Query 014164
Match_columns 429
No_of_seqs 220 out of 1981
Neff 9.1
Searched_HMMs 29240
Date Mon Mar 25 06:37:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014164.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014164hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wme_A BADH, betaine aldehyde 100.0 1.2E-88 4.1E-93 685.6 42.0 396 18-428 5-411 (490)
2 3ifg_A Succinate-semialdehyde 100.0 9.9E-85 3.4E-89 658.0 42.9 395 19-428 12-412 (484)
3 3rh9_A Succinate-semialdehyde 100.0 2.3E-84 7.9E-89 657.5 42.3 396 17-428 9-412 (506)
4 3ek1_A Aldehyde dehydrogenase; 100.0 1.6E-84 5.5E-89 658.3 40.9 394 19-428 32-430 (504)
5 3i44_A Aldehyde dehydrogenase; 100.0 3.8E-84 1.3E-88 655.1 43.3 397 15-428 21-427 (497)
6 3iwj_A Putative aminoaldehyde 100.0 4E-84 1.4E-88 657.1 43.0 399 18-428 6-417 (503)
7 4f3x_A Putative aldehyde dehyd 100.0 1.7E-84 5.9E-89 657.8 39.9 396 18-428 24-425 (498)
8 3ed6_A Betaine aldehyde dehydr 100.0 2.9E-84 9.8E-89 658.8 41.5 397 17-428 30-438 (520)
9 3qan_A 1-pyrroline-5-carboxyla 100.0 6.7E-84 2.3E-88 658.7 43.6 403 9-428 27-441 (538)
10 2o2p_A Formyltetrahydrofolate 100.0 3.9E-84 1.4E-88 657.4 41.2 397 20-428 37-445 (517)
11 1bxs_A Aldehyde dehydrogenase; 100.0 6.2E-84 2.1E-88 654.2 41.0 396 18-428 19-424 (501)
12 1a4s_A ALDH, betaine aldehyde 100.0 1.5E-83 5.3E-88 652.2 43.4 398 15-428 15-424 (503)
13 3u4j_A NAD-dependent aldehyde 100.0 1.4E-83 4.8E-88 654.9 43.0 397 17-428 20-426 (528)
14 4e4g_A Methylmalonate-semialde 100.0 1.3E-83 4.6E-88 654.0 41.0 396 18-428 25-430 (521)
15 1o04_A Aldehyde dehydrogenase, 100.0 1.2E-83 4.2E-88 651.9 40.4 394 20-428 20-423 (500)
16 3k2w_A Betaine-aldehyde dehydr 100.0 1.2E-83 4.1E-88 652.7 40.2 397 17-428 10-416 (497)
17 3b4w_A Aldehyde dehydrogenase; 100.0 2E-83 6.9E-88 650.2 41.0 395 19-428 8-411 (495)
18 3r31_A BADH, betaine aldehyde 100.0 1.2E-83 3.9E-88 653.9 38.8 395 16-428 11-416 (517)
19 1wnd_A Putative betaine aldehy 100.0 3E-83 1E-87 648.3 41.4 394 20-428 24-423 (495)
20 3prl_A NADP-dependent glyceral 100.0 4.5E-83 1.5E-87 648.5 42.1 394 18-428 10-410 (505)
21 2d4e_A 5-carboxymethyl-2-hydro 100.0 4.7E-83 1.6E-87 650.4 41.6 396 17-428 24-433 (515)
22 1uzb_A 1-pyrroline-5-carboxyla 100.0 7.1E-83 2.4E-87 649.8 43.0 401 12-428 30-441 (516)
23 2imp_A Lactaldehyde dehydrogen 100.0 7.5E-83 2.6E-87 645.1 41.1 397 17-428 4-407 (479)
24 3jz4_A Succinate-semialdehyde 100.0 1.6E-82 5.6E-87 643.0 43.2 395 19-428 9-409 (481)
25 2j6l_A Aldehyde dehydrogenase 100.0 1.2E-81 4E-86 638.5 44.5 402 8-428 14-424 (500)
26 2ve5_A BADH, betaine aldehyde 100.0 4.7E-82 1.6E-86 641.5 41.4 396 18-428 5-411 (490)
27 2w8n_A Succinate-semialdehyde 100.0 2.9E-82 9.8E-87 641.1 39.2 399 12-428 6-414 (487)
28 3ty7_A Putative aldehyde dehyd 100.0 4.3E-82 1.5E-86 639.9 38.5 396 14-428 2-406 (478)
29 3r64_A NAD dependent benzaldeh 100.0 2.4E-81 8.1E-86 637.5 40.6 392 20-428 13-412 (508)
30 4dng_A Uncharacterized aldehyd 100.0 2.9E-81 1E-85 634.9 40.9 395 18-428 5-405 (485)
31 3ju8_A Succinylglutamic semial 100.0 1.5E-80 5E-85 629.5 45.8 391 20-428 6-404 (490)
32 1euh_A NADP dependent non phos 100.0 2.9E-81 1E-85 632.8 40.2 389 19-428 4-401 (475)
33 3pqa_A Lactaldehyde dehydrogen 100.0 2.7E-81 9.2E-86 632.7 39.6 381 22-428 2-391 (486)
34 1t90_A MMSDH, probable methylm 100.0 2.7E-81 9.2E-86 634.3 39.2 393 20-428 6-405 (486)
35 3ros_A NAD-dependent aldehyde 100.0 2.5E-80 8.5E-85 625.3 43.2 375 46-428 6-386 (484)
36 1uxt_A Glyceraldehyde-3-phosph 100.0 9.9E-81 3.4E-85 631.3 39.2 391 19-428 18-419 (501)
37 4e3x_A Delta-1-pyrroline-5-car 100.0 4.1E-80 1.4E-84 631.9 41.5 404 7-428 52-474 (563)
38 3etf_A Putative succinate-semi 100.0 2.1E-78 7.3E-83 610.8 42.8 378 44-428 7-389 (462)
39 4f9i_A Proline dehydrogenase/d 100.0 7.6E-79 2.6E-83 654.6 41.8 404 8-428 520-935 (1026)
40 3lns_A Benzaldehyde dehydrogen 100.0 4.5E-78 1.5E-82 606.8 43.7 374 46-427 8-381 (457)
41 4h7n_A Aldehyde dehydrogenase; 100.0 1.9E-78 6.6E-83 612.1 38.8 377 45-428 7-388 (474)
42 3sza_A Aldehyde dehydrogenase, 100.0 3.9E-77 1.3E-81 600.3 42.5 360 63-428 14-374 (469)
43 2y53_A Aldehyde dehydrogenase 100.0 1E-76 3.5E-81 607.4 38.6 392 20-428 8-435 (534)
44 3v4c_A Aldehyde dehydrogenase 100.0 6.3E-76 2.2E-80 600.8 38.1 388 16-428 26-436 (528)
45 1ez0_A ALDH, aldehyde dehydrog 100.0 2E-73 6.8E-78 580.0 36.6 368 46-428 9-401 (510)
46 3haz_A Proline dehydrogenase; 100.0 1.2E-70 4.2E-75 589.7 41.4 361 61-428 544-912 (1001)
47 3my7_A Alcohol dehydrogenase/a 100.0 1.4E-64 4.8E-69 508.0 29.3 339 62-428 2-360 (452)
48 3k9d_A LMO1179 protein, aldehy 100.0 1.7E-62 5.7E-67 494.5 29.1 339 63-428 8-369 (464)
49 2h5g_A Delta 1-pyrroline-5-car 100.0 3.9E-63 1.4E-67 497.2 23.0 333 47-428 10-359 (463)
50 1vlu_A Gamma-glutamyl phosphat 100.0 5.1E-63 1.7E-67 497.1 17.3 325 68-428 15-364 (468)
51 4ghk_A Gamma-glutamyl phosphat 100.0 2.2E-59 7.6E-64 468.9 29.0 317 66-428 25-363 (444)
52 1o20_A Gamma-glutamyl phosphat 100.0 3.1E-59 1E-63 465.6 23.4 316 65-428 12-346 (427)
53 4gic_A HDH, histidinol dehydro 79.1 46 0.0016 31.9 21.9 162 159-337 119-294 (423)
54 3fgh_A Transcription factor A, 50.6 30 0.001 23.4 5.1 38 74-111 28-65 (67)
55 3v42_A Folliculin; tumor suppr 46.0 25 0.00085 30.7 4.9 66 186-256 20-85 (226)
56 2eqz_A High mobility group pro 41.5 57 0.0019 23.3 5.7 38 74-111 47-84 (86)
57 2co9_A Thymus high mobility gr 40.0 93 0.0032 23.0 6.8 45 76-120 49-93 (102)
58 1v63_A Nucleolar transcription 37.4 93 0.0032 23.1 6.4 41 75-115 37-77 (101)
59 1hry_A Human SRY; DNA, DNA-bin 31.0 72 0.0025 22.0 4.6 33 76-108 36-68 (76)
60 2cs1_A PMS1 protein homolog 1; 30.6 43 0.0015 24.4 3.5 40 74-113 37-76 (92)
61 1gt0_D Transcription factor SO 30.0 75 0.0026 22.2 4.6 33 76-108 34-66 (80)
62 2crj_A SWI/SNF-related matrix- 29.0 78 0.0027 22.9 4.6 36 76-111 39-74 (92)
63 1v64_A Nucleolar transcription 28.2 1.2E+02 0.0041 22.8 5.7 41 74-114 43-83 (108)
64 1b93_A Protein (methylglyoxal 26.9 96 0.0033 25.2 5.2 112 171-307 12-135 (152)
65 1s7i_A Hypothetical protein PA 26.6 1.1E+02 0.0037 23.7 5.3 69 355-428 30-105 (124)
66 3u2b_C Transcription factor SO 24.8 1E+02 0.0035 21.3 4.5 33 76-108 34-66 (79)
67 1j46_A SRY, sex-determining re 23.9 1.4E+02 0.0049 21.0 5.2 33 76-108 36-68 (85)
68 2fiu_A Conserved hypothetical 23.4 2.2E+02 0.0076 20.8 7.5 56 353-427 16-73 (99)
69 4euw_A Transcription factor SO 23.3 1.4E+02 0.0048 22.3 5.3 34 75-108 60-93 (106)
70 1ckt_A High mobility group 1 p 23.1 65 0.0022 21.8 3.1 36 74-109 33-68 (71)
71 3pk1_B Apoptosis regulator BAX 22.9 1.2E+02 0.0041 17.6 3.5 21 87-107 8-28 (34)
72 2lef_A LEF-1 HMG, protein (lym 22.8 1.2E+02 0.0042 21.4 4.7 33 76-108 34-66 (86)
73 4a3n_A Transcription factor SO 22.5 81 0.0028 21.3 3.5 31 76-106 34-64 (71)
74 3f27_D Transcription factor SO 22.1 1.2E+02 0.0042 21.2 4.5 33 76-108 38-70 (83)
75 2ioj_A Hypothetical protein AF 21.9 69 0.0024 25.2 3.4 46 226-271 53-100 (139)
76 1hme_A High mobility group pro 21.6 62 0.0021 22.4 2.8 34 76-109 38-71 (77)
77 2xw6_A MGS, methylglyoxal synt 20.6 50 0.0017 26.2 2.2 59 217-275 42-111 (134)
78 2e6o_A HMG box-containing prot 20.5 1.4E+02 0.0047 21.3 4.5 31 76-106 49-79 (87)
No 1
>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=1.2e-88 Score=685.56 Aligned_cols=396 Identities=24% Similarity=0.349 Sum_probs=368.0
Q ss_pred cccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHH
Q 014164 18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQS 97 (429)
Q Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~ 97 (429)
.++|+|||| +|+++.+|.+|+++|| +||++++ .++.++.+|+++||++|++||+.|+++|+.+|.++|++
T Consensus 5 ~~~kl~I~G-~~~~~~~~~~~~v~nP--------~tg~~i~-~v~~a~~~dv~~Av~aA~~A~~~W~~~~~~~R~~~L~~ 74 (490)
T 2wme_A 5 EEQKLYIGG-RYVEASSGATFETINP--------ANGEVLA-KVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRR 74 (490)
T ss_dssp CCBCEECSS-SEECCSSSCEEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred CCCcEEECC-eeeCCCCCCEEEeeCC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHH
Confidence 467999999 9999999877777777 9999998 67799999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEc
Q 014164 98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIS 177 (429)
Q Consensus 98 ~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 177 (429)
++++|++++++|++++++|+|||+.+++..|+..+++.++|+++..+++.+.... ...+...++.++|+|||++|+
T Consensus 75 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~----~~~~~~~~~~~~P~GVv~~I~ 150 (490)
T 2wme_A 75 AVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIP----LRETSFVYTRREPLGVVAGIG 150 (490)
T ss_dssp HHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEE----EETTEEEEEEEEECSEEEEEC
T ss_pred HHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCcccc----ccCCcceeEEecceeEEEEec
Confidence 9999999999999999999999999997557999999999999988876543321 123556789999999999999
Q ss_pred CCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCC
Q 014164 178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGS 254 (429)
Q Consensus 178 p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs 254 (429)
|||||+...++++++||++||+||+|||+.+|+++.++++++.++ +|+|++|+|+| +.+.++.|++|+ +|.|.||||
T Consensus 151 PwNfP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~FTGS 230 (490)
T 2wme_A 151 AWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGG 230 (490)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESC
T ss_pred cccCcchhhhhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEEEECC
Confidence 999999999999999999999999999999999999999999999 99999999999 467899999997 999999999
Q ss_pred hHHHHHHHH-HHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHH
Q 014164 255 PRVGRIVMA-AAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNE 333 (429)
Q Consensus 255 ~~~~~~i~~-~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~ 333 (429)
+.+|+.+.+ .++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|+|||+++|++|+++|+++
T Consensus 231 ~~~G~~i~~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~ 309 (490)
T 2wme_A 231 TSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARFEAKVLER 309 (490)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHH
T ss_pred hHHHHHHHHhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHh-ccCCCcCCCceeeccchhHHHHHHHHHHHH
Confidence 999998876 455678999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC-----CCCceEecEEEecCCCCCCccccCcc
Q 014164 334 LKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD-----EKQLKIAPTILLDVPDDSTIMKEEIF 406 (429)
Q Consensus 334 ~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~f 406 (429)
++++++|+|. +++++||++++.+++++.++|+++. .|+++++||... .+|+|++|||+.+++++|++++||+|
T Consensus 310 ~~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~eEiF 389 (490)
T 2wme_A 310 VQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIF 389 (490)
T ss_dssp HHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCC
T ss_pred HHhCcCCCCccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhcccc
Confidence 9999999996 6899999999999999999999986 578999999763 25899999999999999999999999
Q ss_pred ccceeeEecCCHHHHHHHHHhh
Q 014164 407 GPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 407 gPv~~v~~~~~~~eai~l~n~~ 428 (429)
|||++|++|+|+||||+++|++
T Consensus 390 GPVl~v~~~~~~deAi~~aN~~ 411 (490)
T 2wme_A 390 GPVMSILVYDDEDEAIRRANDT 411 (490)
T ss_dssp SSEEEEEEESCHHHHHHHHHCS
T ss_pred CCEEEEEEeCCHHHHHHHHhcC
Confidence 9999999999999999999975
No 2
>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q
Probab=100.00 E-value=9.9e-85 Score=657.99 Aligned_cols=395 Identities=22% Similarity=0.337 Sum_probs=367.3
Q ss_pred ccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHH
Q 014164 19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI 98 (429)
Q Consensus 19 ~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~ 98 (429)
..++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++|+++|++||+.|+.+++.+|.++|+++
T Consensus 12 ~~~~~I~G-~~~~~~~~~~~~v~~P--------~tg~~i~-~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~ 81 (484)
T 3ifg_A 12 RHQAYIGG-EWQAADSDATFEVFDP--------ATGESLG-TVPKMGAAETARAIEAAQAAWAGWRMKTAKERAAILRRW 81 (484)
T ss_dssp CCSEEETT-EEECCTTCCEEEEECT--------TTCCEEE-EEECBCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred ccceeECC-EEeeCCCCCEEEeECC--------CCCCEEE-EEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHH
Confidence 45799999 9999888866666666 9999998 677999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcC
Q 014164 99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIST 178 (429)
Q Consensus 99 a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 178 (429)
+++|+++.++|++++++|+|||..+++ .|+..+++.++|++...+++.+.... ....+...++.++|+|||++|+|
T Consensus 82 a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~g~~~~---~~~~~~~~~~~~~P~GVv~~I~P 157 (484)
T 3ifg_A 82 FDLVIANSDDLALILTTEQGKPLAEAK-GEIAYAASFIEWFAEEGKRVAGDTLP---TPDANKRIVVVKEPIGVCAAITP 157 (484)
T ss_dssp HHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEEC---CSSTTEEEEEEEEECSSEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHhhcCcccc---ccCCCceeEEEecCCcEEEEECC
Confidence 999999999999999999999999996 69999999999999988765433221 11234567899999999999999
Q ss_pred CchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCC-HHHHHHHHhcC-CCEEEEeCCh
Q 014164 179 WNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGA-VAETSALLEQK-WDKILYTGSP 255 (429)
Q Consensus 179 ~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~-~~~~~~L~~~~-v~~v~ftGs~ 255 (429)
||||+...++++++||++||+||+|||+.+|+++..+++++.++ +|+|++|+|+|+ .+.++.|++|+ ++.|.||||+
T Consensus 158 wN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v~FTGS~ 237 (484)
T 3ifg_A 158 WNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKLSFTGST 237 (484)
T ss_dssp SSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEEEEESCH
T ss_pred CcChHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCH
Confidence 99999999999999999999999999999999999999999999 999999999994 57899999997 9999999999
Q ss_pred HHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHh
Q 014164 256 RVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELK 335 (429)
Q Consensus 256 ~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~ 335 (429)
.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++|++|+++|+++++
T Consensus 238 ~~G~~i~~~aa~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 316 (484)
T 3ifg_A 238 AVGRLLMAQSAPTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKY-RNNGQTCVCTNRFFVHERVYDAFADKLAAAVS 316 (484)
T ss_dssp HHHHHHHHHTGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCCCEEEEEGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCcccCCCeEEEcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred hhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC-CCCceEecEEEecCCCCCCccccCccccceee
Q 014164 336 EFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPI 412 (429)
Q Consensus 336 ~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v 412 (429)
++++|+|. +++++||++++.+++++.++|+++. .|+++++||... ..|+|++|||+.+++++|++++||+||||++|
T Consensus 317 ~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v 396 (484)
T 3ifg_A 317 KLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLAPL 396 (484)
T ss_dssp TCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCCSSEEEE
T ss_pred hccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeeeCcEEEE
Confidence 99999996 6899999999999999999999986 578999999763 36999999999999999999999999999999
Q ss_pred EecCCHHHHHHHHHhh
Q 014164 413 VTVSIVSSAHFKLKAC 428 (429)
Q Consensus 413 ~~~~~~~eai~l~n~~ 428 (429)
++|+|.||||+++|++
T Consensus 397 ~~~~~~deAi~~aN~~ 412 (484)
T 3ifg_A 397 FRFASEEELVRLANDT 412 (484)
T ss_dssp EEECCHHHHHHHHHCS
T ss_pred EEeCCHHHHHHHHhCC
Confidence 9999999999999975
No 3
>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}
Probab=100.00 E-value=2.3e-84 Score=657.45 Aligned_cols=396 Identities=21% Similarity=0.312 Sum_probs=370.4
Q ss_pred ccccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHH
Q 014164 17 ACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQ 96 (429)
Q Consensus 17 ~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~ 96 (429)
....++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++|+++|++||+.|+.+++.+|.++|+
T Consensus 9 ~~~~~~~I~G-~~~~~~~~~~~~v~~P--------~tg~~i~-~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~ 78 (506)
T 3rh9_A 9 LENLTGYIGG-RWKDSAGGATFDVYNP--------ATGSVIA-KVPSMPEEDVVAAVEAGQSALRLTNPWPIETRRKWLE 78 (506)
T ss_dssp GSCCSEEETT-EEECCCTTCEEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHHCCSSSCCCHHHHHHHHH
T ss_pred ccccCeeECC-EEeeCCCCCEEEEECC--------CCCCEEE-EEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHH
Confidence 3566899999 9999888866666666 9999998 7779999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEe-ecceEEEE
Q 014164 97 SIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIIS-EPLGVVLV 175 (429)
Q Consensus 97 ~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~Gvv~~ 175 (429)
+++++|++++++|++++++|+|||..+++ .|+..+++.++|++..++++.+.... . ..+...++.+ +|+|||++
T Consensus 79 ~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~-~---~~~~~~~~~~~~P~GVV~~ 153 (506)
T 3rh9_A 79 DIRDGLKENREEIGRILCMEHGKPWKEAQ-GEVDYAAGFFDYCAKHISALDSHTIP-E---KPKDCTWTVHYRPVGVTGL 153 (506)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGGCCEECS-C---CGGGCEEEEEEEECCSEEE
T ss_pred HHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccc-c---CCCceeeEeecccceEEEE
Confidence 99999999999999999999999999997 79999999999999999998764321 1 1345678889 99999999
Q ss_pred EcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEe
Q 014164 176 ISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYT 252 (429)
Q Consensus 176 i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ft 252 (429)
|+|||||+...++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+| +.+.++.|++|+ +|.|.||
T Consensus 154 I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FT 233 (506)
T 3rh9_A 154 IVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPMLSFT 233 (506)
T ss_dssp ECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEE
T ss_pred ECCCchHHHHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEEEEE
Confidence 99999999999999999999999999999999999999999999999 99999999999 557889999997 9999999
Q ss_pred CChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHH
Q 014164 253 GSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN 332 (429)
Q Consensus 253 Gs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~ 332 (429)
||+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++|++|+++|++
T Consensus 234 GS~~vG~~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~ 312 (506)
T 3rh9_A 234 GSTEVGRKLIVDTAEQVKKLALELGGNAPFIVFDDADLEAAADNLIANKF-RGGGQTCVCANRIFVHEKVADAFGQKLAE 312 (506)
T ss_dssp SCHHHHHHHHHHTTTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCSSSSCCEEEEETTTHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhhhcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHH-HhCCCCcccCcEEEEcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCcc-CC-CCceEecEEEecCCCCCCccccCcccc
Q 014164 333 ELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQR-DE-KQLKIAPTILLDVPDDSTIMKEEIFGP 408 (429)
Q Consensus 333 ~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~-~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgP 408 (429)
+++++++|+|. +++++||++++.+++++.++|+++. .|+++++||.. +. .|+|++|||+.+++++|++++||+|||
T Consensus 313 ~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGP 392 (506)
T 3rh9_A 313 RVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGP 392 (506)
T ss_dssp HHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCCCSS
T ss_pred HHHhccCCCCcccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccccCc
Confidence 99999999996 6899999999999999999999986 57899999975 33 689999999999999999999999999
Q ss_pred ceeeEecCCHHHHHHHHHhh
Q 014164 409 LLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 409 v~~v~~~~~~~eai~l~n~~ 428 (429)
|++|++|+|+||||+++|++
T Consensus 393 Vl~v~~~~~~deAi~~aN~~ 412 (506)
T 3rh9_A 393 LVPMALFRTEEEVIDAGNDT 412 (506)
T ss_dssp EEEEEEECCHHHHHHHHTCS
T ss_pred EEEEEEeCCHHHHHHHHhCC
Confidence 99999999999999999975
No 4
>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}
Probab=100.00 E-value=1.6e-84 Score=658.28 Aligned_cols=394 Identities=21% Similarity=0.327 Sum_probs=366.8
Q ss_pred ccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHH
Q 014164 19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI 98 (429)
Q Consensus 19 ~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~ 98 (429)
..++|||| +|+.+.++.+|+++|| +||++++ .++.++.+|+++|+++|++||+.|+.+++.+|.++|+++
T Consensus 32 ~~~~~I~G-~~~~~~~~~~~~v~nP--------~tg~~i~-~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~~ 101 (504)
T 3ek1_A 32 KSQCLVNG-RWIDAADGTTIKVTNP--------ADGSVIG-TVPSLSVATIKEAIDASAKALSGWAAKTAKERAGILRKW 101 (504)
T ss_dssp CSSEEETT-EEECCTTCCEEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred ccCeEECC-EEeeCCCCCEEEEECC--------CCCCEEE-EEcCCCHHHHHHHHHHHHHHHHhhccCCHHHHHHHHHHH
Confidence 35799999 9999888866666666 9999998 777999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcC
Q 014164 99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIST 178 (429)
Q Consensus 99 a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 178 (429)
+++|++++++|++++++|+|||+.+++ .|+..+++.++|++...+++.+.... ....+...++.++|+|||++|+|
T Consensus 102 a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~---~~~~~~~~~~~~~P~GVV~~I~P 177 (504)
T 3ek1_A 102 FDLIIANADDIALIMTSEQGKPLAEAR-GEVLYAASFIEWFAEEAKRVYGDTIP---APQNGQRLTVIRQPVGVTAAITP 177 (504)
T ss_dssp HHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEEC---CSSTTEEEEEEEEECCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccc---cccccccceeeccCceEEEEECC
Confidence 999999999999999999999999996 69999999999999988765433221 11234567899999999999999
Q ss_pred CchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCCh
Q 014164 179 WNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSP 255 (429)
Q Consensus 179 ~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~ 255 (429)
||||+...++++++||++||+||+|||+.+|+++.++++++.++ +|+|++|+|+| +.+.++.|++|+ +|.|.||||+
T Consensus 178 wN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V~FTGS~ 257 (504)
T 3ek1_A 178 WNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKLSFTGST 257 (504)
T ss_dssp SSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEEEEESCH
T ss_pred CcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEEEEECCH
Confidence 99999999999999999999999999999999999999999999 99999999998 457899999997 9999999999
Q ss_pred HHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHh
Q 014164 256 RVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELK 335 (429)
Q Consensus 256 ~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~ 335 (429)
.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++|++|+++|+++++
T Consensus 258 ~~G~~i~~~aa~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 336 (504)
T 3ek1_A 258 EVGRLLMAQCAPTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKY-RNAGQTCVCANRIYVQRGVYDKFAEKLAAKVK 336 (504)
T ss_dssp HHHHHHHHHHGGGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEEHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHH-hcCCCCCCCCCEEEEehhHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred hhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccceeeE
Q 014164 336 EFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIV 413 (429)
Q Consensus 336 ~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~ 413 (429)
++++|+|. +++++||++++.+++++.++|+++. .|+++++||.. ..|+|++|||+.+++++|++++||+||||++|+
T Consensus 337 ~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~-~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 415 (504)
T 3ek1_A 337 ELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE-LGGLFFEPGILTGVTSDMLVAKEETFGPLAPLF 415 (504)
T ss_dssp TCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE-EETTEECCEEEEEECTTSGGGTSCCCSSEEEEE
T ss_pred hcccCCCccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc-CCCceECCeEEecCCCcChhhcccccCcEEEEE
Confidence 99999996 6889999999999999999999986 57899999976 468999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHHhh
Q 014164 414 TVSIVSSAHFKLKAC 428 (429)
Q Consensus 414 ~~~~~~eai~l~n~~ 428 (429)
+|+|.||||+++|++
T Consensus 416 ~~~~~deAi~~aN~~ 430 (504)
T 3ek1_A 416 AFDTEEEVIAQANDT 430 (504)
T ss_dssp EECCHHHHHHHHHCS
T ss_pred EeCCHHHHHHHHhCC
Confidence 999999999999985
No 5
>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}
Probab=100.00 E-value=3.8e-84 Score=655.15 Aligned_cols=397 Identities=22% Similarity=0.327 Sum_probs=367.6
Q ss_pred ccccccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHH
Q 014164 15 GAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQ 94 (429)
Q Consensus 15 ~~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~ 94 (429)
++....++|||| +|+.+.++++++++|| +||++++ .++.++.+|+++|+++|++||+.|+.+++.+|.++
T Consensus 21 ~m~~~~~~~I~G-~~~~~~~~~~~~v~nP--------~tg~~i~-~v~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~ 90 (497)
T 3i44_A 21 SMLNKRKFYING-LWDDPSTPHDLYVIDP--------STEEACA-VISLGSTRDADKAINAAKKAFQTWKTTSPHERLGF 90 (497)
T ss_dssp -CEEECCEEETT-EEECCSSCCEEEEEET--------TTTEEEE-EEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHH
T ss_pred ccccccCeeECC-EEecCCCCCeEEeECC--------CCCCEEE-EEcCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHH
Confidence 445677999999 9999988766666555 9999988 67799999999999999999999999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEE-eecceEE
Q 014164 95 IQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEII-SEPLGVV 173 (429)
Q Consensus 95 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~Gvv 173 (429)
|++++++|+++.++|++++++|+|||+.+++..|+..+++.+++++..++.+...... ..+...++. ++|+|||
T Consensus 91 L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~-----~~~~~~~~~~~~P~GVv 165 (497)
T 3i44_A 91 VEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL-----IEGNEQAILHYDAIGVV 165 (497)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEES-----STTCSSCEEEEEECCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcccccccc-----cCCceeEEEeecCceEE
Confidence 9999999999999999999999999999997579999999999999988876542211 124457788 9999999
Q ss_pred EEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEE
Q 014164 174 LVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKIL 250 (429)
Q Consensus 174 ~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ 250 (429)
++|+|||||+...++++++||++||+||+|||+.+|+++.+|++++.++ +|+|+||+|+| +.+.++.|++|+ +|.|.
T Consensus 166 ~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I~ 245 (497)
T 3i44_A 166 GLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMIS 245 (497)
T ss_dssp EEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEE
T ss_pred EEECCCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEE
Confidence 9999999999999999999999999999999999999999999999999 99999999999 567899999997 99999
Q ss_pred EeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHH
Q 014164 251 YTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSL 330 (429)
Q Consensus 251 ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l 330 (429)
||||+.+|+.|.+.++++++|+++|+|||||+||++||| +.|++.+++++| +|+||.|++++|||||+++|++|+++|
T Consensus 246 FTGS~~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l 323 (497)
T 3i44_A 246 FTGSTRAGKDISKNASNTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCF-YNSGQSCNAPTRMLVEQAIYDKAIKTA 323 (497)
T ss_dssp EESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHH-GGGGCCTTCCCEEEEEGGGHHHHHHHH
T ss_pred EeCcHHHHHHHHHHHhhcCCceeeccCCCCceEECCChh-HHHHHHHHHHHH-hcCCCCcccCCEEEEcHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999 999999999999 999999999999999999999999999
Q ss_pred HHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCc-cCC---CCceEecEEEecCCCCCCccccC
Q 014164 331 RNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQ-RDE---KQLKIAPTILLDVPDDSTIMKEE 404 (429)
Q Consensus 331 ~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~-~~~---~g~~~~Ptvl~~~~~~~~~~~~E 404 (429)
+++++++++|+|. +++++||++++.+++++.++|+++. .|+++++||. ... .|+|++|||+.+++++|++++||
T Consensus 324 ~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE 403 (497)
T 3i44_A 324 KDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREE 403 (497)
T ss_dssp HHHHHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSC
T ss_pred HHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcCc
Confidence 9999999999996 5899999999999999999999985 5789999994 322 68999999999999999999999
Q ss_pred ccccceeeEecCCHHHHHHHHHhh
Q 014164 405 IFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 405 ~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+||||++|++|+|++|||+++|++
T Consensus 404 iFGPVl~v~~~~~~deAi~~aN~~ 427 (497)
T 3i44_A 404 IFGPVLSLLPFNTEDEAVTLANDT 427 (497)
T ss_dssp CCSSEEEEEEESSHHHHHHHHHCS
T ss_pred ccCceEEEEecCCHHHHHHHHhCC
Confidence 999999999999999999999975
No 6
>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*
Probab=100.00 E-value=4e-84 Score=657.09 Aligned_cols=399 Identities=27% Similarity=0.382 Sum_probs=369.8
Q ss_pred cccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhh-----hhcCCCHHHHH
Q 014164 18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN-----SRKTKSYEWRM 92 (429)
Q Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~-----~w~~~~~~~R~ 92 (429)
...++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++|+++|++||+ .|+.++..+|.
T Consensus 6 ~~~~~~i~g-~~~~~~~~~~~~~~nP--------~tg~~i~-~~~~~~~~~v~~av~~A~~A~~~~~~~~w~~~~~~~R~ 75 (503)
T 3iwj_A 6 PTRQLFING-DWKAPVLNKRIPVINP--------ATQNIIG-DIPAATKEDVDVAVAAAKTALTRNKGADWATASGAVRA 75 (503)
T ss_dssp CCCCEEETT-EEECCTTCCEEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHHHHGGGGTTTTSSCHHHHH
T ss_pred CCCceeECC-EEecCCCCCeEEeECC--------CCCCEEE-EEcCCCHHHHHHHHHHHHHHhhhcCCcchhhCCHHHHH
Confidence 346799999 9999988766666665 9999988 6779999999999999999999 99999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceE
Q 014164 93 SQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGV 172 (429)
Q Consensus 93 ~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gv 172 (429)
++|++++++|++++++|++++++|+|||+.+++ .|+..+++.++|+++..+++.+...........+...++.++|+||
T Consensus 76 ~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GV 154 (503)
T 3iwj_A 76 RYLRAIAAKVTEKKPELAKLESIDCGKPLDEAA-WDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPIGV 154 (503)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEECCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcCCce
Confidence 999999999999999999999999999999996 6999999999999999988765442221111234567899999999
Q ss_pred EEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCC-HHHHHHHHhcC-CCEE
Q 014164 173 VLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGA-VAETSALLEQK-WDKI 249 (429)
Q Consensus 173 v~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~-~~~~~~L~~~~-v~~v 249 (429)
|++|+|||||+...++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+|+ .+.++.|+.|+ +|.|
T Consensus 155 v~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v~~I 234 (503)
T 3iwj_A 155 VGLITPWNYPMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDVDKV 234 (503)
T ss_dssp EEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTCCEE
T ss_pred EEEECCCchHHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCccEE
Confidence 99999999999999999999999999999999999999999999999999 999999999994 57889999997 9999
Q ss_pred EEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHH
Q 014164 250 LYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDS 329 (429)
Q Consensus 250 ~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~ 329 (429)
.||||+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|++++|||||+++|++|+++
T Consensus 235 ~FTGS~~~G~~i~~~aa~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~ 313 (503)
T 3iwj_A 235 AFTGSSATGSKIMTAAAQLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCF-WTNGQICSATSRLILHESIATEFLNR 313 (503)
T ss_dssp EEESCHHHHHHHHHHHGGGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHT-GGGGCCTTCEEEEEEETTTHHHHHHH
T ss_pred EEECcHHHHHHHHHHHhcCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHH-hcCCCCcccCCeeEEcHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred HHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC---CCCceEecEEEecCCCCCCccccC
Q 014164 330 LRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD---EKQLKIAPTILLDVPDDSTIMKEE 404 (429)
Q Consensus 330 l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~---~~g~~~~Ptvl~~~~~~~~~~~~E 404 (429)
|+++++++++|+|. +++++||++++.+++++.++|+++. .|+++++||... ..|+|++|||+.+++++|++++||
T Consensus 314 l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE 393 (503)
T 3iwj_A 314 IVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWREE 393 (503)
T ss_dssp HHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHHHSC
T ss_pred HHHHHHhccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhhCce
Confidence 99999999999996 5889999999999999999999986 578999999764 468999999999999999999999
Q ss_pred ccccceeeEecCCHHHHHHHHHhh
Q 014164 405 IFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 405 ~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+||||++|++|+|++|||+++|++
T Consensus 394 iFGPVl~v~~~~~~deAi~~aN~~ 417 (503)
T 3iwj_A 394 VFGPVLCVKTFSTEEEAIDLANDT 417 (503)
T ss_dssp CCSSEEEEEEESSHHHHHHHHTCS
T ss_pred eeCceEEEEEeCCHHHHHHHHhCC
Confidence 999999999999999999999975
No 7
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Probab=100.00 E-value=1.7e-84 Score=657.83 Aligned_cols=396 Identities=21% Similarity=0.314 Sum_probs=368.5
Q ss_pred cccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHH
Q 014164 18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQS 97 (429)
Q Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~ 97 (429)
...++|||| +|+.+.++ +|+++|| +||++++ .++.++.+|+++|+++|++||+.|+.+++.+|.++|++
T Consensus 24 ~~~~~~I~G-~~~~~~~~-~~~v~nP--------~tg~~i~-~v~~~~~~dv~~Av~aA~~A~~~w~~~~~~~R~~~L~~ 92 (498)
T 4f3x_A 24 MDTQLLIGS-RFEAGTEA-EEHILNP--------RTGAGII-DLAEASHAQIDAAVDAAERAFVGWSQTTPAERSNALLK 92 (498)
T ss_dssp CCCCEEETT-EEECCCSC-EEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred cccCeeECC-EEeeCCCC-eEEEECC--------CCCCEEE-EEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Confidence 346899999 99998776 6777766 8999988 67799999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEc
Q 014164 98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIS 177 (429)
Q Consensus 98 ~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 177 (429)
++++|+++.++|++++++|+|||+.++...|+..+++.++|+++.++++.+..... ...+...++.++|+|||++|+
T Consensus 93 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~l~~~a~~~~~~~~~~~~~---~~~~~~~~~~~~P~GVv~~I~ 169 (498)
T 4f3x_A 93 IADAIEKEADEFAALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGE---YLPGHTSMIRRDPIGIVGSIA 169 (498)
T ss_dssp HHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEE---EETTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccC---CcccccceEEEcCcceEEEEC
Confidence 99999999999999999999999999944799999999999999988765433211 123556789999999999999
Q ss_pred CCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhhcCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCCh
Q 014164 178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSP 255 (429)
Q Consensus 178 p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~alP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~ 255 (429)
|||||+...++++++||++||+||+|||+.+|+++.++++++.+++|+|++|+|+| +.+.++.|++|+ +|.|.||||+
T Consensus 170 PwN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ealP~gv~nvv~g~~~~~g~~L~~~p~v~~V~FTGS~ 249 (498)
T 4f3x_A 170 PWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADILPEGVVNVITGRGETVGNALINHPKVGMVSITGDI 249 (498)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTTSCTTSEEECCCCTTTHHHHHHTCTTCCEEEEESCH
T ss_pred CCchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHhCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEECCH
Confidence 99999999999999999999999999999999999999999999999999999999 556899999997 9999999999
Q ss_pred HHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHh
Q 014164 256 RVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELK 335 (429)
Q Consensus 256 ~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~ 335 (429)
.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|++++|||||+++|++|+++|+++++
T Consensus 250 ~~G~~i~~~aa~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 328 (498)
T 4f3x_A 250 ATGKKVLAAAAKTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGY-YNAGQDCTAACRIYAEAGIYEKLVADLTSAVS 328 (498)
T ss_dssp HHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTT-GGGGCSTTCEEEEEEETTTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHH-hcCCCCccCCceEEecHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred hhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCC-EEEeCCcc-CCCCceEecEEEecCCCCCCccccCcccccee
Q 014164 336 EFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSD-KIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLP 411 (429)
Q Consensus 336 ~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~-~vl~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~ 411 (429)
++++|+|. +++++||++++.+++++.++|+++. .|+ ++++||.. +..|+|++|||+.+++++|++++||+||||++
T Consensus 329 ~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~ 408 (498)
T 4f3x_A 329 TIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVFGPVVS 408 (498)
T ss_dssp TCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSCCCSSEEE
T ss_pred hcccCCCccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCceeCcEEE
Confidence 99999996 5899999999999999999999986 577 99999976 35799999999999999999999999999999
Q ss_pred eEecCCHHHHHHHHHhh
Q 014164 412 IVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 412 v~~~~~~~eai~l~n~~ 428 (429)
|++|+|.||||+++|++
T Consensus 409 v~~~~~~deAi~~aN~~ 425 (498)
T 4f3x_A 409 VTRFTGKDDAVAWANDS 425 (498)
T ss_dssp EEEECTTSCHHHHHHSS
T ss_pred EEEeCCHHHHHHHHhcC
Confidence 99999999999999975
No 8
>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*
Probab=100.00 E-value=2.9e-84 Score=658.81 Aligned_cols=397 Identities=21% Similarity=0.337 Sum_probs=369.4
Q ss_pred ccccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHh--hhhcCCCHHHHHHH
Q 014164 17 ACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNY--NSRKTKSYEWRMSQ 94 (429)
Q Consensus 17 ~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~--~~w~~~~~~~R~~~ 94 (429)
....++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++|+++|++|| +.|+.+++.+|.++
T Consensus 30 ~~~~~~~I~G-~~~~~~~~~~~~v~nP--------~tg~~i~-~v~~~~~~dv~~Av~aA~~A~~~~~w~~~~~~~R~~~ 99 (520)
T 3ed6_A 30 HLSQRQYIDG-EWVESANKNTRDIINP--------YNQEVIF-TVSEGTKEDAERAILAARRAFESGEWSQETAETRGKK 99 (520)
T ss_dssp GSCCSEEETT-EEECCTTCCEEEEEET--------TTTEEEE-EEECCCHHHHHHHHHHHHHHHHHTTTTTSCHHHHHHH
T ss_pred ccCCceEECC-EEecCCCCCEEEeECC--------CCCCEEE-EEcCCCHHHHHHHHHHHHHhccccccccCCHHHHHHH
Confidence 3466899999 9999888766666555 9999998 677999999999999999999 89999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEE
Q 014164 95 IQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVL 174 (429)
Q Consensus 95 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~ 174 (429)
|++++++|+++.++|++++++|+|||+.+++ .|+..+++.++|++...+++.+... .. ...+...++.++|+|||+
T Consensus 100 L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~-~~--~~~~~~~~~~~~P~GVV~ 175 (520)
T 3ed6_A 100 VRAIADKIKEHREALARLETLDTGKTLEESY-ADMDDIHNVFMYFAGLADKDGGEMI-DS--PIPDTESKIVKEPVGVVT 175 (520)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHTTSCCEEEE-CC--SSTTEEEEEEEEECCEEE
T ss_pred HHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCeec-cc--CCCCCcccccccCccEEE
Confidence 9999999999999999999999999999997 6999999999999999887655332 11 113456789999999999
Q ss_pred EEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEE
Q 014164 175 VISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILY 251 (429)
Q Consensus 175 ~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~f 251 (429)
+|+|||||+...++++++||++||+||+|||+.+|+++.+|++++.++ +|+|+||+|+| +.+.++.|++|+ +|.|.|
T Consensus 176 ~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V~F 255 (520)
T 3ed6_A 176 QITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLVSF 255 (520)
T ss_dssp EECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEEEE
T ss_pred EECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEEEE
Confidence 999999999999999999999999999999999999999999999999 99999999999 567899999997 999999
Q ss_pred eCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHH
Q 014164 252 TGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLR 331 (429)
Q Consensus 252 tGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 331 (429)
|||+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|++++|||||+++|++|+++|+
T Consensus 256 TGS~~vG~~i~~~aa~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 334 (520)
T 3ed6_A 256 TGGIETGKHIMKNAANNVTNIALELGGKNPNIIFDDADFELAVDQALNGGY-FHAGQVCSAGSRILVQNSIKDKFEQALI 334 (520)
T ss_dssp ESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGTSTTCCCEEEEEHHHHHHHHHHHH
T ss_pred ECCHHHHHHHHHHhhhcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHH-hcCCCCcccCceEEEcHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC-----CCCceEecEEEecCCCCCCccccC
Q 014164 332 NELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD-----EKQLKIAPTILLDVPDDSTIMKEE 404 (429)
Q Consensus 332 ~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E 404 (429)
++++++++|+|. +++++||++++.+++++.++|+++. .|+++++||... ..|+|++|||+.+++++|++++||
T Consensus 335 ~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~eE 414 (520)
T 3ed6_A 335 DRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQEE 414 (520)
T ss_dssp HHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHHSC
T ss_pred HHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCccccCc
Confidence 999999999996 6889999999999999999999986 477999999763 468999999999999999999999
Q ss_pred ccccceeeEecCCHHHHHHHHHhh
Q 014164 405 IFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 405 ~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+||||++|++|+|+||||+++|++
T Consensus 415 iFGPVl~v~~~~~~deAi~~aN~~ 438 (520)
T 3ed6_A 415 VFGPVVTVEGFETEQEAIQLANDS 438 (520)
T ss_dssp CCSSEEEEEEESSHHHHHHHHTCS
T ss_pred eeCcEEEEEEeCCHHHHHHHHhCC
Confidence 999999999999999999999975
No 9
>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A
Probab=100.00 E-value=6.7e-84 Score=658.67 Aligned_cols=403 Identities=20% Similarity=0.311 Sum_probs=370.4
Q ss_pred hhhhhcccccccceeeecceeeccCCccccccccCCceEeeeCCc-chhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCC
Q 014164 9 FQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSAT-MAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKS 87 (429)
Q Consensus 9 ~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~t-g~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~ 87 (429)
+.++....+.+.++|||| +|+. ++.+++++|| +| |++++ .++.++.+|+++|+++|++||+.|+.++
T Consensus 27 ~~~~~~~~~~~~~~~I~G-~~~~--~~~~~~~~nP--------~t~~~~i~-~~~~~~~~dv~~av~aA~~A~~~w~~~~ 94 (538)
T 3qan_A 27 LGLVEKELGKEYPLIING-ERVT--TEDKIQSWNP--------ARKDQLVG-SVSKANQDLAEKAIQSADEAFQTWRNVN 94 (538)
T ss_dssp HHHHHHHTTEEECEEETT-EEEC--CSSEEEEECS--------SSTTCEEE-EEECBCHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHhhhccCcccceeECC-EEec--CCCeEEEECC--------CCCCcEEE-EEcCCCHHHHHHHHHHHHHHHHhhccCC
Confidence 344444556678999999 9998 5655555555 99 99888 7779999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEe
Q 014164 88 YEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIIS 167 (429)
Q Consensus 88 ~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (429)
+.+|.++|++++++|++++++|++++++|+|||+.+++ .|+..+++.++|+++.+.++..++.... ..+...++.+
T Consensus 95 ~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~~~~~~~~---~~~~~~~~~~ 170 (538)
T 3qan_A 95 PEERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEAD-ADTAEAIDFLEYYARQMIELNRGKEILS---RPGEQNRYFY 170 (538)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHTCBCCCC---CTTEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCeeecc---cCCcceeeec
Confidence 99999999999999999999999999999999999997 5999999999999998655555443322 1255678999
Q ss_pred ecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC
Q 014164 168 EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK 245 (429)
Q Consensus 168 ~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~ 245 (429)
+|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.+|++++.++ +|+|+||+|+| +.+.++.|++|+
T Consensus 171 ~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p 250 (538)
T 3qan_A 171 TPMGVTVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHP 250 (538)
T ss_dssp EECCEEEEECCSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCT
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999999999999999999 99999999999 567899999997
Q ss_pred -CCEEEEeCChHHHHHHHHHHhcc------cCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEE
Q 014164 246 -WDKILYTGSPRVGRIVMAAAAKH------LTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIIT 318 (429)
Q Consensus 246 -v~~v~ftGs~~~~~~i~~~~~~~------~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V 318 (429)
+|.|.||||+.+|+.|.+.++++ ++|+++|+|||||+||++|||++.|++.+++++| .|+||.|+++++|||
T Consensus 251 ~v~~I~FTGS~~~G~~i~~~aa~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV 329 (538)
T 3qan_A 251 KTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAF-GFSGQKCSAGSRAVI 329 (538)
T ss_dssp TEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCCCEEEE
T ss_pred CcCEEEEECCHHHHHHHHHHhhhccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHH-hcCCCCCccCceeEE
Confidence 99999999999999999999988 9999999999999999999999999999999999 999999999999999
Q ss_pred eCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhhcCCEEEeCCccCC-CCceEecEEEecCCC
Q 014164 319 TKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDE-KQLKIAPTILLDVPD 396 (429)
Q Consensus 319 ~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg~~~~-~g~~~~Ptvl~~~~~ 396 (429)
|+++|++|+++|+++++++++|+|. +++++||++++.+++++.++|+++...+++++||..+. .|+|++|||+.++++
T Consensus 330 ~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~~~~gG~~~~~~g~~~~PTvl~~v~~ 409 (538)
T 3qan_A 330 HKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEGRLMTGGEGDSSTGFFIQPTIIADLDP 409 (538)
T ss_dssp ETTTHHHHHHHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHSEEEECCCEECSSSCEECCEEEESCCT
T ss_pred ehHHHHHHHHHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCCeEEeCCCcCCCCCceeCCeeeecCCC
Confidence 9999999999999999999999996 68999999999999999999999865339999998744 699999999999999
Q ss_pred CCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014164 397 DSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 397 ~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+|++++||+||||++|++|+|++|||+++|++
T Consensus 410 ~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~ 441 (538)
T 3qan_A 410 EAVIMQEEIFGPVVAFSKANDFDHALEIANNT 441 (538)
T ss_dssp TSHHHHSCCCSSEEEEEEESSHHHHHHHHHCS
T ss_pred CChhhCCCcCCcEEEEEEeCCHHHHHHHHhcC
Confidence 99999999999999999999999999999975
No 10
>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*
Probab=100.00 E-value=3.9e-84 Score=657.36 Aligned_cols=397 Identities=20% Similarity=0.304 Sum_probs=366.0
Q ss_pred cceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhh--hhcCCCHHHHHHHHHH
Q 014164 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN--SRKTKSYEWRMSQIQS 97 (429)
Q Consensus 20 ~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~~ 97 (429)
.++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++|+++|++||+ .|+.+++.+|.++|++
T Consensus 37 ~~~~I~G-~~~~~~~~~~~~v~nP--------~tg~~i~-~v~~a~~~dv~~av~aA~~A~~~g~w~~~~~~~R~~~L~~ 106 (517)
T 2o2p_A 37 YQLFIGG-EFVDAEGSKTYNTINP--------TDGSVIC-QVSLAQVSDVDKAVAAAKEAFENGLWGKINARDRGRLLYR 106 (517)
T ss_dssp CSEEETT-EEECCGGGCEEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHHHHTSGGGTSCHHHHHHHHHH
T ss_pred CCeEECC-EEecCCCCCeEEEECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHHH
Confidence 4689999 9999877755555555 9999998 6779999999999999999999 9999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccc-cCCCCcceEEeecceEEEEE
Q 014164 98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSL-TTYPSSAEIISEPLGVVLVI 176 (429)
Q Consensus 98 ~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gvv~~i 176 (429)
++++|+++.++|++++++|+|||+.+++..|+..+++.++|+++.++++.+... +... ...+...++.++|+|||++|
T Consensus 107 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~-~~~~~~~~~~~~~~~~~P~GVV~~I 185 (517)
T 2o2p_A 107 LADVMEQHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATI-PINQARPNRNLTLTKKEPVGVCGIV 185 (517)
T ss_dssp HHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHHHGGGCCEEEE-CCCCCTTSCEEEEEEEEECCEEEEE
T ss_pred HHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-cccccCCCCceEEEEecCCccEEEE
Confidence 999999999999999999999999999646999999999999999988765432 1110 01122568999999999999
Q ss_pred cCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeC
Q 014164 177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTG 253 (429)
Q Consensus 177 ~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftG 253 (429)
+|||||+...++++++||++||+||+|||+.+|+++.+|++++.++ +|+|++|+|+| +.+.++.|++|+ ++.|.|||
T Consensus 186 ~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~v~~V~FTG 265 (517)
T 2o2p_A 186 IPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPDVRKIGFTG 265 (517)
T ss_dssp CCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTTCCEEEEES
T ss_pred CCCcchHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCCCCEEEEEC
Confidence 9999999999999999999999999999999999999999999999 99999999999 456889999997 99999999
Q ss_pred ChHHHHHHHHHHh-cccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHH
Q 014164 254 SPRVGRIVMAAAA-KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN 332 (429)
Q Consensus 254 s~~~~~~i~~~~~-~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~ 332 (429)
|+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++|++|+++|++
T Consensus 266 S~~~G~~I~~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~ 344 (517)
T 2o2p_A 266 STEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVF-FNKGENCIAAGRLFVEESIHNQFVQKVVE 344 (517)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCeEEEEeHHHHHHHHHHHHH
Confidence 9999999999999 899999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccCC-CCceEecEEEecCCCCCCccccCccccc
Q 014164 333 ELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRDE-KQLKIAPTILLDVPDDSTIMKEEIFGPL 409 (429)
Q Consensus 333 ~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~-~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 409 (429)
+++++++|+|. +++++||++++.+++++.++|+++. .|+++++||..+. .|+|++|||+.+++++|++++||+||||
T Consensus 345 ~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPV 424 (517)
T 2o2p_A 345 EVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEESFGPI 424 (517)
T ss_dssp HHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGTSCCCSSE
T ss_pred HHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhhccccccE
Confidence 99999999996 6899999999999999999999986 5789999997643 6899999999999999999999999999
Q ss_pred eeeEecCC--HHHHHHHHHhh
Q 014164 410 LPIVTVSI--VSSAHFKLKAC 428 (429)
Q Consensus 410 ~~v~~~~~--~~eai~l~n~~ 428 (429)
++|++|+| ++|||+++|++
T Consensus 425 l~v~~~~~~~~deAi~~aN~~ 445 (517)
T 2o2p_A 425 MIISRFADGDVDAVLSRANAT 445 (517)
T ss_dssp EEEEEECTTCSHHHHHHHTCS
T ss_pred EEEEEcCCCCHHHHHHHHhcC
Confidence 99999999 99999999975
No 11
>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*
Probab=100.00 E-value=6.2e-84 Score=654.21 Aligned_cols=396 Identities=24% Similarity=0.345 Sum_probs=367.4
Q ss_pred cccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhh---hhcCCCHHHHHHH
Q 014164 18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN---SRKTKSYEWRMSQ 94 (429)
Q Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~---~w~~~~~~~R~~~ 94 (429)
...++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++|+++|++||+ .|+.+++.+|.++
T Consensus 19 ~~~~~~i~G-~~~~~~~~~~~~v~nP--------~tg~~i~-~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~ 88 (501)
T 1bxs_A 19 KYTKIFINN-EWHSSVSGKKFPVFNP--------ATEEKLC-EVEEGDKEDVDKAVKAARQAFQIGSPWRTMDASERGRL 88 (501)
T ss_dssp CCCSEEETT-EEECCTTCCEEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHH
T ss_pred cccCeeECC-EEecCCCCCeEEEECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHhhcccchhhCCHHHHHHH
Confidence 345789999 9999877755555555 9999998 7779999999999999999999 8999999999999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEE
Q 014164 95 IQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVL 174 (429)
Q Consensus 95 L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~ 174 (429)
|++++++|++++++|++++++|+|||+.++...|+..+++.++|+++.++++.+..... ..+...++.++|+|||+
T Consensus 89 L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~----~~~~~~~~~~~P~GVV~ 164 (501)
T 1bxs_A 89 LNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPM----DGNFFTYTRSEPVGVCG 164 (501)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECC----SSSEEEEEEEEECCEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeec----cCCcceeEEecCCceEE
Confidence 99999999999999999999999999998766799999999999999999887643211 12345688999999999
Q ss_pred EEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEE
Q 014164 175 VISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILY 251 (429)
Q Consensus 175 ~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~f 251 (429)
+|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++ +|+|++|+|+| +.+.++.|++|+ +|.|.|
T Consensus 165 ~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~F 244 (501)
T 1bxs_A 165 QIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAF 244 (501)
T ss_dssp EECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEE
T ss_pred EECCCcchHHHHHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEE
Confidence 999999999999999999999999999999999999999999999999 99999999999 667899999997 999999
Q ss_pred eCChHHHHHHHHHHh-cccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHH
Q 014164 252 TGSPRVGRIVMAAAA-KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSL 330 (429)
Q Consensus 252 tGs~~~~~~i~~~~~-~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l 330 (429)
|||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|+++++||||+++|++|+++|
T Consensus 245 TGS~~~G~~i~~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l 323 (501)
T 1bxs_A 245 TGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVF-YHQGQCCIAASRLFVEESIYDEFVRRS 323 (501)
T ss_dssp ESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-TTTTCCTTCCCEEEEEHHHHHHHHHHH
T ss_pred ECCHHHHHHHHHHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCCCCCEEEEchhHHHHHHHHH
Confidence 999999999999999 999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC-CCCceEecEEEecCCCCCCccccCccc
Q 014164 331 RNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFG 407 (429)
Q Consensus 331 ~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fg 407 (429)
+++++++++|+|. +++++||++++.+++++.++|+++. .|+++++||..+ ..|+|++|||+.+++++|.+++||+||
T Consensus 324 ~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFG 403 (501)
T 1bxs_A 324 VERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFG 403 (501)
T ss_dssp HHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCS
T ss_pred HHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhccccc
Confidence 9999999999996 5899999999999999999999986 577999999763 468999999999999999999999999
Q ss_pred cceeeEecCCHHHHHHHHHhh
Q 014164 408 PLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 408 Pv~~v~~~~~~~eai~l~n~~ 428 (429)
||++|++|+|+||||+++|++
T Consensus 404 PVl~v~~~~~~deAi~~aN~~ 424 (501)
T 1bxs_A 404 PVQQIMKFKSLDDVIKRANNT 424 (501)
T ss_dssp SEEEEEEECCHHHHHHHHHCS
T ss_pred ceEEEEEeCCHHHHHHHHhcC
Confidence 999999999999999999975
No 12
>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*
Probab=100.00 E-value=1.5e-83 Score=652.20 Aligned_cols=398 Identities=23% Similarity=0.326 Sum_probs=368.4
Q ss_pred ccccccceeeecceeeccCCccc-cccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHH
Q 014164 15 GAACLNKSFIYNYTYRKNQTHIS-FPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMS 93 (429)
Q Consensus 15 ~~~~~~~~~i~g~~~~~~~~~~~-~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~ 93 (429)
...+..++|||| +|+.+.++.+ ++++|| +||++++ .++.++.+|+++|+++|++||+.|+.++..+|.+
T Consensus 15 ~~~~~~~~~i~g-~~~~~~~~~~~~~v~nP--------~tg~~i~-~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~ 84 (503)
T 1a4s_A 15 VVVTDDLNYWGG-RRIKSKDGATTEPVFEP--------ATGRVLC-QMVPCGAEEVDQAVQSAQAAYLKWSKMAGIERSR 84 (503)
T ss_dssp CCCCSCCEEETT-EEECCCTTCCCEEEECT--------TTCCEEE-EECCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHH
T ss_pred ccccccceeECC-EEecCCCCCceEEEECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHHHhcccCCHHHHHH
Confidence 344556799999 9999877755 566555 9999998 7779999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEE
Q 014164 94 QIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVV 173 (429)
Q Consensus 94 ~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv 173 (429)
+|++++++|+++.++|++++++|+|||+.++. .|+..+++.++|+++..+++.+... ... .+...++.++|+|||
T Consensus 85 ~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~-~~~---~~~~~~~~~~P~GVv 159 (503)
T 1a4s_A 85 VMLEAARIIRERRDNIAKLEVINNGKTITEAE-YDIDAAWQCIEYYAGLAPTLSGQHI-QLP---GGAFAYTRREPLGVC 159 (503)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEEEE-ECG---GGCEEEEEEEECSEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcc-cCC---CCceeEEEEecCceE
Confidence 99999999999999999999999999999995 6999999999999999988765322 111 234678999999999
Q ss_pred EEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCCHHHHHHHHhcC-CCEEEE
Q 014164 174 LVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILY 251 (429)
Q Consensus 174 ~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~f 251 (429)
++|+|||||+...++++++||++||+||+|||+.+|+++.++++++.++ +|+|++|+|+|+.+.++.|++|+ +|.|.|
T Consensus 160 ~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~~~g~~L~~~p~v~~V~F 239 (503)
T 1a4s_A 160 AGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSF 239 (503)
T ss_dssp EEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEE
T ss_pred EEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCchHHHHHHhCCCcCEEEE
Confidence 9999999999999999999999999999999999999999999999999 99999999999447889999997 999999
Q ss_pred eCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHH
Q 014164 252 TGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLR 331 (429)
Q Consensus 252 tGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 331 (429)
|||+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|+++++||||+++|++|+++|+
T Consensus 240 TGS~~~G~~i~~~aa~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 318 (503)
T 1a4s_A 240 TGSVPTGKKVMEMSAKTVKHVTLELGGKSPLLIFKDCELENAVRGALMANF-LTQGQVCTNGTRVFVQREIMPQFLEEVV 318 (503)
T ss_dssp ESCHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTC-GGGGCCTTCCCEEEEEGGGHHHHHHHHH
T ss_pred eCCHHHHHHHHHHhhhcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCcEEEEehHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC-------CCCceEecEEEecCCCCCCccc
Q 014164 332 NELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD-------EKQLKIAPTILLDVPDDSTIMK 402 (429)
Q Consensus 332 ~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~-------~~g~~~~Ptvl~~~~~~~~~~~ 402 (429)
++++++++|+|. +++++||++++.+++++.++|+++. .|+++++||..+ ..|+|++|||+.+++++|++++
T Consensus 319 ~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~ 398 (503)
T 1a4s_A 319 KRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVK 398 (503)
T ss_dssp HHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHH
T ss_pred HHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHh
Confidence 999999999996 5899999999999999999999986 478999999764 3589999999999999999999
Q ss_pred cCccccceeeEecCCHHHHHHHHHhh
Q 014164 403 EEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 403 ~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
||+||||++|++|+|++|||+++|++
T Consensus 399 eEiFGPVl~v~~~~~~deAi~~aN~~ 424 (503)
T 1a4s_A 399 EEIFGPVMSVLPFDTEEEVLQRANNT 424 (503)
T ss_dssp SCCCSSEEEEEEECCHHHHHHHHHCS
T ss_pred ccccCceEEEEecCCHHHHHHHHhcC
Confidence 99999999999999999999999975
No 13
>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.4e-83 Score=654.90 Aligned_cols=397 Identities=24% Similarity=0.351 Sum_probs=369.9
Q ss_pred ccccceeeecceeeccCCccccccccCCceEeeeCCc-chhhhhcccCCCHHHHHHHHHHHHHHh--hhhcCCCHHHHHH
Q 014164 17 ACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSAT-MAAEEKQMQRFDVEKAASLMKELRNNY--NSRKTKSYEWRMS 93 (429)
Q Consensus 17 ~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~t-g~~~~~~~~~~~~~dv~~av~aA~~A~--~~w~~~~~~~R~~ 93 (429)
.+..++|||| +|+.+.++.+++++|| +| |++++ .++.++.+|+++|+++|++|| ..|+.++..+|.+
T Consensus 20 ~~~~~~~I~G-~~~~~~~~~~~~v~nP--------~t~g~~i~-~~~~~~~~dv~~av~aA~~A~~~~~w~~~~~~~R~~ 89 (528)
T 3u4j_A 20 KSRYQMLVDG-KSVDAASGSTIDRVSP--------GHAGEVVG-TWPEASADDVRKAVAAARKAFDAGPWPRMSGAERSR 89 (528)
T ss_dssp CCBCCEEETT-EEECCTTCCEEEEECT--------TSTTCEEE-EEECCCHHHHHHHHHHHHHHHHTSSGGGSCHHHHHH
T ss_pred ccccceeECC-EEecCCCCCEEEEeCC--------CCCCcEEE-EEeCCCHHHHHHHHHHHHHhccccccccCCHHHHHH
Confidence 4466899999 9999988866666666 99 99998 777999999999999999999 7899999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEE
Q 014164 94 QIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVV 173 (429)
Q Consensus 94 ~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv 173 (429)
+|++++++|+++.++|++++++|+|||+.++ ..|+..+++.++|+++.++++.+... +. ...+...++.++|+|||
T Consensus 90 ~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea-~~ev~~~~~~l~~~a~~~~~~~~~~~-~~--~~~~~~~~~~~~P~GVV 165 (528)
T 3u4j_A 90 LMFKVADLILARQEELALIESLEVGKPIAQA-RGEIGFCADLWSYAAGQARALEGQTH-NN--IGDDRLGLVLREPVGVV 165 (528)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHTTCCEEEE-CC--SCTTEEEEEEEEECCEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHHHHHHHHHHhcCeee-cc--CCCCceeEEEeccceEE
Confidence 9999999999999999999999999999999 47999999999999999988764332 11 11345678999999999
Q ss_pred EEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEE
Q 014164 174 LVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKIL 250 (429)
Q Consensus 174 ~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ 250 (429)
++|+|||||+...++++++||++||+||+|||+.+|+++.+|++++.++ +|+|+||+|+| +.+.++.|++|+ ||.|.
T Consensus 166 ~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~ 245 (528)
T 3u4j_A 166 GIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMVA 245 (528)
T ss_dssp EEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEEE
T ss_pred EEECCCccHHHHHHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEEE
Confidence 9999999999999999999999999999999999999999999999999 99999999999 667899999997 99999
Q ss_pred EeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHH
Q 014164 251 YTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSL 330 (429)
Q Consensus 251 ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l 330 (429)
||||+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++|++|+++|
T Consensus 246 FTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l 324 (528)
T 3u4j_A 246 FTGSVRVGTKLGEIAARTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVY-HNAGQCCISGSRLLVQEGIRDALMERL 324 (528)
T ss_dssp EESCHHHHHHHHHHHHTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEGGGHHHHHHHH
T ss_pred EeCCHHHHHHHHHHHHhcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHh-hcCCCCCcCCCEEEEechHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccCC--CCceEecEEEecCCCCCCccccCcc
Q 014164 331 RNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRDE--KQLKIAPTILLDVPDDSTIMKEEIF 406 (429)
Q Consensus 331 ~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~--~g~~~~Ptvl~~~~~~~~~~~~E~f 406 (429)
+++++++++|+|. +++++||++++.+++++.++|+++. .|+++++||..+. .|+|++|||+.+++++|++++||+|
T Consensus 325 ~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiF 404 (528)
T 3u4j_A 325 LDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIF 404 (528)
T ss_dssp HHHHHHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCCC
T ss_pred HHHHHhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCccccceee
Confidence 9999999999996 5899999999999999999999986 5779999997643 7999999999999999999999999
Q ss_pred ccceeeEecCCHHHHHHHHHhh
Q 014164 407 GPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 407 gPv~~v~~~~~~~eai~l~n~~ 428 (429)
|||++|++|+|.+|||+++|++
T Consensus 405 GPVl~v~~~~~~deAi~~aN~~ 426 (528)
T 3u4j_A 405 GPVLSTLTFKTADEAVALANAT 426 (528)
T ss_dssp SSEEEEEEESSHHHHHHHHHCS
T ss_pred ccEEEEEEeCCHHHHHHHHhcC
Confidence 9999999999999999999975
No 14
>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=1.3e-83 Score=654.03 Aligned_cols=396 Identities=20% Similarity=0.247 Sum_probs=366.4
Q ss_pred cccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHH
Q 014164 18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQS 97 (429)
Q Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~ 97 (429)
...++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++|+++|++||+.|+.+++.+|.++|++
T Consensus 25 ~~~~~~I~G-~~~~~~~~~~~~v~nP--------~tg~~i~-~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~~ 94 (521)
T 4e4g_A 25 YELGHFIDG-KRVAGTSGRVSNIFNP--------ATGEVQG-TVALASDADLAAAVESAKAAQPKWAATNPQRRARVFMK 94 (521)
T ss_dssp EEECEEETT-EEECCSSSCEEEEEET--------TTTEEEE-EEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred hccCeeECC-EEecCCCCCEEEEECC--------CCCCEEE-EEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Confidence 456899999 9999988766666555 9999998 67799999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEc
Q 014164 98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIS 177 (429)
Q Consensus 98 ~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 177 (429)
++++|++++++|++++++|+|||..+++ .|+..+++.++|+++..+...+ .... ....+...++.++|+|||++|+
T Consensus 95 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~~-~~~~--~~~~~~~~~~~~~P~GVV~~I~ 170 (521)
T 4e4g_A 95 FVQLLNDNMNELAEMLSREHGKTIDDAK-GDIVRGLEVCEFVIGIPHLQKS-EFTE--GAGPGIDMYSIRQPVGIGAGIT 170 (521)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCSCHHHHH-HHHHHHHHHHHHHHTHHHHTCE-EEEE--EEETTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcC-cccc--cCCCCcceeEEEcCCcEEEEEC
Confidence 9999999999999999999999999996 6999999999999986654332 2211 1123446789999999999999
Q ss_pred CCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCCHHHHHHHHhcC-CCEEEEeCCh
Q 014164 178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSP 255 (429)
Q Consensus 178 p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~ftGs~ 255 (429)
|||||+...++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+++|+.+.+..|++|+ +|.|.||||+
T Consensus 171 PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~FTGS~ 250 (521)
T 4e4g_A 171 PFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGDKGAVDAILTHPDIAAVSFVGST 250 (521)
T ss_dssp CSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEESCH
T ss_pred CCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCChHHHHHHHhCCCcCEEEEECCH
Confidence 999999999999999999999999999999999999999999999 99999999999888889999997 9999999999
Q ss_pred HHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCC-chHHHHHHHHHHH
Q 014164 256 RVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD-FAPKLIDSLRNEL 334 (429)
Q Consensus 256 ~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~-~~~~f~~~l~~~~ 334 (429)
.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|+|||++ +|++|+++|++++
T Consensus 251 ~vG~~i~~~aa~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~ 329 (521)
T 4e4g_A 251 PIARYVYGTAAMNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGY-GSAGERCMAISVAVPVGEETANRLIDKLVPMV 329 (521)
T ss_dssp HHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTSEEEEEEBSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHH-hCCCCCcccCeEEEEeCchHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 999999999999999999 9999999999999
Q ss_pred hhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCcc-----CCCCceEecEEEecCCCCCCccccCccc
Q 014164 335 KEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQR-----DEKQLKIAPTILLDVPDDSTIMKEEIFG 407 (429)
Q Consensus 335 ~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~-----~~~g~~~~Ptvl~~~~~~~~~~~~E~fg 407 (429)
+++++|+|. +++++||++++.+++++.++|+++. .|+++++||.. +..|+|++|||+.+++++|++++||+||
T Consensus 330 ~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFG 409 (521)
T 4e4g_A 330 ESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYKTEIFG 409 (521)
T ss_dssp HTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCS
T ss_pred HhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhcCcccC
Confidence 999999996 6889999999999999999999986 57899999964 2468999999999999999999999999
Q ss_pred cceeeEecCCHHHHHHHHHhh
Q 014164 408 PLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 408 Pv~~v~~~~~~~eai~l~n~~ 428 (429)
||++|++|+|++|||+++|++
T Consensus 410 PVl~v~~~~~~deAi~~aN~~ 430 (521)
T 4e4g_A 410 PVLSVVRARNYEEALSLPMKH 430 (521)
T ss_dssp SEEEECCBSSHHHHHHHHHHS
T ss_pred cEEEEEEeCCHHHHHHHHhcC
Confidence 999999999999999999975
No 15
>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...
Probab=100.00 E-value=1.2e-83 Score=651.85 Aligned_cols=394 Identities=24% Similarity=0.360 Sum_probs=365.9
Q ss_pred cceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhh---hhcCCCHHHHHHHHH
Q 014164 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN---SRKTKSYEWRMSQIQ 96 (429)
Q Consensus 20 ~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~---~w~~~~~~~R~~~L~ 96 (429)
.++|||| +|+.+.++.+++++| |+||++++ .++.++.+|+++|+++|++||+ .|+.+++.+|.++|+
T Consensus 20 ~~~~i~G-~~~~~~~~~~~~v~n--------P~tg~~i~-~~~~~~~~~v~~av~~A~~A~~~~~~w~~~~~~~R~~~L~ 89 (500)
T 1o04_A 20 NQIFINN-EWHDAVSRKTFPTVN--------PSTGEVIC-QVAEGDKEDVDKAVKAARAAFQLGSPWRRMDASHRGRLLN 89 (500)
T ss_dssp CSEEETT-EEECCTTCCEEEEEE--------TTTTEEEE-EEECBCHHHHHHHHHHHHHHTSTTSHHHHSCHHHHHHHHH
T ss_pred cCeeECC-EEecCCCCCeEEEEC--------CCCCCEEE-EEeCCCHHHHHHHHHHHHHHhhcccccccCCHHHHHHHHH
Confidence 3689999 999987765555555 59999998 7779999999999999999999 899999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEE
Q 014164 97 SIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVI 176 (429)
Q Consensus 97 ~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i 176 (429)
+++++|++++++|++++++|+|||+.++...|+..+++.++|+++.++++.+.... . ..+...++.++|+|||++|
T Consensus 90 ~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~-~---~~~~~~~~~~~P~GVv~~I 165 (500)
T 1o04_A 90 RLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIP-I---DGDFFSYTRHEPVGVCGQI 165 (500)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEEC-C---SSSEEEEEEEEECCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCccee-c---CCCceEEEEEecCCcEEEE
Confidence 99999999999999999999999999876679999999999999999887664321 1 1234568899999999999
Q ss_pred cCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeC
Q 014164 177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTG 253 (429)
Q Consensus 177 ~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftG 253 (429)
+|||||+...++++++||++||+||+|||+.+|+++.+|++++.++ +|+|+||+|+| +.+.+..|++|+ +|.|.|||
T Consensus 166 ~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTG 245 (500)
T 1o04_A 166 IPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVAFTG 245 (500)
T ss_dssp CCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEEEES
T ss_pred CCCCchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEEEEC
Confidence 9999999999999999999999999999999999999999999999 99999999999 667899999997 99999999
Q ss_pred ChHHHHHHHHHHh-cccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHH
Q 014164 254 SPRVGRIVMAAAA-KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRN 332 (429)
Q Consensus 254 s~~~~~~i~~~~~-~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~ 332 (429)
|+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|+++++||||+++|++|+++|++
T Consensus 246 S~~~G~~i~~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~ 324 (500)
T 1o04_A 246 STEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALF-FNQGQCSCAGSRTFVQEDIYDEFVERSVA 324 (500)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHh-ccCCCCCCCCCEEEEehhHHHHHHHHHHH
Confidence 9999999999999 999999999999999999999999999999999999 99999999999999999999999999999
Q ss_pred HHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC-CCCceEecEEEecCCCCCCccccCccccc
Q 014164 333 ELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD-EKQLKIAPTILLDVPDDSTIMKEEIFGPL 409 (429)
Q Consensus 333 ~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 409 (429)
+++++++|+|. +++++||++++.+++++.++|+++. .|+++++||..+ ..|+|++|||+.+++++|++++||+||||
T Consensus 325 ~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPV 404 (500)
T 1o04_A 325 RAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPV 404 (500)
T ss_dssp HHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCSSE
T ss_pred HHHhCcCCCcccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccceE
Confidence 99999999996 5899999999999999999999986 577999999764 36899999999999999999999999999
Q ss_pred eeeEecCCHHHHHHHHHhh
Q 014164 410 LPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 410 ~~v~~~~~~~eai~l~n~~ 428 (429)
++|++|+|+||||+++|++
T Consensus 405 l~v~~~~~~deAi~~aN~~ 423 (500)
T 1o04_A 405 MQILKFKTIEEVVGRANNS 423 (500)
T ss_dssp EEEEEECCHHHHHHHHHCS
T ss_pred EEEEeeCCHHHHHHHHhcC
Confidence 9999999999999999975
No 16
>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}
Probab=100.00 E-value=1.2e-83 Score=652.66 Aligned_cols=397 Identities=22% Similarity=0.313 Sum_probs=368.6
Q ss_pred ccccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHH
Q 014164 17 ACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQ 96 (429)
Q Consensus 17 ~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~ 96 (429)
.+..++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++|+++|++||+.|+.++..+|.++|+
T Consensus 10 ~~~~~~~I~G-~~~~~~~~~~~~~~nP--------~tg~~i~-~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~ 79 (497)
T 3k2w_A 10 FKNKVNFIGG-QYVPSNESDTIDILSP--------STGKVIG-EIPAGCKADAENALEVAQAAQKAWAKLTARTRQNMLR 79 (497)
T ss_dssp CCTTCEEETT-EEECCSSCCEEEEECS--------SSCSEEE-EEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHH
T ss_pred ccccceeECC-EEecCCCCCEEEEECC--------CCCCEEE-EEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHH
Confidence 4556899999 9999988866666666 8999998 6779999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEE
Q 014164 97 SIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVI 176 (429)
Q Consensus 97 ~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i 176 (429)
++++.|+++.++|++++++|+|||+.+++ .|+..+++.++|++..++++.+..... ...+...++.++|+|||++|
T Consensus 80 ~~a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~~---~~~~~~~~~~~~P~GVV~~I 155 (497)
T 3k2w_A 80 TFANKIRENKHILAPMLVAEQGKLLSVAE-MEVDVTATFIDYGCDNALTIEGDILPS---DNQDEKIYIHKVPRGVVVGI 155 (497)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHTTTTCCEEEEEC---SSTTEEEEEEEEECSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccc---CCCCcceeEEEcCCceEEEE
Confidence 99999999999999999999999999997 699999999999999998876543211 12355678999999999999
Q ss_pred cCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeC
Q 014164 177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTG 253 (429)
Q Consensus 177 ~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftG 253 (429)
+|||||+...++++++||++||+||+|||+.+|+++.+|++++.++ +|+|+||+|+| +.+.++.|++|+ +|.|.|||
T Consensus 156 ~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTG 235 (497)
T 3k2w_A 156 TAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMITMTG 235 (497)
T ss_dssp CCSSSHHHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEEEEES
T ss_pred CCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEEEEEC
Confidence 9999999999999999999999999999999999999999999999 99999999999 567899999997 99999999
Q ss_pred ChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHH
Q 014164 254 SPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNE 333 (429)
Q Consensus 254 s~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~ 333 (429)
|+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|+++++||||+++|++|+++|+++
T Consensus 236 S~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~ 314 (497)
T 3k2w_A 236 STVAGKQIYKTSAEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRF-ANCGQVCTCVERLYVHASVYDEFMAKFLPL 314 (497)
T ss_dssp CHHHHHHHHHHHTTTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEETTTHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhhhcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHH-hCCCCCCcCCcEEEEeHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCcc---CC--CCceEecEEEecCCCCCCccccCcc
Q 014164 334 LKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQR---DE--KQLKIAPTILLDVPDDSTIMKEEIF 406 (429)
Q Consensus 334 ~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~---~~--~g~~~~Ptvl~~~~~~~~~~~~E~f 406 (429)
++++++|+|. +++++||++++.+++++.++|+++. .|+++++||.. +. .|+|++|||+.+++++|++++||+|
T Consensus 315 ~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiF 394 (497)
T 3k2w_A 315 VKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETF 394 (497)
T ss_dssp HHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHHSCCC
T ss_pred HHhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhcCCcc
Confidence 9999999996 5889999999999999999999986 47899999972 22 6899999999999999999999999
Q ss_pred ccceeeEecCCHHHHHHHHHhh
Q 014164 407 GPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 407 gPv~~v~~~~~~~eai~l~n~~ 428 (429)
|||++|++|+|+||||+++|++
T Consensus 395 GPVl~v~~~~~~deAi~~aN~~ 416 (497)
T 3k2w_A 395 GPILPIVKVSSMEQAIEFCNDS 416 (497)
T ss_dssp SSEEEEEEESCHHHHHHHHTCS
T ss_pred CcEEEEEEeCCHHHHHHHHhcC
Confidence 9999999999999999999975
No 17
>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=2e-83 Score=650.16 Aligned_cols=395 Identities=24% Similarity=0.346 Sum_probs=366.9
Q ss_pred ccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhh--hhcCCCHHHHHHHHH
Q 014164 19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN--SRKTKSYEWRMSQIQ 96 (429)
Q Consensus 19 ~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~--~w~~~~~~~R~~~L~ 96 (429)
..++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++|+++|++||+ .|+.+++.+|.++|+
T Consensus 8 ~~~~~i~G-~~~~~~~~~~~~~~nP--------~tg~~i~-~~~~~~~~~v~~av~~A~~A~~~g~w~~~~~~~R~~~L~ 77 (495)
T 3b4w_A 8 YDKLFIGG-KWTKPSTSDVIEVRCP--------ATGEYVG-KVPMAAAADVDAAVAAARAAFDNGPWPSTPPHERAAVIA 77 (495)
T ss_dssp CSSEEETT-EEECCSSCCEEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHHHHHSSTTTSCHHHHHHHHH
T ss_pred ccceeECC-EEecCCCCCeEEEECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHhcccCccccCCHHHHHHHHH
Confidence 33689999 9999877755555555 9999998 7779999999999999999999 999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEE
Q 014164 97 SIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVI 176 (429)
Q Consensus 97 ~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i 176 (429)
+++++|++++++|++++++|+|||+.+++..|+..+++.++|+++.++++.+... +. ..+...++.++|+|||++|
T Consensus 78 ~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~-~~---~~~~~~~~~~~P~GVv~~I 153 (495)
T 3b4w_A 78 AAVKMLAERKDLFTKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTET-RT---GSYGQSIVSREPVGVVGAI 153 (495)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTTHHHHHHHHHHHTCGGGSCSEEE-EE---ETTEEEEEEEEECCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-cC---CCCceEEEEEccCceEEEE
Confidence 9999999999999999999999999999646999999999999999988776432 11 1233568999999999999
Q ss_pred cCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCCHHHHHHHHhcC-CCEEEEeCC
Q 014164 177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGS 254 (429)
Q Consensus 177 ~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~ftGs 254 (429)
+|||||+...++++++||++||+||+|||+.+|+++.+|++++.++ +|+|++|+|+|+.+.++.|++|+ +|.|.||||
T Consensus 154 ~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~FTGS 233 (495)
T 3b4w_A 154 VAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFTFTGS 233 (495)
T ss_dssp CCSSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCBSHHHHHHHTTCTTCCEEEEESC
T ss_pred CCCcchHHHHHHHHHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCHHHHHHHHhCCCcCEEEEeCC
Confidence 9999999999999999999999999999999999999999999999 99999999999777899999996 999999999
Q ss_pred hHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHH
Q 014164 255 PRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL 334 (429)
Q Consensus 255 ~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~ 334 (429)
+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|++++|||||+++|++|+++|++++
T Consensus 234 ~~~G~~i~~~aa~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 312 (495)
T 3b4w_A 234 SAVGREVGRRAAEMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGV-MNAGQGCVNQTRILAPRSRYDEIVAAVTNFV 312 (495)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHh-hcCCCCCCCCeEEEEcccHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred hhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccCC---CCceEecEEEecCCCCCCccccCccccc
Q 014164 335 KEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRDE---KQLKIAPTILLDVPDDSTIMKEEIFGPL 409 (429)
Q Consensus 335 ~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~---~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 409 (429)
+++++|+|. +++++||++++.+++++.++++++. .|+++++||..+. .|+|++|||+.+++++|++++||+||||
T Consensus 313 ~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPV 392 (495)
T 3b4w_A 313 TALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGPV 392 (495)
T ss_dssp HHSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCCCSSE
T ss_pred HhcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhcccccce
Confidence 999999996 5899999999999999999999986 4779999997643 5899999999999999999999999999
Q ss_pred eeeEecCCHHHHHHHHHhh
Q 014164 410 LPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 410 ~~v~~~~~~~eai~l~n~~ 428 (429)
++|++|+|+||||+++|++
T Consensus 393 l~v~~~~~~deAi~~aN~~ 411 (495)
T 3b4w_A 393 LAIIPYDTEEDAIAIANDS 411 (495)
T ss_dssp EEEEEESSHHHHHHHHHCS
T ss_pred EEEEecCCHHHHHHHHhcC
Confidence 9999999999999999975
No 18
>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}
Probab=100.00 E-value=1.2e-83 Score=653.94 Aligned_cols=395 Identities=24% Similarity=0.318 Sum_probs=366.3
Q ss_pred cccccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHH
Q 014164 16 AACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQI 95 (429)
Q Consensus 16 ~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L 95 (429)
+....++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++|+++|++||+.|+.++..+|.++|
T Consensus 11 ~~~~~~~~I~G-~~~~~~~~~~~~v~nP--------~tg~~i~-~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L 80 (517)
T 3r31_A 11 AQPKASHFIDG-DYVEDNTGTPFESIFP--------ATGEMIA-KLHAATPAIVERAIASAKRAQKEWAAMSPMARGRIL 80 (517)
T ss_dssp TCCSSSEEETT-EEECCTTSCEEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred cccccCeeECC-EEecCCCCCEEEEECC--------CCCCEEE-EECCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHH
Confidence 44567899999 9999888866666666 9999998 777999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHh---hcCCCcccccccCCCCcceEEeecceE
Q 014164 96 QSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY---WTKPEKAKTSLTTYPSSAEIISEPLGV 172 (429)
Q Consensus 96 ~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~P~Gv 172 (429)
++++++|+++.++|++++++|+|||+.++ |+..+++.++|++...++ |........ ..+. .++.++|+||
T Consensus 81 ~~~a~~l~~~~~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~---~~~~-~~~~~~P~GV 153 (517)
T 3r31_A 81 KRAADIMRERNDALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPL---GGDF-AYTKRVPLGV 153 (517)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEEC---SSSE-EEEEEEECSE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCccccc---CCCc-ceEEEcCccE
Confidence 99999999999999999999999999987 999999999999998877 333332221 1234 8999999999
Q ss_pred EEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCCHHHHHHHHhcC-CCEEE
Q 014164 173 VLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKIL 250 (429)
Q Consensus 173 v~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~ 250 (429)
|++|+|||||+...++++++||++||+||+|||+.+|+++.+|++++.++ +|+|+||+|+|+.+.++.|++|+ ||.|.
T Consensus 154 V~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g~~~~g~~L~~~p~vd~I~ 233 (517)
T 3r31_A 154 CVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVS 233 (517)
T ss_dssp EEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCCCTTHHHHHHTCTTEEEEE
T ss_pred EEEECCCcchHHHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEECCHHHHHHHHhCCCcCEEe
Confidence 99999999999999999999999999999999999999999999999999 99999999999778899999997 99999
Q ss_pred EeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHH
Q 014164 251 YTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSL 330 (429)
Q Consensus 251 ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l 330 (429)
||||+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++|++|+++|
T Consensus 234 FTGS~~~G~~i~~~aa~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f-~n~GQ~C~a~~rvlV~~~i~d~f~~~l 312 (517)
T 3r31_A 234 LTGSVPTGRKVAAAAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNF-YSSGQVCSNGTRVFVQKKAKARFLENL 312 (517)
T ss_dssp EESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHT-SCCHHHHTTCEEEEEEGGGHHHHHHHH
T ss_pred ccCCHHHHHHHHHHhhcCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHh-cCCCceeccCceEEEeHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCc-cC---CCCceEecEEEecCCCCCCccccC
Q 014164 331 RNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQ-RD---EKQLKIAPTILLDVPDDSTIMKEE 404 (429)
Q Consensus 331 ~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~-~~---~~g~~~~Ptvl~~~~~~~~~~~~E 404 (429)
+++++++++|+|. +++++||++++.+++++.++|+++. .|+++++||. .+ ..|+|++|||+.+++++|++++||
T Consensus 313 ~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~eE 392 (517)
T 3r31_A 313 KRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREE 392 (517)
T ss_dssp HHHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCCCEEEEEECTTSHHHHSC
T ss_pred HHHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceECCEEEecCCCCCccccce
Confidence 9999999999996 5889999999999999999999986 4789999993 11 368999999999999999999999
Q ss_pred ccccceeeEecCCHHHHHHHHHhh
Q 014164 405 IFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 405 ~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+||||++|++|+|.||||+++|++
T Consensus 393 iFGPVl~v~~~~~~deAi~~aN~~ 416 (517)
T 3r31_A 393 IFGPVMCVLDFDDEDEVLARANAT 416 (517)
T ss_dssp CSSSEEEEEEECCHHHHHHHHHCS
T ss_pred eeccEEEEEEeCCHHHHHHHHhCC
Confidence 999999999999999999999975
No 19
>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A
Probab=100.00 E-value=3e-83 Score=648.25 Aligned_cols=394 Identities=23% Similarity=0.343 Sum_probs=364.5
Q ss_pred cceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHH
Q 014164 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIA 99 (429)
Q Consensus 20 ~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a 99 (429)
.++|||| +|+.+.+ .+++++|| +||++++ .++.++.+|+++|+++|++||+.|+.+++.+|.++|++++
T Consensus 24 ~~~~i~G-~~~~~~~-~~~~v~nP--------~tg~~i~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a 92 (495)
T 1wnd_A 24 HKLLING-ELVSGEG-EKQPVYNP--------ATGDVLL-EIAEASAEQVDAAVRAADAAFAEWGQTTPKVRAECLLKLA 92 (495)
T ss_dssp CCEEETT-EEECCCS-CEEEEEET--------TTTEEEE-EEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred cCeEECC-EEecCCC-CeEEEECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHH
Confidence 4689999 9998755 45555555 9999998 7779999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCC
Q 014164 100 NMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTW 179 (429)
Q Consensus 100 ~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~ 179 (429)
++|++++++|++++++|+|||..+++..|+..+++.++|+++.++++.+... +.. ..+...++.++|+|||++|+||
T Consensus 93 ~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~-~~~--~~~~~~~~~~~P~GVV~~I~Pw 169 (495)
T 1wnd_A 93 DVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAA-GEY--LEGHTSMIRRDPLGVVASIAPW 169 (495)
T ss_dssp HHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECB-EEE--ETTEEEEEEEEECSEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-cCC--CCCceeEEeeecCCeEEEECCC
Confidence 9999999999999999999999999634999999999999999888754332 111 1233568899999999999999
Q ss_pred chhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhhcCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHH
Q 014164 180 NYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRV 257 (429)
Q Consensus 180 n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~alP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~ 257 (429)
|||+...++++++||++||+||+|||+.+|+++.++++++.+++|+|++|+|+| +.+.+..|++|+ +|.|.||||+.+
T Consensus 170 N~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ealP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTGS~~~ 249 (495)
T 1wnd_A 170 NYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIAT 249 (495)
T ss_dssp SSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTTSCTTSEEECCCCTTTTHHHHHTCTTEEEEEEESCHHH
T ss_pred cchHHHHHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHhCCcCeEEEEeCCCHHHHHHHHhCCCcCEEEEECcHHH
Confidence 999999999999999999999999999999999999999999999999999999 667899999997 999999999999
Q ss_pred HHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhh
Q 014164 258 GRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEF 337 (429)
Q Consensus 258 ~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~ 337 (429)
|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|+++++||||++++++|+++|+++++++
T Consensus 250 G~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~ 328 (495)
T 1wnd_A 250 GEHIISHTASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGY-YNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATL 328 (495)
T ss_dssp HHHHHHHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTT-GGGGCSTTCCCEEEEETTTHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHH-hcCCCCCCCCcEEEecchhHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred hCCCCC-CCCcccccCCHHHHHHHHhHHHhhhc-C-CEEEeCCc-cCCCCceEecEEEecCCCCCCccccCccccceeeE
Q 014164 338 FGKNPM-ESKDLSRIVNPFHFARLASLLDEDKV-S-DKIVYGGQ-RDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIV 413 (429)
Q Consensus 338 ~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~-~-~~vl~gg~-~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~ 413 (429)
++|+|. +++++||++++.+++++.++|+++.. | +++++||. .+..|+|++|||+.+++++|++++||+||||++|+
T Consensus 329 ~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~ 408 (495)
T 1wnd_A 329 KSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVT 408 (495)
T ss_dssp CBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCCCSSEEEEE
T ss_pred cCCCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccCCCCCeeCCEEEeCCCCCChhhhccccCceEEEE
Confidence 999996 58999999999999999999999864 6 79999997 54469999999999999999999999999999999
Q ss_pred ecCCHHHHHHHHHhh
Q 014164 414 TVSIVSSAHFKLKAC 428 (429)
Q Consensus 414 ~~~~~~eai~l~n~~ 428 (429)
+|+|++|||+++|++
T Consensus 409 ~~~~~deAi~~aN~~ 423 (495)
T 1wnd_A 409 PFDNEEQVVNWANDS 423 (495)
T ss_dssp EECCHHHHHHHHHSS
T ss_pred EeCCHHHHHHHHhcC
Confidence 999999999999975
No 20
>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*
Probab=100.00 E-value=4.5e-83 Score=648.49 Aligned_cols=394 Identities=24% Similarity=0.370 Sum_probs=365.2
Q ss_pred cccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHH
Q 014164 18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQS 97 (429)
Q Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~ 97 (429)
...++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++|+++|++||+.|+.++..+|.++|++
T Consensus 10 ~~~~~~I~G-~~~~~~~~~~~~v~nP--------~tg~~i~-~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~ 79 (505)
T 3prl_A 10 FNANILRNG-EWVESRTGERISISAP--------ASGVALG-SIPALSQEEVNDAIQGAKDAQKIWKIRPIHERVDLLYA 79 (505)
T ss_dssp EECCEEETT-EEECCTTCCEEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred cccCeeECC-EEecCCCCCEEEEECC--------CCCCEEE-EEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Confidence 345899999 9999988766666666 9999998 77799999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCC---CCcceEEeecceEEE
Q 014164 98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTY---PSSAEIISEPLGVVL 174 (429)
Q Consensus 98 ~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~P~Gvv~ 174 (429)
++++|+++.++|++++++|+|||..+++ .|+..+++.++|+++..+++.+....... ... +...++.++|+|||+
T Consensus 80 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~P~GVV~ 157 (505)
T 3prl_A 80 WADLLEERKEIIGELIMHEVAKPKKSAI-GEVSRTADIIRHTADEALRLNGETLKGDQ-FKGGSSKKIALVEREPLGVVL 157 (505)
T ss_dssp HHHHHHHTHHHHHHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHHTCCEEEEEGGG-STTTCSSEEEEEEEEECSEEE
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccccccc-cccccCCceeEEEEcCCcEEE
Confidence 9999999999999999999999999997 69999999999999999887654321110 011 345688999999999
Q ss_pred EEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEE
Q 014164 175 VISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILY 251 (429)
Q Consensus 175 ~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~f 251 (429)
+|+|||||+...++++++||++||+||+|||+.+|+++.+|++++.++ +|+|++|+|+| +.+.++.|++|+ +|.|.|
T Consensus 158 ~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~F 237 (505)
T 3prl_A 158 AISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHPGIDMITF 237 (505)
T ss_dssp EEECSSSTTHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCTTCCEEEE
T ss_pred EECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCCCCCEEEE
Confidence 999999999999999999999999999999999999999999999999 99999999999 467889999997 999999
Q ss_pred eCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHH
Q 014164 252 TGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLR 331 (429)
Q Consensus 252 tGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~ 331 (429)
|||+.+|+.|.+.++ ++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||+++|++|+++|+
T Consensus 238 TGS~~~G~~i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~ 314 (505)
T 3prl_A 238 TGGTTTGERISEKAK--MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAF-SYSGQRCTAIKRVFVQDSVADQLVANIK 314 (505)
T ss_dssp ESCHHHHHHHHHHCC--SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCCSSSEEEEEEEHHHHHHHHHHHH
T ss_pred eCCHHHHHHHHHHcc--CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHH-hcCCCccccCceEEEeHHHHHHHHHHHH
Confidence 999999999999887 8999999999999999999999999999999999 9999999999999999999999999999
Q ss_pred HHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccce
Q 014164 332 NELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLL 410 (429)
Q Consensus 332 ~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~ 410 (429)
++++++++|+|.+++++||++++.+++++.++|+++. .|+++++||.. .|+|++|||+.+++++|++++||+||||+
T Consensus 315 ~~~~~~~~g~p~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~--~g~~~~PTvl~~v~~~~~i~~eEiFGPVl 392 (505)
T 3prl_A 315 ELVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR--QGNLLSPTLLDDVTPAMRVAWEEPFGPVL 392 (505)
T ss_dssp HHHHHCCBSCTTTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE--ETTEECCEEEESCCTTSGGGTSCCCSSEE
T ss_pred HHHHhcccCCCCCcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC--CCceeCCeEeecCCCCChhhcCCccCcEE
Confidence 9999999999987889999999999999999999986 47799999974 68999999999999999999999999999
Q ss_pred eeEecCCHHHHHHHHHhh
Q 014164 411 PIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 411 ~v~~~~~~~eai~l~n~~ 428 (429)
+|++|+|+||||+++|++
T Consensus 393 ~V~~~~~~deAi~~aN~~ 410 (505)
T 3prl_A 393 PIIRVKDANEAISLSNQS 410 (505)
T ss_dssp EEEEESSHHHHHHHHHTS
T ss_pred EEEEeCCHHHHHHHHhCC
Confidence 999999999999999975
No 21
>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}
Probab=100.00 E-value=4.7e-83 Score=650.44 Aligned_cols=396 Identities=22% Similarity=0.323 Sum_probs=365.9
Q ss_pred ccccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHH
Q 014164 17 ACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQ 96 (429)
Q Consensus 17 ~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~ 96 (429)
....++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++|+++|++||+.|+.+++.+|.++|+
T Consensus 24 ~~~~~~~i~G-~~~~~~~~~~~~~~nP--------~tg~~i~-~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L~ 93 (515)
T 2d4e_A 24 ERPALHFIAG-EFVPSESGETFPSLDP--------ATNEVLG-VAARGGEREVDRAAKAAHEAFQRWSRTKAKERKRYLL 93 (515)
T ss_dssp HSCBCEEETT-EEECCTTCCEEEEEET--------TTTEEEE-EEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred ccccCeeECC-EEecCCCCCeEEEECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHH
Confidence 3345799999 9999877755555555 9999998 6779999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEE
Q 014164 97 SIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVI 176 (429)
Q Consensus 97 ~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i 176 (429)
+++++|+++.++|++++++|+|||+.+++ .|+..+++.++|+++.++++.+... +.. ..+...++.++|+|||++|
T Consensus 94 ~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~g~~~-~~~--~~~~~~~~~~~P~GVv~~I 169 (515)
T 2d4e_A 94 RIAELIEKHADELAVMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDRT-FPV--DRDWLYYTVRVPAGPVGII 169 (515)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTGGGTTCEEE-CCB--TTTEEEEEEEEECCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccc-ccC--CCCceeEEEEecCCceEEE
Confidence 99999999999999999999999999997 7999999999999999888765322 111 1244568899999999999
Q ss_pred cCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeC
Q 014164 177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTG 253 (429)
Q Consensus 177 ~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftG 253 (429)
+|||||+...++++++||++||+||+|||+.+|+++..+++++.++ +|+|+||+|+| +.+.++.|++|+ +|.|.|||
T Consensus 170 ~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~FTG 249 (515)
T 2d4e_A 170 TPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLLTLTG 249 (515)
T ss_dssp CCSSSHHHHHHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEEEEES
T ss_pred CCCCchhhhhhhhhhHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEEEeC
Confidence 9999999999999999999999999999999999999999999999 99999999999 457899999996 99999999
Q ss_pred ChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHH
Q 014164 254 SPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNE 333 (429)
Q Consensus 254 s~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~ 333 (429)
|+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|+++++||||+++|++|+++|+++
T Consensus 250 S~~~G~~I~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~ 328 (515)
T 2d4e_A 250 ETETGKIVMRNAADHLKRLSPELGGKSPALVFADADLERALDAVVFQIF-SFNGERCTASSRLLVEEKIFEDFVGKVVER 328 (515)
T ss_dssp CHHHHHHHHHHHGGGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCCCEEEEEHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHhhcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHH-hcCCCCCCCCeEEEEehhHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccCC---------CCceEecEEEecCCCCCCccc
Q 014164 334 LKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRDE---------KQLKIAPTILLDVPDDSTIMK 402 (429)
Q Consensus 334 ~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~---------~g~~~~Ptvl~~~~~~~~~~~ 402 (429)
++++++|+|. +++++||++++.+++++.++|+++. .|+++++||..+. .|+|++|||+.+ +++|.+++
T Consensus 329 ~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~~i~~ 407 (515)
T 2d4e_A 329 ARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKIAQ 407 (515)
T ss_dssp HHHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTSHHHH
T ss_pred HhhcccCCcccccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCChhhh
Confidence 9999999996 5799999999999999999999885 5789999997643 689999999999 99999999
Q ss_pred cCccccceeeEecCCHHHHHHHHHhh
Q 014164 403 EEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 403 ~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
||+||||++|++|+|++|||+++|++
T Consensus 408 eEiFGPVl~v~~~~~~deAi~~aN~~ 433 (515)
T 2d4e_A 408 EEIFGPVLVAIPFKDEEEALRKANDT 433 (515)
T ss_dssp SCCCSSEEEEEEESSHHHHHHHHHCS
T ss_pred ccccCCceEEEeeCCHHHHHHHHhcC
Confidence 99999999999999999999999975
No 22
>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*
Probab=100.00 E-value=7.1e-83 Score=649.84 Aligned_cols=401 Identities=19% Similarity=0.297 Sum_probs=367.1
Q ss_pred hhcccccccceeeecceeeccCCccccccccCCceEeeeCC-cchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHH
Q 014164 12 FSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSA-TMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEW 90 (429)
Q Consensus 12 ~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~-tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~ 90 (429)
+...+....++|||| +|+.+ +.+ +.+.||+ ||++++ .++.++.+|+++|+++|++||+.|+.+++.+
T Consensus 30 ~~~~~~~~~~~~i~G-~~~~~--~~~--------~~~~nP~~t~~~i~-~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~ 97 (516)
T 1uzb_A 30 VREEFGRHYPLYIGG-EWVDT--KER--------MVSLNPSAPSEVVG-TTAKAGKAEAEAALEAAWKAFKTWKDWPQED 97 (516)
T ss_dssp HHHTTTEEECEEETT-EEECC--SSE--------EEEEETTEEEEEEE-EEECCCHHHHHHHHHHHHHHHHHHTTSCHHH
T ss_pred hhhhhccccceeECC-EEecC--CCe--------EEEECCCCCCcEEE-EEeCCCHHHHHHHHHHHHHHHHHhccCCHHH
Confidence 333344456899999 99964 434 4455558 699888 6779999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecc
Q 014164 91 RMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPL 170 (429)
Q Consensus 91 R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 170 (429)
|.++|++++++|++++++|++++++|+|||+.+++ .|+..+++.++|+++.++++.+...... ...+...++.++|+
T Consensus 98 R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~--~~~~~~~~~~~~P~ 174 (516)
T 1uzb_A 98 RSRLLLKAAALMRRRKRELEATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVV--PYPGEDNESFYVPL 174 (516)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHGGGCSSCCCCC--CCTTEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccccc--CCCCceEEEEEecc
Confidence 99999999999999999999999999999999997 7999999999999999999876542111 11234568899999
Q ss_pred eEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CC
Q 014164 171 GVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WD 247 (429)
Q Consensus 171 Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~ 247 (429)
|||++|+|||||+...++++++||++||+||+|||+.+|+++.+|++++.++ +|+|++|+|+| +.+.+..|++|+ +|
T Consensus 175 GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~ 254 (516)
T 1uzb_A 175 GAGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIR 254 (516)
T ss_dssp CEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCC
T ss_pred ceEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcC
Confidence 9999999999999999999999999999999999999999999999999999 99999999999 667899999997 99
Q ss_pred EEEEeCChHHHHHHHHHHh------cccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCC
Q 014164 248 KILYTGSPRVGRIVMAAAA------KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD 321 (429)
Q Consensus 248 ~v~ftGs~~~~~~i~~~~~------~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~ 321 (429)
.|.||||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|+++++||||++
T Consensus 255 ~I~FTGS~~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~ 333 (516)
T 1uzb_A 255 FINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAY-GFQGQKCSAASRLILTQG 333 (516)
T ss_dssp EEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEHH
T ss_pred EEEecCCHHHHHHHHHHhhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHH-hCCCCccccCcEEEEchH
Confidence 9999999999999999998 789999999999999999999999999999999999 999999999999999999
Q ss_pred chHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhhcCCEEEeCCcc-CCCCceEecEEEecCCCCCCc
Q 014164 322 FAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQR-DEKQLKIAPTILLDVPDDSTI 400 (429)
Q Consensus 322 ~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg~~-~~~g~~~~Ptvl~~~~~~~~~ 400 (429)
+|++|+++|+++++++++|+|++++++||++++.+++++.++|+++...+++++||.. +..|+|++|||+.+++++|++
T Consensus 334 i~d~f~~~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~~G~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i 413 (516)
T 1uzb_A 334 AYEPVLERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFTEVPPKARI 413 (516)
T ss_dssp HHHHHHHHHHHHHTTCCBSCGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEEECCSBCSSSSCCBCCEEEESCCTTSGG
T ss_pred HHHHHHHHHHHHHHhccCCCCccccccCCCCCHHHHHHHHHHHHHHHHCCCEEECCccCCCCCcEECCEEEECCCCCCHh
Confidence 9999999999999999999996689999999999999999999998765689999976 346899999999999999999
Q ss_pred cccCccccceeeEecCCHHHHHHHHHhh
Q 014164 401 MKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 401 ~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
++||+||||++|++|+|++|||+++|++
T Consensus 414 ~~eEiFGPVl~v~~~~~~~eAi~~aN~~ 441 (516)
T 1uzb_A 414 AQEEIFGPVLSVIRVKDFAEALEVANDT 441 (516)
T ss_dssp GTSCCCSSEEEEEEESSHHHHHHHHHCS
T ss_pred hhccccCceEEEEEeCCHHHHHHHHhcC
Confidence 9999999999999999999999999975
No 23
>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*
Probab=100.00 E-value=7.5e-83 Score=645.13 Aligned_cols=397 Identities=23% Similarity=0.344 Sum_probs=367.2
Q ss_pred ccccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHH
Q 014164 17 ACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQ 96 (429)
Q Consensus 17 ~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~ 96 (429)
+...++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++|+++|++||+.|+.+++.+|.++|+
T Consensus 4 ~~~~~~~i~g-~~~~~~~~~~~~v~~P--------~tg~~~~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~ 73 (479)
T 2imp_A 4 PVQHPMYIDG-QFVTWRGDAWIDVVNP--------ATEAVIS-RIPDGQAEDARKAIDAAERAQPEWEALPAIERASWLR 73 (479)
T ss_dssp CEECCEEETT-EEECCCCSCEEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred CcccceeECC-EEecCCCCCeEEEECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 4556799999 9999877755555555 9999998 6779999999999999999999999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEE
Q 014164 97 SIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVI 176 (429)
Q Consensus 97 ~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i 176 (429)
+++++|++++++|++++++|+|||+.+++ .|+..+++.++|+++.++++.+.... . ...+...++.++|+|||++|
T Consensus 74 ~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~l~~~a~~~~~~~~~~~~-~--~~~~~~~~~~~~P~GVv~~I 149 (479)
T 2imp_A 74 KISAGIRERASEISALIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEIIQ-S--DRPGENILLFKRALGVTTGI 149 (479)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHTTTTTCCCEEEC-C--SSTTEEEEEEEEECSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhhCCccc-c--CCCCceeEEEEeccceEEEE
Confidence 99999999999999999999999999996 79999999999999988877654421 1 11234568999999999999
Q ss_pred cCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCC-HHHHHHHHhcC-CCEEEEeC
Q 014164 177 STWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGA-VAETSALLEQK-WDKILYTG 253 (429)
Q Consensus 177 ~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~-~~~~~~L~~~~-v~~v~ftG 253 (429)
+|||||+...++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+|+|+ .+.++.|++|+ +|.|.|||
T Consensus 150 ~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~fTG 229 (479)
T 2imp_A 150 LPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMVSMTG 229 (479)
T ss_dssp CCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEEEEES
T ss_pred CCCchHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEEEEeC
Confidence 9999999999999999999999999999999999999999999999 999999999994 46789999996 99999999
Q ss_pred ChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHH
Q 014164 254 SPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNE 333 (429)
Q Consensus 254 s~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~ 333 (429)
|+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|+++++||||+++|++|+++|+++
T Consensus 230 S~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~ 308 (479)
T 2imp_A 230 SVSAGEKIMATAAKNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRV-INSGQVCNCAERVYVQKGIYDQFVNRLGEA 308 (479)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSS-TTTTCCSSSCSEEEEEGGGHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHh-hcCCCcCcCCcEEEEehhhHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HhhhhCCCCC--CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCcc-CCCCceEecEEEecCCCCCCccccCccccc
Q 014164 334 LKEFFGKNPM--ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPL 409 (429)
Q Consensus 334 ~~~~~~g~~~--~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 409 (429)
++++++|+|. +++++||++++.+++++.++++++. .|+++++||.. +..|+|++|||+.+++++|++++||+||||
T Consensus 309 ~~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPV 388 (479)
T 2imp_A 309 MQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPV 388 (479)
T ss_dssp HHTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCCCSSE
T ss_pred HHhcccCCccccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCccCCce
Confidence 9999999996 4899999999999999999999986 47799999975 336899999999999999999999999999
Q ss_pred eeeEecCCHHHHHHHHHhh
Q 014164 410 LPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 410 ~~v~~~~~~~eai~l~n~~ 428 (429)
++|++|+|++|||+++|++
T Consensus 389 l~v~~~~~~~eAi~~aN~~ 407 (479)
T 2imp_A 389 LPVVAFDTLEDAISMANDS 407 (479)
T ss_dssp EEEEEESSHHHHHHHHHCS
T ss_pred EEEEeeCCHHHHHHHHhcC
Confidence 9999999999999999975
No 24
>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}
Probab=100.00 E-value=1.6e-82 Score=642.97 Aligned_cols=395 Identities=22% Similarity=0.332 Sum_probs=366.9
Q ss_pred ccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHH
Q 014164 19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI 98 (429)
Q Consensus 19 ~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~ 98 (429)
..++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++|+++|++||+.|+.++..+|.++|+++
T Consensus 9 ~~~~~i~g-~~~~~~~~~~~~~~~P--------~t~~~i~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~ 78 (481)
T 3jz4_A 9 RQQALING-EWLDANNGEAIDVTNP--------ANGDKLG-SVPKMGADETRAAIDAANRALPAWRALTAKERATILRNW 78 (481)
T ss_dssp CCSEEETT-EEECCTTCCEEEEECT--------TTCCEEE-EEECBCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred ccceeECC-EEecCCCCCeEEeECC--------CCCCEEE-EEcCCCHHHHHHHHHHHHHHHHhcccCCHHHHHHHHHHH
Confidence 45799999 9999988866666666 9999988 677999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcC
Q 014164 99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIST 178 (429)
Q Consensus 99 a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p 178 (429)
++.|+++.++|++++++|+|||..+++ .|+..+++.++|++....+..+.... ....+...++.++|+|||++|+|
T Consensus 79 a~~l~~~~~~la~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~~~---~~~~~~~~~~~~~P~GVv~~I~P 154 (481)
T 3jz4_A 79 FNLMMEHQDDLARLMTLEQGKPLAEAK-GEISYAASFIEWFAEEGKRIYGDTIP---GHQADKRLIVIKQPIGVTAAITP 154 (481)
T ss_dssp HHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCEEEEC---CSSTTEEEEEEEEECCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccc---ccCCCceEEEEEcCccEEEEECC
Confidence 999999999999999999999999996 69999999999999987764432211 11234567899999999999999
Q ss_pred CchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCCh
Q 014164 179 WNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSP 255 (429)
Q Consensus 179 ~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~ 255 (429)
||||+...++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+++| +.+.++.|++|+ +|.|.||||+
T Consensus 155 wN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~fTGS~ 234 (481)
T 3jz4_A 155 WNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGST 234 (481)
T ss_dssp SSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEEEEESCH
T ss_pred CcchHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEEEEECCH
Confidence 99999999999999999999999999999999999999999999 99999999999 577899999997 9999999999
Q ss_pred HHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHh
Q 014164 256 RVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELK 335 (429)
Q Consensus 256 ~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~ 335 (429)
.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|+++++||||+++|++|+++|+++++
T Consensus 235 ~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~ 313 (481)
T 3jz4_A 235 EIGRQLMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKF-RNAGQTCVCANRLYVQDGVYDRFAEKLQQAMS 313 (481)
T ss_dssp HHHHHHHHHHTTTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEEGGGHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHH-HhCCCcccCCcEEEEeHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999 99999999999999999999999999999999
Q ss_pred hhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCcc-CCCCceEecEEEecCCCCCCccccCccccceee
Q 014164 336 EFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPI 412 (429)
Q Consensus 336 ~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v 412 (429)
++++|+|. +++++||++++.+++++.++|+++. .|+++++||.. +..|+|++|||+.+++++|.+++||+||||++|
T Consensus 314 ~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v 393 (481)
T 3jz4_A 314 KLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLAPL 393 (481)
T ss_dssp TCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCCSSEEEE
T ss_pred hccCCCCccCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCcccccccccCceEEE
Confidence 99999996 5889999999999999999999986 57899999976 446899999999999999999999999999999
Q ss_pred EecCCHHHHHHHHHhh
Q 014164 413 VTVSIVSSAHFKLKAC 428 (429)
Q Consensus 413 ~~~~~~~eai~l~n~~ 428 (429)
++|+|+||||+++|++
T Consensus 394 ~~~~~~deAi~~aN~~ 409 (481)
T 3jz4_A 394 FRFKDEADVIAQANDT 409 (481)
T ss_dssp EEECCHHHHHHHHHCS
T ss_pred EEECCHHHHHHHHhcC
Confidence 9999999999999975
No 25
>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*
Probab=100.00 E-value=1.2e-81 Score=638.51 Aligned_cols=402 Identities=16% Similarity=0.226 Sum_probs=365.6
Q ss_pred hhhhhhcccccccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCC
Q 014164 8 AFQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKS 87 (429)
Q Consensus 8 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~ 87 (429)
.|+++. ..+++++|||| +|+. ++.++ .+.||+||++++ .++.++.+|+++|+++|++||+.|+.++
T Consensus 14 ~~~~~~--~~~~~~~~i~g-~~~~--~~~~~--------~v~nP~tg~~i~-~~~~~~~~~v~~av~~A~~A~~~w~~~~ 79 (500)
T 2j6l_A 14 WLKELG--LREENEGVYNG-SWGG--RGEVI--------TTYCPANNEPIA-RVRQASVADYEETVKKAREAWKIWADIP 79 (500)
T ss_dssp GGGGGT--CCSEEECEESS-SEEC--CSCEE--------EEEETTTTEEEE-EEECCCHHHHHHHHHHHHHHHHHHTTSC
T ss_pred HHHhcC--CCCCCCceECC-EEec--CCCeE--------EEECCCCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHhccCC
Confidence 344443 67889999999 9994 45444 455559999998 7779999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEe
Q 014164 88 YEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIIS 167 (429)
Q Consensus 88 ~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (429)
+.+|.++|++++++|++++++|++++++|+|||..++. +|+..+++.++|+++.++++.+.... ....+...++.+
T Consensus 80 ~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~~---~~~~~~~~~~~~ 155 (500)
T 2j6l_A 80 APKRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGV-GEVQEYVDICDYAVGLSRMIGGPILP---SERSGHALIEQW 155 (500)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHTTTCCCBEEC---CSSTTEEEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCcccc---ccCCCceeEEEE
Confidence 99999999999999999999999999999999999995 79999999999999988776543211 111233457889
Q ss_pred ecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhh----h-cCCCceEEecCCHHHHHHHH
Q 014164 168 EPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLED----Y-VDNSAVRVVEGAVAETSALL 242 (429)
Q Consensus 168 ~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~----a-lP~~~v~~v~~~~~~~~~L~ 242 (429)
+|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++++++.+ + +|+|++|+|+|+.+.++.|+
T Consensus 156 ~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~g~~L~ 235 (500)
T 2j6l_A 156 NPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMA 235 (500)
T ss_dssp EECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECCSHHHHHHHH
T ss_pred ecccEEEEECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeCCHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999888765 4 99999999999777899999
Q ss_pred hcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCC
Q 014164 243 EQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKD 321 (429)
Q Consensus 243 ~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~ 321 (429)
+|+ +|.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|+++++||||++
T Consensus 236 ~~~~vd~I~FTGS~~~g~~i~~~aa~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~ 314 (500)
T 2j6l_A 236 KDERVNLLSFTGSTQVGKQVGLMVQERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAV-GTAGQRCTTARRLFIHES 314 (500)
T ss_dssp HCTTCSEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEETT
T ss_pred cCCCcCEEEEECCHHHHHHHHHHhccCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHH-hcCCCCcCCCcEEEEcHH
Confidence 996 999999999999999999999999999999999999999999999999999999999 999999999999999999
Q ss_pred chHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCcc-CCCCceEecEEEecCCCCC
Q 014164 322 FAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQR-DEKQLKIAPTILLDVPDDS 398 (429)
Q Consensus 322 ~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~-~~~g~~~~Ptvl~~~~~~~ 398 (429)
+|++|+++|++++++++.|+|. +++++||++++.+++++.++++++. .|+++++||.. +..|+|++|||+.+++++|
T Consensus 315 i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~ 394 (500)
T 2j6l_A 315 IHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDA 394 (500)
T ss_dssp THHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTC
T ss_pred HHHHHHHHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcC
Confidence 9999999999999999999996 5889999999999999999999986 47899999976 3468999999999999999
Q ss_pred CccccCccccceeeEecCCHHHHHHHHHhh
Q 014164 399 TIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 399 ~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
.+++||+||||++|++|+|++|||+++|++
T Consensus 395 ~i~~eEiFGPVl~v~~~~~~deAi~~aN~~ 424 (500)
T 2j6l_A 395 SIAHTETFAPILYVFKFQNEEEVFAWNNEV 424 (500)
T ss_dssp HHHHSCCSSSEEEEEEECCHHHHHHHHHTS
T ss_pred hhhcCcccCceEEEEeeCCHHHHHHHHhCC
Confidence 999999999999999999999999999985
No 26
>2ve5_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wme_A* 2wox_A* 3zqa_A* 2xdr_A*
Probab=100.00 E-value=4.7e-82 Score=641.46 Aligned_cols=396 Identities=24% Similarity=0.348 Sum_probs=368.3
Q ss_pred cccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHH
Q 014164 18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQS 97 (429)
Q Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~ 97 (429)
...++|||| +|+.+.++.+++++|| +||+.++ .++.++.+|+++++++|++||+.|+.++..+|.++|++
T Consensus 5 ~~~~~~I~G-~~~~~~~~~~~~~~~P--------~tg~~~~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~ 74 (490)
T 2ve5_A 5 EEQKLYIGG-RYVEASSGATFETINP--------ANGEVLA-KVQRASREDVERAVQSAVEGQKVWAAMTAMQRSRILRR 74 (490)
T ss_dssp CCBCEECSS-SEECCSSSCEEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred ccCCeeECC-EEecCCCCCeEEeECC--------CCCCEEE-EEcCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHH
Confidence 356899999 9999888866666666 9999988 67799999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEc
Q 014164 98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIS 177 (429)
Q Consensus 98 ~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 177 (429)
+++.|+++.++|++++++|+|||..+++..|+..+++.++|+++.++++.+... +. ..+...++.++|+|||++|+
T Consensus 75 ~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~-~~---~~~~~~~~~~~P~GVv~~I~ 150 (490)
T 2ve5_A 75 AVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQI-PL---RETSFVYTRREPLGVVAGIG 150 (490)
T ss_dssp HHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEE-EE---ETTEEEEEEEEECSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccc-cC---CCCceeeEeeccccEEEEEC
Confidence 999999999999999999999999999745999999999999999887543322 11 23456789999999999999
Q ss_pred CCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCC
Q 014164 178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGS 254 (429)
Q Consensus 178 p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs 254 (429)
|||||+...++++++||++||+||+|||+.+|+++.+|++++.++ +|+|+||+++| +.+.++.|+.|+ +|.|.||||
T Consensus 151 pwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~p~vd~v~fTGS 230 (490)
T 2ve5_A 151 AWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGG 230 (490)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEEEESC
T ss_pred CCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHHhCCCcCEEEEeCC
Confidence 999999999999999999999999999999999999999999999 99999999999 678899999997 999999999
Q ss_pred hHHHHHHHHHH-hcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHH
Q 014164 255 PRVGRIVMAAA-AKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNE 333 (429)
Q Consensus 255 ~~~~~~i~~~~-~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~ 333 (429)
+.+|+.|.+.+ +++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|+++++||||+++|++|+++|+++
T Consensus 231 ~~~g~~i~~~a~a~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~ 309 (490)
T 2ve5_A 231 TSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANF-FSSGQVCTNGTRVFIHRSQQARFEAKVLER 309 (490)
T ss_dssp HHHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCCCEEEEEGGGHHHHHHHHHHH
T ss_pred cHHHHHHHHhchhccccceEEEcCCCceeEECCCCCHHHHHHHHHHHHH-hcCCCCccCCCeEEEcHHHHHHHHHHHHHH
Confidence 99999999999 8999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccC-----CCCceEecEEEecCCCCCCccccCcc
Q 014164 334 LKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRD-----EKQLKIAPTILLDVPDDSTIMKEEIF 406 (429)
Q Consensus 334 ~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~-----~~g~~~~Ptvl~~~~~~~~~~~~E~f 406 (429)
++++++|+|. +++++||++++.+++++.++++++. .|+++++||... ..|+|++|||+.+++++|++++||+|
T Consensus 310 ~~~~~~g~p~d~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiF 389 (490)
T 2ve5_A 310 VQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVREEIF 389 (490)
T ss_dssp HHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHSCCC
T ss_pred HHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceEccEEEecCCCCCccccceee
Confidence 9999999996 5889999999999999999999986 578999999762 35899999999999999999999999
Q ss_pred ccceeeEecCCHHHHHHHHHhh
Q 014164 407 GPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 407 gPv~~v~~~~~~~eai~l~n~~ 428 (429)
|||++|++|+|.+|||+++|++
T Consensus 390 GPvl~v~~~~~~deAi~~aN~~ 411 (490)
T 2ve5_A 390 GPVMSILVYDDEDEAIRRANDT 411 (490)
T ss_dssp SSEEEEEEESCHHHHHHHHHCS
T ss_pred CCeEEEEEeCCHHHHHHHHhCC
Confidence 9999999999999999999975
No 27
>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*
Probab=100.00 E-value=2.9e-82 Score=641.05 Aligned_cols=399 Identities=23% Similarity=0.343 Sum_probs=366.6
Q ss_pred hhcccccccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHH
Q 014164 12 FSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWR 91 (429)
Q Consensus 12 ~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R 91 (429)
+++.+.. .++|||| +|+.+. .+++++|| +||++++ .++.++.+|+++|+++|++||+.|+.+++.+|
T Consensus 6 ~~~~~~~-~~~~i~g-~~~~~~--~~~~~~~P--------~tg~~~~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R 72 (487)
T 2w8n_A 6 LSAALLR-TDSFVGG-RWLPAA--ATFPVQDP--------ASGAALG-MVADCGVREARAAVRAAYEAFCRWREVSAKER 72 (487)
T ss_dssp --CCCCC-CSEEETT-EEECCS--CEEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHHHHHHTTSCHHHH
T ss_pred cCccccc-cCeeECC-EEecCC--CeEEEECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHhccCCHHHH
Confidence 4556666 6899999 999874 45555555 8999998 77799999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecce
Q 014164 92 MSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLG 171 (429)
Q Consensus 92 ~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~G 171 (429)
.++|+++++.|++++++|++++++|+|||..+++ .|+..+++.++|+++.++++.+... .. ...+...++.++|+|
T Consensus 73 ~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~g~~~-~~--~~~~~~~~~~~~P~G 148 (487)
T 2w8n_A 73 SSLLRKWYNLMIQNKDDLARIITAESGKPLKEAH-GEILYSAFFLEWFSEEARRVYGDII-HT--PAKDRRALVLKQPIG 148 (487)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCCCEEE-CC--SCTTCEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccc-cc--CCCCceeEEEEecce
Confidence 9999999999999999999999999999999997 5999999999999999887544321 11 123456789999999
Q ss_pred EEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEec---C-CHHHHHHHHhcC-
Q 014164 172 VVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVE---G-AVAETSALLEQK- 245 (429)
Q Consensus 172 vv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~---~-~~~~~~~L~~~~- 245 (429)
||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++ +|+|+||+|+ | +.+.++.|++|+
T Consensus 149 Vv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~ 228 (487)
T 2w8n_A 149 VAAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPL 228 (487)
T ss_dssp EEEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTT
T ss_pred EEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCC
Confidence 999999999999999999999999999999999999999999999999999 9999999999 7 566889999997
Q ss_pred CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHH
Q 014164 246 WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPK 325 (429)
Q Consensus 246 v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~ 325 (429)
+|.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|+++++||||+++|++
T Consensus 229 v~~V~fTGS~~~g~~i~~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~ 307 (487)
T 2w8n_A 229 VSKISFTGSTTTGKILLHHAANSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKF-RNTGQTCVCSNQFLVQRGIHDA 307 (487)
T ss_dssp EEEEEEEECHHHHHHHHHHHHTTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHT-CCCSCCCSEEEEEEEEHHHHHH
T ss_pred cCEEEEeCCHHHHHHHHHHHhccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHH-hCCCCccccCCEEEEcccHHHH
Confidence 999999999999999999999999999999999999999999999999999999999 9999999999999999999999
Q ss_pred HHHHHHHHHhh-hhCCCCC-CCCcccccCCHHHHHHHHhHHHhhhc-CCEEEeCCccCCCCc-eEecEEEecCCCCCCcc
Q 014164 326 LIDSLRNELKE-FFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDEKQL-KIAPTILLDVPDDSTIM 401 (429)
Q Consensus 326 f~~~l~~~~~~-~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~-~~~vl~gg~~~~~g~-~~~Ptvl~~~~~~~~~~ 401 (429)
|+++|++++++ +++|+|. +++++||++++.+++++.++|+++.. |+++++||..+..|+ |++|||+.+++++|+++
T Consensus 308 f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~~~g~~~~~Ptvl~~v~~~~~i~ 387 (487)
T 2w8n_A 308 FVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCT 387 (487)
T ss_dssp HHHHHHHHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBCTTCTTCBCCEEEEEECGGGGTT
T ss_pred HHHHHHHHHHhhcccCCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCceECCEEEecCCCcchhh
Confidence 99999999999 9999996 58999999999999999999999864 779999998755689 99999999999999999
Q ss_pred ccCccccceeeEecCCHHHHHHHHHhh
Q 014164 402 KEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 402 ~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+||+||||++|++|+|++|||+++|++
T Consensus 388 ~eEiFGPVl~v~~~~~~~eAi~~aN~~ 414 (487)
T 2w8n_A 388 HEETFGPLAPVIKFDTEEEAIAIANAA 414 (487)
T ss_dssp CTTCCSSEEEEEEESCHHHHHHHHTCT
T ss_pred hcccccceEEEEEeCCHHHHHHHHhCC
Confidence 999999999999999999999999975
No 28
>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}
Probab=100.00 E-value=4.3e-82 Score=639.90 Aligned_cols=396 Identities=23% Similarity=0.366 Sum_probs=367.3
Q ss_pred cccccccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHH
Q 014164 14 TGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMS 93 (429)
Q Consensus 14 ~~~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~ 93 (429)
+.+....++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++++++|++||+.|+.++..+|.+
T Consensus 2 ~~m~~~~~~~i~G-~~~~~~~~~~~~~~~P--------~tg~~i~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~ 71 (478)
T 3ty7_A 2 NAMRDYTKQYING-EWVESNSNETIEVINP--------ATEEVIG-KVAKGNKADVDKAVEAADDVYLEFRHTSVKERQA 71 (478)
T ss_dssp -CCEECCEEEETT-EEEECSSSCEEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred cchhhhhhheECC-EEecCCCCCeEEeECC--------CCCCEEE-EECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHH
Confidence 3455677999999 9999988866666666 9999998 6779999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEE
Q 014164 94 QIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVV 173 (429)
Q Consensus 94 ~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv 173 (429)
+|+++++.|+++.++|++++++|+|||+.+++..|+..+++.++++++.++++.+.. .+...++.++|+|||
T Consensus 72 ~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~--------~~~~~~~~~~P~GVv 143 (478)
T 3ty7_A 72 LLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEE--------RRGDDLVVKEAIGVS 143 (478)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEE--------EETTEEEEEEECCCE
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhccc--------CCccceEEecCceEE
Confidence 999999999999999999999999999999955799999999999999998876533 124678899999999
Q ss_pred EEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEE
Q 014164 174 LVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKIL 250 (429)
Q Consensus 174 ~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ 250 (429)
++|+|||||+...++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+++| +.+.++.|+.|+ +|.|.
T Consensus 144 ~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~ 223 (478)
T 3ty7_A 144 GLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMS 223 (478)
T ss_dssp EEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEE
T ss_pred EEECCCcchHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEE
Confidence 9999999999999999999999999999999999999999999999999 99999999999 567899999997 99999
Q ss_pred EeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHH
Q 014164 251 YTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSL 330 (429)
Q Consensus 251 ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l 330 (429)
||||+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|+++++||||+++|++|+++|
T Consensus 224 fTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~~~GQ~C~a~~rvlV~~~i~d~f~~~l 302 (478)
T 3ty7_A 224 FTGSGPTGSKIMEKAAKDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVV-NNTGQVCTAGTRVLVPNKIKDAFLAEL 302 (478)
T ss_dssp ECSCHHHHCC--CSTTTTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCCCEEEEETTTHHHHHHHH
T ss_pred EECcHHHHHHHHHHHHhcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHH-HhCCCCccCCCeEEEcHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCcc-C---CCCceEecEEEecCCCCCCccccC
Q 014164 331 RNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQR-D---EKQLKIAPTILLDVPDDSTIMKEE 404 (429)
Q Consensus 331 ~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~-~---~~g~~~~Ptvl~~~~~~~~~~~~E 404 (429)
+++++++++|+|. +++++||++++.+++++.++++++. .|+++++||.. + ..|+|++|||+.+++++|++++||
T Consensus 303 ~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE 382 (478)
T 3ty7_A 303 KEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEE 382 (478)
T ss_dssp HHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSC
T ss_pred HHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCce
Confidence 9999999999996 5899999999999999999999985 58899999943 2 368999999999999999999999
Q ss_pred ccccceeeEecCCHHHHHHHHHhh
Q 014164 405 IFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 405 ~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+||||++|++|+|.+|||+++|++
T Consensus 383 ~FGPvl~v~~~~~~~eAi~~an~~ 406 (478)
T 3ty7_A 383 IFGPVMSVITYNDLDEAIQIANDT 406 (478)
T ss_dssp CCSSEEEEEEESSHHHHHHHHTCS
T ss_pred eECceeEEEecCCHHHHHHHHhCC
Confidence 999999999999999999999975
No 29
>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}
Probab=100.00 E-value=2.4e-81 Score=637.50 Aligned_cols=392 Identities=23% Similarity=0.327 Sum_probs=364.2
Q ss_pred cceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHH
Q 014164 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIA 99 (429)
Q Consensus 20 ~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a 99 (429)
.++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++|+++|++||+.|+.++..+|.++|++++
T Consensus 13 ~~~~I~G-~~~~~~~~~~~~~~~P--------~tg~~~~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a 82 (508)
T 3r64_A 13 TKHLIGG-QWVEGNSDRISTNINP--------YDDSVIA-ESKQASIADVDAAYEAAKKAQAEWAATPAAERSAIIYRAA 82 (508)
T ss_dssp TSEEETT-EEECCCSSCEEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred cceeECC-EEecCCCCCEEEeECC--------CCCCEEE-EECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHH
Confidence 3799999 9999888866666665 9999998 6779999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCC
Q 014164 100 NMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTW 179 (429)
Q Consensus 100 ~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~ 179 (429)
++|+++.++|++++++|+|||..+++ .|+..+++.+++++...+++.+ . .... ...+...++.++|+|||++|+||
T Consensus 83 ~~l~~~~~ela~~~~~e~Gk~~~~a~-~Ev~~~~~~~~~~a~~~~~~~~-~-~~~~-~~~~~~~~~~~~P~GVv~~I~Pw 158 (508)
T 3r64_A 83 ELLEEHREEIVEWLIKESGSTRSKAN-LEITLAGNITKESASFPGRVHG-R-ISPS-NTPGKENRVYRVAKGVVGVISPW 158 (508)
T ss_dssp HHHHHTHHHHHHHHHHTSCCCHHHHH-HHHHHHHHHHHHHTTSTTTCCE-E-EECC-SSTTEEEEEEEEECSEEEEECCS
T ss_pred HHHHHhHHHHHHHHHHHcCCCHHHHH-HHHHHHHHHHHHHHHHhhhhcC-c-cccc-CCCCceeEEEEecceEEEEECCC
Confidence 99999999999999999999999997 5999999999999987765433 2 1111 12245678999999999999999
Q ss_pred chhhhhhhhHHHHHHhcCCeEEecCCCCChHHH-HHHHHHHhhh-cCCCceEEecCC-HHHHHHHHhcC-CCEEEEeCCh
Q 014164 180 NYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATS-SLLAKLLEDY-VDNSAVRVVEGA-VAETSALLEQK-WDKILYTGSP 255 (429)
Q Consensus 180 n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~-~~l~~~l~~a-lP~~~v~~v~~~-~~~~~~L~~~~-v~~v~ftGs~ 255 (429)
|||+...++++++||++||+||+|||+.+|+++ .++++++.++ +|+|++|+++|+ .+.++.|++|+ +|.|.||||+
T Consensus 159 N~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I~fTGS~ 238 (508)
T 3r64_A 159 NFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGST 238 (508)
T ss_dssp SSHHHHHHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCSEEEEESCH
T ss_pred cchHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCccEEEEECCH
Confidence 999999999999999999999999999999999 9999999999 999999999994 78899999997 9999999999
Q ss_pred HHHHHHHHHHhc--ccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHH
Q 014164 256 RVGRIVMAAAAK--HLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNE 333 (429)
Q Consensus 256 ~~~~~i~~~~~~--~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~ 333 (429)
.+|+.|.+.+++ +++|+++|+|||||+||++|||++.|++.+++++| +|+||.|+++++||||+++|++|+++|+++
T Consensus 239 ~~g~~i~~~aa~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~ 317 (508)
T 3r64_A 239 PVGRRVGELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAF-LHQGQICMSINRVIVDAAVHDEFLEKFVEA 317 (508)
T ss_dssp HHHHHHHHHHHSSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHH-TSTTCTTTCCSEEEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHH-hcCCCCcccCcEEEEehhHHHHHHHHHHHH
Confidence 999999999998 89999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhhc-CCEEEeCCccCCCCceEecEEEecCCCCCCccccCcccccee
Q 014164 334 LKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKV-SDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLP 411 (429)
Q Consensus 334 ~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~-~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~ 411 (429)
++++++|+|. +++++||++++.+++++.+++++++. |+++++||.. .|+|++|||+.+++++|++++||+||||++
T Consensus 318 ~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~ 395 (508)
T 3r64_A 318 VKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI--EGRLVHPHVFSDVTSDMEIAREEIFGPLIS 395 (508)
T ss_dssp HHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE--ETTEECCEEEEEECTTSGGGTSCCCSSEEE
T ss_pred HHhccCCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC--CCcEEecEEEecCCCCChhhcccccCceEE
Confidence 9999999996 58999999999999999999999864 7799999976 689999999999999999999999999999
Q ss_pred eEecCCHHHHHHHHHhh
Q 014164 412 IVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 412 v~~~~~~~eai~l~n~~ 428 (429)
|++|+|++|||+++|++
T Consensus 396 v~~~~~~deAi~~aN~~ 412 (508)
T 3r64_A 396 VLKADDEAHAAELANAS 412 (508)
T ss_dssp EEEESSHHHHHHHHTSS
T ss_pred EEEeCCHHHHHHHHhCC
Confidence 99999999999999975
No 30
>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=2.9e-81 Score=634.91 Aligned_cols=395 Identities=21% Similarity=0.288 Sum_probs=362.3
Q ss_pred cccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHH
Q 014164 18 CLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQS 97 (429)
Q Consensus 18 ~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~ 97 (429)
+..++|||| +|+.+.++++++++|| +||++++ .++.++.+|+++|+++|++||+.|+.++..+|.++|++
T Consensus 5 ~~~~~~i~g-~~~~~~~~~~~~~~~P--------~t~~~~~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~ 74 (485)
T 4dng_A 5 TLNKSFING-KWTGGESGRTEDILNP--------YDQSVIT-TASLATGKQLEDAFDIAQKAQKEWAKSTTEDRKAVLQK 74 (485)
T ss_dssp GCCSEEETT-EEECCSSSCEEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHH
T ss_pred cccceeECC-EEecCCCCCeEEeECC--------CCCCEEE-EEcCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHH
Confidence 346799999 9999888866666666 8999988 67799999999999999999999999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEc
Q 014164 98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVIS 177 (429)
Q Consensus 98 ~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~ 177 (429)
+++.|+++.++|++++++|+|||+.+++ .|+..+++.++++++..+...+.. .... ...+...++.++|+|||++|+
T Consensus 75 ~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~~~~-~~~~-~~~~~~~~~~~~P~GVv~~I~ 151 (485)
T 4dng_A 75 ARGYLHENRDDIIMMIARETGGTIIKST-IELEQTIAILDEAMTYTGELGGVK-EVPS-DIEGKTNKIYRLPLGVISSIS 151 (485)
T ss_dssp HHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHGGGCSCEE-CCCC-SSTTEEEEEEEEECCEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhCCee-cccc-CCCCceEEEEEecceEEEEEC
Confidence 9999999999999999999999999997 599999999999999887643322 1111 123456789999999999999
Q ss_pred CCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHH-HHHHHHHhhh-cCCCceEEecCCH-HHHHHHHhcC-CCEEEEeC
Q 014164 178 TWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATS-SLLAKLLEDY-VDNSAVRVVEGAV-AETSALLEQK-WDKILYTG 253 (429)
Q Consensus 178 p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~-~~l~~~l~~a-lP~~~v~~v~~~~-~~~~~L~~~~-v~~v~ftG 253 (429)
|||||+...++++++||++||+||+|||+.+|+++ .+|.+++.++ +|+|+||+++|+. +.++.|++|+ ++.|.|||
T Consensus 152 PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~~v~fTG 231 (485)
T 4dng_A 152 PFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPRLISFTG 231 (485)
T ss_dssp CSSSHHHHHHHHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCSEEEEEE
T ss_pred CCccHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCCEEEEEC
Confidence 99999999999999999999999999999999999 9999999999 9999999999965 4889999997 99999999
Q ss_pred ChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHH
Q 014164 254 SPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNE 333 (429)
Q Consensus 254 s~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~ 333 (429)
|+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| +|+||.|+++++||||+++|++|+++|+++
T Consensus 232 S~~~g~~i~~~aa~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~~~GQ~C~a~~rvlV~~~i~d~f~~~l~~~ 310 (485)
T 4dng_A 232 STAVGRHIGEIAGRAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKF-IHQGQICMIINRIIVHQDVYDEFVEKFTAR 310 (485)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHT-TCC----CCEEEEEEEHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHhhhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHH-hcCCCccccCCEEEEeHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccCCCCceEecEEEecCCCCCCccccCcccccee
Q 014164 334 LKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLP 411 (429)
Q Consensus 334 ~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~ 411 (429)
++++++|+|. +++++||++++.+++++.++++++. .|+++++||.. .|+|++|||+.+++++|++++||+||||++
T Consensus 311 ~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~--~g~~~~Ptvl~~v~~~~~i~~eE~FGPvl~ 388 (485)
T 4dng_A 311 VKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR--VGNVLTPYVFVGADNNSKIAQTELFAPIAT 388 (485)
T ss_dssp HHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--ETTEECCEEEESCCTTSHHHHCCCCSSEEE
T ss_pred HHhccCCCCCcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC--CCcEECCEEEecCCCCChhhcCccccceEE
Confidence 9999999996 5889999999999999999999986 57899999976 689999999999999999999999999999
Q ss_pred eEecCCHHHHHHHHHhh
Q 014164 412 IVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 412 v~~~~~~~eai~l~n~~ 428 (429)
|++|+|++|||+++|++
T Consensus 389 v~~~~~~~eAi~~an~~ 405 (485)
T 4dng_A 389 IIKAGSDQEAIDMANDT 405 (485)
T ss_dssp EEEESSHHHHHHHHHCS
T ss_pred EEEeCCHHHHHHHHhCC
Confidence 99999999999999975
No 31
>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.5e-80 Score=629.54 Aligned_cols=391 Identities=19% Similarity=0.295 Sum_probs=362.4
Q ss_pred cceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHH
Q 014164 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIA 99 (429)
Q Consensus 20 ~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a 99 (429)
+++|||| +|+++.+ .+ +...||+||++++ .++.++.+|+++++++|++||+.|+.++..+|.++|++++
T Consensus 6 ~~~~I~G-~~~~~~~-~~--------~~~~~P~tg~~~~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a 74 (490)
T 3ju8_A 6 STHYIAG-QWLAGQG-ET--------LESLDPVGQGVVW-SGRGADATQVDAAVCAAREAFPAWARRPLEQRIELLERFA 74 (490)
T ss_dssp CCEEETT-EEECCCS-CE--------EEEECTTTCCEEE-EEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHH
T ss_pred cCceECC-EEecCCC-Ce--------EEEECCCCCCEEE-EECCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHH
Confidence 4799999 9998753 33 4445569999998 6779999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCC
Q 014164 100 NMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTW 179 (429)
Q Consensus 100 ~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~ 179 (429)
++|++++++|++++++|+|||..+++ .|+..+++.++|++...+.+.+..... ..+...++.++|+|||++|+||
T Consensus 75 ~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~P~GVv~~I~Pw 149 (490)
T 3ju8_A 75 ATLKSRADELARVIGEETGKPLWESA-TEVTSMVNKVAISVQAFRERTGEKSGP----LADATAVLRHKPHGVVAVFGPY 149 (490)
T ss_dssp HHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHHSCCEEEE----ETTEEEEEEEEECSEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccc----CCCCeeeEEECCCCEEEEECCC
Confidence 99999999999999999999999996 799999999999999988876654321 1234557789999999999999
Q ss_pred chhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCCHHHHHHHHhcC-CCEEEEeCChHH
Q 014164 180 NYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRV 257 (429)
Q Consensus 180 n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~ftGs~~~ 257 (429)
|||+...++++++||++||+||+|||+.+|+++.++++++.++ +|+|++|+++|+.+.++.|++|+ +|.|.||||+.+
T Consensus 150 N~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~fTGS~~~ 229 (490)
T 3ju8_A 150 NFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFFTGSSRT 229 (490)
T ss_dssp SSTTHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCCSHHHHHHHHTCTTCSEEEEESCHHH
T ss_pred cchHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEEECcHHH
Confidence 9999999999999999999999999999999999999999999 99999999999888999999997 999999999999
Q ss_pred HHHHHHHHhcccCce-eeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCc-hHHHHHHHHHHHh
Q 014164 258 GRIVMAAAAKHLTPV-ILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDF-APKLIDSLRNELK 335 (429)
Q Consensus 258 ~~~i~~~~~~~~~~~-~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~-~~~f~~~l~~~~~ 335 (429)
|+.|.+.++++++|+ ++|+|||||+||++|||++.|++.+++++| +|+||.|++++++|||+++ +++|+++|+++++
T Consensus 230 g~~i~~~aa~~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~ 308 (490)
T 3ju8_A 230 GNLLHSQFGGQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAF-ISAGQRCTCARRLLVPQGAWGDALLARLVAVSA 308 (490)
T ss_dssp HHHHHHHTTTCTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhccCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHH-hcCCCCCcCCCEEEEECCccHHHHHHHHHHHHH
Confidence 999999999999998 799999999999999999999999999999 9999999999999999997 9999999999999
Q ss_pred hhhCCC-CC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCcc-CCCCceEecEEEecCCCCCCccccCcccccee
Q 014164 336 EFFGKN-PM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLP 411 (429)
Q Consensus 336 ~~~~g~-~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~ 411 (429)
++++|+ |. +++++||++++.+++++.++++++. .|+++++||.. +..|+|++|||+. ++++|++++||+||||++
T Consensus 309 ~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEiFGPVl~ 387 (490)
T 3ju8_A 309 TLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEFFGPLLQ 387 (490)
T ss_dssp HCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCCCSSEEE
T ss_pred hccCCCCCCCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccccccEEE
Confidence 999998 75 6889999999999999999999985 57899999865 4578999999999 999999999999999999
Q ss_pred eEecCCHHHHHHHHHhh
Q 014164 412 IVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 412 v~~~~~~~eai~l~n~~ 428 (429)
|++|+|++|||+++|++
T Consensus 388 v~~~~~~~eAi~~aN~~ 404 (490)
T 3ju8_A 388 VIRYSDFAAAIREANAT 404 (490)
T ss_dssp EEEESSHHHHHHHHHCS
T ss_pred EEEeCCHHHHHHHHhcC
Confidence 99999999999999975
No 32
>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*
Probab=100.00 E-value=2.9e-81 Score=632.85 Aligned_cols=389 Identities=22% Similarity=0.358 Sum_probs=360.6
Q ss_pred ccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHH
Q 014164 19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSI 98 (429)
Q Consensus 19 ~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~ 98 (429)
..++|||| +|+.+.+ +++++|| +||++++ .++.++.+|+++++++|++||+.|+.+++.+|.++|+++
T Consensus 4 ~~~~~i~g-~~~~~~~--~~~~~~P--------~tg~~i~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~ 71 (475)
T 1euh_A 4 QYKNYVNG-EWKLSEN--EIKIYEP--------ASGAELG-SVPAMSTEEVDYVYASAKKAQPAWRALSYIERAAYLHKV 71 (475)
T ss_dssp BCCEEETT-EEECCSS--EEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred ccceeECC-EEecCCC--ceEEECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHH
Confidence 34789999 9998744 5666655 9999998 677999999999999999999999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCC----Ccc-eEEeecceEE
Q 014164 99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYP----SSA-EIISEPLGVV 173 (429)
Q Consensus 99 a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~P~Gvv 173 (429)
+++|+++.++|++++++|+|||+.+++ .|+..+++.++|+++..+++.+.... .. ..+ ... ++.++|+|||
T Consensus 72 a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~P~GVv 147 (475)
T 1euh_A 72 ADILMRDKEKIGAILSKEVAKGYKSAV-SEVVRTAEIINYAAEEGLRMEGEVLE-GG--SFEAASKKKIAVVRREPVGLV 147 (475)
T ss_dssp HHHHHHTHHHHHHHHHHHHTCCHHHHH-HHHHHHHHHHHHHHHHHTTCCEEEEE-GG--GTCGGGTTEEEEEEEEECSEE
T ss_pred HHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCCccc-CC--CCCccccceeeEEEEeccceE
Confidence 999999999999999999999999996 79999999999999999887654321 11 123 355 8999999999
Q ss_pred EEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCC-HHHHHHHHhcC-CCEEE
Q 014164 174 LVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGA-VAETSALLEQK-WDKIL 250 (429)
Q Consensus 174 ~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~-~~~~~~L~~~~-v~~v~ 250 (429)
++|+|||||+...++++++||++||+||+|||+.+|+++.++++++.++ +|+|+||+++|+ .+.++.|++|+ +|.|.
T Consensus 148 ~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~ 227 (475)
T 1euh_A 148 LAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQAVNFIN 227 (475)
T ss_dssp EEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCTTCCEEE
T ss_pred EEECCCCchHHHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCCCcCEEE
Confidence 9999999999999999999999999999999999999999999999999 999999999995 55789999997 99999
Q ss_pred EeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHH
Q 014164 251 YTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSL 330 (429)
Q Consensus 251 ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l 330 (429)
||||+.+|+.|.+.++ ++|+++|+|||||+||++|||++.|++.+++++| +|+||.|+++++||||+++|++|+++|
T Consensus 228 fTGS~~~g~~i~~~aa--~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l 304 (475)
T 1euh_A 228 FTGSTGIGERIGKMAG--MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAF-GYSGQRCTAVKRVLVMESVADELVEKI 304 (475)
T ss_dssp EESCHHHHHHHHHHTT--TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCSSSEEEEEEEHHHHHHHHHHH
T ss_pred EECchHHHHHHHHhcC--CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHh-hcCCCcCCCCcEEEEehhHHHHHHHHH
Confidence 9999999999999887 8999999999999999999999999999999999 999999999999999999999999999
Q ss_pred HHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccc
Q 014164 331 RNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPL 409 (429)
Q Consensus 331 ~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv 409 (429)
+++++++++|+|.+++++||++++.+++++.++++++. .|+++++||.. .|+|++|||+.+++++|++++||+||||
T Consensus 305 ~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~--~g~~~~Ptvl~~v~~~~~~~~eE~FGPv 382 (475)
T 1euh_A 305 REKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKR--EGNLICPILFDKVTTDMRLAWEEPFGPV 382 (475)
T ss_dssp HHHHHTSCBSCGGGTCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE--ETTEECCEEEESCCTTSGGGTSCCCSSE
T ss_pred HHHHHhccCCCccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCceeCCEEEeCCCCcCHHHcCccccce
Confidence 99999999999976889999999999999999999986 57799999875 5899999999999999999999999999
Q ss_pred eeeEecCCHHHHHHHHHhh
Q 014164 410 LPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 410 ~~v~~~~~~~eai~l~n~~ 428 (429)
++|++|+|++|||+++|++
T Consensus 383 l~v~~~~~~~eai~~an~~ 401 (475)
T 1euh_A 383 LPIIRVTSVEEAIEISNKS 401 (475)
T ss_dssp EEEEEESCHHHHHHHHHHS
T ss_pred EEEEecCCHHHHHHHHhCC
Confidence 9999999999999999975
No 33
>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*
Probab=100.00 E-value=2.7e-81 Score=632.65 Aligned_cols=381 Identities=25% Similarity=0.377 Sum_probs=349.4
Q ss_pred eeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHH
Q 014164 22 SFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANM 101 (429)
Q Consensus 22 ~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~ 101 (429)
+|||| +|+.+ +. ++++|| +||++++ .++.++.+|+++|+++|++||+.|+.+++.+|.++|++++++
T Consensus 2 ~~I~G-~~~~~--~~-~~~~nP--------~tg~~i~-~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~ 68 (486)
T 3pqa_A 2 MFIDG-KWINR--ED-MDVINP--------YSLEVIK-KIPALSREEAKEAIDTAEKYKEVMKNLPITKRYNILMNIAKQ 68 (486)
T ss_dssp --------CCC--CC-EEEECT--------TTCCEEE-EECCCCHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHHHHHH
T ss_pred eeECC-EEecC--CC-eEEECC--------CCCCEEE-EEcCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHH
Confidence 69999 99986 33 555555 9999998 777999999999999999999999999999999999999999
Q ss_pred HHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCch
Q 014164 102 IEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNY 181 (429)
Q Consensus 102 l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~ 181 (429)
|+++.++|++++++|+|||..+++ .|+..+++.++|++..+++|.+..... .+...++.++|+|||++|+||||
T Consensus 69 l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~-----~~~~~~~~~~P~GVv~~I~PwN~ 142 (486)
T 3pqa_A 69 IKEKKEELAKILAIDAGKPIKQAR-VEVERSIGTFKLAAFYVKEHRDEVIPS-----DDRLIFTRREPVGIVGAITPFNF 142 (486)
T ss_dssp HHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCCEEEECC-----TTEEEEEEEEECSEEEEEECSSS
T ss_pred HHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCceecC-----CCceeEEEEccccEEEEECCCch
Confidence 999999999999999999999996 699999999999999999876543211 14567899999999999999999
Q ss_pred hhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-----cCCCceEEecCC-HHHHHHHHhcC-CCEEEEeCC
Q 014164 182 PFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-----VDNSAVRVVEGA-VAETSALLEQK-WDKILYTGS 254 (429)
Q Consensus 182 P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-----lP~~~v~~v~~~-~~~~~~L~~~~-v~~v~ftGs 254 (429)
|+...++++++||++||+||+|||+.+|+++.++++++.++ +|+|++|+++|+ .+.++.|++|+ +|.|.||||
T Consensus 143 P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~vd~V~fTGS 222 (486)
T 3pqa_A 143 PLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKVNMISFTGS 222 (486)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTCCEEEEESC
T ss_pred HHHHHHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCccEEEEECC
Confidence 99999999999999999999999999999999999999988 999999999994 55689999997 999999999
Q ss_pred hHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHH
Q 014164 255 PRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL 334 (429)
Q Consensus 255 ~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~ 334 (429)
+.+|+.|.+.++ ++|+++|+|||||+||++|||++.|++.+++++| +|+||.|+++++||||+++|++|+++|++++
T Consensus 223 ~~~g~~i~~~aa--~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~ 299 (486)
T 3pqa_A 223 SKVGELITKKAG--FKKIALELGGVNPNIVLKDADLNKAVNALIKGSF-IYAGQVCISVGMILVDESIADKFIEMFVNKA 299 (486)
T ss_dssp HHHHHHHHHHCC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTSEEEEEEEGGGHHHHHHHHHHHH
T ss_pred hHHHHHHHHHcC--CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHH-hcCCCCccCCcEEEEeHHHHHHHHHHHHHHH
Confidence 999999999887 8999999999999999999999999999999999 9999999999999999999999999999999
Q ss_pred hhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccceee
Q 014164 335 KEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPI 412 (429)
Q Consensus 335 ~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v 412 (429)
+++++|+|. +++++||++++.+++++.++|+++. .|+++++||.. .|+|++|||+ +++++|++++||+||||++|
T Consensus 300 ~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~g~~~~Ptvl-~v~~~~~i~~eEiFGPVl~v 376 (486)
T 3pqa_A 300 KVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR--DKALFYPTIL-EVDRDNILCKTETFAPVIPI 376 (486)
T ss_dssp HTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE--ETTEECCEEE-ECCTTSGGGTCCCCSSEEEE
T ss_pred HhcccCCCCcCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC--CCcEeccEEE-eCCCCChhhcccccccEEEE
Confidence 999999996 6899999999999999999999986 57899999975 5899999999 99999999999999999999
Q ss_pred EecCCHHHHHHHHHhh
Q 014164 413 VTVSIVSSAHFKLKAC 428 (429)
Q Consensus 413 ~~~~~~~eai~l~n~~ 428 (429)
++|+| +|||+++|++
T Consensus 377 ~~~~~-deAi~~aN~~ 391 (486)
T 3pqa_A 377 IRTNE-EEMIDIANST 391 (486)
T ss_dssp EEECH-HHHHHHHTCS
T ss_pred EEEcH-HHHHHHHhcC
Confidence 99999 9999999975
No 34
>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}
Probab=100.00 E-value=2.7e-81 Score=634.33 Aligned_cols=393 Identities=21% Similarity=0.283 Sum_probs=361.7
Q ss_pred cceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHH
Q 014164 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIA 99 (429)
Q Consensus 20 ~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a 99 (429)
.++|||| +|+.+.++.+++++|| +||++++ .++.++.+|+++|+++|++||+.|+.++..+|.++|++++
T Consensus 6 ~~~~i~g-~~~~~~~~~~~~~~~P--------~t~~~~~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a 75 (486)
T 1t90_A 6 LKNYING-EWVESKTDQYEDVVNP--------ATKEVLC-QVPISTKEDIDYAAQTAAEAFKTWSKVAVPRRARILFNFQ 75 (486)
T ss_dssp CCEEETT-EEECCSCSCEEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred cceeECC-EEecCCCCCeEEEECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHH
Confidence 4689999 9999877755665555 9999988 6779999999999999999999999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCC
Q 014164 100 NMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTW 179 (429)
Q Consensus 100 ~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~ 179 (429)
++|++++++|++++++|+|||+.++. .|+..+++.++|+++..+...+ +.... ...+...++.++|+|||++|+||
T Consensus 76 ~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~~~~~a~~~~~~~g-~~~~~--~~~~~~~~~~~~P~GVV~~I~Pw 151 (486)
T 1t90_A 76 QLLSQHKEELAHLITIENGKNTKEAL-GEVGRGIENVEFAAGAPSLMMG-DSLAS--IATDVEAANYRYPIGVVGGIAPF 151 (486)
T ss_dssp HHHHTTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHTTHHHHHCE-EEEEE--EETTEEEEEEEEECSEEEEECCS
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcC-ccccc--CCCCceeEEEecccCEEEEECCC
Confidence 99999999999999999999999996 7999999999999876554333 22111 11234568899999999999999
Q ss_pred chhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCCHHHHHHHHhcC-CCEEEEeCChHH
Q 014164 180 NYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRV 257 (429)
Q Consensus 180 n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~ftGs~~~ 257 (429)
|||+...++++++||++||+||+|||+.+|+++.+|++++.++ +|+|++|+++|+.+.+..|++|+ +|.|.||||+.+
T Consensus 152 N~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~fTGS~~~ 231 (486)
T 1t90_A 152 NFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPV 231 (486)
T ss_dssp SCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTEEEEEEESCHHH
T ss_pred chhHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhCCCCCEEEEeCCHHH
Confidence 9999999999999999999999999999999999999999999 99999999999878899999997 999999999999
Q ss_pred HHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccE-EEEeCCchHHHHHHHHHHHhh
Q 014164 258 GRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDY-IITTKDFAPKLIDSLRNELKE 336 (429)
Q Consensus 258 ~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~-v~V~~~~~~~f~~~l~~~~~~ 336 (429)
|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++| .|+||.|+++++ +|||++ +++|+++|++++++
T Consensus 232 g~~i~~~aa~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvv~v~~~-~d~f~~~l~~~~~~ 309 (486)
T 1t90_A 232 GEYVYKKGSENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAF-GSAGERCMACAVVTVEEGI-ADEFMAKLQEKVAD 309 (486)
T ss_dssp HHHHHHHHHHTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHH-HHHHHHHHHHHHTT
T ss_pred HHHHHHHHhccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHH-hCCCCCcccCCeeEEecCC-HHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999 999999999999 999999 99999999999999
Q ss_pred hhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCcc--CCCCceEecEEEecCCCCCCccccCccccceee
Q 014164 337 FFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQR--DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPI 412 (429)
Q Consensus 337 ~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~--~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v 412 (429)
+++|+|. +++++||++++.+++++.++++++. .|+++++||.. +..|+|++|||+.+++++|++++||+||||++|
T Consensus 310 ~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEiFGPvl~v 389 (486)
T 1t90_A 310 IKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSV 389 (486)
T ss_dssp CCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCCCSSEEEE
T ss_pred cccCCCCccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcccCceEEE
Confidence 9999986 5889999999999999999999985 47899999974 236899999999999999999999999999999
Q ss_pred EecCCHHHHHHHHHhh
Q 014164 413 VTVSIVSSAHFKLKAC 428 (429)
Q Consensus 413 ~~~~~~~eai~l~n~~ 428 (429)
++|+|++|||+++|++
T Consensus 390 ~~~~~~~eai~~aN~~ 405 (486)
T 1t90_A 390 IRVKNLKEAIEIANKS 405 (486)
T ss_dssp EEESSHHHHHHHHHHS
T ss_pred EEeCCHHHHHHHHhCC
Confidence 9999999999999975
No 35
>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}
Probab=100.00 E-value=2.5e-80 Score=625.31 Aligned_cols=375 Identities=21% Similarity=0.310 Sum_probs=354.2
Q ss_pred eEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhh
Q 014164 46 FSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETF 125 (429)
Q Consensus 46 ~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~ 125 (429)
+.+.||+||++++ .++.++.+|+++|+++|++||+.|+.+++.+|.++|++++++|+++.++|++++++|+|||..+++
T Consensus 6 ~~~~nP~tg~~i~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~ 84 (484)
T 3ros_A 6 YQSVNPYTNEAFA-SYDNPTSKQIDEAINLAHALYKKWRHEEPASRAEILHDIANALKEHEDELAKMMTLEMGKLLSESK 84 (484)
T ss_dssp CEEEETTTTEEEE-ECCCCCHHHHHHHHHHHHHHHHHHTTSCTHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHH
T ss_pred cceeCCCCCCEEE-EECCCCHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 5666779999998 788999999999999999999999999999999999999999999999999999999999999997
Q ss_pred HhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCC
Q 014164 126 ISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPS 205 (429)
Q Consensus 126 ~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps 205 (429)
.|+..+++.++|+++.+++|.+...... .+...++.++|+|||++|+|||||+...++++++||++||+||+|||
T Consensus 85 -~ev~~~~~~~~~~a~~~~~~~~~~~~~~----~~~~~~~~~~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps 159 (484)
T 3ros_A 85 -EEVELCVSICNYYADHGPEMLKPTKLNS----DLGNAYYLKQSTGVIMACEPWNFPLYQVIRVFAPNFIVGNPILLKHA 159 (484)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHTSCEEECC----TTSEEEEEEECCCEEEEECCSSSTTHHHHHHHHHHHHHTCCEEEECC
T ss_pred -HHHHHHHHHHHHHHHHHHHhcCCeeccC----CCceeEEEecCCceEEEECCCchHHHHHHHHHHHHHHcCCEEEEECC
Confidence 7999999999999999999887654321 35678999999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHhhh-cCCCceEEecCCHH-HHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcE
Q 014164 206 EIAPATSSLLAKLLEDY-VDNSAVRVVEGAVA-ETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPA 282 (429)
Q Consensus 206 ~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~~-~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~ 282 (429)
+.+|+++.+|++++.++ +|+|++|+|+|+.+ .++ |++|+ +|.|.||||+.+|+.|.+.++++++|+++|+|||||+
T Consensus 160 ~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~fTGS~~~G~~i~~~aa~~lk~v~lELGGk~p~ 238 (484)
T 3ros_A 160 HNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVALTGSERGGSAVAEAAGKNLKKSTMELGGNDAF 238 (484)
T ss_dssp TTCHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEEEESCHHHHHHHHHHHHHTTCEEEEECCCCCEE
T ss_pred CCChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEEEECCHHHHHHHHHHHhccCCceEeecCCCCcc
Confidence 99999999999999999 99999999999654 566 99997 9999999999999999999999999999999999999
Q ss_pred EEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHH
Q 014164 283 VVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLA 361 (429)
Q Consensus 283 iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~ 361 (429)
||++|||++.|++.+++++| +|+||.|++++|||||+++|++|+++|+++++++++|+|. +++++||++++.+++++.
T Consensus 239 iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~ 317 (484)
T 3ros_A 239 IVLDDADPQVLRNVLNDART-YNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLE 317 (484)
T ss_dssp EECTTCCHHHHHHHHTTTTT-GGGGCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHH
T ss_pred eeCCCCCHHHHHHHHHHHHh-cCCCCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHH
Confidence 99999999999999999999 9999999999999999999999999999999999999996 689999999999999999
Q ss_pred hHHHhhh-cCCEEEeCCcc-CCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014164 362 SLLDEDK-VSDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 362 ~~i~~a~-~~~~vl~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
++|+++. .|+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++
T Consensus 318 ~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~ 386 (484)
T 3ros_A 318 AQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDS 386 (484)
T ss_dssp HHHHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSS
T ss_pred HHHHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCcccccccccceEEEEEcCCHHHHHHHHhCC
Confidence 9999986 57899999975 4579999999999999999999999999999999999999999999975
No 36
>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*
Probab=100.00 E-value=9.9e-81 Score=631.34 Aligned_cols=391 Identities=21% Similarity=0.319 Sum_probs=360.3
Q ss_pred ccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhh-hhcCCCHHHHHHHHHH
Q 014164 19 LNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYN-SRKTKSYEWRMSQIQS 97 (429)
Q Consensus 19 ~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~-~w~~~~~~~R~~~L~~ 97 (429)
..++|||| +|+.+. .+++++|| +||++++ .++.++.+|+++|+++|++||+ .|+.+++.+|.++|++
T Consensus 18 ~~~~~i~g-~~~~~~--~~~~v~nP--------~tg~~i~-~~~~~~~~~v~~av~~A~~A~~~~w~~~~~~~R~~~L~~ 85 (501)
T 1uxt_A 18 VYPSYLAG-EWGGSG--QEIEVKSP--------IDLATIA-KVISPSREEVERTLDVLFKRGRWSARDMPGTERLAVLRK 85 (501)
T ss_dssp EECEECSS-SEECCS--CEEEEECT--------TTCCEEE-EEECCCHHHHHHHHHHHHHTHHHHHHTSCHHHHHHHHHH
T ss_pred ccceeECC-EEecCC--CeEEEECC--------CCCCEEE-EEeCCCHHHHHHHHHHHHHHhhhhhccCCHHHHHHHHHH
Confidence 45799999 999873 45555555 8999998 7779999999999999999999 9999999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCC--CCcceEEeecceEEEE
Q 014164 98 IANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTY--PSSAEIISEPLGVVLV 175 (429)
Q Consensus 98 ~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~P~Gvv~~ 175 (429)
++++|++++++|++++++|+|||..+++ .|+..+++.++|+++.++++.+... ....... +...++.++|+|||++
T Consensus 86 ~a~~l~~~~~ela~~~~~e~Gk~~~ea~-~Ev~~~~~~l~~~a~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~P~GVv~~ 163 (501)
T 1uxt_A 86 AADIIERNLDVFAEVLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYI-PGDWTYDTLETEGLVRREPLGVVAA 163 (501)
T ss_dssp HHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHTGGGGGGGTCCEEE-ESTTSSTTTTEEEEEEEEECSEEEE
T ss_pred HHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHHhcCccc-cccccCCCcCceEEEEEeeccEEEE
Confidence 9999999999999999999999999997 7999999999999999888754331 1110011 2256899999999999
Q ss_pred EcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCCHHHHHHHHhcC-CCEEEEeC
Q 014164 176 ISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTG 253 (429)
Q Consensus 176 i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~ftG 253 (429)
|+|||||+...++++++||++||+||+|||+.+|+++.++++++.++ +|+|++|+++|+.+.++.|++|+ +|.|.|||
T Consensus 164 I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~vd~I~FTG 243 (501)
T 1uxt_A 164 ITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRVAAVSFTG 243 (501)
T ss_dssp ECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEEEES
T ss_pred ECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHhCCCcCEEEEeC
Confidence 99999999999999999999999999999999999999999999999 99999999999667889999996 99999999
Q ss_pred ChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHH
Q 014164 254 SPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNE 333 (429)
Q Consensus 254 s~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~ 333 (429)
|+.+|+.|.+.++ ++|+++|+|||||+||++|||++.|++.+++++| +|+||.|+++++||||+++|++|+++|+++
T Consensus 244 S~~~G~~i~~~aa--l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~ 320 (501)
T 1uxt_A 244 STEVGERVVKVGG--VKQYVMELGGGDPAIVLEDADLDLAADKIARGIY-SYAGQRCDAIKLVLAERPVYGKLVEEVAKR 320 (501)
T ss_dssp CHHHHHHHHHHHC--SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHhcC--CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHh-cCCCCCCcCCcEEEeccchHHHHHHHHHHH
Confidence 9999999999887 8999999999999999999999999999999999 999999999999999999999999999999
Q ss_pred HhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhh-cCCEEEeCCccCCCC-ceEecEEEecCC---CCCCccccCccc
Q 014164 334 LKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDK-VSDKIVYGGQRDEKQ-LKIAPTILLDVP---DDSTIMKEEIFG 407 (429)
Q Consensus 334 ~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~~g-~~~~Ptvl~~~~---~~~~~~~~E~fg 407 (429)
++++++|+|. +++++||++++.+++++.++++++. .|+++++||.. .| +|++|||+.+++ ++|.+++||+||
T Consensus 321 ~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~--~g~~~~~Ptvl~~v~~~~~~~~i~~eEiFG 398 (501)
T 1uxt_A 321 LSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR--LGPTYVQPTFVEAPADRVKDMVLYKREVFA 398 (501)
T ss_dssp HHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB--CSSSCBCCEEEECCHHHHTTSHHHHSCCCS
T ss_pred HHhccCCCccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCEEEeCCCCCCCcCHHHhCcccC
Confidence 9999999996 5899999999999999999999986 46799999976 68 999999999999 999999999999
Q ss_pred cceeeEecCCHHHHHHHHHhh
Q 014164 408 PLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 408 Pv~~v~~~~~~~eai~l~n~~ 428 (429)
||++|++|+|++|||+++|++
T Consensus 399 PVl~v~~~~~~deAi~~aN~~ 419 (501)
T 1uxt_A 399 PVALAVEVKDLDQAIELANGR 419 (501)
T ss_dssp SEEEEEEESSHHHHHHHHHTS
T ss_pred ceEEEEeeCCHHHHHHHHhcC
Confidence 999999999999999999985
No 37
>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A
Probab=100.00 E-value=4.1e-80 Score=631.87 Aligned_cols=404 Identities=17% Similarity=0.171 Sum_probs=363.5
Q ss_pred hhhhhhhcccccccceeeecceeeccCCccccccccCCceEeeeCCc-chhhhhcccCCCHHHHHHHHHHHHHHhhhhcC
Q 014164 7 RAFQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSAT-MAAEEKQMQRFDVEKAASLMKELRNNYNSRKT 85 (429)
Q Consensus 7 ~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~t-g~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~ 85 (429)
.+|.++... ..+.++|||| +|+.+.+ + ....||+| |++++ .++.++.+|+++||++|++||+.|+.
T Consensus 52 ~a~~~~~~~-~~~~~~~I~G-~~~~~~~--~--------~~~~~P~~~~~~i~-~~~~a~~~dv~~Av~aA~~A~~~W~~ 118 (563)
T 4e3x_A 52 KALKDLKGQ-TEAIPCVVGD-EEVWTSD--I--------QYQLSPFNHAHKVA-KFCYADKALLNRAIDAALAARKEWDL 118 (563)
T ss_dssp HHHHTTTTC-CEECCEEETT-EEECCSC--E--------EEEEETTEEEEEEE-EEECCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhC-CccCCeEECC-EEeecCC--c--------eeeeCCCCCCcEEE-EEeCCCHHHHHHHHHHHHHHHHHHhc
Confidence 455665554 4678999999 9998643 2 33456687 67887 67799999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHh-HHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcce
Q 014164 86 KSYEWRMSQIQSIANMIEEK-EEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAE 164 (429)
Q Consensus 86 ~~~~~R~~~L~~~a~~l~~~-~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (429)
+++.+|+++|++++++|+++ +++|++++++|+|||+.+++..++..+++.++|+++.++++.+...... ..+...+
T Consensus 119 ~~~~~R~~iL~~~a~~l~~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~---~~~~~~~ 195 (563)
T 4e3x_A 119 KPMADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISV---PPSTNHT 195 (563)
T ss_dssp SCHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCC---TTEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHhccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCC---CCCcceE
Confidence 99999999999999999998 9999999999999999999753499999999999999998877543221 1123345
Q ss_pred EEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCC-HHHHHHHH
Q 014164 165 IISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGA-VAETSALL 242 (429)
Q Consensus 165 ~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~-~~~~~~L~ 242 (429)
.++.|+|||++|+|||||+....+++++|| +||+||+|||+.+|+++.++++++.++ +|+|+||+|+|+ .+.++.|+
T Consensus 196 ~~r~p~GVV~~I~PwNfP~~~~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~ 274 (563)
T 4e3x_A 196 VYRGLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVT 274 (563)
T ss_dssp ECCBCSSEEEEECCSSCHHHHHHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHT
T ss_pred EEecCceEEEEECCchHHHHHHHHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHH
Confidence 677778999999999999999999999999 699999999999999999999999999 999999999995 45789999
Q ss_pred hcC-CCEEEEeCChHHHHHHHHHHhcccCc------eeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccE
Q 014164 243 EQK-WDKILYTGSPRVGRIVMAAAAKHLTP------VILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDY 315 (429)
Q Consensus 243 ~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~------~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~ 315 (429)
+|+ ++.|.||||+.+|+.|.+.++++++| +++|+|||||+||++|||++.|++.+++++| .|+||.|++++|
T Consensus 275 ~hp~v~~I~FTGSt~vG~~i~~~aa~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f-~~~GQ~C~A~~r 353 (563)
T 4e3x_A 275 SSEHLCGINFTGSVPTFKHLWRQVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAF-EYGGQKCSACSR 353 (563)
T ss_dssp TCTTEEEEEEESCHHHHHHHHHHHHHTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEE
T ss_pred hCCCcCEEEEECCHHHHHHHHHHHHhhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHH-hcCCCCCcCCcE
Confidence 997 99999999999999999999998885 9999999999999999999999999999999 999999999999
Q ss_pred EEEeCCchHHHHHHHHHHHhhhhCCCC-C-CCCcccccCCHHHHHHHHhHHHhhh--cCCEEEeCCccC-CCCceEecEE
Q 014164 316 IITTKDFAPKLIDSLRNELKEFFGKNP-M-ESKDLSRIVNPFHFARLASLLDEDK--VSDKIVYGGQRD-EKQLKIAPTI 390 (429)
Q Consensus 316 v~V~~~~~~~f~~~l~~~~~~~~~g~~-~-~~~~~gpl~~~~~~~~~~~~i~~a~--~~~~vl~gg~~~-~~g~~~~Ptv 390 (429)
+|||+++|++|+++|+++++++++|+| . +++++||++++.+++++.++|++++ .|+++++||..+ ..|+|++|||
T Consensus 354 v~V~~si~d~f~~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTv 433 (563)
T 4e3x_A 354 LYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCI 433 (563)
T ss_dssp EEEEGGGHHHHHHHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEE
T ss_pred EEEecchHHHHHHHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEE
Confidence 999999999999999999999999999 5 5899999999999999999999987 467999999763 4689999999
Q ss_pred EecCCCCCCccccCccccceeeEecCC--HHHHHHHH-Hhh
Q 014164 391 LLDVPDDSTIMKEEIFGPLLPIVTVSI--VSSAHFKL-KAC 428 (429)
Q Consensus 391 l~~~~~~~~~~~~E~fgPv~~v~~~~~--~~eai~l~-n~~ 428 (429)
+.+++++|++++||+||||++|++|+| ++|||+++ |++
T Consensus 434 l~~v~~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s 474 (563)
T 4e3x_A 434 IESKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTT 474 (563)
T ss_dssp EEESCTTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSS
T ss_pred EecCCCCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCC
Confidence 999999999999999999999999997 69999999 553
No 38
>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A
Probab=100.00 E-value=2.1e-78 Score=610.82 Aligned_cols=378 Identities=22% Similarity=0.339 Sum_probs=355.4
Q ss_pred CceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchh
Q 014164 44 TSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFE 123 (429)
Q Consensus 44 ~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~ 123 (429)
.++...||+||++++ .++.++.+|+++++++|++||+.|+.++..+|.++|+++++.|+++.++|++++++|+|||..+
T Consensus 7 ~~~~~~~P~t~~~i~-~~~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~ 85 (462)
T 3etf_A 7 TQALSVNPATGQTLA-AMPWANAQEIEHALSLAASGFKKWKMTSVAQRAQTLRDIGQALRAHAEEMAQCITREMGKPIKQ 85 (462)
T ss_dssp CCSEEECTTTCCEEE-ECCCCCHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHH
T ss_pred CccceECCCCCCEEE-EecCCCHHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 335566669999998 6789999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEec
Q 014164 124 TFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLK 203 (429)
Q Consensus 124 a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~k 203 (429)
++ .|+..+++.++|+++..+++.+.... ...+...++.++|+|||++|+|||||+...++++++||++||+||+|
T Consensus 86 a~-~ev~~~~~~~~~~a~~~~~~~~~~~~----~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VvlK 160 (462)
T 3etf_A 86 AR-AEVTKSAALCDWYAEHGPAMLNPEPT----LVENQQAVIEYRPLGVILAIMPWNFPLWQVLRGAVPILLAGNSYLLK 160 (462)
T ss_dssp HH-HHHHHHHHHHHHHHHHHHHHTSCEEC----SSGGGCEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEE
T ss_pred HH-HHHHHHHHHHHHHHHhHHHhcCCccc----CCCCceeEEEeecCcEEEEECCCchHHHHHHHHHHHHHhcCCEEEEE
Confidence 97 69999999999999999888765521 12345678999999999999999999999999999999999999999
Q ss_pred CCCCChHHHHHHHHHHhhh-cCCCceEEecCCHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCc
Q 014164 204 PSEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSP 281 (429)
Q Consensus 204 ps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~ 281 (429)
||+.+|+++.++++++.++ +|+|++|+++|+.+.+..|++|+ ++.|.||||+.+|+.|.+.++++++|+++|+|||||
T Consensus 161 ps~~tp~~~~~l~~~l~~aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~fTGS~~~g~~i~~~aa~~~~~v~lElGGk~p 240 (462)
T 3etf_A 161 HAPNVTGCAQMIARILAEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTVTGSVRAGAAIGAQAGAALKKCVLELGGSDP 240 (462)
T ss_dssp CCTTCHHHHHHHHHHHHHTTCCBTTEEECCCCHHHHHHHHTSTTEEEEEEESCHHHHHHHHHHHHHTTCCEEEECCCCEE
T ss_pred CCCCCcHHHHHHHHHHHHhCCCcCeEEEEECCHHHHHHHhcCCCCCEEEEeCCchHHHHHHHHHhccCCceEEEcCCCCc
Confidence 9999999999999999999 99999999999888899999996 999999999999999999999999999999999999
Q ss_pred EEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHH
Q 014164 282 AVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARL 360 (429)
Q Consensus 282 ~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~ 360 (429)
+||++|||++.|++.+++++| +|+||.|+++++||||+++|++|+++|+++++++++|+|. +++++||+++..+++++
T Consensus 241 ~iV~~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v 319 (462)
T 3etf_A 241 FIVLNDADLELAVKAAVAGRY-QNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDEL 319 (462)
T ss_dssp EEECTTSCHHHHHHHHHHHHH-GGGGCCTTCEEEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHH
T ss_pred cEECCCCCHHHHHHHHHHHHH-hcCCCcccCCcEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHH
Confidence 999999999999999999999 9999999999999999999999999999999999999996 68899999999999999
Q ss_pred HhHHHhhh-cCCEEEeCCcc-CCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014164 361 ASLLDEDK-VSDKIVYGGQR-DEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 361 ~~~i~~a~-~~~~vl~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
.++++++. .|+++++||.. +..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|++
T Consensus 320 ~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~ 389 (462)
T 3etf_A 320 HQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAITVAKDAAHALALANDS 389 (462)
T ss_dssp HHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCS
T ss_pred HHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCC
Confidence 99999986 57899999974 4578999999999999999999999999999999999999999999975
No 39
>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}
Probab=100.00 E-value=7.6e-79 Score=654.55 Aligned_cols=404 Identities=17% Similarity=0.250 Sum_probs=369.6
Q ss_pred hhhhhhcccccccceeeecceeeccCCccccccccCCceEeeeCCc-chhhhhcccCCCHHHHHHHHHHHHHHhhhhcCC
Q 014164 8 AFQDFSTGAACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSAT-MAAEEKQMQRFDVEKAASLMKELRNNYNSRKTK 86 (429)
Q Consensus 8 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~t-g~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~ 86 (429)
++.++......+.++|||| +|+.+ +.+++++ ||+| |++++ .++.++.+|+++|+++|++||+.|+.+
T Consensus 520 ~~~~~~~~~~~~~~~~I~G-~~~~~--~~~~~v~--------nPa~~~~~i~-~v~~a~~~dv~~Av~aA~~A~~~W~~~ 587 (1026)
T 4f9i_A 520 HIAQVRTQLGKTYPLFING-KEVRT--NDLIPTV--------NPNKPSEVLG-QICQAGTTEVGDAIAAAKAAFPAWRDT 587 (1026)
T ss_dssp HHHHHHTTCCEEECEEETT-EEECC--SCEEEEE--------ETTEEEEEEE-EEECCCHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHhhccccccCceECC-EEecC--CCcEEEe--------CCCCCCceEE-EEeCCCHHHHHHHHHHHHHHHHhcccC
Confidence 3444555556678999999 99974 4445554 5587 77777 677999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEE
Q 014164 87 SYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEII 166 (429)
Q Consensus 87 ~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (429)
|+.+|+++|++++++|++++++|++++++|+|||+.++. .|+..+++.++|++...+++.+...... ..+..+++.
T Consensus 588 ~~~eRa~iL~~~Adll~~~~~eLa~~~~~E~GK~~~ea~-~Ev~~aid~lr~~a~~~~~~~~~~~~~~---~~g~~~~~~ 663 (1026)
T 4f9i_A 588 DPRTRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAY-ADVTEAIDFLEYYAREMIRLGQPQRVGH---APGELNHYF 663 (1026)
T ss_dssp CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHH-HHHHHHHHHHHHHHHHHHHHTSCEEECC---CTTEEEEEE
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHH-HHHHHHHHHHHHHHHHHHHhcCCccccC---CCCccceeE
Confidence 999999999999999999999999999999999999996 6999999999999999998776543221 235567889
Q ss_pred eecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh-cCCCceEEecCC-HHHHHHHHhc
Q 014164 167 SEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY-VDNSAVRVVEGA-VAETSALLEQ 244 (429)
Q Consensus 167 ~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~-~~~~~~L~~~ 244 (429)
++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++ +|+|+||+|+|+ .+.+..|++|
T Consensus 664 ~~PlGVV~~I~PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~h 743 (1026)
T 4f9i_A 664 YEPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDH 743 (1026)
T ss_dssp EEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHC
T ss_pred eecCceEEEeCCCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999999999999999 999999999994 5689999999
Q ss_pred C-CCEEEEeCChHHHHHHHHHHh------cccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEE
Q 014164 245 K-WDKILYTGSPRVGRIVMAAAA------KHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYII 317 (429)
Q Consensus 245 ~-v~~v~ftGs~~~~~~i~~~~~------~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~ 317 (429)
+ ++.|.||||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++|+| .|+||.|++++++|
T Consensus 744 p~v~~V~FTGSt~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf-~~aGQ~C~A~~rl~ 822 (1026)
T 4f9i_A 744 PDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAF-GFQGQKCSACSRVI 822 (1026)
T ss_dssp TTEEEEEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHH-GGGGCSTTCEEEEE
T ss_pred CCCCEEEeCCCHHHHHHHHHHhhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHH-hCCCCCCCCCceEE
Confidence 7 999999999999999999988 468999999999999999999999999999999999 99999999999999
Q ss_pred EeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhhcCCEEEeCCccCCC-CceEecEEEecCC
Q 014164 318 TTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEK-QLKIAPTILLDVP 395 (429)
Q Consensus 318 V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg~~~~~-g~~~~Ptvl~~~~ 395 (429)
||+++|++|+++|++.++++++|+|. +++++||+|++.+++++.++|++++..+++++||..+.. |+|++|||+.+++
T Consensus 823 V~~~i~d~f~~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G~~v~gG~~~~~~G~fv~PTvl~~v~ 902 (1026)
T 4f9i_A 823 VLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPVPAGEGYFVPMTIIGGIK 902 (1026)
T ss_dssp EEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHSEEEEECCCCSSSSCCCCCEEEESCC
T ss_pred ecHHHHHHHHHHHHHHHHhcccCCcccccCccccccCHHHHHHHHHHHHHHHhCCeEEecCCcCCCCCceecceeeecCC
Confidence 99999999999999999999999996 589999999999999999999998765599999987555 9999999999999
Q ss_pred CCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014164 396 DDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 396 ~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+++.+++||+||||++|++|+|++|||+++|++
T Consensus 903 ~~~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t 935 (1026)
T 4f9i_A 903 PEHRIAQEEIFGPVLAVMRAKDFDQAIEWANST 935 (1026)
T ss_dssp TTSGGGTSCCCSSEEEEEEESSHHHHHHHHTCS
T ss_pred CCccccCceecCcEEEEEEeCCHHHHHHHHHcC
Confidence 999999999999999999999999999999975
No 40
>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*
Probab=100.00 E-value=4.5e-78 Score=606.77 Aligned_cols=374 Identities=31% Similarity=0.533 Sum_probs=338.3
Q ss_pred eEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhh
Q 014164 46 FSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETF 125 (429)
Q Consensus 46 ~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~ 125 (429)
....+|.||++++ .++.++.+|+++++++|++||+.|+.++..+|.++|++++++|+++.++|++++++|+|||..+++
T Consensus 8 ~~~~~~~~~~~i~-~v~~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~ 86 (457)
T 3lns_A 8 HHHSSGHIDDDDK-HMNYLSPAKIDSLFSAQKAYFATRATADVGFRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVD 86 (457)
T ss_dssp ----------------CCCCHHHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHH
T ss_pred ccccCCCCCCeee-ecCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHH
Confidence 4556669999999 788999999999999999999999999999999999999999999999999999999999999997
Q ss_pred HhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCC
Q 014164 126 ISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPS 205 (429)
Q Consensus 126 ~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps 205 (429)
..|+..+++.++++++.+++|.++..........+...++.++|+|||++|+|||||+...++++++||++||+||+|||
T Consensus 87 ~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps 166 (457)
T 3lns_A 87 LAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPS 166 (457)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEECCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeecceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECC
Confidence 56999999999999999999887553332222235668899999999999999999999999999999999999999999
Q ss_pred CCChHHHHHHHHHHhhhcCCCceEEecCCHHHHHHHHhcCCCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEc
Q 014164 206 EIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD 285 (429)
Q Consensus 206 ~~~~~~~~~l~~~l~~alP~~~v~~v~~~~~~~~~L~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~ 285 (429)
+.+|+++.++++++.+++|+|+||+++|+.+.+..|+++++|.|.||||+.+|+.|.+.++++++|+++|+|||||+||+
T Consensus 167 ~~tp~t~~~l~~l~~~alP~gvv~vv~g~~~~~~~L~~~~vd~V~fTGS~~~G~~i~~~aa~~l~pv~lElGGk~p~iV~ 246 (457)
T 3lns_A 167 ETTPETSAVIEKIIAEAFAPEYVAVIQGGRDENSHLLSLPFDFIFFTGSPNVGKVVMQAAAKHLTPVVLELGGKCPLIVL 246 (457)
T ss_dssp TTCHHHHHHHHHHHHHHCCTTTEEECCCCHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCEEEEEC
T ss_pred CCChHHHHHHHHHHHHhCCHhhEEEecCCHHHHHHHhcCCCCEEEEECCHHHHHHHHHHHhhccCceEEECCCCCCCeEC
Confidence 99999999999999999999999999998888999998669999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHH
Q 014164 286 STINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLD 365 (429)
Q Consensus 286 ~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~ 365 (429)
+|||++.|++.+++++| +|+||.|+++++||||+++|++|+++|++++++++ |.+. ++||++++.+++++.++++
T Consensus 247 ~dADl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~---p~~~-~~gpli~~~~~~rv~~~i~ 321 (457)
T 3lns_A 247 PDADLDQTVNQLMFGKF-INSGQTXIAPDYLYVHYSVKDALLERLVERVKTEL---PEIN-STGKLVTERQVQRLVSLLE 321 (457)
T ss_dssp TTCCHHHHHHHHHHHHH-GGGGCCTTSEEEEEEEGGGHHHHHHHHHHHHHHHC---CSTT-TTCCCSSHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHH-HhCCCCccCCceEEEcHHHHHHHHHHHHHHHHhcC---CCcc-cccCCCCHHHHHHHHHHHH
Confidence 99999999999999999 99999999999999999999999999999999987 5545 9999999999999999999
Q ss_pred hhhcCCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHh
Q 014164 366 EDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKA 427 (429)
Q Consensus 366 ~a~~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~ 427 (429)
++. +++++||..+..|+|++|||+.+++++|++++||+||||++|++|+|++|||+++|+
T Consensus 322 ~a~--~~~~~gg~~~~~g~~~~Ptvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~ 381 (457)
T 3lns_A 322 ATQ--GQVLVGSQADVSKRALSATVVDGVEWNDPLMSEELFGPILPVLEFDSVRTAIDQVNK 381 (457)
T ss_dssp HCC--SEEEECCCEEGGGTEECCEEEESCCTTSGGGSSCCCSSEEEEEEESCHHHHHHHHHH
T ss_pred hcC--CeEEeCCccCCCCceeCCEEEecCCCCChhhcCcccCcEEEEEEeCCHHHHHHHHHc
Confidence 763 699999987667999999999999999999999999999999999999999999998
No 41
>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}
Probab=100.00 E-value=1.9e-78 Score=612.09 Aligned_cols=377 Identities=25% Similarity=0.315 Sum_probs=348.8
Q ss_pred ceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhh
Q 014164 45 SFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124 (429)
Q Consensus 45 ~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 124 (429)
++.++||+||++++ .++.++.+|+++||++|++||+.|+++++.+|.++|++++++|++++++|++++++|+||+....
T Consensus 7 t~~v~nP~tg~~~~-~~~~~~~~~v~~av~~A~~A~~~W~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~ 85 (474)
T 4h7n_A 7 TIEVRNPRTGKFDY-VIIPPPPRLLAQQCNRARRAQSRWQELGVEGRITTLQQWKQAILSRREQLTEALVNDTGRLSITV 85 (474)
T ss_dssp CEEEECTTTCSEEE-EECCCCHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSHHHH
T ss_pred EEeeECCCCCCEEE-EEcCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHH
Confidence 35555559999998 67799999999999999999999999999999999999999999999999999999999986443
Q ss_pred hHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecC
Q 014164 125 FISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKP 204 (429)
Q Consensus 125 ~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kp 204 (429)
.|+..+++.+++++....++......... .+....+..++|+|||++|+|||||+...++++++||++||+||+||
T Consensus 86 --~ev~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~GVv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKp 161 (474)
T 4h7n_A 86 --LEIDSFLASIDRWCGLAPELLQTSAKNTS--IPFIALQQSLVPYPLVGVISPWNFPLTLSMIDTIPALLAGCAVVVKP 161 (474)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHCCEEEECS--STTEEEEEEEEECSEEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEE
T ss_pred --HHHHHHHHHHHHHHhhhhhcccccccCCC--CCCccceEEEEeccEEEEECCCCcHHHHHhcccCcchhcCCceeecc
Confidence 59999999999999988887765543221 22344567889999999999999999999999999999999999999
Q ss_pred CCCChHHHHHHHHHHhhh-cCCCceEEecCCHHHHHHHHhcCCCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEE
Q 014164 205 SEIAPATSSLLAKLLEDY-VDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAV 283 (429)
Q Consensus 205 s~~~~~~~~~l~~~l~~a-lP~~~v~~v~~~~~~~~~L~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~i 283 (429)
|+.+|.++..+.+++.++ +|+|++++++|+.+.+..|+.| ++.|.||||+.+|+.|.+.++++++|+++|+|||||+|
T Consensus 162 s~~tp~~~~~l~~~~~~ag~p~gv~~~v~g~~~~~~~l~~~-v~~v~FTGS~~~G~~i~~~aa~~~~~v~lElGGk~p~i 240 (474)
T 4h7n_A 162 SEIAPRFVAPLLMALNTVPELRDVLIFVEGGGETGANLINY-VDFVCFTGSVATGREVAETAARRFIPAYLELGGKDPAI 240 (474)
T ss_dssp CTTSCTTHHHHHHHHTTCTTTTTTEEECCCCHHHHHHHHTT-CSEEEEESCHHHHHHHHHHHHHHTCCEEEECCCCEEEE
T ss_pred cccCchHHHHHHhhhhhhcccccceeeccccchhhhhhhhc-cceEEeccccchhhhhhhhhhcccccccccCCCcCccc
Confidence 999999999999999999 9999999999998999999976 99999999999999999999999999999999999999
Q ss_pred EcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHh
Q 014164 284 VDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLAS 362 (429)
Q Consensus 284 V~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~ 362 (429)
|++|||++.+++.+++++| +|+||.|++++|+|||+++|++|+++++++++++++|+|. +++++||++++.+.+++.+
T Consensus 241 V~~dAdl~~aa~~i~~~~~-~n~GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~ 319 (474)
T 4h7n_A 241 VLESANLELATSAILWGAV-VNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIIND 319 (474)
T ss_dssp ECTTSCHHHHHHHHHHHHH-GGGGCSTTCEEEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHH
T ss_pred cCchhhHHHHHHHHHhhhc-cCCCCceeecccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHH
Confidence 9999999999999999999 9999999999999999999999999999999999999997 5889999999999999999
Q ss_pred HHHhhh-cCCEEEeCCccC--CCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014164 363 LLDEDK-VSDKIVYGGQRD--EKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 363 ~i~~a~-~~~~vl~gg~~~--~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+++++. .+++++.||..+ ..|+|++|||+.+++++|++++||+||||++|++|+|.||||+++|++
T Consensus 320 ~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~ 388 (474)
T 4h7n_A 320 HILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDT 388 (474)
T ss_dssp HHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCS
T ss_pred HHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccccCcEEEEEEECCHHHHHHHHHcC
Confidence 999986 577888998763 468999999999999999999999999999999999999999999975
No 42
>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*
Probab=100.00 E-value=3.9e-77 Score=600.34 Aligned_cols=360 Identities=42% Similarity=0.726 Sum_probs=334.5
Q ss_pred CCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHH
Q 014164 63 RFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKE 142 (429)
Q Consensus 63 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~ 142 (429)
..+.+|+++|+++|++||+.|+.+++.+|.++|++++++|+++.++|++++++|+|||..+++..|+..+++.+++++..
T Consensus 14 ~~s~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~ 93 (469)
T 3sza_A 14 GSHMSKISEAVKRARAAFSSGRTRPLQFRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQK 93 (469)
T ss_dssp ----CHHHHHHHHHHHHHHTTTTCSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 46777999999999999999999999999999999999999999999999999999999999767999999999999999
Q ss_pred HHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh
Q 014164 143 LKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY 222 (429)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a 222 (429)
+++|..+..........+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++++++.++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~a 173 (469)
T 3sza_A 94 LPEWAADEPVEKTPQTQQDELYIHSEPLGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY 173 (469)
T ss_dssp HHHHHSCEECCCCGGGTTSEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred HHhhhcccccCccccCCCccceeeccCCCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh
Confidence 99888655433222223456789999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCceEEecCCHHHHHHHHhcCCCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHH
Q 014164 223 VDNSAVRVVEGAVAETSALLEQKWDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKW 302 (429)
Q Consensus 223 lP~~~v~~v~~~~~~~~~L~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~ 302 (429)
+|+|++|+++|+.+.+..|+.|++|.|.||||+.+|+.|.+.++++++|+++|+|||||+||++|||++.|++.+++++|
T Consensus 174 lP~gvv~vv~g~~~~~~~ll~~~vd~I~FTGS~~vG~~i~~~aa~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~ 253 (469)
T 3sza_A 174 LDKDLYPVINGGVPETTELLKERFDHILYTGSTGVGKIIMTAAAKHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKF 253 (469)
T ss_dssp SCTTTSCBCCCSHHHHHHHTTSCCSEEEEESCHHHHHHHHHHHHTTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHHHH
T ss_pred CCcceEEEEECCHHHHHHHHhcCCCEEEEECCHHHHHHHHHHHhhccCceEEecCCCCceEECCCCCHHHHHHHHHHHHH
Confidence 99999999999877788888888999999999999999999999999999999999999999999999999999999999
Q ss_pred HhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCC-CCCCcccccCCHHHHHHHHhHHHhhhcCCEEEeCCccCC
Q 014164 303 MANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNP-MESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDE 381 (429)
Q Consensus 303 ~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~-~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg~~~~ 381 (429)
.|+||.|++++|||||+++|++|+++|+++++++. |+| ++++++||++++.+++++.++| .|+++++||..+.
T Consensus 254 -~n~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~rv~~~i----~ga~v~~GG~~~~ 327 (469)
T 3sza_A 254 -MNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFY-GEDAKKSRDYGRIISARHFQRVMGLI----EGQKVAYGGTGDA 327 (469)
T ss_dssp -GGGGCCTTSCCEEEECGGGHHHHHHHHHHHHHHHH-CSCGGGCTTCCCCSCHHHHHHHHHHH----TTSEEEECCCEET
T ss_pred -hcCCCCCCCCcEEEEehhHHHHHHHHHHHHHHHhc-CCCCcccCcccccCCHHHHHHHHHHH----cCCEEEeCCccCC
Confidence 99999999999999999999999999999999986 555 5789999999999999999998 4789999998766
Q ss_pred CCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014164 382 KQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 382 ~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
.|+|++|||+.+++++|++++||+||||++|++|+|+||||+++|++
T Consensus 328 ~g~~~~PTvl~~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~ 374 (469)
T 3sza_A 328 ATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQR 374 (469)
T ss_dssp TTTEECCEEEESCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHS
T ss_pred CCceeCCeeecCCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcC
Confidence 79999999999999999999999999999999999999999999985
No 43
>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*
Probab=100.00 E-value=1e-76 Score=607.39 Aligned_cols=392 Identities=15% Similarity=0.207 Sum_probs=346.9
Q ss_pred cceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHH-hhhhcCCCHHHHHHHHHHH
Q 014164 20 NKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNN-YNSRKTKSYEWRMSQIQSI 98 (429)
Q Consensus 20 ~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A-~~~w~~~~~~~R~~~L~~~ 98 (429)
.++|||| +|+.+.+ .+++++|| +||++++ .++.++ +|+++|+++|++| |+.|+.+++.+|.++|+++
T Consensus 8 ~~~~i~G-~~~~~~~-~~~~v~nP--------~tg~~i~-~~~~~~-~dv~~Av~aA~~A~~~~w~~~~~~~R~~~L~~~ 75 (534)
T 2y53_A 8 LKNHVAG-QWIAGTG-AGITLTDP--------VTGVALV-RVSSEG-LDLARAFSFAREDGGAALRALTYAQRAARLADI 75 (534)
T ss_dssp CCEEETT-EEECCSS-SCEEEECT--------TTCCEEE-EECCTT-CCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred hhhEECC-EEecCCC-CeEEEECC--------CCCCEEE-EEeCCH-HHHHHHHHHHHHHhhhhhhhCCHHHHHHHHHHH
Confidence 4689999 9998755 24555555 9999888 555777 8999999999999 5999999999999999999
Q ss_pred HHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHhhcCCCcc---c-ccccCCCC-cceEEeecc-eE
Q 014164 99 ANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKYWTKPEKA---K-TSLTTYPS-SAEIISEPL-GV 172 (429)
Q Consensus 99 a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~---~-~~~~~~~~-~~~~~~~P~-Gv 172 (429)
+++|++++++|++++++|+|||+.++. .|+..+++.++|++...+++.+.... . .+....+. ..+..++|+ ||
T Consensus 76 a~~l~~~~~ela~~~~~e~Gk~~~ea~-~ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~P~~GV 154 (534)
T 2y53_A 76 VKLLQAKRGDYYAIATANSGTTRNDSA-VDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHVLSPTRGV 154 (534)
T ss_dssp HHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEEEEEECSSC
T ss_pred HHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceEEEecCCCE
Confidence 999999999999999999999999997 59999999999999988765432110 0 01111111 357889997 99
Q ss_pred EEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhh--cCCCceEEecCCHHHHHHHHhc--CCCE
Q 014164 173 VLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDY--VDNSAVRVVEGAVAETSALLEQ--KWDK 248 (429)
Q Consensus 173 v~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~a--lP~~~v~~v~~~~~~~~~L~~~--~v~~ 248 (429)
|++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++ +|+|+||+|+|+.. .+.++ .+|.
T Consensus 155 v~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~---~l~~~l~~vd~ 231 (534)
T 2y53_A 155 ALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSA---GLLDQIRSFDV 231 (534)
T ss_dssp EEEECCTTCTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCT---TSGGGCCTTCE
T ss_pred EEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChH---HHHhcccccCE
Confidence 99999999999999999999999999999999999999999999999997 59999999998532 24444 3899
Q ss_pred EEEeCChHHHHHHHHHHh--cccCceeeecCCCCcEEEcCCC-----CHHHHHHHHHHHHHHhcCCCccccccEEEEeCC
Q 014164 249 ILYTGSPRVGRIVMAAAA--KHLTPVILELGGKSPAVVDSTI-----NLQVTTRRIIAGKWMANNGQACIGVDYIITTKD 321 (429)
Q Consensus 249 v~ftGs~~~~~~i~~~~~--~~~~~~~~e~~G~~~~iV~~da-----dl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~ 321 (429)
|.||||+.+|+.|.+.++ ++++|+++|+|||||+||++|| |++.|++.+++++| +|+||.|++++|||||++
T Consensus 232 V~FTGS~~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~ 310 (534)
T 2y53_A 232 VSFTGSADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMT-VKSGQKCTAIRRAFVPEA 310 (534)
T ss_dssp EEEESCHHHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHH-GGGGCCTTSEEEEEEEGG
T ss_pred EEEECCHHHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHH-hCCCCcccCCCEEEEecc
Confidence 999999999999998875 7899999999999999999999 99999999999999 999999999999999999
Q ss_pred chHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhhcCCEEEeCCccC-------CCCceEecEEEec
Q 014164 322 FAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRD-------EKQLKIAPTILLD 393 (429)
Q Consensus 322 ~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg~~~-------~~g~~~~Ptvl~~ 393 (429)
+|++|+++|+++++++++|+|. +++++||++++.+++++.++|+++..|+++++||... ..|+|++|||+.+
T Consensus 311 i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~ga~~~~GG~~~~~~~~~~~~g~~~~PTvl~~ 390 (534)
T 2y53_A 311 ALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAPHLFVV 390 (534)
T ss_dssp GHHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHHHTSSEEEEECTTSCCBSCCTTTSCCCCCEEEEC
T ss_pred HHHHHHHHHHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHHHcCCEEEECCcccccccccCCCCceecCEEEEe
Confidence 9999999999999999999996 5899999999999999999999987788999998642 3589999999999
Q ss_pred CCCC--CCccccCccccceeeEecC---CH-----HHHHHHHHhh
Q 014164 394 VPDD--STIMKEEIFGPLLPIVTVS---IV-----SSAHFKLKAC 428 (429)
Q Consensus 394 ~~~~--~~~~~~E~fgPv~~v~~~~---~~-----~eai~l~n~~ 428 (429)
++++ |.+++||+||||++|++|+ |. +|||+++|++
T Consensus 391 v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~ 435 (534)
T 2y53_A 391 NDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRG 435 (534)
T ss_dssp SCGGGCSSTTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTT
T ss_pred cCccccCHHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCC
Confidence 9877 6899999999999999999 99 9999999985
No 44
>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}
Probab=100.00 E-value=6.3e-76 Score=600.80 Aligned_cols=388 Identities=17% Similarity=0.201 Sum_probs=348.7
Q ss_pred cccccceeeecceeeccCCccccccccCCceEeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHH
Q 014164 16 AACLNKSFIYNYTYRKNQTHISFPYLSLTSFSCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQI 95 (429)
Q Consensus 16 ~~~~~~~~i~g~~~~~~~~~~~~~~~~p~~~~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L 95 (429)
.....++|||| +|+.+.+ +.||+||++++..++.++.+|+++|+++|++||+.|+.++..+|.++|
T Consensus 26 ~~~~~~~~I~G-~~~~~~~-------------v~nP~tg~~i~~~~~~~~~~dv~~av~~A~~A~~~w~~~~~~~R~~~L 91 (528)
T 3v4c_A 26 FTPKGKHLVAG-EWLDGAG-------------TFASAPAHGPAHDFAVGTVELVNRACEAAEEAFWTYGYSSRKERAAFL 91 (528)
T ss_dssp CCCCCCEEETT-EEECCSS-------------EEECCCSSSCCCEEECCCHHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred cccccCceECC-EEecCCC-------------ccCCCCCCEeeeEeCCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHH
Confidence 46667899999 9998732 456699999985677999999999999999999999999999999999
Q ss_pred HHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHHHHh--hcCCCcccc-cc--cCCCCcceEEeecc
Q 014164 96 QSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKELKY--WTKPEKAKT-SL--TTYPSSAEIISEPL 170 (429)
Q Consensus 96 ~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~~~~--~~~~~~~~~-~~--~~~~~~~~~~~~P~ 170 (429)
++++++|++++++|++++++|+|||+.+++ .|+..+++.++|+++.+++ |.+...... +. ...+...++.++|+
T Consensus 92 ~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~-~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~ 170 (528)
T 3v4c_A 92 RAIADEIEARAEAITEIGSQETGLPEARLN-GERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLVQRPV 170 (528)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHCCCHHHHH-HHHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEEEEEEEC
T ss_pred HHHHHHHHHhHHHHHHHHHHHhCCCHHHHH-HHHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcceeEeeCC
Confidence 999999999999999999999999999996 6999999999999999987 444332111 00 01234568899999
Q ss_pred eEEEEEcCCchhhhhhh--hHHHHHHhcCCeEEecCCCCChHHHHHHHHHHh----hh-cCCCceEEecC-CHHHHHHHH
Q 014164 171 GVVLVISTWNYPFLLSL--DPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLE----DY-VDNSAVRVVEG-AVAETSALL 242 (429)
Q Consensus 171 Gvv~~i~p~n~P~~~~~--~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~----~a-lP~~~v~~v~~-~~~~~~~L~ 242 (429)
|||++|+|||||+...+ +++++||++||+||+|||+.+|+++.++++++. ++ +|+|+||+|+| +.+.+..|+
T Consensus 171 GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~~g~~L~ 250 (528)
T 3v4c_A 171 GPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRDVGHALV 250 (528)
T ss_dssp SCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHHHHHHHH
T ss_pred cEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHHHHHHHH
Confidence 99999999999999865 899999999999999999999999999998765 46 99999999999 568899999
Q ss_pred hcC-CCEEEEeCChHHHHHHHHHHhccc--CceeeecCCCCcEEEcCCC---CHHHHHHHHHHHHHHhcCCCccccccEE
Q 014164 243 EQK-WDKILYTGSPRVGRIVMAAAAKHL--TPVILELGGKSPAVVDSTI---NLQVTTRRIIAGKWMANNGQACIGVDYI 316 (429)
Q Consensus 243 ~~~-v~~v~ftGs~~~~~~i~~~~~~~~--~~~~~e~~G~~~~iV~~da---dl~~aa~~i~~~~~~~~~Gq~C~~~~~v 316 (429)
+|+ ||.|.||||+.+|+.|.+.+++++ +|+++|+|||||+||++|| |++.|++.+++++| +|+||.|++++||
T Consensus 251 ~~p~v~~V~fTGS~~~G~~i~~~aa~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~-~n~GQ~C~a~~rv 329 (528)
T 3v4c_A 251 QHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLT-MGAGQFCTNPGIA 329 (528)
T ss_dssp HCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHH-GGGGCCTTCCCEE
T ss_pred hCCCCCEEEEECChHHHHHHHHHHhhccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHH-hcCCCccccCcEE
Confidence 997 999999999999999999999998 9999999999999999999 88999999999999 9999999999999
Q ss_pred EEeCC-chHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhhcCCEEEeCCccCCCCceEecEEEecCC
Q 014164 317 ITTKD-FAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKVSDKIVYGGQRDEKQLKIAPTILLDVP 395 (429)
Q Consensus 317 ~V~~~-~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl~gg~~~~~g~~~~Ptvl~~~~ 395 (429)
|||++ +|++|+++|++++++++.+ +.+||++++.+.+++.++++ ..|+++++||.. .|+|++|||+.+++
T Consensus 330 lV~~~~i~d~f~~~l~~~~~~~~~~-----~~~gp~~~~~~~~~v~~~~~--~~Ga~v~~gG~~--~g~~~~PTvl~~~~ 400 (528)
T 3v4c_A 330 VVIEGADADRFTTAAVEALAKVAPQ-----TMLTDGIAKAYRDGQARFAT--RNAVKPLLATES--SGRDASPNLFETTG 400 (528)
T ss_dssp EEESSHHHHHHHHHHHHHHHTCCCE-----ECSCHHHHHHHHHHHHHHHT--CTTCEEEECCCC--CTTEECCEEEEEEH
T ss_pred EEecccHHHHHHHHHHHHHHhcccC-----CCCCHHHHHHHHHHHHHHHH--hCCCEEEeCCCc--CCceeccEEEEecC
Confidence 99998 9999999999999988654 67999998888888888775 467899999975 69999999999887
Q ss_pred CC---CCccccCccccceeeEecCCHHHHHHHHHhh
Q 014164 396 DD---STIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 396 ~~---~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
++ |.+++||+||||++|++|+|+||||+++|++
T Consensus 401 ~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~ 436 (528)
T 3v4c_A 401 AQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGF 436 (528)
T ss_dssp HHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHC
T ss_pred cccccChhhcccccCCeEEEEecCCHHHHHHHHhcC
Confidence 77 8999999999999999999999999999985
No 45
>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*
Probab=100.00 E-value=2e-73 Score=580.00 Aligned_cols=368 Identities=18% Similarity=0.215 Sum_probs=331.4
Q ss_pred eEeeeCCcchhh-hhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhh
Q 014164 46 FSCRCSATMAAE-EKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFET 124 (429)
Q Consensus 46 ~~~~~p~tg~~~-~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a 124 (429)
+.+.||+||+++ + .++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|++++++|++++++|+|||..++
T Consensus 9 ~~~~nP~tg~~i~~-~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a 87 (510)
T 1ez0_A 9 FYATNAFTGEALPL-AFPVHTEVEVNQAATAAAKVARDFRRLNNSKRASLLRTIASELEARSDDIIARAHLETALPEVRL 87 (510)
T ss_dssp EEEECTTTSSEEEE-EEECCCHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH
T ss_pred EEeECCCCCCEEEE-EECCCCHHHHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHH
Confidence 445555999999 6 67799999999999999999999999999999999999999999999999999999999999988
Q ss_pred hHhhHHHHHHHHHHHHHHHHh--hcCCCcccc-cccCC-C-CcceEEeecceEEEEEcCCchhhhhh--hhHHHHHHhcC
Q 014164 125 FISEISMTKSSCKLALKELKY--WTKPEKAKT-SLTTY-P-SSAEIISEPLGVVLVISTWNYPFLLS--LDPVIGAIAAG 197 (429)
Q Consensus 125 ~~~ev~~a~~~l~~~~~~~~~--~~~~~~~~~-~~~~~-~-~~~~~~~~P~Gvv~~i~p~n~P~~~~--~~~~~~ALaaG 197 (429)
. .|+..+++.++|+++.+++ |.+...... +...+ + ...++.++|+|||++|+|||||+... .+++++||++|
T Consensus 88 ~-~Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALaaG 166 (510)
T 1ez0_A 88 T-GEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQQIALGPVAVFGASNFPLAFSAAGGDTASALAAG 166 (510)
T ss_dssp H-HHHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEEEEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHT
T ss_pred H-HHHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCceEEEecCcEEEEECCccchhhhhhhHHHHHHHHHcC
Confidence 5 6999999999999999986 654332110 00001 1 23578999999999999999999985 49999999999
Q ss_pred CeEEecCCCCChHHHHHHHHHHh----hh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhccc-
Q 014164 198 NAVVLKPSEIAPATSSLLAKLLE----DY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHL- 269 (429)
Q Consensus 198 N~vV~kps~~~~~~~~~l~~~l~----~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~- 269 (429)
|+||+|||+.+|+++.++++++. ++ +|+|++|+++| +.+.++.|++|+ ||.|.||||+.+|+.|.+.+++++
T Consensus 167 N~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa~~l~ 246 (510)
T 1ez0_A 167 CPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPE 246 (510)
T ss_dssp CCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSS
T ss_pred CEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHcCCCCCEEEEeCcHHHHHHHHHHhhccCC
Confidence 99999999999999999999984 45 89999999999 677899999997 999999999999999999999886
Q ss_pred -CceeeecCCCCcEEEcCCCCHH--HHHHHHHHHHHHhcCCCccccccEEEEeCC-chHHHHHHHHHHHhhhhCCCCCCC
Q 014164 270 -TPVILELGGKSPAVVDSTINLQ--VTTRRIIAGKWMANNGQACIGVDYIITTKD-FAPKLIDSLRNELKEFFGKNPMES 345 (429)
Q Consensus 270 -~~~~~e~~G~~~~iV~~dadl~--~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~-~~~~f~~~l~~~~~~~~~g~~~~~ 345 (429)
+|+++|+|||||+||++|||++ .+++.+++++| +|+||.|++++|||||++ +|++|+++|++++++++.
T Consensus 247 ~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~-~n~GQ~C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~------ 319 (510)
T 1ez0_A 247 PIPFYGELGAINPTFIFPSAMRAKADLADQFVASMT-MGCGQFCTKPGVVFALNTPETQAFIETAQSLIRQQSP------ 319 (510)
T ss_dssp CCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHT-GGGGCCTTCCCEEEEESSHHHHHHHHHHHHHHHHCCC------
T ss_pred CccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHH-cCCCCCcCCCCEEEEeCCccHHHHHHHHHHHHHhcCC------
Confidence 9999999999999999999999 99999999999 999999999999999999 999999999999998853
Q ss_pred CcccccCCHHHHHHHHhHHHhhh--cCCEEEeCCccCCCCceEecEEEecCCCC---CCccccCccccceeeEecCCHHH
Q 014164 346 KDLSRIVNPFHFARLASLLDEDK--VSDKIVYGGQRDEKQLKIAPTILLDVPDD---STIMKEEIFGPLLPIVTVSIVSS 420 (429)
Q Consensus 346 ~~~gpl~~~~~~~~~~~~i~~a~--~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~---~~~~~~E~fgPv~~v~~~~~~~e 420 (429)
||++++.+.+++.++++++. .|+++++||. .|+|++|||+.+++++ |.+++||+||||++|++|+|.+|
T Consensus 320 ---gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~---~g~~~~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~de 393 (510)
T 1ez0_A 320 ---STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA---ESPCVASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVAD 393 (510)
T ss_dssp ---BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC---CTTSBCCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHH
T ss_pred ---CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC---CCCEecCEEEEecCCccccCHHHcCCccCCeEEEEEeCCHHH
Confidence 67888888889999998876 3679999987 3999999999887777 99999999999999999999999
Q ss_pred HHHHHHhh
Q 014164 421 AHFKLKAC 428 (429)
Q Consensus 421 ai~l~n~~ 428 (429)
||+++|++
T Consensus 394 ai~~aN~~ 401 (510)
T 1ez0_A 394 MLSLSEML 401 (510)
T ss_dssp HHHHHHTC
T ss_pred HHHHHhcC
Confidence 99999975
No 46
>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}
Probab=100.00 E-value=1.2e-70 Score=589.68 Aligned_cols=361 Identities=21% Similarity=0.331 Sum_probs=335.9
Q ss_pred ccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHH
Q 014164 61 MQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLAL 140 (429)
Q Consensus 61 ~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~ 140 (429)
++.++.+|+++|+++|++||+.|+.+++.+|.++|++++++|+++.++|++++++|+|||+.++. .|+..+++.++|++
T Consensus 544 v~~a~~~dv~~Av~aA~~A~~~W~~~~~~eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~-~Ev~~ai~~lr~~a 622 (1001)
T 3haz_A 544 IADATPDQAHAAVAAARAGFAGWSRTPAGIRAAALEQAAHLLESRSAHFIALLQREGGKTLDDAL-SELREAADFCRYYA 622 (1001)
T ss_dssp CCCCCHHHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHH-HHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHH-HHHHHHHHHHHHHH
Confidence 55899999999999999999999999999999999999999999999999999999999999996 79999999999999
Q ss_pred HHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHh
Q 014164 141 KELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLE 220 (429)
Q Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~ 220 (429)
...+++.+..... ....+...++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.
T Consensus 623 ~~a~~~~g~~~~~--~~~~g~~~~~~~~P~GVV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~ 700 (1001)
T 3haz_A 623 AQGRKLFGSETAM--PGPTGESNALTMRGRGVFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLH 700 (1001)
T ss_dssp HHHHHHHSSCEEC--CCCTTEEEEEEEEECSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHH
T ss_pred HHHHhhcCccccc--cCCCCCceEEEEeCCcEEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHH
Confidence 9998876543211 11235567889999999999999999999999999999999999999999999999999999999
Q ss_pred hh-cCCCceEEecCCHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcc---cCceeeecCCCCcEEEcCCCCHHHHHH
Q 014164 221 DY-VDNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKH---LTPVILELGGKSPAVVDSTINLQVTTR 295 (429)
Q Consensus 221 ~a-lP~~~v~~v~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~---~~~~~~e~~G~~~~iV~~dadl~~aa~ 295 (429)
++ +|+|+||+|+|+.+.+..|++|+ |+.|.||||+.+|+.|.+.++++ ++|+++|+|||||+||++|||++.|++
T Consensus 701 eAGlP~gvv~vV~G~g~~g~~L~~~p~Vd~V~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~ 780 (1001)
T 3haz_A 701 EAGIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVAD 780 (1001)
T ss_dssp HHTCCTTTEEECCCCHHHHHHHHHCTTCCEEEEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHH
T ss_pred HhCcCcCcEEEEecCchHHHHHHhCCCcCEEEecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHH
Confidence 99 99999999999655599999997 99999999999999999998864 899999999999999999999999999
Q ss_pred HHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCC-CCCcccccCCHHHHHHHHhHHHhhhcCCEEE
Q 014164 296 RIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPM-ESKDLSRIVNPFHFARLASLLDEDKVSDKIV 374 (429)
Q Consensus 296 ~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~-~~~~~gpl~~~~~~~~~~~~i~~a~~~~~vl 374 (429)
.+++|+| .|+||.|+++++||||++++++|+++|++.++++++|+|. +++++||+++..+.+++.++|+++..++++
T Consensus 781 ~iv~s~f-~naGQ~C~A~~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g~v- 858 (1001)
T 3haz_A 781 DVVTSAF-RSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEARL- 858 (1001)
T ss_dssp HHHHHHH-GGGGCSTTCEEEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHSEE-
T ss_pred HHHHHHH-hCCCCCCCCCceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcCeE-
Confidence 9999999 9999999999999999999999999999999999999996 689999999999999999999998766688
Q ss_pred eCCccCCCCceEecEEEecCCCCCCccccCccccceeeEecCC--HHHHHHHHHhh
Q 014164 375 YGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSI--VSSAHFKLKAC 428 (429)
Q Consensus 375 ~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~--~~eai~l~n~~ 428 (429)
+||..+..|+|++|||+.+ +++.+++||+||||++|++|++ ++|||+++|++
T Consensus 859 ~gg~~~~~G~fv~PTvl~~--~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t 912 (1001)
T 3haz_A 859 HFAGPAPEGCFVAPHIFEL--TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERT 912 (1001)
T ss_dssp EEECCCCSSSCCCCEEEEC--SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHT
T ss_pred eccccCCCCcEEeeEEecC--CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcC
Confidence 8888766799999999975 6788999999999999999996 79999999985
No 47
>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}
Probab=100.00 E-value=1.4e-64 Score=508.01 Aligned_cols=339 Identities=16% Similarity=0.172 Sum_probs=291.8
Q ss_pred cCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHH
Q 014164 62 QRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALK 141 (429)
Q Consensus 62 ~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~ 141 (429)
+.++.+|+++++++|++||+.|+.+++++|.++|+++++.|++++++|++++++|+||+..+++..++..+++.+..
T Consensus 2 ~~a~~~~v~~av~~A~~A~~~w~~~~~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~--- 78 (452)
T 3my7_A 2 PVTNMAELDAMIARVKKAQEEFATYSQEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYN--- 78 (452)
T ss_dssp CCSSHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH---
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHH---
Confidence 47899999999999999999999999999999999999999999999999999999999999875566666665521
Q ss_pred HHHhhcCCCcc-cccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHh
Q 014164 142 ELKYWTKPEKA-KTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLE 220 (429)
Q Consensus 142 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~ 220 (429)
++..... .......+...+..++|+||+++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.
T Consensus 79 ----~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~ 154 (452)
T 3my7_A 79 ----KYKDEQTCGILEEDDNLGTMTIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVL 154 (452)
T ss_dssp ----HHTTCCCSEEC-------CEEEEEECCEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHH
T ss_pred ----HhhhccccccccCCCCCceEEEecCceEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHH
Confidence 1111111 11111223456889999999999999999999999999999999999999999999999999888876
Q ss_pred ----hh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHH
Q 014164 221 ----DY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVT 293 (429)
Q Consensus 221 ----~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~a 293 (429)
++ +|+|++|+++| +.+.++.|++|+ ++.|.||||+..+ +.++.+++|+++|+|||||+||++|||++.|
T Consensus 155 ~a~~~aG~P~gvv~~v~g~~~~~~~~L~~~p~v~~V~fTGs~~~~----~~a~~~~kp~~~e~gG~~p~iV~~dADl~~A 230 (452)
T 3my7_A 155 DAAVAAGAPKDIIGWIDQPSVELSNALMKHDDIALILATGGPGMV----KAAYSSGKPAIGVGAGNVPVVIDETADIKRA 230 (452)
T ss_dssp HHHHHTTCCTTSEEECSSCCHHHHHHHHHCTTCCEEEECSCHHHH----HHHHTSSSCEEECC--CEEEEECTTSCHHHH
T ss_pred HHHHHcCCCcCcEEEEcCCCHHHHHHHHhCCCccEEEEECcHHHH----HHHHhcCCCEEecCCCCCeEEEeCCCCHHHH
Confidence 56 99999999999 678999999997 9999999999854 4566788999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHHhhhc-CCE
Q 014164 294 TRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLDEDKV-SDK 372 (429)
Q Consensus 294 a~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~~~ 372 (429)
++.+++++| +++||.|+++++||||+++|++|+++|+++ .||++++.+.+++.++++++.. +++
T Consensus 231 a~~iv~s~~-~~~GQ~C~a~~rv~V~~~i~d~f~~~l~~~--------------~gpli~~~~~~~v~~~i~~~~~~~a~ 295 (452)
T 3my7_A 231 VASVLMSKT-FDNGVVCASEQAVIVVDEVYDEVKERFASH--------------KAHVLSKTDADKVRKVLLIDGALNAK 295 (452)
T ss_dssp HHHHHHGGG-GGGGCCTTCEEEEEEEGGGHHHHHHHHHTT--------------TEEECCHHHHHHHHHHHEETTEECGG
T ss_pred HHHHHHHHh-CCCCCccCCCcEEEEcHHHHHHHHHHHHHh--------------CCCcCCHHHHHHHHHHHHhhcccCCe
Confidence 999999999 999999999999999999999999999875 4899999999999999986543 445
Q ss_pred EEeCCccC----CCCceEecEE-------EecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014164 373 IVYGGQRD----EKQLKIAPTI-------LLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 373 vl~gg~~~----~~g~~~~Ptv-------l~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+ .||... ..|+|++||+ +.++++++++++ |+||||++|++|+|++|||+++|++
T Consensus 296 v-~G~~~~~~~~~~G~~v~pt~~vl~~~~~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~ 360 (452)
T 3my7_A 296 I-VGQPATAIAEMAGVKVPADTKVLIGEGLGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTM 360 (452)
T ss_dssp G-TTCCHHHHHHHHTCCCCTTCCEEEEECSSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHH
T ss_pred E-ecCccchhHHhCCceeCCCeeEEeeccccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhc
Confidence 4 576542 3589999997 668888999875 8999999999999999999999986
No 48
>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}
Probab=100.00 E-value=1.7e-62 Score=494.52 Aligned_cols=339 Identities=16% Similarity=0.184 Sum_probs=292.4
Q ss_pred CCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCchhhhHhhHHHHHHHHHHHHHH
Q 014164 63 RFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPPFETFISEISMTKSSCKLALKE 142 (429)
Q Consensus 63 ~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~a~~~l~~~~~~ 142 (429)
.++.+|+++++++|++||+.|+.+++.+|.++|+++++.|++++++|++++++|+||+..+++..+...+++.+.+
T Consensus 8 ~~~~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~---- 83 (464)
T 3k9d_A 8 LRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYN---- 83 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHH----
T ss_pred CCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHH----
Confidence 5678999999999999999999999999999999999999999999999999999999988865444444443332
Q ss_pred HHhhcCCCcc-cccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHH----
Q 014164 143 LKYWTKPEKA-KTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAK---- 217 (429)
Q Consensus 143 ~~~~~~~~~~-~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~---- 217 (429)
|+..... .......+...+..++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++
T Consensus 84 ---~~~~~~~~g~~~~~~~~~~~~~~~P~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~ 160 (464)
T 3k9d_A 84 ---YIKDMKTIGMLKEDNEKKVMEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISE 160 (464)
T ss_dssp ---HHTTCCCSEEEEEETTTTEEEEEEECCEEEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHH
T ss_pred ---hhhcccccceeccCCCceeEEEEecceEEEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHH
Confidence 2222111 11111245667889999999999999999999999999999999999999999999999998665
Q ss_pred HHhhh-cCCCceEEecC-CHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecC-CCCcEEEcCCCCHHHH
Q 014164 218 LLEDY-VDNSAVRVVEG-AVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELG-GKSPAVVDSTINLQVT 293 (429)
Q Consensus 218 ~l~~a-lP~~~v~~v~~-~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~-G~~~~iV~~dadl~~a 293 (429)
++.++ +|+|+||+|+| +.+.++.|++|+ +|.|.||||+.. .+.++.+++|+ +|+| ||+|+||++|||++.|
T Consensus 161 ~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~vd~I~fTGs~~v----~~~a~~~~kpv-lelG~G~~p~iV~~dADl~~A 235 (464)
T 3k9d_A 161 AAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAM----VKAAYSSGTPA-IGVGPGNGPAFIERSANIPRA 235 (464)
T ss_dssp HHHHTTCCTTSEEECSSCCHHHHHHHHHCTTEEEEEECSCHHH----HHHHTTSSSCE-EEBCCCCCEEEECTTSCHHHH
T ss_pred HHHHhCCCCCeEEEEeCCCHHHHHHHHhCCCCCEEEEeCChHH----HHHHHhcCCcE-EeeCCCCCeEEECCCCCHHHH
Confidence 45777 99999999999 678999999997 999999999984 56667789999 7888 9999999999999999
Q ss_pred HHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHH-------hhhhCCCCC--CCCcccccCCHHHHHHHHhHH
Q 014164 294 TRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNEL-------KEFFGKNPM--ESKDLSRIVNPFHFARLASLL 364 (429)
Q Consensus 294 a~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~-------~~~~~g~~~--~~~~~gpl~~~~~~~~~~~~i 364 (429)
++.+++++| +|+||.|+++++||||+++|++|+++|+++. +.+++|+|. +++++||+++..+++++.+++
T Consensus 236 a~~i~~~~~-~n~Gq~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~ 314 (464)
T 3k9d_A 236 VKHILDSKT-FDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLA 314 (464)
T ss_dssp HHHHHHHHT-GGGGCSTTSCCEEEEEHHHHHHHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHT
T ss_pred HHHHHHHHh-cCCCCCCCCCcEEEEeHHHHHHHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHh
Confidence 999999999 9999999999999999999999999999986 455677763 578999999999999999999
Q ss_pred Hhhh-cCCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHH----HHHHhh
Q 014164 365 DEDK-VSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAH----FKLKAC 428 (429)
Q Consensus 365 ~~a~-~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai----~l~n~~ 428 (429)
+.+. .|+++++||.. ++++++++. +|+||||++|++|+|.+||| +++|++
T Consensus 315 ~~a~~~ga~vl~gg~~-------------~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~ 369 (464)
T 3k9d_A 315 GLTVPADARVLIAEET-------------KVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHE 369 (464)
T ss_dssp TCCCCTTCCEEEEECC-------------CCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHT
T ss_pred hhhhcCCCEEEEcCCC-------------CCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcC
Confidence 9875 47799998863 456777755 89999999999999999997 688864
No 49
>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}
Probab=100.00 E-value=3.9e-63 Score=497.25 Aligned_cols=333 Identities=21% Similarity=0.181 Sum_probs=262.1
Q ss_pred EeeeCCcchhhhhcccCCCHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhc-------CC
Q 014164 47 SCRCSATMAAEEKQMQRFDVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDL-------SK 119 (429)
Q Consensus 47 ~~~~p~tg~~~~~~~~~~~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~-------Gk 119 (429)
-+.||+||++++ .++.++.+|+++|+++|++||+.|+.++..+|.++|++++++|++++++|++++++|+ ||
T Consensus 10 ~~~~P~tg~~~~-~~~~~~~~~v~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk 88 (463)
T 2h5g_A 10 GVDLGTENLYFQ-SMVKPAGPTVEQQGEMARSGGRMLATLEPEQRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAA 88 (463)
T ss_dssp --------------------CCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCH
T ss_pred CCcCCCCCCEEE-EecCCCHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCC
Confidence 456779999999 6779999999999999999999999999999999999999999999999999999999 79
Q ss_pred Cch----hhhHhhHHHHHHHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHh
Q 014164 120 PPF----ETFISEISMTKSSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIA 195 (429)
Q Consensus 120 ~~~----~a~~~ev~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALa 195 (429)
|+. ++. .|+..+++.++|++..++++.+.... ......+...++.++|+|||++|+||| |.... +++++||+
T Consensus 89 ~~~~rl~~a~-~ev~~~~~~~~~~a~~~~~~~g~~~~-~~~~~~~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALa 164 (463)
T 2h5g_A 89 PLLKRLSLST-SKLNSLAIGLRQIAASSQDSVGRVLR-RTRIAKNLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIA 164 (463)
T ss_dssp HHHHTTCCCH-HHHHHHHHHHHHHHHHCTTSTTCEEE-EEEEETTEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHH
T ss_pred chhhhhhhhH-HHHHHHHHHHHHHHHhhHhhcCcccc-cccCCCCceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHH
Confidence 987 465 79999999999999988887765421 110012345688999999999999887 77766 89999999
Q ss_pred cCCeEEecCCCCChHHHHHHHHHHhhhc----CCCceEEecCCHHHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccC
Q 014164 196 AGNAVVLKPSEIAPATSSLLAKLLEDYV----DNSAVRVVEGAVAETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLT 270 (429)
Q Consensus 196 aGN~vV~kps~~~~~~~~~l~~~l~~al----P~~~v~~v~~~~~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~ 270 (429)
+||+||+|||+.+|+++.+|++++.+++ |+|+||+|+|+.+.+..|+.|+ +|.|.||||+.+|+.|.+.++ ++
T Consensus 165 aGN~VVlKps~~tp~t~~~l~~l~~~al~~~GP~gvv~vv~g~~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa--l~ 242 (463)
T 2h5g_A 165 SGNGLLLKGGKEAAHSNRILHLLTQEALSIHGVKEAVQLVNTREEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK--GI 242 (463)
T ss_dssp HTCEEEEECCGGGHHHHHHHHHHHHHHHHTTTCGGGEEECCTTCCC-------CCCSEEEEESCHHHHHHHHHHCS--SS
T ss_pred cCCEEEEECCCCcHHHHHHHHHHHHHHHHhcCCCCeEEEEcCCHHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC--CC
Confidence 9999999999999999999999999986 5999999999666789999997 999999999999999999887 89
Q ss_pred ceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCCCCCcccc
Q 014164 271 PVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSR 350 (429)
Q Consensus 271 ~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gp 350 (429)
|+++|+|||||+||++|||++.|++.+++++| .| ||.|+++++||||+++|+ ||
T Consensus 243 pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f-~n-GQ~C~a~~rvlV~~~i~d------------------------~p 296 (463)
T 2h5g_A 243 PVMGHSEGICHMYVDSEASVDKVTRLVRDSKC-EY-PAACNALETLLIHRDLLR------------------------TP 296 (463)
T ss_dssp CBCSCSCCCEEEEECTTCCTTTHHHHHHHHHH-SC-TTSTTSEEEEEEEGGGTT------------------------SH
T ss_pred CEEEecCCcceEEEcCCCCHHHHHHHHHHHhc-cC-CCccccCcEEEEeccccc------------------------hH
Confidence 99999999999999999999999999999999 98 999999999999999998 23
Q ss_pred cCCHHHHHHHHhHHHhhh-cCCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014164 351 IVNPFHFARLASLLDEDK-VSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 351 l~~~~~~~~~~~~i~~a~-~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+ +++ +++++. .|++++.|+.....|+|+ +++|.+++||+||||++|++|+|+||||+++|++
T Consensus 297 ~-----~~~---~i~~~~~~Ga~v~~G~~~~~~g~~~--------~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~ 359 (463)
T 2h5g_A 297 L-----FDQ---IIDMLRVEQVKIHAGPKFASYLTFS--------PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKY 359 (463)
T ss_dssp H-----HHH---HHHHHHHTTCEEEECHHHHC-----------------CCSSCCCCSSEEEEEEESSHHHHHHHHHHH
T ss_pred H-----HHH---HHHHHHhCCCEEEeCCcccccCccC--------CCCchHHhccccCceEEEEEeCCHHHHHHHHHcC
Confidence 2 223 355554 467887554433345543 5789999999999999999999999999999974
No 50
>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1
Probab=100.00 E-value=5.1e-63 Score=497.09 Aligned_cols=325 Identities=19% Similarity=0.194 Sum_probs=271.3
Q ss_pred HHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCc----hhhhHhhHHH-HHHHHHHHHHH
Q 014164 68 KAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP----FETFISEISM-TKSSCKLALKE 142 (429)
Q Consensus 68 dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~~~ev~~-a~~~l~~~~~~ 142 (429)
.+++|+++|++||+.|+.++..+|.++|+++++.|++++++|++++++|+|||. .++...|+.. +++.++++++.
T Consensus 15 ~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~ 94 (468)
T 1vlu_A 15 SSQQIAKNARKAGNILKTISNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQG 94 (468)
T ss_dssp HHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHH
Confidence 688999999999999999999999999999999999999999999999999998 8875579999 99999999999
Q ss_pred HHhhcCCCcc--cc-ccc--CCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHH
Q 014164 143 LKYWTKPEKA--KT-SLT--TYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAK 217 (429)
Q Consensus 143 ~~~~~~~~~~--~~-~~~--~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~ 217 (429)
++++...... .. +.. ..+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++..+++
T Consensus 95 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ 172 (468)
T 1vlu_A 95 IKDVAELEDPVGKVKMARELDDGLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAK 172 (468)
T ss_dssp HHHHHHSCCSSSCEEEEEEEETTEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHH
T ss_pred HHHHhhcCCCCCeecccccCCCCceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHH
Confidence 9888732210 00 000 11345688999999999999999 9 9999999999999999999999999999999999
Q ss_pred HHh----h----h-cCCCceEEecCCH-HHHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcC
Q 014164 218 LLE----D----Y-VDNSAVRVVEGAV-AETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDS 286 (429)
Q Consensus 218 ~l~----~----a-lP~~~v~~v~~~~-~~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~ 286 (429)
++. + + +|+|+||+|+ +. +.++.|+.|+ +|.|.||||+.+|+.|.+.+ ++|+++|+|||||+||++
T Consensus 173 l~~~aL~e~~~~aGlP~gvv~vv~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a---~kpv~lElGGk~p~iV~~ 248 (468)
T 1vlu_A 173 IVNDTIAQFQSETGVPVGSVQLIE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT---KIPVLGHADGICSIYLDE 248 (468)
T ss_dssp HHHHHHHHHHHHHCCCTTSEEECC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC---CSCBTTBCSCCEEEEECT
T ss_pred HHHHHHHhhchhcCCCCCcEEEEC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc---CCCEEeecCCccceEECC
Confidence 995 7 8 9999999999 65 5788899997 99999999999999999876 699999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhC---CCCCCCCcccccCCHHHHHHHHhH
Q 014164 287 TINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFG---KNPMESKDLSRIVNPFHFARLASL 363 (429)
Q Consensus 287 dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~---g~~~~~~~~gpl~~~~~~~~~~~~ 363 (429)
|||++.|++.+++++| +|+| .|+++++||||+++ ++|+++|+++++++++ |+|.+ .++
T Consensus 249 dADl~~Aa~~i~~~~~-~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~----------------~~~ 309 (468)
T 1vlu_A 249 DADLIKAKRISLDAKT-NYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL----------------KTA 309 (468)
T ss_dssp TCCHHHHHHHHHHTTC-C-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH----------------HHH
T ss_pred CCCHHHHHHHHHHHhc-CCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH----------------hcc
Confidence 9999999999999999 9999 99999999999999 9999999999999986 65421 334
Q ss_pred -HHhhhcCCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014164 364 -LDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 364 -i~~a~~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
++++. ++++||. | ++||++ ++++|.+++||+||||++|++|+|++|||+++|++
T Consensus 310 ~i~~a~---~~~~gG~----g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~ 364 (468)
T 1vlu_A 310 YFDKLN---ELGKLTE----A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTH 364 (468)
T ss_dssp HHHHHH---HHTCCCH----H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTS
T ss_pred cccccc---eeeccCC----C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhC
Confidence 55543 3556765 4 689987 78899999999999999999999999999999975
No 51
>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}
Probab=100.00 E-value=2.2e-59 Score=468.87 Aligned_cols=317 Identities=18% Similarity=0.220 Sum_probs=259.2
Q ss_pred HHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCc----hhhhH-------hhHHHHHH
Q 014164 66 VEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP----FETFI-------SEISMTKS 134 (429)
Q Consensus 66 ~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~~-------~ev~~a~~ 134 (429)
.+|+++|+++|++||+.|+.+++.+|.++|+++++.|+++.++|++++++|+||+. .++.. .|+..+++
T Consensus 25 ~~~v~~av~~A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~ 104 (444)
T 4ghk_A 25 DQYMTDVGRRARRASRSIARASTAAKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVE 104 (444)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhhCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999999985 35543 36888888
Q ss_pred HHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHHH
Q 014164 135 SCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSL 214 (429)
Q Consensus 135 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~ 214 (429)
.+++++.+.+. .+ ...+......+...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|+++.+
T Consensus 105 ~l~~~a~~~~~-~g-~~~~~~~~~~~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~ 180 (444)
T 4ghk_A 105 GLRQVATLPDP-IG-EMSNLKYRPSGIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTA 180 (444)
T ss_dssp HHHHHHHSCCC-TT-CEEEEEECTTSCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHH
T ss_pred HHHHHHhhccc-cC-ccCCcccCCCCccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHH
Confidence 88888776542 11 1111110123456789999999999999998 8 5889999999999999999999999999999
Q ss_pred HHHHH----hhh-cCCCceEEecC-CHH-HHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEcC
Q 014164 215 LAKLL----EDY-VDNSAVRVVEG-AVA-ETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVDS 286 (429)
Q Consensus 215 l~~~l----~~a-lP~~~v~~v~~-~~~-~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~ 286 (429)
+++++ .++ +|+|+||+++| +.+ .+..|..|+ +|.|.||||+.+++.+.+.+ ++|+++|+|||||+||++
T Consensus 181 l~~l~~~~l~~aGlP~gvv~vv~g~~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a---~~pv~lELGGk~p~IV~~ 257 (444)
T 4ghk_A 181 LAKLIGEGLAEAGLPQDTVQVVETADRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA---RVPMIKHLDGICHVYVDD 257 (444)
T ss_dssp HHHHHHHHHHHTTCCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---CSCBCCCCCCCCEEEECT
T ss_pred HHHHHHHHHHHcCCCcccEEEEeCCCHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC---CCCEEEEcCCcCeEEECC
Confidence 99997 567 99999999998 554 566777786 99999999999999998775 699999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhC---CCCCCCCcccccCCHHHHHHHHhH
Q 014164 287 TINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFG---KNPMESKDLSRIVNPFHFARLASL 363 (429)
Q Consensus 287 dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~---g~~~~~~~~gpl~~~~~~~~~~~~ 363 (429)
|||++.|++.+++++| +|+| .|++++|||||+++|++|+++|+++++++++ |+| ...++
T Consensus 258 dADl~~Aa~~i~~~~~-~n~G-~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p----------------~~~~~ 319 (444)
T 4ghk_A 258 RASVTKALTVCDNAKT-HRYG-TCNTMETLLVARGIAPAVLSPLGRLYREKGVELRVDA----------------DARAV 319 (444)
T ss_dssp TCCHHHHHHHCC-----------CCCCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECH----------------HHHHH
T ss_pred CCCHHHHHHHHHHHhc-CCCc-ccCcCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCH----------------HHHHH
Confidence 9999999999999999 9999 9999999999999999999999999999877 543 12456
Q ss_pred HHhhhcCCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014164 364 LDEDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 364 i~~a~~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
++++.. | ++ ++++|.+++||+||||++|++|+|++|||+++|++
T Consensus 320 i~~a~~-------------G------~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~ 363 (444)
T 4ghk_A 320 LEAAGV-------------G------PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEY 363 (444)
T ss_dssp HHHTTC-------------C------CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHH
T ss_pred HHhccc-------------C------cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhC
Confidence 665431 2 11 34678999999999999999999999999999975
No 52
>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1
Probab=100.00 E-value=3.1e-59 Score=465.61 Aligned_cols=316 Identities=17% Similarity=0.256 Sum_probs=268.9
Q ss_pred CHHHHHHHHHHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCc----hhhhH-------hhHHHHH
Q 014164 65 DVEKAASLMKELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKPP----FETFI-------SEISMTK 133 (429)
Q Consensus 65 ~~~dv~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~----~~a~~-------~ev~~a~ 133 (429)
..+++++++++|++||+.|+.+++.+|.++|++++++|++++++|++++++|+||+. .++.. .|+..++
T Consensus 12 ~~~~~~~av~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~ 91 (427)
T 1o20_A 12 HMDELLEKAKKVREAWDVLRNATTREKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMI 91 (427)
T ss_dssp --CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHH
Confidence 346899999999999999999999999999999999999999999999999999985 55531 5899999
Q ss_pred HHHHHHHHHHHhhcCCCcccccccCCCCcceEEeecceEEEEEcCCchhhhhhhhHHHHHHhcCCeEEecCCCCChHHHH
Q 014164 134 SSCKLALKELKYWTKPEKAKTSLTTYPSSAEIISEPLGVVLVISTWNYPFLLSLDPVIGAIAAGNAVVLKPSEIAPATSS 213 (429)
Q Consensus 134 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~ 213 (429)
+.+++++++.+. .+.. ........+...++.++|+|||++|+||| +...++++++||++||+||+|||+.+|+++.
T Consensus 92 ~~l~~~a~~~~~-~g~~-~~~~~~~~~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~ 167 (427)
T 1o20_A 92 KACETVIGLKDP-VGEV-IDSWVREDGLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNK 167 (427)
T ss_dssp HHHHHHHHSCCC-TTCE-EEEEECTTSCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHH
T ss_pred HHHHHHHhcccc-cCcc-ccccccCCCceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHH
Confidence 999998876543 2211 11100012345688999999999999986 4688999999999999999999999999999
Q ss_pred HHHHHHh----hh-cCCCceEEecC-CHH-HHHHHHhcC-CCEEEEeCChHHHHHHHHHHhcccCceeeecCCCCcEEEc
Q 014164 214 LLAKLLE----DY-VDNSAVRVVEG-AVA-ETSALLEQK-WDKILYTGSPRVGRIVMAAAAKHLTPVILELGGKSPAVVD 285 (429)
Q Consensus 214 ~l~~~l~----~a-lP~~~v~~v~~-~~~-~~~~L~~~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~ 285 (429)
++++++. ++ +|+|++|+|+| +.+ .++.|..|+ +|.|.||||+.+|+.|.+.+ ++|+++|+|||||+||+
T Consensus 168 ~l~~l~~~al~eaGlP~gvv~vv~g~~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a---~~~v~lELGGk~p~iV~ 244 (427)
T 1o20_A 168 AIVSAIREALKETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA---TVPVLETGVGNCHIFVD 244 (427)
T ss_dssp HHHHHHHHHHTTSSSCGGGEEECCCCCTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC---SSCBCCCCCCCEEEEEC
T ss_pred HHHHHHHHHHHHcCCCcccEEEecCCChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc---CCCEEEecCCCceEEEe
Confidence 9999998 55 89999999998 544 567777786 99999999999999999887 59999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhcCCCccccccEEEEeCCchHHHHHHHHHHHhhhhCCCCCCCCcccccCCHHHHHHHHhHHH
Q 014164 286 STINLQVTTRRIIAGKWMANNGQACIGVDYIITTKDFAPKLIDSLRNELKEFFGKNPMESKDLSRIVNPFHFARLASLLD 365 (429)
Q Consensus 286 ~dadl~~aa~~i~~~~~~~~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~~~g~~~~~~~~gpl~~~~~~~~~~~~i~ 365 (429)
+|||++.|++.+++++| .|+| .|+++++||||+++|++|+++|++++++++++
T Consensus 245 ~dADl~~Aa~~i~~~~f-~n~G-~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~------------------------- 297 (427)
T 1o20_A 245 ESADLKKAVPVIINAKT-QRPG-TCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE------------------------- 297 (427)
T ss_dssp TTSCHHHHHHHHHHHHH-SCTT-STTSEEEEEEEHHHHHHHHHHHHHHHHHTTCE-------------------------
T ss_pred CCCCHHHHHHHHHHHhc-cCCC-CCCCccEEEEehhhHHHHHHHHHHHHHHcCCe-------------------------
Confidence 99999999999999999 9999 99999999999999999999999999987542
Q ss_pred hhhcCCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHhh
Q 014164 366 EDKVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKAC 428 (429)
Q Consensus 366 ~a~~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~~ 428 (429)
+.||... .+ |+ ||| ++.++.+++||+||||++|++|+|++|||+++|++
T Consensus 298 --------~~gg~~~-~~-~~-Ptl---~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~ 346 (427)
T 1o20_A 298 --------VRGCEKT-RE-IV-PDV---VPATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKY 346 (427)
T ss_dssp --------EEECHHH-HH-HS-TTS---EECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHH
T ss_pred --------eecChhh-hh-hC-Ccc---cCCCcchhhcccccceEEEEEECCHHHHHHHHHhC
Confidence 1222210 12 33 885 34578899999999999999999999999999975
No 53
>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}
Probab=79.12 E-value=46 Score=31.88 Aligned_cols=162 Identities=18% Similarity=0.178 Sum_probs=90.1
Q ss_pred CCCcceEEeecceEEEEEcCCc---hhhhhhhhHHHHHHhcCCeEE--ecCCCCChHHHHHHHHHHhhhcCCCceEEec-
Q 014164 159 YPSSAEIISEPLGVVLVISTWN---YPFLLSLDPVIGAIAAGNAVV--LKPSEIAPATSSLLAKLLEDYVDNSAVRVVE- 232 (429)
Q Consensus 159 ~~~~~~~~~~P~Gvv~~i~p~n---~P~~~~~~~~~~ALaaGN~vV--~kps~~~~~~~~~l~~~l~~alP~~~v~~v~- 232 (429)
.|.....++.|+--|+++.|.- || ++.+...+||-.||+.=| .-|++....-...|+.+-. .|+=.+..
T Consensus 119 ~G~~~g~~~~Pi~~VGlYVPGG~A~yp-SsvLM~aiPAkVAGV~~Iv~~tPp~~G~i~p~iL~AA~l----~Gv~eIy~v 193 (423)
T 4gic_A 119 DGTLLGQKITPLDRVGLYVPGGKAAYP-SSVLMNAVPAKVAGVPELIMAVPAPRGELNALVLAAAYI----SGVDRVFRI 193 (423)
T ss_dssp TSCEEEEEEEECSEEEEECCCSTTCCH-HHHHHHHHHHHHHTCSEEEEECCCGGGCCCHHHHHHHHH----HTCCEEECC
T ss_pred CCCEEEEEEEEecceeEEeeCCCCchh-hHHHHhhccHHHhCCCeEEEecCCCCCCccHHHHHHHHh----cCCcEEEEc
Confidence 4555677889999999999964 55 356667899999999733 3344322122222222211 12223332
Q ss_pred CCHHHHHHHHh----cC-CCEEEEeCChHHHHHHHHHHhcccCceeeec-CCCCcEEE--cCCCCHHHHHHHHHHHHHHh
Q 014164 233 GAVAETSALLE----QK-WDKILYTGSPRVGRIVMAAAAKHLTPVILEL-GGKSPAVV--DSTINLQVTTRRIIAGKWMA 304 (429)
Q Consensus 233 ~~~~~~~~L~~----~~-v~~v~ftGs~~~~~~i~~~~~~~~~~~~~e~-~G~~~~iV--~~dadl~~aa~~i~~~~~~~ 304 (429)
|+.....+|.= -+ ||.|+=.|+.-+...= +.... .+-..+ .|.+=++| ++++|.+..+.+++..+= +
T Consensus 194 GGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AK-r~v~g---~VgIDm~AGPSEilViAD~~a~p~~vAaDLlsQAE-H 268 (423)
T 4gic_A 194 GGAQAVAALAYGTETVPRVDKIVGPGNIYVATAK-KLVFG---QVGIDMVAGPSEILVISDGRTDPDWIAMDLFSQAE-H 268 (423)
T ss_dssp CHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHH-HHHBT---TBEECCCCCCCEEEEEECSCSCHHHHHHHHHHHHT-T
T ss_pred CChhhhhhhccCCCcccceeEEecCCcHHHHHHH-HHhcC---CcCcccccccceEEEEeCCCCCHHHHHHHHHHhhc-c
Confidence 33344444432 23 9999988887654321 11211 122222 35554444 567899999988887764 3
Q ss_pred cCCCccccccEEEEeCCchHHHHHHHHHHHhhh
Q 014164 305 NNGQACIGVDYIITTKDFAPKLIDSLRNELKEF 337 (429)
Q Consensus 305 ~~Gq~C~~~~~v~V~~~~~~~f~~~l~~~~~~~ 337 (429)
.- ..+.++|..+ ++|.+++.+.+.++
T Consensus 269 d~-----~a~~iLvT~s--~~la~~V~~~i~~~ 294 (423)
T 4gic_A 269 DE-----DAQAILISPD--AAHLEAVQASIERL 294 (423)
T ss_dssp CT-----TCEEEEEESC--HHHHHHHHHHHHHH
T ss_pred CC-----CCeEEEEeCc--HHHHHHHHHHHHHH
Confidence 22 2345666665 45555555555443
No 54
>3fgh_A Transcription factor A, mitochondrial; HMG domain, mitochondrial transcription, activator, DNA- binding, mitochondrion, phosphoprotein; 1.35A {Homo sapiens}
Probab=50.64 E-value=30 Score=23.45 Aligned_cols=38 Identities=16% Similarity=0.033 Sum_probs=30.0
Q ss_pred HHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHH
Q 014164 74 KELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIE 111 (429)
Q Consensus 74 ~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~ 111 (429)
+.++.....|+.++..+|..+.......-+++..++..
T Consensus 28 ei~k~lg~~Wk~ls~~eK~~y~~~A~~~k~~Y~~e~~~ 65 (67)
T 3fgh_A 28 EKLKTVKENWKNLSDSEKELYIQHAKEDETRYHNEMKS 65 (67)
T ss_dssp HHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566677899999999999988888777777776653
No 55
>3v42_A Folliculin; tumor suppressor, protein binding; 2.00A {Homo sapiens}
Probab=45.96 E-value=25 Score=30.73 Aligned_cols=66 Identities=12% Similarity=0.087 Sum_probs=42.9
Q ss_pred hhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhhhcCCCceEEecCCHHHHHHHHhcCCCEEEEeCChH
Q 014164 186 SLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLEDYVDNSAVRVVEGAVAETSALLEQKWDKILYTGSPR 256 (429)
Q Consensus 186 ~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~alP~~~v~~v~~~~~~~~~L~~~~v~~v~ftGs~~ 256 (429)
.+..++-.+.+||-||++.+. +.....++.++...+|.+.+++++.+.+ .......+.+.++.+..
T Consensus 20 ~F~~l~~~vl~GnQiIVrg~~--~~~~~s~~~~L~~lLP~~c~~l~~~s~~---Y~~~~~cnilgls~~v~ 85 (226)
T 3v42_A 20 SFRMLAWHVLMGNQVIWKSRD--VDLVQSAFEVLRTMLPVGCVRIIPYSSQ---YEEAYRCNFLGLSPHVQ 85 (226)
T ss_dssp HHHHHHHHHHHTCEEEEECSC--HHHHHHHHHHHGGGSCGGGCCEEEEESS---CCCTTTCSEEEECTTCC
T ss_pred HHHHHHHHHhcCCEEEEEcCC--HHHHHHHHHHHHHhCCHHHHhccccchh---hcchhheeeecCCCCcc
Confidence 345677888999999999864 3344555777777899999999865311 10011255566555544
No 56
>2eqz_A High mobility group protein B3; HMG-box domain, mobility group protein 2A, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=41.52 E-value=57 Score=23.31 Aligned_cols=38 Identities=11% Similarity=-0.099 Sum_probs=29.9
Q ss_pred HHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHH
Q 014164 74 KELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIE 111 (429)
Q Consensus 74 ~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~ 111 (429)
+.++.....|+.++.++|..+.......-+++..++..
T Consensus 47 eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~~~ 84 (86)
T 2eqz_A 47 EFSKKCSERWKTMSGKEKSKFDEMAKADKVRYDREMKD 84 (86)
T ss_dssp HHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556667899999999999988888877777777654
No 57
>2co9_A Thymus high mobility group box protein TOX; TOX protein, HMG box domain, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=39.97 E-value=93 Score=23.04 Aligned_cols=45 Identities=9% Similarity=-0.107 Sum_probs=34.0
Q ss_pred HHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHhcCCC
Q 014164 76 LRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHKDLSKP 120 (429)
Q Consensus 76 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~ 120 (429)
++..-..|+.++..+|..+.......-+++..++.........+.
T Consensus 49 sk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~Y~~~~~~~~ 93 (102)
T 2co9_A 49 SKIVASMWDGLGEEQKQVYKKKTEAAKKEYLKQLAAYRASLVSKS 93 (102)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSC
T ss_pred HHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Confidence 444556899999999999998888888888887776655544433
No 58
>1v63_A Nucleolar transcription factor 1; DNA binding, structural genomics, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: a.21.1.1
Probab=37.36 E-value=93 Score=23.07 Aligned_cols=41 Identities=2% Similarity=-0.151 Sum_probs=33.8
Q ss_pred HHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Q 014164 75 ELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIHK 115 (429)
Q Consensus 75 aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~~ 115 (429)
.++.....|+.++..++..+.......-+++..++......
T Consensus 37 isK~lge~Wk~ls~~eK~~Y~~~A~~~k~~Y~~e~~~Y~~~ 77 (101)
T 1v63_A 37 RMVEIGSRWQRISQSQKEHYKKLAEEQQRQYKVHLDLWVKS 77 (101)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 46667788999999999999998888888888888776543
No 59
>1hry_A Human SRY; DNA, DNA-binding protein, DNA binding protein/DNA complex; HET: DNA; NMR {Homo sapiens} SCOP: a.21.1.1 PDB: 1hrz_A*
Probab=31.05 E-value=72 Score=21.97 Aligned_cols=33 Identities=9% Similarity=-0.054 Sum_probs=23.8
Q ss_pred HHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHH
Q 014164 76 LRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEE 108 (429)
Q Consensus 76 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 108 (429)
++.....|+.++.++|..+.......-+++..+
T Consensus 36 sk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~~ 68 (76)
T 1hry_A 36 SKQLGYQWKMLTEAEKWPFFQEAQKLQAMHREK 68 (76)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 445556899999999988877776655555443
No 60
>2cs1_A PMS1 protein homolog 1; DNA mismatch repair protein PMS1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.57 E-value=43 Score=24.37 Aligned_cols=40 Identities=18% Similarity=0.062 Sum_probs=29.1
Q ss_pred HHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHH
Q 014164 74 KELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAI 113 (429)
Q Consensus 74 ~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~ 113 (429)
+.++.....|+.++..+|..+.......-+++..++....
T Consensus 37 eisk~lg~~Wk~ls~eeK~~y~~~A~~~k~~y~~e~~~y~ 76 (92)
T 2cs1_A 37 DATLQIEELWKTLSEEEKLKYEEKATKDLERYNSQMKRAI 76 (92)
T ss_dssp HHHHHHHHHHHSSCHHHHHHHHHHHHTTTHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3355556789999999999888877776666666665543
No 61
>1gt0_D Transcription factor SOX-2; POU factors, SOX proteins; 2.6A {Mus musculus} SCOP: a.21.1.1 PDB: 2le4_A 1o4x_B
Probab=29.99 E-value=75 Score=22.17 Aligned_cols=33 Identities=12% Similarity=-0.087 Sum_probs=24.7
Q ss_pred HHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHH
Q 014164 76 LRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEE 108 (429)
Q Consensus 76 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 108 (429)
++.....|+.++.++|..+.......-+++..+
T Consensus 34 sk~lg~~Wk~ls~eeK~~y~~~A~~~k~~y~~~ 66 (80)
T 1gt0_D 34 SKRLGAEWKLLSETEKRPFIDEAKRLRALHMKE 66 (80)
T ss_dssp HHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 455567899999999998888777666555544
No 62
>2crj_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; structural DNA-binding protein BRAF35, DNA-bending; NMR {Mus musculus}
Probab=28.96 E-value=78 Score=22.92 Aligned_cols=36 Identities=3% Similarity=-0.133 Sum_probs=28.1
Q ss_pred HHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHH
Q 014164 76 LRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIE 111 (429)
Q Consensus 76 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~ 111 (429)
++..-..|+.++..+|..+.......-+++..++..
T Consensus 39 sk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e~~~ 74 (92)
T 2crj_A 39 TKMLGAEWSKLQPAEKQRYLDEAEKEKQQYLKELWA 74 (92)
T ss_dssp HHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445556799999999999888888777777766654
No 63
>1v64_A Nucleolar transcription factor 1; DNA binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.21.1.1
Probab=28.16 E-value=1.2e+02 Score=22.77 Aligned_cols=41 Identities=10% Similarity=0.007 Sum_probs=33.0
Q ss_pred HHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q 014164 74 KELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEIIEAIH 114 (429)
Q Consensus 74 ~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~la~~~~ 114 (429)
+.++.....|+.++..++..+.......-+++..++.....
T Consensus 43 eisk~lg~~Wk~Ls~~eK~~Y~~~A~~~k~~Y~~e~~~Y~~ 83 (108)
T 1v64_A 43 ERMVLCSQQWKLLSQKEKDAYHKKCDQKKKDYEVELLRFLE 83 (108)
T ss_dssp HHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34566667899999999999999888888888888776543
No 64
>1b93_A Protein (methylglyoxal synthase); glycolytic bypass, lyase; 1.90A {Escherichia coli} SCOP: c.24.1.2 PDB: 1egh_A 1ik4_A* 1s8a_A 1s89_A
Probab=26.95 E-value=96 Score=25.16 Aligned_cols=112 Identities=13% Similarity=0.092 Sum_probs=68.7
Q ss_pred eEEEEEcCCch-hhhhhhhHHHHHHhcCCeEEecCCCCChHHHHHHHHHHhh-h-cCCCceEEecC--CHHHHHHHHhcC
Q 014164 171 GVVLVISTWNY-PFLLSLDPVIGAIAAGNAVVLKPSEIAPATSSLLAKLLED-Y-VDNSAVRVVEG--AVAETSALLEQK 245 (429)
Q Consensus 171 Gvv~~i~p~n~-P~~~~~~~~~~ALaaGN~vV~kps~~~~~~~~~l~~~l~~-a-lP~~~v~~v~~--~~~~~~~L~~~~ 245 (429)
|.++++...+. +-...+..-...++.|..++.- .-|+ +.+.+ . +|-..|+-++- ++..+..+.+..
T Consensus 12 g~V~lsv~D~dK~~~v~~ak~~~~ll~Gf~l~AT-----~gTa----~~L~e~~Gl~v~~v~k~~eGG~p~I~d~I~~ge 82 (152)
T 1b93_A 12 KHIALVAHDHCKQMLMSWVERHQPLLEQHVLYAT-----GTTG----NLISRATGMNVNAMLSGPMGGDQQVGALISEGK 82 (152)
T ss_dssp CEEEEEECGGGHHHHHHHHHHTHHHHTTSEEEEE-----TTHH----HHHHHHHCCCCEEECCGGGTHHHHHHHHHHTTC
T ss_pred CEEEEEEehhhHHHHHHHHHHHHHHhCCCEEEEc-----cHHH----HHHHHHhCceeEEEEecCCCCCchHHHHHHCCC
Confidence 65555554443 4444555566667778877652 2333 44555 4 88777765542 333444454446
Q ss_pred CCEEEEeCC-------hHHHHHHHHHHhcccCceeeecCCCCcEEEcCCCCHHHHHHHHHHHHHHhcCC
Q 014164 246 WDKILYTGS-------PRVGRIVMAAAAKHLTPVILELGGKSPAVVDSTINLQVTTRRIIAGKWMANNG 307 (429)
Q Consensus 246 v~~v~ftGs-------~~~~~~i~~~~~~~~~~~~~e~~G~~~~iV~~dadl~~aa~~i~~~~~~~~~G 307 (429)
++.|+||-+ ...+..|.+.+..+.+|+.--+ ..++.++.+.+ ++..
T Consensus 83 IdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~l---------------atA~a~v~ai~-~~~~ 135 (152)
T 1b93_A 83 IDVLIFFWDPLNAVPHDPDVKALLRLATVWNIPVATNV---------------ATADFIIQSPH-FNDA 135 (152)
T ss_dssp CCEEEEECCTTSCCTTHHHHHHHHHHHHHTTCCEESSH---------------HHHHHHHTSGG-GGSC
T ss_pred ccEEEEcCCcccCCcccccHHHHHHHHHHcCCCEEeCH---------------HHHHHHHHHHh-cccc
Confidence 999999866 4567888888888777765443 45666777766 5553
No 65
>1s7i_A Hypothetical protein PA1349; structural genomics, protein structure initiative, pseudomon aeruginosa, MCSG, PSI; 1.80A {Pseudomonas aeruginosa} SCOP: d.58.4.9
Probab=26.57 E-value=1.1e+02 Score=23.75 Aligned_cols=69 Identities=6% Similarity=-0.047 Sum_probs=36.4
Q ss_pred HHHHHHHhHHHhhhcCCEEEeCCccC--CCCceE-----ecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHh
Q 014164 355 FHFARLASLLDEDKVSDKIVYGGQRD--EKQLKI-----APTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKA 427 (429)
Q Consensus 355 ~~~~~~~~~i~~a~~~~~vl~gg~~~--~~g~~~-----~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~ 427 (429)
+..+...+++++....+.++.|+... ..+..+ .|+|.... ..-..|..|= +.|+.++|.|||++++.+
T Consensus 30 ~~~~~~~~~~~~l~~~G~lv~g~~L~~~~~a~~Vr~~~g~~~VtdGP----faEtkE~lgG-~~iie~~s~deA~e~A~~ 104 (124)
T 1s7i_A 30 AIVDECMTYSDQLGKAGHYIASHALQSVQTATTLRHQGGRLAMTDGP----FAETKEQLGG-FYLIEARDLNQALQIAAK 104 (124)
T ss_dssp HHHHHHHHHHHHHHHHTCEEEEEECCCGGGCEEEEECSSCEEEEESC----SSCCSSEEEE-EEEEEESSHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHCCEEEecCcCCCCcceEEEEecCCceeEecCC----CcCCccccee-EEEEEeCCHHHHHHHHHh
Confidence 34455666666655555565543321 122222 23333221 1112355543 466789999999999876
Q ss_pred h
Q 014164 428 C 428 (429)
Q Consensus 428 ~ 428 (429)
+
T Consensus 105 ~ 105 (124)
T 1s7i_A 105 I 105 (124)
T ss_dssp C
T ss_pred C
Confidence 3
No 66
>3u2b_C Transcription factor SOX-4; HMG domain, transcriptional regulation, transcription-DNA CO; HET: DNA; 2.40A {Mus musculus} SCOP: a.21.1.1
Probab=24.76 E-value=1e+02 Score=21.31 Aligned_cols=33 Identities=9% Similarity=-0.053 Sum_probs=24.1
Q ss_pred HHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHH
Q 014164 76 LRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEE 108 (429)
Q Consensus 76 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 108 (429)
++.....|..++.++|..+.......-+++..+
T Consensus 34 sk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~~ 66 (79)
T 3u2b_C 34 SKRLGKRWKLLKDSDKIPFIQEAERLRLKHMAD 66 (79)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 444556899999999998887776665555443
No 67
>1j46_A SRY, sex-determining region Y protein; MALE sex determining factor, SRY, sex-reversal mutation; NMR {Homo sapiens} SCOP: a.21.1.1 PDB: 1j47_A
Probab=23.93 E-value=1.4e+02 Score=21.03 Aligned_cols=33 Identities=9% Similarity=-0.054 Sum_probs=23.6
Q ss_pred HHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHH
Q 014164 76 LRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEE 108 (429)
Q Consensus 76 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 108 (429)
++.....|+.++.++|..+.......-+++..+
T Consensus 36 sk~lg~~Wk~ls~eeK~~y~~~A~~~k~~y~~~ 68 (85)
T 1j46_A 36 SKQLGYQWKMLTEAEKWPFFQEAQKLQAMHREK 68 (85)
T ss_dssp HHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
Confidence 345556799999999988877766655555443
No 68
>2fiu_A Conserved hypothetical protein; alpha-beta, dimeric alpha-beta barrels, structural genomics, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.58.4.16
Probab=23.39 E-value=2.2e+02 Score=20.84 Aligned_cols=56 Identities=11% Similarity=0.043 Sum_probs=33.7
Q ss_pred CHHHHHHHHhHHHhh--hcCCEEEeCCccCCCCceEecEEEecCCCCCCccccCccccceeeEecCCHHHHHHHHHh
Q 014164 353 NPFHFARLASLLDED--KVSDKIVYGGQRDEKQLKIAPTILLDVPDDSTIMKEEIFGPLLPIVTVSIVSSAHFKLKA 427 (429)
Q Consensus 353 ~~~~~~~~~~~i~~a--~~~~~vl~gg~~~~~g~~~~Ptvl~~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~l~n~ 427 (429)
+++.+++..+..... +.|++++..|.. |.++.... .+-+.|+.|.|.+.|.+..+.
T Consensus 16 d~e~y~~Y~~~~~~~~~~~gGr~l~~g~~--------~~~~eG~~-----------~~~~viieFpS~~aa~~~~~s 73 (99)
T 2fiu_A 16 DSERYKDYVSTAKPAFERFGANFLARGGS--------VTELEGTA-----------RARNVVIEFPSVQHAIDCYNS 73 (99)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCEEEEESCC--------EEEEESCC-----------CSEEEEEEESSHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHHHHHcCcEEEEECCC--------ceEEecCC-----------cCeEEEEECCCHHHHHHHHcC
Confidence 344444444433333 358888876543 34443311 237789999999999887764
No 69
>4euw_A Transcription factor SOX-9; protein-DNA complex, HMG domain, activator, DNA-binding, NUC transcription; HET: DNA; 2.77A {Homo sapiens}
Probab=23.30 E-value=1.4e+02 Score=22.25 Aligned_cols=34 Identities=0% Similarity=-0.085 Sum_probs=24.7
Q ss_pred HHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHH
Q 014164 75 ELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEE 108 (429)
Q Consensus 75 aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 108 (429)
.++.....|+.++.++|..+.......-+++..+
T Consensus 60 isk~lg~~Wk~ls~eeK~~Y~~~A~~~k~~y~~e 93 (106)
T 4euw_A 60 LSKTLGKLWRLLNESEKRPFVEEAERLRVQHKKD 93 (106)
T ss_dssp HHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3455567899999999998887766655555444
No 70
>1ckt_A High mobility group 1 protein; high-mobility group domain, BENT DNA, protein-drug-DNA compl regulation-DNA complex; HET: DNA 5IU; 2.50A {Rattus norvegicus} SCOP: a.21.1.1 PDB: 1j3x_A
Probab=23.14 E-value=65 Score=21.85 Aligned_cols=36 Identities=14% Similarity=-0.084 Sum_probs=26.9
Q ss_pred HHHHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHH
Q 014164 74 KELRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEI 109 (429)
Q Consensus 74 ~aA~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 109 (429)
+.++.....|+.++..+|..+.......-+++..++
T Consensus 33 eisk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~ 68 (71)
T 1ckt_A 33 EFSKKCSERWKTMSAKEKGKFEDMAKADKARYEREM 68 (71)
T ss_dssp HHHHHHHHHHHTCCTTTSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 345566678999999999888877777666666554
No 71
>3pk1_B Apoptosis regulator BAX; BCL-2 family fold, regulation of apoptosis, mitochondri apoptosis-apoptosis regulator complex; 2.49A {Homo sapiens} PDB: 3pl7_C 2xa0_C
Probab=22.91 E-value=1.2e+02 Score=17.60 Aligned_cols=21 Identities=14% Similarity=0.147 Sum_probs=16.4
Q ss_pred CHHHHHHHHHHHHHHHHHhHH
Q 014164 87 SYEWRMSQIQSIANMIEEKEE 107 (429)
Q Consensus 87 ~~~~R~~~L~~~a~~l~~~~~ 107 (429)
+.++-.+.|+++++.|..|.|
T Consensus 8 ~~K~l~~cL~~IgDEld~N~E 28 (34)
T 3pk1_B 8 STKKLSECLKRIGDELDSNME 28 (34)
T ss_dssp THHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHcccHH
Confidence 456667899999999988754
No 72
>2lef_A LEF-1 HMG, protein (lymphoid enhancer-binding factor); LEF1, HMG, TCR-A, transcription factor; HET: DNA; NMR {Mus musculus} SCOP: a.21.1.1
Probab=22.82 E-value=1.2e+02 Score=21.41 Aligned_cols=33 Identities=6% Similarity=-0.244 Sum_probs=23.5
Q ss_pred HHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHH
Q 014164 76 LRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEE 108 (429)
Q Consensus 76 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 108 (429)
++.....|..++.++|..+.......-+.+..+
T Consensus 34 sk~lg~~Wk~ls~eeK~~y~~~A~~~k~~y~~~ 66 (86)
T 2lef_A 34 NQILGRRWHALSREEQAKYYELARKERQLHMQL 66 (86)
T ss_dssp HHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 445556799999999988777766655555443
No 73
>4a3n_A Transcription factor SOX-17; 2.40A {Homo sapiens} SCOP: a.21.1.0
Probab=22.50 E-value=81 Score=21.27 Aligned_cols=31 Identities=6% Similarity=-0.064 Sum_probs=22.7
Q ss_pred HHHHhhhhcCCCHHHHHHHHHHHHHHHHHhH
Q 014164 76 LRNNYNSRKTKSYEWRMSQIQSIANMIEEKE 106 (429)
Q Consensus 76 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 106 (429)
++.....|+.++.++|..+.......-+++.
T Consensus 34 sk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~ 64 (71)
T 4a3n_A 34 SKMLGKSWKALTLAEKRPFVEEAERLRVQHM 64 (71)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHH
Confidence 4455568999999999988877666555544
No 74
>3f27_D Transcription factor SOX-17; protein-DNA complex, HMG domain, endodermal, activator, DNA- nucleus, transcription regulation, transcrip complex; HET: DNA; 2.75A {Mus musculus} SCOP: a.21.1.1 PDB: 2yul_A
Probab=22.08 E-value=1.2e+02 Score=21.16 Aligned_cols=33 Identities=6% Similarity=-0.015 Sum_probs=24.1
Q ss_pred HHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHH
Q 014164 76 LRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEE 108 (429)
Q Consensus 76 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~ 108 (429)
++.....|..++.++|..+.......-+.+..+
T Consensus 38 sk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~~ 70 (83)
T 3f27_D 38 SKMLGKSWKALTLAEKRPFVEEAERLRVQHMQD 70 (83)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 444556899999999998887776665555443
No 75
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=21.89 E-value=69 Score=25.19 Aligned_cols=46 Identities=22% Similarity=0.271 Sum_probs=31.5
Q ss_pred CceEEecCCHHH-HHHHHh-cCCCEEEEeCChHHHHHHHHHHhcccCc
Q 014164 226 SAVRVVEGAVAE-TSALLE-QKWDKILYTGSPRVGRIVMAAAAKHLTP 271 (429)
Q Consensus 226 ~~v~~v~~~~~~-~~~L~~-~~v~~v~ftGs~~~~~~i~~~~~~~~~~ 271 (429)
+.+.+++|+++. -...++ .++.++++||+......+.+.+.+...|
T Consensus 53 ~~l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~~~i~~~A~~~~ip 100 (139)
T 2ioj_A 53 NAALVTGGDRSDLLLTALEMPNVRCLILTGNLEPVQLVLTKAEERGVP 100 (139)
T ss_dssp SEEEEEETTCHHHHHHHTTCTTEEEEEEETTCCCCHHHHHHHHHHTCC
T ss_pred CEEEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCCHHHHHHHHHCCCe
Confidence 567778775543 334444 4589999999988777777777655444
No 76
>1hme_A High mobility group protein fragment-B; DNA-binding; NMR {Rattus norvegicus} SCOP: a.21.1.1 PDB: 1hmf_A 1nhm_A 1nhn_A 1hsm_A 1hsn_A 1j3c_A 1j3d_A 2yqi_A
Probab=21.64 E-value=62 Score=22.42 Aligned_cols=34 Identities=12% Similarity=0.077 Sum_probs=26.3
Q ss_pred HHHHhhhhcCCCHHHHHHHHHHHHHHHHHhHHHH
Q 014164 76 LRNNYNSRKTKSYEWRMSQIQSIANMIEEKEEEI 109 (429)
Q Consensus 76 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~~~l 109 (429)
++.....|+.++.++|..+.......-+++..++
T Consensus 38 sk~lg~~Wk~ls~~eK~~y~~~A~~~k~~y~~e~ 71 (77)
T 1hme_A 38 AKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDI 71 (77)
T ss_dssp HHHHHHHHHHSCGGGSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555578999999999988888877777766654
No 77
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=20.56 E-value=50 Score=26.25 Aligned_cols=59 Identities=8% Similarity=0.101 Sum_probs=37.8
Q ss_pred HHHhh-h-cCCCceEEec-C-CHHHHHHHHhcCCCEEEEeCC-------hHHHHHHHHHHhcccCceeee
Q 014164 217 KLLED-Y-VDNSAVRVVE-G-AVAETSALLEQKWDKILYTGS-------PRVGRIVMAAAAKHLTPVILE 275 (429)
Q Consensus 217 ~~l~~-a-lP~~~v~~v~-~-~~~~~~~L~~~~v~~v~ftGs-------~~~~~~i~~~~~~~~~~~~~e 275 (429)
+.|.+ . ++-..|+-++ + ++..+..+.+..++.|+||-+ ...+..|.+.+..+.+|+.-.
T Consensus 42 ~~L~e~~Gl~v~~v~k~~~eG~p~I~d~I~~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~~T~ 111 (134)
T 2xw6_A 42 RRIEEATGLTVEKLLSGPLGGDQQMGARVAEGRILAVIFFRDPLTAQPHEPDVQALLRVCDVHGVPLATN 111 (134)
T ss_dssp HHHHHHHCCCCEECSCGGGTHHHHHHHHHHTTCEEEEEEECCTTTCCTTSCCSHHHHHHHHHHTCCEECS
T ss_pred HHHHHhhCceEEEEEecCCCCcchHHHHHHCCCccEEEEccCcccCCCccchHHHHHHHHHHcCCCeEcC
Confidence 44555 4 8777776666 5 344455555556999999876 234567888877766665543
No 78
>2e6o_A HMG box-containing protein 1; HMG-box domain, HMG-box transcription factor 1, high mobility group box transcription factor 1, structural genomics; NMR {Homo sapiens}
Probab=20.46 E-value=1.4e+02 Score=21.26 Aligned_cols=31 Identities=16% Similarity=-0.054 Sum_probs=22.3
Q ss_pred HHHHhhhhcCCCHHHHHHHHHHHHHHHHHhH
Q 014164 76 LRNNYNSRKTKSYEWRMSQIQSIANMIEEKE 106 (429)
Q Consensus 76 A~~A~~~w~~~~~~~R~~~L~~~a~~l~~~~ 106 (429)
++.....|+.++.++|..+.......-+++.
T Consensus 49 sk~lg~~Wk~ls~eeK~~y~~~A~~~k~~~~ 79 (87)
T 2e6o_A 49 SVILGDRWKKMKNEERRMYTLEAKALAEEQK 79 (87)
T ss_dssp HHHHHHHHHHSCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCHHHHHHHHHHHHHHHHHHH
Confidence 3445568999999999888777666555543
Done!