKAFELANRIAEIAPGGL-----NHVFFTNSGSE 117 (442)
T ss_pred CCCEEEECchhHHHhccCCCCHHHHHHHHHHHHhCCCcc-cCCcCCHHHHHHHHHHHHhCCCCC-----CEEEEeCCcHH
Confidence 4565554444321 2456888888877776422111 111122334466677777763211 13789999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCC-CchHHHHHHHhcC------------ceeEEEeccCC--c--cc--
Q 014163 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGAN-VQVCWEKFARYFE------------VELKEVKLEEG--Y--YV-- 189 (429)
Q Consensus 129 a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~-~h~s~~~~~~~~G------------~~v~~v~~~~~--~--~~-- 189 (429)
|+..|++.++..... .|. .++..|+.-.. .|....-+....| -.+..+|...+ . +.
T Consensus 118 A~e~AlklAr~~~~~----~g~-~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 192 (442)
T PRK13360 118 SVDTALKIALAYHRA----RGE-GSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKG 192 (442)
T ss_pred HHHHHHHHHHHHHHh----cCC-CCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCC
Confidence 999999998864211 111 12345665444 4443222221111 12333443210 0 00
Q ss_pred ------cCHHHHHHHhhh----CCeEEEEeeCCCccccccC----hHHHHHHHHHhhhccCCCccEEeeccccccccccc
Q 014163 190 ------MNPVKAVELVDE----NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (429)
Q Consensus 190 ------~d~~~l~~~i~~----~~~~v~~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (429)
-.+++|++++.. +..+|++--.....|.+.| +++|.++|++| |+++++|+++.|+.. .
T Consensus 193 ~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~------g~llI~DEv~tG~Gr--t 264 (442)
T PRK13360 193 QPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKH------GILLIFDEVITGFGR--L 264 (442)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCC--C
Confidence 125678888752 3445555554555677777 99999999999 999999999955321 1
Q ss_pred CCCCcc-ccCCCCeeEEEEcCcccCCCC-CCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHH
Q 014163 256 YPDLEW-DFRLPLVKSINVSGHKYGLVY-AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFI 333 (429)
Q Consensus 256 ~~~~~~-~~~~~~~d~~~~s~hK~~~~p-~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~ 333 (429)
..-+.. .+++ ..|.+++ -|.+.++ ..+|.++.+++ .. +.+..............++.+.+ ....+..++|+
T Consensus 265 G~~~a~~~~gv-~PDivt~--gK~l~gG~~P~gav~~~~~-i~-~~~~~~~~~~~~~~~~~T~~g~p--l~~aaa~a~L~ 337 (442)
T PRK13360 265 GAPFAAQYFGV-TPDLLTC--AKGLTNGAIPMGAVFVSSE-IH-DAFMQGPEAGIEFFHGYTYSGHP--LACAAALATLD 337 (442)
T ss_pred ccchhhhhcCC-CCceeee--eeccccCccceEEEEEcHH-HH-HHhhcCCccccccccCCCCCCCH--HHHHHHHHHHH
Confidence 111111 1122 2566544 4655443 34666666532 21 22111110000000011222222 34555666676
Q ss_pred HcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCce-EEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCC
Q 014163 334 RLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVP-LVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPM 412 (429)
Q Consensus 334 ~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~ 412 (429)
.+.++ ...++..++.+++.+.|+++..+..+.+....+ +..+.+.+... ...+....+.+++.++|+.+...
T Consensus 338 ~l~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~~~~l~~~~~-~~~~~~~~~~~~l~~~Gvl~~~~--- 410 (442)
T PRK13360 338 LYERE---GLLTRAARLAPYWEDALHSLRDAPHVIDIRNLGLVGAVELAPRDG-KPGKRAYEVFLKCFEKGLMIRYT--- 410 (442)
T ss_pred HHHhC---CHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEEecCCC-CcchhHHHHHHHHHHCCcEEEec---
Confidence 66554 355677778888888887653222222211122 23333332111 11122233444444999987531
Q ss_pred CCCCceEEEEEe
Q 014163 413 SYPWSTKLRVIS 424 (429)
Q Consensus 413 ~~~~~~~lRi~~ 424 (429)
...+|++.
T Consensus 411 ----~~~lr~~P 418 (442)
T PRK13360 411 ----GDILALSP 418 (442)
T ss_pred ----CCEEEEeC
Confidence 13588874
No 333
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.19 E-value=9.3e-09 Score=102.40 Aligned_cols=332 Identities=11% Similarity=-0.015 Sum_probs=165.6
Q ss_pred CCCCCcccccccc----CCChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchH
Q 014163 53 DGNPRLNLASFVT----TWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (429)
Q Consensus 53 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~ 128 (429)
+++.++.+.++.. ...+|.+.+++.+.+++-..... .....+...++.+.|++++.... ....++++|+|
T Consensus 47 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~~~-~~~~~~~~~~la~~L~~~~p~~~-----~~v~f~~sGse 120 (445)
T PRK09221 47 DGRKILDGTAGLWCCNAGHGRPEIVEAVARQAATLDYAPA-FQMGHPLAFELAERLAELAPGGL-----DHVFFTNSGSE 120 (445)
T ss_pred CCCEEEEccccHhhccCCCCCHHHHHHHHHHHHhccCccc-cccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCCcHH
Confidence 4555444433321 23568888888777765221111 11112333456667777764221 13889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEE-cCCCchHHHHHHHhcC------------ceeEEEeccC-C-c--c---
Q 014163 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVT-GANVQVCWEKFARYFE------------VELKEVKLEE-G-Y--Y--- 188 (429)
Q Consensus 129 a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~-~~~~h~s~~~~~~~~G------------~~v~~v~~~~-~-~--~--- 188 (429)
|+..|++.++..... .|.+ .+..|+. ....|....-+....| ..+..+|... . . +
T Consensus 121 Ave~AlklAr~~~~~----~g~~-~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (445)
T PRK09221 121 SVDTALKIALAYHRA----RGQG-TRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKG 195 (445)
T ss_pred HHHHHHHHHHHHHHh----cCCC-CCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCC
Confidence 999999998764211 1111 1245654 4445543222221111 1123343211 0 0 0
Q ss_pred -----ccCHHHHHHHhhh----CCeEEEEeeCCCccccccC----hHHHHHHHHHhhhccCCCccEEeeccccccccccc
Q 014163 189 -----VMNPVKAVELVDE----NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (429)
Q Consensus 189 -----~~d~~~l~~~i~~----~~~~v~~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (429)
.-..+++++.++. +..+|++--.....|.+.| +++|.++|++| |+++++|+++.|+.- .
T Consensus 196 ~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~------g~llI~DEV~tG~GR--t 267 (445)
T PRK09221 196 QPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKH------GILLIFDEVITGFGR--L 267 (445)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHc------CCEEEEeehhhCCCc--C
Confidence 0124577777752 3456666655566788877 99999999999 999999999965321 1
Q ss_pred CCCCcc-ccCCCCeeEEEEcCcccCCCC-CCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHH
Q 014163 256 YPDLEW-DFRLPLVKSINVSGHKYGLVY-AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFI 333 (429)
Q Consensus 256 ~~~~~~-~~~~~~~d~~~~s~hK~~~~p-~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~ 333 (429)
...+.. .+++ ..|.++++ |.+.++ ..+|.++.+++ .. +.+.....+........++.+ .+ ....+..++|+
T Consensus 268 G~~~~~~~~gv-~PDi~~~g--K~l~gG~~Pi~av~~~~~-i~-~~~~~~~~~~~~~~~~~T~~~-~p-l~~aaa~a~L~ 340 (445)
T PRK09221 268 GAAFAAERFGV-TPDIITFA--KGLTNGAIPMGAVIASDE-IY-DAFMQGPEYAIEFFHGYTYSA-HP-VACAAGLATLD 340 (445)
T ss_pred chhhHHHhcCC-CCCEEEec--cccccCcccceeeEEcHH-HH-HhhccCcccccccccccCCCc-CH-HHHHHHHHHHH
Confidence 110000 1122 24665543 544333 23555665532 21 222111111000000112212 21 23444456666
Q ss_pred HcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCce-EEEEEecCCC---CCCHHHHHHHHHHHHhccCceeccc
Q 014163 334 RLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVP-LVAFSLKDSS---AHTVFEISEGLRKKLNRFQVVYPQK 409 (429)
Q Consensus 334 ~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~-~v~f~~~~~~---~~~~~~~~~~L~~~l~~~G~~~~~~ 409 (429)
.+..+ ...++..++.++|++.|+++.+...+.+....+ +..+.+.+.. ......+.+.|. ++|+.+...
T Consensus 341 ~i~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~~~~~~~~~~~~~~~~----~~Gv~~~~~ 413 (445)
T PRK09221 341 IYREE---DLFERAAELAPYFEDAVHSLKGLPHVIDIRNIGLVAGIELAPRPGAPGARGYEAFMKCF----EKGLLVRYT 413 (445)
T ss_pred HHHhc---cHHHHHHHHHHHHHHHHHhhccCCCEEEEecCceEEEEEEecccccccchHHHHHHHHH----HCCeEEeec
Confidence 66444 356788888999999888763232222211222 3344443211 112234445555 999887531
Q ss_pred CCCCCCCceEEEEEe
Q 014163 410 LPMSYPWSTKLRVIS 424 (429)
Q Consensus 410 ~~~~~~~~~~lRi~~ 424 (429)
...+|++.
T Consensus 414 -------~~~lr~~P 421 (445)
T PRK09221 414 -------GDTIALSP 421 (445)
T ss_pred -------CCEEEEEC
Confidence 13588874
No 334
>PRK06541 hypothetical protein; Provisional
Probab=99.19 E-value=1.6e-08 Score=101.09 Aligned_cols=322 Identities=13% Similarity=0.034 Sum_probs=166.0
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
..+|.+.+++.+.+++.... .......+...++.+.+.+++..+. ....++++|+||+..|++.++.....
T Consensus 68 h~~p~v~~Av~~q~~~~~~~-~~~~~~~~~~~~la~~l~~~~p~~~-----~~v~f~~sGseAve~AlklAr~~~~~--- 138 (460)
T PRK06541 68 HGRAELAEAAAKQAGTLAFF-PLWSYAHPPAIELAERLAALAPGDL-----NRVFFTTGGSEAVESAWKLAKQYFKL--- 138 (460)
T ss_pred CCCHHHHHHHHHHHhhCcCc-cccccCCHHHHHHHHHHHHhCCCCc-----CEEEEcCCcHHHHHHHHHHHHHHHHh---
Confidence 34688888888777653211 1111122333456666777654321 13889999999999999998764211
Q ss_pred hcCCCCCCcEEEE-cCCCchHHHHHHHhcCc------------eeEEEeccCCc----cccC--------HHHHHHHhhh
Q 014163 147 EQGKPYDKPNIVT-GANVQVCWEKFARYFEV------------ELKEVKLEEGY----YVMN--------PVKAVELVDE 201 (429)
Q Consensus 147 ~~g~~~~~~~vi~-~~~~h~s~~~~~~~~G~------------~v~~v~~~~~~----~~~d--------~~~l~~~i~~ 201 (429)
.|.+ ++..|+. ....|....-+....|. ++..+|..... +.-+ ++.+++.+..
T Consensus 139 -~g~~-~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 216 (460)
T PRK06541 139 -TGKP-GKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEF 216 (460)
T ss_pred -cCCC-CccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHh
Confidence 1111 1345554 44455443333222221 13334322100 1011 3678887762
Q ss_pred ---CCeEEEEeeC-CCccccccC----hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc-ccCCCCeeEEE
Q 014163 202 ---NTICVAAILG-STLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSIN 272 (429)
Q Consensus 202 ---~~~~v~~~~~-~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~d~~~ 272 (429)
+..+.+++-| .+..|.+.+ +++|.++|++| |+++++|+++.++.- ....+.. .+++ ..|.++
T Consensus 217 ~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~------g~llI~DEV~tGfGR--~G~~~a~~~~gv-~PDivt 287 (460)
T PRK06541 217 EGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRY------DVLLVSDEVICAFGR--LGEMFGCERFGY-VPDIIT 287 (460)
T ss_pred cCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc--CchhhhhhhcCC-CCCEEE
Confidence 3444444444 677788877 99999999999 999999999955321 1111011 1122 356665
Q ss_pred EcCcccCCCCC-CeEEEEEeCCCCccccccccc-CCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHH
Q 014163 273 VSGHKYGLVYA-GVGWVVWRTKDDLPDELVFHI-NYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGN 350 (429)
Q Consensus 273 ~s~hK~~~~p~-g~g~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~ 350 (429)
.-|.+.+++ .+|.++.+++ .. +.+.... .+.. ..++.+.+ ....+..++++.+..+ +..++..++
T Consensus 288 --~gK~l~~G~~pigav~~~~~-i~-~~~~~~~~~~~~----~~T~~gnp--~~~aaala~l~~l~~~---~~~~~~~~~ 354 (460)
T PRK06541 288 --CAKGITSGYSPLGAMIASDR-LF-EPFLDGPTMFLH----GYTFGGHP--VSAAVALANLDIFERE---GLLDHVRDN 354 (460)
T ss_pred --ecccccCCccceeEEEEcHH-HH-HHhhcCCCcccc----CCCCCCCH--HHHHHHHHHHHHHHhc---cHHHHHHHH
Confidence 346666655 6788777543 21 2111110 0000 00111111 3344444555555443 355777888
Q ss_pred HHHHHHHHHhCCCeEEeeC-CCCceEEEEEecCCC----CCC---HH-HHHHHHHHHHhccCceecccCCCCCCCceEEE
Q 014163 351 ARALREGLEKTGRFEILSK-DVGVPLVAFSLKDSS----AHT---VF-EISEGLRKKLNRFQVVYPQKLPMSYPWSTKLR 421 (429)
Q Consensus 351 ~~~l~~~L~~~~~~~~~~~-~~~~~~v~f~~~~~~----~~~---~~-~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lR 421 (429)
.++|.+.|+++....++.. .....++.+.+.... ..+ .. .+...+.+++.++|+.+... ..+...||
T Consensus 355 g~~l~~~L~~l~~~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~----~~g~~~lr 430 (460)
T PRK06541 355 EPAFRATLEKLLDLPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRAD----DRGDPVVQ 430 (460)
T ss_pred HHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHHHhCCeEEEec----CCCCCEEE
Confidence 8888888887632222211 113345555553211 010 01 12234555555999987531 12345688
Q ss_pred EEec
Q 014163 422 VISH 425 (429)
Q Consensus 422 i~~~ 425 (429)
++..
T Consensus 431 l~Pp 434 (460)
T PRK06541 431 LAPP 434 (460)
T ss_pred EECC
Confidence 8764
No 335
>PRK06105 aminotransferase; Provisional
Probab=99.16 E-value=1.9e-08 Score=100.65 Aligned_cols=336 Identities=11% Similarity=-0.007 Sum_probs=169.0
Q ss_pred CCCCCccccccc----cCCChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchH
Q 014163 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (429)
Q Consensus 53 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~ 128 (429)
+|+.++.+.++. -...+|.+.+++.+.+++.......+....+.+.++.+.|++++..+. ....++++|+|
T Consensus 46 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGse 120 (460)
T PRK06105 46 AGKRYIEGMAGLWSVALGFSEQRLVEAAARQMKKLPFYHTFSHKSHGPVIDLAEKLVAMAPVPM-----SKVFFTNSGSE 120 (460)
T ss_pred CCCEEEEcchhHHhccCCCCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCCcHH
Confidence 455555444442 224568888888887765322111111223344456677777764321 13789999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEE-cCCCchHHHHHHHhcCc------------eeEEEeccCCccc------
Q 014163 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVT-GANVQVCWEKFARYFEV------------ELKEVKLEEGYYV------ 189 (429)
Q Consensus 129 a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~-~~~~h~s~~~~~~~~G~------------~v~~v~~~~~~~~------ 189 (429)
|+..|++.++..... .|.. ++.+|+. ....|.....+....|. .+..+|.... ++
T Consensus 121 Ave~AlKlar~~~~~----~g~t-~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~ 194 (460)
T PRK06105 121 ANDTVVKLVWYYNNA----LGRP-EKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHY-YRFGLPGE 194 (460)
T ss_pred HHHHHHHHHHHHHHh----cCCC-CCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcc-cccccCCC
Confidence 999999998753211 1111 2345655 44455543333222221 1222322110 01
Q ss_pred -------cCHHHHHHHhh----hCCeEEEEeeCCCccccccC----hHHHHHHHHHhhhccCCCccEEeecccccccccc
Q 014163 190 -------MNPVKAVELVD----ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (429)
Q Consensus 190 -------~d~~~l~~~i~----~~~~~v~~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (429)
-..+++++++. ++..+|++--....-|.+.+ ++++.++|++| |+++++|+++.|+..
T Consensus 195 ~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~------~~llI~DEv~tG~GR-- 266 (460)
T PRK06105 195 SEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKY------DILLVADEVICGFGR-- 266 (460)
T ss_pred ChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc------CCeEEEeccccCCCc--
Confidence 12466777774 23455555444445566666 89999999999 999999999965421
Q ss_pred cCCCCcc-ccCCCCeeEEEEcCcccCCCC-CCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHH
Q 014163 255 LYPDLEW-DFRLPLVKSINVSGHKYGLVY-AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (429)
Q Consensus 255 ~~~~~~~-~~~~~~~d~~~~s~hK~~~~p-~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al 332 (429)
...-+.. .+++ ..|.+++ -|.+.++ ..+|.++.+++ +.+.+.......+...-..++.|.+ ....+..++|
T Consensus 267 tG~~f~~~~~~v-~PDi~~~--gK~lggG~~P~~av~~~~~--i~~~~~~~~~~~~~~~h~~T~~gnp--l~~aaa~a~L 339 (460)
T PRK06105 267 TGNMFGCETFGI-KPDILVM--SKQLSSSYQPLSAVLMNEK--VYDPIADESGKIGTFGHGFTASGHP--VAAAVALENL 339 (460)
T ss_pred CchhhhHHhcCC-CCCeeee--ecccccCcccceEEEEcHH--HHHHHhcccccCcccccCCCCCCCH--HHHHHHHHHH
Confidence 1111111 1122 2666553 3655554 34666676542 2122111100000000011111222 2334455566
Q ss_pred HHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC-CceEEEEEecCCC----CC-CHHHHHHHHHHHHhccCcee
Q 014163 333 IRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV-GVPLVAFSLKDSS----AH-TVFEISEGLRKKLNRFQVVY 406 (429)
Q Consensus 333 ~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~~v~f~~~~~~----~~-~~~~~~~~L~~~l~~~G~~~ 406 (429)
+.+.++ +..++..++.++|.+.|+++....++.... ...+..+.+.... .. ....++..+.+++.++|+.+
T Consensus 340 ~~i~~~---~l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~Gvl~ 416 (460)
T PRK06105 340 AIIEER---DLVGNAAERGARLQARLRALADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGARANAAAHEHGVIS 416 (460)
T ss_pred HHHHhc---cHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHHHHHHHHHHCCeEE
Confidence 665543 456777778888888887653222222211 2334556553211 11 11234455666666999887
Q ss_pred cccCCCCCCCceEEEEEe
Q 014163 407 PQKLPMSYPWSTKLRVIS 424 (429)
Q Consensus 407 ~~~~~~~~~~~~~lRi~~ 424 (429)
... + ..+|++.
T Consensus 417 ~~~------g-~~i~l~P 427 (460)
T PRK06105 417 RAM------G-DTLAFCP 427 (460)
T ss_pred Eec------C-CEEEEEC
Confidence 531 1 3578764
No 336
>PRK05965 hypothetical protein; Provisional
Probab=99.14 E-value=3.2e-08 Score=98.92 Aligned_cols=337 Identities=11% Similarity=-0.000 Sum_probs=170.9
Q ss_pred CCCCCcccccccc----CCChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchH
Q 014163 53 DGNPRLNLASFVT----TWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (429)
Q Consensus 53 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~ 128 (429)
+|+.++.+.++.. ...+|.+.+++.+.+++-......+....+.+.++.+.|.+++.-+. ....++++|||
T Consensus 44 dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~sGSE 118 (459)
T PRK05965 44 SGHQLLDAFAGLWCVNVGYGQESIVEAAAEQMRELPYATGYFHFGSEPAIRLAAKLAERAPGSL-----NHVYFTLGGSD 118 (459)
T ss_pred CCCEEEECcccHHhccCCCCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHhhCCCCc-----CEEEEeCChhH
Confidence 4555554444322 24468888888877765322111111123334466677777653221 13889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcC-CCchHHHHHHHhcCc------------eeEEEeccCC-c--cccC-
Q 014163 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGA-NVQVCWEKFARYFEV------------ELKEVKLEEG-Y--YVMN- 191 (429)
Q Consensus 129 a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~-~~h~s~~~~~~~~G~------------~v~~v~~~~~-~--~~~d- 191 (429)
|+..|++.++..+.. .|.. ++..|+.-. ..|.....+....|. .+..+|.... . +.-|
T Consensus 119 Ave~AlKlAr~~~~~----~g~~-~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (459)
T PRK05965 119 AVDSAVRFIRHYWNA----TGRP-SKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDP 193 (459)
T ss_pred HHHHHHHHHHHHHHh----cCCC-CccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCCh
Confidence 999999998764311 1211 134566544 455433222222121 1233432210 0 0112
Q ss_pred -------HHHHHHHhhh----CCeEEEEeeCCCccccc----cChHHHHHHHHHhhhccCCCccEEeecccccccccccC
Q 014163 192 -------PVKAVELVDE----NTICVAAILGSTLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY 256 (429)
Q Consensus 192 -------~~~l~~~i~~----~~~~v~~~~~~~~tG~~----~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~ 256 (429)
++.+++.+.. +..+|++--.....|.+ +=++++.++|++| |+++|+|+++.|+.- ..
T Consensus 194 ~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~------gillI~DEV~tGfGR--tG 265 (459)
T PRK05965 194 QAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACREL------GILFVADEVITGFGR--TG 265 (459)
T ss_pred HHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhccCcc--Cc
Confidence 3577777763 34555554444444554 2378999999999 999999999977521 11
Q ss_pred CCCcc-ccCCCCeeEEEEcCcccCCCCC-CeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHH
Q 014163 257 PDLEW-DFRLPLVKSINVSGHKYGLVYA-GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIR 334 (429)
Q Consensus 257 ~~~~~-~~~~~~~d~~~~s~hK~~~~p~-g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~ 334 (429)
.-+.. .+++ ..|.+++ -|.+.+++ .+|.++.+++ .. +.+...........-..|+.|.+ ....+..++|+.
T Consensus 266 ~~~a~~~~gv-~PDiv~~--gKgl~gG~~Pi~av~~~~~-i~-~~~~~~~~~~~~~~h~~T~~gnp--l~~Aaa~a~L~~ 338 (459)
T PRK05965 266 PLFACEAEGV-VPDLMTV--AKGLTSGYVPMGAVLMSDH-VY-QGIADGAGAAAPVGHGYTYSAHP--VSAAVGLEVLRL 338 (459)
T ss_pred hhhhHhhcCC-CCCeEEe--chhhccCCcceeEEEEcHH-HH-HHHhccccccccccccCCCCCCH--HHHHHHHHHHHH
Confidence 11111 1122 2677665 37666663 6777777542 21 22111000000000001111222 334445555665
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC-CceEEEEEecCCC----CCC-HHHHHHHHHHHHhccCceecc
Q 014163 335 LGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV-GVPLVAFSLKDSS----AHT-VFEISEGLRKKLNRFQVVYPQ 408 (429)
Q Consensus 335 l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~~v~f~~~~~~----~~~-~~~~~~~L~~~l~~~G~~~~~ 408 (429)
+.++ +..++..++.++|.+.|+++....++..-. ...++.+.+.... ..+ ..++...+.+++.++|+.+..
T Consensus 339 l~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~ 415 (459)
T PRK05965 339 YHEG---GLLANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLGALELVADKATKTPFDAALDPADRIFDRAYANGLVFRA 415 (459)
T ss_pred HHhc---cHHHHHHHHHHHHHHHHHhhccCCCEEEEeecceEEEEEEeccccccCCCCchhHHHHHHHHHHHhCCeEEEe
Confidence 5443 456667788888888887653222222211 2334555553211 001 124556666666699998753
Q ss_pred cCCCCCCCceEEEEE
Q 014163 409 KLPMSYPWSTKLRVI 423 (429)
Q Consensus 409 ~~~~~~~~~~~lRi~ 423 (429)
. +..++|++
T Consensus 416 ~------g~~~i~~~ 424 (459)
T PRK05965 416 F------GDGVLGFA 424 (459)
T ss_pred c------CCcEEEEE
Confidence 1 33457876
No 337
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.14 E-value=2.5e-08 Score=95.36 Aligned_cols=305 Identities=13% Similarity=0.027 Sum_probs=172.1
Q ss_pred CCCCCccccccccC----CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchH
Q 014163 53 DGNPRLNLASFVTT----WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (429)
Q Consensus 53 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~ 128 (429)
++|.++.+...+.. ..+|.+.+++.+.+.... .+...+++|-++.+.+.++++.-+ ..-++++|||
T Consensus 51 DGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G~----~fg~Pte~Ei~~Aell~~~~p~~e------~vrfvnSGTE 120 (432)
T COG0001 51 DGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERGL----SFGAPTELEVELAELLIERVPSIE------KVRFVNSGTE 120 (432)
T ss_pred CCCEeeehhccCcccccCCCCHHHHHHHHHHHHhcC----CCCCCCHHHHHHHHHHHHhcCccc------EEEEecchhH
Confidence 45555443333332 346788899888887653 233456777788888999887632 2889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCC-CchHHHHHHHhcC-------------ce------eEEEeccCCcc
Q 014163 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGAN-VQVCWEKFARYFE-------------VE------LKEVKLEEGYY 188 (429)
Q Consensus 129 a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~-~h~s~~~~~~~~G-------------~~------v~~v~~~~~~~ 188 (429)
|++.|++.+|... +++.|+..+. .|.......-..| +. +..+|.
T Consensus 121 AtmsAiRlARa~T-----------gR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~y----- 184 (432)
T COG0001 121 ATMSAIRLARAYT-----------GRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPY----- 184 (432)
T ss_pred HHHHHHHHHHHhh-----------CCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecC-----
Confidence 9999999998631 3456665554 5544333322222 11 122221
Q ss_pred ccCHHHHHHHhhhC---CeEEEEeeCCCccccccC----hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc
Q 014163 189 VMNPVKAVELVDEN---TICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW 261 (429)
Q Consensus 189 ~~d~~~l~~~i~~~---~~~v~~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~ 261 (429)
=|++.+++++.+. ..+|++--.-...|.+.| +++|.++|+++ |+.+|.|++..+|-.++-. .+-
T Consensus 185 -ND~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~------G~lLI~DEViTGFR~~~gG--aq~ 255 (432)
T COG0001 185 -NDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEH------GALLIFDEVITGFRVALGG--AQG 255 (432)
T ss_pred -CCHHHHHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHc------CcEEEEecchhhcccCCcc--ccc
Confidence 2789999999874 345555544556677644 67899999999 9999999998765332111 111
Q ss_pred ccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCch--hHHHHHHHHHHHcCH-H
Q 014163 262 DFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGS--SQIIAQYYQFIRLGF-E 338 (429)
Q Consensus 262 ~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~--~~~~~~~~al~~l~~-~ 338 (429)
.+++. .|..+ .-|.++++..+|.+-.|. +...........|.. ||-++ ..+.+..++++.+.. +
T Consensus 256 ~~gi~-PDltt--lGKiIGGGlP~ga~gGr~-eiM~~~~p~g~vyqa---------GT~sgnplamaAG~atl~~l~~~~ 322 (432)
T COG0001 256 YYGVE-PDLTT--LGKIIGGGLPIGAFGGRA-EIMEQLAPLGPVYQA---------GTLSGNPLAMAAGLATLEELMTEE 322 (432)
T ss_pred ccCcC-cchhh--hhhhhcCCcceeeeccHH-HHHhhhCCCCCcccc---------CCCCCcHHHHHHHHHHHHHHHhcc
Confidence 11221 44433 348888888888876543 222111111112222 23322 445556666666654 3
Q ss_pred H-HHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCC--------CCHHHHHHHHHHHHhccCceecc
Q 014163 339 G-YKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSA--------HTVFEISEGLRKKLNRFQVVYPQ 408 (429)
Q Consensus 339 g-~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~--------~~~~~~~~~L~~~l~~~G~~~~~ 408 (429)
+ ++.+.+.-.++++-+.+.+.+.+ +.+.... ..+.+++.+...+. -+.+.+.+.+ ..|.++|+.+.+
T Consensus 323 ~~y~~l~~~~~~L~~gl~~~~~~~g-~~~~v~~-~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~-~~~l~~GV~l~p 398 (432)
T COG0001 323 GVYERLDALGERLAEGLRAAAERHG-IPLTVNR-VGSMFGIFFTEEGVRNYADAKRSDVERFAKFF-HHLLNRGVYLAP 398 (432)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEee-ecceEEEEecCCCCCCHHHHHhhchHHHHHHH-HHHHhCCcccCC
Confidence 3 45554444555555555555554 4443332 23444444433111 1222233333 366699988653
No 338
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.13 E-value=2.2e-07 Score=92.13 Aligned_cols=326 Identities=12% Similarity=0.009 Sum_probs=165.4
Q ss_pred CCCCCcccccccc----CCChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchH
Q 014163 53 DGNPRLNLASFVT----TWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (429)
Q Consensus 53 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~ 128 (429)
+|+.++.+.++.. ...+|.+.+++.+.+++-... .......+...++.+.+.+++.-... ....++++|||
T Consensus 38 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~ql~~l~~~-~~~~~~~~~~~~la~~l~~~~p~~~~----~~v~f~~SGse 112 (425)
T PRK07495 38 EGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHT-CHQVVPYENYVRLAERLNALVPGDFA----KKTIFVTTGAE 112 (425)
T ss_pred CCCEEEEccccHHhhccCCCCHHHHHHHHHHHhhccCc-ccCccCCHHHHHHHHHHHHhCCCCCC----CEEEECCchHH
Confidence 4554444444322 245688888888777653221 11111223344566677777642210 13889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcC-CCchHHHHHHHhcC--------c-----eeEEEeccCCccccC---
Q 014163 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGA-NVQVCWEKFARYFE--------V-----ELKEVKLEEGYYVMN--- 191 (429)
Q Consensus 129 a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~-~~h~s~~~~~~~~G--------~-----~v~~v~~~~~~~~~d--- 191 (429)
|+..|++.++.. . +++.|+.-. ..|....-+....| . .+..+|.......++
T Consensus 113 A~e~AlklAr~~-------t----gr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 181 (425)
T PRK07495 113 AVENAVKIARAA-------T----GRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQ 181 (425)
T ss_pred HHHHHHHHHHHh-------h----CCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCcccccccHHH
Confidence 999999998763 1 235566544 45543322222111 1 234455432111122
Q ss_pred -HHHHHHHhhh-----CCeEEEEeeCCCccccc----cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc
Q 014163 192 -PVKAVELVDE-----NTICVAAILGSTLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW 261 (429)
Q Consensus 192 -~~~l~~~i~~-----~~~~v~~~~~~~~tG~~----~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~ 261 (429)
++++++.+.. +..+|++.-.....|.+ +-+++|.++|++| |+++++|++|.++.. ...-+..
T Consensus 182 ~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~------g~llI~DEv~tG~gr--~G~~~a~ 253 (425)
T PRK07495 182 SLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQH------GILLIADEVQTGFAR--TGKLFAM 253 (425)
T ss_pred HHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhcCCc--CCCceee
Confidence 4555777642 34555554443345644 2389999999999 999999999976421 1111111
Q ss_pred c-cCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHH
Q 014163 262 D-FRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGY 340 (429)
Q Consensus 262 ~-~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~ 340 (429)
. +++ ..|.+++ -|.+.++..+|+++.+++ +.+.+. .... ..++.+.+ ....+..++++.+..+
T Consensus 254 ~~~gv-~pDi~tl--sK~l~~G~pigav~~~~~--i~~~~~--~~~~-----~~T~~~~p--l~~aaa~a~l~~l~~~-- 317 (425)
T PRK07495 254 EHHEV-AADLTTM--AKGLAGGFPLAAVTGRAE--IMDAPG--PGGL-----GGTYGGNP--LGIAAAHAVLDVIEEE-- 317 (425)
T ss_pred cccCC-CCCEEee--hhhhcCCccceEEEEcHH--HHhccC--CCCc-----CCCCCCCH--HHHHHHHHHHHHHHhc--
Confidence 1 111 2455443 476666677888887542 212211 1111 11111222 3344444666666443
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCC-eEEeeC-CCCceEEEEEecCCCC-CCHHHHHHHHHHHHhccCceecccCCCCCCCc
Q 014163 341 KNIMENCMGNARALREGLEKTGR-FEILSK-DVGVPLVAFSLKDSSA-HTVFEISEGLRKKLNRFQVVYPQKLPMSYPWS 417 (429)
Q Consensus 341 ~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~-~~~~~~v~f~~~~~~~-~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~ 417 (429)
+..++..++.++|.+.|+++-. +..+.. ....-++.+.+.+... ....++...+.+++.++|+.+... . .+.
T Consensus 318 -~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~---g-~~~ 392 (425)
T PRK07495 318 -DLCERANQLGNRLKQRLASLRETVPEIADIRGPGFMNAVEFNDADSGLPSAEFANRVRLKALEKGLILLTC---G-VHG 392 (425)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHhhCCCeeeeecCceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeec---C-CCC
Confidence 3455566666666666655311 111111 1123344555543211 111234566666667999887532 1 112
Q ss_pred eEEEEE
Q 014163 418 TKLRVI 423 (429)
Q Consensus 418 ~~lRi~ 423 (429)
..+|++
T Consensus 393 ~~~r~~ 398 (425)
T PRK07495 393 NVIRFL 398 (425)
T ss_pred CEEEEe
Confidence 458876
No 339
>PRK07678 aminotransferase; Validated
Probab=99.11 E-value=1.5e-07 Score=94.04 Aligned_cols=337 Identities=12% Similarity=0.002 Sum_probs=168.7
Q ss_pred CCCCCccccccc----cCCChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchH
Q 014163 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (429)
Q Consensus 53 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~ 128 (429)
+|+.++.+.++. -...+|.+.+++.+.++.-......+ ..+.+.++.+.+.++++... ...++++|||
T Consensus 45 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~~~--~~~~~~~lae~l~~~~~~~~------~v~f~~sGse 116 (451)
T PRK07678 45 QGNRYLDGMSGLWCVNVGYGRKELAEAAYEQLKTLSYFPLTQ--SHEPAIKLAEKLNEWLGGEY------VIFFSNSGSE 116 (451)
T ss_pred CCCEEEEccccHHhhcCCCCCHHHHHHHHHHHHhcCcccccc--CCHHHHHHHHHHHHhCCCCC------EEEEeCCcHH
Confidence 455544443332 12446888888877766432211111 12334456677777765431 3889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCC-CchHHHHHHHhcCc------------eeEEEeccCCcccc-----
Q 014163 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGAN-VQVCWEKFARYFEV------------ELKEVKLEEGYYVM----- 190 (429)
Q Consensus 129 a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~-~h~s~~~~~~~~G~------------~v~~v~~~~~~~~~----- 190 (429)
|+..|++.++..... .|.+ ++..|+.-.. .|....-+....|. .+..+|.... ++.
T Consensus 117 A~e~AlklAr~~t~~----~g~~-~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 190 (451)
T PRK07678 117 ANETAFKIARQYHAQ----KGEP-HRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDC-YRMPGIES 190 (451)
T ss_pred HHHHHHHHHHHHHHh----cCCC-CCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCCCcc-ccccccCC
Confidence 999999999864311 1111 1345665444 45433333222221 1333432211 111
Q ss_pred ----C---HHHHHHHhh----hCCeEEEEeeCCCccccccC----hHHHHHHHHHhhhccCCCccEEeeccccccccccc
Q 014163 191 ----N---PVKAVELVD----ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (429)
Q Consensus 191 ----d---~~~l~~~i~----~~~~~v~~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (429)
| ++.+++.++ ++..+|++--.....|.+.| ++++.++|++| |+++|+|+++.|+.- .
T Consensus 191 ~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~------g~llI~DEV~tGfGR--t 262 (451)
T PRK07678 191 EDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKH------GALLISDEVICGFGR--T 262 (451)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHc------CCEEEEeehhhcCCc--C
Confidence 1 234566664 23455555444444566644 89999999999 999999999966421 1
Q ss_pred CCCCcc-ccCCCCeeEEEEcCcccCCCC-CCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHH
Q 014163 256 YPDLEW-DFRLPLVKSINVSGHKYGLVY-AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFI 333 (429)
Q Consensus 256 ~~~~~~-~~~~~~~d~~~~s~hK~~~~p-~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~ 333 (429)
..-+.. .+++ ..|.+++ -|.+.++ ..+|.++.+++ . .+.+.....+ ....-..|+.|.+ ....+..++|+
T Consensus 263 G~~~~~~~~gv-~PDivt~--gK~lggG~~Pi~av~~~~~-i-~~~~~~~~~~-~~~~h~~T~~gnp--~~~aaa~a~l~ 334 (451)
T PRK07678 263 GKAFGFMNYGV-KPDIITM--AKGITSAYLPLSATAVKKE-I-YEAFKGKGEY-EHFRHVNTFGGNP--AACALALKNLE 334 (451)
T ss_pred chhHHHHhcCC-CCCEEEe--ecccccCCcceeEEEEcHH-H-HHHHhccCcc-cccccCCCCCcCH--HHHHHHHHHHH
Confidence 100001 1232 3677765 3655555 46777777642 2 1222111000 0000011111222 34445556666
Q ss_pred HcCHHHHHHHHHHHHHHHHHHHHHHHh----CCCeEEeeCCCCceEEEEEecCCCC-C--CHHHHHHHHHHHHhccCcee
Q 014163 334 RLGFEGYKNIMENCMGNARALREGLEK----TGRFEILSKDVGVPLVAFSLKDSSA-H--TVFEISEGLRKKLNRFQVVY 406 (429)
Q Consensus 334 ~l~~~g~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~v~f~~~~~~~-~--~~~~~~~~L~~~l~~~G~~~ 406 (429)
.+.++ ...++..++.++|.+.|++ .+.+.-+ .....++.+.+..+.. . ...+.+..+.+.+.++|+.+
T Consensus 335 ~l~~~---~~~~~~~~~g~~l~~~l~~~~~~~~~v~~v--rg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv~~ 409 (451)
T PRK07678 335 IMENE---NLIERSAQLGELLLEQLKEELGEHPLVGDI--RGKGLLVGIELVNDKETKEPADNDKVASVVAACKEKGLII 409 (451)
T ss_pred HHHhC---CHHHHHHHHHHHHHHHHHHHHhcCCCEEEE--EeeceEEEEEEecCCcccCcCchHHHHHHHHHHHHCCcEE
Confidence 66544 3455666666777666653 3421111 1123445555532110 0 01244555666666999987
Q ss_pred cccCCCCCCCceEEEEEe
Q 014163 407 PQKLPMSYPWSTKLRVIS 424 (429)
Q Consensus 407 ~~~~~~~~~~~~~lRi~~ 424 (429)
....+....+...||++.
T Consensus 410 ~~~g~~v~~~~~~lrl~P 427 (451)
T PRK07678 410 GKNGDTVAGYNNVLTLSP 427 (451)
T ss_pred eecCccccCCCCEEEEEC
Confidence 542222223346689874
No 340
>PRK12403 putative aminotransferase; Provisional
Probab=99.10 E-value=6.8e-08 Score=96.64 Aligned_cols=309 Identities=13% Similarity=0.032 Sum_probs=156.8
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
..+|.+.+++.+.+++-...........+...++.+.|+++++... ....++++|+||+..|++.++..+..
T Consensus 70 h~hp~v~~A~~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGseA~e~AiklAr~~~~~--- 141 (460)
T PRK12403 70 YGRKDLAAAAARQMEQLPYYNMFFHTTHPAVIELSELLFSLLPGHY-----SHAIYTNSGSEANEVLIRTVRRYWQV--- 141 (460)
T ss_pred CCCHHHHHHHHHHHHhCCCeecccccCCHHHHHHHHHHHHhCCCCc-----CEEEEeCCcHHHHHHHHHHHHHHHHh---
Confidence 3468888888887765322111112233444566677888776321 13889999999999999999764211
Q ss_pred hcCCCCCCcEEEE-cCCCchHHHHHHHhcCce-----------eEEEeccCC-----c------cccCHHHHHHHhhh--
Q 014163 147 EQGKPYDKPNIVT-GANVQVCWEKFARYFEVE-----------LKEVKLEEG-----Y------YVMNPVKAVELVDE-- 201 (429)
Q Consensus 147 ~~g~~~~~~~vi~-~~~~h~s~~~~~~~~G~~-----------v~~v~~~~~-----~------~~~d~~~l~~~i~~-- 201 (429)
.|.+ .+..|+. ....|.+...+....|.+ +..+|.... + ...+.++|++.+.+
T Consensus 142 -~g~~-~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~ 219 (460)
T PRK12403 142 -LGKP-QKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELG 219 (460)
T ss_pred -hCCC-CCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhC
Confidence 1110 1234443 344566544444433322 223331100 0 00123556666532
Q ss_pred --CCeEEEEeeCCCccccccC----hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc-ccCCCCeeEEEEc
Q 014163 202 --NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVS 274 (429)
Q Consensus 202 --~~~~v~~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~d~~~~s 274 (429)
+..+|++--....-|.+.| +++|.++|++| |+++|+|+++.++.- ...-+.. .+++. .|.++
T Consensus 220 ~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~------g~lLI~DEV~tGfGR--tG~~~a~e~~gv~-PDiv~-- 288 (460)
T PRK12403 220 AENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQY------DVLLCADEVIGGFGR--TGEWFAHEHFGFE-PDTLS-- 288 (460)
T ss_pred CCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--CchhhhhhhcCCC-CCeEE--
Confidence 3345555544445577766 99999999999 999999999976421 1111111 12332 57776
Q ss_pred CcccCCCCC-CeEEEEEeCCCCccccccccc-CCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHH-HHH
Q 014163 275 GHKYGLVYA-GVGWVVWRTKDDLPDELVFHI-NYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCM-GNA 351 (429)
Q Consensus 275 ~hK~~~~p~-g~g~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~-~~~ 351 (429)
.-|.+.+++ .+|.++++++ +.+.+.... .+..+ .++.+. .....+..++|+.+.++. ..++.. ++.
T Consensus 289 ~gK~lggG~~Piga~v~~~~--i~~~~~~~~~~~~~~----~T~~gn--Pl~~Aaala~L~~i~~~~---l~~~~~~~~g 357 (460)
T PRK12403 289 IAKGLTSGYVPMGGLVLSKR--IAEALVEQGGVFAHG----LTYSGH--PVAAAVAIANLKALRDEG---VVTRVKDDTG 357 (460)
T ss_pred EcccccccccceEEEEECHH--HHHHHhcCCCccccC----CCCCCC--HHHHHHHHHHHHHHHhcc---HHHHHHHHHH
Confidence 347666553 5676666532 212211110 11100 111122 234455566666665543 345554 566
Q ss_pred HHHHHHHHhC-CCeEEeeCC-CCceEEEEEecCCCC-----CCHHHHHHHHHHHHhccCceec
Q 014163 352 RALREGLEKT-GRFEILSKD-VGVPLVAFSLKDSSA-----HTVFEISEGLRKKLNRFQVVYP 407 (429)
Q Consensus 352 ~~l~~~L~~~-~~~~~~~~~-~~~~~v~f~~~~~~~-----~~~~~~~~~L~~~l~~~G~~~~ 407 (429)
++|.+.|+++ ....++..- ....+..+.+..... .....+...+.+++.++|+.+.
T Consensus 358 ~~l~~~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~ 420 (460)
T PRK12403 358 PYLQRCLREVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIR 420 (460)
T ss_pred HHHHHHHHHHHhcCCCEEeEeecceEEEEEEccCccccccccchhHHHHHHHHHHHhCCEEEE
Confidence 6666666542 112222221 123445555532111 1112344455555669998875
No 341
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.10 E-value=1.6e-07 Score=93.71 Aligned_cols=326 Identities=11% Similarity=0.008 Sum_probs=166.9
Q ss_pred CCCCCccccccc----cCCChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchH
Q 014163 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (429)
Q Consensus 53 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~ 128 (429)
+|+.++.+.++. -...+|.+.+++.+.+++....... ....+.+.++.+.|++++..... ....++++|+|
T Consensus 40 dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~ql~~~~~~~~~-~~~~~~~~~lae~L~~~~p~~~~----~~v~f~~SGse 114 (445)
T PRK08593 40 DGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTPA-YMYHEPLVRLAKKLCELAPGDFE----KRVTFGLSGSD 114 (445)
T ss_pred CCCEEEECCccHHhhcCCCCCHHHHHHHHHHHHhccCcccc-ccCCHHHHHHHHHHHHhCCCCCC----CEEEECCchHH
Confidence 455544443332 2235688888888777653221111 01233444666777777643210 13889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcC-CCchHHHHHHHhcCc-------------eeEEEeccCCc----ccc
Q 014163 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGA-NVQVCWEKFARYFEV-------------ELKEVKLEEGY----YVM 190 (429)
Q Consensus 129 a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~-~~h~s~~~~~~~~G~-------------~v~~v~~~~~~----~~~ 190 (429)
|+..|++.++.. . ++..|+.-+ ..|....-+....+. ++..+|..... ...
T Consensus 115 A~e~AiklAr~~-------t----gr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 183 (445)
T PRK08593 115 ANDGIIKFARAY-------T----GRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEP 183 (445)
T ss_pred HHHHHHHHHHHh-------h----CCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCC
Confidence 999999998763 1 134565544 455543333322221 13344432110 001
Q ss_pred C-------HHHHHHHhh-----hCCeEEEEeeCCCccccccC----hHHHHHHHHHhhhccCCCccEEeecccccccccc
Q 014163 191 N-------PVKAVELVD-----ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (429)
Q Consensus 191 d-------~~~l~~~i~-----~~~~~v~~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (429)
+ ++++++.+. +++.+|++--.....|.+.| +++|.++|++| |+++++|+++.++.-
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~------g~llI~DEv~tg~Gr-- 255 (445)
T PRK08593 184 DANFVEEYLAPLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREH------GILFAVDDIQQGLGR-- 255 (445)
T ss_pred cHHHHHHHHHHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc--
Confidence 1 244555443 34556666555556677756 99999999999 999999999965321
Q ss_pred cCCCCc-cccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHH
Q 014163 255 LYPDLE-WDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFI 333 (429)
Q Consensus 255 ~~~~~~-~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~ 333 (429)
....+. ..+++ ..|.+++ -|.+.++..+|+++.+++ . .+.+. ... ..++..+.+ ....+..++++
T Consensus 256 tG~~~a~~~~gv-~pDi~t~--gK~l~~G~p~gav~~~~~-i-~~~~~-~~~------~~~T~~~~p--l~~aaa~a~l~ 321 (445)
T PRK08593 256 TGKWSSISHFNI-TPDLMSF--GKSLAGGMPMSAIVGRKE-I-MESLE-APA------HLFTTGANP--VSCAAALATID 321 (445)
T ss_pred CchHHHHHhcCC-CCCEeee--cccccCCcccEEEEEcHH-H-Hhhhc-cCC------CCCCCCCCH--HHHHHHHHHHH
Confidence 110000 01122 2565543 466655566788777542 2 22221 001 111211222 33444556666
Q ss_pred HcCHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEeeCCC-CceEEEEEecCCC--CCCHHHHHHHHHHHHhccCceeccc
Q 014163 334 RLGFEGYKNIMENCMGNARALREGLEKTG-RFEILSKDV-GVPLVAFSLKDSS--AHTVFEISEGLRKKLNRFQVVYPQK 409 (429)
Q Consensus 334 ~l~~~g~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~-~~~~v~f~~~~~~--~~~~~~~~~~L~~~l~~~G~~~~~~ 409 (429)
.+.++ +..++..++.++|.+.|+++. ...++..-. ....+.+.+.... .....+....+.+++.++|+.+...
T Consensus 322 ~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~ 398 (445)
T PRK08593 322 MIEDE---SLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFEHGVVIIAV 398 (445)
T ss_pred HHHhc---cHHHHHHHHHHHHHHHHHHHHhcCCcEEEEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHHHCCeEEecc
Confidence 65443 456667777777777776531 112222211 2223344443211 1111234455566666999887431
Q ss_pred CCCCCCCceEEEEEec
Q 014163 410 LPMSYPWSTKLRVISH 425 (429)
Q Consensus 410 ~~~~~~~~~~lRi~~~ 425 (429)
+...+|++..
T Consensus 399 ------~~~~lr~~p~ 408 (445)
T PRK08593 399 ------AGNVLRFQPP 408 (445)
T ss_pred ------CCCEEEEECC
Confidence 1245887764
No 342
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.08 E-value=9.2e-08 Score=95.04 Aligned_cols=295 Identities=13% Similarity=-0.004 Sum_probs=157.5
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
..+|.+.+++.+.+......... .+.+.++.+.+.+++.. . ....++++||||+..|++.++.. .
T Consensus 69 h~~p~v~~ai~~q~~~~~~~~~~----~~~~~~la~~l~~~~p~-~-----~~v~f~~sGseA~e~AlklAr~~-t---- 133 (428)
T PRK12389 69 HAHPHITKAITEAAENGVLYGTP----TELEIEFAKMLKEAIPS-L-----EKVRFVNSGTEAVMTTIRVARAY-T---- 133 (428)
T ss_pred CCCHHHHHHHHHHHHhCCccCCC----CHHHHHHHHHHHHhCCC-C-----cEEEEeCCHHHHHHHHHHHHHHh-h----
Confidence 34688888887777653221112 23344666667776531 1 13889999999999999999863 1
Q ss_pred hcCCCCCCcEEEEcC-CCchHHHHHHHhcCceeE--------EEe--ccCCcc---ccCHHHHHHHhhh---CCeEEEEe
Q 014163 147 EQGKPYDKPNIVTGA-NVQVCWEKFARYFEVELK--------EVK--LEEGYY---VMNPVKAVELVDE---NTICVAAI 209 (429)
Q Consensus 147 ~~g~~~~~~~vi~~~-~~h~s~~~~~~~~G~~v~--------~v~--~~~~~~---~~d~~~l~~~i~~---~~~~v~~~ 209 (429)
++..|+.-. ..|....-+....|.... .++ ..++.. .-|++.+++.++. +..+|++-
T Consensus 134 ------gr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaavi~E 207 (428)
T PRK12389 134 ------GRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGDEVAAVLVE 207 (428)
T ss_pred ------CCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCCcEEEEEEe
Confidence 234565544 455543333332221110 000 000000 1278899988863 34555555
Q ss_pred eCCCccccccC----hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCe
Q 014163 210 LGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGV 285 (429)
Q Consensus 210 ~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~ 285 (429)
-.....|.+.| +++|.++|++| |+++++|+++.|+-..+.. ....+++ ..|.+++ -|.+.++..+
T Consensus 208 Pv~g~~G~~~p~~~yl~~l~~lc~~~------g~llI~DEV~tG~Rt~~~~--a~~~~gv-~PDivt~--gK~lggG~Pi 276 (428)
T PRK12389 208 PIVGNFGIVEPKPGFLEAVNELAHEA------GALVIYDEVITAFRFMYGG--AQDLLGV-EPDLTAL--GKIIGGGLPI 276 (428)
T ss_pred CCCCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEEccccccccCcch--hhHHhCC-CCCeeee--chhhcCCCce
Confidence 55555677777 99999999999 9999999999875111000 0011222 3566543 4666665667
Q ss_pred EEEEEeCCCCcccccccc-cCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHh----
Q 014163 286 GWVVWRTKDDLPDELVFH-INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEK---- 360 (429)
Q Consensus 286 g~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~---- 360 (429)
|.++.++ +. .+.+... ..+..+ |+.|.+ ....+..++|+.+.++ +..++..++.++|++.|++
T Consensus 277 ~av~~~~-~i-~~~~~~~~~~~~~~-----T~~gnp--l~~Aaala~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~ 344 (428)
T PRK12389 277 GAYGGRK-DI-MEQVAPLGPAYQAG-----TMAGNP--ASMAAGIACLEVLQQE---GVYEKLDRLGAMLEEGILEAAEK 344 (428)
T ss_pred eEEeEHH-HH-HhhhccCCCccccc-----CCccCH--HHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHh
Confidence 7776653 22 2222110 001111 111222 3444555666666543 3566677778888877775
Q ss_pred CCC-eEEeeCCCCceEEEEEecCCCCCC-------HHHHHHHHHHHHhccCceecc
Q 014163 361 TGR-FEILSKDVGVPLVAFSLKDSSAHT-------VFEISEGLRKKLNRFQVVYPQ 408 (429)
Q Consensus 361 ~~~-~~~~~~~~~~~~v~f~~~~~~~~~-------~~~~~~~L~~~l~~~G~~~~~ 408 (429)
.|- ..+.. ..+++.+.+......+ ..+....+.+++.++|+.+..
T Consensus 345 ~~~~~~v~r---~~g~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~ 397 (428)
T PRK12389 345 HGITITINR---LKGALTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQGINLAP 397 (428)
T ss_pred CCCCEEEEe---cCcEEEEEEeCCCCCChhhhcccCHHHHHHHHHHHHHCCcEeec
Confidence 341 12211 1234444443211100 123445566666699988764
No 343
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.07 E-value=7.9e-08 Score=95.97 Aligned_cols=310 Identities=14% Similarity=0.053 Sum_probs=161.4
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
..+|.+.+++.+.+++-......+ ...+.+.++.+.|+++++... ....++++|+||+..|++.++..
T Consensus 69 h~~p~i~~Ai~~ql~~~~~~~~~~-~~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGsEA~e~AlklAr~~------ 136 (457)
T PRK05639 69 YSHPKLVKAVQEQVALIQHSMIGY-THSERAIRVAEKLAEISPIEN-----PKVLFGLSGSDAVDMAIKVSKFS------ 136 (457)
T ss_pred CCCHHHHHHHHHHHHhccccccCc-cCCHHHHHHHHHHHhhCCCCc-----CEEEEeCchHHHHHHHHHHHHHh------
Confidence 456888888887776522111111 112333456667777765321 13889999999999999999753
Q ss_pred hcCCCCCCcEEEEcCC-CchHHHHHHHhcC--------c-----eeEEEeccCCccc--------cCH--------HHHH
Q 014163 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFE--------V-----ELKEVKLEEGYYV--------MNP--------VKAV 196 (429)
Q Consensus 147 ~~g~~~~~~~vi~~~~-~h~s~~~~~~~~G--------~-----~v~~v~~~~~~~~--------~d~--------~~l~ 196 (429)
. +++.|+.-.. .|.....+....| . ++..+|.... .+ -|. +.++
T Consensus 137 -t----gr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~~le 210 (457)
T PRK05639 137 -T----RRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNP-YRNPWGINGYEEPDELINRFLDYLE 210 (457)
T ss_pred -c----CCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCcc-ccccccccccCCHHHHHHHHHHHHH
Confidence 1 2356665554 5543333322222 1 1334443210 00 022 2455
Q ss_pred HHhh------hCCeEEEEeeCCCccccccC----hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc-ccCC
Q 014163 197 ELVD------ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRL 265 (429)
Q Consensus 197 ~~i~------~~~~~v~~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~ 265 (429)
+.+. ++..+|++--.....|.+.| +++|.++|++| |+++++|+++.|+.- ...-+.. .+++
T Consensus 211 ~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~------g~llI~DEv~tG~Gr--tG~~~a~~~~gv 282 (457)
T PRK05639 211 NYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEH------GILLVMDEVQTGIGR--TGKWFASEWFEV 282 (457)
T ss_pred HHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEechhhccCc--CchHHHHHhcCC
Confidence 5442 23455555444444455432 78999999999 999999999976421 1110011 1222
Q ss_pred CCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHH
Q 014163 266 PLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIME 345 (429)
Q Consensus 266 ~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~ 345 (429)
..|.+++ -|.+.++.++|.++.+++ .. +.. ...+. .+..+.+ ....+..++++.+..+ +..+
T Consensus 283 -~PDiv~~--gK~l~gG~pi~av~~~~~-i~-~~~--~~~~~------~T~~g~p--~~~aaa~a~l~~l~~~---~l~~ 344 (457)
T PRK05639 283 -KPDLIIF--GKGVASGMGLSGVIGRKE-LM-DLT--SGSAL------LTPAANP--VISAAAEATLEIIEEE---NLLK 344 (457)
T ss_pred -CCCEEEe--chhhcCCCcceeEEehHH-HH-hhc--CCCcc------cCCCcCH--HHHHHHHHHHHHHHHc---cHHH
Confidence 3777773 576666677788777543 22 110 00111 1211222 2344455556655443 3456
Q ss_pred HHHHHHHHHHHHHHhC-CCeEEeeCCC-CceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEE
Q 014163 346 NCMGNARALREGLEKT-GRFEILSKDV-GVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVI 423 (429)
Q Consensus 346 ~~~~~~~~l~~~L~~~-~~~~~~~~~~-~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~ 423 (429)
+..++.++|++.|+++ .+..++.... ..-++.+.+..+......++...+.+.+.++|+.+... -.+...+|++
T Consensus 345 ~~~~~g~~l~~~L~~l~~~~~~~~~VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~----g~~~~~lr~~ 420 (457)
T PRK05639 345 NALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVKENGKPDPELTGKICWRAFELGLILPSY----GMFGNVIRIT 420 (457)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCEEeeccceeEEEEEEecCCCCCCHHHHHHHHHHHHhCCeEEeec----CCCCCEEEEe
Confidence 6666777888777763 1122332211 23344555432211112244555666666999987542 1123468886
Q ss_pred e
Q 014163 424 S 424 (429)
Q Consensus 424 ~ 424 (429)
.
T Consensus 421 P 421 (457)
T PRK05639 421 P 421 (457)
T ss_pred C
Confidence 5
No 344
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.07 E-value=2.4e-07 Score=92.79 Aligned_cols=312 Identities=12% Similarity=0.006 Sum_probs=156.1
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
..+|.+.+++.+.+++..... ......+.+.++.+.|.+++..... ....++++||||+..|++.++.. .
T Consensus 70 h~~p~v~~ai~~q~~~~~~~~-~~~~~~~~~~~la~~L~~~~p~~~~----~~v~f~~sGseA~e~AlklAr~~-t---- 139 (451)
T PRK06918 70 HSHPKVKEALHKQVDQYIHTG-FNVMMYEPYIELAEKLAALAPGSFD----KKVLFLNSGAEAVENAVKIARKY-T---- 139 (451)
T ss_pred CCCHHHHHHHHHHHHhccCcc-ccccccHHHHHHHHHHHHhCCCCCC----CEEEEcCCcHHHHHHHHHHHHHH-h----
Confidence 456888888887776532211 1111234445667778887743210 13889999999999999999763 1
Q ss_pred hcCCCCCCcEEEEcCC-CchHHHHHHHhcCc-------------eeEEEeccCC---ccccC--------HHHHHHHhh-
Q 014163 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFEV-------------ELKEVKLEEG---YYVMN--------PVKAVELVD- 200 (429)
Q Consensus 147 ~~g~~~~~~~vi~~~~-~h~s~~~~~~~~G~-------------~v~~v~~~~~---~~~~d--------~~~l~~~i~- 200 (429)
++..|+.-.. .|.....+....|- .+..+|.... ...+. ++.+++.+.
T Consensus 140 ------gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (451)
T PRK06918 140 ------KRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFIS 213 (451)
T ss_pred ------CCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHh
Confidence 2345665444 45433333222221 1233332100 00011 223444432
Q ss_pred ---hCCeEEEEeeCCCcc-ccc----cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc-ccCCCCeeEE
Q 014163 201 ---ENTICVAAILGSTLT-GEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSI 271 (429)
Q Consensus 201 ---~~~~~v~~~~~~~~t-G~~----~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~d~~ 271 (429)
.+..+.++.-|-... |.+ +-+++|.++|++| |+++++|++|.++.. ....+.. .++. ..|.+
T Consensus 214 ~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~------gillI~DEV~tg~gr--~g~~~a~~~~~v-~pDi~ 284 (451)
T PRK06918 214 EVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEH------GILFVADEIQTGFAR--TGKYFAIEHFDV-VPDLI 284 (451)
T ss_pred hcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeccccCcCc--cCceehhHhcCC-CCCEE
Confidence 233444444444433 543 2288999999999 999999999987431 1111110 1121 25544
Q ss_pred EEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Q 014163 272 NVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNA 351 (429)
Q Consensus 272 ~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~ 351 (429)
+ .-|.+.+++++|+++.+++ .. +.+.. ... ..++.+++ ....+..++++.+..+.+ .++..++.
T Consensus 285 t--~sK~l~~G~pig~v~~~~~-i~-~~~~~--~~~-----~~T~~g~~--l~~aaa~a~l~~i~~~~~---~~~~~~~g 348 (451)
T PRK06918 285 T--VSKSLGAGVPISGVIGRKE-IM-DESAP--GEL-----GGTYAGSP--LGCAAALAVLDIIEKENL---NDRAIELG 348 (451)
T ss_pred e--eehhhcCCCccEEEEEcHH-HH-hccCC--CCc-----CcCCCcCH--HHHHHHHHHHHHHHHCCH---HHHHHHHH
Confidence 3 3576777889999987542 21 22110 000 01111121 233334445555534333 34445555
Q ss_pred HHHHHHHHhC----CCeEEeeCCCCceEEEEEec-CC-CCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEec
Q 014163 352 RALREGLEKT----GRFEILSKDVGVPLVAFSLK-DS-SAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 352 ~~l~~~L~~~----~~~~~~~~~~~~~~v~f~~~-~~-~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
+++.+.|+++ +.+.-+. . ...++.+.+. +. ......++...+.+++.++|+.+.+. ... ...+|++..
T Consensus 349 ~~l~~~l~~l~~~~~~~~~vr-g-~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~~~---~~~-~~~lrl~p~ 422 (451)
T PRK06918 349 KVVMNRFEEMKNKYNCIGDVR-G-LGAMCAFELVQDRKTKEPDKTLTANICKEANKRGLLLLSA---GTY-GNVIRVLMP 422 (451)
T ss_pred HHHHHHHHHHHhhCCCceeec-c-ceeEEEEEEccCCCcCCCcHHHHHHHHHHHHHCCeEEeec---CCC-CCEEEEECC
Confidence 6666666543 3221121 2 3445555442 11 01222345666666677999987542 111 246998864
No 345
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=99.04 E-value=7.8e-08 Score=88.46 Aligned_cols=281 Identities=17% Similarity=0.209 Sum_probs=160.5
Q ss_pred CccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchH
Q 014163 87 MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVC 166 (429)
Q Consensus 87 ~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s 166 (429)
|..+.....|. +.+.+.||.+. .+-|..|-.|-...+-.++.. |....+.+.+++++.|+-
T Consensus 75 Yagsrs~~~L~----~avkdifGfq~-------~iPthQGRgAE~Il~~i~ik~--------~~~~pg~~~~~~sN~~Fd 135 (471)
T COG3033 75 YAGSRSYYALA----DAVKDIFGFQY-------TIPTHQGRGAENILIPILIKK--------GEQEPGSKMVAFSNYHFD 135 (471)
T ss_pred hcccccHHHHH----HHHHHhcCcee-------eeeccCCccHHHHHHHHHhhh--------ccccCCccccccccceec
Confidence 33444544444 45778889864 556766655544333333321 111112355666777775
Q ss_pred HHH-HHHhcCceeEEEeccCC---------ccccCHHHHHHHhhh----CCeEEEEeeCCCc-ccc---ccChHHHHHHH
Q 014163 167 WEK-FARYFEVELKEVKLEEG---------YYVMNPVKAVELVDE----NTICVAAILGSTL-TGE---FEDVKLLHDLL 228 (429)
Q Consensus 167 ~~~-~~~~~G~~v~~v~~~~~---------~~~~d~~~l~~~i~~----~~~~v~~~~~~~~-tG~---~~~l~~I~~la 228 (429)
... -.+..|..++.+++++. .|.+|++.|++.|++ +...|+++.-+|. .|. +.+++++.++|
T Consensus 136 TTr~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia 215 (471)
T COG3033 136 TTRGHIQINGATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIA 215 (471)
T ss_pred chhHHHHhcCCccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHH
Confidence 433 34567888877776521 257999999999987 3445554444444 343 48899999999
Q ss_pred HHhhhccCCCccEEeecccccccccccC---CCCc-ccc------CCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCc--
Q 014163 229 TKKNEETGWDTPIHVDAASGGFIAPFLY---PDLE-WDF------RLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDL-- 296 (429)
Q Consensus 229 ~~~~~~~~~~~~l~vD~a~~~~~~~~~~---~~~~-~~~------~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~-- 296 (429)
++| +++++.|+|--.=-.-|.. +..+ +.. ....+|.++.|++|=++.+.| |+++++++..+
T Consensus 216 ~ky------~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnmG-Gfl~~~D~~~fDv 288 (471)
T COG3033 216 KKY------DIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNMG-GFLCFKDDSFFDV 288 (471)
T ss_pred HHc------CCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccceeccc-cEEEecCccHHHH
Confidence 999 9999999976321011111 1111 111 245799999999999888887 78888876431
Q ss_pred ccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHH-cCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceE
Q 014163 297 PDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIR-LGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPL 375 (429)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~-l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~ 375 (429)
...+... .-+..+.+++ |...+..+.++...|.. ... ..+++..+..+||.+.|.+.+ +.++.+. ..+-
T Consensus 289 y~~~~~~-~V~~eG~~tY---Ggl~GrdmealAvGL~e~~~~----~yl~~Rv~Qv~YL~~~l~~~G-Vpi~~pa-GGHa 358 (471)
T COG3033 289 YEECRTL-VVVQEGFPTY---GGLAGRDMEALAVGLREGVNF----DYLAHRVAQVQYLADGLEEAG-VPIVQPA-GGHA 358 (471)
T ss_pred HHHHHhh-eEeecccccc---CcccchhHHHHHHHHHHhcCc----HHHHHHHHHHHHHHHHHHhcC-CeeEecC-CCce
Confidence 1111110 0111112222 34434445555555532 223 344555566779999999987 8777665 3443
Q ss_pred EEEEec------CCCCCCHHHHHHHHHHHHhccCcee
Q 014163 376 VAFSLK------DSSAHTVFEISEGLRKKLNRFQVVY 406 (429)
Q Consensus 376 v~f~~~------~~~~~~~~~~~~~L~~~l~~~G~~~ 406 (429)
+-+... |......+.++-.|.. +.|+..
T Consensus 359 vfvda~~~lphip~eqFpaqala~ely~---e~GiRa 392 (471)
T COG3033 359 VFVDAGKFLPHIPAEQFPAQALACELYK---EAGIRA 392 (471)
T ss_pred EEeehhhhcCCCChhhCcHHHHHHHHHH---HhCeee
Confidence 333321 1122456677777764 556543
No 346
>PRK06062 hypothetical protein; Provisional
Probab=99.04 E-value=2.8e-07 Score=92.00 Aligned_cols=321 Identities=12% Similarity=0.034 Sum_probs=164.6
Q ss_pred CCCCCccccccc----cCCChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchH
Q 014163 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (429)
Q Consensus 53 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~ 128 (429)
+|+.++.+.++. -...+|.+.+++.+.++.-..... ....+.+.++.+.|.++..-.. ....++++|||
T Consensus 51 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~~~~~~~--~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGsE 123 (451)
T PRK06062 51 EGRRYLDFSSQLVNTNIGHQHPKVVAAIQEQAARLCTVAP--AHANDARSEAARLIAERAPGDL-----SKVFFTNGGAD 123 (451)
T ss_pred CCCEEEEcccCHHhhcCCCCCHHHHHHHHHHHHhcCCcCC--ccCCHHHHHHHHHHHHhCCCCC-----CEEEEcCChHH
Confidence 455544433332 224568888888777765322111 1223334466667777763221 13889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCC-CchHHHHHHHhcCc-----------eeEEEeccCCccc------c
Q 014163 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGAN-VQVCWEKFARYFEV-----------ELKEVKLEEGYYV------M 190 (429)
Q Consensus 129 a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~-~h~s~~~~~~~~G~-----------~v~~v~~~~~~~~------~ 190 (429)
|+..|++.++.. . +++.|+.... .|....-+....|. .+..++.... ++ -
T Consensus 124 Ave~AlklAr~~-t----------gr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~ 191 (451)
T PRK06062 124 ANEHAVRMARLH-T----------GRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFL-YRSEFHATT 191 (451)
T ss_pred HHHHHHHHHHHh-h----------CCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCc-cccccCCCC
Confidence 999999999763 1 2355665544 45433333222221 1222322110 11 1
Q ss_pred C-------HHHHHHHhhh----CCeEEEEeeCCCccccccC----hHHHHHHHHHhhhccCCCccEEeeccccccccccc
Q 014163 191 N-------PVKAVELVDE----NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (429)
Q Consensus 191 d-------~~~l~~~i~~----~~~~v~~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (429)
| ++.|+++++. +..+|++--....-|.+.| +++|.++|++| |+++|+|+++.|+.- .
T Consensus 192 ~~~~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~------g~lLI~DEV~tGfGR--t 263 (451)
T PRK06062 192 EEEECERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRH------GIVLIADEVMAGFGR--T 263 (451)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHc------CCEEEeeccccCCCc--C
Confidence 2 6778888853 2345555444445577777 99999999999 999999999987421 1
Q ss_pred CCCCcc-ccCCCCeeEEEEcCcccCCCCC-CeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHH
Q 014163 256 YPDLEW-DFRLPLVKSINVSGHKYGLVYA-GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFI 333 (429)
Q Consensus 256 ~~~~~~-~~~~~~~d~~~~s~hK~~~~p~-g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~ 333 (429)
...+.. .+++ ..|.+++ -|.+.+++ .+|.++.++ +. .+.+. ...+.. ..++.|.+ ....+..++|+
T Consensus 264 G~~~a~~~~gv-~PDi~t~--gK~lggG~~Pigav~~~~-~i-~~~~~-~~~~~~----~~T~~gnp--l~~Aaa~a~L~ 331 (451)
T PRK06062 264 GKWFAIEHFGV-VPDLITF--AKGVNSGYVPLGGVAISE-AI-AATFA-DRPYPG----GLTYSGHP--LACAAAVATIN 331 (451)
T ss_pred cHHHHHHhcCC-CCCeeee--chhhhcCCcCcEEEEEcH-HH-HHHhc-cCCCCC----CCCCCCCH--HHHHHHHHHHH
Confidence 111001 1222 3676654 46665553 566777654 22 22221 111111 11221222 34555666676
Q ss_pred HcCHHHHHHHHHHHHHHH-HHHHHHHHh----CCCeEEeeCCCCceEEEEEecCCC----CCCH----HHHHHHHHHHHh
Q 014163 334 RLGFEGYKNIMENCMGNA-RALREGLEK----TGRFEILSKDVGVPLVAFSLKDSS----AHTV----FEISEGLRKKLN 400 (429)
Q Consensus 334 ~l~~~g~~~~~~~~~~~~-~~l~~~L~~----~~~~~~~~~~~~~~~v~f~~~~~~----~~~~----~~~~~~L~~~l~ 400 (429)
.+..+. ..++..++. ++|.+.|++ .+.+.-+. . ...++.+.+..+. ..+. ......+.+++.
T Consensus 332 ~l~~~~---l~~~~~~~G~~~l~~~L~~l~~~~~~v~~vr-G-~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 406 (451)
T PRK06062 332 AMEEEG---IVENAARIGAEVLGPGLRELAERHPSVGEVR-G-LGVFWALELVADRETREPLAPYGASSAAMAAVKAACK 406 (451)
T ss_pred HHHhcC---HHHHHHHHHHHHHHHHHHHHHhcCCcEEeEe-c-cccEEEEEEcccccccCCCcccchhhHHHHHHHHHHH
Confidence 665543 444455554 355555554 33211111 1 2234455543110 1111 234555666666
Q ss_pred ccCceecccCCCCCCCceEEEEEe
Q 014163 401 RFQVVYPQKLPMSYPWSTKLRVIS 424 (429)
Q Consensus 401 ~~G~~~~~~~~~~~~~~~~lRi~~ 424 (429)
++|+.+.. . ...+|++.
T Consensus 407 ~~Gvl~~~-----~--~~~lrl~p 423 (451)
T PRK06062 407 ERGLLPFV-----N--GNRIHVVP 423 (451)
T ss_pred HCCcEEee-----c--CCEEEEEC
Confidence 99988642 1 13478765
No 347
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.04 E-value=1.7e-07 Score=93.76 Aligned_cols=296 Identities=13% Similarity=0.012 Sum_probs=156.3
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
..+|.+.+++.+.++.... + . ...+.+.++.+.+.+.+.. . ....++++||||+..|++.++..
T Consensus 115 h~~p~v~~av~~ql~~~~~-~-~--~~~~~~~~lAe~l~~~~p~-~-----~~v~f~~SGsEA~e~AlklAR~~------ 178 (474)
T PLN02482 115 HADDEVLAALAETMKKGTS-F-G--APCLLENVLAEMVIDAVPS-V-----EMVRFVNSGTEACMGVLRLARAY------ 178 (474)
T ss_pred CCCHHHHHHHHHHHhhCCC-C-C--CCCHHHHHHHHHHHHhCCC-C-----CEEEEeCChHHHHHHHHHHHHHh------
Confidence 3458888888887765432 1 1 1334566777778887632 1 13889999999999999999763
Q ss_pred hcCCCCCCcEEEEcCC-CchHHHHHHHh--cCce------eEEEecc--CCcc---ccCHHHHHHHhhh---CCeEEEEe
Q 014163 147 EQGKPYDKPNIVTGAN-VQVCWEKFARY--FEVE------LKEVKLE--EGYY---VMNPVKAVELVDE---NTICVAAI 209 (429)
Q Consensus 147 ~~g~~~~~~~vi~~~~-~h~s~~~~~~~--~G~~------v~~v~~~--~~~~---~~d~~~l~~~i~~---~~~~v~~~ 209 (429)
. +++.|+.-.. .|......... .|.. ...+|.. ++.. .-|++.|++.+.. +..+|++-
T Consensus 179 -t----gr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~nd~~~l~~~l~~~~~~iAavI~E 253 (474)
T PLN02482 179 -T----GREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPYNDLEAVKKLFEANKGEIAAVILE 253 (474)
T ss_pred -c----CCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecCCChHHHHHHHHhCCCceEEEEEC
Confidence 1 2356665444 45422111110 0100 0001100 0000 0178899998864 23455554
Q ss_pred eCCCccccccC----hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCC-ccccCCCCeeEEEEcCcccCCCCCC
Q 014163 210 LGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-EWDFRLPLVKSINVSGHKYGLVYAG 284 (429)
Q Consensus 210 ~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~~~~~~~~d~~~~s~hK~~~~p~g 284 (429)
-.....|.+.| +++|.++|++| |+++++|+++.|+-. .... ...+++ ..|.+++ -|.+.++..
T Consensus 254 pv~g~~G~i~p~~~fl~~lr~lc~~~------g~lLI~DEV~tGfR~---g~~ga~~~~gv-~PDi~t~--gK~lggG~P 321 (474)
T PLN02482 254 PVVGNSGFIVPKKEFLEGLREITKEN------GALLVFDEVMTGFRI---AYGGAQEYFGI-TPDLTTL--GKVIGGGLP 321 (474)
T ss_pred CCCCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCeec---CcchHhHHhCC-CCCEEEe--cchhhCCCc
Confidence 44445576655 56899999999 999999999976421 1111 011232 3676554 476666677
Q ss_pred eEEEEEeCCCCcccccccccC-CCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCC-
Q 014163 285 VGWVVWRTKDDLPDELVFHIN-YLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTG- 362 (429)
Q Consensus 285 ~g~l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~- 362 (429)
+|.++.++ +.. +.+..... +..+ ++.+.+ ....+..++|+.+..+ +..++..++.++|++.|+++.
T Consensus 322 igav~g~~-ei~-~~~~~~~~~~~~~-----T~~gnp--l~~aAala~L~~l~~~---~~~~~~~~~g~~l~~~L~~l~~ 389 (474)
T PLN02482 322 VGAYGGRR-EIM-EMVAPAGPMYQAG-----TLSGNP--LAMTAGIHTLKRLQQP---GTYEYLDKITKKLIQGILEAGK 389 (474)
T ss_pred eEEEEEcH-HHH-HhhccCCCccccc-----CcchhH--HHHHHHHHHHHHHhcc---CHHHHHHHHHHHHHHHHHHHHH
Confidence 78876653 222 22211000 1111 111222 2344455566665432 456677777778888777642
Q ss_pred --CeEEeeCCCCceEEEEEecCCCCC-------CHHHHHHHHHHHHhccCceecc
Q 014163 363 --RFEILSKDVGVPLVAFSLKDSSAH-------TVFEISEGLRKKLNRFQVVYPQ 408 (429)
Q Consensus 363 --~~~~~~~~~~~~~v~f~~~~~~~~-------~~~~~~~~L~~~l~~~G~~~~~ 408 (429)
++.++... ..+++.+.+...+.. ...+....+.+.|.++|+.+..
T Consensus 390 ~~g~~~~~~~-v~g~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~Gv~~~~ 443 (474)
T PLN02482 390 KAGHEMCGGY-ISGMFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLEEGVYLAP 443 (474)
T ss_pred hcCCCEEEcc-cceEEEEEEecCCccChhhhccCCHHHHHHHHHHHHHCCeEEec
Confidence 12232211 123444443221100 1123344555666699998765
No 348
>PRK07482 hypothetical protein; Provisional
Probab=99.03 E-value=3.4e-07 Score=91.68 Aligned_cols=336 Identities=13% Similarity=-0.042 Sum_probs=166.4
Q ss_pred CCCCCcccccccc----CCChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchH
Q 014163 53 DGNPRLNLASFVT----TWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (429)
Q Consensus 53 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~ 128 (429)
+|+.++.+.++.. ...+|.+.+++.+.++.............+.+.++.+.|.+++..+. ....++++|||
T Consensus 48 dG~~ylD~~sg~~~~~lGh~~p~v~~Av~~q~~~~~~~~~~~~~~~~~~~~lAe~L~~~~p~~~-----~~v~f~~sGSE 122 (461)
T PRK07482 48 QGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAKELAYYHTYVGHGTEASITLSKRIIDRAPAGM-----SKVYYGLSGSD 122 (461)
T ss_pred CCCEEEEcccchhhhcCCCCCHHHHHHHHHHHHhcCccccccccCCHHHHHHHHHHHHhCCCCc-----CEEEEeCchHH
Confidence 4555444444322 24568888888887765321111111223445567777777763221 13789999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCC-CchHHHHHHHhcC-------c-----eeEEEeccCC-c-------
Q 014163 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGAN-VQVCWEKFARYFE-------V-----ELKEVKLEEG-Y------- 187 (429)
Q Consensus 129 a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~-~h~s~~~~~~~~G-------~-----~v~~v~~~~~-~------- 187 (429)
|+..|++.++..... .|.. ++..|+.-.. .|....-+....| . .+..++.... .
T Consensus 123 Ave~AlKlAr~~~~~----~g~~-~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 197 (461)
T PRK07482 123 ANETQIKLVWYYNNV----LGRP-EKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMS 197 (461)
T ss_pred HHHHHHHHHHHHHHh----cCCC-CCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCC
Confidence 999999999753211 1211 2345665444 4543222222111 1 1223322110 0
Q ss_pred ----cccCHHHHHHHhhh----CCeEEEEeeCCCcccccc----ChHHHHHHHHHhhhccCCCccEEeeccccccccccc
Q 014163 188 ----YVMNPVKAVELVDE----NTICVAAILGSTLTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (429)
Q Consensus 188 ----~~~d~~~l~~~i~~----~~~~v~~~~~~~~tG~~~----~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (429)
..-+++.|++.+.. +..+|++--.....|.+- =+++|.++|++| |+++|+|+++.|+.- .
T Consensus 198 ~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~------giLlI~DEV~tGfGR--t 269 (461)
T PRK07482 198 EEQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKY------DILLIADEVVTGFGR--L 269 (461)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHh------CCEEEEeccccCCCc--C
Confidence 01146788888842 344555544333445552 278999999999 999999999977521 1
Q ss_pred CCCCcc-ccCCCCeeEEEEcCcccCCCCC-CeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHH
Q 014163 256 YPDLEW-DFRLPLVKSINVSGHKYGLVYA-GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFI 333 (429)
Q Consensus 256 ~~~~~~-~~~~~~~d~~~~s~hK~~~~p~-g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~ 333 (429)
...+.. .+++ ..|.+++ -|.+.+++ .+|.++.+++ . .+.+.......+...-..|+.|.+ ....+..++|+
T Consensus 270 G~~~a~~~~gv-~PDiv~~--gKgl~gG~~Pi~av~~~~~-i-~~~~~~~~~~~~~~~h~~T~~gnp--l~~Aaa~a~L~ 342 (461)
T PRK07482 270 GSMFGSDHYGI-EPDLITV--AKGLTSAYAPLSGSIVGEK-V-WDVLEQGSDEHGAIGHGWTYSGHP--ICAAAALANLD 342 (461)
T ss_pred cchhhHHhcCC-CCCEEEE--ccccccCccccceeeecHH-H-HHHHhcccccCCccccCCCCCcCH--HHHHHHHHHHH
Confidence 111111 1122 3677775 37666654 5666666542 2 121111100000000001111222 34445555666
Q ss_pred HcCHHHHHHHHHHHHHHHHHHHHHHHh----CCCeEEeeCCCCceEEEEEecCCC----CCCH-HHHHHHHHHHHhccCc
Q 014163 334 RLGFEGYKNIMENCMGNARALREGLEK----TGRFEILSKDVGVPLVAFSLKDSS----AHTV-FEISEGLRKKLNRFQV 404 (429)
Q Consensus 334 ~l~~~g~~~~~~~~~~~~~~l~~~L~~----~~~~~~~~~~~~~~~v~f~~~~~~----~~~~-~~~~~~L~~~l~~~G~ 404 (429)
.+.+++ ..++..++.++|.+.|++ .+.+.-+ .....++.+.+.... ..+. ..+...+.+++.++|+
T Consensus 343 ~~~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~v~~v--rG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gv 417 (461)
T PRK07482 343 ILEREN---LVGNAAEVGAYFRARLRAAFGDHPLVGEV--RGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAALERGV 417 (461)
T ss_pred HHHhCC---HHHHHHHHHHHHHHHHHHHHhcCCCEEEE--eeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHCCc
Confidence 655443 445566666777777654 3422111 112344555553211 1111 1345566666669998
Q ss_pred eecccCCCCCCCceEEEEE
Q 014163 405 VYPQKLPMSYPWSTKLRVI 423 (429)
Q Consensus 405 ~~~~~~~~~~~~~~~lRi~ 423 (429)
.+... + +...+|++
T Consensus 418 l~~~~-~----~~~~i~~~ 431 (461)
T PRK07482 418 IARAM-P----HGDILGFA 431 (461)
T ss_pred EEecC-C----CCCEEEEe
Confidence 86431 1 12457775
No 349
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.00 E-value=3.3e-07 Score=91.00 Aligned_cols=312 Identities=12% Similarity=0.012 Sum_probs=160.1
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
..+|.+.+++.+.+++-...... ........++.+.++++++.+. ....++++|++|+..+++.++.....+
T Consensus 61 h~~p~v~~ai~~~~~~~~~~~~~-~~~~~~~~~la~~l~~~~~~~~-----~~v~f~~sGseA~e~AlklAr~~~~~~-- 132 (427)
T TIGR00508 61 YNHPRLNAAAQKQIDKMSHVMFG-GFTHKPAIELCQKLVKMTPNAL-----DCVFLADSGSVAVEVALKMALQYWQAK-- 132 (427)
T ss_pred CCCHHHHHHHHHHHHhcCCcccc-ccCCHHHHHHHHHHHhhCCCCC-----CEEEEeCCcHHHHHHHHHHHHHHHHhh--
Confidence 45688888888777653211110 0111223356666777764321 138899999999999999988743211
Q ss_pred hcCCCCCCcEEE-EcCCCchHHHHHHHhcCce-------------eEEEeccCCcc-----ccCHHHHHHHhhh--CCeE
Q 014163 147 EQGKPYDKPNIV-TGANVQVCWEKFARYFEVE-------------LKEVKLEEGYY-----VMNPVKAVELVDE--NTIC 205 (429)
Q Consensus 147 ~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~~-------------v~~v~~~~~~~-----~~d~~~l~~~i~~--~~~~ 205 (429)
|.. ++..|+ +....|....-+....|-. ...+|.....+ .-|++++++.+.. +..+
T Consensus 133 --~~~-~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~~~va 209 (427)
T TIGR00508 133 --GEK-NRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHSDEIA 209 (427)
T ss_pred --CCC-CccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcCCcEE
Confidence 111 123455 4555554333232222211 11222111001 1256778888763 2233
Q ss_pred EEEeeC--CCcccc----ccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc-ccCCCCeeEEEEcCccc
Q 014163 206 VAAILG--STLTGE----FEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHKY 278 (429)
Q Consensus 206 v~~~~~--~~~tG~----~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~d~~~~s~hK~ 278 (429)
.+++-| +..-|. ...+++|.++|++| ++.+++|+++.|+.. ....+.. .+++ ..|.+++ -|.
T Consensus 210 avivEPv~~g~gG~~~~~~~~l~~l~~lc~~~------~~llI~DEv~tG~Gr--~G~~~~~~~~~v-~pDi~~~--gK~ 278 (427)
T TIGR00508 210 AVILEPIVQGAGGMRFYHPTYLKRVQALCKQY------DILLIADEIATGFGR--TGKLFACEHAGV-VPDILCV--GKA 278 (427)
T ss_pred EEEEechhcCcCCcccCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--CCccchhhhcCC-CCCEEEe--chh
Confidence 334444 333332 36799999999999 999999999965321 1111111 1122 3676663 566
Q ss_pred CCCCC-CeEEEEEeCCCCcccccccc--cCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Q 014163 279 GLVYA-GVGWVVWRTKDDLPDELVFH--INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALR 355 (429)
Q Consensus 279 ~~~p~-g~g~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~ 355 (429)
+.++. .++.++.+++ +.+.+... ..+... .++ .+. .....+..++++.+..+ +..++..++.++|.
T Consensus 279 l~gG~~p~~a~~~~~~--~~~~~~~~~~~~~~~~--~T~--~g~--p~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~ 347 (427)
T TIGR00508 279 LTGGYMTLSATVTTDK--VAQTISSGEAGCFMHG--PTF--MGN--PLACAVAEASLAILLEG---EWQKQVSAIENQLK 347 (427)
T ss_pred hhcCcccceEEEEcHH--HHHHHhcCCCCccccC--CCC--CcC--HHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHH
Confidence 55443 4555555432 11221111 011100 111 122 23455566666665443 34677888888999
Q ss_pred HHHHhCCCeEEeeCC-CCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEe
Q 014163 356 EGLEKTGRFEILSKD-VGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVIS 424 (429)
Q Consensus 356 ~~L~~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~ 424 (429)
+.|+++.....+... ....++.+.+.. ..+...+.++|. ++|+.+... . ..+|++.
T Consensus 348 ~~L~~l~~~~~i~~vrg~G~~~~i~~~~--~~~~~~~~~~l~----~~Gv~~~~~-----~--~~l~~~p 404 (427)
T TIGR00508 348 RELSPLRKNPVVKDVRVLGAIGVVEMYK--PVNVEELQKKFV----EQGVWIRPF-----G--KLIYVMP 404 (427)
T ss_pred HHHHHhhcCCCEEeEeccccEEEEEECC--ccCHHHHHHHHH----HCCeEEEec-----C--CEEEEEC
Confidence 988876422112211 124455666543 223455666666 999887532 1 2477765
No 350
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=98.98 E-value=3.8e-07 Score=85.37 Aligned_cols=239 Identities=17% Similarity=0.114 Sum_probs=124.9
Q ss_pred cEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCC--eEEE-EeeCCCccccccCh---HHHHHHH
Q 014163 155 PNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENT--ICVA-AILGSTLTGEFEDV---KLLHDLL 228 (429)
Q Consensus 155 ~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~--~~v~-~~~~~~~tG~~~~l---~~I~~la 228 (429)
...++|.|+|--....++.+|++.+.||..++ ..|+|.+++++.+++ +.+. +=.-+||+|.+-.= ++++.+-
T Consensus 125 vKfLCPvPGYDRHFai~E~~Giemi~VpM~~d--GPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~ 202 (425)
T PF12897_consen 125 VKFLCPVPGYDRHFAITEHFGIEMIPVPMTED--GPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMK 202 (425)
T ss_dssp -EEEEEES--HHHHHHHHHCT-EEEEEEEETT--EE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS-
T ss_pred ceEEecCCCchHHHHHHHhhCcEEEecCCCCC--CCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCC
Confidence 47899999999999999999999999999876 399999999997654 4333 33347899998544 4444441
Q ss_pred -HHhhhccCCCccEEeecccccccccccCCCCc---ccc-------CCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcc
Q 014163 229 -TKKNEETGWDTPIHVDAASGGFIAPFLYPDLE---WDF-------RLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP 297 (429)
Q Consensus 229 -~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~---~~~-------~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~ 297 (429)
... +.-++.|.||+..-+ ..+... .++ +-++--.+..|..|.-+++.|++++..+.. .+.
T Consensus 203 ~AA~------DFRI~WDNAY~vHhL--~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaGva~~aaS~~-Nl~ 273 (425)
T PF12897_consen 203 TAAP------DFRIFWDNAYAVHHL--YDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAGVAFFAASEA-NLA 273 (425)
T ss_dssp -SST------T-EEEEE-TTTT-BS--SSSSS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS-EEEEE-HH-HHH
T ss_pred cCCc------CeEEEeecCceEeec--cccccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcceeeeecCHH-HHH
Confidence 234 899999999985432 121111 111 223333444466777778899998876432 111
Q ss_pred cccccc--cCCCCCCCCCceeccCCchhHHHHHHHHHHHcC-HH-HHHHHHHHHHH--------HHHHHHHHHH-hCCCe
Q 014163 298 DELVFH--INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG-FE-GYKNIMENCMG--------NARALREGLE-KTGRF 364 (429)
Q Consensus 298 ~~~~~~--~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~-~~-g~~~~~~~~~~--------~~~~l~~~L~-~~~~~ 364 (429)
. +... ..-+ +..=+-|..-.++++ .+ |++++++++.+ ..+.|.+.|. ..+ +
T Consensus 274 ~-~~~~~~~~tI--------------gpdKvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~-i 337 (425)
T PF12897_consen 274 W-IKKHLSVQTI--------------GPDKVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLG-I 337 (425)
T ss_dssp H-HHHHHHHH-S-----------------HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGT-S
T ss_pred H-HHHHhcCcee--------------CccHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCC-e
Confidence 0 0000 0111 122334445555664 56 88888877765 3345555665 333 5
Q ss_pred EEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceeccc---CCCC-CCCceEEEEEeccc
Q 014163 365 EILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQK---LPMS-YPWSTKLRVISHLR 427 (429)
Q Consensus 365 ~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~---~~~~-~~~~~~lRi~~~~~ 427 (429)
.-+..|...-+++|...+. .+..+.+... +.|+.+... +|.. -+.-.-|||+-+.+
T Consensus 338 a~Wt~P~GGYFIsld~~~G---~AkrvV~lak----eAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P 397 (425)
T PF12897_consen 338 ASWTKPKGGYFISLDVLDG---TAKRVVELAK----EAGVALTPAGATFPYGKDPRDSNIRIAPSYP 397 (425)
T ss_dssp EEE---SBSS-EEEEESTT----HHHHHHHHH----HTTEE---TTTTSGGG--TTS-EEEE--SSS
T ss_pred eEecCCCCceEEEEecCCC---hHHHHHHHHH----HhCceeCCCCCCCCCCCCCCCCcEEecCCCC
Confidence 5566664667899988653 4455555555 999998663 2211 12234699987654
No 351
>PRK07483 hypothetical protein; Provisional
Probab=98.98 E-value=3.7e-07 Score=90.93 Aligned_cols=308 Identities=11% Similarity=0.017 Sum_probs=152.7
Q ss_pred CChHHHHHHHHHHcCcCCC-CCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYV-DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKR 145 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~ 145 (429)
..+|.+.+++.+.+++-.. .... ...+...++.+.|.+++.-.. ....++++||||+..|++.++.....
T Consensus 46 h~~p~v~~av~~ql~~~~~~~~~~--~~~~~~~~lae~L~~~~p~~~-----~~v~f~~sGsEAve~AlklAr~~~~~-- 116 (443)
T PRK07483 46 HSHPRVIAAIHAQIDRLAYAHTSF--FTTEPAEALADRLVAAAPAGL-----EHVYFVSGGSEAVEAALKLARQYFVE-- 116 (443)
T ss_pred CCCHHHHHHHHHHHHhccCccccc--cCCHHHHHHHHHHHHhCCCCC-----CEEEEcCCcHHHHHHHHHHHHHHHHh--
Confidence 3468888888877765321 1111 112334456667777663211 13889999999999999999864321
Q ss_pred HhcCCCCCCcEEEE-cCCCchHHHHHHHhcCc------------eeEEEeccCCcccc-------------CHHHHHHHh
Q 014163 146 KEQGKPYDKPNIVT-GANVQVCWEKFARYFEV------------ELKEVKLEEGYYVM-------------NPVKAVELV 199 (429)
Q Consensus 146 ~~~g~~~~~~~vi~-~~~~h~s~~~~~~~~G~------------~v~~v~~~~~~~~~-------------d~~~l~~~i 199 (429)
.|.. ++..|+. ....|....-+....|- .+..++.... ++- .++.+++++
T Consensus 117 --~g~~-~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~ 192 (443)
T PRK07483 117 --IGQP-QRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYA-YREQRAGESDEAYGQRLADELEAKI 192 (443)
T ss_pred --cCCC-CCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCcc-ccccccCCCHHHHHHHHHHHHHHHH
Confidence 1211 2345665 44455443222222111 1233332110 110 135677666
Q ss_pred hh----CCeEEEEeeCCC-ccccccC----hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc-ccCCCCee
Q 014163 200 DE----NTICVAAILGST-LTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVK 269 (429)
Q Consensus 200 ~~----~~~~v~~~~~~~-~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~d 269 (429)
.. +..+|++--..- .-|.+.+ +++|.++|++| |+++|+|+++.|+.- ...-+.. .+++ ..|
T Consensus 193 ~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~------gillI~DEV~tGfGR--tG~~~a~~~~gv-~PD 263 (443)
T PRK07483 193 LELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRY------GVLLILDEVMCGMGR--TGTLFACEEDGV-APD 263 (443)
T ss_pred HhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHh------CCEEEEecceeCccc--CcHHHHHhhcCC-CCC
Confidence 42 334444433222 2255533 89999999999 999999999976421 1110111 1122 367
Q ss_pred EEEEcCcccCCCCC-CeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHH
Q 014163 270 SINVSGHKYGLVYA-GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCM 348 (429)
Q Consensus 270 ~~~~s~hK~~~~p~-g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~ 348 (429)
.+++ -|.+.++. .+|.++.+++ . .+.+......... ..|+.|.+ ....+..++|+.+.++ +..++..
T Consensus 264 iv~~--gK~l~gG~~Pi~av~~~~~-i-~~~~~~~~~~~~h---~~T~~gnp--l~~aaa~a~l~~i~~~---~l~~~~~ 331 (443)
T PRK07483 264 LVTI--AKGLGAGYQPIGAVLASDR-I-YDAIADGSGFFQH---GHTYLGHA--TACAAALAVQRVIAED---GLLANVR 331 (443)
T ss_pred eeee--hhhhccCccccEEEEEcHH-H-HHHHhcCCCcccc---CCCCCCCH--HHHHHHHHHHHHHHhc---CHHHHHH
Confidence 7665 36565554 6777777542 2 1221111100000 01111222 3344455556555443 3556666
Q ss_pred HHHHHHHHHHHhC-CCeEEeeCC-CCceEEEEEecCCC----CCC-HHHHHHHHHHHHhccCceecc
Q 014163 349 GNARALREGLEKT-GRFEILSKD-VGVPLVAFSLKDSS----AHT-VFEISEGLRKKLNRFQVVYPQ 408 (429)
Q Consensus 349 ~~~~~l~~~L~~~-~~~~~~~~~-~~~~~v~f~~~~~~----~~~-~~~~~~~L~~~l~~~G~~~~~ 408 (429)
++.++|.+.|+++ ....++... ...-++.+.+.... ..+ ..++...+.+++.++|+.+..
T Consensus 332 ~~g~~l~~~L~~l~~~~~~i~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~ 398 (443)
T PRK07483 332 ARGEQLRARLRERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDPALKLHARIKREAMARGLMVYP 398 (443)
T ss_pred HHHHHHHHHHHHHHhcCCCeeeEeecccEEEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEe
Confidence 7777777777643 112222211 12334455553211 011 123445555666699998754
No 352
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=98.97 E-value=1.1e-06 Score=87.82 Aligned_cols=327 Identities=9% Similarity=0.031 Sum_probs=166.5
Q ss_pred CCCCCcccccccc----CCChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchH
Q 014163 53 DGNPRLNLASFVT----TWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (429)
Q Consensus 53 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~ 128 (429)
+|+.++.+.++.. ...+|.+.+++.+.++....... .....+.+.++.+.|.+++...... .....++++|||
T Consensus 37 dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~~~~~~~-~~~~~~~~~~lae~L~~~~p~~~~~--~~~~f~~~sGsE 113 (442)
T TIGR00709 37 EGKEYLDFLAGAGTLALGHNHPNMKQKILDYLQSGLPLHT-LDLTTPLKDAFIEALLNIIPKRKMD--YKLQFPGPSGAD 113 (442)
T ss_pred CCCEEEEccccHhhhcCCCCCHHHHHHHHHHHHhccCccc-cccCcHHHHHHHHHHHHhCCCcCCC--ccEEEeCCCHHH
Confidence 4555444444322 24568888888877765321111 1122344446667788876432100 011344689999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCC-CchHHHHHHHhcC------------ceeEEEeccCCcccc-----
Q 014163 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGAN-VQVCWEKFARYFE------------VELKEVKLEEGYYVM----- 190 (429)
Q Consensus 129 a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~-~h~s~~~~~~~~G------------~~v~~v~~~~~~~~~----- 190 (429)
|+..|++.++.. . +++.|+.... .|....-+....| ..+..+|.... .+.
T Consensus 114 A~e~AlklAr~~-------t----gr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 181 (442)
T TIGR00709 114 AVEAAIKLAKTY-------T----GRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHE-YRCPFGIG 181 (442)
T ss_pred HHHHHHHHHHHh-------c----CCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCcc-ccccccCC
Confidence 999999999863 1 2355665444 5544333333222 11333443211 111
Q ss_pred ---CH----HHHHHHhh------hCCeEEEEeeCCCccccc----cChHHHHHHHHHhhhccCCCccEEeeccccccccc
Q 014163 191 ---NP----VKAVELVD------ENTICVAAILGSTLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAP 253 (429)
Q Consensus 191 ---d~----~~l~~~i~------~~~~~v~~~~~~~~tG~~----~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~ 253 (429)
+. +.+++.+. ++..+|++.......|.+ +-+++|.++|++| |+++|+|+++.|+.-
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~------g~llI~DEV~tGfGR- 254 (442)
T TIGR00709 182 GEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKH------DIKLILDEVQAGFGR- 254 (442)
T ss_pred chhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeccccCCCC-
Confidence 11 22344443 234556665555555654 3488999999999 999999999977431
Q ss_pred ccCCCCcc-ccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHH
Q 014163 254 FLYPDLEW-DFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (429)
Q Consensus 254 ~~~~~~~~-~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al 332 (429)
...-+.. .+++ ..|.+++ -|.+.+++.+|+++.+++ . ..+. ..... . ++.+.+ ....+..++|
T Consensus 255 -tG~~~a~~~~gv-~PDiv~~--gK~l~~G~Pigav~~~~~--~-~~~~--~~~~~---~--T~~gnp--la~aaa~a~L 318 (442)
T TIGR00709 255 -SGTMFAFEHAGI-EPDFVVM--SKAVGGGLPLAVLLIAPE--F-DAWQ--PAGHT---G--TFRGNQ--LAMVTGTEAL 318 (442)
T ss_pred -CCchhHHHHcCC-CCcEEEE--cccccCCcccEEEEEchH--H-hccC--CCcCC---C--CCCcCH--HHHHHHHHHH
Confidence 1111111 1222 3677773 465555688898887643 2 2111 11110 1 111222 3344455555
Q ss_pred HHcCHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEeeCCC-CceEEEEEecCCCC-------C-CHHHHHHHHHHHHhcc
Q 014163 333 IRLGFEGYKNIMENCMGNARALREGLEKTG-RFEILSKDV-GVPLVAFSLKDSSA-------H-TVFEISEGLRKKLNRF 402 (429)
Q Consensus 333 ~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~-~~~~v~f~~~~~~~-------~-~~~~~~~~L~~~l~~~ 402 (429)
+.+.++ +..++..++.++|.+.|+++- ...++.... ..-++.+.+..... . ...++...+.+++.++
T Consensus 319 ~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (442)
T TIGR00709 319 NYWKDD---NLAQNAQERGERITSFLDDMIKEHPCIGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFEN 395 (442)
T ss_pred HHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHC
Confidence 555443 345566777777777776541 122222211 33455565532110 0 0123556666666699
Q ss_pred CceecccCCCCCCCceEEEEEe
Q 014163 403 QVVYPQKLPMSYPWSTKLRVIS 424 (429)
Q Consensus 403 G~~~~~~~~~~~~~~~~lRi~~ 424 (429)
|+.+... . .+...+|+..
T Consensus 396 Gvl~~~~---~-~~~~~l~~~P 413 (442)
T TIGR00709 396 GLLLETG---G-REGEVFRLLC 413 (442)
T ss_pred CeEEeec---C-CCCCEEEEEC
Confidence 9887531 1 1134577654
No 353
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.96 E-value=2.2e-07 Score=86.31 Aligned_cols=284 Identities=16% Similarity=0.132 Sum_probs=164.8
Q ss_pred ChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeC-CchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCch--H
Q 014163 90 YPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTV-GSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQV--C 166 (429)
Q Consensus 90 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~-g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~--s 166 (429)
++....+-.++.+.+++|+++|.+. .+.+.. |+|....++.+.+... +..-++....+. +
T Consensus 45 sk~~~~v~~~a~~~lreLl~iPd~Y----~VlflqGGat~qf~~~p~nLl~~-------------~~~~yv~~g~Ws~~a 107 (365)
T COG1932 45 SKEFKNVLEEAEKDLRELLNIPDDY----KVLFLQGGATGQFAMAPMNLLGK-------------RGTDYVDTGAWSEFA 107 (365)
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCc----eEEEEcCccHHHHHHHHHhhhcc-------------cCceeEeeeehhHhH
Confidence 3455666668889999999999863 466666 5566666666666542 111033333333 3
Q ss_pred HHHHHHhcCceeE--EEeccC-Cc-cccCHHHHHHHhhhCCeEEEEeeCCCccccccC-hHHHHHHHHHhhhccCCCccE
Q 014163 167 WEKFARYFEVELK--EVKLEE-GY-YVMNPVKAVELVDENTICVAAILGSTLTGEFED-VKLLHDLLTKKNEETGWDTPI 241 (429)
Q Consensus 167 ~~~~~~~~G~~v~--~v~~~~-~~-~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~-l~~I~~la~~~~~~~~~~~~l 241 (429)
...+ +..+-.+. .+...+ +. .-.+++... +.++...|..|+..|.+|+--+ ...+ +++.++
T Consensus 108 ~~eA-~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~~~ayv~~~~NeTi~Gv~v~~~p~~-----------~~~~~~ 173 (365)
T COG1932 108 IKEA-KKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSDNDAYVHFCWNETISGVEVPELPDI-----------GSDGLL 173 (365)
T ss_pred HHHH-HHhcccccccccceeccCccCCCChhhcc--cCCCccEEEEecCCcccceEccCCCCC-----------CCCceE
Confidence 3333 44443222 222111 11 233444333 4444556889999999998643 2221 114789
Q ss_pred EeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCccccccc-c---cCCCCCCCCCceec
Q 014163 242 HVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVF-H---INYLGSDQPTFTLN 317 (429)
Q Consensus 242 ~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~ 317 (429)
++|+....+.. ++.+...|++.++.+|.+ +|.|.+++++|++ .+.+.-.. . -.|....... ++-
T Consensus 174 v~D~SS~ilsr---------~iDvsk~dviyagaQKnl-GpaGltvvIvr~~-~l~r~~~~~~P~if~y~~~~~~~-s~y 241 (365)
T COG1932 174 VADASSAILSR---------PIDVSKYDVIYAGAQKNL-GPAGLTVVIVRPD-LLERAESYTLPSIFDYLTHADNG-SMY 241 (365)
T ss_pred EEecccHHhcC---------CCChhHcceEEEehhhcc-CccceEEEEEcHH-HHhcccccCCchHhhchhhhccC-Ccc
Confidence 99998875332 222347899999999987 6888999998764 33221111 1 1222211111 122
Q ss_pred cCCchhHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHhCCCeEE-eeCCC-CceEEEEEecCCCCCCHHHHHHH
Q 014163 318 FSKGSSQIIAQYYQFIRLG-FEGYKNIMENCMGNARALREGLEKTGRFEI-LSKDV-GVPLVAFSLKDSSAHTVFEISEG 394 (429)
Q Consensus 318 ~tr~~~~~~~~~~al~~l~-~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~-~~~~v~f~~~~~~~~~~~~~~~~ 394 (429)
.|++.+...-.-.+++.+. ..|++++.++..+.++.|.+.+.+.+-+.- +.+.. +...|||.+.+ .++.+.
T Consensus 242 NTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~~~RS~mnV~f~~~~------~~ld~~ 315 (365)
T COG1932 242 NTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYRNLVAKANRSRMNVTFTLVD------AELDKG 315 (365)
T ss_pred CCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCccccccchhhccceeEEEEcCc------HHHHHH
Confidence 5665555544445556553 567999999999999999999998862222 21211 45678898864 355555
Q ss_pred HHHHHhccCceecccCCCCCCCceEEEEEecc
Q 014163 395 LRKKLNRFQVVYPQKLPMSYPWSTKLRVISHL 426 (429)
Q Consensus 395 L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~ 426 (429)
+.+.+.++|.+.... + ... +.+|+++-+
T Consensus 316 fv~eae~~gl~~lkG-h-r~v--gGmRasiyn 343 (365)
T COG1932 316 FVAEAEAAGLIYLKG-H-RSV--GGLRASIYN 343 (365)
T ss_pred HHHHHHHcCCceecc-c-cCC--Cceeeeeec
Confidence 555555888876543 1 112 238999865
No 354
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=98.96 E-value=4.5e-07 Score=90.20 Aligned_cols=287 Identities=13% Similarity=0.052 Sum_probs=135.6
Q ss_pred HHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCC-CCcEEEEcC-CCchHHHHHHHhcCc
Q 014163 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPY-DKPNIVTGA-NVQVCWEKFARYFEV 176 (429)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~-~~~~vi~~~-~~h~s~~~~~~~~G~ 176 (429)
++.+.++++.+.+ .. ....++++||||+..|++.++.......+..|.+. .+.+|+.-. ..|....-+....|-
T Consensus 89 ~l~~~l~~~~~~~-~~---~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~ 164 (431)
T TIGR03251 89 RFVDTFARVLGDP-AL---PHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNT 164 (431)
T ss_pred HHHHHHHHhcCCC-Cc---CEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCC
Confidence 4445566654211 11 13789999999999999999763211001122111 123565544 455433333222221
Q ss_pred e-eE----------EEe-------ccCCcc-------ccCHHHHHHHhh---hCCeEEEEeeCCCccccc----cChHHH
Q 014163 177 E-LK----------EVK-------LEEGYY-------VMNPVKAVELVD---ENTICVAAILGSTLTGEF----EDVKLL 224 (429)
Q Consensus 177 ~-v~----------~v~-------~~~~~~-------~~d~~~l~~~i~---~~~~~v~~~~~~~~tG~~----~~l~~I 224 (429)
. .. .++ .+.+.. .-+++++++.+. +++.+|++.-.....|.+ +.+++|
T Consensus 165 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l 244 (431)
T TIGR03251 165 DPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAM 244 (431)
T ss_pred ccccccCCCCCCCccCCCCcccCCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHH
Confidence 1 00 011 100000 013455666664 345666666555555655 468999
Q ss_pred HHHHHHhhhccCCCccEEeecccccccccccCCCCcc-ccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccc
Q 014163 225 HDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFH 303 (429)
Q Consensus 225 ~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~ 303 (429)
.++|++| |+.+++|+++.|+.. ...-+.. .+++ ..|.++++ |.+ | .+|++. +++ +.......
T Consensus 245 ~~lc~~~------g~llI~DEV~tG~Gr--tG~~~a~~~~gv-~PDi~~~g--K~~--~-~~g~~~-~~~--i~~~~~~~ 307 (431)
T TIGR03251 245 RALCDEH------DALLIFDEVQTGVGL--TGTAWAYQQLGV-QPDIVAFG--KKT--Q-VCGIMA-GRR--VDEVADNV 307 (431)
T ss_pred HHHHHHc------CCEEEEecchhccCc--cchHHHHHhcCC-CCCEEEec--ccC--c-cceEEe-cch--HHHhhhhc
Confidence 9999999 999999999986421 1110011 1122 37777653 332 2 334443 322 10100000
Q ss_pred cCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCC-CeE-EeeCC-CCceEEEEEe
Q 014163 304 INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTG-RFE-ILSKD-VGVPLVAFSL 380 (429)
Q Consensus 304 ~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~-~~~-~~~~~-~~~~~v~f~~ 380 (429)
..+...... ++.+.+ ....+..++++.+..++ ..++..++.++|.+.|+++- ... ++.+. ....++.+.+
T Consensus 308 ~~~~~~~~~--T~~gnp--l~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~ 380 (431)
T TIGR03251 308 FAVPSRLNS--TWGGNL--VDMVRATRILEIIEEER---LVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDL 380 (431)
T ss_pred ccCccccCC--CCCCCH--HHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEe
Confidence 000000011 111222 34455566666665444 33444555555555554421 111 22222 1334556666
Q ss_pred cCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEec
Q 014163 381 KDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISH 425 (429)
Q Consensus 381 ~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~ 425 (429)
.+. +....+.++|.++|+.+... +...+|++..
T Consensus 381 ~~~------~~~~~~~~~l~~~Gvl~~~~------g~~~lr~~P~ 413 (431)
T TIGR03251 381 PST------ADRDEVIRQLYREGVLLLGC------GERSIRFRPP 413 (431)
T ss_pred CCH------HHHHHHHHHHHhCCeEEecC------CCCeEEEECC
Confidence 421 23344444555999987531 2345887654
No 355
>PRK06917 hypothetical protein; Provisional
Probab=98.96 E-value=4.2e-07 Score=90.65 Aligned_cols=340 Identities=10% Similarity=-0.015 Sum_probs=169.2
Q ss_pred CCCCCccccccc----cCCChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchH
Q 014163 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (429)
Q Consensus 53 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~ 128 (429)
+++.++.+.++. -...+|.+.+++.+.++....... +....+.+.++.+.|.+++.... ....++++|||
T Consensus 29 dG~~ylD~~~g~~~~~lGh~hp~v~~Ai~~ql~~~~~~~~-~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~sGsE 102 (447)
T PRK06917 29 NGNKYFDGSSGAVTAGIGHGVKEIADAIKEQAEEVSFVYR-SQFTSEPAEKLAKKLSDLSPGDL-----NWSFFVNSGSE 102 (447)
T ss_pred CCCEEEECchhHHhccCCCCCHHHHHHHHHHHhhCcCccc-cccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCChHH
Confidence 455544433332 224568888888887776322111 11223445567777888764321 23789999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCC-CchHHHHHHHhcCc------------eeEEEeccCC-cc------
Q 014163 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGAN-VQVCWEKFARYFEV------------ELKEVKLEEG-YY------ 188 (429)
Q Consensus 129 a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~-~h~s~~~~~~~~G~------------~v~~v~~~~~-~~------ 188 (429)
|+..|++.++..+..+ |. .++..|+.-.. .|....-+....|. .+..+|.... ..
T Consensus 103 Ave~AlklAr~~~~~r----g~-t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 177 (447)
T PRK06917 103 ANETAMKIAIQHFQER----GI-QGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVY 177 (447)
T ss_pred HHHHHHHHHHHHHHhc----CC-CCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCCh
Confidence 9999999997643211 11 12346665554 44433222222221 1122221110 00
Q ss_pred ----ccCHHHHHHHhhh----CCeEEEEeeCCCccc-cc----cChHHHHHHHHHhhhccCCCccEEeeccccccccccc
Q 014163 189 ----VMNPVKAVELVDE----NTICVAAILGSTLTG-EF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFL 255 (429)
Q Consensus 189 ----~~d~~~l~~~i~~----~~~~v~~~~~~~~tG-~~----~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~ 255 (429)
.-+++.+++.++. +..+|++--.....| .+ +=+++|.++|++| |+++++|+++.|+.- .
T Consensus 178 ~~~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~------g~llI~DEv~tGfGR--t 249 (447)
T PRK06917 178 PTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHY------DILFIADEVMTGLGR--T 249 (447)
T ss_pred HHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHc------CCEEEEechhhCcCc--c
Confidence 0134677777763 234444443233233 33 2278999999999 999999999976421 1
Q ss_pred CCCCcc-ccCCCCeeEEEEcCcccCCCCC-CeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHH
Q 014163 256 YPDLEW-DFRLPLVKSINVSGHKYGLVYA-GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFI 333 (429)
Q Consensus 256 ~~~~~~-~~~~~~~d~~~~s~hK~~~~p~-g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~ 333 (429)
...+.. .+++ ..|.+++ -|.+.++. .+|.++.+++ . .+.+......... ..|+.+.+ ....+..++|+
T Consensus 250 G~~~a~~~~gv-~PDi~~~--gK~l~~G~~Pi~a~~~~~~-i-~~~~~~~~~~~~~---~~T~~gnp--l~~aaa~a~l~ 319 (447)
T PRK06917 250 GAMFAMEHWGV-EPDIMTL--GKGLGAGYTPIAATVVSDR-V-MEPILRGSRSIMS---GHTLSANP--LSAATALAVLE 319 (447)
T ss_pred cchhhHHhcCC-CCCEEEe--eehhccCCcceEEEEEcHH-H-HHHHhccCccccc---ccCCCCCH--HHHHHHHHHHH
Confidence 111100 1222 2566554 46666554 5677776542 2 1221111111000 00111222 34445555666
Q ss_pred HcCHHHHHHHHHHHHHHHHHHHHHHHhCCC-eEEeeCCC-CceEEEEEecCCC----C-CCHHHHHHHHHHHHhccCcee
Q 014163 334 RLGFEGYKNIMENCMGNARALREGLEKTGR-FEILSKDV-GVPLVAFSLKDSS----A-HTVFEISEGLRKKLNRFQVVY 406 (429)
Q Consensus 334 ~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~-~~~~~~~~-~~~~v~f~~~~~~----~-~~~~~~~~~L~~~l~~~G~~~ 406 (429)
.+..+ +..++..++.++|.+.|+++.. ..++.... ...++.+.+..+. . ....++...+.+.+.++|+.+
T Consensus 320 ~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~ 396 (447)
T PRK06917 320 YMEKH---NLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLL 396 (447)
T ss_pred HHHHC---CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEE
Confidence 65443 3556677777777777766421 22222211 2334555553210 0 111245666666677999987
Q ss_pred ccc-CCCCCCCceEEEEEe
Q 014163 407 PQK-LPMSYPWSTKLRVIS 424 (429)
Q Consensus 407 ~~~-~~~~~~~~~~lRi~~ 424 (429)
... ..+.-.+...+|++.
T Consensus 397 ~~~~~~~~g~~~~~i~l~P 415 (447)
T PRK06917 397 YPAVAGQDGKEGDAVIIAP 415 (447)
T ss_pred EecccccCCCCCCEEEEEC
Confidence 542 111112235688764
No 356
>PRK07036 hypothetical protein; Provisional
Probab=98.96 E-value=5.4e-07 Score=90.31 Aligned_cols=309 Identities=12% Similarity=-0.026 Sum_probs=157.0
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
..+|.+.+++.+.++.-...........+.+.++.+.|.+++..+. ....++++||||+..|++.++.....
T Consensus 67 h~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~sGseAve~AlklAr~~~~~--- 138 (466)
T PRK07036 67 YGREEMADAIADQARRLPYYTPFGDMTNAPAAELAAKLAELAPGDL-----NHVFLTTGGSTAVDSALRFVHYYFNV--- 138 (466)
T ss_pred CCCHHHHHHHHHHHHhCcccccccccCCHHHHHHHHHHHHhCCCCc-----CEEEEeCCchHHHHHHHHHHHHHHHh---
Confidence 4568888888777665221111111223344566677777653221 23889999999999999998753211
Q ss_pred hcCCCCCCcEEEEcC-CCchHHHHHHHhcCc------------eeEEEeccCC---cccc--------CHHHHHHHhhh-
Q 014163 147 EQGKPYDKPNIVTGA-NVQVCWEKFARYFEV------------ELKEVKLEEG---YYVM--------NPVKAVELVDE- 201 (429)
Q Consensus 147 ~~g~~~~~~~vi~~~-~~h~s~~~~~~~~G~------------~v~~v~~~~~---~~~~--------d~~~l~~~i~~- 201 (429)
.|. .++..|+.-. ..|....-+....|- .+..+|.... ...+ .++.+++.+..
T Consensus 139 -~g~-t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 216 (466)
T PRK07036 139 -RGR-PAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSL 216 (466)
T ss_pred -cCC-CCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHc
Confidence 111 0134565544 445433222222221 1333432110 0011 13455666642
Q ss_pred ---CCeEEEEeeCCCccccccC----hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc--ccCCCCeeEEE
Q 014163 202 ---NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW--DFRLPLVKSIN 272 (429)
Q Consensus 202 ---~~~~v~~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~--~~~~~~~d~~~ 272 (429)
+..+|++--.....|.+.| +++|.++|++| |+++|+|+++.|+.- ...-+.. .+++ ..|.++
T Consensus 217 ~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~------g~llI~DEV~tGfGR--tG~~~~~~~~~gv-~PDivt 287 (466)
T PRK07036 217 GADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRY------DILYISDEVVTGFGR--LGHFFASEAVFGI-QPDIIT 287 (466)
T ss_pred CCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHc------CCEEEEeechhCCCc--CchhhhhhhhcCC-CCCEEE
Confidence 3455555555445577655 89999999999 999999999976421 1100111 1222 257666
Q ss_pred EcCcccCCCCC-CeEEEEEeCCCCcccccccc---c-CCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHH
Q 014163 273 VSGHKYGLVYA-GVGWVVWRTKDDLPDELVFH---I-NYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENC 347 (429)
Q Consensus 273 ~s~hK~~~~p~-g~g~l~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~ 347 (429)
+ -|.+.+++ .+|.++.+++ . .+.+... . .+..+ .++.|.+ ....+..++|+.+.++ +..++.
T Consensus 288 ~--gK~l~gG~~Pi~av~~~~~-i-~~~~~~~~~~~~~~~~~----~T~~gnp--l~~aaa~a~Le~i~~~---~l~~~~ 354 (466)
T PRK07036 288 F--AKGLTSGYQPLGAVIISER-L-LDVISGPNAKGNVFTHG----FTYSGHP--VACAAALKNIEIMERE---GLCEHV 354 (466)
T ss_pred E--ccccccCccccEEEEEcHH-H-HHHHhcccCcCcccccC----CCCCCCH--HHHHHHHHHHHHHHhC---CHHHHH
Confidence 4 36665553 5677776542 2 1221110 0 01110 1111222 3344455556555433 466677
Q ss_pred HHHHHHHHHHHHhCCCeEEeeCCC-CceEEEEEecCCCC-----CCHHHHHHHHHHHHhccCceec
Q 014163 348 MGNARALREGLEKTGRFEILSKDV-GVPLVAFSLKDSSA-----HTVFEISEGLRKKLNRFQVVYP 407 (429)
Q Consensus 348 ~~~~~~l~~~L~~~~~~~~~~~~~-~~~~v~f~~~~~~~-----~~~~~~~~~L~~~l~~~G~~~~ 407 (429)
.++.++|.+.|+++....++.... ...++.+.+..+.. ....++...+.+++.++|+.+.
T Consensus 355 ~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~ 420 (466)
T PRK07036 355 REVGPYFEERLASLRELPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLVR 420 (466)
T ss_pred HHHHHHHHHHHHHhccCCCEEEEEeeceEEEEEEccCccccCCCCchhHHHHHHHHHHHHCCcEEe
Confidence 778888888886643222222111 23355555532111 0112345566666669998875
No 357
>PRK07046 aminotransferase; Validated
Probab=98.96 E-value=5.7e-07 Score=89.75 Aligned_cols=292 Identities=11% Similarity=-0.003 Sum_probs=153.1
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
..+|.+.+++.+.++..... . ...+.+.++.+.+.++++.+. ..|+++||||+..|++.++..
T Consensus 91 h~~p~i~~Av~~q~~~~~~~--~--~~~~~~~~lAe~l~~~~~~~~-------v~F~nSGtEA~e~AlrlAR~~------ 153 (453)
T PRK07046 91 HSPAPVARALAEQARRGLTT--M--LPSEDAAWVGEELARRFGLPY-------WQVATTATDANRFVLRWARAV------ 153 (453)
T ss_pred CCCHHHHHHHHHHHHhCCCC--C--CCCHHHHHHHHHHHHHhCCCE-------EEEECCHHHHHHHHHHHHHHh------
Confidence 34588888888877654321 1 123556677788888876432 889999999999999999863
Q ss_pred hcCCCCCCcEEEEcCC-CchHHHHHH-Hh-c----------CceeE----EEeccCCccccCHHHHHHHhhhC-CeEEEE
Q 014163 147 EQGKPYDKPNIVTGAN-VQVCWEKFA-RY-F----------EVELK----EVKLEEGYYVMNPVKAVELVDEN-TICVAA 208 (429)
Q Consensus 147 ~~g~~~~~~~vi~~~~-~h~s~~~~~-~~-~----------G~~v~----~v~~~~~~~~~d~~~l~~~i~~~-~~~v~~ 208 (429)
. +++.|+.-.. .|....... .. . |.... .+.+. + -|++.+++.+..+ ..+|++
T Consensus 154 -T----Gr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~-nd~~~l~~~l~~~~vAavi~ 224 (453)
T PRK07046 154 -T----GRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVE---F-NDLAALEAALADGDVAAVLA 224 (453)
T ss_pred -h----CCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeC---C-CCHHHHHHHhCCCCeEEEEE
Confidence 1 2356665444 454321111 10 0 11000 01111 1 2789999988643 445544
Q ss_pred eeCCCccccccC----hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCC
Q 014163 209 ILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG 284 (429)
Q Consensus 209 ~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g 284 (429)
--.....|.+.| ++++.++|++| |+++|+|+++. +-..+-. ....+++ ..|.+++ -|.+.++..
T Consensus 225 EPi~g~~G~~~p~~~fl~~lr~lc~~~------g~llI~DEV~t-fr~g~Gg--~~~~~gv-~PDi~t~--gK~lggG~P 292 (453)
T PRK07046 225 EPAMTNIGMVLPEPGFHEALRELTRRY------GTLLVIDETHT-ISSGPGG--YTRAHGL-EPDFLVV--GKPIAGGVP 292 (453)
T ss_pred CCCCCCCCCcCCCHHHHHHHHHHHHHh------CCEEEEEcccc-CccCCcc--hhHHhCC-Cccceee--hhhhcCCCc
Confidence 433334455543 79999999999 99999999985 1010010 1111222 2676664 476666677
Q ss_pred eEEEEEeCCCCccccccccc-CCCCCCCCCceeccCCc--hhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHh-
Q 014163 285 VGWVVWRTKDDLPDELVFHI-NYLGSDQPTFTLNFSKG--SSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEK- 360 (429)
Q Consensus 285 ~g~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~tr~--~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~- 360 (429)
+|.++.+++ .. +.+.... ....+ .....+|-+ .....+..++|+.+.++ +..++..++.++|++.|++
T Consensus 293 i~av~g~~~-i~-~~~~~~~~~~~~~---~~~~~~T~~gnpl~~aa~~a~L~~l~~~---~~~~~~~~~g~~l~~~L~~l 364 (453)
T PRK07046 293 CAVYGFSAE-LA-ERAQAAKASAPPG---HSGIGTTLSANALAMAAMRATLAEVMTE---AAYAHMLALAARLAAGLRAV 364 (453)
T ss_pred ceeeeehHH-HH-HHHhhccccCCCC---CceeCCCCcccHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHH
Confidence 888776542 21 2211000 00000 001112221 13344455556655432 2455566666666666654
Q ss_pred ---CCC-eEEeeCCCCceEEEEEecCCCCCC--------HHHHHHHHHHHHhccCceec
Q 014163 361 ---TGR-FEILSKDVGVPLVAFSLKDSSAHT--------VFEISEGLRKKLNRFQVVYP 407 (429)
Q Consensus 361 ---~~~-~~~~~~~~~~~~v~f~~~~~~~~~--------~~~~~~~L~~~l~~~G~~~~ 407 (429)
.+- ..+.+. ...+.+.+......+ ..++...+...+.++|+.+.
T Consensus 365 ~~~~~~~~~v~g~---G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~ 420 (453)
T PRK07046 365 IARHGLPWHVTRV---GARVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNRGVLIT 420 (453)
T ss_pred HHhCCCCeEEEEe---CcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCCEEe
Confidence 331 223222 223344432211111 12345556666668998865
No 358
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.96 E-value=3.5e-07 Score=91.31 Aligned_cols=325 Identities=12% Similarity=-0.010 Sum_probs=163.9
Q ss_pred CCCCCcccccccc----CCChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchH
Q 014163 53 DGNPRLNLASFVT----TWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (429)
Q Consensus 53 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~ 128 (429)
+|+.++.+.++.. ...+|.+.+++.+.++....... .....+...++.+.++++++... ....++++|||
T Consensus 52 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~~~~~~~-~~~~~~~~~~lAe~L~~~~p~~~-----~~v~f~~sGse 125 (453)
T PRK06943 52 DGRRYLDAISSWWVNLFGHANPRINAALKDQLDTLEHAML-AGCTHEPAIELAERLAALTGGTL-----GHAFFASDGAS 125 (453)
T ss_pred CCCEEEEcchHHHHhcCCCCCHHHHHHHHHHHHhcCCccc-cccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCCCHH
Confidence 4555554444421 24568888888877765322111 11112334456677777765321 13889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCC-CchHHHHHHHhcCc------------eeEEEeccCCcc-------
Q 014163 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGAN-VQVCWEKFARYFEV------------ELKEVKLEEGYY------- 188 (429)
Q Consensus 129 a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~-~h~s~~~~~~~~G~------------~v~~v~~~~~~~------- 188 (429)
|+..|++.++..+..+ |.. ++..|+.-.. .|....-+....|- .+..+|.....+
T Consensus 126 Ave~AlKlA~~~~~~r----g~~-~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 200 (453)
T PRK06943 126 AVEIALKMSFHAWRNR----GRG-DKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETA 200 (453)
T ss_pred HHHHHHHHHHHHHHHh----CCC-CCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCH
Confidence 9999999997643211 111 2345665444 45433222222221 133343321000
Q ss_pred ----ccCHHHHHHHhhh---CCeEEEEee-CCCccccc----cChHHHHHHHHHhhhccCCCccEEeecccccccccccC
Q 014163 189 ----VMNPVKAVELVDE---NTICVAAIL-GSTLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY 256 (429)
Q Consensus 189 ----~~d~~~l~~~i~~---~~~~v~~~~-~~~~tG~~----~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~ 256 (429)
.-+++.+++.+.. +..+|++-- .....|.+ +=++++.++|++| |+++|+|+++.|+.- ..
T Consensus 201 ~~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~------gillI~DEV~TG~GR--tG 272 (453)
T PRK06943 201 ADVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRY------GVHLIADEIAVGCGR--TG 272 (453)
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHc------CCEEEeechhhCCCC--Cc
Confidence 1135777777753 344554443 13444554 2378999999999 999999999976421 11
Q ss_pred CCCcc-ccCCCCeeEEEEcCcccCCCCC-CeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHH
Q 014163 257 PDLEW-DFRLPLVKSINVSGHKYGLVYA-GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIR 334 (429)
Q Consensus 257 ~~~~~-~~~~~~~d~~~~s~hK~~~~p~-g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~ 334 (429)
.-+.. .+++ ..|.+++ -|.+.+++ .+|.++.+++ . .+.+..... .....-..++.|.+ ....+..++|+.
T Consensus 273 ~~fa~~~~gv-~PDivt~--gKgl~gG~~Pi~av~~~~e-i-~~~~~~~~~-~~~~~~~~T~~gnp--l~~aaa~a~L~~ 344 (453)
T PRK06943 273 TFFACEQAGV-WPDFLCL--SKGISGGYLPLSLVLSRDA-I-FAAFYDDDV-TRGFLHSHSYTGNP--LACRAALATLDL 344 (453)
T ss_pred chhHHHhCCC-CCCeEee--ehhhccCcccceEEEEcHH-H-HHhhcccCc-cCCccCCCCCCCCH--HHHHHHHHHHHH
Confidence 11111 1122 3677776 36665663 6777777643 2 122111000 00000001111222 334445555655
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeC-CCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecc
Q 014163 335 LGFEGYKNIMENCMGNARALREGLEKTGRFEILSK-DVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQ 408 (429)
Q Consensus 335 l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~-~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~ 408 (429)
+.++ +..++..++.++|.+.|+++.....+.. .....++.+.+..+. .....+...+.+++.++|+.+..
T Consensus 345 i~~~---~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gvel~~~~-~~~~~~~~~i~~~~~~~Gll~~~ 415 (453)
T PRK06943 345 FAED---DVLARNARKSARLRAALAPLAAHPQVRHLRQRGTIFAFDVALDG-DAARTFSRRFFEAALERELLLRP 415 (453)
T ss_pred HHhc---CHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccccEEEEEEccCC-CcchHHHHHHHHHHHHCCcEEEe
Confidence 5443 3556667777777777766421111211 112334555554211 11234455666666699998753
No 359
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.94 E-value=9e-10 Score=103.15 Aligned_cols=222 Identities=16% Similarity=0.122 Sum_probs=49.4
Q ss_pred HHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCch------HHHHHHH
Q 014163 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQV------CWEKFAR 172 (429)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~------s~~~~~~ 172 (429)
.+.+.++.++|++. ..++++...|+++++.++... .+|++|...-. -+....+
T Consensus 51 ~v~~ll~~ltgAea-------A~VvNnnaAAv~L~l~~la~~--------------~EvIvsRGelVeiGgsFRip~vm~ 109 (367)
T PF03841_consen 51 HVEELLCELTGAEA-------ALVVNNNAAAVLLALNTLAKG--------------KEVIVSRGELVEIGGSFRIPDVMR 109 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccc-------ccccccccccccccccccccc--------------cccccccccccccccccccccccc
Confidence 44556888999975 678888888888887776431 37887765332 3566777
Q ss_pred hcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCcc--ccc--cChHHHHHHHHHhhhccCCCccEEeecccc
Q 014163 173 YFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLT--GEF--EDVKLLHDLLTKKNEETGWDTPIHVDAASG 248 (429)
Q Consensus 173 ~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~t--G~~--~~l~~I~~la~~~~~~~~~~~~l~vD~a~~ 248 (429)
..|++++.|-+. .+..+++++++|+++|.++.-.|.+|+. |.. -+++++++++|+| ++++++|.+.|
T Consensus 110 ~sGa~lvEVGtt---N~t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~------~lp~i~DlgsG 180 (367)
T PF03841_consen 110 QSGARLVEVGTT---NRTHLSDYEKAITENTAALLKVHTSNFRIQGFTGEVSLEELAELAKEH------GLPVIVDLGSG 180 (367)
T ss_dssp ------------------------------------------------------HHHHHHHHH------T--EEEE-TTH
T ss_pred cccccccccccc---cccccccccccccccccccccccccccccccccccccHHHHHHHHhhc------CCcEEEECCCC
Confidence 889999888764 2467889999999999999999988873 322 3799999999999 99999999887
Q ss_pred cccc--cc-cCCCCc-cccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhH
Q 014163 249 GFIA--PF-LYPDLE-WDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQ 324 (429)
Q Consensus 249 ~~~~--~~-~~~~~~-~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~ 324 (429)
...- ++ +.++.. ...-..++|.++||+.|.+++|. +|+++-|++ ++ +.++.++- ..... -.-..
T Consensus 181 ~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQ-aGiI~Gkk~-lI-~~lk~~pl-~Ralr--------vdK~t 248 (367)
T PF03841_consen 181 LLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQ-AGIIVGKKE-LI-EKLKKHPL-GRALR--------VDKLT 248 (367)
T ss_dssp HHHHHHTT----------CCCCT-SEEEEETTSSSSS-S--EEEEEEHH-HH-HHHHHHHH-TTT-B----------HHH
T ss_pred CCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCC-eEEEEeCHH-HH-HHHhhCCC-cceEe--------eCHHH
Confidence 5321 11 111111 11123579999999999998877 698887653 32 33332211 11100 00134
Q ss_pred HHHHHHHHHHcCH-HH----------HHHHHHHHHHHHHHHHHHHHhCC
Q 014163 325 IIAQYYQFIRLGF-EG----------YKNIMENCMGNARALREGLEKTG 362 (429)
Q Consensus 325 ~~~~~~al~~l~~-~g----------~~~~~~~~~~~~~~l~~~L~~~~ 362 (429)
+.++.++++.+.. +. +....+...++++.|...|....
T Consensus 249 la~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~~~~ 297 (367)
T PF03841_consen 249 LAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLKAAL 297 (367)
T ss_dssp HHHHHHHHHH---------------------------------------
T ss_pred HHHHHHHHHHHHHhhcccccccccccccccccccccccccccccccccc
Confidence 5566667765432 11 22233455556777777776643
No 360
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=98.94 E-value=2.1e-07 Score=92.14 Aligned_cols=311 Identities=10% Similarity=-0.042 Sum_probs=159.4
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
+.+|.+.+++.+.+++-.+... .....+...++.+.|++++..+. ....++++||||+..|++.++.....
T Consensus 59 h~~p~i~~Ai~~q~~~~~~~~~-~~~~~~~~~~la~~L~~~~p~~~-----~~v~f~~SGsEAve~AlklAr~~~~~--- 129 (428)
T PRK07986 59 YNHPQLNAAMKSQIDAMSHVMF-GGITHPPAIELCRKLVAMTPQPL-----ECVFLADSGSVAVEVAMKMALQYWQA--- 129 (428)
T ss_pred CCCHHHHHHHHHHHhhcCCccc-cccCCHHHHHHHHHHHhhCCCCc-----CEEEEeCCcHHHHHHHHHHHHHHHHh---
Confidence 4468888888887765332111 11122334466677777764321 13889999999999999998864211
Q ss_pred hcCCCCCCcEEEEcCC-CchHHHHHHHhcCc-------------eeEEEeccCCc----c-ccCHHHHHHHhhh---CCe
Q 014163 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFEV-------------ELKEVKLEEGY----Y-VMNPVKAVELVDE---NTI 204 (429)
Q Consensus 147 ~~g~~~~~~~vi~~~~-~h~s~~~~~~~~G~-------------~v~~v~~~~~~----~-~~d~~~l~~~i~~---~~~ 204 (429)
.| .++.+|+.-.. .|....-+....|- .+..+|..... + .-|++++++.++. +..
T Consensus 130 -~g--~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~ia 206 (428)
T PRK07986 130 -KG--EPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHRHEIA 206 (428)
T ss_pred -cC--CCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhCCCcEE
Confidence 11 12355665444 45433222222121 12233321110 1 1366788888863 234
Q ss_pred EEEEeeC-CCccccc----cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc-ccCCCCeeEEEEcCccc
Q 014163 205 CVAAILG-STLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHKY 278 (429)
Q Consensus 205 ~v~~~~~-~~~tG~~----~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~d~~~~s~hK~ 278 (429)
+|++--. ....|.+ ..+++|.++|++| |+++++|+++.|+.- ...-+.. .+++ ..|.+++ -|.
T Consensus 207 avi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~------g~lLI~DEv~tG~Gr--tG~~fa~~~~gv-~PDi~t~--gK~ 275 (428)
T PRK07986 207 AVILEPIVQGAGGMRIYHPEWLKRVRKLCDRE------GILLIADEIATGFGR--TGKLFACEHAGI-APDILCL--GKA 275 (428)
T ss_pred EEEEechhcCcCCcccCCHHHHHHHHHHHHHc------CCEEEEeccccCCcc--CCCeeeecccCC-CCCEEEe--chh
Confidence 4444331 3333432 3489999999999 999999999966321 1111111 1122 2576653 465
Q ss_pred CCCC-CCeEEEEEeCCCCccccccccc-CCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH
Q 014163 279 GLVY-AGVGWVVWRTKDDLPDELVFHI-NYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALRE 356 (429)
Q Consensus 279 ~~~p-~g~g~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~ 356 (429)
+.++ ..+|.++.+++ +.+.+.... ..... ..++.+. .....+..++|+.+.++ +..++..++.++|.+
T Consensus 276 l~gG~~p~~av~~~~~--i~~~~~~~~~~~~~~---~~T~~g~--p~~~aaa~a~L~~i~~~---~~~~~~~~~g~~l~~ 345 (428)
T PRK07986 276 LTGGTMTLSATLTTRE--VAETISNGEAGCFMH---GPTFMGN--PLACAVANASLSLLESG---DWQQQVAAIEAQLRE 345 (428)
T ss_pred hhCCcccCcchhchHH--HHHHhhcCCCCcccc---CCCCCcC--HHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHH
Confidence 5444 34555555432 212221100 00000 0111122 23445555666666444 346777788888888
Q ss_pred HHHhCCCeEEeeCC-CCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEE
Q 014163 357 GLEKTGRFEILSKD-VGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVI 423 (429)
Q Consensus 357 ~L~~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~ 423 (429)
.|+++.....+.+- ....+..+.+..+ .....+.+.|. ++|+.+... + ..+|++
T Consensus 346 ~l~~l~~~~~i~~vRg~Gl~~~ve~~~~--~~~~~~~~~l~----~~Gl~~~~~------g-~~i~~~ 400 (428)
T PRK07986 346 ELAPLRDAPMVADVRVLGAIGVVETTRP--VNMAALQRFFV----EQGVWIRPF------G-KLIYLM 400 (428)
T ss_pred HHHHHhcCCCEEeEeccceEEEEEeCCc--ccHHHHHHHHH----HCCcEEEec------C-CEEEEe
Confidence 88765222222211 1234555555432 23344555555 999987542 1 357775
No 361
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=98.91 E-value=8e-07 Score=88.11 Aligned_cols=296 Identities=10% Similarity=-0.050 Sum_probs=152.8
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
..+|.+.+++.+.++.... + . ...+.+.++.+.+.++++... ....++++|+||+..|++.++..
T Consensus 69 h~~p~v~~ai~~q~~~~~~-~-~--~~~~~~~~la~~L~~~~~~~~-----~~v~f~~SGsEA~e~AiklAr~~------ 133 (433)
T PRK00615 69 HSHPKICDAIQQGAERGTS-Y-G--LTSEQEILFAEELFSYLGLED-----HKIRFVSSGTEATMTAVRLARGI------ 133 (433)
T ss_pred CCCHHHHHHHHHHHHhCCC-C-C--CCCHHHHHHHHHHHHhCCCCc-----CEEEEeCchHHHHHHHHHHHHHh------
Confidence 3468888888777765321 1 1 122334566677777775321 13889999999999999998763
Q ss_pred hcCCCCCCcEEEEcC-CCchHH---HHHHHhcCce---e-EEE--e-ccCCcc---ccCHHHHHHHhhh---CCeEEEEe
Q 014163 147 EQGKPYDKPNIVTGA-NVQVCW---EKFARYFEVE---L-KEV--K-LEEGYY---VMNPVKAVELVDE---NTICVAAI 209 (429)
Q Consensus 147 ~~g~~~~~~~vi~~~-~~h~s~---~~~~~~~G~~---v-~~v--~-~~~~~~---~~d~~~l~~~i~~---~~~~v~~~ 209 (429)
. ++..|+.-. ..|... ..+....+-. . ... + ...... .-|++++++.+.. +..+|++-
T Consensus 134 -t----gr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~E 208 (433)
T PRK00615 134 -T----GRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFE 208 (433)
T ss_pred -h----CCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEEC
Confidence 1 234566544 344422 1111111100 0 000 0 000000 1268889988864 23455554
Q ss_pred eCCCccccccC----hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCc-cccCCCCeeEEEEcCcccCCCCCC
Q 014163 210 LGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLE-WDFRLPLVKSINVSGHKYGLVYAG 284 (429)
Q Consensus 210 ~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~-~~~~~~~~d~~~~s~hK~~~~p~g 284 (429)
-.....|.+.| +++|.++|++| |+++++|+++.|+- ...... ..+++ ..|.+++ -|.+.++..
T Consensus 209 pv~~~~G~~~p~~~yl~~l~~lc~~~------g~llI~DEv~tG~R---~G~~ga~~~~gv-~PDi~~~--gK~lggG~p 276 (433)
T PRK00615 209 PICANMGVVLPKPGFIEGIIQTCRRT------GSLSIMDEVVTGFR---VAQGGAAAIYHV-KPDITVY--GKILGGGLP 276 (433)
T ss_pred CCCCCCCcccCCHHHHHHHHHHHHHc------CCEEEEEccccccc---ccHhHHHHhcCC-CCCeEEE--cccccCCcc
Confidence 44445577655 45999999999 99999999996531 111000 01222 3566653 466655555
Q ss_pred eEEEEEeCCCCcccccccc-cCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHh---
Q 014163 285 VGWVVWRTKDDLPDELVFH-INYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEK--- 360 (429)
Q Consensus 285 ~g~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~--- 360 (429)
+|.++.+++ . .+.+... ..+..+ ++.+.+ ....+..++|+.+.++. ..++..++.++|.+.|++
T Consensus 277 ~~av~~~~~-i-~~~~~~~~~~~~~~-----T~~g~p--~~~aa~la~L~~i~~~~---~~~~~~~~g~~l~~~l~~~~~ 344 (433)
T PRK00615 277 AAAVVAHKS-I-MDHLAPEGTIFQAG-----TLSGNP--LAMAAGKASINLCREQG---FYTQLSTLEQNFLSPIEEMIR 344 (433)
T ss_pred eeeeeecHH-H-HhhhcCCCCcccCC-----CCcccH--HHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHH
Confidence 677776542 2 1222110 001111 111122 34555666666665433 455666666666555544
Q ss_pred -CCCeEEeeCCCCceEEEEEecCCCC-------CCHHHHHHHHHHHHhccCceecc
Q 014163 361 -TGRFEILSKDVGVPLVAFSLKDSSA-------HTVFEISEGLRKKLNRFQVVYPQ 408 (429)
Q Consensus 361 -~~~~~~~~~~~~~~~v~f~~~~~~~-------~~~~~~~~~L~~~l~~~G~~~~~ 408 (429)
.+ +.+.... ...++.+.+..... ....++...+.+.|.++|+.+..
T Consensus 345 ~~g-~~v~~~r-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~ 398 (433)
T PRK00615 345 SQG-FPVSLVR-YGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSKGVYLSP 398 (433)
T ss_pred HcC-CCeEEEe-eceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHCCeeecC
Confidence 22 3222111 23344555532110 11234455666667799988754
No 362
>PRK07481 hypothetical protein; Provisional
Probab=98.91 E-value=2.2e-06 Score=85.68 Aligned_cols=315 Identities=11% Similarity=0.030 Sum_probs=154.8
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
..+|.+.+++.+.+.+............+.+.++.+.|.++++-+. . ....++++||||+..|++.++.....
T Consensus 58 h~~p~v~~Ai~~ql~~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~-~---~~v~f~~sGsEAve~AlklAr~~~~~--- 130 (449)
T PRK07481 58 HNREEVKEAIVRQLDELEYYSTFDGTTHPRAIELSYELIDMFAPEG-M---RRVFFSSGGSDSVETALKLARQYWKV--- 130 (449)
T ss_pred CCCHHHHHHHHHHHHhccceecccccCCHHHHHHHHHHHHhcCCCC-C---CEEEEcCchHHHHHHHHHHHHHHHHh---
Confidence 3468888888777765322111001122344466677777764211 1 13789999999999999999864311
Q ss_pred hcCCCCCCcEEEEcCC-CchHHHHHHHhcC------------ceeEEEeccCC---ccc-cCHHH--------HHHHhh-
Q 014163 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFE------------VELKEVKLEEG---YYV-MNPVK--------AVELVD- 200 (429)
Q Consensus 147 ~~g~~~~~~~vi~~~~-~h~s~~~~~~~~G------------~~v~~v~~~~~---~~~-~d~~~--------l~~~i~- 200 (429)
.|.. ++..|+.-.. .|....-+....| -++..++.... .+. -|++. +++.|.
T Consensus 131 -~g~~-~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~ 208 (449)
T PRK07481 131 -RGQP-ERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAF 208 (449)
T ss_pred -cCCC-CCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHh
Confidence 1211 2345655444 4543322222111 11233332110 011 13333 344443
Q ss_pred ---hCCeEEEEeeCCCccccccC----hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc-ccCCCCeeEEE
Q 014163 201 ---ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSIN 272 (429)
Q Consensus 201 ---~~~~~v~~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~d~~~ 272 (429)
++..+|++--.....|.+-+ ++++.++|++| |+++|+|+++.|+.- ...-+.. .+++ ..|.++
T Consensus 209 ~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~------g~llI~DEV~tGfGR--tG~~~a~~~~gv-~PDiv~ 279 (449)
T PRK07481 209 QGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRH------GILLIADEVVTGFGR--TGSWFGSRGWGV-KPDIMC 279 (449)
T ss_pred cCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHc------CCEEEEeehhhCcCc--CchhhHhhhcCC-CCCEEE
Confidence 23455555544445566543 89999999999 999999999976421 1100000 1122 267766
Q ss_pred EcCcccCCCCC-CeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Q 014163 273 VSGHKYGLVYA-GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNA 351 (429)
Q Consensus 273 ~s~hK~~~~p~-g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~ 351 (429)
+ -|.+.+++ .+|.++++++ . .+.+...........-..++.|.+ ....+..++|+.+.++ +..++..++.
T Consensus 280 ~--gKgl~gG~~Pi~av~~~~~-i-~~~~~~~~~~~~~~~h~~T~~gnp--l~~aaa~a~L~~l~~~---~l~~~~~~~g 350 (449)
T PRK07481 280 L--AKGITSGYVPLGATMVNAR-I-ADAFEANADFGGAIMHGYTYSGHP--VACAAALATLDIVVRE---DLPANAAKRG 350 (449)
T ss_pred E--eecccCCCcCceEEEEcHH-H-HHHHhccCccccccccCCCCCCCH--HHHHHHHHHHHHHHhh---hHHHHHHHHH
Confidence 5 36665553 5677777642 2 122111100000000001111222 2344455556555443 4556666777
Q ss_pred HHHHHHHHhCC-CeEEeeCCC-CceEEEEEecCCC----CCC-HHHHHHHHHHHHhccCceecc
Q 014163 352 RALREGLEKTG-RFEILSKDV-GVPLVAFSLKDSS----AHT-VFEISEGLRKKLNRFQVVYPQ 408 (429)
Q Consensus 352 ~~l~~~L~~~~-~~~~~~~~~-~~~~v~f~~~~~~----~~~-~~~~~~~L~~~l~~~G~~~~~ 408 (429)
++|.+.|+++- ...++.... ...++.+.+..+. ..+ ..++...+.+++.++|+.+..
T Consensus 351 ~~l~~~L~~l~~~~~~i~~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~ 414 (449)
T PRK07481 351 AYLLEGLQPLKERFELVGDVRGKGLMLALDLVADKATREPIDPSKGYANAVADVARENGVLVRP 414 (449)
T ss_pred HHHHHHHHHHhhcCCCeEEEeecceEEEEEecccccccCCCCchhHHHHHHHHHHHhCCeEEEe
Confidence 77777776542 122222211 2334455553211 011 134556666666799988753
No 363
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.91 E-value=4.8e-07 Score=90.62 Aligned_cols=325 Identities=13% Similarity=0.003 Sum_probs=163.4
Q ss_pred CCCCCcccccccc----CCChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchH
Q 014163 53 DGNPRLNLASFVT----TWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (429)
Q Consensus 53 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~ 128 (429)
+|+.++.+.++.. ...+|.+.+++.+.+++-..... .....+.+.++.+.|++++.... ....++++|||
T Consensus 54 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~-~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGse 127 (460)
T PRK06916 54 NGNEYYDGVSSIWLNVHGHQVPELDEAIREQLNKIAHSTL-LGLANVPSILLAEKLIEVVPEGL-----KKVFYSDSGAT 127 (460)
T ss_pred CCCEEEEcchhHHHhhcCCCCHHHHHHHHHHHHhCCCccc-cccCCHHHHHHHHHHHHhCCCCC-----CEEEEeCCcHH
Confidence 4555544443322 24568888888877765221111 11122334466677877764321 13889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcC-CCchHHHHHHHhcCc------------eeEEEeccCC-------c-
Q 014163 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGA-NVQVCWEKFARYFEV------------ELKEVKLEEG-------Y- 187 (429)
Q Consensus 129 a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~-~~h~s~~~~~~~~G~------------~v~~v~~~~~-------~- 187 (429)
|+..|++.++..... .|.. ++..|+.-. ..|....-+....|- .+..+|.... +
T Consensus 128 Ave~AlklAr~~~~~----~g~t-gr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~ 202 (460)
T PRK06916 128 AVEIAIKMAFQYWQN----KGKP-KKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDK 202 (460)
T ss_pred HHHHHHHHHHHHHHh----cCCC-CCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCCh
Confidence 999999999863211 1111 234555544 455544333333221 1233432100 0
Q ss_pred ---cccCHHHHHHHhhh---CCeEEEEee-CCCccccc----cChHHHHHHHHHhhhccCCCccEEeecccccccccccC
Q 014163 188 ---YVMNPVKAVELVDE---NTICVAAIL-GSTLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY 256 (429)
Q Consensus 188 ---~~~d~~~l~~~i~~---~~~~v~~~~-~~~~tG~~----~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~ 256 (429)
..-+++.+++.++. +..+|++-- .....|.+ +=++++.++|++| |+++++|+++.|+.- ..
T Consensus 203 ~~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~------g~llI~DEV~TG~GR--tG 274 (460)
T PRK06916 203 AEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKY------NVLFITDEVATGFGR--TG 274 (460)
T ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHc------CCEEEeechhhCCCc--Cc
Confidence 01245677777763 334444433 23444544 2378999999999 999999999866421 11
Q ss_pred CCCcc-ccCCCCeeEEEEcCcccCCCCC-CeEEEEEeCCCCcccccccccCCC--CCCCCCceeccCCchhHHHHHHHHH
Q 014163 257 PDLEW-DFRLPLVKSINVSGHKYGLVYA-GVGWVVWRTKDDLPDELVFHINYL--GSDQPTFTLNFSKGSSQIIAQYYQF 332 (429)
Q Consensus 257 ~~~~~-~~~~~~~d~~~~s~hK~~~~p~-g~g~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~tr~~~~~~~~~~al 332 (429)
.-+.. .+++ ..|.+++ -|.+.+++ .+|.++.+++ .. +.+. ..+. ....-..++.|. .....+..++|
T Consensus 275 ~~~a~~~~gv-~PDiv~~--gK~l~gG~~Pi~av~~~~e-i~-~~~~--~~~~~~~~~~~~~T~~gn--pl~~aaa~a~l 345 (460)
T PRK06916 275 KMFACEHENV-TPDIMTA--GKGLTGGYLPIAITVTTDE-IY-NAFY--GDYEEQKTFFHGHSYTGN--PLGCAVALANL 345 (460)
T ss_pred hhhHHHhcCC-CCCeeee--ehhhhcCccccceeeecHH-HH-HHhh--ccccccCccccCCCCCCC--HHHHHHHHHHH
Confidence 11011 1122 3676654 36555553 6777776542 21 2111 1110 000001111121 13344455556
Q ss_pred HHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC-CceEEEEEecCCCC-----CCHHHHHHHHHHHHhccCcee
Q 014163 333 IRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV-GVPLVAFSLKDSSA-----HTVFEISEGLRKKLNRFQVVY 406 (429)
Q Consensus 333 ~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~-~~~~v~f~~~~~~~-----~~~~~~~~~L~~~l~~~G~~~ 406 (429)
+.+.++ ...++..++.++|.+.|+++.....+.+.. ...++.+.+..+.. .....+...+.+++.++|+.+
T Consensus 346 ~~l~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~ 422 (460)
T PRK06916 346 ELYEKT---NLIEQVARKTEYVATQLEDLFALKHVGDIRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKRSRELGMLT 422 (460)
T ss_pred HHHHhc---cHHHHHHHHHHHHHHHHHHhhcCCCeEEeecCCceeeEEeecccccccCCCchhhHHHHHHHHHHHCCeEE
Confidence 555443 355677788888888887753222222211 22344454432111 011223445556666999887
Q ss_pred cc
Q 014163 407 PQ 408 (429)
Q Consensus 407 ~~ 408 (429)
..
T Consensus 423 ~~ 424 (460)
T PRK06916 423 RP 424 (460)
T ss_pred Ee
Confidence 53
No 364
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=98.90 E-value=6.6e-08 Score=92.07 Aligned_cols=198 Identities=13% Similarity=0.180 Sum_probs=140.2
Q ss_pred CCcEEEEcCCCchHH-HHHHHhcCceeEEEec--c-CC---ccccCHHHHHHHhhhC------CeEEEEeeCCCcccccc
Q 014163 153 DKPNIVTGANVQVCW-EKFARYFEVELKEVKL--E-EG---YYVMNPVKAVELVDEN------TICVAAILGSTLTGEFE 219 (429)
Q Consensus 153 ~~~~vi~~~~~h~s~-~~~~~~~G~~v~~v~~--~-~~---~~~~d~~~l~~~i~~~------~~~v~~~~~~~~tG~~~ 219 (429)
..|.+|+++..|.-. ..+|+.+|+....|.+ + +. .++||...+++.|+++ |.+++...|++..|..|
T Consensus 230 aaPt~YiS~alh~~l~hYaarefGIa~~aI~~~~dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~GqnD 309 (838)
T KOG0630|consen 230 AAPTFYISEALHMDLLHYAAREFGIADEAIKPILDHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQND 309 (838)
T ss_pred cCceEEEcccccHHHHHHHHHHhCCchhheecccccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchH
Confidence 357999999999864 4568889987544432 2 11 2589999999999863 56778889999999999
Q ss_pred ChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcccc--CCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcc
Q 014163 220 DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF--RLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLP 297 (429)
Q Consensus 220 ~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~--~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~ 297 (429)
.+-+|.++|+++. ..|+|.-|-- +..+.+.++.... -.+.+|+++.+.--|++.|.---+++.|.-+-
T Consensus 310 mi~kildi~eaha-----kfWLHasGha---iAALt~aepnnil~HV~eqldSMal~ialWLGiPSaPiV~LHRPleg-- 379 (838)
T KOG0630|consen 310 MILKILDICEAHA-----KFWLHASGHA---IAALTCAEPNNILGHVEEQLDSMALNIALWLGIPSAPIVLLHRPLEG-- 379 (838)
T ss_pred HHHHHHHHHHHhh-----heeEeeccch---hhheeecCcccchhHHHHHHhhccchhHHHhCCCCCceEEeeccccc--
Confidence 9999999999993 4999976632 2222333322111 12458999999999999887655555443111
Q ss_pred cccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCC
Q 014163 298 DELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKD 370 (429)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~ 370 (429)
.... .|-. .+. .++ -...+.+|.++++++...+.++++....+++.+.+.+.+++++++++..
T Consensus 380 ~aaS---afes--dpi----~re-kLdaLp~Wta~q~LggKaIadmienAFll~kilfe~aSa~~eiemig~d 442 (838)
T KOG0630|consen 380 SAAS---AFES--DPI----LRE-KLDALPLWTALQALGGKAIADMIENAFLLCKILFEGASACEEIEMIGHD 442 (838)
T ss_pred ccch---hccc--ChH----HHH-hhccchHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhcCCceeEeccC
Confidence 0000 0000 000 111 2467889999999999999999999999999999999999999988743
No 365
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.89 E-value=1e-06 Score=87.26 Aligned_cols=314 Identities=11% Similarity=-0.055 Sum_probs=157.4
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
..+|.+.+++.+.+++-...... ....+...++.+.++++.+... ....++++||||+..|++.++.....
T Consensus 56 h~~p~i~~ai~~q~~~~~~~~~~-~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGseA~e~AlklAr~~~~~--- 126 (422)
T PRK05630 56 HGHPRLKAAAHKQIDTMSHVMFG-GLTHEPAIKLTRKLLNLTDNGL-----DHVFYSDSGSVSVEVAIKMALQYSKG--- 126 (422)
T ss_pred CCCHHHHHHHHHHHHhCCCcccC-CcCCHHHHHHHHHHHhhCCCCc-----CEEEEeCCcHHHHHHHHHHHHHHHHh---
Confidence 34688888888777653221110 0112233456666777653221 13889999999999999998764221
Q ss_pred hcCCCCCCcEEEE-cCCCchHHHHHHHhcCc-------------eeEEEeccCCccccC-------HHHHHHHhhhCCeE
Q 014163 147 EQGKPYDKPNIVT-GANVQVCWEKFARYFEV-------------ELKEVKLEEGYYVMN-------PVKAVELVDENTIC 205 (429)
Q Consensus 147 ~~g~~~~~~~vi~-~~~~h~s~~~~~~~~G~-------------~v~~v~~~~~~~~~d-------~~~l~~~i~~~~~~ 205 (429)
.|.+ ++.+|+. ....|....-+....+- ....+|.... ...+ .+.+++.+.++..+
T Consensus 127 -~g~~-~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~~~~~~~~~~~~~iAA 203 (422)
T PRK05630 127 -QGHP-ERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPV-RGSSPQEISEYLRSLELLIDETVAA 203 (422)
T ss_pred -cCCC-CCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcc-cCCChHHHHHHHHHHHHHHhhceEE
Confidence 1111 2345655 44455433333222221 1233433211 0111 34556666555556
Q ss_pred EEEeeC-CCccccc----cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc-ccCCCCeeEEEEcCcccC
Q 014163 206 VAAILG-STLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHKYG 279 (429)
Q Consensus 206 v~~~~~-~~~tG~~----~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~d~~~~s~hK~~ 279 (429)
|++.-. ....|.+ +.+++|.++|++| |+++++|+++.|+.- ...-+.. .+++ ..|.+++ -|.+
T Consensus 204 vi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~------g~llI~DEv~tG~Gr--tG~~~a~~~~gv-~PDi~t~--gK~l 272 (422)
T PRK05630 204 IIIEPIVQGAGGMRFHDVALIEGVRTLCDKH------DILLIADEIATGFGR--TGELFATLAAGV-TPDIMCV--GKAL 272 (422)
T ss_pred EEEechhcCcCCcccCCHHHHHHHHHHHHHc------CCEEEEecceeCCCc--CchhhHHHhcCC-CCCeeee--echh
Confidence 555432 3334543 4689999999999 999999999966321 1110000 1122 2566644 4766
Q ss_pred CCC-CCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHH
Q 014163 280 LVY-AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGL 358 (429)
Q Consensus 280 ~~p-~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L 358 (429)
.++ ..+|.++.+++ +.+.+...... ....-..++.+.+ ....+..++++.+.++ ...++..++.++|.+.|
T Consensus 273 ~gG~~p~~av~~~~~--i~~~~~~~~~~-~~~~h~~T~~g~P--la~aaa~aaL~~l~~~---~~~~~~~~~g~~l~~~L 344 (422)
T PRK05630 273 TGGFMSFAATLCTDK--VAQLISTPNGG-GALMHGPTFMANP--LACAVAHASLEIIETG---MWRKQVKRIEAELIAGL 344 (422)
T ss_pred hcCccccceeeccHH--HHHHHhccCCC-CccccCCCCcCCH--HHHHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHH
Confidence 554 24566665532 21221100000 0000001111222 3444455666666544 33556777777887777
Q ss_pred HhCCCeEEeeC-CCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEe
Q 014163 359 EKTGRFEILSK-DVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVIS 424 (429)
Q Consensus 359 ~~~~~~~~~~~-~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~ 424 (429)
+++.....+.+ .....++.+.+..+ .+...+.+.+. ++|+.+... + ..+|++.
T Consensus 345 ~~l~~~~~v~~vRg~Gl~~~ie~~~~--~~~~~~~~~~~----~~Gl~~~~~------g-~~l~~~P 398 (422)
T PRK05630 345 SPLAHLPGVADVRVLGAIGVVEMEQP--VDMEEATQAAV----DHGVWLRPF------G-RLVYVMP 398 (422)
T ss_pred HHhhcCCCeeeeeccccEEEEEECCc--ccHHHHHHHHH----HCCeEEEec------C-CEEEEEC
Confidence 65422112221 11345666666432 23345555565 999887531 2 3577754
No 366
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=98.89 E-value=2.7e-07 Score=89.49 Aligned_cols=307 Identities=14% Similarity=0.058 Sum_probs=158.5
Q ss_pred ChHHHHHHHHHHcCcCC----CCCccChhhHHHHHHHHHHHHHhhCCC-CCCCCCCCceEeCCchHHHHHHHHHHHHHHH
Q 014163 68 MEPECDKLVMASINKNY----VDMDEYPVTTELQNRCVNMIAHLFNTP-VADDKTAVGVGTVGSSEAIMLAGLAFKRKWQ 142 (429)
Q Consensus 68 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~le~~~~~~la~l~g~~-~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~ 142 (429)
..|++.+++.+-+++=. ......| .. ++.+.|+++..-. - ..+.++++||+|+-.+++.++..+.
T Consensus 61 ~~~~i~~Ai~~Q~~~l~~~~~~~~t~~P-a~----~LA~~L~~~aP~~~l-----~~vFf~~sGSeAvEtAlKma~qY~~ 130 (449)
T COG0161 61 GRPEIAEAIKKQLDKLPHVMFGGFTHEP-AI----ELAEKLAELAPEGGL-----DHVFFTDSGSEAVETALKMALQYWR 130 (449)
T ss_pred CCHHHHHHHHHHHHhCCchhhcccCCch-HH----HHHHHHHHhCCCCCc-----cEEEEeCCchHHHHHHHHHHHHHHH
Confidence 45778888776665522 2223334 22 4556677777621 1 2389999999999999999998765
Q ss_pred HHHHhcCCCCCCcEEEE-cCCCchHHHHHHHhcCc-------------eeEEEeccC-------Cccc----cCHHHHHH
Q 014163 143 QKRKEQGKPYDKPNIVT-GANVQVCWEKFARYFEV-------------ELKEVKLEE-------GYYV----MNPVKAVE 197 (429)
Q Consensus 143 ~~~~~~g~~~~~~~vi~-~~~~h~s~~~~~~~~G~-------------~v~~v~~~~-------~~~~----~d~~~l~~ 197 (429)
.+ |.+. +..++. ....|....-++...|. ++..+|... +.+. -..++|++
T Consensus 131 ~~----G~p~-r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~ 205 (449)
T COG0161 131 AR----GQPQ-RKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEA 205 (449)
T ss_pred hc----CCCc-ceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHH
Confidence 32 3322 223443 44456543333333331 122333211 1111 33667888
Q ss_pred Hhhh---CCeEEEEeeCCC-c-cccccC----hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc-ccCCCC
Q 014163 198 LVDE---NTICVAAILGST-L-TGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPL 267 (429)
Q Consensus 198 ~i~~---~~~~v~~~~~~~-~-tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~ 267 (429)
+|.+ ++.+-++.-|-- . .|.+-| ++++.++|++| |+++|.|++--||.- ...-... ..++ .
T Consensus 206 ~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky------~ILlI~DEV~tGFGR--TG~~FA~e~~gi-~ 276 (449)
T COG0161 206 LILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKY------GILLIADEVATGFGR--TGKMFACEHAGI-V 276 (449)
T ss_pred HHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHc------CcEEEeecceeCCCc--CchhhhhhhcCC-C
Confidence 8776 344433333322 2 344422 78999999999 999999999866431 1100000 1111 2
Q ss_pred eeEEEEcCcccCCCCC-CeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHH
Q 014163 268 VKSINVSGHKYGLVYA-GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMEN 346 (429)
Q Consensus 268 ~d~~~~s~hK~~~~p~-g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~ 346 (429)
.|.++++ |.+.+++ ..|.++++++ +.+.+. ..+.+...-.+|+ | ...++..+++..+..-.-+.++++
T Consensus 277 PDi~~~a--KGLT~GY~Pl~a~l~~~~--I~~~~~--~~~~~~f~HG~TY--s---ghPlacAaAla~L~i~e~e~l~~~ 345 (449)
T COG0161 277 PDILCLA--KGLTGGYLPLSAVLTSDR--IYEAFS--DGDAGAFMHGHTY--S---GNPLACAAALANLDILEEEDLLER 345 (449)
T ss_pred CCeeeec--ccccccchhhHhHhhhHH--HHHHHh--cccCCeeccCCcc--c---cCHHHHHHHHHHHHHHHhcCHHHH
Confidence 5666543 6544332 2344454432 112211 1111111111221 1 233344444444332222455666
Q ss_pred HHHHHHHHHHHHHh-CCCeEEeeCCCCce-EEEEEecCCCCCC---HHHHHHHHHHHHhccCceeccc
Q 014163 347 CMGNARALREGLEK-TGRFEILSKDVGVP-LVAFSLKDSSAHT---VFEISEGLRKKLNRFQVVYPQK 409 (429)
Q Consensus 347 ~~~~~~~l~~~L~~-~~~~~~~~~~~~~~-~v~f~~~~~~~~~---~~~~~~~L~~~l~~~G~~~~~~ 409 (429)
..++..+|.+.|++ +.+...+.+-...+ +..+.+..+.... ..++..++.+...++|+.+++.
T Consensus 346 ~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~ 413 (449)
T COG0161 346 VAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPL 413 (449)
T ss_pred HHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeec
Confidence 77888888888887 44333444432333 4566665432111 2455666666666999998864
No 367
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=98.88 E-value=8.1e-07 Score=88.36 Aligned_cols=296 Identities=10% Similarity=0.035 Sum_probs=143.6
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
..+|.+.+++.+.++.... +. .+ ...+.++.+.+.+++... ....++++||||+..|++.++..
T Consensus 64 h~~p~v~~Ai~~q~~~~~~-~~-~~--~~~~~~la~~l~~~~p~~------~~v~f~~sGseA~e~AlklAr~~------ 127 (431)
T PRK06209 64 HAYPPVVEAVREALQDGCN-FT-RP--SAIELDAAESFLELIDGA------DMVKFCKNGSDATSAAVRLARAY------ 127 (431)
T ss_pred CCCHHHHHHHHHHHHhCcC-CC-CC--CHHHHHHHHHHHHhCCcc------ceEEEecCHHHHHHHHHHHHHHH------
Confidence 3468888888877765332 21 22 233445667777776321 13889999999999999998763
Q ss_pred hcCCCCCCcEEEEc-CCCchHHHHH---HH--hcCce--eEEEeccCCccccCHHHHHHHhhh---CCeEEEEeeCCCcc
Q 014163 147 EQGKPYDKPNIVTG-ANVQVCWEKF---AR--YFEVE--LKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGSTLT 215 (429)
Q Consensus 147 ~~g~~~~~~~vi~~-~~~h~s~~~~---~~--~~G~~--v~~v~~~~~~~~~d~~~l~~~i~~---~~~~v~~~~~~~~t 215 (429)
.| +..|+.. ...+.++... .. ..|.. .......-. .-|+++|+++++. +..+|++-......
T Consensus 128 -tg----r~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~d~~~l~~~l~~~~~~~aavi~Epv~g~~ 200 (431)
T PRK06209 128 -TG----RDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTFR--YNDIASLEALFEDHPGRIACVILEPATADE 200 (431)
T ss_pred -hC----CCeEEEeccCccccccccccccCCCCCCCChhHhccccccC--CCCHHHHHHHHHhCCCCEEEEEEccccCCC
Confidence 12 2455543 1221111100 00 01111 000000000 1278999998864 23344432221112
Q ss_pred ccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCC
Q 014163 216 GEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDD 295 (429)
Q Consensus 216 G~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~ 295 (429)
+....+++|.++|++| |+++++|+++.|+.. ........+++ ..|.+++ -|.+.++..+|.++.+++ .
T Consensus 201 ~~~~~l~~l~~lc~~~------g~lLI~DEv~tG~~~--~~~g~~~~~gv-~PDi~t~--gK~lggG~p~~av~~~~~-i 268 (431)
T PRK06209 201 PQDGFLHEVRRLCHEN------GALFILDEMITGFRW--HMRGAQKLYGI-VPDLSCF--GKALGNGFAVSALAGKRE-Y 268 (431)
T ss_pred CCHHHHHHHHHHHHHc------CCEEEEEcccccCCc--CcchhhHHhCC-Ccceeee--hhhhcCCcccEEEEEHHH-H
Confidence 2334599999999999 999999999966421 10001111222 2565443 476666555677776532 2
Q ss_pred cccccccccCCCCCCCCCceeccC--CchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHh----CCCeE--Ee
Q 014163 296 LPDELVFHINYLGSDQPTFTLNFS--KGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEK----TGRFE--IL 367 (429)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~t--r~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~----~~~~~--~~ 367 (429)
. +.+... .......+....| .+.....+..++++.+.+++ ..++..++.++|++.|++ .+ +. +-
T Consensus 269 ~-~~~~~~---~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~L~~~~~~~~-~~~~vr 340 (431)
T PRK06209 269 M-ELGGLE---HTDRERVFLLSTTHGAETHALAAAIATMAIYRDED---VIERLHEQGAKLAAGVNEAAAEHG-LQDHVR 340 (431)
T ss_pred H-hhhccc---ccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccC---HHHHHHHHHHHHHHHHHHHHHhCC-CCeEEE
Confidence 1 110000 0000000101112 22234555666777765443 455555566666666554 44 22 11
Q ss_pred eCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCcee
Q 014163 368 SKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVY 406 (429)
Q Consensus 368 ~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~ 406 (429)
.......+..+. .........++...+.+++.++|+.+
T Consensus 341 ~~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~Gi~~ 378 (431)
T PRK06209 341 VSGRPCCLTYST-LDGNGQPSQAFRTLFLQETIRRGVLM 378 (431)
T ss_pred eecceEEEEEec-CCcccCCcHHHHHHHHHHHHHCCccc
Confidence 111111222211 11111223445556666666999875
No 368
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=98.88 E-value=4.1e-06 Score=83.89 Aligned_cols=306 Identities=10% Similarity=0.011 Sum_probs=160.7
Q ss_pred ChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHh
Q 014163 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (429)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~ 147 (429)
.+|.+.+++.+.+++-.... .....+.+.++.+.|+++++... ....++++|+||+..|++.++..
T Consensus 88 ~~p~v~~Ai~~ql~~~~~~~--~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~sGseAve~AlklAr~~------- 153 (459)
T PRK06082 88 GHPHVIEKVKEQMAKLPFSP--RRFTNETAIECAEKLTEIAGGEL-----NRVLFAPGGTSAIGMALKLARHI------- 153 (459)
T ss_pred CCHHHHHHHHHHHHhCCCcc--CccCCHHHHHHHHHHHHhCCCCC-----CEEEECCCcHHHHHHHHHHHHHh-------
Confidence 56888888887776532211 11223445566677888775321 13889999999999999998753
Q ss_pred cCCCCCCcEEE-EcCCCchHHHHHHHhcCc------------eeEEEeccCC-c--c-cc------CHHHHHHHhhh--C
Q 014163 148 QGKPYDKPNIV-TGANVQVCWEKFARYFEV------------ELKEVKLEEG-Y--Y-VM------NPVKAVELVDE--N 202 (429)
Q Consensus 148 ~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~------------~v~~v~~~~~-~--~-~~------d~~~l~~~i~~--~ 202 (429)
. ++..|+ +....|.....+....|- ++..+|.... . + .. +++.|++.++. +
T Consensus 154 t----gr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~ 229 (459)
T PRK06082 154 T----GNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKEGG 229 (459)
T ss_pred c----CCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcCCC
Confidence 1 124454 455566544333333221 1233432110 0 0 01 23567777753 3
Q ss_pred CeEEEEeeCCCcccc-ccC---hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc-ccCCCCeeEEEEcCcc
Q 014163 203 TICVAAILGSTLTGE-FED---VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINVSGHK 277 (429)
Q Consensus 203 ~~~v~~~~~~~~tG~-~~~---l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~d~~~~s~hK 277 (429)
..+|++--.. ..|. +-| +++|.++|++| |+++++|+++.|+.- ...-+.. .+++ ..|.+++ -|
T Consensus 230 vAavIvEPv~-g~g~~~~~~~yl~~lr~lc~~~------g~llI~DEV~tG~GR--tG~~fa~e~~gv-~PDiv~~--gK 297 (459)
T PRK06082 230 IGAFIAEAVR-NTDVQVPSKAYWKRVREICDKH------NVLLIIDEIPNGMGR--TGEWFTHQAYGI-EPDILCI--GK 297 (459)
T ss_pred EEEEEECCcc-CCCCcCCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc--cchhhHhHhhCC-CCCEEEe--cc
Confidence 3444443332 2243 344 89999999999 999999999976421 1110010 1122 3677763 46
Q ss_pred cCCCCC-CeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHH
Q 014163 278 YGLVYA-GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALRE 356 (429)
Q Consensus 278 ~~~~p~-g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~ 356 (429)
.+.++. .+|.++.++. +.... ...+. ..++.+.+ ....+..++|+.+.++ +..++..++.++|.+
T Consensus 298 gl~gG~~P~~av~~~~~--i~~~~--~~~~~-----~~T~~gnp--l~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~ 363 (459)
T PRK06082 298 GLGGGLVPIAAMITKDK--YNTAA--QISLG-----HYTHEKSP--LGCAAALATIEVIEQE---GLLEKVKADSQFMRE 363 (459)
T ss_pred cccCCCCcceEEEEcHH--HHhhc--cCCCC-----CCCCCcCH--HHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHH
Confidence 666553 5677776542 21111 00000 01221222 3344455566665443 356677778888888
Q ss_pred HHHhCCC-eEEeeCC-CCceEEEEEecCCCC--CCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEE
Q 014163 357 GLEKTGR-FEILSKD-VGVPLVAFSLKDSSA--HTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVI 423 (429)
Q Consensus 357 ~L~~~~~-~~~~~~~-~~~~~v~f~~~~~~~--~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~ 423 (429)
.|+++.. ..++..- ....++.+.+..+.. ....+.+..+.+++.++|+.+... +...+|++
T Consensus 364 ~L~~l~~~~~~i~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~------~~~~i~~~ 428 (459)
T PRK06082 364 RLLEMKAKYPLIGDVRGIGLLWGVELVTDRHTKERAYDEAEAVLYRCLNNGLSFKVS------QGNVIQLS 428 (459)
T ss_pred HHHHHHhhCCCeeeeeeccceeEEEEccCccccCccHHHHHHHHHHHHhCCCEEEec------CCCEEEEe
Confidence 8876421 2222221 123455665542111 111234555666666999887531 23458876
No 369
>PRK06149 hypothetical protein; Provisional
Probab=98.87 E-value=2.3e-06 Score=93.38 Aligned_cols=309 Identities=12% Similarity=-0.012 Sum_probs=156.5
Q ss_pred ChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHh
Q 014163 68 MEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKE 147 (429)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~ 147 (429)
.+|.+.+++.+.+....... ....+...++.+.|++++.-.. ....++++|+||+..|++.++..
T Consensus 600 ~hp~v~~Ai~~q~~~l~~~~---~~~~~~~~elae~L~~~~p~~~-----~~v~f~~SGsEA~e~AlklAr~~------- 664 (972)
T PRK06149 600 GHPRLAAAAARQWSLLNTNS---RFHYAAVAEFSERLAALAPDGL-----DTVFLVNSGSEANDLAIRLAWAA------- 664 (972)
T ss_pred CCHHHHHHHHHHHHhccccc---cccCHHHHHHHHHHHHhCCCCc-----CEEEEeCCchHHHHHHHHHHHHh-------
Confidence 46888887777665432211 1122334456666777762211 13889999999999999998763
Q ss_pred cCCCCCCcEEEEcC-CCchHHHHHHHhcC----------c---eeEEEeccCC-c--cc-cC-----HHHHHHHhh----
Q 014163 148 QGKPYDKPNIVTGA-NVQVCWEKFARYFE----------V---ELKEVKLEEG-Y--YV-MN-----PVKAVELVD---- 200 (429)
Q Consensus 148 ~g~~~~~~~vi~~~-~~h~s~~~~~~~~G----------~---~v~~v~~~~~-~--~~-~d-----~~~l~~~i~---- 200 (429)
.| +..|+... ..|.....+....+ . .+..++.... . +. .| .+++++.++
T Consensus 665 tg----r~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 740 (972)
T PRK06149 665 SG----RRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDA 740 (972)
T ss_pred cC----CCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhh
Confidence 12 24555544 45532211111100 0 1223332110 0 11 11 244444443
Q ss_pred --hCCeEEEEeeCCCccccccC----hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCC-cc-ccCCCCeeEEE
Q 014163 201 --ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL-EW-DFRLPLVKSIN 272 (429)
Q Consensus 201 --~~~~~v~~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~-~~-~~~~~~~d~~~ 272 (429)
+++.+|++--.....|.+-+ +++|.++|++| |+++|+|+++.|+.- ....+ .. .+++ ..|.++
T Consensus 741 ~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~------g~llI~DEV~tGfGR--tG~~~~a~e~~gv-~PDivt 811 (972)
T PRK06149 741 SGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRAR------GGVCIADEVQVGYGR--LGHYFWGFEQQGV-VPDIIT 811 (972)
T ss_pred cCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHc------CCEEEEEeehhcCCc--cCccchhhhhcCC-CCCEEE
Confidence 13345555444445577777 99999999999 999999999955321 11100 11 1122 367775
Q ss_pred EcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Q 014163 273 VSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNAR 352 (429)
Q Consensus 273 ~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~ 352 (429)
+ -|.++++..+|.++++++ . .+.+... .+..+ +..|.+ ....+..++|+.+.++ +..++..++.+
T Consensus 812 ~--gK~lg~G~Pl~av~~~~~-i-~~~~~~~-~~~~s-----T~~gnP--~~~aaala~L~~i~~e---~l~~~~~~~G~ 876 (972)
T PRK06149 812 M--AKGMGNGHPLGAVITRRE-I-AEALEAE-GYFFS-----STGGSP--VSCRIGMAVLDVLREE---KLQENARRVGD 876 (972)
T ss_pred e--cccccCCeeeEEEEEcHH-H-HhhhccC-CcccC-----CCCCCH--HHHHHHHHHHHHHHhc---CHHHHHHHHHH
Confidence 4 466666667788887642 2 2222111 11111 111222 3444455566655544 45566667777
Q ss_pred HHHHHHHhCCC-eEEeeCC-CCceEEEEEecCC-CC-CCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEE
Q 014163 353 ALREGLEKTGR-FEILSKD-VGVPLVAFSLKDS-SA-HTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVI 423 (429)
Q Consensus 353 ~l~~~L~~~~~-~~~~~~~-~~~~~v~f~~~~~-~~-~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~ 423 (429)
+|++.|+++.. ..++..- ...-++.+.+... .. ....+....+.+++.++|+.+... -.+...||+.
T Consensus 877 ~l~~~L~~l~~~~~~i~~vrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~----g~~~~vl~~~ 947 (972)
T PRK06149 877 HLKARLEALADRHPLIGAVHGMGLYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQPT----GDHLNILKIK 947 (972)
T ss_pred HHHHHHHHHHHhCCCeEEEeecceEEEEEEecCcccCCCChHHHHHHHHHHHhCCeEEeec----CCCCCEEEEE
Confidence 77777765411 1122211 1233455555321 00 011234555666666999987642 1223457764
No 370
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.86 E-value=4e-06 Score=84.02 Aligned_cols=313 Identities=12% Similarity=0.070 Sum_probs=158.5
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEe-CCchHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGT-VGSSEAIMLAGLAFKRKWQQKR 145 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t-~g~t~a~~~al~a~~~~~~~~~ 145 (429)
..+|.+.+++.+.+++...... .....+.+.++.+.+.+++..+.. ......++ ++|+||+..|++.++..
T Consensus 79 h~~p~v~~Ai~~ql~~~~~~~~-~~~~~~~~~~la~~L~~~~p~~~~--~~~~v~f~~~SGSEAve~AlklAr~~----- 150 (464)
T PRK06938 79 HNHPVVIEAIQQVLADELPLHT-LDLTTPVKDQFVQDLFASLPEAFA--REAKIQFCGPTGTDAVEAALKLVKTA----- 150 (464)
T ss_pred CCCHHHHHHHHHHHHhhhcccc-cccCCHHHHHHHHHHHHhCccccc--ccceEEEeCCCcHHHHHHHHHHHHHh-----
Confidence 3568888888877754321111 011123333455556665532110 00124454 69999999999999763
Q ss_pred HhcCCCCCCcEEEEcCC-CchHHHHHHHhcC----------c--eeEEEeccCCc-c----------ccCHHHHHHHhhh
Q 014163 146 KEQGKPYDKPNIVTGAN-VQVCWEKFARYFE----------V--ELKEVKLEEGY-Y----------VMNPVKAVELVDE 201 (429)
Q Consensus 146 ~~~g~~~~~~~vi~~~~-~h~s~~~~~~~~G----------~--~v~~v~~~~~~-~----------~~d~~~l~~~i~~ 201 (429)
. ++..|+.-.. .|....-+....| . ++..+|..... . ..+++.+++.+++
T Consensus 151 --t----gr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 224 (464)
T PRK06938 151 --T----GRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDD 224 (464)
T ss_pred --h----CCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHh
Confidence 1 2345665444 4543322222221 0 23445432110 0 1236778888864
Q ss_pred ------CCeEEEEeeCCCcccccc----ChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc-ccCCCCeeE
Q 014163 202 ------NTICVAAILGSTLTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKS 270 (429)
Q Consensus 202 ------~~~~v~~~~~~~~tG~~~----~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~d~ 270 (429)
+..+|++--.....|.+- =++++.++|++| |+++|+|+++.|+.- ...-+.. .+++ ..|.
T Consensus 225 ~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~------giLlI~DEV~tGfGR--tG~~~a~e~~gv-~PDi 295 (464)
T PRK06938 225 PESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEA------GIPLIVDEIQSGFGR--TGKMFAFEHAGI-IPDV 295 (464)
T ss_pred hccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeccccCCCc--CcHHHHHHhcCC-CCCE
Confidence 234554443333335542 278999999999 999999999976521 1100011 1122 3677
Q ss_pred EEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHH
Q 014163 271 INVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGN 350 (429)
Q Consensus 271 ~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~ 350 (429)
+++ -|.+.++..+|.++.++. + +.+ ......+ |+.|.+ ....+..++|+.+.++ +..++..++
T Consensus 296 v~~--gKglggG~PlsAv~~~~~--~-~~~--~~~~~~~-----T~~gnp--la~Aaa~a~L~~l~~~---~l~~~~~~~ 358 (464)
T PRK06938 296 VVL--SKAIGGSLPLAVVVYREW--L-DTW--QPGAHAG-----TFRGNQ--MAMAAGSATLRYIKEH---RLAEHAAAM 358 (464)
T ss_pred EEe--eccccCCCceEEEeehhH--h-hcc--CCCCCCC-----CCCcCH--HHHHHHHHHHHHHHHh---HHHHHHHHH
Confidence 775 366666677888887643 2 221 1111111 111222 3444455556655443 455666667
Q ss_pred HHHHHHHHHhCC-CeEEeeCCC-CceEEEEEecCCCCC-------C-HHHHHHHHHHHHhccCceecccCCCCCCCceEE
Q 014163 351 ARALREGLEKTG-RFEILSKDV-GVPLVAFSLKDSSAH-------T-VFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKL 420 (429)
Q Consensus 351 ~~~l~~~L~~~~-~~~~~~~~~-~~~~v~f~~~~~~~~-------~-~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~l 420 (429)
.++|.+.|+++- ...++..-. ..-++.+.+...... . ..++...+.+.+.++|+.+... .. ....|
T Consensus 359 G~~l~~~L~~l~~~~~~i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~---g~-~~~~l 434 (464)
T PRK06938 359 GERLREHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQRECLRRGLILELG---GR-HGSVV 434 (464)
T ss_pred HHHHHHHHHHHHHhCCCeeeeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHHHHCCeEEeec---CC-CCCEE
Confidence 777777776541 122222211 233455655321100 0 1244555666666999887531 11 12457
Q ss_pred EEE
Q 014163 421 RVI 423 (429)
Q Consensus 421 Ri~ 423 (429)
|+.
T Consensus 435 ~~~ 437 (464)
T PRK06938 435 RFL 437 (464)
T ss_pred EEE
Confidence 775
No 371
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.86 E-value=1.5e-06 Score=87.06 Aligned_cols=326 Identities=10% Similarity=-0.049 Sum_probs=155.3
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
..+|.+.+++.+.++.-..... .....+...++.+.+.+++........-....++++||||+..|++.++.....+
T Consensus 80 h~~p~i~~Ai~~q~~~l~~~~~-~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~-- 156 (472)
T PRK08742 80 HAEPRIGAAIAAQAGELEQVML-AGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNR-- 156 (472)
T ss_pred CCCHHHHHHHHHHHHhCCCccc-cccCCHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhc--
Confidence 4568888888776653211110 0111233446666777766321000000138899999999999999998643211
Q ss_pred hcCCCCCCcEEEEcCC-CchHHHHHHHhcCc------------eeEEEeccCCc---c--------ccCHHHHHHHhhh-
Q 014163 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFEV------------ELKEVKLEEGY---Y--------VMNPVKAVELVDE- 201 (429)
Q Consensus 147 ~~g~~~~~~~vi~~~~-~h~s~~~~~~~~G~------------~v~~v~~~~~~---~--------~~d~~~l~~~i~~- 201 (429)
|.. ++.+|+.-.. .|....-+....|. ++..+|..... + .-+++.+++.+..
T Consensus 157 --g~~-~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 233 (472)
T PRK08742 157 --GEH-RRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQS 233 (472)
T ss_pred --CCC-CCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHhC
Confidence 111 2345655444 45433222222221 12333332100 0 1135677777753
Q ss_pred --CCeEEEEee-CCCccccc----cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccc-cCCCCeeEEEE
Q 014163 202 --NTICVAAIL-GSTLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPLVKSINV 273 (429)
Q Consensus 202 --~~~~v~~~~-~~~~tG~~----~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~~~~~d~~~~ 273 (429)
+..+|++-- .....|.+ +=++++.++|++| |+++|+|+++.|+.- ...-+... +++ ..|.+++
T Consensus 234 ~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~------gillI~DEV~TGfGR--tG~~~a~e~~gv-~PDiv~~ 304 (472)
T PRK08742 234 PGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAH------GAFLIADEIATGFGR--TGTLFACEQAGV-MPDLLCL 304 (472)
T ss_pred CCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCC--CccchHHHhcCC-CCCEEEE
Confidence 334444432 13344554 2378999999999 999999999976421 11111111 122 3677775
Q ss_pred cCcccCCCCC-CeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Q 014163 274 SGHKYGLVYA-GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNAR 352 (429)
Q Consensus 274 s~hK~~~~p~-g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~ 352 (429)
-|.+.+++ .+|.++++++ . .+.+..... .+...-..|+.|.+ ....+..++|+.+.++++ .++..++.+
T Consensus 305 --gKgl~gG~~Plaav~~~~e-i-~~~~~~~~~-~~~~~h~~T~~gnp--l~~Aaa~a~L~~i~~~~l---~~~~~~~g~ 374 (472)
T PRK08742 305 --SKGLTGGFLPLSAVLATQQ-L-YDAFLDDSR-ERAFLHSHSYTGNP--LACAAALATLDIFADDDV---IARNQPTAA 374 (472)
T ss_pred --cccccCCCCCcceeeccHH-H-HHHhhccCc-cCccCcCCCCCccH--HHHHHHHHHHHHHHHCCH---HHHHHHHHH
Confidence 36665553 5677776542 2 121110000 00000001111222 334455556666655443 444555555
Q ss_pred HHHHHHHhCCCeEEeeCCC-CceEEEEEecCCCC----CC-HHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEe
Q 014163 353 ALREGLEKTGRFEILSKDV-GVPLVAFSLKDSSA----HT-VFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVIS 424 (429)
Q Consensus 353 ~l~~~L~~~~~~~~~~~~~-~~~~v~f~~~~~~~----~~-~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~ 424 (429)
+|.+.++.+....++.+.. ..-++.+.+..+.. .. ...+...+.+++.++|+.+... + ..+|++-
T Consensus 375 ~l~~~~~~~~~~~~i~dvRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~------g-~vi~~~P 445 (472)
T PRK08742 375 RMTQLAAQIGEHPHVADVRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPL------G-DVLYWMP 445 (472)
T ss_pred HHHHHHHHHhcCCCeeeEeccceEEEEEeccCccccccCCchhHHHHHHHHHHHHCCeEEEec------C-CEEEEEC
Confidence 5555444332122222211 23355555532110 01 1233445555555999887531 1 3578754
No 372
>PRK07480 putative aminotransferase; Validated
Probab=98.86 E-value=1.1e-06 Score=87.95 Aligned_cols=310 Identities=13% Similarity=-0.019 Sum_probs=151.2
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
..+|.+.+++.+.++.-......+....+.+.++.+.|++++.... ....++++|+||+..|++.++.....
T Consensus 66 h~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~SGseA~e~AlklAr~~~~~--- 137 (456)
T PRK07480 66 YGRKELADAAARQMRELPYYNTFFKTTHPPAIELAAKLAEVAPPGF-----NHVFFTNSGSEANDTVLRMVRHYWAL--- 137 (456)
T ss_pred CCCHHHHHHHHHHHHhcCCcccccccCCHHHHHHHHHHHHhCCCCc-----CEEEEeCCcHHHHHHHHHHHHHHHHh---
Confidence 3468888888777765322111111223444466677777764321 13889999999999999999763211
Q ss_pred hcCCCCCCcEEEEcC-CCchHHHHHHHhcCce------------eEEEeccCC---ccccC--------HHHHHHHhh--
Q 014163 147 EQGKPYDKPNIVTGA-NVQVCWEKFARYFEVE------------LKEVKLEEG---YYVMN--------PVKAVELVD-- 200 (429)
Q Consensus 147 ~~g~~~~~~~vi~~~-~~h~s~~~~~~~~G~~------------v~~v~~~~~---~~~~d--------~~~l~~~i~-- 200 (429)
.|.. ++..|+.-. ..|.....+....|.. +..++.... ....+ ++.|++.+.
T Consensus 138 -~g~~-~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 215 (456)
T PRK07480 138 -KGKP-QKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILEL 215 (456)
T ss_pred -cCCC-CCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhc
Confidence 1111 234566544 4454332222221211 122221100 00011 356665553
Q ss_pred --hCCeEEEEeeCCCccccccC----hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc-ccCCCCeeEEEE
Q 014163 201 --ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLVKSINV 273 (429)
Q Consensus 201 --~~~~~v~~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~d~~~~ 273 (429)
++..+|++--.....|.+.+ +++|.++|++| |+++|+|+++.|+.- ...-+.. .+++ ..|.+++
T Consensus 216 ~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~------g~llI~DEV~tGfGR--tG~~~a~~~~gv-~PDiv~~ 286 (456)
T PRK07480 216 GADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKY------DILLVADEVICGFGR--TGEWFGSQHFGI-KPDLMTI 286 (456)
T ss_pred CCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHc------CCEEEEechhhCCCc--CcchhhhhhcCC-CCCeeee
Confidence 23445555444444566655 89999999999 999999999976421 1111111 1122 2566654
Q ss_pred cCcccCCCCC-CeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHH-HHHH
Q 014163 274 SGHKYGLVYA-GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENC-MGNA 351 (429)
Q Consensus 274 s~hK~~~~p~-g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~-~~~~ 351 (429)
-|.+.++. .+|.++.+++ . .+.+....... .-..++.|.+ ....+..++|+.+.+++ ..++. .++.
T Consensus 287 --gK~l~gG~~Pi~av~~~~~-i-~~~~~~~~~~~---~~~~T~~gnp--l~~Aaa~a~L~~l~~~~---l~~~~~~~~g 354 (456)
T PRK07480 287 --AKGLTSGYIPMGAVGVGDR-V-AEVLIEEGGEF---NHGFTYSGHP--VAAAVALANLRILRDEG---IVERVRDDTG 354 (456)
T ss_pred --ehhhccCCccceEEEEcHH-H-HHHHhcCCCCc---ccCCCCCcCH--HHHHHHHHHHHHHHhCC---HHHHHHHHHH
Confidence 36555543 4666676532 2 12221001100 0011221222 34455566666665543 44455 3556
Q ss_pred HHHHHHHHhCCCeEEeeCC-CCceEEEEEecCCCC----C-CHHHHHHHHHHHHhccCceec
Q 014163 352 RALREGLEKTGRFEILSKD-VGVPLVAFSLKDSSA----H-TVFEISEGLRKKLNRFQVVYP 407 (429)
Q Consensus 352 ~~l~~~L~~~~~~~~~~~~-~~~~~v~f~~~~~~~----~-~~~~~~~~L~~~l~~~G~~~~ 407 (429)
++|.+.|+++....++..- ....++.+.+..+.. . +...+...+.+++.++|+.+.
T Consensus 355 ~~l~~~l~~l~~~~~i~~vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~ 416 (456)
T PRK07480 355 PYLQKRLRELADHPLVGEVRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMR 416 (456)
T ss_pred HHHHHHHHHhhcCCCeeeEEeecceEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEEe
Confidence 6666666553222122111 123344555532111 0 112233455555559998875
No 373
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.86 E-value=8.4e-07 Score=87.98 Aligned_cols=326 Identities=9% Similarity=-0.053 Sum_probs=165.5
Q ss_pred CCCCCccccccc----cCCChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchH
Q 014163 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (429)
Q Consensus 53 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~ 128 (429)
+|+.++.+.++. -...+|.+.+++.+.+++..+... .....+.+.++.+.+.+++.... ....++++|+|
T Consensus 42 dG~~ylD~~~g~~~~~lGh~~p~v~~ai~~q~~~~~~~~~-~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~sGse 115 (429)
T PRK06173 42 DGRRLIDGMSSWWAALHGYNHPRLNAAATNQLAKMSHIMF-GGFTHEPAVELAQKLLEILPPSL-----NKIFFADSGSV 115 (429)
T ss_pred CCCEEEEccchHHhccCCCCCHHHHHHHHHHHHhcCCccc-cccCCHHHHHHHHHHHhhCCCCc-----CEEEEeCCchH
Confidence 455544443332 124468888888877765322111 11122333456666777653211 13889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCC-CchHHHHHHHhcC--------c-----eeEEEeccCCc-----cc
Q 014163 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGAN-VQVCWEKFARYFE--------V-----ELKEVKLEEGY-----YV 189 (429)
Q Consensus 129 a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~-~h~s~~~~~~~~G--------~-----~v~~v~~~~~~-----~~ 189 (429)
|+..|++.++..... .|.. ++..|+.-.. .|.....+....| . .+..+|..... ..
T Consensus 116 Ave~AlklAr~~~~~----~g~~-~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 190 (429)
T PRK06173 116 AVEVAMKMALQYQQA----KGEV-QRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWND 190 (429)
T ss_pred HHHHHHHHHHHHHHH----hCCC-CCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCCcccchhHHH
Confidence 999999999864211 1111 2345655444 4543222221111 0 12333321100 01
Q ss_pred cCHHHHHHHhhh---CCeEEEEeeC-CCccccc----cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc
Q 014163 190 MNPVKAVELVDE---NTICVAAILG-STLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW 261 (429)
Q Consensus 190 ~d~~~l~~~i~~---~~~~v~~~~~-~~~tG~~----~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~ 261 (429)
-+++.|++.+.. +..+|++--. ....|.+ +=+++|.++|++| |+++++|+++.|+.- ...-+..
T Consensus 191 ~~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~------g~llI~DEv~tG~Gr--tG~~~a~ 262 (429)
T PRK06173 191 EAIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQY------GVLLIFDEIATGFGR--TGKLFAL 262 (429)
T ss_pred HHHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHc------CCeEEecchhcCCCc--CCcchHH
Confidence 246778888863 3344444332 3444544 2378999999999 999999999965311 1111101
Q ss_pred -ccCCCCeeEEEEcCcccCCCCC-CeEEEEEeCCCCccccccccc--CCCCCCCCCceeccCCchhHHHHHHHHHHHcCH
Q 014163 262 -DFRLPLVKSINVSGHKYGLVYA-GVGWVVWRTKDDLPDELVFHI--NYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF 337 (429)
Q Consensus 262 -~~~~~~~d~~~~s~hK~~~~p~-g~g~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~ 337 (429)
.+++ ..|.+++ -|.+.++. .++.++.+++ . .+.+.... .+..+ .++.+. .....+..++|+.+.+
T Consensus 263 ~~~gv-~PDiv~~--gK~l~gG~~p~~a~~~~~~-i-~~~~~~~~~~~~~~~----~T~~g~--p~~~aaa~a~l~~i~~ 331 (429)
T PRK06173 263 EHAGV-VPDIMCI--GKALTGGYLTLSATITTEA-I-AQTICSGEAKCFMHG----PTFMAN--PLACAIAAESIRLLLE 331 (429)
T ss_pred HhcCC-CCCEEEe--ehhhhCCccccceEEecHH-H-HHHHhcCCCCccccC----CCCCcC--HHHHHHHHHHHHHHHh
Confidence 1222 3676663 46555442 4555555432 1 12111000 01100 011122 2345556666666644
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCC-CCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCC
Q 014163 338 EGYKNIMENCMGNARALREGLEKTGRFEILSKD-VGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPW 416 (429)
Q Consensus 338 ~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~ 416 (429)
+ ...++..++.++|.+.|+++.++..+... ....++.+.+..+ .+...+.+.|. ++|+.+... +
T Consensus 332 ~---~~~~~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel~~~--~~~~~i~~~l~----e~Gi~v~~~------g 396 (429)
T PRK06173 332 S---PWQQNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEMKEP--VNMATLQPRFV----EHGIWVRPF------G 396 (429)
T ss_pred C---CHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEeCCc--ccHHHHHHHHH----HCCeEEEec------C
Confidence 3 34677788888888888765323333221 1345666666432 23445555555 999987531 1
Q ss_pred ceEEEEEe
Q 014163 417 STKLRVIS 424 (429)
Q Consensus 417 ~~~lRi~~ 424 (429)
..+|+.-
T Consensus 397 -~~l~~~P 403 (429)
T PRK06173 397 -KLVYIMP 403 (429)
T ss_pred -CEEEEeC
Confidence 3577753
No 374
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=98.82 E-value=5.7e-06 Score=82.93 Aligned_cols=327 Identities=12% Similarity=-0.026 Sum_probs=163.4
Q ss_pred CCCCCccccccc----cCCChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchH
Q 014163 53 DGNPRLNLASFV----TTWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (429)
Q Consensus 53 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~ 128 (429)
+++.++.+.++. -...+|.+.+++.+.+++-..... .....+...++.+.+++++.... ....++++|+|
T Consensus 45 dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~ql~~l~~~~~-~~~~~~~~~~lae~L~~~~p~~~-----~~v~f~~sGsE 118 (466)
T PRK07030 45 EGKRYLDAVSSWWVNVFGHANPRINQRIKDQVDQLEHVIL-AGFSHEPVIELSERLVKITPPGL-----SRCFYADNGSS 118 (466)
T ss_pred CCCEEEEcchhHHhhcCCCCCHHHHHHHHHHHHhcCCccc-cccCCHHHHHHHHHHHHhCCCCc-----CEEEEeCCcHH
Confidence 455544443332 123468888888877765322111 11123444566677777663211 13889999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcC-CCchHHHHHHHhcCc------------eeEEEeccCCc---c----
Q 014163 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGA-NVQVCWEKFARYFEV------------ELKEVKLEEGY---Y---- 188 (429)
Q Consensus 129 a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~-~~h~s~~~~~~~~G~------------~v~~v~~~~~~---~---- 188 (429)
|+..|++.++..+..+ |. .++..|+.-. ..|....-+....|. .+..+|..... .
T Consensus 119 Ave~AlKlAr~~~~~~----g~-t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~ 193 (466)
T PRK07030 119 AIEVALKMSFHYWRNR----GK-PRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSW 193 (466)
T ss_pred HHHHHHHHHHHHHHHh----CC-CCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCH
Confidence 9999999997643211 11 0234565544 455443333332221 12333322100 0
Q ss_pred ----ccCHHHHHHHhhh---CCeEEEEee-CCCccccc----cChHHHHHHHHHhhhccCCCccEEeecccccccccccC
Q 014163 189 ----VMNPVKAVELVDE---NTICVAAIL-GSTLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY 256 (429)
Q Consensus 189 ----~~d~~~l~~~i~~---~~~~v~~~~-~~~~tG~~----~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~ 256 (429)
.-+++.+++.+.. +..+|++-- .....|.+ +=+++|.++|++| |+++|+|+++.|+.- ..
T Consensus 194 ~~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~------g~llI~DEV~TGfGR--tG 265 (466)
T PRK07030 194 EEHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRY------GVHLIHDEIAVGFGR--TG 265 (466)
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHc------CCEEEEeehhhCcCc--cc
Confidence 1135667777763 334444443 23344554 2378999999999 999999999976421 11
Q ss_pred CCCcc-ccCCCCeeEEEEcCcccCCCCC-CeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHH
Q 014163 257 PDLEW-DFRLPLVKSINVSGHKYGLVYA-GVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIR 334 (429)
Q Consensus 257 ~~~~~-~~~~~~~d~~~~s~hK~~~~p~-g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~ 334 (429)
.-+.. .+++ ..|.+++ -|.+.+++ .+|.++.+++ . .+.+.....-.+...-..++.|.+ ....+..++|+.
T Consensus 266 ~~~a~~~~gv-~PDiv~~--gKgl~gG~~Pi~av~~~~e-i-~~~~~~~~~~~~~~~h~~T~~gnp--la~aaa~a~L~~ 338 (466)
T PRK07030 266 TMFACEQAGI-RPDFLCL--SKALTGGYLPLAAVLTTDT-V-YQAFYDDYPTLRAFLHSHSYTGNP--LACAAALATLDI 338 (466)
T ss_pred cchHHHhcCC-CCCEEee--ehhccCCcccceEEEecHH-H-HHHHhcccccccccccCCCCCCCH--HHHHHHHHHHHH
Confidence 10111 1122 3677775 36666663 6777776542 2 122110000000000001111222 334445556666
Q ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCC-CCceEEEEEecCCCC----C-CHHHHHHHHHHHHhccCceecc
Q 014163 335 LGFEGYKNIMENCMGNARALREGLEKTGRFEILSKD-VGVPLVAFSLKDSSA----H-TVFEISEGLRKKLNRFQVVYPQ 408 (429)
Q Consensus 335 l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~-~~~~~v~f~~~~~~~----~-~~~~~~~~L~~~l~~~G~~~~~ 408 (429)
+.++ +..++..++.++|.+.|+++.....+... ....++.+.+..... . ........+.+++.++|+.+..
T Consensus 339 i~~~---~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~ 415 (466)
T PRK07030 339 FEQD---NVIENNRALARRMAEATAHLADHPHVAEVRQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHALERGALLRP 415 (466)
T ss_pred HHhc---CHHHHHHHHHHHHHHHHHHHhcCCCEEEeEeceeEEEEEeccCccccccCcchhHHHHHHHHHHHHCCeEEEe
Confidence 5543 45667777888888888765322222211 123345555532110 0 1112334555666699988753
No 375
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.80 E-value=6.2e-07 Score=86.32 Aligned_cols=204 Identities=13% Similarity=-0.036 Sum_probs=112.7
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
+.+|.+.+++.+.++...... ......+...++.+.|.++++-.. ....++++|++|+..|++.++..+..+ .
T Consensus 32 h~~p~i~~ai~~~~~~~~~~~-~~~~~~~~~~~la~~L~~~~p~~~-----~~v~f~~sGseAve~Alkla~~~~~~~-~ 104 (339)
T PF00202_consen 32 HNHPEIAEAIAEQANKLNYVS-FSGFTHPEAAELAEKLAELFPGGL-----DRVFFANSGSEAVEAALKLARQYHNKR-A 104 (339)
T ss_dssp BT-HHHHHHHHHHHHHCSSCS-TTTSEEHHHHHHHHHHHHHSSTTE-----EEEEEESSHHHHHHHHHHHHHHHHHHT-H
T ss_pred CCccccchhHHHHhhhccccc-ccceeccchhhhhhhhhhcccccc-----ceeeeccCchHHHHHHHHHhhcccccc-c
Confidence 345778888877766532211 111222334466777888883221 238899999999999999998322111 1
Q ss_pred hcCCCCCCcEEEEcCC-CchHHHHHHHhcC------------ceeEEEeccCCcc----ccCHHHHHHHh----hhCCeE
Q 014163 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFE------------VELKEVKLEEGYY----VMNPVKAVELV----DENTIC 205 (429)
Q Consensus 147 ~~g~~~~~~~vi~~~~-~h~s~~~~~~~~G------------~~v~~v~~~~~~~----~~d~~~l~~~i----~~~~~~ 205 (429)
.. ++..|+.... .|....-+....+ -.+..+|.+.... .-..+.+++.+ .++..+
T Consensus 105 ~~----~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaa 180 (339)
T PF00202_consen 105 YT----GRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNADEIAA 180 (339)
T ss_dssp HH----TTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGGGEEE
T ss_pred cc----CCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcCCcEEE
Confidence 12 2346666554 4442222222111 1245666543100 01122233322 223455
Q ss_pred EEEeeCCCccccc----cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccc-cCCCCeeEEEEcCcccCC
Q 014163 206 VAAILGSTLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWD-FRLPLVKSINVSGHKYGL 280 (429)
Q Consensus 206 v~~~~~~~~tG~~----~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~-~~~~~~d~~~~s~hK~~~ 280 (429)
|++--.....|.+ +=+++|.++|++| |+++++|+++.|+.- ...-+... +++ ..|.++++ |.+.
T Consensus 181 vivEPi~g~~G~~~~~~~~l~~l~~lc~~~------gillI~DEV~tG~gR--tG~~~a~~~~gv-~PDiv~~g--K~l~ 249 (339)
T PF00202_consen 181 VIVEPIQGEGGMIPPPPEYLRELRELCREH------GILLIADEVQTGFGR--TGKFFASEHYGV-DPDIVTFG--KGLG 249 (339)
T ss_dssp EEEESSBTTTTSBEE-TTHHHHHHHHHHHT------T-EEEEEETTTTTTT--TSSSSGHHHHTS-SSSEEEEE--GGGG
T ss_pred EEEeccccccCccccccchhhehccccccc------ccceecccccccccc--cCCccceecccc-cCcccccc--cchh
Confidence 5555544444554 2379999999999 999999999987531 11111111 122 37888886 8777
Q ss_pred CCCCeEEEEEeC
Q 014163 281 VYAGVGWVVWRT 292 (429)
Q Consensus 281 ~p~g~g~l~~~~ 292 (429)
++..+|.+++++
T Consensus 250 gG~p~sav~~~~ 261 (339)
T PF00202_consen 250 GGLPISAVLGSE 261 (339)
T ss_dssp TTSSEEEEEEEH
T ss_pred hhhhcccccccc
Confidence 778888888875
No 376
>PRK06148 hypothetical protein; Provisional
Probab=98.77 E-value=5.4e-06 Score=90.61 Aligned_cols=311 Identities=11% Similarity=0.042 Sum_probs=160.6
Q ss_pred CChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRK 146 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~ 146 (429)
..+|.+.+++.+.++.-..+. .+ ..+.+.++.+.|++++..+. ....++++||||+..|++.++..
T Consensus 638 H~hp~v~~Ai~~q~~~l~~~~-~~--~~~~~~~lAe~L~~~~p~~~-----~~v~f~nSGsEA~e~AlklAr~~------ 703 (1013)
T PRK06148 638 HAHPRVVAAAARQAARLNTNT-RY--LHDAIVAYAERLTATLPDGL-----TVAFFVNSGSEANSLALRLARAH------ 703 (1013)
T ss_pred CCCHHHHHHHHHHHhhcCCcC-Cc--CCHHHHHHHHHHHHhCCCCc-----CEEEEeCCcHHHHHHHHHHHHHh------
Confidence 346888888877765421111 11 23334466677777764221 13789999999999999999863
Q ss_pred hcCCCCCCcEEEEcCC-CchHHHHHHHhcC------------ceeEEEeccCC---ccc-cC-------HHHHHHHhh--
Q 014163 147 EQGKPYDKPNIVTGAN-VQVCWEKFARYFE------------VELKEVKLEEG---YYV-MN-------PVKAVELVD-- 200 (429)
Q Consensus 147 ~~g~~~~~~~vi~~~~-~h~s~~~~~~~~G------------~~v~~v~~~~~---~~~-~d-------~~~l~~~i~-- 200 (429)
. ++..|+.-.. .|....-+....| -.+..++.... .+. -| .+.+++.+.
T Consensus 704 -t----Gr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~ 778 (1013)
T PRK06148 704 -T----GQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAM 778 (1013)
T ss_pred -c----CCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhh
Confidence 1 2345655444 4543222211111 01222221100 011 01 244555554
Q ss_pred ----hCCeEEEEeeCCCccccccC----hHHHHHHHHHhhhccCCCccEEeecccccccccccCCC-Cccc-cCCCCeeE
Q 014163 201 ----ENTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD-LEWD-FRLPLVKS 270 (429)
Q Consensus 201 ----~~~~~v~~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~-~~~~-~~~~~~d~ 270 (429)
+++.+|++--....-|.+-+ ++++.++|++| |+.+|+|+++.|+.- .... +... +++ ..|.
T Consensus 779 ~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~------g~llI~DEVqtGfGR--tG~~~~a~e~~gv-~PDi 849 (1013)
T PRK06148 779 AAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAA------GGVCIADEVQVGFGR--VGSHWWAFETQGV-VPDI 849 (1013)
T ss_pred hccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHh------CCEEEEEecccCCCC--CCCcchhhhhcCC-Ccce
Confidence 23445554444444566655 89999999999 999999999976421 1110 1111 122 3677
Q ss_pred EEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHH
Q 014163 271 INVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGN 350 (429)
Q Consensus 271 ~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~ 350 (429)
+++ -|.++++..+|.++.+++ . .+.+.....+ . . |+.|.+ ....+..++|+.+.++ +..++..++
T Consensus 850 vt~--gK~lggG~Plgav~~~~e-i-~~~~~~g~~~-~---~--Tf~gnp--la~aaa~a~L~~i~~e---~l~~~~~~~ 914 (1013)
T PRK06148 850 VTM--GKPIGNGHPMGAVVTTRE-I-ADSFDNGMEY-F---N--TFGGNP--VSCAIGLAVLDIIEDE---DLQRNALEI 914 (1013)
T ss_pred eee--cccccCCcceEEEEEcHH-H-HhhccCCCcc-c---c--CCCCCH--HHHHHHHHHHHHHhhc---cHHHHHHHH
Confidence 665 476667778888887642 2 1222110001 1 1 111222 3444455566666544 455666777
Q ss_pred HHHHHHHHHhCC-CeEEeeCCC-CceEEEEEecCCC--CCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEe
Q 014163 351 ARALREGLEKTG-RFEILSKDV-GVPLVAFSLKDSS--AHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVIS 424 (429)
Q Consensus 351 ~~~l~~~L~~~~-~~~~~~~~~-~~~~v~f~~~~~~--~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~ 424 (429)
.++|++.|+++- ...++..-. ..-++.+.+..+. .....+++..+.+++.++|+.+.... .....+|+..
T Consensus 915 G~~l~~~L~~l~~~~~~i~~VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g----~~~~vlr~~P 988 (1013)
T PRK06148 915 GNYLLAGLRELQDRFDIIGDVRGMGLFLGIELVTDRKTKAPATAIARYVKNGARERGILIGTEG----PHDNVLKIRP 988 (1013)
T ss_pred HHHHHHHHHHHHHhCCCceEEeeeceEEEEEecCCccccCccHHHHHHHHHHHHhCCeEEeccC----CCCCEEEEeC
Confidence 777777776541 111222111 2334455553211 11123456666677779999875421 1235577764
No 377
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=98.75 E-value=9.6e-07 Score=82.21 Aligned_cols=248 Identities=18% Similarity=0.185 Sum_probs=128.8
Q ss_pred HHHHHHHhhCCCCCCCCCCCceEe---CCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEE-cCCCchHHHHHH----
Q 014163 100 CVNMIAHLFNTPVADDKTAVGVGT---VGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVT-GANVQVCWEKFA---- 171 (429)
Q Consensus 100 ~~~~la~l~g~~~~~~~~~~~~~t---~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~-~~~~h~s~~~~~---- 171 (429)
+-+.+|+.||.+. ..+- .+||+|+.+++...+++ +++++. +..-|-.+....
T Consensus 59 le~iyA~vfgaE~-------ALVRpq~vSGTHAi~~~Lfg~Lrp-------------GD~ll~~tG~PYDTL~~VIG~~g 118 (403)
T PF06838_consen 59 LERIYADVFGAED-------ALVRPQFVSGTHAIALALFGVLRP-------------GDELLSITGKPYDTLEEVIGIRG 118 (403)
T ss_dssp HHHHHHHHCT-SE-------EEEETTS-SHHHHHHHHHHHH--T-------------T-EEEESSSS--CCHHHHHTSSS
T ss_pred HHHHHHHHhCchh-------hhhcccccchHHHHHHHHHhcCCC-------------CCeEEEcCCCchhhHHHHhCCCC
Confidence 3345899999975 2222 27899999999988762 245553 333333444443
Q ss_pred ------HhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCC----ccccccChHHHHHHHHHhhhccCCCccE
Q 014163 172 ------RYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGST----LTGEFEDVKLLHDLLTKKNEETGWDTPI 241 (429)
Q Consensus 172 ------~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~----~tG~~~~l~~I~~la~~~~~~~~~~~~l 241 (429)
+-.|+..+.||+.++ +.+|.+.++++++++|++|.+-=..- ++=.+++++++.+++|+. ++++++
T Consensus 119 ~~~GSL~e~Gi~Y~~v~L~~d-g~~D~~~i~~~~~~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~----~p~~ii 193 (403)
T PF06838_consen 119 NGPGSLKEFGIKYREVPLTED-GTIDWEAIKKALKPNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEI----NPDVII 193 (403)
T ss_dssp SSSSSTGGGT-EEEE--B-TT-SSB-HHHHHHHHHTTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-----TTSEE
T ss_pred CCCCChHHhCceeEEEeecCC-CCcCHHHHHHhhccCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhh----CCCeEE
Confidence 335788999999876 79999999999999999887654332 334557788888888877 338999
Q ss_pred EeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCC--CeEEEEEeCCCCcccccc--cccCCCCCCCCCceec
Q 014163 242 HVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYA--GVGWVVWRTKDDLPDELV--FHINYLGSDQPTFTLN 317 (429)
Q Consensus 242 ~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~--g~g~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 317 (429)
.||.+||.|.- ..+ +.. -++|.+..|.=|..+++. .-|+++-| ++ +.+... ...+=++... ..
T Consensus 194 fVDNCYGEFvE---~~E-P~~---vGADl~aGSLIKNpGGgiAptGGYIaGr-~~-lVe~~a~RLTaPGiG~e~-G~--- 260 (403)
T PF06838_consen 194 FVDNCYGEFVE---TQE-PTE---VGADLMAGSLIKNPGGGIAPTGGYIAGR-KD-LVERAAYRLTAPGIGKEV-GA--- 260 (403)
T ss_dssp EEE-TTTTTTS---SS--GGG---GT-SEEEEETTSGGGTTT-SS-EEEEES-HH-HHHHHHHHHS-TTTGGGS-S----
T ss_pred EEeCCcceecc---ccC-ccc---cchhheeccceeCCCCCccCcCCEEech-HH-HHHHHHhhhcCCcccccc-cc---
Confidence 99999998642 111 112 279999999999755432 22666544 32 323221 1222222111 11
Q ss_pred cCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC--Cce-EEEEEecCCCCCCHHHHHHH
Q 014163 318 FSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDV--GVP-LVAFSLKDSSAHTVFEISEG 394 (429)
Q Consensus 318 ~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~--~~~-~v~f~~~~~~~~~~~~~~~~ 394 (429)
|....+.+ +..| ---...+.+..+-+......+++++ +++...+. +.- +-++.+.. ......+++.
T Consensus 261 -t~~~~R~~--~QGl-----FlAP~vV~eAlKgaif~A~~fe~lG-~~v~P~~~~~R~DiIQai~l~~--~e~l~~FC~~ 329 (403)
T PF06838_consen 261 -TLGTNRLM--FQGL-----FLAPHVVGEALKGAIFAAALFEKLG-FEVSPKPDDPRSDIIQAIELGS--PEKLIAFCQG 329 (403)
T ss_dssp --TTTHHHH--HHHH-----HHHHHHHHHHHHHHHHHHHHHHHTT--EEES-TTS--SSS-EEEE-SS--HHHHHHHHHH
T ss_pred -CcchHHHH--HhHH-----hhchHHHHHHHHHHHHHHHHHHHcC-CcCCCCCCCCCCceEEEEECCC--HHHHHHHHHH
Confidence 11111111 1111 0013344555555666666667776 88775432 333 44666643 2344455666
Q ss_pred HH
Q 014163 395 LR 396 (429)
Q Consensus 395 L~ 396 (429)
++
T Consensus 330 iQ 331 (403)
T PF06838_consen 330 IQ 331 (403)
T ss_dssp HH
T ss_pred HH
Confidence 65
No 378
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=98.75 E-value=7.7e-07 Score=80.31 Aligned_cols=282 Identities=12% Similarity=0.064 Sum_probs=174.7
Q ss_pred HHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEE----cCCCchHHHHHHHhc
Q 014163 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVT----GANVQVCWEKFARYF 174 (429)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~----~~~~h~s~~~~~~~~ 174 (429)
-+...++.+.|...+. +.+.++-|.-++..+...-.+...+ -.|+. .+..||+++.-+++.
T Consensus 115 ~il~l~~~iVGA~e~E-----vavmNsLTvNlh~Ll~sFyKPTekR----------~KILlE~kaFPSDhYAiesQ~~lh 179 (465)
T KOG3846|consen 115 PILPLLAPIVGAQENE-----VAVMNSLTVNLHSLLISFYKPTEKR----------FKILLEKKAFPSDHYAIESQCKLH 179 (465)
T ss_pred hhhhhhhhhccCCchh-----hhhHhhhhhHHHHHHHHhcCCcchh----------hhhhhccCCCCchHHHHHhhhhhc
Confidence 5666789999997632 3333333333333333332211111 13443 345788899999999
Q ss_pred Ccee----EEEeccCCccccCHHHHHHHhhhCC---eEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeeccc
Q 014163 175 EVEL----KEVKLEEGYYVMNPVKAVELVDENT---ICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAAS 247 (429)
Q Consensus 175 G~~v----~~v~~~~~~~~~d~~~l~~~i~~~~---~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~ 247 (429)
|+.+ +-+...++...+..+++.+.|+.+- .+|+++....+||..-++.+|...-+.. |+++=.|-||
T Consensus 180 G~~~e~sm~~iePREGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~k------gc~VGfDLAH 253 (465)
T KOG3846|consen 180 GISPENSMIQIEPREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIGAITFAGQFK------GCLVGFDLAH 253 (465)
T ss_pred CCChHHheEEecccccccchhHHHHHHHHHhcCCeEEEEEeecceeecccccchhhhhhcccCC------CcEechhhhh
Confidence 9874 3344444444677888888887653 4566777788999999999999655555 9999999999
Q ss_pred ccccccccCCCCccccCCCCeeEEEEcCcccCCCCCC-eEEEEEeCCCCcccccccccCCCCCCCC-Cc----------e
Q 014163 248 GGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAG-VGWVVWRTKDDLPDELVFHINYLGSDQP-TF----------T 315 (429)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g-~g~l~~~~~~~~~~~~~~~~~~~~~~~~-~~----------~ 315 (429)
+.+-.++ .+...++|+.++.+.|++.++.| +|.+.+-.+ ...........|.+.... .+ +
T Consensus 254 AvgNVpL-------~LHdWgVDFACWCSYKYlnaGaGgIgGlFvHek-h~~~~~prl~GWwgh~~s~RF~Mdnvl~lipG 325 (465)
T KOG3846|consen 254 AVGNVPL-------QLHDWGVDFACWCSYKYLNAGAGGIGGLFVHEK-HTKESLPRLAGWWGHDPSKRFQMDNVLELIPG 325 (465)
T ss_pred hhcCCce-------EEeecCCceEEEeeecccccCCCccceeeeehh-hhcchhhHHhhhccCCcchhhhhccccccCcc
Confidence 7643332 22224799999999999988776 455555332 333333344555554311 00 0
Q ss_pred ec----cCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCC-----------eEEeeCCC---CceEEE
Q 014163 316 LN----FSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGR-----------FEILSKDV---GVPLVA 377 (429)
Q Consensus 316 ~~----~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~-----------~~~~~~~~---~~~~v~ 377 (429)
-. ..++.....++..+|+.+.+-.+++..++..-+..|+...++..-+ +.++.|.. +.--.+
T Consensus 326 a~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLs 405 (465)
T KOG3846|consen 326 ALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLS 405 (465)
T ss_pred ccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEE
Confidence 01 2234455677888888888888899999998888888887775432 22333321 222333
Q ss_pred EEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEE
Q 014163 378 FSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVI 423 (429)
Q Consensus 378 f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~ 423 (429)
+.+.. ....+.+.|. .+|.++.. ...+.+|+.
T Consensus 406 l~Fss----p~~~vfqeL~----krGv~~Dk------R~PNvIRvA 437 (465)
T KOG3846|consen 406 LYFSS----PTPKVFQELH----KRGVIGDK------RRPNVIRVA 437 (465)
T ss_pred EEeCC----CchHHHHHHH----HcCeeccc------cCCCceEee
Confidence 33322 2357888888 89988653 344558875
No 379
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.74 E-value=7.1e-06 Score=74.97 Aligned_cols=274 Identities=14% Similarity=0.090 Sum_probs=145.9
Q ss_pred HHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCC-Cch------------
Q 014163 99 RCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGAN-VQV------------ 165 (429)
Q Consensus 99 ~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~-~h~------------ 165 (429)
+..+.+.++||.+. ..-++.|.||+..++..+|.-... .++.+..+..|+.... .|.
T Consensus 105 ~f~~~vt~lf~~~k-------vlpmnTGaEa~Eta~KLaR~wgy~---~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ 174 (427)
T KOG1402|consen 105 EFAEYVTKLFGYDK-------VLPMNTGAEAVETACKLARKWGYR---KKNIPKNKAKILSAENNFHGRTLGAISLSTDP 174 (427)
T ss_pred HHHHHHHHhcCcce-------eeecccchhHHHHHHHHHHHHHHh---hccCCccceeEEEecccccCceeeeEEecCCc
Confidence 44566899999975 666777899999999988753221 1222212223433322 332
Q ss_pred -HHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCC-eEEEEeeCCCccccccC----hHHHHHHHHHhhhccCCCc
Q 014163 166 -CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENT-ICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDT 239 (429)
Q Consensus 166 -s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~-~~v~~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~ 239 (429)
+|.+.--.+-..+..||. -|.++|+.++++.- .++++---.-..|.+-| +++..++|++| ++
T Consensus 175 ds~~~fgp~~P~~~~~v~Y------~d~eale~~l~~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtky------nv 242 (427)
T KOG1402|consen 175 DSWDGFGPFLPGVVDKVPY------GDAEALEVALKSPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKY------NV 242 (427)
T ss_pred chhhccCCCCCCcceeecc------CCHHHHHHHhcCCCeeEEEeeccccccceEeCCchhHHHHHHHHHhh------cE
Confidence 122111111111333432 26889999998754 33333333445666622 89999999999 99
Q ss_pred cEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCC-CCCeEEEEEeCCCCcccccccccCCCCCCCCCceecc
Q 014163 240 PIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLV-YAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNF 318 (429)
Q Consensus 240 ~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~-p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (429)
+++.|++|.|..- ...-+..+..--..|.+.+. |.+.+ -+.++.++..++ .. . .+-.+.. |
T Consensus 243 l~I~DEvQTGl~R--TGk~la~d~env~PDivilg--KalSGG~~Pvsavl~~~~-im-~------~~~pgeH------g 304 (427)
T KOG1402|consen 243 LLIADEVQTGLAR--TGKLLACDYENVRPDIVILG--KALSGGVYPVSAVLADDD-IM-L------NIKPGEH------G 304 (427)
T ss_pred EEEehhhhhcccc--cCcEEEeehhhcCCCeEEEe--ccccCCeeeeEEEEecHH-HH-h------ccCCCcc------c
Confidence 9999999976321 11111112211124554432 54433 334455554332 21 1 1111110 1
Q ss_pred CCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEE---eeCC-CCceEEEEEec--CCCCCCHHHHH
Q 014163 319 SKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTGRFEI---LSKD-VGVPLVAFSLK--DSSAHTVFEIS 392 (429)
Q Consensus 319 tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~---~~~~-~~~~~v~f~~~--~~~~~~~~~~~ 392 (429)
+-.+...++...++..+.-.--++..++...+...|+.+|.+++ -++ +... .+.-+..+.+. +..+.+..+++
T Consensus 305 sTyggNpLg~~vaiAalevi~eekL~era~~lG~~l~~~L~~l~-~~~p~~v~~VRGrGl~~ai~i~~~~~~~~~aw~~c 383 (427)
T KOG1402|consen 305 STYGGNPLGCAVAIAALEVIVEEKLVERAAKLGEILRDQLNKLQ-KKFPHVVKEVRGRGLLNAIVINPSKTSGQDAWDVC 383 (427)
T ss_pred cccCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccccchhheeeccceEEEEEeccccccchhHHHHH
Confidence 11122333333344333333336788899999999999999886 222 2211 12333334333 23346777778
Q ss_pred HHHHHHHhccCceecccCCCCCCCceEEEEE
Q 014163 393 EGLRKKLNRFQVVYPQKLPMSYPWSTKLRVI 423 (429)
Q Consensus 393 ~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~ 423 (429)
-.|. ++|....+ .|...+|++
T Consensus 384 l~lk----~~g~LAkp------tH~~IiRfa 404 (427)
T KOG1402|consen 384 LALK----ENGLLAKP------THGNIIRFA 404 (427)
T ss_pred Hccc----ccccccCC------CCCCeEEec
Confidence 7887 89987543 234468875
No 380
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=98.74 E-value=1.7e-05 Score=79.36 Aligned_cols=327 Identities=10% Similarity=0.039 Sum_probs=161.2
Q ss_pred CCCCCcccccccc----CCChHHHHHHHHHHcCcCCCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchH
Q 014163 53 DGNPRLNLASFVT----TWMEPECDKLVMASINKNYVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSE 128 (429)
Q Consensus 53 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~ 128 (429)
+|+.++.+.++.. ...+|.+.+++.+.+.+...... .....+.+.++.+.|.+++...... .....++++|||
T Consensus 56 dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~q~~~~~~~~~-~~~~~~~~~~lAe~L~~~~p~~~~~--~~~~f~~~SGsE 132 (459)
T PRK06931 56 EGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHT-LDLTTPLKDAFSEYLLSLLPGQGKE--YCLQFTGPSGAD 132 (459)
T ss_pred CCCEEEEcccchhhccCCCCCHHHHHHHHHHHhhhccccc-cccCCHHHHHHHHHHHHhCCCcccc--ceEEEeCCCcHH
Confidence 4555544444422 23568888888777664221111 1122345556777787776432100 011345589999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCC-CchHHHHHHHhcC------------ceeEEEeccCCccc------
Q 014163 129 AIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGAN-VQVCWEKFARYFE------------VELKEVKLEEGYYV------ 189 (429)
Q Consensus 129 a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~-~h~s~~~~~~~~G------------~~v~~v~~~~~~~~------ 189 (429)
|+..|++.++.. . +++.|+.-.. .|....-+....| .++..+|.... ++
T Consensus 133 Ave~AlklAr~~-------t----gr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 200 (459)
T PRK06931 133 AVEAAIKLAKTY-------T----GRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHE-YRCPLGIG 200 (459)
T ss_pred HHHHHHHHHHHh-------c----CCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCcc-ccccccCC
Confidence 999999998763 1 2356665554 4443323322211 12344443210 11
Q ss_pred --cCHHHH----HHHhhh------CCeEEEEeeCCCcccccc----ChHHHHHHHHHhhhccCCCccEEeeccccccccc
Q 014163 190 --MNPVKA----VELVDE------NTICVAAILGSTLTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAP 253 (429)
Q Consensus 190 --~d~~~l----~~~i~~------~~~~v~~~~~~~~tG~~~----~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~ 253 (429)
-+.+.+ ++.+.. +..+|++--.....|.+- =++++.++|++| |+++|+|+++.|+.-
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~------g~LlI~DEV~tGfGR- 273 (459)
T PRK06931 201 GEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKH------GILLIVDEVQAGFAR- 273 (459)
T ss_pred chhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEecchhcCCc-
Confidence 123333 333331 234555433333345442 288999999999 999999999976421
Q ss_pred ccCCCCcc-ccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHH
Q 014163 254 FLYPDLEW-DFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (429)
Q Consensus 254 ~~~~~~~~-~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al 332 (429)
...-+.. .+++ ..|.+++ -|.+.++..+|.++.++. + +.+. ..... .++.|.+ ....+..++|
T Consensus 274 -tG~~~a~~~~gv-~PDivt~--gK~l~gG~Pi~av~~~~~--~-~~~~--~~~~~-----~T~~gnp--la~aaala~L 337 (459)
T PRK06931 274 -TGKMFAFEHAGI-EPDIIVM--SKAVGGGLPLAVLGIKKE--F-DAWQ--PGGHT-----GTFRGNQ--LAMATGLTTL 337 (459)
T ss_pred -CchHHHhhhcCC-CCCEEEe--cccccCCcceeeeeeHHH--H-hhcc--CCCCC-----CCCCCCH--HHHHHHHHHH
Confidence 1110111 1122 3677665 366656667777766532 2 2211 11111 1111222 3344455566
Q ss_pred HHcCHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEeeCC-CCceEEEEEecCCCC-------CC-HHHHHHHHHHHHhcc
Q 014163 333 IRLGFEGYKNIMENCMGNARALREGLEKTG-RFEILSKD-VGVPLVAFSLKDSSA-------HT-VFEISEGLRKKLNRF 402 (429)
Q Consensus 333 ~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~-~~~~~v~f~~~~~~~-------~~-~~~~~~~L~~~l~~~ 402 (429)
+.+.+++ ..++..++.++|.+.|+++- ...++... ....++.+.+..... .. ..++...+.+++.++
T Consensus 338 ~~l~~~~---l~~~~~~~G~~l~~~L~~l~~~~~~i~~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 414 (459)
T PRK06931 338 KILKEEN---LAQNAAERGEWLKAQLAELQKRYPCIGNVRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFEN 414 (459)
T ss_pred HHHHhCC---HHHHHHHHHHHHHHHHHHHHHhCCCeEeEecCceEEEEEEccCcccccccccCCccHHHHHHHHHHHHHC
Confidence 6554443 44556666666666665531 11122221 133455666532110 00 124556666666799
Q ss_pred CceecccCCCCCCCceEEEEEe
Q 014163 403 QVVYPQKLPMSYPWSTKLRVIS 424 (429)
Q Consensus 403 G~~~~~~~~~~~~~~~~lRi~~ 424 (429)
|+.+... . .....+|+..
T Consensus 415 Gvl~~~~---~-~~~~~l~~~P 432 (459)
T PRK06931 415 GLLLERG---G-RNGNVVRLLP 432 (459)
T ss_pred CcEEeec---C-CCCCEEEEEC
Confidence 9987532 1 1124577654
No 381
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=98.73 E-value=3.5e-06 Score=78.60 Aligned_cols=326 Identities=14% Similarity=0.053 Sum_probs=179.5
Q ss_pred CCCCCccccccccC--CChHHHHHHHHHHcCcCCC---CCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCch
Q 014163 53 DGNPRLNLASFVTT--WMEPECDKLVMASINKNYV---DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSS 127 (429)
Q Consensus 53 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t 127 (429)
+|++.+|++++.-- ...+.+.+.+...+...+. .+-.+=++..+--.+-+.+++++|++. .++-+-|-
T Consensus 92 ~G~~~~N~aS~NfL~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~E~-------aivYs~gF 164 (467)
T KOG1358|consen 92 DGKDVLNFASANFLGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGTED-------AIVYSYGF 164 (467)
T ss_pred cCceeecccchhhhhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhhCCcc-------eeeecccc
Confidence 66777666554332 2234555555555443211 111111222222233345899999986 33444444
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCC----
Q 014163 128 EAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENT---- 203 (429)
Q Consensus 128 ~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~---- 203 (429)
.++..++.+...+ ++.+++.+..+..+.+..+..--.+.+.. ..|.+.|+..+.+.+
T Consensus 165 ~ti~S~ipafsKr-------------GDIi~~de~~nfaIq~GlqlSRS~i~~Fk------hndm~~lerll~E~~~~~~ 225 (467)
T KOG1358|consen 165 STIESAIPAFSKR-------------GDIIFVDEAVNFAIQKGLQLSRSTISYFK------HNDMEDLERLLPEQEDEDQ 225 (467)
T ss_pred chhhhcchhhhcc-------------CcEEEEehhhhHHHHHHHhhhhheeEEec------CCCHHHHHHhccCcchhhh
Confidence 4455566666542 36788888899988887766554555553 245667766665432
Q ss_pred ---------eEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcccc--CCCCeeEEE
Q 014163 204 ---------ICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF--RLPLVKSIN 272 (429)
Q Consensus 204 ---------~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~--~~~~~d~~~ 272 (429)
+.|++-.--.++|.+.|+.+|.++..|| ...+++|+.++.+.+.-..-.....+ .+..+|.++
T Consensus 226 K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Ky------k~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~ 299 (467)
T KOG1358|consen 226 KNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKY------KFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVT 299 (467)
T ss_pred hccccccceEEEEEEeeccCCCcccccHHHHHHHhhh------eEEEEEecccccccccccCccccccCCCCccceeeee
Confidence 3455555567899999999999999999 99999999987654422111111122 345689888
Q ss_pred EcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCch--hHHHHHHHHHHHcCHHHHHHHHHHHHHH
Q 014163 273 VSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGS--SQIIAQYYQFIRLGFEGYKNIMENCMGN 350 (429)
Q Consensus 273 ~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~--~~~~~~~~al~~l~~~g~~~~~~~~~~~ 350 (429)
.+..-.+... .|+ ++.+. .... .+-+.+. .+..|+.. ....+...++..+.++ .++++..+..
T Consensus 300 ~sm~~alas~--GgF-c~G~~-~i~~-----hQrLSg~----~Y~fSAslPp~la~aa~~ai~i~~~~--p~~~~~L~~k 364 (467)
T KOG1358|consen 300 ASMETALASG--GGF-CAGKS-FIAD-----HQRLSGS----GYCFSASLPPYLAGAAIKAILIEEWN--PEIVQPLRAK 364 (467)
T ss_pred eccccccccc--Cce-eecce-eeEe-----eeecccc----ceeeeccCchhhhhhHHHHHHHHhhC--cchhhhhhcc
Confidence 8776654332 233 33221 1111 0111111 11123322 2222333333333332 4567777778
Q ss_pred HHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCC--CCHHHHHHHHHHHHhccCceeccc----CCCCCCCceEEEEEe
Q 014163 351 ARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSA--HTVFEISEGLRKKLNRFQVVYPQK----LPMSYPWSTKLRVIS 424 (429)
Q Consensus 351 ~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~--~~~~~~~~~L~~~l~~~G~~~~~~----~~~~~~~~~~lRi~~ 424 (429)
...+.+.|+...++.+.+.+ ..+++.+.+.++.+ .+-..+-+.+.++...+|+.+... ..-.++-..-||||+
T Consensus 365 ~~~~H~~l~~~s~~~v~~~~-~SPi~hl~l~~~~~s~e~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~~ 443 (467)
T KOG1358|consen 365 VAKFHAALSSNSGFIVSGSP-ESPIIHLQLERSYGSREKEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRICV 443 (467)
T ss_pred ccccchhhhcCCceEEecCc-CCceeeeeecccccchHHHHHHHHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEEE
Confidence 88888999887778888776 67888887765321 122233344444433447665432 111123345699998
Q ss_pred cc
Q 014163 425 HL 426 (429)
Q Consensus 425 ~~ 426 (429)
..
T Consensus 444 ~a 445 (467)
T KOG1358|consen 444 SA 445 (467)
T ss_pred eC
Confidence 54
No 382
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=98.72 E-value=2e-05 Score=78.63 Aligned_cols=312 Identities=12% Similarity=-0.003 Sum_probs=151.3
Q ss_pred CChHHHHHHHHHH-cCcC---CCCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMAS-INKN---YVDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQ 142 (429)
Q Consensus 67 ~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~ 142 (429)
..+|.+.+++.+. .... ...+ ..+...++.+.+.+.+.+++.-+. ....++++|+||+..|++.++..+.
T Consensus 74 h~~p~i~~Ai~~q~~~~~l~~~~~~-~~~~~~~la~~l~~~l~~~~p~~~-----~~v~f~~SGsEAvE~AlKlAr~~~~ 147 (464)
T TIGR00699 74 YNNPALLKAAQSPEMATTLINRPAL-GNFPSKDWAKILKEGILKVAPKGQ-----DQVWTGMSGSDANELAFKAAFMYYR 147 (464)
T ss_pred CCCHHHHHHHHHHHHHHhhcccccC-CcHHHHHHHHHHHHhHHhhCCCCc-----CEEEEeCCcHHHHHHHHHHHHHHHH
Confidence 3467777777653 1211 1111 222333444444443445543111 1388999999999999999976432
Q ss_pred HHHHh-----cCCC---------CC--CcEEEEcCC-CchHHHHHHHhcCce-----------eEEEeccCCc-------
Q 014163 143 QKRKE-----QGKP---------YD--KPNIVTGAN-VQVCWEKFARYFEVE-----------LKEVKLEEGY------- 187 (429)
Q Consensus 143 ~~~~~-----~g~~---------~~--~~~vi~~~~-~h~s~~~~~~~~G~~-----------v~~v~~~~~~------- 187 (429)
...+. .|++ .+ +..|+.... .|....-+....|-. +..+|.....
T Consensus 148 ~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~ 227 (464)
T TIGR00699 148 SKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHV 227 (464)
T ss_pred hcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCceecCCCCccccccccc
Confidence 11000 0000 01 125665554 454433333322211 1222221000
Q ss_pred ------cccCHHHHHHHhhh---CCeEEEEeeCCCccccccC----hHHHHHHHHHhhhccCCCccEEeecccccccccc
Q 014163 188 ------YVMNPVKAVELVDE---NTICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPF 254 (429)
Q Consensus 188 ------~~~d~~~l~~~i~~---~~~~v~~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~ 254 (429)
..-+++.+++++.+ +..+|++--.....|.+-+ +++|.++|++| |+++++|+++.|+..
T Consensus 228 ~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~------g~lLI~DEV~tGfGr-- 299 (464)
T TIGR00699 228 KENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKH------NVAFIVDEVQTGVGA-- 299 (464)
T ss_pred ccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEeeeeeCCCC--
Confidence 01245677787753 3455655555555577776 99999999999 999999999976421
Q ss_pred cCCCCcc-ccCCC-CeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHH
Q 014163 255 LYPDLEW-DFRLP-LVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQF 332 (429)
Q Consensus 255 ~~~~~~~-~~~~~-~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al 332 (429)
...-+.. .+++. ..|.+++ -|.+.+ .|+++. .+ .+.. ....+..+ + +.+.+ ....+..++|
T Consensus 300 tG~~fa~e~~gv~~~PDi~t~--gK~lg~---gG~~~~-~~-~~~~---~~~~~~~~---T--~~gnp--~~~aaa~a~L 362 (464)
T TIGR00699 300 TGKFWAHEHWNLDDPPDMVTF--SKKFQT---AGYFFH-DP-AFRP---NKPYRQFN---T--WMGDP--SRALILREII 362 (464)
T ss_pred CcchhHHHhcCCCCCCCEEEe--hhhhcc---CCcccc-ch-hccC---CCCccccc---C--CCCCH--HHHHHHHHHH
Confidence 1111111 11222 3677664 354421 133322 21 1100 00011111 1 11111 3344455566
Q ss_pred HHcCHHHHHHHHHHHHHHHHHHHHHHHhC----C-CeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceec
Q 014163 333 IRLGFEGYKNIMENCMGNARALREGLEKT----G-RFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYP 407 (429)
Q Consensus 333 ~~l~~~g~~~~~~~~~~~~~~l~~~L~~~----~-~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~ 407 (429)
+.+.++ +..++..++.++|.+.|+++ | .+.-+.......++.+.+.. ...+..+.+.+.++|+.+.
T Consensus 363 ~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~------~~~~~~i~~~~~~~Gvl~~ 433 (464)
T TIGR00699 363 QEIKRK---DLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPD------EAKRDKLLKKARNNGVNIG 433 (464)
T ss_pred HHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCC------HHHHHHHHHHHHHCCcEEe
Confidence 665443 34455666666666666553 3 12222100144566666532 1234455555559999875
Q ss_pred ccCCCCCCCceEEEEEe
Q 014163 408 QKLPMSYPWSTKLRVIS 424 (429)
Q Consensus 408 ~~~~~~~~~~~~lRi~~ 424 (429)
.. +...||++.
T Consensus 434 ~~------g~~~ir~~P 444 (464)
T TIGR00699 434 GC------GVKAIRLRP 444 (464)
T ss_pred cC------CCCeEEEeC
Confidence 31 335688875
No 383
>PRK08297 L-lysine aminotransferase; Provisional
Probab=98.72 E-value=6e-06 Score=82.32 Aligned_cols=317 Identities=12% Similarity=0.007 Sum_probs=147.0
Q ss_pred CChHHHHH--HHHHHcCcCCC-CCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDK--LVMASINKNYV-DMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQ 143 (429)
Q Consensus 67 ~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~ 143 (429)
..+|.+.+ ++.+.++.-.. .........+...++.+.++++.+ +... ....++++|+||+..|++.++.....
T Consensus 61 h~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~-p~~~---~~v~f~~SGsEAve~AlKlAr~~~~~ 136 (443)
T PRK08297 61 MNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLG-DPEL---PHLFFVDGGALAVENALKVAFDWKSR 136 (443)
T ss_pred CCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcC-CCCC---CEEEEeCchHHHHHHHHHHHHHHhhc
Confidence 34577776 66655543110 000000111223345555666652 1111 23889999999999999999764211
Q ss_pred HHHhcCCC-CCCcEEEEcCC-CchHHHHHHHhcCcee-----------EEEeccC------C-c-------cccCHHHHH
Q 014163 144 KRKEQGKP-YDKPNIVTGAN-VQVCWEKFARYFEVEL-----------KEVKLEE------G-Y-------YVMNPVKAV 196 (429)
Q Consensus 144 ~~~~~g~~-~~~~~vi~~~~-~h~s~~~~~~~~G~~v-----------~~v~~~~------~-~-------~~~d~~~l~ 196 (429)
++...|.+ .++.+|+.-.. .|....-+....|... ..+|... + + ..-++++++
T Consensus 137 ~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (443)
T PRK08297 137 KNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQAR 216 (443)
T ss_pred cccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHH
Confidence 10001210 11345665444 4543333332222110 0111100 0 0 001345666
Q ss_pred HHhhh---CCeEEEEeeCCCccccc----cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcc-ccCCCCe
Q 014163 197 ELVDE---NTICVAAILGSTLTGEF----EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEW-DFRLPLV 268 (429)
Q Consensus 197 ~~i~~---~~~~v~~~~~~~~tG~~----~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~-~~~~~~~ 268 (429)
+.+.. ++.+|++--.....|.+ .-+++|.++|++| |+++++|+++.|+.- ...-+.. .+++ ..
T Consensus 217 ~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~------g~llI~DEV~tGfGR--tG~~~a~~~~gv-~P 287 (443)
T PRK08297 217 AAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEH------DALLIFDEVQTGVGL--TGTAWAYQQLGV-RP 287 (443)
T ss_pred HHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc------CCEEEEechhhccCc--cchHHHHHhcCC-CC
Confidence 77753 34555554444444554 5689999999999 999999999976421 1100000 1122 36
Q ss_pred eEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHH
Q 014163 269 KSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCM 348 (429)
Q Consensus 269 d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~ 348 (429)
|.+++ -|.+ | .|.++++++ +..... ..+.....-..++.+.+ ....+..++++.+.++ +..++..
T Consensus 288 Div~~--gK~l--~--~~a~l~~~~--i~~~~~--~~~~~~~~~~~T~~gnp--l~~aaa~a~L~~l~~~---~l~~~~~ 352 (443)
T PRK08297 288 DIVAF--GKKT--Q--VCGIMAGRR--VDEVED--NVFAVSSRINSTWGGNL--VDMVRARRILEVIEED---GLVENAA 352 (443)
T ss_pred CEEEe--cccc--c--ccceecchH--HHHhhh--hhccCccccCCCCCccH--HHHHHHHHHHHHHHhc---CHHHHHH
Confidence 77764 3544 2 233333332 100000 00000000001111222 2334444555555443 4556666
Q ss_pred HHHHHHHHHHHhC----CCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEEe
Q 014163 349 GNARALREGLEKT----GRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVIS 424 (429)
Q Consensus 349 ~~~~~l~~~L~~~----~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~ 424 (429)
++.+++.+.|+++ +.+..-... ...++.+.+.+. +....+.+++.++|+.+... +...+|++.
T Consensus 353 ~~g~~l~~~L~~l~~~~~~~~~~vrg-~G~~~~i~~~~~------~~~~~~~~~l~~~Gvl~~~~------~~~~lr~~P 419 (443)
T PRK08297 353 RQGEYLLARLEELAAEFPAVVSNVRG-RGLMCAFDLPTT------ADRDEVIRRLWEEGVLVLPC------GERSIRFRP 419 (443)
T ss_pred HHHHHHHHHHHHHHHHCCCcceeeec-cceEEEEEecCH------HHHHHHHHHHHHCCEEEecC------CCCeEEEEC
Confidence 7777777777653 322101111 345566666421 23344444555999887531 224578753
No 384
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=98.52 E-value=3.6e-07 Score=80.70 Aligned_cols=234 Identities=14% Similarity=0.084 Sum_probs=145.1
Q ss_pred HHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHh
Q 014163 94 TELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARY 173 (429)
Q Consensus 94 ~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~ 173 (429)
..+-.++....-.+.|+..-. ...++.....+++.+++...+.+.. +-.-|+......-|-.+..-.
T Consensus 56 ~~isne~a~~~i~l~glhav~---nc~vvpl~tgmslslc~~s~r~krp----------kakyiiw~ridqks~~ksi~~ 122 (432)
T KOG3843|consen 56 ACISNEFAKDAIHLAGLHAVA---NCFVVPLATGMSLSLCFLSLRHKRP----------KAKYIIWLRIDQKSCFKSIIH 122 (432)
T ss_pred HHHHHHHHHHHHHHhhhhhhh---ceeEEeccccccHHHHHHHHhhcCC----------cccEEEEEecchHHHHHHHHh
Confidence 344445555566677765310 1222333334556667776665311 012578888888877777778
Q ss_pred cCceeEEEec--cCCccccCHHHHHHHhhhC-CeEEEEeeCCCccc---cccChHHHHHHHHHhhhccCCCccEEeeccc
Q 014163 174 FEVELKEVKL--EEGYYVMNPVKAVELVDEN-TICVAAILGSTLTG---EFEDVKLLHDLLTKKNEETGWDTPIHVDAAS 247 (429)
Q Consensus 174 ~G~~v~~v~~--~~~~~~~d~~~l~~~i~~~-~~~v~~~~~~~~tG---~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~ 247 (429)
.|++++.|.. +.+....|++.+++.+++. +..|...+.+|..- ..|.+++|+.+|..| +++-+|..||
T Consensus 123 agfepiiie~i~d~d~l~tdleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~------diphivnnay 196 (432)
T KOG3843|consen 123 AGFEPIIIENILDGDELITDLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAH------DIPHIVNNAY 196 (432)
T ss_pred cCCCceeeeccccchHHHHhHHHHHHHHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHcc------Cchhhhcccc
Confidence 8999887753 3344677999999999874 45555556665543 348999999999999 9999999999
Q ss_pred ccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHH
Q 014163 248 GGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIA 327 (429)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~ 327 (429)
|.....-.. ....--...++|.++-|..|.++.|.|..++...++..+.. ....|.+.. +....+-
T Consensus 197 glqsee~i~-~iaa~~~~grida~vqsldknf~vpvggaiia~fk~n~iq~---iak~ypgra----------sa~ps~d 262 (432)
T KOG3843|consen 197 GLQSEECIH-KIAAAAECGRIDAFVQSLDKNFMVPVGGAIIAAFKDNFIQE---IAKMYPGRA----------SASPSLD 262 (432)
T ss_pred ccchHHHHH-HHHHHhhhccHHHHHHHhhhcceeecchhHhhHhHHHHHHH---HHHhCCCcc----------ccCccHH
Confidence 853210000 00000123478999999999999999876654433222211 123344332 2233445
Q ss_pred HHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHh
Q 014163 328 QYYQFIRLGFEGYKNIMENCMGNARALREGLEK 360 (429)
Q Consensus 328 ~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~ 360 (429)
+...|..+|+.++.+...+..++--+++.++.+
T Consensus 263 llitll~~gqn~f~e~~~eqkemf~~l~~ki~~ 295 (432)
T KOG3843|consen 263 LLITLLSLGQNAFKELFGEQKEMFLKLRNKIIK 295 (432)
T ss_pred HHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 556677788888888887777766666666554
No 385
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=98.42 E-value=3.8e-05 Score=71.96 Aligned_cols=310 Identities=13% Similarity=0.018 Sum_probs=157.7
Q ss_pred CChHHHHHHHHHHcCcCCCCCc--cChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMD--EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQK 144 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~ 144 (429)
..+|.+.+++.+-+..=++... ..+-..++ .+.|.+.+=-+- ....|+++|||||.++++.++..+.
T Consensus 66 HchP~v~~a~~kQl~~l~H~t~~~~~~pi~~~----Ae~L~s~~P~~l-----~~vfF~nsGsEANelal~mar~Yt~-- 134 (442)
T KOG1404|consen 66 HCHPDVVAAAVKQLKKLYHTTSGYLNPPIHDL----AEALVSKLPGDL-----KVVFFVNSGSEANELALKMARLYTG-- 134 (442)
T ss_pred CCChHHHHHHHHhhhhhEEeeccccCCcHHHH----HHHHHHhCCCCc-----eEEEEecCCchHHHHHHHHHHHhcC--
Confidence 3457766666554432222111 12333333 333555442222 2389999999999999999987531
Q ss_pred HHhcCCCCCCcEEE-EcCCCchHHHHHHHhcCceeEEEeccC-----------C----cc-----ccCH----HHHHHHh
Q 014163 145 RKEQGKPYDKPNIV-TGANVQVCWEKFARYFEVELKEVKLEE-----------G----YY-----VMNP----VKAVELV 199 (429)
Q Consensus 145 ~~~~g~~~~~~~vi-~~~~~h~s~~~~~~~~G~~v~~v~~~~-----------~----~~-----~~d~----~~l~~~i 199 (429)
.-++| .....|.+...++...|.....-+.+. + -+ .-.. +++++.+
T Consensus 135 ---------~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~~d~~a~~l~d~i 205 (442)
T KOG1404|consen 135 ---------NLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEASDRYAKELEDLI 205 (442)
T ss_pred ---------CceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhhHHHHHHHHHHHH
Confidence 12454 455566665555555555433322110 0 00 0012 3344444
Q ss_pred hhC---C-eEEEEeeCCCccccccC----hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEE
Q 014163 200 DEN---T-ICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSI 271 (429)
Q Consensus 200 ~~~---~-~~v~~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~ 271 (429)
... + .+.++-...-.-|.+.+ +++..++|+++ |..++.|+++.|+.- ...-|.+.-.---.|.+
T Consensus 206 ~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~------Ggl~IaDEVqtGfGR--tG~~wgfe~h~v~PDIv 277 (442)
T KOG1404|consen 206 LYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKR------GGLFIADEVQTGFGR--TGHMWGFESHGVVPDIV 277 (442)
T ss_pred HhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHc------CCEEEehhhhhcccc--ccccccccccCCCccHH
Confidence 322 2 23333333334466643 78999999999 999999999977532 11111111000012332
Q ss_pred EEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHHHHHHHHHHHHHH
Q 014163 272 NVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNIMENCMGNA 351 (429)
Q Consensus 272 ~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~ 351 (429)
+ .-|.++.+...|.+++.. + +.+.+.....+.. ++ +..+. ......++|+.+.+ +++.++..+..
T Consensus 278 T--mAKgiGnG~Pl~AVvtt~-E-Ia~v~~~~~~~fn------Ty-ggnP~-a~avg~aVL~Vike---e~LqE~aa~vG 342 (442)
T KOG1404|consen 278 T--MAKGIGNGFPLGAVVTTP-E-IADVLNQKSSHFN------TY-GGNPV-ACAVGLAVLKVIKE---ENLQENAAEVG 342 (442)
T ss_pred H--HHhhccCCCcceeeecCH-H-HHHHHHhcccccc------cc-CCCch-hHHHHHHHHHHHHH---HhHHHHHHHHH
Confidence 2 338777778888877653 2 2232222221211 11 22222 22223344444443 56777788899
Q ss_pred HHHHHHHHhCC-CeEEeeCCCCce-EEEEEecCCC---CCCHHHHHHHHHHHHhccCceecccCCCCCCCceEEEEE
Q 014163 352 RALREGLEKTG-RFEILSKDVGVP-LVAFSLKDSS---AHTVFEISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVI 423 (429)
Q Consensus 352 ~~l~~~L~~~~-~~~~~~~~~~~~-~v~f~~~~~~---~~~~~~~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~ 423 (429)
.||.+.|.++. ..+++++-...+ ++-+.+.... .--.......+.+.+.+.|+.|-.. ...|. .+||+
T Consensus 343 ~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g---~i~G~-vfria 415 (442)
T KOG1404|consen 343 SYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKG---GIHGN-VFRIA 415 (442)
T ss_pred HHHHHHHHHHhhcCCceeecccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCeeeecc---cccce-EEEec
Confidence 99999998764 256666542222 3333332211 0122344445555555999988432 12222 68875
No 386
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.38 E-value=0.00021 Score=67.51 Aligned_cols=278 Identities=13% Similarity=-0.027 Sum_probs=144.3
Q ss_pred CCCCCcccccccc----CCChHHHHHHHHHHcCcCCCC---CccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCC
Q 014163 53 DGNPRLNLASFVT----TWMEPECDKLVMASINKNYVD---MDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVG 125 (429)
Q Consensus 53 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g 125 (429)
+++.++.+.+.+. ++..|++.+++..-.+.-.+. +...+ ..++++. +.+..+-.. ...+.++++
T Consensus 54 ~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~hs~~~~~t~e-av~l~~~----l~~~~~~~~----~~rvff~ns 124 (433)
T KOG1401|consen 54 DGKEYIDFTSSWAVTILGHANPEVARALAEQAKKLGHSSNGYFTLE-AVELEEV----LSAVLGKGS----AERVFFCNS 124 (433)
T ss_pred CcceeeeeccceeccccCCCCHHHHHHHHHHHhhheeccCccccHH-HHHHHHH----HHhcccCCC----ccEEEEecC
Confidence 3444444444332 234688888877666553322 12222 3333333 334332221 134899999
Q ss_pred chHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEE-cCCCchHHHHHHHhcCceeEEEecc---CC--c-cccCHHHHHHH
Q 014163 126 SSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVT-GANVQVCWEKFARYFEVELKEVKLE---EG--Y-YVMNPVKAVEL 198 (429)
Q Consensus 126 ~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~-~~~~h~s~~~~~~~~G~~v~~v~~~---~~--~-~~~d~~~l~~~ 198 (429)
|||||..|+..++.....+ .+.++-.+|. ....|.-..-++...+.....+|.+ ++ . ---|+.+|++.
T Consensus 125 GTeAne~ALK~Ark~~~~~-----~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~ 199 (433)
T KOG1401|consen 125 GTEANETALKFARKFTGKK-----HPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKL 199 (433)
T ss_pred CcHHHHHHHHHHHHhhccc-----CCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHH
Confidence 9999999999998753221 1111223554 5555654333333333322222211 11 0 12368999999
Q ss_pred hhhCC---eEEEEeeCCCccccc--cC--hHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCcccc-CCCCeeE
Q 014163 199 VDENT---ICVAAILGSTLTGEF--ED--VKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDF-RLPLVKS 270 (429)
Q Consensus 199 i~~~~---~~v~~~~~~~~tG~~--~~--l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~-~~~~~d~ 270 (429)
++... .+|++--..-.-|.+ +| +..|.++|+++ ++++|.|+++-|+.- ..+.+.... + ...|.
T Consensus 200 ~~~h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~------~vl~I~DEV~tG~gR--~g~~~a~e~~~-~~PDI 270 (433)
T KOG1401|consen 200 FESHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDN------GVLLIFDEVQTGLGR--LGYGWAQEYFG-VTPDI 270 (433)
T ss_pred HHhCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhc------CceEEeehhhhCccc--cchHHHHHHhC-cCCcc
Confidence 98865 445444444333443 33 67889999999 999999999976432 222221111 1 12344
Q ss_pred EEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCH-HHHHHHHHHHHH
Q 014163 271 INVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF-EGYKNIMENCMG 349 (429)
Q Consensus 271 ~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~-~g~~~~~~~~~~ 349 (429)
++ .-|.+.++..+|..+++++ .. ..+......+.+ .++.|.+ ....+...++..+.+ +.++..-+....
T Consensus 271 ~t--~aK~L~gGlPigA~~v~~k-V~-~~i~~~~~l~hg----~Tf~gnp--Lacsa~~~~l~~l~~~e~~k~vs~~~k~ 340 (433)
T KOG1401|consen 271 TT--VAKPLGGGLPIGATGVRDK-VA-EMISPGDHLYHG----GTFSGNP--LACSAGIKVLDELKDPETLKNVSKIGKE 340 (433)
T ss_pred ee--ehhhccCCceeEEEeehHH-HH-hhcCCCCccccC----cccCCCh--hhhhHHHHHHHHHcCHHHHHHHHHHHHH
Confidence 44 3488888888898888753 22 222211111111 0111222 122223344555543 444555556666
Q ss_pred HHHHHHHHHHhCCC
Q 014163 350 NARALREGLEKTGR 363 (429)
Q Consensus 350 ~~~~l~~~L~~~~~ 363 (429)
+++.+.+.+.+.+.
T Consensus 341 L~~~l~e~~~~~~~ 354 (433)
T KOG1401|consen 341 LRKLLDEYLKKTPN 354 (433)
T ss_pred HHHHHHHHhccCCC
Confidence 77777777776653
No 387
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=98.31 E-value=0.00028 Score=74.90 Aligned_cols=198 Identities=11% Similarity=0.000 Sum_probs=99.0
Q ss_pred HHHHHHhhh-------CCeEEEEeeC--CCcccccc----ChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCC
Q 014163 193 VKAVELVDE-------NTICVAAILG--STLTGEFE----DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDL 259 (429)
Q Consensus 193 ~~l~~~i~~-------~~~~v~~~~~--~~~tG~~~----~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~ 259 (429)
+.+++.|+. +..+-++.-| ...-|.+- =+++|.++|++| |+++|+|+++.|+.- ....+
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~------gilLI~DEV~TGfGR--tG~~f 638 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSR------KIPVIFDEVFTGLWR--LGVES 638 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHh------CCEEEEeecccCCCc--ccchh
Confidence 556676652 2333333334 23345552 278999999999 999999999987531 11111
Q ss_pred ccc-cCCCCeeEEEEcCcccCCCC-CCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCH
Q 014163 260 EWD-FRLPLVKSINVSGHKYGLVY-AGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGF 337 (429)
Q Consensus 260 ~~~-~~~~~~d~~~~s~hK~~~~p-~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~ 337 (429)
..+ +++ ..|.+++. |.+.++ ..+|.++++++ .. +.+... .......-..++.|.+ ....+..++|+.+.+
T Consensus 639 a~e~~gv-~PDIi~~g--KgLtgG~~Plaa~l~~~~-I~-~~f~~~-~~~~~~~hg~Ty~gnp--l~cAaala~L~~~~~ 710 (817)
T PLN02974 639 AWELLGC-KPDIACYA--KLLTGGLVPLAATLATEE-VF-EAFRGP-SKLDALLHGHSYTAHP--MGCAAAAKALQWYKD 710 (817)
T ss_pred hHHhcCC-CCCEEeec--ccccCCCCccEEEEEcHH-HH-Hhhccc-cccCCcccCCCCCcCH--HHHHHHHHHHHHHHc
Confidence 111 122 25666643 776666 36777777542 21 222100 0000000001111222 344445566666644
Q ss_pred H-HHHHHHHHHHHHHHHHHHHH----HhCCCeEEeeCCCCceEEEEEecCCCCCC--HHHHHHHHHHHHh-ccCceecc
Q 014163 338 E-GYKNIMENCMGNARALREGL----EKTGRFEILSKDVGVPLVAFSLKDSSAHT--VFEISEGLRKKLN-RFQVVYPQ 408 (429)
Q Consensus 338 ~-g~~~~~~~~~~~~~~l~~~L----~~~~~~~~~~~~~~~~~v~f~~~~~~~~~--~~~~~~~L~~~l~-~~G~~~~~ 408 (429)
+ -++...++..++.+++.+.| ++.|.+.-+. ...-+..+.+..+.... ...++..+.+++. ++|+.++.
T Consensus 711 ~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~VR--g~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~ 787 (817)
T PLN02974 711 PSTNPNLIPPGSRLRELWDEELVRAISSLPNVERVV--SLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARP 787 (817)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEEE--eeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEe
Confidence 3 23344455555555555555 4444332221 12345566664321100 2345667777777 89998864
No 388
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=98.14 E-value=0.00014 Score=66.19 Aligned_cols=296 Identities=13% Similarity=0.108 Sum_probs=157.8
Q ss_pred CChHHHHHHHHHHcCcCCCCCccCh--hhHHHHHHHHHHHHHhhCCCCCC--CCCCCceEeCCchHHHHHHHHHHHHHHH
Q 014163 67 WMEPECDKLVMASINKNYVDMDEYP--VTTELQNRCVNMIAHLFNTPVAD--DKTAVGVGTVGSSEAIMLAGLAFKRKWQ 142 (429)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~le~~~~~~la~l~g~~~~~--~~~~~~~~t~g~t~a~~~al~a~~~~~~ 142 (429)
+..|.+.+.=....+.+..+.+.-| +...+...+.+ =++|.+... ++...++-+.+||.|+..+..-+. ++.
T Consensus 48 WvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~A~e---l~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~-~~~ 123 (410)
T KOG1412|consen 48 WVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTKAATE---LLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLA-TFY 123 (410)
T ss_pred eEehhhhhhhhhccCchhccchhccccCchhhhhhhHH---HhcCCCchhhhhccccceeeccccchhhhhHHHHH-Hhc
Confidence 3446666554445454444333222 44444433322 236665432 233567888899999887655443 222
Q ss_pred HHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCce-eEEEec-cCCccccCHHHHHHHhhhCC-eEEE--EeeCCCcccc
Q 014163 143 QKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVE-LKEVKL-EEGYYVMNPVKAVELVDENT-ICVA--AILGSTLTGE 217 (429)
Q Consensus 143 ~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~-v~~v~~-~~~~~~~d~~~l~~~i~~~~-~~v~--~~~~~~~tG~ 217 (429)
.+..|++|.|++.......+..|+. +...+. +.+.-.+|++.+...|+..| ..|+ -.+..||||.
T Consensus 124 ----------~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe~si~iLhaCAhNPTGm 193 (410)
T KOG1412|consen 124 ----------NKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESAPEGSIIILHACAHNPTGM 193 (410)
T ss_pred ----------ccceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCceecHHHHHHHHhhCCCCcEEeeeccccCCCCC
Confidence 1247999999999988888888844 444443 32335799999999988765 2222 3344899995
Q ss_pred c---cChHHHHHHHHHhhhccCCCccEEeecccccccccccC-CCCccccC-CCCe-eEEEEcCcc-cCCCCCCeEEE--
Q 014163 218 F---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLY-PDLEWDFR-LPLV-KSINVSGHK-YGLVYAGVGWV-- 288 (429)
Q Consensus 218 ~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~-~~~~~~~~-~~~~-d~~~~s~hK-~~~~p~g~g~l-- 288 (429)
= +...+|+++.++. +...+.|-||-|+...... +.+...+. ..+. -+++-|.-| +++-..++|-+
T Consensus 194 DPT~EQW~qia~vik~k------~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNfGlYneRvGnltv 267 (410)
T KOG1412|consen 194 DPTREQWKQIADVIKSK------NLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNFGLYNERVGNLTV 267 (410)
T ss_pred CCCHHHHHHHHHHHHhc------CceeeeehhhcccccCCccccHHHHHHHHhcCCeEEEEhhhhhhcccccccccceEE
Confidence 3 5578999999999 9999999999876542111 11211111 1123 345556666 34444455543
Q ss_pred EEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcC---HHHHHHHHHHHHHHHHHHHHHHHhCC--C
Q 014163 289 VWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLG---FEGYKNIMENCMGNARALREGLEKTG--R 363 (429)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~---~~g~~~~~~~~~~~~~~l~~~L~~~~--~ 363 (429)
+++++...........--...+...+. ..++.+.+-...--.+. ...++.+-.|..+++..|++.|..++ |
T Consensus 268 v~~n~a~i~~v~SQl~lviR~~~SNPP----AyGArIV~kvL~tP~lre~W~~sik~MssRI~~MR~aLrd~L~aL~TPG 343 (410)
T KOG1412|consen 268 VVNNPAVIAGVKSQLTLVIRSNWSNPP----AYGARIVHKVLSTPELREQWIQSIKTMSSRIKKMRTALRDHLVALKTPG 343 (410)
T ss_pred EecChhHHHHHHHHHHHHHhhccCCCc----chhhHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 334443321111100000111100000 00112211111111111 12356677888899999999998764 1
Q ss_pred -eEEeeCCCCceEEEEEecCCCCCCHHHHHH
Q 014163 364 -FEILSKDVGVPLVAFSLKDSSAHTVFEISE 393 (429)
Q Consensus 364 -~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~ 393 (429)
+.-+. .+.+.++|. ++++..+-.
T Consensus 344 tWDHI~--~QiGMFSyT-----GLtp~qV~~ 367 (410)
T KOG1412|consen 344 TWDHIT--QQIGMFSYT-----GLTPAQVDH 367 (410)
T ss_pred cHHHHH--hhccceeec-----CCCHHHHHH
Confidence 11111 156777775 344445443
No 389
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.10 E-value=0.00011 Score=66.61 Aligned_cols=151 Identities=14% Similarity=0.085 Sum_probs=100.1
Q ss_pred HHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEE-EcCCCchHHHHH----------
Q 014163 102 NMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIV-TGANVQVCWEKF---------- 170 (429)
Q Consensus 102 ~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi-~~~~~h~s~~~~---------- 170 (429)
+-+|+.||.+... .-.--.+||.|+..++...+++ +++++ +...-+-.+...
T Consensus 72 ~vyA~vf~aE~a~----VRpq~isGTHAI~~aLfg~LRp-------------gDell~i~G~PYDTLeevIG~rg~~~gS 134 (416)
T COG4100 72 RVYAQVFGAEAAL----VRPQIISGTHAIACALFGILRP-------------GDELLYITGSPYDTLEEVIGLRGEGQGS 134 (416)
T ss_pred HHHHHHhccccce----eeeeeecchhHHHHHHHhccCC-------------CCeEEEecCCcchhHHHHhccCCCCccc
Confidence 3489999997521 1122236899998888876652 24543 333223333333
Q ss_pred HHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCC----CccccccChHHHHHHHHHhhhccCCCccEEeecc
Q 014163 171 ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGS----TLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (429)
Q Consensus 171 ~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~----~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a 246 (429)
.+-.|++.+.||+..+ +.+|.+.+++.++++|++|.+.-.. -|+-.+++++++..+.|+. |.++.+.||.+
T Consensus 135 L~dfgi~Y~~v~Lt~~-gkiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~i----npn~ivFVDNC 209 (416)
T COG4100 135 LKDFGIKYKAVPLTAD-GKIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEI----NPNVIVFVDNC 209 (416)
T ss_pred HHHhCcceeecccccC-CcccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhc----CCCEEEEEecc
Confidence 2335777888998865 7999999999999999987654322 2444567777887777776 44999999999
Q ss_pred cccccccccCCCCccccCCCCeeEEEEcCcccCCC
Q 014163 247 SGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLV 281 (429)
Q Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~ 281 (429)
||.|+- ..++ . .-++|.+..|.=|.-++
T Consensus 210 YGEFvE---~~EP-t---~vGaDliAGSLIKNpGG 237 (416)
T COG4100 210 YGEFVE---EKEP-T---HVGADLIAGSLIKNPGG 237 (416)
T ss_pred chhhhh---ccCc-c---ccchhhhccceeeCCCC
Confidence 998653 1111 1 13689999998886433
No 390
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=98.09 E-value=8.4e-05 Score=68.53 Aligned_cols=303 Identities=16% Similarity=0.078 Sum_probs=158.6
Q ss_pred hccCCCCC-ccccccccC------CChHHHHHHHHHHcCcCCC-CCccChhhHHHHHHHHHHHHHhhCCCCCC--CCCCC
Q 014163 50 LMLDGNPR-LNLASFVTT------WMEPECDKLVMASINKNYV-DMDEYPVTTELQNRCVNMIAHLFNTPVAD--DKTAV 119 (429)
Q Consensus 50 ~~~~~~~~-~~~~~~~~~------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~le~~~~~~la~l~g~~~~~--~~~~~ 119 (429)
+..+.+|. +||+.+... .+-|.++++=....+.+.. .|..-.+..++.....+. .+|-.... ++...
T Consensus 46 fk~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF~k~sakL---a~G~~s~~ik~~Ri~ 122 (427)
T KOG1411|consen 46 FKKDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEFNKLSAKL---ALGDNSPVIKEKRIV 122 (427)
T ss_pred HhcCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHHHHHHHHH---hhcCCchhhhcccee
Confidence 34444554 566555432 1235555544333332211 133333666665443222 25554322 11123
Q ss_pred ceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEec-cCCccccCHHHHHHH
Q 014163 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL-EEGYYVMNPVKAVEL 198 (429)
Q Consensus 120 ~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~-~~~~~~~d~~~l~~~ 198 (429)
.+-|.+||.|+..+..-+ .++.+ ...|++|.|++....+.-...|+.+..... ++.+..+|.+.+-+.
T Consensus 123 tvQ~lSGTGaLriga~Fl-~~f~~----------~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t~gld~~g~led 191 (427)
T KOG1411|consen 123 TVQTLSGTGALRVGAEFL-ARFYP----------SRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKTRGLDFKGMLED 191 (427)
T ss_pred EEEeccCcchhhHHHHHH-Hhhcc----------ccceeecCCcccccCccccccCcceeeeeeccccccccchHHHHHH
Confidence 455568888876554433 33321 247999999998877777888999877765 444567898887777
Q ss_pred hhhCC---eEEEEeeCCCccccc---cChHHHHHHHHHhhhccCCCccEEeecccccccccccCCC-Ccc-cc-CCCCee
Q 014163 199 VDENT---ICVAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD-LEW-DF-RLPLVK 269 (429)
Q Consensus 199 i~~~~---~~v~~~~~~~~tG~~---~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~-~~~-~~-~~~~~d 269 (429)
+.+.+ ..+.-.+.+||||.= +..++|.++.++. +..-++|.||-+|.+.-...+ ... .| ....--
T Consensus 192 l~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k------~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~ 265 (427)
T KOG1411|consen 192 LGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEK------NLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEI 265 (427)
T ss_pred HhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhc------cccchhhhhhcccccCCchhhHHHHHHHHHcCCce
Confidence 77643 334445668999864 6688999999999 999999999988754222111 111 11 111223
Q ss_pred EEEEcCcccCC-CCCCeEEE--EEeCCCCcccccccccCCCCCCCCCceeccCCchhHH------HHHHHHHHHcCHHHH
Q 014163 270 SINVSGHKYGL-VYAGVGWV--VWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQI------IAQYYQFIRLGFEGY 340 (429)
Q Consensus 270 ~~~~s~hK~~~-~p~g~g~l--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~------~~~~~al~~l~~~g~ 340 (429)
.++-|.-|.++ -+-++|.+ ++++.+...+.-.............+.+.|.|-...+ ..+|. ..+
T Consensus 266 ~laQSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~-------~ev 338 (427)
T KOG1411|consen 266 LLAQSYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWL-------GEV 338 (427)
T ss_pred EeehhhhhhcchhhhccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchhhhhhccCChHHHHHHH-------HHH
Confidence 34445556432 22234433 3333322111100000001111111112233322111 22221 235
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCeEEeeC--CCCceEEEEEe
Q 014163 341 KNIMENCMGNARALREGLEKTGRFEILSK--DVGVPLVAFSL 380 (429)
Q Consensus 341 ~~~~~~~~~~~~~l~~~L~~~~~~~~~~~--~~~~~~v~f~~ 380 (429)
+.+.++...+++.|.+.|...+- ..-+. ..+.+.+||.-
T Consensus 339 k~MadRi~~mR~~L~d~L~~~gs-~~~W~hI~~QIGMF~fTg 379 (427)
T KOG1411|consen 339 KGMADRIISMRQQLFDALEKEGS-PGNWSHITKQIGMFCFTG 379 (427)
T ss_pred HHHHHhhhhhHHHHhHHhhcCCC-CccHHHHHHhhheeeecC
Confidence 67778889999999999987652 11111 12678888873
No 391
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=97.94 E-value=0.0027 Score=63.44 Aligned_cols=311 Identities=16% Similarity=0.156 Sum_probs=160.9
Q ss_pred CCCCCHHHHHHHHHHhhccCCC-CCccccccccCCChHHH-HHHHHHHcCcCCC-CCccCh-----hhHHHHHHHHHHHH
Q 014163 34 DNSMPKEAAYQVINDELMLDGN-PRLNLASFVTTWMEPEC-DKLVMASINKNYV-DMDEYP-----VTTELQNRCVNMIA 105 (429)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~-----~~~~le~~~~~~la 105 (429)
..+..+++.++++.++...+.- ..|.-.+|.....++.+ +.++. |..|. +|+.++ +--+---....+++
T Consensus 97 ~~~~~E~eml~~l~~ia~kNk~~ksfIGmGYyn~~vP~~I~RNile---np~W~TqYTPYQ~EIsQGRLEsllNyQTmi~ 173 (1001)
T KOG2040|consen 97 DKPLCESEMLQHLEDIASKNKIWKSFIGMGYYNTHVPAVILRNILE---NPGWYTQYTPYQAEISQGRLESLLNYQTMIT 173 (1001)
T ss_pred CCCcCHHHHHHHHHHHHhhhhHHHHhhccccccccCcHHHHHHhhh---CCcceeccCCCchhhhhhhHHHHhhhHHhhh
Confidence 4567889999999887654321 11211122222333432 22221 22232 344443 22222224456788
Q ss_pred HhhCCCCCCCCCCCceEeCCc---hHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHH----HhcCcee
Q 014163 106 HLFNTPVADDKTAVGVGTVGS---SEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFA----RYFEVEL 178 (429)
Q Consensus 106 ~l~g~~~~~~~~~~~~~t~g~---t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~----~~~G~~v 178 (429)
++.|++-.. .....-| .||+.++.+..+ +..+++....|+-....+ .-+|+++
T Consensus 174 dlTGL~~aN-----ASLLDEgTAaaEAm~l~~~~~k---------------rkk~vvd~~~hpqtlsV~~TRa~~~~i~v 233 (1001)
T KOG2040|consen 174 DLTGLPMAN-----ASLLDEGTAAAEAMALCNRINK---------------RKKFVVDSNCHPQTLSVVKTRAKGFGIKV 233 (1001)
T ss_pred hccCCcccc-----hhhhccchhHHHHHHHHHhhcc---------------cceEEecCCCCcchhhhhhccccccceeE
Confidence 999998632 2222233 344433333221 235889999998544433 3345554
Q ss_pred EEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccccccccCCC
Q 014163 179 KEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPD 258 (429)
Q Consensus 179 ~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~ 258 (429)
...+..+. | .-.++...+.+-.|.+. |.+.|..++.+.+++. +..+++-.-.-. +-.+.+
T Consensus 234 ~~~~~~~~----~------~s~~~v~gvlvQYP~t~-G~i~d~~el~~~a~~~------~s~vv~atDLLa--LtiLrp- 293 (1001)
T KOG2040|consen 234 VVSDIKEA----D------YSSKDVSGVLVQYPDTE-GSVLDFDELVELAHAN------GSLVVMATDLLA--LTILRP- 293 (1001)
T ss_pred EecCHHHh----h------ccccceeEEEEEcCCCC-CcccCHHHHHHHhhcc------CceEEEeehhhH--HHccCC-
Confidence 33332211 1 11234566777888776 9999999999999999 776553221111 111222
Q ss_pred CccccCCCCeeEEEEcCcccCCCCCCeE-----EEEEeCCCCcccccc---------------------cccCCCCCCCC
Q 014163 259 LEWDFRLPLVKSINVSGHKYGLVYAGVG-----WVVWRTKDDLPDELV---------------------FHINYLGSDQP 312 (429)
Q Consensus 259 ~~~~~~~~~~d~~~~s~hK~~~~p~g~g-----~l~~~~~~~~~~~~~---------------------~~~~~~~~~~~ 312 (429)
+.. -++|....|++.++ .|.|-| ++.+++ .+.+.+. ...+.+.....
T Consensus 294 -Pge---fGaDIavGSsQRFG-VPlGYGGPHAaFfAv~~--~l~R~mPGRiiGvtkD~~gk~a~RLALQTREQHIrRDKA 366 (1001)
T KOG2040|consen 294 -PGE---FGADIAVGSSQRFG-VPLGYGGPHAAFFAVSE--SLVRMMPGRIIGVTKDALGKEAYRLALQTREQHIRRDKA 366 (1001)
T ss_pred -hhh---cCceeeeccccccC-ccccCCCchHHHHHHHH--HHHhhCCCceEeeeecccccHHHHHHHHHHHHHhhhhcc
Confidence 212 36999999999975 555543 222221 0101000 00011111111
Q ss_pred CceeccCCchhHHHHHHHHH--HHcCHHHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHH
Q 014163 313 TFTLNFSKGSSQIIAQYYQF--IRLGFEGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFE 390 (429)
Q Consensus 313 ~~~~~~tr~~~~~~~~~~al--~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~ 390 (429)
+..+ ||. ...++-.+++ -+.|.+|++++.++.....-+|...|+..+ -+++..+ -+..+.+++.. +.++
T Consensus 367 TSNI-CTA--QALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~ag-hel~~k~-fFDTLkI~~~~----s~~~ 437 (1001)
T KOG2040|consen 367 TSNI-CTA--QALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNAG-HELQHKP-FFDTLKIRCGC----SAEE 437 (1001)
T ss_pred chhh-hHH--HHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhcc-hhhcccc-ccceEEEEecC----cHHH
Confidence 1111 222 1122222222 235899999999999999999999999887 7777665 45566666642 4455
Q ss_pred HHHHHHHHHhccCceec
Q 014163 391 ISEGLRKKLNRFQVVYP 407 (429)
Q Consensus 391 ~~~~L~~~l~~~G~~~~ 407 (429)
+-.+-. +++|-++
T Consensus 438 ~l~rA~----~~~iNlr 450 (1001)
T KOG2040|consen 438 VLDRAA----KRQINLR 450 (1001)
T ss_pred HHHHHH----hhcCceE
Confidence 544444 5555544
No 392
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=97.88 E-value=0.00042 Score=64.50 Aligned_cols=283 Identities=14% Similarity=0.136 Sum_probs=141.0
Q ss_pred hhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCc-EEEEcCCCchHHHHH
Q 014163 92 VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKP-NIVTGANVQVCWEKF 170 (429)
Q Consensus 92 ~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~-~vi~~~~~h~s~~~~ 170 (429)
...+||+.+ +.|-++.|-...+. ..+++.+|+|+-++.++.++.... .+...| .|+.+.|.|+++...
T Consensus 44 ~s~eL~~~I-r~LH~~VGNAvt~g--r~IV~GtGsTQL~~AalyALSp~~--------~~~~~p~~VVa~aPYY~~Y~~q 112 (363)
T PF04864_consen 44 ISPELERQI-RRLHRVVGNAVTDG--RYIVFGTGSTQLFNAALYALSPNA--------SPSSSPASVVAAAPYYSSYPEQ 112 (363)
T ss_dssp S-HHHHHHH-HHHHHHH-SB--TT--SEEEEECHHHHHHHHHHHHHCHHT---------TTSSSEEEEE-SS--CHHHHH
T ss_pred ccHHHHHHH-HHHHHHhccccccC--cEEEEcCCHHHHHHHHHHhcCCCC--------CCCCCCceeEecCCCccchHHH
Confidence 456777554 45666777654322 468999999999998888875430 011234 788888999999888
Q ss_pred HHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccc
Q 014163 171 ARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGF 250 (429)
Q Consensus 171 ~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~ 250 (429)
...+.-..-...-|...+. + .=...+..=++|+||||-|.+.. .+++.- +..+|.|-||-.
T Consensus 113 t~~f~s~~y~w~Gda~~~~-~------~~~~~~~IElVTSPNNPDG~lr~-----~V~~g~------~~k~I~D~AYYW- 173 (363)
T PF04864_consen 113 TDFFDSRLYKWAGDASNFK-N------SDNPSPYIELVTSPNNPDGQLRE-----AVLNGS------SGKVIHDLAYYW- 173 (363)
T ss_dssp CCCT-BTTEEEEEECCCGT-T-------S-CCGEEEEEESS-TTT-----------SSTTT------EEEEEEE-TT-S-
T ss_pred HHhccccCccccccHHhhc-c------CCCCCCeEEEEeCCCCCcccccc-----hhcCCC------Ccceeeeeeeec-
Confidence 7766554444443332232 1 10123455578999999998741 123333 667899999975
Q ss_pred cccccCCCCccccCCCCeeEEEEcCcc-cCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCch-hHHHHH
Q 014163 251 IAPFLYPDLEWDFRLPLVKSINVSGHK-YGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGS-SQIIAQ 328 (429)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~d~~~~s~hK-~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~-~~~~~~ 328 (429)
|++.+-.. . ..=|.+.|+.-| .+.++.+.||.++++++...+ ...|+.-+ ++.-++.. .+++++
T Consensus 174 --PhyTpI~~---~-aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~k----M~~y~~ln----TiGvS~dsQLRa~ki 239 (363)
T PF04864_consen 174 --PHYTPITA---P-ADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKK----MTKYMELN----TIGVSRDSQLRALKI 239 (363)
T ss_dssp --TTTS---S-----B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHH----HHHHHHHH----CSS--HHHHHHHHHH
T ss_pred --ccccccCC---C-CCCceEEEEEecccCccccccceeeecCHHHHHH----HHHHHHHh----cccCcHHHHHHHHHH
Confidence 33433211 0 134777777666 688888999999998654322 22222111 01012211 223333
Q ss_pred HHHH-HHcCHH-----HHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCC------------CceEEEEEecCCCCCCHHH
Q 014163 329 YYQF-IRLGFE-----GYKNIMENCMGNARALREGLEKTGRFEILSKDV------------GVPLVAFSLKDSSAHTVFE 390 (429)
Q Consensus 329 ~~al-~~l~~~-----g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~------------~~~~v~f~~~~~~~~~~~~ 390 (429)
..++ ...+.. -+.--.+...++-+.|.+.++....|.+..-++ ....--+++...+ ..+
T Consensus 240 Lk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlkCe~ee---d~D 316 (363)
T PF04864_consen 240 LKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLKCEREE---DED 316 (363)
T ss_dssp HHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEEESSCG---GSS
T ss_pred HHHHHhcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEecCCcc---ccc
Confidence 3222 233322 223334555567777888888777677654332 1223344554321 134
Q ss_pred HHHHHHHHHhccCceecccCCCCCCCceEEEEEecc
Q 014163 391 ISEGLRKKLNRFQVVYPQKLPMSYPWSTKLRVISHL 426 (429)
Q Consensus 391 ~~~~L~~~l~~~G~~~~~~~~~~~~~~~~lRi~~~~ 426 (429)
-...|+ +.||+-+...... -+..+.|+|...
T Consensus 317 C~~~l~----~~~I~tr~G~~fg-a~~ryVRlSml~ 347 (363)
T PF04864_consen 317 CYAVLR----EAKIITRSGVLFG-ADSRYVRLSMLK 347 (363)
T ss_dssp HHHHHH----CTTEEEEEGGGGT-S-TTEEEEESSS
T ss_pred HHHHHH----hCCcccCCCCccC-CCCCeEEEeccC
Confidence 445566 8888866542222 245579998753
No 393
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=97.72 E-value=0.0062 Score=55.04 Aligned_cols=289 Identities=16% Similarity=0.059 Sum_probs=159.3
Q ss_pred ccccccccCCChHHHHHHHHHHcCcCCCCC---c---cChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHH
Q 014163 58 LNLASFVTTWMEPECDKLVMASINKNYVDM---D---EYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIM 131 (429)
Q Consensus 58 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~ 131 (429)
.||+.+--..|++.+.++-...+|-+.... + .+.....+-+.....+++|+++|.+. .+.+.-||...-+
T Consensus 9 vnFaaGPAklp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~----~vlf~QGGGt~qF 84 (370)
T KOG2790|consen 9 VNFAAGPAKLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNY----KVLFLQGGGTGQF 84 (370)
T ss_pred eecCCCcccCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCce----eEEEEeCCCcccc
Confidence 344444333355567777777776553322 1 23455666678888999999999753 3555554433322
Q ss_pred HHHH-HHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEe-ccCCc--cccCHHHHHHHhhhCCeEEE
Q 014163 132 LAGL-AFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVK-LEEGY--YVMNPVKAVELVDENTICVA 207 (429)
Q Consensus 132 ~al~-a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~-~~~~~--~~~d~~~l~~~i~~~~~~v~ 207 (429)
.|+. .+.. . +.|. .-+-|+...=.--++..+. .+|.....++ ..+-. --.|.+.++ ++++...|.
T Consensus 85 aAv~lNL~g--l----K~g~--~AdYiVTGsWS~KA~~EAk-k~~~~~~V~~~~k~y~ygkvPd~~~w~--~~~da~yvy 153 (370)
T KOG2790|consen 85 AAVPLNLIG--L----KHGR--CADYVVTGSWSAKAAEEAK-KYGTPNIVIPKLKSYTYGKVPDPSTWE--LNPDASYVY 153 (370)
T ss_pred cccchhhhc--c----ccCC--ccceEEeccccHHHHHHHH-hhCCceEEeccccccccCcCCChhhcc--cCCCccEEE
Confidence 2222 1111 0 0110 1123444433333455553 4454433333 22111 123444433 233446899
Q ss_pred EeeCCCcccccc-ChHHHHHHHHHhhhccCCCccEEeecccccccccccCCCCccccCCCCeeEEEEcCcccCCCCCCeE
Q 014163 208 AILGSTLTGEFE-DVKLLHDLLTKKNEETGWDTPIHVDAASGGFIAPFLYPDLEWDFRLPLVKSINVSGHKYGLVYAGVG 286 (429)
Q Consensus 208 ~~~~~~~tG~~~-~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~~d~~~~s~hK~~~~p~g~g 286 (429)
+|...|..|.-- ++. +-.-+ +..++.|-..-. +.. +.|+ ...+++....+|.. +|.|.-
T Consensus 154 yCaNETVHGVEf~~~P----~~~~~------~~vlVaDmSSnf-----lSr--pvDv--sk~gvi~aGAQKN~-G~aG~T 213 (370)
T KOG2790|consen 154 YCANETVHGVEFDFIP----VNDPK------GAVLVADMSSNF-----LSR--PVDV--SKFGVIFAGAQKNV-GPAGVT 213 (370)
T ss_pred EecCceeeceecCCCC----CCCCC------CceEEEecccch-----hcC--Cccc--hhcceEEecccccc-CccccE
Confidence 999999999763 222 11123 888888875532 111 2233 35677888899976 678888
Q ss_pred EEEEeCCCCcccccccccCCCCCC--CCCceeccCCchhHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 014163 287 WVVWRTKDDLPDELVFHINYLGSD--QPTFTLNFSKGSSQIIAQYYQFIRLG-FEGYKNIMENCMGNARALREGLEKTGR 363 (429)
Q Consensus 287 ~l~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~tr~~~~~~~~~~al~~l~-~~g~~~~~~~~~~~~~~l~~~L~~~~~ 363 (429)
++++|+. .+.......+.-+... ....++-.|++.+.+..+-..++.+. ..|++++.+...+-++.+.+.|.+..+
T Consensus 214 vvivr~d-llg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~g 292 (370)
T KOG2790|consen 214 VVIVRKD-LLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNG 292 (370)
T ss_pred EEEEehh-hhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 8888864 3333222222222111 12223346777666666666776664 457888888889999999999998866
Q ss_pred eEEee-CCC--CceEEEEEecC
Q 014163 364 FEILS-KDV--GVPLVAFSLKD 382 (429)
Q Consensus 364 ~~~~~-~~~--~~~~v~f~~~~ 382 (429)
|-... ++. +-.-|+|++.+
T Consensus 293 fy~cpVe~~~RS~MNV~Fri~~ 314 (370)
T KOG2790|consen 293 FYRCPVEPSVRSRMNVPFRIEK 314 (370)
T ss_pred eEEcccchhhhhhcccceeecc
Confidence 65443 221 33467899864
No 394
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=96.60 E-value=0.1 Score=47.81 Aligned_cols=266 Identities=13% Similarity=0.052 Sum_probs=125.2
Q ss_pred CceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhc------Cc---eeEEE---eccC-
Q 014163 119 VGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYF------EV---ELKEV---KLEE- 185 (429)
Q Consensus 119 ~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~------G~---~v~~v---~~~~- 185 (429)
...|+++|||||.+|++.+++-.. .++.|.+....|.-+....+.. |- ++.+| |+.+
T Consensus 104 vc~F~NSGSEANDLALRLAR~ftk----------hqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDv 173 (452)
T KOG1403|consen 104 VCFFVNSGSEANDLALRLARNFTK----------HQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDV 173 (452)
T ss_pred EEEEecCCchhhHHHHHHHHhhcc----------cCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccc
Confidence 389999999999999999987411 2245555544444222222221 11 12222 3211
Q ss_pred --C-----------ccccCHHHHHHHhhhC---C---eEEEEeeCCCccccccC----hHHHHHHHHHhhhccCCCccEE
Q 014163 186 --G-----------YYVMNPVKAVELVDEN---T---ICVAAILGSTLTGEFED----VKLLHDLLTKKNEETGWDTPIH 242 (429)
Q Consensus 186 --~-----------~~~~d~~~l~~~i~~~---~---~~v~~~~~~~~tG~~~~----l~~I~~la~~~~~~~~~~~~l~ 242 (429)
+ .+..-.+.+++.+++. - .+.+.-+-.+--|.+-| ++++++..+.+ |-..|
T Consensus 174 yrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~a------GGv~I 247 (452)
T KOG1403|consen 174 YRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSA------GGVCI 247 (452)
T ss_pred cccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcC------CCeEE
Confidence 0 0112233445544431 1 11222222233355533 56788888888 99999
Q ss_pred eecccccccccccCCCCccccCCC--CeeEEEEcCcccCCCCCCeEEEEEeCCCCccccccc-ccCCCCCCCCCceeccC
Q 014163 243 VDAASGGFIAPFLYPDLEWDFRLP--LVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVF-HINYLGSDQPTFTLNFS 319 (429)
Q Consensus 243 vD~a~~~~~~~~~~~~~~~~~~~~--~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~t 319 (429)
.|+++-||.- .. ..-|.+..- -.|.++ .-|-++.+..++.+.++.+ +.+.+.. -..|... +.|.
T Consensus 248 aDEVQvGFGR--vG-~hyWafq~y~fiPDIVt--mgKpmGNGhPVa~Vattke--IA~Af~atgv~YFNT------yGGn 314 (452)
T KOG1403|consen 248 ADEVQVGFGR--VG-SHYWAFQTYNFIPDIVT--MGKPMGNGHPVAAVATTKE--IAQAFHATGVEYFNT------YGGN 314 (452)
T ss_pred eehhhhcccc--cc-hhhhhhhhhccccchhe--ecccCCCCCeeeEEeccHH--HHHHhccccceehhc------cCCC
Confidence 9999977532 11 111111100 134333 2254555556676665432 2232221 1223221 1133
Q ss_pred CchhHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhCC-CeEEeeCCCCce-EEEEEecCC--CCCCHHHHHHHH
Q 014163 320 KGSSQIIAQYYQFIRLGFEGYKNIMENCMGNARALREGLEKTG-RFEILSKDVGVP-LVAFSLKDS--SAHTVFEISEGL 395 (429)
Q Consensus 320 r~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~~~~~-~v~f~~~~~--~~~~~~~~~~~L 395 (429)
+ .+-....+.++.+..+ ...++..+..++|...|++.. ..+++++-...+ ++-+.+..+ ......+.+..+
T Consensus 315 P--VsCAv~laVm~v~e~E---~Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~ 389 (452)
T KOG1403|consen 315 P--VSCAVGLAVMRVCEDE---NLQEHAQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWV 389 (452)
T ss_pred c--hhHHHHHHHHHHHhhh---hHHHHHHHHHHHHHHHHHHHhhhccceeccccceEEEeeeeecccccCCCcHHHHHHH
Confidence 3 2333344455554444 444555666666666666542 245666532233 233333221 122334555566
Q ss_pred HHHHhccC-ceecccCCCCCCCceEEEE
Q 014163 396 RKKLNRFQ-VVYPQKLPMSYPWSTKLRV 422 (429)
Q Consensus 396 ~~~l~~~G-~~~~~~~~~~~~~~~~lRi 422 (429)
..+|.+.. +.+++ +-++.+.|.+
T Consensus 390 v~rlke~y~VLlsa----DGPh~NilKi 413 (452)
T KOG1403|consen 390 VNRLKELYRVLLSA----DGPHRNILKI 413 (452)
T ss_pred HHHHHHhhhEEEec----CCCCCceeec
Confidence 66666764 55442 3345555543
No 395
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=96.48 E-value=0.16 Score=47.69 Aligned_cols=182 Identities=13% Similarity=0.079 Sum_probs=94.9
Q ss_pred CHHHHHHHhhh-----CCeEEEEeeCC-Cc----cccccChHHHHHHHHHhhhccCCCccEEeecccccccc-cccCCCC
Q 014163 191 NPVKAVELVDE-----NTICVAAILGS-TL----TGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFIA-PFLYPDL 259 (429)
Q Consensus 191 d~~~l~~~i~~-----~~~~v~~~~~~-~~----tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~~-~~~~~~~ 259 (429)
-++++|++|.. +|.+-+++-|- .. .+.-+=+.++.+++++| ++.++||+++-|+.. .-+...-
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh------~v~fivDEVQTGgGaTGk~WaHe 327 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKH------GVAFIVDEVQTGGGATGKFWAHE 327 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhc------CeEEEeeeeecCCCccCceeeeh
Confidence 35667777764 24433333332 22 23446689999999999 999999999954332 1111111
Q ss_pred ccccCCCCeeEEEEcCcccCCCCCCeEEEEEeCCCCcccccccccCCCCCCCCCceeccCCchhHHHHHHHHHHHcCHHH
Q 014163 260 EWDFRLPLVKSINVSGHKYGLVYAGVGWVVWRTKDDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEG 339 (429)
Q Consensus 260 ~~~~~~~~~d~~~~s~hK~~~~p~g~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tr~~~~~~~~~~al~~l~~~g 339 (429)
.+++.. -.|.+++ ++|+..+ |++ -+++.. .+..|...+ + ..|-+ ...+-+-..++.+.+
T Consensus 328 hw~l~~-PpD~vTF-SKK~q~g----Gff--h~~~fr-----pn~pYrifN--T--WmGdP--~k~lll~~vv~~I~~-- 386 (484)
T KOG1405|consen 328 HWNLDS-PPDVVTF-SKKFQTG----GFF--HDEEFR-----PNEPYRIFN--T--WMGDP--SKNLLLEEVVQEIKR-- 386 (484)
T ss_pred hcCCCC-Cccceeh-hhhhhcC----ccc--cCcccC-----CCchHHHhh--h--hcCCh--HHHHHHHHHHHHHhH--
Confidence 122222 3788774 5676532 332 233222 222232211 1 11222 334434444444444
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC----CCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceec
Q 014163 340 YKNIMENCMGNARALREGLEKT----GRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYP 407 (429)
Q Consensus 340 ~~~~~~~~~~~~~~l~~~L~~~----~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~ 407 (429)
+..++......++|.+.|.++ |+. +-.-..+..+++|.++.. ++.+.|...+.-+|+.+-
T Consensus 387 -~~Ll~n~~~vG~~l~~gL~~Lq~~~p~~-~~~~RGrGTF~a~d~ps~------~~Rdk~i~~~~~nGv~~G 450 (484)
T KOG1405|consen 387 -EDLLNNVAHVGKALLKGLLELQAKYPGK-INNLRGRGTFIAWDCPSG------SIRDKLILIARLNGVNLG 450 (484)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHhCchh-hhcccccceEEEEeCCCh------HHHHHHHHHHHHcCceec
Confidence 345566666677777777654 421 211122667888888642 445555555558898753
No 396
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=96.35 E-value=0.037 Score=46.52 Aligned_cols=63 Identities=10% Similarity=0.098 Sum_probs=50.1
Q ss_pred CccChhhHHHHHHHHHHHHHhhC--CCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCc
Q 014163 87 MDEYPVTTELQNRCVNMIAHLFN--TPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQ 164 (429)
Q Consensus 87 ~~~~~~~~~le~~~~~~la~l~g--~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h 164 (429)
|..+.+..++++++.+++.+.+| .+.+. ..+++|+|+++|+..++.+++++ ++.|+++.+.|
T Consensus 88 Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~p---d~Ivvt~Ga~~al~~l~~~l~dp-------------GD~VlVp~P~Y 151 (153)
T PLN02994 88 FQDYHGLANFRKAIANFMAEARGGRVKFDA---DMIVLSAGATAANEIIMFCIADP-------------GDAFLVPTPYY 151 (153)
T ss_pred CCCCCCcHHHHHHHHHHHHHHhCCCCccch---hheEEcCCHHHHHHHHHHHHcCC-------------CCEEEEeCCCC
Confidence 45566889999999999999988 33322 24899999999999998888762 36899999887
Q ss_pred h
Q 014163 165 V 165 (429)
Q Consensus 165 ~ 165 (429)
.
T Consensus 152 ~ 152 (153)
T PLN02994 152 A 152 (153)
T ss_pred C
Confidence 5
No 397
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=69.62 E-value=55 Score=30.65 Aligned_cols=133 Identities=13% Similarity=0.010 Sum_probs=76.9
Q ss_pred hhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCC--ch--HH
Q 014163 92 VTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANV--QV--CW 167 (429)
Q Consensus 92 ~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~--h~--s~ 167 (429)
....||.-+-+.+.+ |++ ..+|.||.++|+....++..+.+ |. +.+.++-... +. ..
T Consensus 48 K~RKLefll~eal~~--g~d--------TlvT~GgiQSNh~r~tAavA~~l------Gl---~~v~ile~~~~~y~~ngn 108 (323)
T COG2515 48 KIRKLEFLLGEALRK--GAD--------TLVTYGGIQSNHVRQTAAVAAKL------GL---KCVLILENIEANYLLNGN 108 (323)
T ss_pred HHHHHHHHHhhhhhc--CCc--------EEEEecccchhHHHHHHHHHHhc------CC---cEEEEEeccccccccccc
Confidence 556666554444433 332 78999999999987776655422 21 2344443333 11 12
Q ss_pred HHHHHhcCceeEEEeccCCcc--ccCHHHHHHHhhhC--CeEEEEeeCCCccccc---cChHHHHHHHHHhhhccCCCcc
Q 014163 168 EKFARYFEVELKEVKLEEGYY--VMNPVKAVELVDEN--TICVAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTP 240 (429)
Q Consensus 168 ~~~~~~~G~~v~~v~~~~~~~--~~d~~~l~~~i~~~--~~~v~~~~~~~~tG~~---~~l~~I~~la~~~~~~~~~~~~ 240 (429)
.-..+.+|..++.++...+ . ....+.+.+.++.+ ...|+.-.++|+.|.. .-..||.+-++++- .+=
T Consensus 109 ~Ll~~l~G~~~~~~~~~~d-~~~~~~~~~~~e~~~~~g~kpyvIp~GG~~~~g~lGyv~~a~Ei~~Q~~~~~-----~fD 182 (323)
T COG2515 109 LLLSKLMGAEVRAVDAGTD-IGINASAEELAEEVRKQGGKPYVIPEGGSSPLGALGYVRLALEIAEQAEQLL-----KFD 182 (323)
T ss_pred hhhhhhcCceEEEecCCCC-hhhchhhHHHHHHHHhcCCCCcEeccCCcCccccccHHHHHHHHHHHHhhcc-----CCC
Confidence 2234678999999886543 4 34556666666653 4567777778886655 55566666666520 455
Q ss_pred EEeeccccc
Q 014163 241 IHVDAASGG 249 (429)
Q Consensus 241 l~vD~a~~~ 249 (429)
.+|.++-++
T Consensus 183 ~vVva~gs~ 191 (323)
T COG2515 183 SVVVAPGSG 191 (323)
T ss_pred EEEEeCCCc
Confidence 555555443
No 398
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=62.65 E-value=47 Score=29.93 Aligned_cols=65 Identities=6% Similarity=-0.032 Sum_probs=44.5
Q ss_pred HHHHHHhcCceeEEE-eccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEe
Q 014163 167 WEKFARYFEVELKEV-KLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (429)
Q Consensus 167 ~~~~~~~~G~~v~~v-~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~v 243 (429)
+.++++.+|..+..+ +...+ ..--.+.++.++..++.+|++...... ....+.+-|++. |++++.
T Consensus 20 ~~~~a~~~g~~~~~~~~~~~d-~~~q~~~i~~~i~~~~d~Iiv~~~~~~-----~~~~~l~~~~~~------gIpvv~ 85 (257)
T PF13407_consen 20 AKAAAKELGYEVEIVFDAQND-PEEQIEQIEQAISQGVDGIIVSPVDPD-----SLAPFLEKAKAA------GIPVVT 85 (257)
T ss_dssp HHHHHHHHTCEEEEEEESTTT-HHHHHHHHHHHHHTTESEEEEESSSTT-----TTHHHHHHHHHT------TSEEEE
T ss_pred HHHHHHHcCCEEEEeCCCCCC-HHHHHHHHHHHHHhcCCEEEecCCCHH-----HHHHHHHHHhhc------CceEEE
Confidence 566778889999886 44333 344556778888888887775554432 345666778888 997765
No 399
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=58.80 E-value=89 Score=24.66 Aligned_cols=76 Identities=16% Similarity=0.089 Sum_probs=47.3
Q ss_pred EEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCC--CccccccChHHHHHHHHHhhh
Q 014163 156 NIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGS--TLTGEFEDVKLLHDLLTKKNE 233 (429)
Q Consensus 156 ~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~--~~tG~~~~l~~I~~la~~~~~ 233 (429)
+++.+..+...+.. ..|+.+..|++...++. .++.+.|.....-++++.++ ...+...+-..|...|-++
T Consensus 29 ~i~AT~gTa~~L~~---~~Gi~v~~vk~~~~~g~---~~i~~~i~~g~i~~VInt~~~~~~~~~~~dg~~iRr~a~~~-- 100 (115)
T cd01422 29 RLVATGTTGLLIQE---ATGLTVNRMKSGPLGGD---QQIGALIAEGEIDAVIFFRDPLTAQPHEPDVKALLRLCDVY-- 100 (115)
T ss_pred EEEEechHHHHHHH---hhCCcEEEEecCCCCch---hHHHHHHHcCceeEEEEcCCCCCCCcccccHHHHHHHHHHc--
Confidence 45555544433332 15888887755322233 44666677666666666665 3334366788999999999
Q ss_pred ccCCCccEEe
Q 014163 234 ETGWDTPIHV 243 (429)
Q Consensus 234 ~~~~~~~l~v 243 (429)
+++++.
T Consensus 101 ----~Ip~~T 106 (115)
T cd01422 101 ----NIPLAT 106 (115)
T ss_pred ----CCCEEE
Confidence 988764
No 400
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=57.25 E-value=45 Score=31.35 Aligned_cols=83 Identities=20% Similarity=0.032 Sum_probs=50.0
Q ss_pred ceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHh
Q 014163 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELV 199 (429)
Q Consensus 120 ~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i 199 (429)
++=.++|+.++-+|+.++.. | -+-.+++|+..-.--.+..+.+|++++.+|..++...=-.+.+++..
T Consensus 65 IVE~TSGNTGI~LA~vaa~~---------G---y~~iivmP~~~S~er~~~l~a~GAevi~t~~~~g~~~~a~~~a~el~ 132 (300)
T COG0031 65 IVEATSGNTGIALAMVAAAK---------G---YRLIIVMPETMSQERRKLLRALGAEVILTPGAPGNMKGAIERAKELA 132 (300)
T ss_pred EEEcCCChHHHHHHHHHHHc---------C---CcEEEEeCCCCCHHHHHHHHHcCCEEEEcCCCCCchHHHHHHHHHHH
Confidence 55566777788778777654 1 12356677766666777889999999999874431111234444444
Q ss_pred hhCCe-EEEEeeCCCc
Q 014163 200 DENTI-CVAAILGSTL 214 (429)
Q Consensus 200 ~~~~~-~v~~~~~~~~ 214 (429)
.+.+. ++..+.-.|+
T Consensus 133 ~~~p~~~~~~~Qf~Np 148 (300)
T COG0031 133 AEIPGYAVWLNQFENP 148 (300)
T ss_pred HhCCCceEchhhcCCC
Confidence 55443 5554344443
No 401
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=57.22 E-value=91 Score=24.32 Aligned_cols=73 Identities=16% Similarity=0.218 Sum_probs=47.0
Q ss_pred HHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhh-CCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEee
Q 014163 166 CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVD 244 (429)
Q Consensus 166 s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD 244 (429)
.+..+++..|.++..++.+ .+.+++.+.+.+ ++.+|.++.. .+.......++++..|+. +.++.+++=
T Consensus 19 ~la~~l~~~G~~v~~~d~~-----~~~~~l~~~~~~~~pd~V~iS~~--~~~~~~~~~~l~~~~k~~----~p~~~iv~G 87 (121)
T PF02310_consen 19 YLAAYLRKAGHEVDILDAN-----VPPEELVEALRAERPDVVGISVS--MTPNLPEAKRLARAIKER----NPNIPIVVG 87 (121)
T ss_dssp HHHHHHHHTTBEEEEEESS-----B-HHHHHHHHHHTTCSEEEEEES--SSTHHHHHHHHHHHHHTT----CTTSEEEEE
T ss_pred HHHHHHHHCCCeEEEECCC-----CCHHHHHHHHhcCCCcEEEEEcc--CcCcHHHHHHHHHHHHhc----CCCCEEEEE
Confidence 3555667779999888653 344777776654 6777776554 233444566666666655 338899988
Q ss_pred ccccc
Q 014163 245 AASGG 249 (429)
Q Consensus 245 ~a~~~ 249 (429)
|.+.-
T Consensus 88 G~~~t 92 (121)
T PF02310_consen 88 GPHAT 92 (121)
T ss_dssp ESSSG
T ss_pred CCchh
Confidence 87753
No 402
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=56.77 E-value=21 Score=31.07 Aligned_cols=34 Identities=15% Similarity=0.060 Sum_probs=29.5
Q ss_pred eEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEe
Q 014163 204 ICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (429)
Q Consensus 204 ~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~v 243 (429)
.+|.++-|+|..|.++|.+.-++++++. |+.++.
T Consensus 114 vvILLTDG~n~~~~i~P~~aAa~lA~~~------gV~iyt 147 (191)
T cd01455 114 IVIVLSDANLERYGIQPKKLADALAREP------NVNAFV 147 (191)
T ss_pred EEEEEeCCCcCCCCCChHHHHHHHHHhC------CCEEEE
Confidence 5677899999999999998888999999 988764
No 403
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=55.65 E-value=15 Score=29.76 Aligned_cols=45 Identities=18% Similarity=0.227 Sum_probs=27.5
Q ss_pred ccCHHH----HHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeec
Q 014163 189 VMNPVK----AVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDA 245 (429)
Q Consensus 189 ~~d~~~----l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~ 245 (429)
.++.+. +++.++.++.+|+++.+.. +.+.+.++|+++ +++++.=.
T Consensus 64 ~l~~~~r~~~l~~l~~~~~P~iIvt~~~~------~p~~l~e~a~~~------~ipll~t~ 112 (127)
T PF02603_consen 64 SLDEEERKERLEKLFSYNPPCIIVTRGLE------PPPELIELAEKY------NIPLLRTP 112 (127)
T ss_dssp CS-HHHHCCHHHHHCTTT-S-EEEETTT---------HHHHHHHHHC------T--EEEES
T ss_pred HCCHHHHHHHHHHHhCCCCCEEEEECcCC------CCHHHHHHHHHh------CCcEEEcC
Confidence 355554 4455556888999998874 589999999999 99887543
No 404
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=55.07 E-value=19 Score=30.47 Aligned_cols=50 Identities=18% Similarity=0.255 Sum_probs=39.3
Q ss_pred CHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeeccccc
Q 014163 191 NPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (429)
Q Consensus 191 d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~ 249 (429)
|..+++++++.+...+++-. |.+.+++++.+.+++.++ .+++|+|=..|.
T Consensus 12 ~~~~le~~les~~~~vflL~-----~~i~~ik~ivk~lK~~gK----~vfiHvDLv~Gl 61 (181)
T COG1954 12 DNKDLEKALESESQYVFLLT-----GHILNIKEIVKKLKNRGK----TVFIHVDLVEGL 61 (181)
T ss_pred hHHHHHHHhcCCCeEEEEEe-----chhhhHHHHHHHHHhCCc----EEEEEeHHhccc
Confidence 56778888888887776654 556689999999999843 579999988874
No 405
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=53.56 E-value=59 Score=30.98 Aligned_cols=94 Identities=11% Similarity=0.098 Sum_probs=55.5
Q ss_pred EEEEcCCCchH-----HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEE-eeC--CCccccccChHHHHHH
Q 014163 156 NIVTGANVQVC-----WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAA-ILG--STLTGEFEDVKLLHDL 227 (429)
Q Consensus 156 ~vi~~~~~h~s-----~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~-~~~--~~~tG~~~~l~~I~~l 227 (429)
+++....++-+ +..-++.+|++++.-+...+.-.+-.|+++.+...+...|++ |.| +|-..-.+.+++|..+
T Consensus 170 VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~~G~DpAaVafDAi~~Akar~~DvvliDTAGRLhnk~nLM~EL~KI~rV 249 (340)
T COG0552 170 VLLAAGDTFRAAAIEQLEVWGERLGVPVISGKEGADPAAVAFDAIQAAKARGIDVVLIDTAGRLHNKKNLMDELKKIVRV 249 (340)
T ss_pred EEEEecchHHHHHHHHHHHHHHHhCCeEEccCCCCCcHHHHHHHHHHHHHcCCCEEEEeCcccccCchhHHHHHHHHHHH
Confidence 45555555543 334456678776654322222345566777777777655444 554 4555667889999999
Q ss_pred HHHhhhccCCCccEEeeccccc
Q 014163 228 LTKKNEETGWDTPIHVDAASGG 249 (429)
Q Consensus 228 a~~~~~~~~~~~~l~vD~a~~~ 249 (429)
+++..++---.++++.|+.-|-
T Consensus 250 ~~k~~~~ap~e~llvlDAttGq 271 (340)
T COG0552 250 IKKDDPDAPHEILLVLDATTGQ 271 (340)
T ss_pred hccccCCCCceEEEEEEcccCh
Confidence 9887110000267777998764
No 406
>PRK14994 SAM-dependent 16S ribosomal RNA C1402 ribose 2'-O-methyltransferase; Provisional
Probab=50.20 E-value=1.4e+02 Score=27.95 Aligned_cols=79 Identities=8% Similarity=-0.065 Sum_probs=51.2
Q ss_pred cEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhc
Q 014163 155 PNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEE 234 (429)
Q Consensus 155 ~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~ 234 (429)
+.|++.+.-+. .++...++++...+.+.+.++.-..+.+.+.+.+...+++++..-+| +..||-..+.+.|++.
T Consensus 39 DvI~~edtr~t--~~ll~~~~i~~~~~~~~~~~~~~~~~~i~~~l~~G~~ValvSdaGdP-~I~dpg~~Lv~~~~~~--- 112 (287)
T PRK14994 39 DLIAAEDTRHT--GLLLQHFAINARLFALHDHNEQQKAETLLAKLQEGQNIALVSDAGTP-LINDPGYHLVRTCREA--- 112 (287)
T ss_pred CEEEEeCCcch--HHHHhhcCCCCEEEEccCCCHHHHHHHHHHHHHCCCeEEEEccCCCC-ceeCCHHHHHHHHHHC---
Confidence 46666666554 33566677776666665433444455666666665565666634455 6778999999999998
Q ss_pred cCCCccEE
Q 014163 235 TGWDTPIH 242 (429)
Q Consensus 235 ~~~~~~l~ 242 (429)
|+.+.
T Consensus 113 ---gi~v~ 117 (287)
T PRK14994 113 ---GIRVV 117 (287)
T ss_pred ---CCCEE
Confidence 87654
No 407
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=49.91 E-value=12 Score=38.79 Aligned_cols=39 Identities=21% Similarity=0.174 Sum_probs=35.1
Q ss_pred EEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccccc
Q 014163 206 VAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGF 250 (429)
Q Consensus 206 v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~ 250 (429)
+-.-.|++..|..++++++.+-|++. ||-|++|-+++++
T Consensus 201 ~g~yAp~sryGtPedfk~fVD~aH~~------GIgViLD~V~~HF 239 (628)
T COG0296 201 TGYYAPTSRYGTPEDFKALVDAAHQA------GIGVILDWVPNHF 239 (628)
T ss_pred ceeccccccCCCHHHHHHHHHHHHHc------CCEEEEEecCCcC
Confidence 44558889999999999999999999 9999999999875
No 408
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=49.90 E-value=35 Score=33.22 Aligned_cols=79 Identities=19% Similarity=0.279 Sum_probs=47.7
Q ss_pred EEcCCCchHHHHHHHhcC--ceeEEEeccCCccccCHHHHHHHhhh---CCeEEEEeeCCCccccccChHHHHHHHHHhh
Q 014163 158 VTGANVQVCWEKFARYFE--VELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGSTLTGEFEDVKLLHDLLTKKN 232 (429)
Q Consensus 158 i~~~~~h~s~~~~~~~~G--~~v~~v~~~~~~~~~d~~~l~~~i~~---~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~ 232 (429)
++....|....+. +.+. -++..++..+.....+.+.|.+.+.. +-.+++ .....-|.+.+++++.++||+.
T Consensus 95 l~~~~~r~T~~K~-Rv~s~nQQllRvD~Ee~~~~~~~~~ll~~~~~~l~~~~~vV--LSDY~KG~L~~~q~~I~~ar~~- 170 (467)
T COG2870 95 LLRDKNRPTIVKL-RVLSRNQQLLRLDFEEKFPIEDENKLLEKIKNALKSFDALV--LSDYAKGVLTNVQKMIDLAREA- 170 (467)
T ss_pred eEeecCCCceeee-eeecccceEEEecccccCcchhHHHHHHHHHHHhhcCCEEE--EeccccccchhHHHHHHHHHHc-
Confidence 4455566554443 2222 23444444332122445555555554 234443 3456789999999999999999
Q ss_pred hccCCCccEEeec
Q 014163 233 EETGWDTPIHVDA 245 (429)
Q Consensus 233 ~~~~~~~~l~vD~ 245 (429)
++++++|-
T Consensus 171 -----~~pVLvDP 178 (467)
T COG2870 171 -----GIPVLVDP 178 (467)
T ss_pred -----CCcEEECC
Confidence 99999994
No 409
>PLN02672 methionine S-methyltransferase
Probab=49.43 E-value=4.4e+02 Score=29.86 Aligned_cols=148 Identities=9% Similarity=0.029 Sum_probs=84.4
Q ss_pred HHHHHHcCcCC-CCCccChhhHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCC
Q 014163 74 KLVMASINKNY-VDMDEYPVTTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPY 152 (429)
Q Consensus 74 ~~~~~~~~~~~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~ 152 (429)
..++..+..+. ..|+.-.+...+++.+...|..+++.+-+.+ .+++-.+-..|+..+++...-+..--
T Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 476 (1082)
T PLN02672 408 AYLASALKGLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPD---NVVVFPSRAVAIENALRLFSPRLAIV-------- 476 (1082)
T ss_pred HHHHHHHccCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCcc---ceEEeccHHHHHHHHHHhhChHHHhh--------
Confidence 34455555543 3344444888999999999999999987543 36666677777766666543221000
Q ss_pred CCcEEEEcCCCchHHHHHHHhcCc--------eeEEEeccCCccccCHHHHHHHhhh-CCeEEEEeeCCCccccccChHH
Q 014163 153 DKPNIVTGANVQVCWEKFARYFEV--------ELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKL 223 (429)
Q Consensus 153 ~~~~vi~~~~~h~s~~~~~~~~G~--------~v~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~tG~~~~l~~ 223 (429)
+ --++..-+.-|..+....|. .+..+.-.. +- +.+.++|+. ++.+|+........-+-.-++.
T Consensus 477 --~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (1082)
T PLN02672 477 --D-EHLTRWLPKKWLTSLAIENATSDSKSDDVITVIEAPR---QS--DLVIELIKKLKPQVVVTGMADFEMRTSTAFEH 548 (1082)
T ss_pred --h-hhhhccCCHHHHhHhhhhcccccCccCCeEEEEeCCC---cc--hHHHHHHHhCCCeEEEEeccchhhhhHHHHHH
Confidence 0 01233444456555544442 222332111 12 245555554 4555544444333333356888
Q ss_pred HHHHHHHhhhccCCCccEEeecc
Q 014163 224 LHDLLTKKNEETGWDTPIHVDAA 246 (429)
Q Consensus 224 I~~la~~~~~~~~~~~~l~vD~a 246 (429)
|.+.+++. |++++.|..
T Consensus 549 ~~~~~~~~------~~~~~~~~~ 565 (1082)
T PLN02672 549 LLNVTAEI------GARLFLDIS 565 (1082)
T ss_pred HHHHHHhh------CcEEEEehh
Confidence 99999999 999999973
No 410
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=45.95 E-value=1.6e+02 Score=24.32 Aligned_cols=78 Identities=15% Similarity=0.103 Sum_probs=48.1
Q ss_pred EEEEcCCCchHHHHHHHhc-CceeEEEeccC-CccccCHHHHHHHhhhCCeEEEEeeC--CCccccccChHHHHHHHHHh
Q 014163 156 NIVTGANVQVCWEKFARYF-EVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILG--STLTGEFEDVKLLHDLLTKK 231 (429)
Q Consensus 156 ~vi~~~~~h~s~~~~~~~~-G~~v~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~~--~~~tG~~~~l~~I~~la~~~ 231 (429)
.++.+..+ .+..+.. |+.+..| +.+ .++. .++.+.|.....-++++.+ +...+...+...|...|-++
T Consensus 34 ~l~AT~gT----a~~L~~~~Gi~v~~v-i~~~~gg~---~~i~~~I~~g~i~lVInt~dp~~~~~~~~D~~~IRR~Av~~ 105 (142)
T PRK05234 34 ELYATGTT----GGLIQEATGLDVTRL-LSGPLGGD---QQIGALIAEGKIDMLIFFRDPLTAQPHDPDVKALLRLADVW 105 (142)
T ss_pred EEEEeChH----HHHHHhccCCeeEEE-EcCCCCCc---hhHHHHHHcCceeEEEEecCCCCCCcccchHHHHHHHHHHc
Confidence 45555432 2333344 8887777 322 1122 4466667766555666666 44444356788999999999
Q ss_pred hhccCCCccEEeeccc
Q 014163 232 NEETGWDTPIHVDAAS 247 (429)
Q Consensus 232 ~~~~~~~~~l~vD~a~ 247 (429)
+++++..-+-
T Consensus 106 ------~IP~~T~l~t 115 (142)
T PRK05234 106 ------NIPVATNRAT 115 (142)
T ss_pred ------CCCEEcCHHH
Confidence 9999876544
No 411
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=45.10 E-value=1.6e+02 Score=26.01 Aligned_cols=76 Identities=13% Similarity=0.036 Sum_probs=44.7
Q ss_pred cEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhc
Q 014163 155 PNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEE 234 (429)
Q Consensus 155 ~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~ 234 (429)
+..++.+..........+..|+.++ ..|- -|.+.|.++++.-.. |+++.+.+.....+--..|.+.|++.
T Consensus 24 ~V~~l~R~~~~~~~~~l~~~g~~vv--~~d~----~~~~~l~~al~g~d~-v~~~~~~~~~~~~~~~~~li~Aa~~a--- 93 (233)
T PF05368_consen 24 SVRALVRDPSSDRAQQLQALGAEVV--EADY----DDPESLVAALKGVDA-VFSVTPPSHPSELEQQKNLIDAAKAA--- 93 (233)
T ss_dssp CEEEEESSSHHHHHHHHHHTTTEEE--ES-T----T-HHHHHHHHTTCSE-EEEESSCSCCCHHHHHHHHHHHHHHH---
T ss_pred CcEEEEeccchhhhhhhhcccceEe--eccc----CCHHHHHHHHcCCce-EEeecCcchhhhhhhhhhHHHhhhcc---
Confidence 3444455443334444455687765 3332 278899999985444 45555544444555567899999999
Q ss_pred cCCCccEEe
Q 014163 235 TGWDTPIHV 243 (429)
Q Consensus 235 ~~~~~~l~v 243 (429)
|+-.++
T Consensus 94 ---gVk~~v 99 (233)
T PF05368_consen 94 ---GVKHFV 99 (233)
T ss_dssp ---T-SEEE
T ss_pred ---ccceEE
Confidence 886665
No 412
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=43.58 E-value=3.1e+02 Score=26.40 Aligned_cols=102 Identities=12% Similarity=0.053 Sum_probs=56.6
Q ss_pred CceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCch------HHHHHHHhcCceeEEEeccCCccccCH
Q 014163 119 VGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQV------CWEKFARYFEVELKEVKLEEGYYVMNP 192 (429)
Q Consensus 119 ~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~------s~~~~~~~~G~~v~~v~~~~~~~~~d~ 192 (429)
.++..+||-.+..++..+... + | .++.++.-+..+. -..+.++.+|+....+.++.+
T Consensus 62 ~iV~lSGGkDSs~la~ll~~~-~-------g---l~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i~~d~~------ 124 (343)
T TIGR03573 62 CIIGVSGGKDSTYQAHVLKKK-L-------G---LNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHTITINPE------ 124 (343)
T ss_pred EEEECCCCHHHHHHHHHHHHH-h-------C---CceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEeCCHH------
Confidence 477888999998776444322 1 1 1233333333332 255667778988887776532
Q ss_pred HHHHHHhhhCCeEEEEeeCCCcccc--ccChHHHHHHHHHhhhccCCCccEEeeccccc
Q 014163 193 VKAVELVDENTICVAAILGSTLTGE--FEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (429)
Q Consensus 193 ~~l~~~i~~~~~~v~~~~~~~~tG~--~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~ 249 (429)
.+.+....... ...++... ......+.++|+++ |+.+++.|..+.
T Consensus 125 -~~~~l~~~~~~-----~~~~pc~~c~~~~~~~l~~~A~~~------gi~~Il~G~~~d 171 (343)
T TIGR03573 125 -TFRKLQRAYFK-----KVGDPEWPQDHAIFASVYQVALKF------NIPLIIWGENIA 171 (343)
T ss_pred -HHHHHHHHHHh-----ccCCCchhhhhHHHHHHHHHHHHh------CCCEEEeCCCHH
Confidence 22222211100 11112111 12356788999999 999999987653
No 413
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=43.26 E-value=2.5e+02 Score=27.39 Aligned_cols=83 Identities=19% Similarity=0.061 Sum_probs=48.2
Q ss_pred ceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHh
Q 014163 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELV 199 (429)
Q Consensus 120 ~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i 199 (429)
.+-.++|..+.-+|..+... |. +..|++++..-..-....+.+|++++.++...+ ..-..+..++..
T Consensus 114 vV~aSsGN~G~alA~~a~~~---------G~---~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~~~~-~~~~~~~a~~l~ 180 (368)
T PLN02556 114 LIEPTSGNMGISLAFMAAMK---------GY---KMILTMPSYTSLERRVTMRAFGAELVLTDPTKG-MGGTVKKAYELL 180 (368)
T ss_pred EEEeCCchHHHHHHHHHHHc---------CC---CEEEEECCCCCHHHHHHHHHcCCEEEEECCCCC-ccHHHHHHHHHH
Confidence 44566777777666655432 21 246777877666677788999999998874322 112234444455
Q ss_pred hhCCeEEEEeeCCCcc
Q 014163 200 DENTICVAAILGSTLT 215 (429)
Q Consensus 200 ~~~~~~v~~~~~~~~t 215 (429)
++++-.+.+...+|+.
T Consensus 181 ~~~~~~~~~~q~~np~ 196 (368)
T PLN02556 181 ESTPDAFMLQQFSNPA 196 (368)
T ss_pred HhcCCCCccCCCCCHH
Confidence 5444444444444553
No 414
>TIGR00288 conserved hypothetical protein TIGR00288. This family of orthologs is restricted to but universal among the completed archaeal genomes so far. Eubacterial proteins showing at least local homology include slr1870 from Synechocystis PCC6803 and two proteins from Aquifex aeolicusr, none of which is characterized.
Probab=42.25 E-value=1.6e+02 Score=24.94 Aligned_cols=77 Identities=10% Similarity=-0.075 Sum_probs=50.7
Q ss_pred EEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhcc
Q 014163 156 NIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEET 235 (429)
Q Consensus 156 ~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~ 235 (429)
.++....+...+..++...|++++...-+.+ -.|-+|.++-+.+++...+++.++.. |+..+++.++++
T Consensus 60 R~Y~~a~a~~~l~~~l~~~Gf~pv~~kG~~D-v~laIDame~~~~~~iD~~vLvSgD~------DF~~Lv~~lre~---- 128 (160)
T TIGR00288 60 KVLLNQYASDKLIEAVVNQGFEPIIVAGDVD-VRMAVEAMELIYNPNIDAVALVTRDA------DFLPVINKAKEN---- 128 (160)
T ss_pred EEEechhccHHHHHHHHHCCceEEEecCccc-HHHHHHHHHHhccCCCCEEEEEeccH------hHHHHHHHHHHC----
Confidence 3444444555677788888998775543222 34556666665556555666666643 588899999999
Q ss_pred CCCccEEeec
Q 014163 236 GWDTPIHVDA 245 (429)
Q Consensus 236 ~~~~~l~vD~ 245 (429)
|..+++=|
T Consensus 129 --G~~V~v~g 136 (160)
T TIGR00288 129 --GKETIVIG 136 (160)
T ss_pred --CCEEEEEe
Confidence 98887644
No 415
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=41.67 E-value=65 Score=30.46 Aligned_cols=55 Identities=11% Similarity=0.181 Sum_probs=40.2
Q ss_pred cccCHHHHHHHhhh-----CCeEEEEeeCCCccccc-cChHHHHHHHHHhhhccCCCccEEeecccc
Q 014163 188 YVMNPVKAVELVDE-----NTICVAAILGSTLTGEF-EDVKLLHDLLTKKNEETGWDTPIHVDAASG 248 (429)
Q Consensus 188 ~~~d~~~l~~~i~~-----~~~~v~~~~~~~~tG~~-~~l~~I~~la~~~~~~~~~~~~l~vD~a~~ 248 (429)
..++.+++++.++. ...-+++.+||-|.|.- +...+|.++|++. ++.+++|..-.
T Consensus 109 p~is~~~~~~~l~~~~~~l~~~d~VvlsGSlP~g~~~d~y~~li~~~~~~------g~~vilD~Sg~ 169 (310)
T COG1105 109 PEISEAELEQFLEQLKALLESDDIVVLSGSLPPGVPPDAYAELIRILRQQ------GAKVILDTSGE 169 (310)
T ss_pred CCCCHHHHHHHHHHHHHhcccCCEEEEeCCCCCCCCHHHHHHHHHHHHhc------CCeEEEECChH
Confidence 35666666655442 12234777899998887 5689999999999 99999997543
No 416
>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]
Probab=41.25 E-value=80 Score=29.80 Aligned_cols=83 Identities=16% Similarity=0.079 Sum_probs=64.9
Q ss_pred CcEEEEcCCCchHHHHHHHhcCceeEEEeccC-CccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhh
Q 014163 154 KPNIVTGANVQVCWEKFARYFEVELKEVKLEE-GYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKN 232 (429)
Q Consensus 154 ~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~ 232 (429)
+|..|+++..-.+.....++-.-+...||+.. ....||-+.++++..+.-. .+|+.....+.++++.+.|++.
T Consensus 75 kPd~IVpEiEAI~td~L~elE~~G~~VVP~ArAt~ltMnRegiRrlAAeeLg-----lpTs~Y~fa~s~~e~~~a~~~i- 148 (394)
T COG0027 75 KPDYIVPEIEAIATDALVELEEEGYTVVPNARATKLTMNREGIRRLAAEELG-----LPTSKYRFADSLEELRAAVEKI- 148 (394)
T ss_pred CCCeeeehhhhhhHHHHHHHHhCCceEccchHHHHhhhcHHHHHHHHHHHhC-----CCCccccccccHHHHHHHHHHc-
Confidence 47899999888888777776666666888752 3368999999988776422 4777778889999999999999
Q ss_pred hccCCCccEEeeccc
Q 014163 233 EETGWDTPIHVDAAS 247 (429)
Q Consensus 233 ~~~~~~~~l~vD~a~ 247 (429)
|.+.+|--..
T Consensus 149 -----GfPcvvKPvM 158 (394)
T COG0027 149 -----GFPCVVKPVM 158 (394)
T ss_pred -----CCCeeccccc
Confidence 9999887654
No 417
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=40.34 E-value=65 Score=25.13 Aligned_cols=48 Identities=17% Similarity=0.223 Sum_probs=38.6
Q ss_pred cccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEe
Q 014163 188 YVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (429)
Q Consensus 188 ~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~v 243 (429)
..++++++++.+.+++-.|+ .|+-.+|.+.=.++..+++++. ++-+++
T Consensus 47 Hkl~~eEle~~lee~~E~iv--vGTG~~G~l~l~~ea~e~~r~k------~~~vi~ 94 (121)
T COG1504 47 HKLALEELEELLEEGPEVIV--VGTGQSGMLELSEEAREFFRKK------GCEVIE 94 (121)
T ss_pred cccCHHHHHHHHhcCCcEEE--EecCceeEEEeCHHHHHHHHhc------CCeEEE
Confidence 47999999999999986554 5666788888788888999988 865554
No 418
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=40.03 E-value=68 Score=29.26 Aligned_cols=53 Identities=11% Similarity=0.125 Sum_probs=34.1
Q ss_pred ccCHHHHHHHhhhCCeEEEEeeCCCc------------cccccChHHHHHHHHHhhhccCCCccEEeeccc
Q 014163 189 VMNPVKAVELVDENTICVAAILGSTL------------TGEFEDVKLLHDLLTKKNEETGWDTPIHVDAAS 247 (429)
Q Consensus 189 ~~d~~~l~~~i~~~~~~v~~~~~~~~------------tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~ 247 (429)
.-|-.+|.+.+...+..+++++-+.. .|-.-.-+++.++.+++ ++-++||+.|
T Consensus 11 T~Dar~la~~L~~~~~~~~~ss~t~~g~~l~~~~~~~~~~G~l~~e~l~~~l~e~------~i~llIDATH 75 (257)
T COG2099 11 TSDARALAKKLAAAPVDIILSSLTGYGAKLAEQIGPVRVGGFLGAEGLAAFLREE------GIDLLIDATH 75 (257)
T ss_pred cHHHHHHHHHhhccCccEEEEEcccccccchhccCCeeecCcCCHHHHHHHHHHc------CCCEEEECCC
Confidence 34555566665554433333333322 22335688999999999 9999999988
No 419
>PLN03013 cysteine synthase
Probab=39.80 E-value=1.5e+02 Score=29.52 Aligned_cols=53 Identities=21% Similarity=0.142 Sum_probs=37.9
Q ss_pred ceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEecc
Q 014163 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (429)
Q Consensus 120 ~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~ 184 (429)
.+-.++|..++-+|+.+... |. +-.|++|+.+...-...++.+|++++.++-+
T Consensus 178 VVeaSSGN~G~ALA~~a~~~---------G~---~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~ 230 (429)
T PLN03013 178 LVEPTSGNTGIGLAFIAASR---------GY---RLILTMPASMSMERRVLLKAFGAELVLTDPA 230 (429)
T ss_pred EEEECCcHHHHHHHHHHHHc---------CC---CEEEEECCCCcHHHHHHHHHcCCEEEEECCC
Confidence 45556777787767666543 21 2377888888877888889999999988643
No 420
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=36.99 E-value=2.6e+02 Score=27.44 Aligned_cols=66 Identities=12% Similarity=0.122 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCC----CCHHHHHHHHHHHHhccCceecccCC
Q 014163 338 EGYKNIMENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSA----HTVFEISEGLRKKLNRFQVVYPQKLP 411 (429)
Q Consensus 338 ~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~----~~~~~~~~~L~~~l~~~G~~~~~~~~ 411 (429)
.-++..++....+..++.+.+.+.-+ +.+. ..++.-+.+++..+ -.+-.+.++|+ +.|..+..|-|
T Consensus 282 ~ll~avv~vN~~qk~~~~~~i~~~~~--l~Gk--~iavlgLafKpnTDD~ReSpa~~vi~~L~----~~Ga~V~aYDP 351 (414)
T COG1004 282 NLLEAVVEVNERRKDKLAEKILNHLG--LKGK--TIAVLGLAFKPNTDDMRESPALDIIKRLQ----EKGAEVIAYDP 351 (414)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC--CCCc--EEEEEEEeecCCCccchhchHHHHHHHHH----HCCCEEEEECc
Confidence 34566677777777788888876643 3222 45666666665321 23444555555 99998887644
No 421
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=36.82 E-value=83 Score=28.75 Aligned_cols=27 Identities=22% Similarity=0.351 Sum_probs=23.4
Q ss_pred cccccChHHHHHHHHHhhhccCCCccEEeeccc
Q 014163 215 TGEFEDVKLLHDLLTKKNEETGWDTPIHVDAAS 247 (429)
Q Consensus 215 tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~ 247 (429)
.|.+.+.+++.++++++ ++-+++|+.|
T Consensus 48 ~G~l~~~~~l~~~l~~~------~i~~VIDATH 74 (248)
T PRK08057 48 VGGFGGAEGLAAYLREE------GIDLVIDATH 74 (248)
T ss_pred ECCCCCHHHHHHHHHHC------CCCEEEECCC
Confidence 46666789999999999 9999999988
No 422
>cd06305 PBP1_methylthioribose_binding_like Methylthioribose-binding protein-like of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein (PBP1) superfamily. Methylthioribose-binding protein-like of ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein (PBP1) superfamily, which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding. The sugar-binding domain of the periplasmic proteins in this group is also homologous to the ligand-binding domain of eukaryotic receptors such as metabotropic glutamate receptor (mGluR), DNA-binding transcriptional repressors such as LacI and GalR.
Probab=35.51 E-value=1.7e+02 Score=26.33 Aligned_cols=67 Identities=9% Similarity=0.001 Sum_probs=37.1
Q ss_pred HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccE-Eeec
Q 014163 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPI-HVDA 245 (429)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l-~vD~ 245 (429)
+.++++..|..+..+....+ .....+.++..+..+...|++..++.. ...++.+.+++. ++++ .+|.
T Consensus 21 i~~~~~~~g~~~~~~~~~~~-~~~~~~~l~~~~~~~vdgii~~~~~~~-----~~~~~i~~~~~~------~ipvV~~~~ 88 (273)
T cd06305 21 TKAEAEALGGDLRVYDAGGD-DAKQADQIDQAIAQKVDAIIIQHGRAE-----VLKPWVKRALDA------GIPVVAFDV 88 (273)
T ss_pred HHHHHHHcCCEEEEECCCCC-HHHHHHHHHHHHHcCCCEEEEecCChh-----hhHHHHHHHHHc------CCCEEEecC
Confidence 55667778888877654322 122234556666667777776554321 123344456667 7654 4454
No 423
>PF04309 G3P_antiterm: Glycerol-3-phosphate responsive antiterminator; InterPro: IPR006699 Glycerol enters bacterial cells via facilitated diffusion, an energy-independent transport process catalysed by the glycerol transport facilitator GlpF, an integral membrane protein of the aquaporin family. Intracellular glycerol is usually converted to glycerol-3-P in an ATP-requiring phosphorylation reaction catalysed by glycerol kinase (GlpK). Glycerol-3-P, the inducer of the glpFK operon, is not a substrate for GlpF and hence remains entrapped in the cell where it is metabolized further. In some bacterial species, for example Bacillus firmus, glycerol-3-P activates the antiterminator GlpP []. In B. subtilis, glpF and glpK are organised in an operon followed by the glycerol-3-P dehydrogenase-encoding glpD gene and preceded by glpP coding for an antiterminator regulating the expression of glpFK, glpD and glpTQ. Their induction requires the inducer glycerol-3-P, which activates the antiterminator GlpP by allowing it to bind to the leader region of glpD and presumably also of glpFK and glpTQ mRNAs.; GO: 0006355 regulation of transcription, DNA-dependent, 0009607 response to biotic stimulus; PDB: 1VKF_A 3KTS_G.
Probab=34.91 E-value=9.5 Score=32.71 Aligned_cols=47 Identities=15% Similarity=0.241 Sum_probs=33.7
Q ss_pred HHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeeccccc
Q 014163 194 KAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (429)
Q Consensus 194 ~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~ 249 (429)
+|+++++.+...|++.. |.+..++++.+.++++++ -+++|+|-..|.
T Consensus 11 ~l~~al~s~~~~vfLl~-----g~I~~l~~~v~~~~~~gK----~vfVHiDli~Gl 57 (175)
T PF04309_consen 11 DLEKALESDVEVVFLLT-----GDIGNLKDIVKRLKAAGK----KVFVHIDLIEGL 57 (175)
T ss_dssp CCCCCCCSSSSEEEE-S-----EECCCHHHHHHHHHHTT-----EEEEECCGEETB
T ss_pred HHHHHHcCCCCEEEEEc-----CcHHHHHHHHHHHHHcCC----EEEEEehhcCCC
Confidence 35566666666666544 667799999999999943 579999988773
No 424
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=33.52 E-value=1.4e+02 Score=30.45 Aligned_cols=70 Identities=9% Similarity=-0.174 Sum_probs=48.3
Q ss_pred HHhcC-ceeEEEeccCCccccCHHHHHHHhhh-CCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccc
Q 014163 171 ARYFE-VELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASG 248 (429)
Q Consensus 171 ~~~~G-~~v~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~ 248 (429)
++..| .+|..++... ..++.+++.+.+.+ ++.+|.++.- |.......++++.+|+. .+++.+++=|.|.
T Consensus 32 L~~~G~~~V~iiD~~~--~~~~~~~~~~~l~~~~pdvVgis~~---t~~~~~a~~~~~~~k~~----~P~~~iV~GG~h~ 102 (497)
T TIGR02026 32 LLDAGYHDVTFLDAMT--GPLTDEKLVERLRAHCPDLVLITAI---TPAIYIACETLKFARER----LPNAIIVLGGIHP 102 (497)
T ss_pred HHhcCCcceEEecccc--cCCCHHHHHHHHHhcCcCEEEEecC---cccHHHHHHHHHHHHHH----CCCCEEEEcCCCc
Confidence 45567 5788887653 35788888888765 6777766543 33455667788888876 2289999888875
Q ss_pred c
Q 014163 249 G 249 (429)
Q Consensus 249 ~ 249 (429)
-
T Consensus 103 t 103 (497)
T TIGR02026 103 T 103 (497)
T ss_pred C
Confidence 3
No 425
>PF00403 HMA: Heavy-metal-associated domain; InterPro: IPR006121 Proteins that transport heavy metals in micro-organisms and mammals share similarities in their sequences and structures. These proteins provide an important focus for research, some being involved in bacterial resistance to toxic metals, such as lead and cadmium, while others are involved in inherited human syndromes, such as Wilson's and Menke's diseases []. A conserved domain has been found in a number of these heavy metal transport or detoxification proteins []. The domain, which has been termed Heavy-Metal-Associated (HMA), contains two conserved cysteines that are probably involved in metal binding. Structure solution of the fourth HMA domain of the Menke's copper transporting ATPase shows a well-defined structure comprising a four-stranded antiparallel beta-sheet and two alpha helices packed in an alpha-beta sandwich fold []. This fold is common to other domains and is classified as "ferredoxin-like".; GO: 0046872 metal ion binding, 0030001 metal ion transport; PDB: 2VOY_A 1P6T_A 1KQK_A 2RML_A 1JWW_A 3K7R_F 1FES_A 1CC8_A 1FD8_A 2GGP_A ....
Probab=32.91 E-value=1.5e+02 Score=19.82 Aligned_cols=52 Identities=15% Similarity=0.215 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCc
Q 014163 348 MGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQV 404 (429)
Q Consensus 348 ~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~ 404 (429)
...++.+.+.|.+++|+.-+.-....+.+.+.+.++ ..+..++.+.+. +.|+
T Consensus 10 ~~C~~~v~~~l~~~~GV~~v~vd~~~~~v~v~~~~~-~~~~~~i~~~i~----~~Gy 61 (62)
T PF00403_consen 10 EGCAKKVEKALSKLPGVKSVKVDLETKTVTVTYDPD-KTSIEKIIEAIE----KAGY 61 (62)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEETTTTEEEEEESTT-TSCHHHHHHHHH----HTTS
T ss_pred HHHHHHHHHHHhcCCCCcEEEEECCCCEEEEEEecC-CCCHHHHHHHHH----HhCc
Confidence 345678889999999986443222456777777654 356777777777 7774
No 426
>cd06535 CIDE_N_CAD CIDE_N domain of CAD nuclease. The CIDE_N (cell death-inducing DFF45-like effector, N-terminal) domain is found at the N-terminus of CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of CAD/DFF40 and ICAD/DFF45 during apoptosis. In normal cells, DFF exists in the nucleus as a heterodimer composed of CAD/DFF40 as a latent nuclease and its chaperone and inhibitor subunit ICAD/DFF45. Apoptotic activation of caspase-3 results in the cleavage of DFF45/ICAD and the release of active DFF40/CAD nuclease.
Probab=30.37 E-value=1.2e+02 Score=22.03 Aligned_cols=50 Identities=18% Similarity=0.098 Sum_probs=35.1
Q ss_pred HHHHHHHhcCce--eEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccc
Q 014163 166 CWEKFARYFEVE--LKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTG 216 (429)
Q Consensus 166 s~~~~~~~~G~~--v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG 216 (429)
-..++++.+.+. ...|-+++|+..++ |+.-..+.++|.++++.-+..-+|
T Consensus 26 L~~K~~~~l~l~~~~~~l~L~eDGTeVt-EeyF~tLp~nT~lmvL~~gq~W~g 77 (77)
T cd06535 26 LLRKGCRLLQLPCAGSRLCLYEDGTEVT-EEYFPTLPDNTELVLLTPGQSWQG 77 (77)
T ss_pred HHHHHHHHhCCCCCCcEEEEecCCcEeh-HHHHhcCCCCcEEEEEcCCCccCC
Confidence 466777777765 23444555545777 888899999999998887765544
No 427
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=30.18 E-value=3.4e+02 Score=25.22 Aligned_cols=53 Identities=19% Similarity=0.081 Sum_probs=34.4
Q ss_pred ceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEecc
Q 014163 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (429)
Q Consensus 120 ~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~ 184 (429)
.+..++|..+.-+|..+... |. +-.|+++...-..-....+.+|+++..++-+
T Consensus 56 vv~~SsGN~g~alA~~a~~~---------G~---~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~ 108 (291)
T cd01561 56 IIEPTSGNTGIGLAMVAAAK---------GY---RFIIVMPETMSEEKRKLLRALGAEVILTPEA 108 (291)
T ss_pred EEEeCCChHHHHHHHHHHHc---------CC---eEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 34455666666555544322 11 2377888877777777888999999888743
No 428
>PRK08329 threonine synthase; Validated
Probab=30.11 E-value=3.7e+02 Score=25.85 Aligned_cols=52 Identities=19% Similarity=0.080 Sum_probs=34.8
Q ss_pred ceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEec
Q 014163 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (429)
Q Consensus 120 ~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~ 183 (429)
.+..++|..+.-+|..++.. |. +..|++|...-..-....+.+|++++.++-
T Consensus 107 vv~aSsGN~g~alA~~aa~~---------G~---~~~v~vp~~~~~~k~~~~~~~GA~v~~v~~ 158 (347)
T PRK08329 107 VVIDSSGNAALSLALYSLSE---------GI---KVHVFVSYNASKEKISLLSRLGAELHFVEG 158 (347)
T ss_pred EEEECCCcHHHHHHHHHHHc---------CC---cEEEEECCCChHHHHHHHHHcCCEEEEECC
Confidence 55556677776666665543 21 247788877655566677889999988874
No 429
>cd06282 PBP1_GntR_like_2 Ligand-binding domain of putative DNA transcription repressors highly similar to that of the repressor specific for gluconate (GntR) which is a member of the LacI-GalR family of bacterial transcription regulators. This group includes the ligand-binding domain of putative DNA transcription repressors highly similar to that of the repressor specific for gluconate (GntR) which is a member of the LacI-GalR family of bacterial transcription regulators. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding
Probab=29.80 E-value=2.7e+02 Score=24.73 Aligned_cols=63 Identities=13% Similarity=0.015 Sum_probs=35.9
Q ss_pred HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEE
Q 014163 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIH 242 (429)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~ 242 (429)
+..+++..|..+...+.+.+ ..-..+.++.++..+...|++...+ +. . .+..+.+++. +++++
T Consensus 21 i~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~l~~~~vdgiii~~~~-~~----~-~~~~~~~~~~------~ipvV 83 (266)
T cd06282 21 IQEEARAAGYSLLLATTDYD-AEREADAVETLLRQRVDGLILTVAD-AA----T-SPALDLLDAE------RVPYV 83 (266)
T ss_pred HHHHHHHCCCEEEEeeCCCC-HHHHHHHHHHHHhcCCCEEEEecCC-CC----c-hHHHHHHhhC------CCCEE
Confidence 45667778888887765432 1222344555556667777664433 21 1 2355667777 88754
No 430
>PLN02565 cysteine synthase
Probab=29.44 E-value=2.9e+02 Score=26.29 Aligned_cols=52 Identities=21% Similarity=0.098 Sum_probs=36.5
Q ss_pred ceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEec
Q 014163 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (429)
Q Consensus 120 ~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~ 183 (429)
.+-.++|..+.-+|..+... |. +-.|++|+.+-..-...++.+|++++.++-
T Consensus 70 vv~aSsGN~g~alA~~a~~~---------G~---~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 121 (322)
T PLN02565 70 LIEPTSGNTGIGLAFMAAAK---------GY---KLIITMPASMSLERRIILLAFGAELVLTDP 121 (322)
T ss_pred EEEECCChHHHHHHHHHHHc---------CC---eEEEEeCCCCcHHHHHHHHHcCCEEEEeCC
Confidence 34456788887666655432 11 236778888777888889999999988764
No 431
>cd06319 PBP1_ABC_sugar_binding_like_10 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Probab=29.36 E-value=2.4e+02 Score=25.40 Aligned_cols=65 Identities=11% Similarity=0.060 Sum_probs=37.1
Q ss_pred HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEe
Q 014163 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (429)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~v 243 (429)
+...++..|..+..+....+ ..-..+.++..+..+...+++... .. +...+..+.+++. ++++++
T Consensus 21 i~~~~~~~g~~~~~~~~~~~-~~~~~~~i~~~~~~~~dgiii~~~-~~----~~~~~~l~~~~~~------~ipvV~ 85 (277)
T cd06319 21 VKSKAKALGYDAVELSAENS-AKKELENLRTAIDKGVSGIIISPT-NS----SAAVTLLKLAAQA------KIPVVI 85 (277)
T ss_pred HHHHHHhcCCeEEEecCCCC-HHHHHHHHHHHHhcCCCEEEEcCC-ch----hhhHHHHHHHHHC------CCCEEE
Confidence 44556677888876654322 222345566666667777665432 21 1244556777778 876653
No 432
>COG1606 ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only]
Probab=29.30 E-value=2.7e+02 Score=25.53 Aligned_cols=96 Identities=17% Similarity=0.188 Sum_probs=55.0
Q ss_pred ceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEE---cCCCch----HHHHHHHhcCceeEEEeccCCccccCH
Q 014163 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVT---GANVQV----CWEKFARYFEVELKEVKLEEGYYVMNP 192 (429)
Q Consensus 120 ~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~---~~~~h~----s~~~~~~~~G~~v~~v~~~~~~~~~d~ 192 (429)
.+.-+||..+..++..+.-.- | ...+.+ ++.... -....|+..|++..+++++. |++
T Consensus 21 ~vAfSGGvDSslLa~la~~~l--------G----~~v~AvTv~sP~~p~~e~e~A~~~A~~iGi~H~~i~~~~----~~~ 84 (269)
T COG1606 21 VVAFSGGVDSSLLAKLAKEAL--------G----DNVVAVTVDSPYIPRREIEEAKNIAKEIGIRHEFIKMNR----MDP 84 (269)
T ss_pred EEEecCCccHHHHHHHHHHHh--------c----cceEEEEEecCCCChhhhhHHHHHHHHhCCcceeeehhh----cch
Confidence 666779999888777664331 1 122222 322221 23445677899999998753 442
Q ss_pred HHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecccc
Q 014163 193 VKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASG 248 (429)
Q Consensus 193 ~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~ 248 (429)
+--+.. . + ++ +...-.=.+.|.+.++++ |.-+++||+-+
T Consensus 85 ~~~~n~-~-~-rC--------Y~CK~~v~~~l~~~a~~~------Gyd~V~dGtNa 123 (269)
T COG1606 85 EFKENP-E-N-RC--------YLCKRAVYSTLVEEAEKR------GYDVVADGTNA 123 (269)
T ss_pred hhccCC-C-C-cc--------hHHHHHHHHHHHHHHHHc------CCCEEEeCCcH
Confidence 211110 0 0 10 112223367788899999 99999999875
No 433
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=28.84 E-value=3.7e+02 Score=25.09 Aligned_cols=52 Identities=21% Similarity=0.156 Sum_probs=36.5
Q ss_pred ceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEec
Q 014163 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (429)
Q Consensus 120 ~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~ 183 (429)
.+-.++|..+.-+|..+... |. +-.|++|+..-..-....+.+|++++.++-
T Consensus 60 vv~aSsGN~g~alA~~a~~~---------Gl---~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~ 111 (298)
T TIGR01139 60 IVEPTSGNTGIALAMVAAAR---------GY---KLILTMPETMSIERRKLLKAYGAELVLTPG 111 (298)
T ss_pred EEEeCCChhHHHHHHHHHHc---------CC---eEEEEeCCccCHHHHHHHHHcCCEEEEECC
Confidence 45556777777666655432 21 247888888777777788999999998874
No 434
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=28.68 E-value=89 Score=28.57 Aligned_cols=27 Identities=22% Similarity=0.348 Sum_probs=23.9
Q ss_pred cccccChHHHHHHHHHhhhccCCCccEEeeccc
Q 014163 215 TGEFEDVKLLHDLLTKKNEETGWDTPIHVDAAS 247 (429)
Q Consensus 215 tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~ 247 (429)
.|..-+.+++.++++++ ++-.++|+.|
T Consensus 49 ~G~lg~~~~l~~~l~~~------~i~~vIDATH 75 (249)
T PF02571_consen 49 VGRLGDEEGLAEFLREN------GIDAVIDATH 75 (249)
T ss_pred ECCCCCHHHHHHHHHhC------CCcEEEECCC
Confidence 45665789999999999 9999999988
No 435
>cd06300 PBP1_ABC_sugar_binding_like_1 Periplasmic sugar-binding component of uncharacterized ABC-type transport systems that are members of the pentose/hexose sugar-binding protein family of the type I periplasmic binding protein superfamily. Periplasmic sugar-binding component of uncharacterized ABC-type transport systems that are members of the pentose/hexose sugar-binding protein family of the type I periplasmic binding protein superfamily, which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding. Members of this group are predicted to be involved in the transport of sugar-containing molecules across cellular and organellar membranes; however their substrate specificity is not known in detail.
Probab=28.60 E-value=2.3e+02 Score=25.45 Aligned_cols=67 Identities=7% Similarity=0.045 Sum_probs=36.7
Q ss_pred HHHHHHhc---Ccee--EEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccE
Q 014163 167 WEKFARYF---EVEL--KEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPI 241 (429)
Q Consensus 167 ~~~~~~~~---G~~v--~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l 241 (429)
+..+++.+ |.++ ...+.+.+ ..-..+.++..+..+...|++...... .+.+..+.+++. ++++
T Consensus 21 i~~~~~~~~~~g~~~~l~i~~~~~~-~~~~~~~~~~~~~~~vdgiIi~~~~~~-----~~~~~l~~~~~~------~iPv 88 (272)
T cd06300 21 FKAQAKELKKAGLISEFIVTSADGD-VAQQIADIRNLIAQGVDAIIINPASPT-----ALNPVIEEACEA------GIPV 88 (272)
T ss_pred HHHHHHhhhccCCeeEEEEecCCCC-HHHHHHHHHHHHHcCCCEEEEeCCChh-----hhHHHHHHHHHC------CCeE
Confidence 45566667 7643 44433322 222345666666677777777553221 234455667777 8766
Q ss_pred Ee-ec
Q 014163 242 HV-DA 245 (429)
Q Consensus 242 ~v-D~ 245 (429)
++ |.
T Consensus 89 v~~~~ 93 (272)
T cd06300 89 VSFDG 93 (272)
T ss_pred EEEec
Confidence 64 53
No 436
>smart00642 Aamy Alpha-amylase domain.
Probab=28.57 E-value=46 Score=28.27 Aligned_cols=30 Identities=23% Similarity=0.252 Sum_probs=26.8
Q ss_pred ccccccChHHHHHHHHHhhhccCCCccEEeeccccc
Q 014163 214 LTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (429)
Q Consensus 214 ~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~ 249 (429)
..|..++++++++-||++ |+.+++|-+.-+
T Consensus 65 ~~Gt~~d~~~lv~~~h~~------Gi~vilD~V~NH 94 (166)
T smart00642 65 RFGTMEDFKELVDAAHAR------GIKVILDVVINH 94 (166)
T ss_pred ccCCHHHHHHHHHHHHHC------CCEEEEEECCCC
Confidence 458889999999999999 999999998765
No 437
>TIGR01275 ACC_deam_rel pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family. This model represents a family of pyridoxal phosphate-dependent enzymes closely related to (and often designated as putative examples of) 1-aminocyclopropane-1-carboxylate deaminase. It appears that members of this family include both D-cysteine desulfhydrase (EC 4.4.1.15) and 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7).
Probab=28.11 E-value=1.4e+02 Score=28.06 Aligned_cols=55 Identities=16% Similarity=0.053 Sum_probs=31.4
Q ss_pred ceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCc-hHHHHHHHhcCceeEEEec
Q 014163 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQ-VCWEKFARYFEVELKEVKL 183 (429)
Q Consensus 120 ~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h-~s~~~~~~~~G~~v~~v~~ 183 (429)
.+++.|++.+|+..-.++..+. .|. +..|+++.... ......++.+|++++.++-
T Consensus 58 ~vv~~g~ssGN~g~alA~~a~~------~G~---~~~ivvp~~~~~~~~~~~~~~~Ga~v~~v~~ 113 (311)
T TIGR01275 58 TVITVGAIQSNHARATALAAKK------LGL---DAVLVLREKEELNGNLLLDKLMGAETRVYSA 113 (311)
T ss_pred EEEEcCCchhHHHHHHHHHHHH------hCC---ceEEEecCCccCCCCHHHHHHcCCEEEEECc
Confidence 5778777666665333332221 121 24677776432 2234456889999988874
No 438
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=27.63 E-value=44 Score=31.03 Aligned_cols=34 Identities=24% Similarity=0.241 Sum_probs=29.6
Q ss_pred eCCCccccccChHHHHHHHHHhhhccCCCccEEeeccccc
Q 014163 210 LGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (429)
Q Consensus 210 ~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~ 249 (429)
......|+.++++++++.|+++ |+.|++|-+.-+
T Consensus 43 ~vd~~~Gt~~d~~~Lv~~~h~~------gi~VilD~V~NH 76 (316)
T PF00128_consen 43 AVDPRFGTMEDFKELVDAAHKR------GIKVILDVVPNH 76 (316)
T ss_dssp EESTTTBHHHHHHHHHHHHHHT------TCEEEEEEETSE
T ss_pred ccccccchhhhhhhhhhccccc------cceEEEeeeccc
Confidence 4556679999999999999999 999999998754
No 439
>cd01542 PBP1_TreR_like Ligand-binding domain of DNA transcription repressor specific for trehalose (TreR) which is a member of the LacI-GalR family of bacterial transcription regulators. Ligand-binding domain of DNA transcription repressor specific for trehalose (TreR) which is a member of the LacI-GalR family of bacterial transcription regulators. The ligand-binding domain of TreR is structurally homologous to the periplasmic sugar-binding domain of ABC-type transporters and both domains contain the type I periplasmic binding protein-like fold. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the type I periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding wh
Probab=27.53 E-value=3.3e+02 Score=24.16 Aligned_cols=63 Identities=6% Similarity=-0.056 Sum_probs=36.2
Q ss_pred HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEe
Q 014163 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (429)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~v 243 (429)
+..+++..|..+...+.+.+ -.-..+.+++.+..+...++++... . -..+.+.+++. ++++++
T Consensus 21 i~~~~~~~g~~~~~~~~~~~-~~~~~~~i~~l~~~~~dgii~~~~~-~------~~~~~~~~~~~------~ipvv~ 83 (259)
T cd01542 21 ILAALYENGYQMLLMNTNFS-IEKEIEALELLARQKVDGIILLATT-I------TDEHREAIKKL------NVPVVV 83 (259)
T ss_pred HHHHHHHCCCEEEEEeCCCC-HHHHHHHHHHHHhcCCCEEEEeCCC-C------CHHHHHHHhcC------CCCEEE
Confidence 55667778988877765432 2223455666666677777765332 1 13455566666 765543
No 440
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=27.26 E-value=4.2e+02 Score=26.31 Aligned_cols=80 Identities=15% Similarity=0.100 Sum_probs=52.0
Q ss_pred cEEEEcCCCchH-HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhh-CCeEEEEeeCCCc--------cccccChH--
Q 014163 155 PNIVTGANVQVC-WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTL--------TGEFEDVK-- 222 (429)
Q Consensus 155 ~~vi~~~~~h~s-~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~--------tG~~~~l~-- 222 (429)
+.+|++...-.. +..-++.+|+....+-+-. ..|++++.+.++. +|.++++-+-.|. .|.+.-++
T Consensus 122 ~vLYVsGEES~~QiklRA~RL~~~~~~l~l~a---Et~~e~I~~~l~~~~p~lvVIDSIQT~~s~~~~SapGsVsQVRe~ 198 (456)
T COG1066 122 KVLYVSGEESLQQIKLRADRLGLPTNNLYLLA---ETNLEDIIAELEQEKPDLVVIDSIQTLYSEEITSAPGSVSQVREV 198 (456)
T ss_pred cEEEEeCCcCHHHHHHHHHHhCCCccceEEeh---hcCHHHHHHHHHhcCCCEEEEeccceeecccccCCCCcHHHHHHH
Confidence 577777665543 5556788887655554433 3688888888875 5777666554442 36654443
Q ss_pred --HHHHHHHHhhhccCCCccEEe
Q 014163 223 --LLHDLLTKKNEETGWDTPIHV 243 (429)
Q Consensus 223 --~I~~la~~~~~~~~~~~~l~v 243 (429)
++..+||+. |++++.
T Consensus 199 t~~L~~~AK~~------~i~~fi 215 (456)
T COG1066 199 AAELMRLAKTK------NIAIFI 215 (456)
T ss_pred HHHHHHHHHHc------CCeEEE
Confidence 566788888 887664
No 441
>TIGR01536 asn_synth_AEB asparagine synthase (glutamine-hydrolyzing). This model describes the glutamine-hydrolysing asparagine synthase. A poorly conserved C-terminal extension was removed from the model. Bacterial members of the family tend to have a long, poorly conserved insert lacking from archaeal and eukaryotic sequences. Multiple isozymes have been demonstrated, such as in Bacillus subtilis. Long-branch members of the phylogenetic tree (which typically were also second or third candidate members from their genomes) were removed from the seed alignment and score below trusted cutoff.
Probab=27.19 E-value=6.1e+02 Score=25.45 Aligned_cols=127 Identities=17% Similarity=0.098 Sum_probs=65.4
Q ss_pred hHHHHHHHHHHHHHhhCCCCCCCCCCCceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEc-CCCch---HHH
Q 014163 93 TTELQNRCVNMIAHLFNTPVADDKTAVGVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTG-ANVQV---CWE 168 (429)
Q Consensus 93 ~~~le~~~~~~la~l~g~~~~~~~~~~~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~-~~~h~---s~~ 168 (429)
..++++.+.+.+++.+..+. ..++.-+||-.+..++..+.... .+ .+..--.+..+ ..... ...
T Consensus 235 ~e~l~~~l~~aV~~r~~~~~-----~vg~~LSGGlDSs~iaa~a~~~~--~~-----~~~~~~t~~~~~~~~~~E~~~A~ 302 (467)
T TIGR01536 235 VDELRSLLEDAVKRRLVADV-----PVGVLLSGGLDSSLVAAIARREA--PR-----GPVHTFSIGFEGSPDFDESPYAR 302 (467)
T ss_pred HHHHHHHHHHHHHHHhccCC-----ceEEEecCChhHHHHHHHHHHhc--CC-----CCceEEEEecCCCCCCChHHHHH
Confidence 34566666666665554322 24788899988877665543221 00 00000012222 12222 456
Q ss_pred HHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeeccc
Q 014163 169 KFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAAS 247 (429)
Q Consensus 169 ~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~ 247 (429)
..|+.+|++...+.+++++. .+.+.+.+...- .|... ....+.-.+++.++++ |+-++.+|--
T Consensus 303 ~vA~~lg~~~~~i~~~~~~~---~~~~~~~v~~~~------~p~~~-~~~~~~~~l~~~a~~~------G~~vlltG~G 365 (467)
T TIGR01536 303 KVADHLGTEHHEVLFSVEEG---LDALPEVIYHLE------DPTTI-RASIPLYLLSKLARED------GVKVVLSGEG 365 (467)
T ss_pred HHHHHhCCcCeEEECCHHHH---HHHHHHHHHhhC------CCCCC-chHHHHHHHHHHHHhc------CCEEEEecCc
Confidence 67888999988887654321 223333332100 11111 1122455778889999 9888887744
No 442
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=26.71 E-value=4.5e+02 Score=23.56 Aligned_cols=99 Identities=12% Similarity=-0.004 Sum_probs=60.0
Q ss_pred ceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCC-----ch----HHHHHHHhcCceeEEEeccCCcccc
Q 014163 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANV-----QV----CWEKFARYFEVELKEVKLEEGYYVM 190 (429)
Q Consensus 120 ~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~-----h~----s~~~~~~~~G~~v~~v~~~~~~~~~ 190 (429)
...-+||..+++.+.++... |..+..-..+.|+.. |. .....++.+|+++.....+.. ..-
T Consensus 4 ~aL~SGGKDS~~Al~~a~~~---------G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~-~e~ 73 (223)
T COG2102 4 IALYSGGKDSFYALYLALEE---------GHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGE-EER 73 (223)
T ss_pred EEEEecCcHHHHHHHHHHHc---------CCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCcc-chh
Confidence 56778999997755555533 322211122333332 21 355567889999888887642 345
Q ss_pred CHHHHHHHhhhCC-eEEEEeeCCCccccc---cChHHHHHHHHHhhhccCCCccE
Q 014163 191 NPVKAVELVDENT-ICVAAILGSTLTGEF---EDVKLLHDLLTKKNEETGWDTPI 241 (429)
Q Consensus 191 d~~~l~~~i~~~~-~~v~~~~~~~~tG~~---~~l~~I~~la~~~~~~~~~~~~l 241 (429)
..++|.++++.-. ..| .+|.+ .....+-.+|++- |+-+
T Consensus 74 eve~L~~~l~~l~~d~i-------v~GaI~s~yqk~rve~lc~~l------Gl~~ 115 (223)
T COG2102 74 EVEELKEALRRLKVDGI-------VAGAIASEYQKERVERLCEEL------GLKV 115 (223)
T ss_pred hHHHHHHHHHhCcccEE-------EEchhhhHHHHHHHHHHHHHh------CCEE
Confidence 6778888877522 222 13555 4577888999999 8754
No 443
>cd01538 PBP1_ABC_xylose_binding Periplasmic xylose-binding component of the ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein (PBP1) superfamily. Periplasmic xylose-binding component of the ABC-type transport systems that belong to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein (PBP1) superfamily, which consists of two alpha/beta globular domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes a transition from an open to a closed conformational state upon ligand binding. Moreover, the periplasmic xylose-binding protein is homologous to the ligand-binding domain of eukaryotic receptors such as glutamate receptor (GluR) and DNA-binding transcriptional repressors such as LacI and GalR.
Probab=26.46 E-value=3.2e+02 Score=24.99 Aligned_cols=64 Identities=6% Similarity=-0.008 Sum_probs=36.9
Q ss_pred HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEE
Q 014163 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIH 242 (429)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~ 242 (429)
+..+++..|..+..+....+ ..-..+.++.++..++..|++... +. +...++.+.+++. +++++
T Consensus 21 i~~~a~~~g~~~~~~~~~~~-~~~~~~~i~~~~~~~vdgiii~~~-~~----~~~~~~l~~l~~~------~ipvV 84 (288)
T cd01538 21 FEAALKELGAEVIVQNANGD-PAKQISQIENMIAKGVDVLVIAPV-DG----EALASAVEKAADA------GIPVI 84 (288)
T ss_pred HHHHHHHcCCEEEEECCCCC-HHHHHHHHHHHHHcCCCEEEEecC-Ch----hhHHHHHHHHHHC------CCCEE
Confidence 55667778888888766432 222345566666677877766532 22 1133455556666 77654
No 444
>COG3453 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=26.32 E-value=2.8e+02 Score=22.24 Aligned_cols=69 Identities=10% Similarity=0.014 Sum_probs=41.3
Q ss_pred CCCchHHHHHHHhcCceeEEEeccCCccccC---HHHHHHHhhh--CCeEEEEeeCCCccc-----cc---cChHHHHHH
Q 014163 161 ANVQVCWEKFARYFEVELKEVKLEEGYYVMN---PVKAVELVDE--NTICVAAILGSTLTG-----EF---EDVKLLHDL 227 (429)
Q Consensus 161 ~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d---~~~l~~~i~~--~~~~v~~~~~~~~tG-----~~---~~l~~I~~l 227 (429)
.|.+.+...+++.+|+...+||+... .++ ++.+.+++.+ .|.+...-+|+-.+- .. .+.++|..+
T Consensus 44 QP~~~~i~~aa~~aGl~y~~iPV~~~--~iT~~dV~~f~~Al~eaegPVlayCrsGtRs~~ly~~~~~~~gm~~de~~a~ 121 (130)
T COG3453 44 QPGFAAIAAAAEAAGLTYTHIPVTGG--GITEADVEAFQRALDEAEGPVLAYCRSGTRSLNLYGLGELDGGMSRDEIEAL 121 (130)
T ss_pred CCChHHHHHHHHhcCCceEEeecCCC--CCCHHHHHHHHHHHHHhCCCEEeeecCCchHHHHHHHHHHhcCCCHHHHHHH
Confidence 34556788889999999999998642 354 4455556664 455544444433221 11 345555555
Q ss_pred HHHh
Q 014163 228 LTKK 231 (429)
Q Consensus 228 a~~~ 231 (429)
.+.+
T Consensus 122 g~a~ 125 (130)
T COG3453 122 GQAA 125 (130)
T ss_pred HHhh
Confidence 5555
No 445
>cd06318 PBP1_ABC_sugar_binding_like_9 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Probab=26.09 E-value=3.5e+02 Score=24.37 Aligned_cols=67 Identities=12% Similarity=0.055 Sum_probs=36.7
Q ss_pred HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEE-eec
Q 014163 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIH-VDA 245 (429)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~-vD~ 245 (429)
+...++..|..+.....+.+ ..-..+.++..+..+...|++... .+ +-+.++.+.+++. +++++ +|.
T Consensus 21 i~~~~~~~g~~v~~~~~~~~-~~~~~~~i~~~~~~~~Dgiii~~~-~~----~~~~~~i~~~~~~------~iPvV~~~~ 88 (282)
T cd06318 21 AKAHAKALGYELISTDAQGD-LTKQIADVEDLLTRGVNVLIINPV-DP----EGLVPAVAAAKAA------GVPVVVVDS 88 (282)
T ss_pred HHHHHHHcCCEEEEEcCCCC-HHHHHHHHHHHHHcCCCEEEEecC-Cc----cchHHHHHHHHHC------CCCEEEecC
Confidence 55666778888876654322 122234566666667777766432 21 1123445556677 77554 554
No 446
>KOG0369 consensus Pyruvate carboxylase [Energy production and conversion]
Probab=26.03 E-value=70 Score=33.36 Aligned_cols=34 Identities=24% Similarity=0.273 Sum_probs=28.7
Q ss_pred CCCccccccChHHHHHHHHHhhhccCCCccEEeeccccccc
Q 014163 211 GSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGGFI 251 (429)
Q Consensus 211 ~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~~~ 251 (429)
|-|+ |-+...++-.++|++| |.+++.-+||||+.
T Consensus 164 PGTp-gPitt~~EA~eF~k~y------G~PvI~KAAyGGGG 197 (1176)
T KOG0369|consen 164 PGTP-GPITTVEEALEFVKEY------GLPVIIKAAYGGGG 197 (1176)
T ss_pred CCCC-CCcccHHHHHHHHHhc------CCcEEEeecccCCC
Confidence 3344 7777889999999999 99999999998764
No 447
>cd06322 PBP1_ABC_sugar_binding_like_12 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. This group includes the periplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily, which consist of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Probab=25.96 E-value=3e+02 Score=24.62 Aligned_cols=66 Identities=11% Similarity=0.069 Sum_probs=34.8
Q ss_pred HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccE-Eee
Q 014163 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPI-HVD 244 (429)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l-~vD 244 (429)
+..+++..|..+...+.+.+ .....+.++..+..+...+++... ++ +...+..+.+++. ++++ .+|
T Consensus 21 i~~~~~~~g~~~~i~~~~~~-~~~~~~~~~~~~~~~vdgiii~~~-~~----~~~~~~~~~~~~~------~ipvV~~~ 87 (267)
T cd06322 21 MKEEAKKQKVNLIVSIANQD-LNKQLSDVEDFITKKVDAIVLSPV-DS----KGIRAAIAKAKKA------GIPVITVD 87 (267)
T ss_pred HHHHHHhcCCEEEEecCCCC-HHHHHHHHHHHHHcCCCEEEEcCC-Ch----hhhHHHHHHHHHC------CCCEEEEc
Confidence 45556667888766554322 122234455566667777766432 21 1233444556667 7644 444
No 448
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional
Probab=25.82 E-value=5.1e+02 Score=24.91 Aligned_cols=22 Identities=18% Similarity=0.009 Sum_probs=17.3
Q ss_pred cChHHHHHHHHHhhhccCCCccEEeecc
Q 014163 219 EDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (429)
Q Consensus 219 ~~l~~I~~la~~~~~~~~~~~~l~vD~a 246 (429)
.-+.+.++.|+++ +++++.||-
T Consensus 200 tAV~~~a~~a~~~------gvpiIADGG 221 (346)
T PRK05096 200 SAVIECADAAHGL------GGQIVSDGG 221 (346)
T ss_pred HHHHHHHHHHHHc------CCCEEecCC
Confidence 4566677778888 999999984
No 449
>TIGR02634 xylF D-xylose ABC transporter, substrate-binding protein. Members of this family are periplasmic (when in Gram-negative bacteria) binding proteins for D-xylose import by a high-affinity ATP-binding cassette (ABC) transporter.
Probab=25.58 E-value=2.4e+02 Score=26.24 Aligned_cols=66 Identities=5% Similarity=-0.078 Sum_probs=38.0
Q ss_pred HHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEe
Q 014163 166 CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (429)
Q Consensus 166 s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~v 243 (429)
.+..+++..|..+...+.+.+ .....+.++..+..++..|+++..... ......+.+++. +++++.
T Consensus 19 ~i~~~a~~~g~~v~~~~~~~~-~~~q~~~i~~l~~~~vDgIIi~~~~~~-----~~~~~l~~~~~~------~iPvV~ 84 (302)
T TIGR02634 19 IFVAAAESLGAKVFVQSANGN-EAKQISQIENLIARGVDVLVIIPQNGQ-----VLSNAVQEAKDE------GIKVVA 84 (302)
T ss_pred HHHHHHHhcCCEEEEEeCCCC-HHHHHHHHHHHHHcCCCEEEEeCCChh-----HHHHHHHHHHHC------CCeEEE
Confidence 355566777888777655432 223345666666677777776543211 134555666777 776643
No 450
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic. A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences.
Probab=25.26 E-value=4.1e+02 Score=25.51 Aligned_cols=53 Identities=23% Similarity=0.093 Sum_probs=31.4
Q ss_pred ccCHHHHHHHhhhCCeEEEEe--eCCCc-----ccc----ccChHHHHHHHHHhhhccCCCccEEeeccc
Q 014163 189 VMNPVKAVELVDENTICVAAI--LGSTL-----TGE----FEDVKLLHDLLTKKNEETGWDTPIHVDAAS 247 (429)
Q Consensus 189 ~~d~~~l~~~i~~~~~~v~~~--~~~~~-----tG~----~~~l~~I~~la~~~~~~~~~~~~l~vD~a~ 247 (429)
-.+++..++++......|.+. .|++- +|. +.-+.++++.++++ +++++.|+-.
T Consensus 158 V~T~e~a~~Li~aGAD~ikVgiGpGSicttR~~~Gvg~pqltAv~~~a~aa~~~------~v~VIaDGGI 221 (343)
T TIGR01305 158 VVTGEMVEELILSGADIVKVGIGPGSVCTTRTKTGVGYPQLSAVIECADAAHGL------KGHIISDGGC 221 (343)
T ss_pred ccCHHHHHHHHHcCCCEEEEcccCCCcccCceeCCCCcCHHHHHHHHHHHhccC------CCeEEEcCCc
Confidence 567888888887655555443 22222 222 23444555555666 8999999844
No 451
>PRK05638 threonine synthase; Validated
Probab=24.86 E-value=7.1e+02 Score=24.88 Aligned_cols=51 Identities=14% Similarity=0.038 Sum_probs=35.1
Q ss_pred ceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEe
Q 014163 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVK 182 (429)
Q Consensus 120 ~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~ 182 (429)
.+..++|..+.-+|..++.. |. +-.|++|+..-.......+.+|++++.++
T Consensus 115 vv~aSsGN~g~alA~~aa~~---------G~---~~~i~vp~~~~~~k~~~~~~~GA~vi~v~ 165 (442)
T PRK05638 115 FIVASDGNAAASVAAYSARA---------GK---EAFVVVPRKVDKGKLIQMIAFGAKIIRYG 165 (442)
T ss_pred EEEeCCChHHHHHHHHHHHc---------CC---CEEEEEeCCCCHHHHHHHHhcCcEEEEEC
Confidence 45556677776666665543 21 23778888776667777888999998886
No 452
>PRK03910 D-cysteine desulfhydrase; Validated
Probab=24.72 E-value=2.7e+02 Score=26.55 Aligned_cols=56 Identities=16% Similarity=0.025 Sum_probs=32.5
Q ss_pred ceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCch--------HHHHHHHhcCceeEEEecc
Q 014163 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQV--------CWEKFARYFEVELKEVKLE 184 (429)
Q Consensus 120 ~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~--------s~~~~~~~~G~~v~~v~~~ 184 (429)
.++|+|++.+|...-.++..+. .|. +..|+++...-. .....++.+|++++.++-+
T Consensus 66 ~vvt~g~s~gN~g~alA~~a~~------~G~---~~~i~vp~~~~~~~~~~~~~~~~~~~~~~Ga~vi~~~~~ 129 (331)
T PRK03910 66 TLITAGAIQSNHARQTAAAAAK------LGL---KCVLLLENPVPTEAENYLANGNVLLDDLFGAEIHVVPAG 129 (331)
T ss_pred EEEEcCcchhHHHHHHHHHHHH------hCC---cEEEEEcCCCCcccccccCCCcHHHHHHcCCEEEEeCcc
Confidence 4668887666665333332221 121 236777765443 2235678899999888754
No 453
>cd01137 PsaA Metal binding protein PsaA. These proteins have been shown to function as initial receptors in ABC transport of Mn2+ and as surface adhesins in some eubacterial species. They belong to the TroA superfamily of periplasmic metal binding proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind the metal ion in the cleft between these domains. In addition, these proteins sometimes have a low complexity region containing a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=23.98 E-value=2.6e+02 Score=26.08 Aligned_cols=65 Identities=11% Similarity=0.175 Sum_probs=39.2
Q ss_pred CchHHHHHHHhcCceeEEEe-ccCCccccCHHHHHHHh---hh-CCeEEEEeeCCCccccccChHHHHHHHHHhhhccCC
Q 014163 163 VQVCWEKFARYFEVELKEVK-LEEGYYVMNPVKAVELV---DE-NTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGW 237 (429)
Q Consensus 163 ~h~s~~~~~~~~G~~v~~v~-~~~~~~~~d~~~l~~~i---~~-~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~ 237 (429)
.|.++...++.+|+++..+- ..++ ....+.+|.+.+ ++ +.++|+. .+..+. +.+..++++.
T Consensus 183 ~H~af~Y~~~~yGl~~~~~~~~~~~-~eps~~~l~~l~~~ik~~~v~~if~-e~~~~~------~~~~~ia~~~------ 248 (287)
T cd01137 183 SEGAFSYFAKAYGLKEAYLWPINTE-EEGTPKQVATLIEQVKKEKVPAVFV-ESTVND------RLMKQVAKET------ 248 (287)
T ss_pred ecccHHHHHHHcCCeEeecccCCCC-CCCCHHHHHHHHHHHHHhCCCEEEE-eCCCCh------HHHHHHHHHh------
Confidence 56777888899999976543 2222 456666665554 44 3455543 333332 4456778888
Q ss_pred CccE
Q 014163 238 DTPI 241 (429)
Q Consensus 238 ~~~l 241 (429)
|+.+
T Consensus 249 gv~v 252 (287)
T cd01137 249 GAKI 252 (287)
T ss_pred CCcc
Confidence 8764
No 454
>TIGR00177 molyb_syn molybdenum cofactor synthesis domain. The Drosophila protein cinnamon, the Arabidopsis protein cnx1, and rat protein gephyrin each have one domain like MoeA and one like MoaB and Mog. These domains are, however, distantly related to each other, as captured by this model. Gephyrin is unusual in that it seems to be a tubulin-binding neuroprotein involved in the clustering of both blycine receptors and GABA receptors, rather than a protein of molybdenum cofactor biosynthesis.
Probab=23.68 E-value=3.3e+02 Score=22.26 Aligned_cols=55 Identities=11% Similarity=0.076 Sum_probs=33.4
Q ss_pred hHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhh---CCeEEEEeeCCCccccccChHHH
Q 014163 165 VCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE---NTICVAAILGSTLTGEFEDVKLL 224 (429)
Q Consensus 165 ~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~---~~~~v~~~~~~~~tG~~~~l~~I 224 (429)
+.+...++..|+++....+-.+ |.+.+.+.+.+ +..+|+ +.|.+..|..|-..+.
T Consensus 30 ~~l~~~l~~~G~~v~~~~~v~D----d~~~i~~~l~~~~~~~DliI-ttGG~g~g~~D~t~~a 87 (144)
T TIGR00177 30 PLLAALLEEAGFNVSRLGIVPD----DPEEIREILRKAVDEADVVL-TTGGTGVGPRDVTPEA 87 (144)
T ss_pred HHHHHHHHHCCCeEEEEeecCC----CHHHHHHHHHHHHhCCCEEE-ECCCCCCCCCccHHHH
Confidence 3566677888999888775443 34555555443 345554 4466666777665543
No 455
>cd01615 CIDE_N CIDE_N domain, found at the N-terminus of the CIDE (cell death-inducing DFF45-like effector) proteins, as well as CAD nuclease (caspase-activated DNase/DNA fragmentation factor, DFF40) and its inhibitor, ICAD(DFF45). These proteins are associated with the chromatin condensation and DNA fragmentation events of apoptosis; the CIDE_N domain is thought to regulate the activity of ICAD/DFF45, and the CAD/DFF40 and CIDE nucleases during apoptosis. The CIDE-N domain is also found in the FSP27/CIDE-C protein.
Probab=23.61 E-value=2.5e+02 Score=20.54 Aligned_cols=51 Identities=14% Similarity=0.115 Sum_probs=36.6
Q ss_pred CchHHHHHHHhcCc--eeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCC
Q 014163 163 VQVCWEKFARYFEV--ELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGST 213 (429)
Q Consensus 163 ~h~s~~~~~~~~G~--~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~ 213 (429)
-.--..++++.+++ ....+-+.+++..+|-|+.-..+.++|.++++.-+..
T Consensus 23 L~eL~~K~~~~l~l~~~~~~lvL~eDGTeVddEeYF~tLp~nT~l~~l~~gq~ 75 (78)
T cd01615 23 LEELLSKACEKLKLPSAPVTLVLEEDGTEVDDEEYFQTLPDNTVLMLLEPGQK 75 (78)
T ss_pred HHHHHHHHHHHcCCCCCCeEEEEeCCCcEEccHHHHhcCCCCcEEEEECCCCC
Confidence 33346778888887 3444445555568888999999999999888776654
No 456
>COG2052 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.38 E-value=1.5e+02 Score=21.28 Aligned_cols=33 Identities=15% Similarity=0.186 Sum_probs=26.2
Q ss_pred eEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeeccccc
Q 014163 204 ICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (429)
Q Consensus 204 ~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~ 249 (429)
++|.+++|.+. |++.|..-|+.. |. ++|+.||-
T Consensus 18 RviaIVsPESa-----PiKRii~eArdr------~~--LIDATYGR 50 (89)
T COG2052 18 RVIAIVSPESA-----PIKRIIQEARDR------GM--LIDATYGR 50 (89)
T ss_pred eEEEEECCCcc-----cHHHHHHHHHhc------Cc--EEEcccCc
Confidence 56667777665 899999999988 64 56999984
No 457
>cd01575 PBP1_GntR Ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators. This group represents the ligand-binding domain of DNA transcription repressor GntR specific for gluconate, a member of the LacI-GalR family of bacterial transcription regulators. The ligand-binding domain of GntR is structurally homologous to the periplasmic sugar-binding domain of ABC-type transporters and both domains contain the type I periplasmic binding protein-like fold. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the type I periplasmic binding proteins. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding,
Probab=23.34 E-value=5.1e+02 Score=22.96 Aligned_cols=63 Identities=10% Similarity=-0.102 Sum_probs=35.3
Q ss_pred HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEe
Q 014163 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (429)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~v 243 (429)
+..+++..|..+...+.+.+ ..-..+.++.++..+...|++.... .. ....+.+++. ++++++
T Consensus 21 i~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~l~~~~vdgiii~~~~-~~------~~~~~~~~~~------~ipvv~ 83 (268)
T cd01575 21 ISDVLEAAGYQLLLGNTGYS-PEREEELLRTLLSRRPAGLILTGLE-HT------ERTRQLLRAA------GIPVVE 83 (268)
T ss_pred HHHHHHHcCCEEEEecCCCC-chhHHHHHHHHHHcCCCEEEEeCCC-CC------HHHHHHHHhc------CCCEEE
Confidence 55567778888877765432 1112344555666677777665432 21 3445556666 776653
No 458
>TIGR00096 probable S-adenosylmethionine-dependent methyltransferase, YraL family. No member of this family is characterized, but Pfam model pfam00590 (tetrapyrrole methylase) demonstrates homology between this family and its other members, which include several methylases for the tetrapyrrole class of compound, as well as the enzyme diphthine synthase.
Probab=23.17 E-value=6e+02 Score=23.63 Aligned_cols=81 Identities=4% Similarity=-0.102 Sum_probs=51.4
Q ss_pred cEEEEcCCCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhc
Q 014163 155 PNIVTGANVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEE 234 (429)
Q Consensus 155 ~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~ 234 (429)
..++..+.+..+ .+....+++.-..+.+.+.+..-..+.+.+.+...-.+.+++..-+| |.-||=..|...|++.
T Consensus 26 ~d~i~~EDTR~t-~kLL~~~~I~~~~~~~~~hn~~~~~~~l~~~l~~g~~valvSDAG~P-~ISDPG~~LV~~~~~~--- 100 (276)
T TIGR00096 26 VDLFAEEDTRTS-KLLLHLGIIATPKAFHIDNEFQEKQNLLAAKLEIGNNIAVSSDAGPP-LISDPGHLLVACREKA--- 100 (276)
T ss_pred CCEEEecCchhH-HHHHHhcCCCCceEEEecccHhHHHHHHHHHHHcCCcEEEEecCCCC-CcCCccHHHHHHHHHC---
Confidence 357777766643 44556678765555555433334455555555554334445555555 7889999999999999
Q ss_pred cCCCccEEe
Q 014163 235 TGWDTPIHV 243 (429)
Q Consensus 235 ~~~~~~l~v 243 (429)
|+.+++
T Consensus 101 ---~i~v~~ 106 (276)
T TIGR00096 101 ---NIIVVP 106 (276)
T ss_pred ---CCeEEc
Confidence 885544
No 459
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=23.13 E-value=6.4e+02 Score=23.79 Aligned_cols=100 Identities=11% Similarity=0.010 Sum_probs=62.0
Q ss_pred ceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEE--cCCCchH--HHHHHHhcCceeEEEeccCCccccCHHHH
Q 014163 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVT--GANVQVC--WEKFARYFEVELKEVKLEEGYYVMNPVKA 195 (429)
Q Consensus 120 ~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~--~~~~h~s--~~~~~~~~G~~v~~v~~~~~~~~~d~~~l 195 (429)
.+.|.+.|.+....+..+.++ |+ +-.|++ |.|.+.. ..+..+..|+++..|+-. ++
T Consensus 122 ~IlTh~~S~~v~~~l~~A~~~--------~k---~~~V~VtESRP~~eG~~~ak~L~~~gI~~~~I~Ds---------a~ 181 (301)
T COG1184 122 VILTHSFSKTVLEVLKTAADR--------GK---RFKVIVTESRPRGEGRIMAKELRQSGIPVTVIVDS---------AV 181 (301)
T ss_pred EEEEecCcHHHHHHHHHhhhc--------CC---ceEEEEEcCCCcchHHHHHHHHHHcCCceEEEech---------HH
Confidence 889999999999888888774 11 125555 5555543 445556678887777521 12
Q ss_pred HHHhhhCCeEEEEeeCCCccccc-cC--hHHHHHHHHHhhhccCCCccEEeec
Q 014163 196 VELVDENTICVAAILGSTLTGEF-ED--VKLLHDLLTKKNEETGWDTPIHVDA 245 (429)
Q Consensus 196 ~~~i~~~~~~v~~~~~~~~tG~~-~~--l~~I~~la~~~~~~~~~~~~l~vD~ 245 (429)
...+++-.+.++-...-...|.+ +. -..|+..||+. +.++.|=+
T Consensus 182 ~~~~~~vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e~------~~Pf~v~a 228 (301)
T COG1184 182 GAFMSRVDKVLVGADAILANGALVNKIGTSPLALAAREL------RVPFYVVA 228 (301)
T ss_pred HHHHHhCCEEEECccceecCCcEEeccchHHHHHHHHHh------CCCEEEEe
Confidence 33344434555555555555544 22 35688889999 99887543
No 460
>PRK00685 metal-dependent hydrolase; Provisional
Probab=23.03 E-value=5.2e+02 Score=22.66 Aligned_cols=75 Identities=12% Similarity=0.112 Sum_probs=46.2
Q ss_pred EEEEcCCC-ch-HHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhh-CCeEEEEeeCCCccccccChHHHHHHHHHh
Q 014163 156 NIVTGANV-QV-CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDE-NTICVAAILGSTLTGEFEDVKLLHDLLTKK 231 (429)
Q Consensus 156 ~vi~~~~~-h~-s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~-~~~~v~~~~~~~~tG~~~~l~~I~~la~~~ 231 (429)
.++++..+ +. ......+..++++..+|+.. .+.+++++..+.... +++.++.+|-.+......+.+++.+.+++.
T Consensus 136 ~i~~~GDt~~~~~~~~~~~~~~~D~~~~~~~~-~~h~~~~ea~~~~~~~~~k~~v~~H~~~~~~~~~~~~~~~~~~~~~ 213 (228)
T PRK00685 136 TIYHAGDTGLFSDMKLIGELHKPDVALLPIGD-NFTMGPEDAALAVELIKPKIVIPMHYNTFPLIEQDPEKFKALVEGL 213 (228)
T ss_pred EEEEecCccchhHHHHHHHhhCCCEEEEecCC-ccccCHHHHHHHHHhhCCCEEEEeccCCCcCCcCCHHHHHHHHHhc
Confidence 45544433 32 23334444577777777653 257888887666654 677788888765443345677877777765
No 461
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=23.01 E-value=6e+02 Score=23.38 Aligned_cols=102 Identities=15% Similarity=0.018 Sum_probs=52.2
Q ss_pred ceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcC--CCchH--HHHHHHhcCceeEEEeccCCccccCHHHH
Q 014163 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGA--NVQVC--WEKFARYFEVELKEVKLEEGYYVMNPVKA 195 (429)
Q Consensus 120 ~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~--~~h~s--~~~~~~~~G~~v~~v~~~~~~~~~d~~~l 195 (429)
.+.|.|-+..+...+..+... | .+-.|++.+ |.... +.+.....|+++..++-.. +
T Consensus 110 ~ILT~~~S~~v~~~l~~a~~~--------~---~~~~V~v~es~P~~eG~~~a~~L~~~gi~v~~i~d~~---------~ 169 (282)
T PF01008_consen 110 TILTHGYSSTVERFLLSAKKK--------G---KKFRVIVLESRPYNEGRLMAKELAEAGIPVTLIPDSA---------V 169 (282)
T ss_dssp EEEEES--SHHHHHHHHHHHT--------T---EEEEEEEE--TTTTHHHTHHHHHHHTT-EEEEE-GGG---------H
T ss_pred EEEEeCCchHHHHHHHHHHHc--------C---CeEEEEEccCCcchhhhhHHHHhhhcceeEEEEechH---------H
Confidence 778888888877777765441 1 123566644 33333 3333344688888887321 2
Q ss_pred HHHhhh-CCeEEEEeeCCCccccc-cC--hHHHHHHHHHhhhccCCCccEEeeccc
Q 014163 196 VELVDE-NTICVAAILGSTLTGEF-ED--VKLLHDLLTKKNEETGWDTPIHVDAAS 247 (429)
Q Consensus 196 ~~~i~~-~~~~v~~~~~~~~tG~~-~~--l~~I~~la~~~~~~~~~~~~l~vD~a~ 247 (429)
-..+.. -.+.++....-...|.+ .. -..|+-+|+++ +++++|=+-.
T Consensus 170 ~~~m~~~vd~VliGad~v~~nG~v~nk~Gt~~~a~~Ak~~------~vPv~v~~~~ 219 (282)
T PF01008_consen 170 GYVMPRDVDKVLIGADAVLANGGVVNKVGTLQLALAAKEF------NVPVYVLAES 219 (282)
T ss_dssp HHHHHCTESEEEEE-SEEETTS-EEEETTHHHHHHHHHHT------T-EEEEE--G
T ss_pred HHHHHHhCCeeEEeeeEEecCCCEeehhhHHHHHHHHHhh------CCCEEEEccc
Confidence 333333 33444444444455643 32 45778889999 9998876543
No 462
>PF00532 Peripla_BP_1: Periplasmic binding proteins and sugar binding domain of LacI family; InterPro: IPR001761 This family includes the periplasmic binding proteins, and the LacI family transcriptional regulators. The periplasmic binding proteins are the primary receptors for chemotaxis and transport of many sugar based solutes. The LacI family of proteins consist of transcriptional regulators related to the lac repressor. In this case, generally the sugar binding domain binds a sugar which changes the DNA binding activity of the repressor domain (lacI) [, ].; PDB: 1BAP_A 7ABP_A 6ABP_A 1ABF_A 5ABP_A 2WRZ_B 9ABP_A 1APB_A 1ABE_A 8ABP_A ....
Probab=22.79 E-value=4.3e+02 Score=24.31 Aligned_cols=77 Identities=12% Similarity=-0.017 Sum_probs=46.9
Q ss_pred EEEEcCCCch-------HHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHH
Q 014163 156 NIVTGANVQV-------CWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLL 228 (429)
Q Consensus 156 ~vi~~~~~h~-------s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la 228 (429)
-|++|+..++ .+.+.++..|..+..+..+.+ .... +.++..++.+...++++.. .. +.+.|..+.
T Consensus 5 Gvivp~~~npff~~ii~gIe~~a~~~Gy~l~l~~t~~~-~~~e-~~i~~l~~~~vDGiI~~s~-~~-----~~~~l~~~~ 76 (279)
T PF00532_consen 5 GVIVPDISNPFFAEIIRGIEQEAREHGYQLLLCNTGDD-EEKE-EYIELLLQRRVDGIILASS-EN-----DDEELRRLI 76 (279)
T ss_dssp EEEESSSTSHHHHHHHHHHHHHHHHTTCEEEEEEETTT-HHHH-HHHHHHHHTTSSEEEEESS-SC-----TCHHHHHHH
T ss_pred EEEECCCCCcHHHHHHHHHHHHHHHcCCEEEEecCCCc-hHHH-HHHHHHHhcCCCEEEEecc-cC-----ChHHHHHHH
Confidence 3677777665 356667788999888887654 2233 5666666667878777632 22 255666666
Q ss_pred HHhhhccCCCccEEeecc
Q 014163 229 TKKNEETGWDTPIHVDAA 246 (429)
Q Consensus 229 ~~~~~~~~~~~~l~vD~a 246 (429)
+.. --.|.+|..
T Consensus 77 ~~~------iPvV~~~~~ 88 (279)
T PF00532_consen 77 KSG------IPVVLIDRY 88 (279)
T ss_dssp HTT------SEEEEESS-
T ss_pred HcC------CCEEEEEec
Confidence 553 334555554
No 463
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=22.47 E-value=3.8e+02 Score=23.08 Aligned_cols=46 Identities=11% Similarity=0.148 Sum_probs=27.1
Q ss_pred HHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCc
Q 014163 168 EKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTL 214 (429)
Q Consensus 168 ~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~ 214 (429)
..+++.+|.++..+-..-+ +.++++-.+-.-+-+..++++..+.|.
T Consensus 26 ~~~aR~l~~~~iNLGfsG~-~~le~~~a~~ia~~~a~~~~ld~~~N~ 71 (178)
T PF14606_consen 26 AILARRLGLDVINLGFSGN-GKLEPEVADLIAEIDADLIVLDCGPNM 71 (178)
T ss_dssp HHHHHHHT-EEEEEE-TCC-CS--HHHHHHHHHS--SEEEEEESHHC
T ss_pred HHHHHHcCCCeEeeeecCc-cccCHHHHHHHhcCCCCEEEEEeecCC
Confidence 4467889999988887654 788877544333335577778777773
No 464
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=22.13 E-value=2.3e+02 Score=24.13 Aligned_cols=80 Identities=14% Similarity=0.078 Sum_probs=44.8
Q ss_pred CcEEEEcCCCchHHHH-HHHhcCceeEEEeccC-----CccccCHHHHHHHhhh----CCe-EEEEeeCCCccccccC--
Q 014163 154 KPNIVTGANVQVCWEK-FARYFEVELKEVKLEE-----GYYVMNPVKAVELVDE----NTI-CVAAILGSTLTGEFED-- 220 (429)
Q Consensus 154 ~~~vi~~~~~h~s~~~-~~~~~G~~v~~v~~~~-----~~~~~d~~~l~~~i~~----~~~-~v~~~~~~~~tG~~~~-- 220 (429)
.|.+++++..|-.+.. ..+..|++...++.|. ..-.+.++ +++.+++ ... -|+ ..||..|..++
T Consensus 18 ~P~l~V~si~~I~~~~~~Lk~~Gik~li~DkDNTL~~~~~~~i~~~-~~~~~~~l~~~~~~~~v~--IvSNsaGs~~d~~ 94 (168)
T PF09419_consen 18 LPHLYVPSIRDIDFEANHLKKKGIKALIFDKDNTLTPPYEDEIPPE-YAEWLNELKKQFGKDRVL--IVSNSAGSSDDPD 94 (168)
T ss_pred CCCEEcCChhhCCcchhhhhhcCceEEEEcCCCCCCCCCcCcCCHH-HHHHHHHHHHHCCCCeEE--EEECCCCcccCcc
Confidence 3677777777766665 2466788888887652 11233333 3333332 121 122 33455566654
Q ss_pred hHHHHHHHHHhhhccCCCccEE
Q 014163 221 VKLLHDLLTKKNEETGWDTPIH 242 (429)
Q Consensus 221 l~~I~~la~~~~~~~~~~~~l~ 242 (429)
-++...+.+.. |+.++
T Consensus 95 ~~~a~~~~~~l------gIpvl 110 (168)
T PF09419_consen 95 GERAEALEKAL------GIPVL 110 (168)
T ss_pred HHHHHHHHHhh------CCcEE
Confidence 46666777777 88764
No 465
>PF00289 CPSase_L_chain: Carbamoyl-phosphate synthase L chain, N-terminal domain; InterPro: IPR005481 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below). CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates [, ]. CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate []. The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC). Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain []. CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites []. The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain. Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein []. The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP []. There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia []. CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains []. This entry represents the N-terminal domain of the large subunit of carbamoyl phosphate synthase. This domain can also be found in certain other related proteins. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VA7_A 3OUU_A 3OUZ_B 1W96_B 1W93_A 1ULZ_A 3HB9_C 3HO8_A 3BG5_C 3HBL_A ....
Probab=22.09 E-value=3.9e+02 Score=20.84 Aligned_cols=57 Identities=9% Similarity=0.011 Sum_probs=28.9
Q ss_pred HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHh
Q 014163 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKK 231 (429)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~ 231 (429)
..++++.+|++...|-.+++.-..+.+. -..++.+ -+.+..-...++++|.+++++.
T Consensus 17 ~~ra~r~~Gi~tv~v~s~~d~~s~~~~~-------ad~~~~~-~~~~~~~~yl~~e~I~~ia~~~ 73 (110)
T PF00289_consen 17 IIRALRELGIETVAVNSNPDTVSTHVDM-------ADEAYFE-PPGPSPESYLNIEAIIDIARKE 73 (110)
T ss_dssp HHHHHHHTTSEEEEEEEGGGTTGHHHHH-------SSEEEEE-ESSSGGGTTTSHHHHHHHHHHT
T ss_pred HHHHHHHhCCcceeccCchhcccccccc-------cccceec-CcchhhhhhccHHHHhhHhhhh
Confidence 3445566677776666554322222211 1122222 2444444556677777777777
No 466
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=21.98 E-value=64 Score=32.68 Aligned_cols=32 Identities=19% Similarity=0.127 Sum_probs=28.2
Q ss_pred CCccccccChHHHHHHHHHhhhccCCCccEEeeccccc
Q 014163 212 STLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (429)
Q Consensus 212 ~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~ 249 (429)
....|+.++++++++-||++ |+.|++|.+.-+
T Consensus 74 d~~fGt~~dl~~Li~~~H~~------Gi~vi~D~V~NH 105 (479)
T PRK09441 74 RTKYGTKEELLNAIDALHEN------GIKVYADVVLNH 105 (479)
T ss_pred CcCcCCHHHHHHHHHHHHHC------CCEEEEEECccc
Confidence 45568899999999999999 999999998754
No 467
>PF05687 DUF822: Plant protein of unknown function (DUF822); InterPro: IPR008540 This group of proteins contains members of the BZR1/LAT61 family of plant transcriptional repressors involved in controlling the response to Brassinosteroids (BRs). BRs are plant hormones that play essential roles in growth and development. BZR1 binds directly to DNA repressing the synthesis of genes involved in BR synthesis. Phosphorylation of BZR1 by BIN1 targets BZR1 to the 20S proteosome, while dephosphorylation leads to nuclear accumulation of BZR1 [].
Probab=21.88 E-value=2.4e+02 Score=23.26 Aligned_cols=45 Identities=13% Similarity=0.115 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHHhCCCeEEeeCCCCceEEEEEecCCCCCCHHHHHHHHHHHHhccCceecc
Q 014163 345 ENCMGNARALREGLEKTGRFEILSKDVGVPLVAFSLKDSSAHTVFEISEGLRKKLNRFQVVYPQ 408 (429)
Q Consensus 345 ~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~L~~~l~~~G~~~~~ 408 (429)
.+.+..+.++...|...+++.+-.. -|.+++.++|. .|.||+|-.
T Consensus 20 RrRRAIaakIfaGLR~~Gny~Lp~~----------------aD~NeVLkALc---~eAGw~Ve~ 64 (150)
T PF05687_consen 20 RRRRAIAAKIFAGLRAHGNYKLPKH----------------ADNNEVLKALC---REAGWTVEP 64 (150)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCc----------------CCHHHHHHHHH---HhCCEEEcc
Confidence 3445567888899999987665321 23456665555 488999853
No 468
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=21.80 E-value=5.2e+02 Score=23.90 Aligned_cols=76 Identities=13% Similarity=0.134 Sum_probs=36.0
Q ss_pred HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeC-CCcc--ccccChHHHHHHHH------HhhhccCC
Q 014163 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILG-STLT--GEFEDVKLLHDLLT------KKNEETGW 237 (429)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~-~~~t--G~~~~l~~I~~la~------~~~~~~~~ 237 (429)
+...++..|+.+.......+...+-.+.++.+...+-..|++-.+ ..+. ..++.++++.++++ ..
T Consensus 119 l~~~~~~~~i~~~~~~~~~dp~~~~~~~l~~~~~~~~D~ViIDT~G~~~~d~~~~~el~~~~~~~~~~~~~~~~------ 192 (272)
T TIGR00064 119 LEEWAKRLGVDVIKQKEGADPAAVAFDAIQKAKARNIDVVLIDTAGRLQNKVNLMDELKKIKRVIKKVDKDAPD------ 192 (272)
T ss_pred HHHHHHhCCeEEEeCCCCCCHHHHHHHHHHHHHHCCCCEEEEeCCCCCcchHHHHHHHHHHHHHHhcccCCCCc------
Confidence 444566677554322211110011122333444444455555443 3332 22345666666666 34
Q ss_pred CccEEeecccc
Q 014163 238 DTPIHVDAASG 248 (429)
Q Consensus 238 ~~~l~vD~a~~ 248 (429)
+.++++|+..+
T Consensus 193 ~~~LVl~a~~~ 203 (272)
T TIGR00064 193 EVLLVLDATTG 203 (272)
T ss_pred eEEEEEECCCC
Confidence 78899998654
No 469
>TIGR02964 xanthine_xdhC xanthine dehydrogenase accessory protein XdhC. Members of this protein family are the accessory protein XdhC for insertion of the molybdenum cofactor into the xanthine dehydrogenase large chain, XdhB, in bacteria. This protein is not part of the mature xanthine dehydrogenase. Xanthine dehydrogenase is an enzyme for purine catabolism, from other purines to xanthine to urate to further breakdown products.
Probab=21.76 E-value=4.4e+02 Score=23.96 Aligned_cols=73 Identities=16% Similarity=0.124 Sum_probs=47.0
Q ss_pred CcEEEEcCCCchH--HHHHHHhcCceeEEEeccCCc-----c-------ccCHHHHHHHhhhCCeEEEEeeCCCcccccc
Q 014163 154 KPNIVTGANVQVC--WEKFARYFEVELKEVKLEEGY-----Y-------VMNPVKAVELVDENTICVAAILGSTLTGEFE 219 (429)
Q Consensus 154 ~~~vi~~~~~h~s--~~~~~~~~G~~v~~v~~~~~~-----~-------~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~ 219 (429)
.+.+++.-..|.+ +.+.+..+|.+|..++..++. + ..++++....+++++.+|+++|+...
T Consensus 100 ~~~L~IfGaG~va~~la~la~~lGf~V~v~D~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~vvi~th~h~~----- 174 (246)
T TIGR02964 100 APHVVLFGAGHVGRALVRALAPLPCRVTWVDSREAEFPEDLPDGVATLVTDEPEAEVAEAPPGSYFLVLTHDHAL----- 174 (246)
T ss_pred CCEEEEECCcHHHHHHHHHHhcCCCEEEEEeCCcccccccCCCCceEEecCCHHHHHhcCCCCcEEEEEeCChHH-----
Confidence 3688888888875 777889999999988754320 1 01244444455667788888877544
Q ss_pred ChHHHHHHHHHh
Q 014163 220 DVKLLHDLLTKK 231 (429)
Q Consensus 220 ~l~~I~~la~~~ 231 (429)
|.+.+..+.++.
T Consensus 175 D~~~L~~aL~~~ 186 (246)
T TIGR02964 175 DLELCHAALRRG 186 (246)
T ss_pred HHHHHHHHHhCC
Confidence 555555555434
No 470
>PRK05428 HPr kinase/phosphorylase; Provisional
Probab=21.73 E-value=1.6e+02 Score=27.85 Aligned_cols=41 Identities=12% Similarity=0.145 Sum_probs=29.3
Q ss_pred HHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecc
Q 014163 194 KAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (429)
Q Consensus 194 ~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a 246 (429)
.+++.++.++.+++++.+.++ ..++.++|+++ +++++.=..
T Consensus 74 ~~~~l~~~~~P~iIvt~~~~~------p~~l~~~a~~~------~ipll~t~~ 114 (308)
T PRK05428 74 RLKKLFSLEPPCIIVTRGLEP------PPELLEAAKEA------GIPLLRTPL 114 (308)
T ss_pred HHHHHhCCCCCEEEEECcCCC------CHHHHHHHHHc------CCcEEEeCC
Confidence 444445557788888887655 66788999999 888776554
No 471
>cd01744 GATase1_CPSase Small chain of the glutamine-dependent form of carbamoyl phosphate synthase, CPSase II. This group of sequences represents the small chain of the glutamine-dependent form of carbamoyl phosphate synthase, CPSase II. CPSase II catalyzes the production of carbomyl phosphate (CP) from bicarbonate, glutamine and two molecules of MgATP. The reaction is believed to proceed by a series of four biochemical reactions involving a minimum of three discrete highly reactive intermediates. The synthesis of CP is critical for the initiation of two separate biosynthetic pathways. In one CP is coupled to aspartate, its carbon and nitrogen nuclei ultimately incorporated into the aromatic moieties of pyrimidine nucleotides. In the second pathway CP is condensed with ornithine at the start of the urea cycle and is utilized for the detoxification of ammonia and biosynthesis of arginine. CPSases may be encoded by one or by several genes, depending on the species. The E.coli enzyme is
Probab=21.62 E-value=4.6e+02 Score=22.22 Aligned_cols=43 Identities=9% Similarity=-0.074 Sum_probs=26.8
Q ss_pred CCchHHHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCC
Q 014163 162 NVQVCWEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGS 212 (429)
Q Consensus 162 ~~h~s~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~ 212 (429)
...+.+.++++..|+.+..++.+.+ .+.+. ..+...|+++.|.
T Consensus 7 g~~~~~~~~l~~~G~~~~~~~~~~~-----~~~~~---~~~~dgiil~GG~ 49 (178)
T cd01744 7 GVKHNILRELLKRGCEVTVVPYNTD-----AEEIL---KLDPDGIFLSNGP 49 (178)
T ss_pred CcHHHHHHHHHHCCCeEEEEECCCC-----HHHHh---hcCCCEEEECCCC
Confidence 3445677788888999988886532 23221 1245677777664
No 472
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=21.60 E-value=4e+02 Score=24.82 Aligned_cols=53 Identities=21% Similarity=0.190 Sum_probs=37.3
Q ss_pred ceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEecc
Q 014163 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLE 184 (429)
Q Consensus 120 ~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~~ 184 (429)
.+-.++|..+.-+|..+... |. +-.|++|+..-..-...++.+|++++.++-+
T Consensus 62 vv~aSsGN~g~alA~~a~~~---------G~---~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~~ 114 (290)
T TIGR01138 62 LIEATSGNTGIALAMIAALK---------GY---RMKLLMPDNMSQERKAAMRAYGAELILVTKE 114 (290)
T ss_pred EEEECCChHHHHHHHHHHHc---------CC---eEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 45566777777666665432 21 2367888877777778889999999998753
No 473
>cd06317 PBP1_ABC_sugar_binding_like_8 Periplasmic sugar-binding domain of uncharacterized ABC-type transport systems. Pperiplasmic sugar-binding domain of uncharacterized ABC-type transport systems that share homology with a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily, which consists of two domains connected by a three-stranded hinge. The substrate specificity of this group is not known, but it is predicted to be involved in the transport of sugar-containing molecules and chemotaxis.
Probab=21.56 E-value=4.6e+02 Score=23.39 Aligned_cols=64 Identities=8% Similarity=-0.005 Sum_probs=32.6
Q ss_pred HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEE
Q 014163 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIH 242 (429)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~ 242 (429)
....++..|..+...+...+ ..--.+.++..+..++..+++..... +...+..+.+++. +++++
T Consensus 22 ~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~~l~~~~vdgiii~~~~~-----~~~~~~l~~~~~~------~iPvV 85 (275)
T cd06317 22 FQAAAEEDGVEVIVLDANGD-VARQAAQVEDLIAQKVDGIILWPTDG-----QAYIPGLRKAKQA------GIPVV 85 (275)
T ss_pred HHHHHHhcCCEEEEEcCCcC-HHHHHHHHHHHHHcCCCEEEEecCCc-----cccHHHHHHHHHC------CCcEE
Confidence 44455667888776654321 11122334455556677776643221 1123334555667 77654
No 474
>cd06281 PBP1_LacI_like_5 Ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. This group includes the ligand-binding domain of uncharacterized DNA-binding regulatory proteins that are members of the LacI-GalR family of bacterial transcription repressors. The LacI-GalR family repressors are composed of two functional domains: an N-terminal HTH (helix-turn-helix) domain, which is responsible for the DNA-binding specificity, and a C-terminal ligand-binding domain, which is homologous to the sugar-binding domain of ABC-type transport systems that contain the type I periplasmic binding protein-like fold. As also observed in the periplasmic binding proteins, the C-terminal domain of the bacterial transcription repressor undergoes a conformational change upon ligand binding which in turn changes the DNA binding affinity of the repressor.
Probab=21.14 E-value=5.1e+02 Score=23.13 Aligned_cols=64 Identities=16% Similarity=-0.052 Sum_probs=34.9
Q ss_pred HHHHHHhcCceeEEEeccCCccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEe
Q 014163 167 WEKFARYFEVELKEVKLEEGYYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (429)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~v 243 (429)
+...++..|..+.....+.+ ..-..+.++..+..+...|++... +. +...+.+.+++. ++++++
T Consensus 21 i~~~a~~~g~~~~~~~~~~~-~~~~~~~i~~l~~~~vdgii~~~~-~~-----~~~~~~~~~~~~------~ipvV~ 84 (269)
T cd06281 21 AEDRLRAAGYSLLIANSLND-PERELEILRSFEQRRMDGIIIAPG-DE-----RDPELVDALASL------DLPIVL 84 (269)
T ss_pred HHHHHHHcCCEEEEEeCCCC-hHHHHHHHHHHHHcCCCEEEEecC-CC-----CcHHHHHHHHhC------CCCEEE
Confidence 45667778888776654322 122233444455556666666433 21 234566677777 775543
No 475
>PLN00011 cysteine synthase
Probab=20.87 E-value=5.9e+02 Score=24.13 Aligned_cols=52 Identities=17% Similarity=0.147 Sum_probs=35.6
Q ss_pred ceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEec
Q 014163 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (429)
Q Consensus 120 ~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~ 183 (429)
.+-.++|..+.-+|..+... |. +-.|++|...-..-....+.+|++++.++-
T Consensus 72 vv~aSsGN~g~alA~~a~~~---------G~---~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~ 123 (323)
T PLN00011 72 LIEATAGNTGIGLACIGAAR---------GY---KVILVMPSTMSLERRIILRALGAEVHLTDQ 123 (323)
T ss_pred EEEeCCChHHHHHHHHHHHc---------CC---eEEEEeCCCCCHHHHHHHHHcCCEEEEECC
Confidence 44556777776666655432 21 236788887766777788999999988874
No 476
>cd05126 Mth938 Mth938 domain. Mth938 is a hypothetical protein encoded by the Methanobacterium thermoautotrophicum (Mth) genome. This protein crystallizes as a dimer, although it is monomeric in solution, with one disulfide bond in each monomer. The function of the protein has not been determined.
Probab=20.72 E-value=2.8e+02 Score=21.98 Aligned_cols=47 Identities=19% Similarity=0.309 Sum_probs=34.6
Q ss_pred ccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEe
Q 014163 189 VMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (429)
Q Consensus 189 ~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~v 243 (429)
.++++++++.++.++..|+ .|+-..+.+-+-.++.+.+++. |+-+.+
T Consensus 45 ~l~~~~l~~ll~~~peivl--iGTG~~~~~~~~~~~~~~l~~~------Gi~ve~ 91 (117)
T cd05126 45 GLQPEELEELLEEGVEVIV--IGTGQSGALKVPPETVEKLEKR------GVEVLV 91 (117)
T ss_pred cCCHHHHHHHHhcCCCEEE--EcCCCCccccCCHHHHHHHHhc------CCEEEE
Confidence 5899999999998887544 4555556655566777788888 887665
No 477
>cd06320 PBP1_allose_binding Periplasmic allose-binding domain of bacterial transport systems that function as a primary receptor of active transport and chemotaxis. Periplasmic allose-binding domain of bacterial transport systems that function as a primary receptor of active transport and chemotaxis. The members of this group are belonging to a family of pentose/hexose sugar-binding proteins of the type I periplasmic binding protein superfamily. Like other periplasmic receptors of the ABC-type transport systems, the allose-binding protein consists of two alpha/beta domains connected by a three-stranded hinge. This Venus flytrap-like domain undergoes transition from an open to a closed conformational state upon ligand binding.
Probab=20.68 E-value=4.3e+02 Score=23.69 Aligned_cols=66 Identities=11% Similarity=-0.035 Sum_probs=35.8
Q ss_pred HHHHHHhcCceeEEEeccCC-ccccCHHHHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEe
Q 014163 167 WEKFARYFEVELKEVKLEEG-YYVMNPVKAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHV 243 (429)
Q Consensus 167 ~~~~~~~~G~~v~~v~~~~~-~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~v 243 (429)
+..+++..|..+..+..+.. +..--.+.++..+..+...+++... .. +.+.+..+.++++ +++++.
T Consensus 21 i~~~~~~~g~~~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~-~~----~~~~~~~~~~~~~------~iPvV~ 87 (275)
T cd06320 21 YENEAKKLGVSVDIQAAPSEGDQQGQLSIAENMINKGYKGLLFSPI-SD----VNLVPAVERAKKK------GIPVVN 87 (275)
T ss_pred HHHHHHHhCCeEEEEccCCCCCHHHHHHHHHHHHHhCCCEEEECCC-Ch----HHhHHHHHHHHHC------CCeEEE
Confidence 55667778888877765422 1111234455666667777665422 11 1123344566777 886653
No 478
>PRK11761 cysM cysteine synthase B; Provisional
Probab=20.66 E-value=5e+02 Score=24.26 Aligned_cols=52 Identities=19% Similarity=0.171 Sum_probs=36.5
Q ss_pred ceEeCCchHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCCCchHHHHHHHhcCceeEEEec
Q 014163 120 GVGTVGSSEAIMLAGLAFKRKWQQKRKEQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKL 183 (429)
Q Consensus 120 ~~~t~g~t~a~~~al~a~~~~~~~~~~~~g~~~~~~~vi~~~~~h~s~~~~~~~~G~~v~~v~~ 183 (429)
.+..++|..+.-+|..+... |. +-.|++|+..-..-...++.+|++++.++.
T Consensus 66 vv~aSsGN~g~alA~~a~~~---------G~---~~~i~~p~~~~~~k~~~~~~~GA~v~~~~~ 117 (296)
T PRK11761 66 LIEATSGNTGIALAMIAAIK---------GY---RMKLIMPENMSQERRAAMRAYGAELILVPK 117 (296)
T ss_pred EEEeCCChHHHHHHHHHHHc---------CC---CEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 45566777777666665432 21 236788887766777788999999999984
No 479
>TIGR00679 hpr-ser Hpr(Ser) kinase/phosphatase. The hprK gene of Enterococcus faecalis encodes a bifunctional enzyme: the HPr kinase/phosphatase
Probab=20.42 E-value=1.7e+02 Score=27.54 Aligned_cols=41 Identities=15% Similarity=0.013 Sum_probs=29.6
Q ss_pred HHHHHhhhCCeEEEEeeCCCccccccChHHHHHHHHHhhhccCCCccEEeecc
Q 014163 194 KAVELVDENTICVAAILGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAA 246 (429)
Q Consensus 194 ~l~~~i~~~~~~v~~~~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a 246 (429)
.+++.++.++.+++++.+..+ -+++.++|+++ +++++.=..
T Consensus 74 ~~~~~~~~~~P~iIvt~~~~~------p~~l~~~a~~~------~ip~l~t~~ 114 (304)
T TIGR00679 74 IIHNLLTLNPPAIILSKSFTD------PTVLLQVNETY------QVPILKTDL 114 (304)
T ss_pred HHHHHhCCCCCEEEEECcCCC------CHHHHHHHHHh------CCcEEEeCC
Confidence 344455557888888887655 48899999999 888875443
No 480
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=20.17 E-value=74 Score=32.86 Aligned_cols=34 Identities=18% Similarity=0.103 Sum_probs=29.9
Q ss_pred eCCCccccccChHHHHHHHHHhhhccCCCccEEeeccccc
Q 014163 210 LGSTLTGEFEDVKLLHDLLTKKNEETGWDTPIHVDAASGG 249 (429)
Q Consensus 210 ~~~~~tG~~~~l~~I~~la~~~~~~~~~~~~l~vD~a~~~ 249 (429)
.++...|..++++++++.|+++ |+-|++|.++.+
T Consensus 151 ~~~~~~G~~~e~k~lV~~aH~~------Gi~VilD~V~NH 184 (542)
T TIGR02402 151 APHNAYGGPDDLKALVDAAHGL------GLGVILDVVYNH 184 (542)
T ss_pred ccccccCCHHHHHHHHHHHHHC------CCEEEEEEccCC
Confidence 4556678899999999999999 999999999865
No 481
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=20.12 E-value=4.9e+02 Score=23.22 Aligned_cols=29 Identities=17% Similarity=-0.083 Sum_probs=22.3
Q ss_pred cEEEEcCCCchHHHHHHHhcCceeEEEec
Q 014163 155 PNIVTGANVQVCWEKFARYFEVELKEVKL 183 (429)
Q Consensus 155 ~~vi~~~~~h~s~~~~~~~~G~~v~~v~~ 183 (429)
..|+++..........++.+|+++..++-
T Consensus 76 ~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~ 104 (244)
T cd00640 76 CTIVMPEGASPEKVAQMRALGAEVVLVPG 104 (244)
T ss_pred EEEEECCCCCHHHHHHHHHCCCEEEEECC
Confidence 36778877766677778889999887764
Done!