AmiGO: BLAST Results


BLAST match view associations BLAST with HDA9 HDA9 HDA9 AT3G44680	protein from Arabidopsis thaliana	4.2e-214
BLAST match view associations BLAST with HDAC1 HDAC1 HDAC1 Histone deacetylase 1	protein from Bos taurus	6.5e-151
BLAST match view associations BLAST with Hdac1 Hdac1 Hdac1 histone deacetylase 1	protein from Mus musculus	8.3e-151
BLAST match view associations BLAST with Hdac1l Hdac1l Hdac1l histone deacetylase 1-like	gene from Rattus norvegicus	8.3e-151
BLAST match view associations BLAST with HDAC1 HDAC1 HDAC1 Histone deacetylase 1	protein from Homo sapiens	7.4e-150
BLAST match view associations BLAST with HDAC1 HDAC1 HDAC1 Uncharacterized protein	protein from Canis lupus familiaris	7.4e-150
BLAST match view associations BLAST with HDAC1 HDAC1 HDAC1 Histone deacetylase	protein from Canis lupus familiaris	7.4e-150
BLAST match view associations BLAST with HDAC1 HDAC1 HDAC1 Histone deacetylase	protein from Canis lupus familiaris	7.4e-150
BLAST match view associations BLAST with HDAC1 HDAC1 HDAC1 Histone deacetylase 1	protein from Gallus gallus	3.8e-149
BLAST match view associations BLAST with LOC100622482 LOC100622482 LOC100622482 Histone deacetylase	protein from Sus scrofa	1.2e-147
BLAST match view associations BLAST with HDAC1 HDAC1 HDAC1 Histone deacetylase 1	protein from Strongylocentrotus purpuratus	6.4e-147
BLAST match view associations BLAST with hdac1 hdac1 hdac1 histone deacetylase 1	gene_product from Danio rerio	8.1e-147
BLAST match view associations BLAST with hdaA hdaA hdaA type-1 histone deacetylase	gene from Dictyostelium discoideum	1.3e-146
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase	protein from Gallus gallus	2.8e-146
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase 2	protein from Homo sapiens	2.8e-146
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase 2	protein from Homo sapiens	2.8e-146
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase	protein from Sus scrofa	2.8e-146
BLAST match view associations BLAST with Hdac2 Hdac2 Hdac2 histone deacetylase 2	protein from Mus musculus	7.3e-146
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase	protein from Canis lupus familiaris	1.2e-143
BLAST match view associations BLAST with Rpd3 Rpd3 Rpd3	protein from Drosophila melanogaster	3.3e-143
BLAST match view associations BLAST with HDAC3 HDAC3 HDAC3 Histone deacetylase 3	protein from Gallus gallus	7.8e-142
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase 2	protein from Gallus gallus	1.3e-141
BLAST match view associations BLAST with HDAC3 HDAC3 HDAC3 Histone deacetylase	protein from Gallus gallus	2.6e-141
BLAST match view associations BLAST with Hdac3 Hdac3 Hdac3 histone deacetylase 3	protein from Mus musculus	4.9e-140
BLAST match view associations BLAST with Hdac3 Hdac3 Hdac3 histone deacetylase 3	gene from Rattus norvegicus	4.9e-140
BLAST match view associations BLAST with Hdac3 Hdac3 Hdac3 Histone deacetylase 3	protein from Rattus norvegicus	4.9e-140
BLAST match view associations BLAST with hdaB hdaB hdaB type-1 histone deacetylase	gene from Dictyostelium discoideum	8.0e-140
BLAST match view associations BLAST with HDAC3 HDAC3 HDAC3 Histone deacetylase	protein from Canis lupus familiaris	1.0e-139
BLAST match view associations BLAST with HDAC3 HDAC3 HDAC3 Histone deacetylase 3	protein from Homo sapiens	1.0e-139
BLAST match view associations BLAST with HDAC3 HDAC3 HDAC3 Histone deacetylase	protein from Sus scrofa	1.0e-139
BLAST match view associations BLAST with HD1 HD1 HD1 AT4G38130	protein from Arabidopsis thaliana	3.5e-139
BLAST match view associations BLAST with hdac3 hdac3 hdac3 histone deacetylase 3	gene_product from Danio rerio	2.4e-138
BLAST match view associations BLAST with Hdac3 Hdac3 Hdac3 Histone deacetylase 3	protein from Drosophila melanogaster	4.0e-138
BLAST match view associations BLAST with RPD31 RPD31 RPD31	gene_product from Candida albicans	2.8e-137
BLAST match view associations BLAST with RPD31 RPD31 RPD31 Potential Sin3.Rpd3 histone deacetylase complex component Rpd3p	protein from Candida albicans SC5314	2.8e-137
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase	protein from Canis lupus familiaris	2.8e-137
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase	protein from Homo sapiens	2.8e-137
BLAST match view associations BLAST with hda-1 hda-1 hda-1	gene from Caenorhabditis elegans	3.7e-135
BLAST match view associations BLAST with hda-1 hda-1 hda-1 Histone deacetylase 1	protein from Caenorhabditis elegans	3.7e-135
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase	protein from Bos taurus	5.4e-134
BLAST match view associations BLAST with RPD3 RPD3 RPD3 Histone deacetylase	gene from Saccharomyces cerevisiae	3.9e-131
BLAST match view associations BLAST with RPD3 RPD3 RPD3	gene_product from Candida albicans	5.0e-131
BLAST match view associations BLAST with RPD3 RPD3 RPD3 Histone deacetylase	protein from Candida albicans SC5314	5.0e-131
BLAST match view associations BLAST with hda-3 hda-3 hda-3	gene from Caenorhabditis elegans	1.7e-130
BLAST match view associations BLAST with HDA6 HDA6 HDA6 AT5G63110	protein from Arabidopsis thaliana	6.6e-129
BLAST match view associations BLAST with F1M4V8 F1M4V8 F1M4V8 Histone deacetylase	protein from Rattus norvegicus	4.3e-125
BLAST match view associations BLAST with LOC100521667 LOC100521667 LOC100521667 Histone deacetylase	protein from Sus scrofa	6.6e-121
BLAST match view associations BLAST with HOS2 HOS2 HOS2	gene_product from Candida albicans	1.4e-119
BLAST match view associations BLAST with HOS2 HOS2 HOS2 Histone deacetylase	protein from Candida albicans SC5314	1.4e-119
BLAST match view associations BLAST with HOS2 HOS2 HOS2 Histone deacetylase and subunit of Set3 and Rpd3L complexes	gene from Saccharomyces cerevisiae	1.0e-116
BLAST match view associations BLAST with hda-2 hda-2 hda-2	gene from Caenorhabditis elegans	3.5e-107
BLAST match view associations BLAST with HDA7 HDA7 HDA7 AT5G35600	protein from Arabidopsis thaliana	8.3e-106
BLAST match view associations BLAST with HDAC3 HDAC3 HDAC3 Histone deacetylase 3	protein from Homo sapiens	4.4e-86
BLAST match view associations BLAST with hdac8 hdac8 hdac8 histone deacetylase 8	gene_product from Danio rerio	1.2e-80
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase 8	protein from Homo sapiens	4.7e-80
BLAST match view associations BLAST with Hdac8 Hdac8 Hdac8 histone deacetylase 8	protein from Mus musculus	7.6e-80
BLAST match view associations BLAST with Hdac8 Hdac8 Hdac8 histone deacetylase 8	gene from Rattus norvegicus	7.6e-80
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase	protein from Bos taurus	2.0e-79
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase	protein from Canis lupus familiaris	2.6e-79
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase	protein from Gallus gallus	1.4e-78
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase 8	protein from Bos taurus	1.8e-78
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase	protein from Canis lupus familiaris	4.3e-77
BLAST match view associations BLAST with HDAC1 HDAC1 HDAC1 Histone deacetylase 1	protein from Homo sapiens	4.6e-73
BLAST match view associations BLAST with hda17 hda17 hda17 histone deacetylase 17	protein from Arabidopsis thaliana	4.3e-70
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase 8	protein from Homo sapiens	3.7e-64
BLAST match view associations BLAST with hda10 hda10 hda10 histone deacetylase 10	protein from Arabidopsis thaliana	9.3e-59
BLAST match view associations BLAST with Hdac1 Hdac1 Hdac1 histone deacetylase 1	gene from Rattus norvegicus	1.2e-58
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase 8	protein from Homo sapiens	2.9e-58
BLAST match view associations BLAST with GSU1222 GSU1222 GSU1222 Histone deacetylase family protein	protein from Geobacter sulfurreducens PCA	1.4e-57
BLAST match view associations BLAST with GSU_1222 GSU_1222 GSU_1222 histone deacetylase/AcuC/AphA family protein	protein from Geobacter sulfurreducens PCA	1.4e-57
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase 8	protein from Homo sapiens	3.7e-55
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Uncharacterized protein	protein from Sus scrofa	6.1e-55
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase 2	protein from Homo sapiens	1.3e-54
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase 8	protein from Homo sapiens	3.4e-54
BLAST match view associations BLAST with HDAC1 HDAC1 HDAC1 Histone deacetylase 1	protein from Homo sapiens	6.0e-48
BLAST match view associations BLAST with HOS1 HOS1 HOS1 Class I histone deacetylase (HDAC) family member	gene from Saccharomyces cerevisiae	2.0e-47
BLAST match view associations BLAST with HOS1 HOS1 HOS1	gene_product from Candida albicans	3.3e-47
BLAST match view associations BLAST with HOS1 HOS1 HOS1 Likely histone deacetylase Hos1p	protein from Candida albicans SC5314	3.3e-47
BLAST match view associations BLAST with acuC acuC acuC Acetoin utilization protein AcuC	protein from Carboxydothermus hydrogenoformans Z-2901	3.6e-41
BLAST match view associations BLAST with CHY_0174 CHY_0174 CHY_0174 acetoin utilization protein AcuC	protein from Carboxydothermus hydrogenoformans Z-2901	3.6e-41
BLAST match view associations BLAST with acuC acuC acuC Acetoin utilization protein AcuC	protein from Bacillus anthracis	2.0e-40
BLAST match view associations BLAST with BA_4918 BA_4918 BA_4918 acetoin utilization protein AcuC	protein from Bacillus anthracis str. Ames	2.0e-40
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase 8	protein from Homo sapiens	7.2e-36
BLAST match view associations BLAST with SPO_2177 SPO_2177 SPO_2177 acetoin utilization protein AcuC	protein from Ruegeria pomeroyi DSS-3	1.9e-35
BLAST match view associations BLAST with HDAC3 HDAC3 HDAC3 Histone deacetylase 3	protein from Homo sapiens	4.1e-35
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase 8	protein from Homo sapiens	1.3e-34
BLAST match view associations BLAST with HDAC3 HDAC3 HDAC3 Uncharacterized protein	protein from Bos taurus	1.5e-33
BLAST match view associations BLAST with LOC100625846 LOC100625846 LOC100625846 Uncharacterized protein	protein from Sus scrofa	6.0e-32
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase 2	protein from Homo sapiens	3.1e-28
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase 2	protein from Homo sapiens	2.2e-27
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase 8	protein from Homo sapiens	2.8e-27
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase 2	protein from Homo sapiens	8.4e-26
BLAST match view associations BLAST with HDA1 HDA1 HDA1	gene_product from Candida albicans	1.0e-25
BLAST match view associations BLAST with HDA1 HDA1 HDA1 Likely class II histone deacetylase subunit Hda1p	protein from Candida albicans SC5314	1.0e-25
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase 2	protein from Homo sapiens	1.8e-24
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  014167
        (429 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2098115 - symbol:HDA9 "histone deacetylase 9" ...  2069  4.2e-214  1
UNIPROTKB|Q32PJ8 - symbol:HDAC1 "Histone deacetylase 1" s...  1454  6.5e-151  2
MGI|MGI:108086 - symbol:Hdac1 "histone deacetylase 1" spe...  1454  8.3e-151  2
RGD|619975 - symbol:Hdac1l "histone deacetylase 1-like" s...  1454  8.3e-151  2
UNIPROTKB|Q13547 - symbol:HDAC1 "Histone deacetylase 1" s...  1445  7.4e-150  2
UNIPROTKB|E2R692 - symbol:HDAC1 "Uncharacterized protein"...  1444  7.4e-150  2
UNIPROTKB|F6X8F5 - symbol:HDAC1 "Histone deacetylase" spe...  1444  7.4e-150  2
UNIPROTKB|J9NUI0 - symbol:HDAC1 "Histone deacetylase" spe...  1444  7.4e-150  2
UNIPROTKB|P56517 - symbol:HDAC1 "Histone deacetylase 1" s...  1456  3.8e-149  1
UNIPROTKB|I3LG31 - symbol:LOC100622482 "Histone deacetyla...  1423  1.2e-147  2
UNIPROTKB|P56518 - symbol:HDAC1 "Histone deacetylase 1" s...  1435  6.4e-147  1
ZFIN|ZDB-GENE-020419-32 - symbol:hdac1 "histone deacetyla...  1434  8.1e-147  1
DICTYBASE|DDB_G0268024 - symbol:hdaA "type-1 histone deac...  1432  1.3e-146  1
UNIPROTKB|F1NM39 - symbol:HDAC2 "Histone deacetylase" spe...  1429  2.8e-146  1
UNIPROTKB|J3KPW7 - symbol:HDAC2 "Histone deacetylase 2" s...  1429  2.8e-146  1
UNIPROTKB|Q92769 - symbol:HDAC2 "Histone deacetylase 2" s...  1429  2.8e-146  1
UNIPROTKB|F1RZK8 - symbol:HDAC2 "Histone deacetylase" spe...  1429  2.8e-146  1
MGI|MGI:1097691 - symbol:Hdac2 "histone deacetylase 2" sp...  1425  7.3e-146  1
UNIPROTKB|F1PR63 - symbol:HDAC2 "Histone deacetylase" spe...  1404  1.2e-143  1
FB|FBgn0015805 - symbol:Rpd3 "Rpd3" species:7227 "Drosoph...  1400  3.3e-143  1
UNIPROTKB|P56520 - symbol:HDAC3 "Histone deacetylase 3" s...  1387  7.8e-142  1
UNIPROTKB|P56519 - symbol:HDAC2 "Histone deacetylase 2" s...  1385  1.3e-141  1
UNIPROTKB|F1NH59 - symbol:HDAC3 "Histone deacetylase" spe...  1382  2.6e-141  1
MGI|MGI:1343091 - symbol:Hdac3 "histone deacetylase 3" sp...  1370  4.9e-140  1
RGD|619977 - symbol:Hdac3 "histone deacetylase 3" species...  1370  4.9e-140  1
UNIPROTKB|Q6P6W3 - symbol:Hdac3 "Histone deacetylase 3" s...  1370  4.9e-140  1
DICTYBASE|DDB_G0270338 - symbol:hdaB "type-1 histone deac...  1368  8.0e-140  1
UNIPROTKB|E2R792 - symbol:HDAC3 "Histone deacetylase" spe...  1367  1.0e-139  1
UNIPROTKB|O15379 - symbol:HDAC3 "Histone deacetylase 3" s...  1367  1.0e-139  1
UNIPROTKB|F2Z4Z6 - symbol:HDAC3 "Histone deacetylase" spe...  1367  1.0e-139  1
TAIR|locus:2120948 - symbol:HD1 "AT4G38130" species:3702 ...  1362  3.5e-139  1
ZFIN|ZDB-GENE-040426-847 - symbol:hdac3 "histone deacetyl...  1354  2.4e-138  1
FB|FBgn0025825 - symbol:Hdac3 "Histone deacetylase 3" spe...  1352  4.0e-138  1
CGD|CAL0005608 - symbol:RPD31 species:5476 "Candida albic...  1326  2.8e-137  2
UNIPROTKB|Q5ADP0 - symbol:RPD31 "Potential Sin3.Rpd3 hist...  1326  2.8e-137  2
UNIPROTKB|J9P9H5 - symbol:HDAC2 "Histone deacetylase" spe...  1344  2.8e-137  1
UNIPROTKB|B3KRS5 - symbol:HDAC2 "Histone deacetylase" spe...  1344  2.8e-137  1
ASPGD|ASPL0000073195 - symbol:rpdA species:162425 "Emeric...  1328  1.4e-135  1
WB|WBGene00001834 - symbol:hda-1 species:6239 "Caenorhabd...  1324  3.7e-135  1
UNIPROTKB|O17695 - symbol:hda-1 "Histone deacetylase 1" s...  1324  3.7e-135  1
UNIPROTKB|F1MFZ7 - symbol:HDAC2 "Histone deacetylase" spe...  1313  5.4e-134  1
SGD|S000005274 - symbol:RPD3 "Histone deacetylase" specie...  1286  3.9e-131  1
CGD|CAL0005111 - symbol:RPD3 species:5476 "Candida albica...  1285  5.0e-131  1
UNIPROTKB|Q5A209 - symbol:RPD3 "Histone deacetylase" spec...  1285  5.0e-131  1
WB|WBGene00001836 - symbol:hda-3 species:6239 "Caenorhabd...  1280  1.7e-130  1
POMBASE|SPBC36.05c - symbol:clr6 "histone deacetylase (cl...  1270  1.9e-129  1
TAIR|locus:2162017 - symbol:HDA6 "histone deacetylase 6" ...  1265  6.6e-129  1
UNIPROTKB|D4AEB0 - symbol:Hdac3 "Histone deacetylase" spe...  1258  3.6e-128  1
UNIPROTKB|F1M4V8 - symbol:F1M4V8 "Histone deacetylase" sp...  1229  4.3e-125  1
UNIPROTKB|F1SV89 - symbol:LOC100521667 "Histone deacetyla...  1170  6.6e-121  2
CGD|CAL0004384 - symbol:HOS2 species:5476 "Candida albica...  1177  1.4e-119  1
UNIPROTKB|Q5A839 - symbol:HOS2 "Histone deacetylase" spec...  1177  1.4e-119  1
POMBASE|SPAC3G9.07c - symbol:hos2 "histone deacetylase (c...  1158  1.4e-117  1
SGD|S000003162 - symbol:HOS2 "Histone deacetylase and sub...  1150  1.0e-116  1
ASPGD|ASPL0000013866 - symbol:hosA species:162425 "Emeric...  1062  2.1e-107  1
WB|WBGene00001835 - symbol:hda-2 species:6239 "Caenorhabd...  1060  3.5e-107  1
TAIR|locus:2157111 - symbol:HDA7 "histone deacetylase7" s...  1047  8.3e-106  1
UNIPROTKB|E7ESJ6 - symbol:HDAC3 "Histone deacetylase 3" s...   724  4.4e-86   2
ZFIN|ZDB-GENE-040426-2772 - symbol:hdac8 "histone deacety...   818  1.2e-80   1
UNIPROTKB|Q9BY41 - symbol:HDAC8 "Histone deacetylase 8" s...   804  4.7e-80   1
MGI|MGI:1917565 - symbol:Hdac8 "histone deacetylase 8" sp...   802  7.6e-80   1
RGD|1562895 - symbol:Hdac8 "histone deacetylase 8" specie...   802  7.6e-80   1
UNIPROTKB|G3MYR9 - symbol:HDAC8 "Histone deacetylase" spe...   798  2.0e-79   1
UNIPROTKB|J9P5B2 - symbol:HDAC8 "Histone deacetylase" spe...   797  2.6e-79   1
UNIPROTKB|F1NFY6 - symbol:HDAC8 "Histone deacetylase" spe...   790  1.4e-78   1
UNIPROTKB|Q0VCB2 - symbol:HDAC8 "Histone deacetylase 8" s...   789  1.8e-78   1
UNIPROTKB|E2RQK6 - symbol:HDAC8 "Histone deacetylase" spe...   776  4.3e-77   1
UNIPROTKB|F5GXM1 - symbol:HDAC1 "Histone deacetylase 1" s...   738  4.6e-73   1
TAIR|locus:2076053 - symbol:hda17 "histone deacetylase 17...   710  4.3e-70   1
UNIPROTKB|E7EVA8 - symbol:HDAC8 "Histone deacetylase 8" s...   381  3.7e-64   2
TAIR|locus:2098105 - symbol:hda10 "histone deacetylase 10...   603  9.3e-59   1
RGD|1309799 - symbol:Hdac1 "histone deacetylase 1" specie...   602  1.2e-58   1
UNIPROTKB|A6NGJ7 - symbol:HDAC8 "Histone deacetylase 8" s...   562  2.9e-58   2
UNIPROTKB|Q74DU3 - symbol:GSU1222 "Histone deacetylase fa...   592  1.4e-57   1
TIGR_CMR|GSU_1222 - symbol:GSU_1222 "histone deacetylase/...   592  1.4e-57   1
UNIPROTKB|A6NMT1 - symbol:HDAC8 "Histone deacetylase 8" s...   569  3.7e-55   1
UNIPROTKB|I3L5X0 - symbol:HDAC8 "Uncharacterized protein"...   567  6.1e-55   1
UNIPROTKB|H3BM24 - symbol:HDAC2 "Histone deacetylase 2" s...   564  1.3e-54   1
UNIPROTKB|E7ENE4 - symbol:HDAC8 "Histone deacetylase 8" s...   560  3.4e-54   1
UNIPROTKB|Q5TEE2 - symbol:HDAC1 "Histone deacetylase 1" s...   501  6.0e-48   1
SGD|S000006272 - symbol:HOS1 "Class I histone deacetylase...   455  2.0e-47   2
CGD|CAL0001747 - symbol:HOS1 species:5476 "Candida albica...   494  3.3e-47   1
UNIPROTKB|Q59Q78 - symbol:HOS1 "Likely histone deacetylas...   494  3.3e-47   1
UNIPROTKB|Q3AFN8 - symbol:acuC "Acetoin utilization prote...   437  3.6e-41   1
TIGR_CMR|CHY_0174 - symbol:CHY_0174 "acetoin utilization ...   437  3.6e-41   1
UNIPROTKB|Q81KS2 - symbol:acuC "Acetoin utilization prote...   430  2.0e-40   1
TIGR_CMR|BA_4918 - symbol:BA_4918 "acetoin utilization pr...   430  2.0e-40   1
UNIPROTKB|B4DQE7 - symbol:HDAC8 "cDNA FLJ58211, highly si...   387  7.2e-36   1
TIGR_CMR|SPO_2177 - symbol:SPO_2177 "acetoin utilization ...   383  1.9e-35   1
UNIPROTKB|E7EWI8 - symbol:HDAC3 "Histone deacetylase 3" s...   207  4.1e-35   2
UNIPROTKB|E7EW22 - symbol:HDAC8 "Histone deacetylase 8" s...   375  1.3e-34   1
UNIPROTKB|F1N0W0 - symbol:HDAC3 "Uncharacterized protein"...   365  1.5e-33   1
UNIPROTKB|F1RPM1 - symbol:LOC100625846 "Uncharacterized p...   350  6.0e-32   1
UNIPROTKB|E5RG37 - symbol:HDAC2 "Histone deacetylase 2" s...   315  3.1e-28   1
UNIPROTKB|E5RH52 - symbol:HDAC2 "Histone deacetylase 2" s...   307  2.2e-27   1
UNIPROTKB|C9J8F0 - symbol:HDAC8 "Histone deacetylase 8" s...   306  2.8e-27   1
UNIPROTKB|E5RFP9 - symbol:HDAC2 "Histone deacetylase 2" s...   292  8.4e-26   1
CGD|CAL0003359 - symbol:HDA1 species:5476 "Candida albica...   310  1.0e-25   1
UNIPROTKB|Q5A960 - symbol:HDA1 "Likely class II histone d...   310  1.0e-25   1
UNIPROTKB|E5RHE7 - symbol:HDAC2 "Histone deacetylase 2" s...   281  1.8e-24   1

WARNING:  Descriptions of 130 database sequences were not reported due to the
          limiting value of parameter V = 100.


>TAIR|locus:2098115 [details] [associations]
            symbol:HDA9 "histone deacetylase 9" species:3702
            "Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
            [GO:0016575 "histone deacetylation" evidence=IEA;ISS]
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005634 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
            GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
            GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
            EMBL:AL138652 HSSP:Q9BY41 OMA:RDDEYYE EMBL:BT002003 EMBL:BT006576
            IPI:IPI00530931 PIR:T47443 RefSeq:NP_190054.2 UniGene:At.36124
            ProteinModelPortal:Q8H0W2 SMR:Q8H0W2 PRIDE:Q8H0W2
            EnsemblPlants:AT3G44680.1 GeneID:823594 KEGG:ath:AT3G44680
            TAIR:At3g44680 InParanoid:Q8H0W2 PhylomeDB:Q8H0W2
            ProtClustDB:CLSN2680330 Genevestigator:Q8H0W2 Uniprot:Q8H0W2
        Length = 426

 Score = 2069 (733.4 bits), Expect = 4.2e-214, P = 4.2e-214
 Identities = 372/424 (87%), Positives = 403/424 (95%)

Query:     1 MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
             MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHL+L+Y LH KME+YRPHKAYP+E+
Sbjct:     1 MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLILAYGLHSKMEVYRPHKAYPIEM 60

Query:    61 AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
             AQFHS DYVEFL RI P+ Q+LF  E+ +YNLGEDCPVFE+LFEFCQ+YAGGTIDAARRL
Sbjct:    61 AQFHSPDYVEFLQRINPENQNLFPNEMARYNLGEDCPVFEDLFEFCQLYAGGTIDAARRL 120

Query:   121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
             NN+LCDIAINWAGGLHHAKKC+ASGFCYINDLVLGILELLK+H RVLYIDIDVHHGDGVE
Sbjct:   121 NNKLCDIAINWAGGLHHAKKCDASGFCYINDLVLGILELLKHHPRVLYIDIDVHHGDGVE 180

Query:   181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
             EAFYFTDRVMTVSFHKFGD FFPGTGDVKEIGEREGKFYAINVPLKDGIDD+SF RLF+T
Sbjct:   181 EAFYFTDRVMTVSFHKFGDKFFPGTGDVKEIGEREGKFYAINVPLKDGIDDSSFNRLFRT 240

Query:   241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
             IISKVVE Y PGAIVLQCGADSLA DRLGCFNLSIDGHAECV+FVKKFNLPLLVTGGGGY
Sbjct:   241 IISKVVEIYQPGAIVLQCGADSLARDRLGCFNLSIDGHAECVKFVKKFNLPLLVTGGGGY 300

Query:   301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIK 360
             TKENVARCWTVETGILLDTELPNEIPEN+YIKYFAP+ SL+IP GHIENLN+KSY+S+IK
Sbjct:   301 TKENVARCWTVETGILLDTELPNEIPENDYIKYFAPDFSLKIPGGHIENLNTKSYISSIK 360

Query:   361 MQVLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGD 420
             +Q+LENLR IQHAPSVQMQEVPPDFYIP+FDEDEQNPD R DQ ++DKQIQRDDE+++GD
Sbjct:   361 VQILENLRYIQHAPSVQMQEVPPDFYIPDFDEDEQNPDVRADQRSRDKQIQRDDEYFDGD 420

Query:   421 NDND 424
             NDND
Sbjct:   421 NDND 424


>UNIPROTKB|Q32PJ8 [details] [associations]
            symbol:HDAC1 "Histone deacetylase 1" species:9913 "Bos
            taurus" [GO:0060766 "negative regulation of androgen receptor
            signaling pathway" evidence=IEA] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0043922 "negative regulation by host of viral transcription"
            evidence=IEA] [GO:0042826 "histone deacetylase binding"
            evidence=IEA] [GO:0033613 "activating transcription factor binding"
            evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580
            "Sin3 complex" evidence=IEA] [GO:0010870 "positive regulation of
            receptor biosynthetic process" evidence=IEA] [GO:0008284 "positive
            regulation of cell proliferation" evidence=IEA] [GO:0005829
            "cytosol" evidence=IEA] [GO:0001106 "RNA polymerase II
            transcription corepressor activity" evidence=IEA] [GO:0001047 "core
            promoter binding" evidence=IEA] [GO:0097372 "NAD-dependent histone
            deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
            activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
            histone deacetylase activity (H3-K14 specific)" evidence=IEA]
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0008284 GO:GO:0045944
            GO:GO:0001047 GO:GO:0001106 GO:GO:0016581 GO:GO:0043922
            eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
            OMA:RISCDEE GO:GO:0016580 GO:GO:0060766 GO:GO:0010870 HSSP:Q9BY41
            GeneTree:ENSGT00530000062889 EMBL:BT030718 EMBL:BC108088
            IPI:IPI00707471 RefSeq:NP_001032521.1 UniGene:Bt.16500
            ProteinModelPortal:Q32PJ8 STRING:Q32PJ8 PRIDE:Q32PJ8
            Ensembl:ENSBTAT00000016877 GeneID:404126 KEGG:bta:404126 CTD:3065
            HOVERGEN:HBG057112 InParanoid:Q32PJ8 OrthoDB:EOG4868CH
            NextBio:20817564 ArrayExpress:Q32PJ8 Uniprot:Q32PJ8
        Length = 482

 Score = 1454 (516.9 bits), Expect = 6.5e-151, Sum P(2) = 6.5e-151
 Identities = 254/424 (59%), Positives = 334/424 (78%)

Query:     3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
             +K K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct:     7 TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query:    63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
             +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN 
Sbjct:    67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126

Query:   123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct:   127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query:   183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
             FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++
Sbjct:   187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245

Query:   243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT 
Sbjct:   246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305

Query:   303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQ 362
              NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I   ++ N N+  YL  IK +
Sbjct:   306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQR 365

Query:   363 VLENLRSIQHAPSVQMQEVPPDFYIPEF--DEDEQNPDERMDQHTQDKQIQRDDEFYEGD 420
             + ENLR + HAP VQMQ +P D  IPE   DEDE++PD+R+   + DK+I  ++EF + D
Sbjct:   366 LFENLRMLPHAPGVQMQAIPEDA-IPEESGDEDEEDPDKRISICSSDKRIACEEEFSDSD 424

Query:   421 NDND 424
              + +
Sbjct:   425 EEGE 428

 Score = 40 (19.1 bits), Expect = 6.5e-151, Sum P(2) = 6.5e-151
 Identities = 7/25 (28%), Positives = 15/25 (60%)

Query:   391 DEDEQNPDERMDQHTQDKQIQRDDE 415
             DE E++P+E+ +   ++K  +   E
Sbjct:   447 DEKEKDPEEKKEVTEEEKTKEEKQE 471


>MGI|MGI:108086 [details] [associations]
            symbol:Hdac1 "histone deacetylase 1" species:10090 "Mus
            musculus" [GO:0000118 "histone deacetylase complex"
            evidence=TAS;IPI] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0000785
            "chromatin" evidence=ISO] [GO:0000790 "nuclear chromatin"
            evidence=ISO;IDA] [GO:0000792 "heterochromatin" evidence=IDA]
            [GO:0001047 "core promoter binding" evidence=ISO] [GO:0001103 "RNA
            polymerase II repressing transcription factor binding"
            evidence=ISO;IPI] [GO:0001106 "RNA polymerase II transcription
            corepressor activity" evidence=ISO] [GO:0003677 "DNA binding"
            evidence=IDA] [GO:0003682 "chromatin binding" evidence=IDA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IDA] [GO:0003714 "transcription corepressor
            activity" evidence=IDA] [GO:0004407 "histone deacetylase activity"
            evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005654 "nucleoplasm"
            evidence=ISO] [GO:0005667 "transcription factor complex"
            evidence=IDA;IPI] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005829
            "cytosol" evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006476 "protein deacetylation"
            evidence=ISO] [GO:0007492 "endoderm development" evidence=IMP;IDA]
            [GO:0008134 "transcription factor binding" evidence=ISO;TAS]
            [GO:0008284 "positive regulation of cell proliferation"
            evidence=IGI;ISO] [GO:0008285 "negative regulation of cell
            proliferation" evidence=ISO] [GO:0009913 "epidermal cell
            differentiation" evidence=IGI] [GO:0010870 "positive regulation of
            receptor biosynthetic process" evidence=ISO] [GO:0016568 "chromatin
            modification" evidence=TAS] [GO:0016575 "histone deacetylation"
            evidence=ISO] [GO:0016580 "Sin3 complex" evidence=ISO] [GO:0016581
            "NuRD complex" evidence=ISO;IDA;IPI] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0017053 "transcriptional repressor
            complex" evidence=IPI] [GO:0019899 "enzyme binding" evidence=ISO]
            [GO:0021766 "hippocampus development" evidence=IGI] [GO:0030182
            "neuron differentiation" evidence=IGI] [GO:0031078 "histone
            deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032041
            "NAD-dependent histone deacetylase activity (H3-K14 specific)"
            evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
            specific)" evidence=IEA] [GO:0032403 "protein complex binding"
            evidence=ISO] [GO:0033558 "protein deacetylase activity"
            evidence=ISO] [GO:0033613 "activating transcription factor binding"
            evidence=ISO] [GO:0034599 "cellular response to oxidative stress"
            evidence=ISO] [GO:0034739 "histone deacetylase activity (H4-K16
            specific)" evidence=IEA] [GO:0042475 "odontogenesis of
            dentin-containing tooth" evidence=IGI] [GO:0042733 "embryonic digit
            morphogenesis" evidence=IGI] [GO:0042826 "histone deacetylase
            binding" evidence=ISO] [GO:0043025 "neuronal cell body"
            evidence=IDA] [GO:0043066 "negative regulation of apoptotic
            process" evidence=IGI] [GO:0043234 "protein complex"
            evidence=ISO;IDA] [GO:0043524 "negative regulation of neuron
            apoptotic process" evidence=ISO] [GO:0043922 "negative regulation
            by host of viral transcription" evidence=ISO] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=ISO;IDA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISO] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISO] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0048714 "positive
            regulation of oligodendrocyte differentiation" evidence=IGI]
            [GO:0060766 "negative regulation of androgen receptor signaling
            pathway" evidence=ISO] [GO:0060789 "hair follicle placode
            formation" evidence=IGI] [GO:0061029 "eyelid development in
            camera-type eye" evidence=IGI] [GO:0061198 "fungiform papilla
            formation" evidence=IGI] [GO:0070932 "histone H3 deacetylation"
            evidence=IEA;ISO] [GO:0070933 "histone H4 deacetylation"
            evidence=IEA;ISO] [GO:0090090 "negative regulation of canonical Wnt
            receptor signaling pathway" evidence=IGI] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 MGI:MGI:108086
            INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0021766
            GO:GO:0043066 GO:GO:0030182 GO:GO:0003677 GO:GO:0008284
            GO:GO:0043025 GO:GO:0003700 GO:GO:0006351 GO:GO:0003682
            GO:GO:0005667 GO:GO:0000122 GO:GO:0000790 GO:GO:0048714
            GO:GO:0042475 GO:GO:0090090 GO:GO:0008134 GO:GO:0042733
            GO:GO:0007492 GO:GO:0061029 GO:GO:0009913 GO:GO:0000792
            GO:GO:0070932 GO:GO:0070933 GO:GO:0016581 GO:GO:0060789
            eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
            OMA:RISCDEE GO:GO:0061198 GO:GO:0004407 CTD:3065 HOVERGEN:HBG057112
            OrthoDB:EOG4868CH EMBL:X98207 EMBL:U80780 IPI:IPI00114232
            RefSeq:NP_032254.1 UniGene:Mm.202504 UniGene:Mm.391033
            ProteinModelPortal:O09106 SMR:O09106 DIP:DIP-31499N IntAct:O09106
            MINT:MINT-2568222 STRING:O09106 PhosphoSite:O09106 PaxDb:O09106
            PRIDE:O09106 Ensembl:ENSMUST00000102597 GeneID:433759
            KEGG:mmu:433759 InParanoid:O09106 BindingDB:O09106
            ChEMBL:CHEMBL4001 NextBio:408961 Bgee:O09106 CleanEx:MM_HDAC1
            Genevestigator:O09106 GermOnline:ENSMUSG00000061062 Uniprot:O09106
        Length = 482

 Score = 1454 (516.9 bits), Expect = 8.3e-151, Sum P(2) = 8.3e-151
 Identities = 254/424 (59%), Positives = 334/424 (78%)

Query:     3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
             +K K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct:     7 TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query:    63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
             +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN 
Sbjct:    67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126

Query:   123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct:   127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query:   183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
             FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++
Sbjct:   187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245

Query:   243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT 
Sbjct:   246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305

Query:   303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQ 362
              NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I   ++ N N+  YL  IK +
Sbjct:   306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQR 365

Query:   363 VLENLRSIQHAPSVQMQEVPPDFYIPEF--DEDEQNPDERMDQHTQDKQIQRDDEFYEGD 420
             + ENLR + HAP VQMQ +P D  IPE   DEDE++PD+R+   + DK+I  ++EF + D
Sbjct:   366 LFENLRMLPHAPGVQMQAIPEDA-IPEESGDEDEEDPDKRISICSSDKRIACEEEFSDSD 424

Query:   421 NDND 424
              + +
Sbjct:   425 EEGE 428

 Score = 39 (18.8 bits), Expect = 8.3e-151, Sum P(2) = 8.3e-151
 Identities = 7/25 (28%), Positives = 15/25 (60%)

Query:   391 DEDEQNPDERMDQHTQDKQIQRDDE 415
             DE E++P+E+ +   ++K  +   E
Sbjct:   447 DEKEKDPEEKKEVTEEEKTKEEKPE 471


>RGD|619975 [details] [associations]
            symbol:Hdac1l "histone deacetylase 1-like" species:10116 "Rattus
            norvegicus" [GO:0003674 "molecular_function" evidence=ND]
            [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0008150
            "biological_process" evidence=ND] [GO:0032041 "NAD-dependent
            histone deacetylase activity (H3-K14 specific)" evidence=IEA]
            [GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
            specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
            deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
            Pfam:PF00850 RGD:619975 INTERPRO:IPR000286 Reactome:REACT_111984
            GO:GO:0005654 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
            GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
            GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
            HSSP:Q9BY41 GeneTree:ENSGT00530000062889 CTD:3065
            HOVERGEN:HBG057112 OrthoDB:EOG4868CH EMBL:BC097943 EMBL:BC107476
            IPI:IPI00364813 RefSeq:NP_001020580.1 UniGene:Rn.1863
            ProteinModelPortal:Q4QQW4 STRING:Q4QQW4 PhosphoSite:Q4QQW4
            PRIDE:Q4QQW4 Ensembl:ENSRNOT00000012854 GeneID:297893
            KEGG:rno:297893 UCSC:RGD:619975 InParanoid:Q4QQW4 BindingDB:Q4QQW4
            ChEMBL:CHEMBL2915 NextBio:642799 Genevestigator:Q4QQW4
            Uniprot:Q4QQW4
        Length = 482

 Score = 1454 (516.9 bits), Expect = 8.3e-151, Sum P(2) = 8.3e-151
 Identities = 254/424 (59%), Positives = 334/424 (78%)

Query:     3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
             +K K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct:     7 TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query:    63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
             +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN 
Sbjct:    67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126

Query:   123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct:   127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query:   183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
             FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++
Sbjct:   187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245

Query:   243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT 
Sbjct:   246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305

Query:   303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQ 362
              NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I   ++ N N+  YL  IK +
Sbjct:   306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQR 365

Query:   363 VLENLRSIQHAPSVQMQEVPPDFYIPEF--DEDEQNPDERMDQHTQDKQIQRDDEFYEGD 420
             + ENLR + HAP VQMQ +P D  IPE   DEDE++PD+R+   + DK+I  ++EF + D
Sbjct:   366 LFENLRMLPHAPGVQMQAIPEDA-IPEESGDEDEEDPDKRISICSSDKRIACEEEFSDSD 424

Query:   421 NDND 424
              + +
Sbjct:   425 EEGE 428

 Score = 39 (18.8 bits), Expect = 8.3e-151, Sum P(2) = 8.3e-151
 Identities = 7/25 (28%), Positives = 15/25 (60%)

Query:   391 DEDEQNPDERMDQHTQDKQIQRDDE 415
             DE E++P+E+ +   ++K  +   E
Sbjct:   447 DEKEKDPEEKKEVTEEEKTKEEKPE 471


>UNIPROTKB|Q13547 [details] [associations]
            symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
            sapiens" [GO:0019048 "virus-host interaction" evidence=IEA]
            [GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
            specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
            activity (H3-K18 specific)" evidence=IEA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0000118 "histone deacetylase complex"
            evidence=TAS] [GO:0004407 "histone deacetylase activity"
            evidence=IDA;IMP;TAS] [GO:0016568 "chromatin modification"
            evidence=TAS] [GO:0008134 "transcription factor binding"
            evidence=TAS;IPI] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005829
            "cytosol" evidence=IDA] [GO:0033558 "protein deacetylase activity"
            evidence=IDA;IMP] [GO:0019899 "enzyme binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0016575 "histone
            deacetylation" evidence=IMP] [GO:0016581 "NuRD complex"
            evidence=IDA] [GO:0043922 "negative regulation by host of viral
            transcription" evidence=IMP] [GO:0006476 "protein deacetylation"
            evidence=IDA] [GO:0033613 "activating transcription factor binding"
            evidence=IPI] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IMP] [GO:0001047 "core promoter binding"
            evidence=IDA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=TAS] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IDA;IMP;TAS] [GO:0000278 "mitotic cell cycle"
            evidence=TAS] [GO:0005654 "nucleoplasm" evidence=IDA;TAS]
            [GO:0006351 "transcription, DNA-dependent" evidence=TAS]
            [GO:0006367 "transcription initiation from RNA polymerase II
            promoter" evidence=TAS] [GO:0007179 "transforming growth factor
            beta receptor signaling pathway" evidence=TAS] [GO:0007219 "Notch
            signaling pathway" evidence=TAS] [GO:0007596 "blood coagulation"
            evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
            [GO:0045786 "negative regulation of cell cycle" evidence=TAS]
            [GO:0048011 "neurotrophin TRK receptor signaling pathway"
            evidence=TAS] [GO:0010832 "negative regulation of myotube
            differentiation" evidence=IMP] [GO:0070932 "histone H3
            deacetylation" evidence=IDA] [GO:0070933 "histone H4 deacetylation"
            evidence=IDA] [GO:0060766 "negative regulation of androgen receptor
            signaling pathway" evidence=IDA] [GO:0001106 "RNA polymerase II
            transcription corepressor activity" evidence=IDA] [GO:0000790
            "nuclear chromatin" evidence=IDA] [GO:0001103 "RNA polymerase II
            repressing transcription factor binding" evidence=IPI] [GO:0009913
            "epidermal cell differentiation" evidence=ISS] [GO:0042475
            "odontogenesis of dentin-containing tooth" evidence=ISS]
            [GO:0042733 "embryonic digit morphogenesis" evidence=ISS]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=ISS] [GO:0060789 "hair follicle placode formation"
            evidence=ISS] [GO:0061029 "eyelid development in camera-type eye"
            evidence=ISS] [GO:0061198 "fungiform papilla formation"
            evidence=ISS] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IMP] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0006338 "chromatin
            remodeling" evidence=IC] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0010870 "positive regulation of receptor biosynthetic process"
            evidence=IMP] [GO:0016580 "Sin3 complex" evidence=IDA] [GO:0042826
            "histone deacetylase binding" evidence=IPI] [GO:0005730 "nucleolus"
            evidence=IDA] Reactome:REACT_604 Reactome:REACT_71
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005829 Reactome:REACT_111102
            GO:GO:0048011 Pathway_Interaction_DB:telomerasepathway
            Reactome:REACT_115566 GO:GO:0019048 GO:GO:0043066
            Pathway_Interaction_DB:wnt_canonical_pathway
            Pathway_Interaction_DB:ps1pathway GO:GO:0007596 GO:GO:0008284
            GO:GO:0045944 GO:GO:0007219 GO:GO:0003700 GO:GO:0006338
            GO:GO:0007179 GO:GO:0042475 GO:GO:0001047 GO:GO:0008134
            Pathway_Interaction_DB:hedgehog_glipathway
            Pathway_Interaction_DB:smad2_3nuclearpathway
            Pathway_Interaction_DB:retinoic_acid_pathway GO:GO:0042733
            Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
            Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0001106
            GO:GO:0061029 GO:GO:0045786 GO:GO:0009913 GO:GO:0070932
            GO:GO:0000278 GO:GO:0070933 GO:GO:0016581 GO:GO:0043922
            GO:GO:0060789 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
            GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
            OMA:RISCDEE GO:GO:0016580 GO:GO:0061198 GO:GO:0060766 GO:GO:0010870
            GO:GO:0004407 CTD:3065 HOVERGEN:HBG057112 OrthoDB:EOG4868CH
            EMBL:U50079 EMBL:D50405 EMBL:BC000301 IPI:IPI00013774
            RefSeq:NP_004955.2 UniGene:Hs.88556 PDB:1TYI PDBsum:1TYI
            ProteinModelPortal:Q13547 SMR:Q13547 DIP:DIP-24184N IntAct:Q13547
            MINT:MINT-90475 STRING:Q13547 PhosphoSite:Q13547 DMDM:2498443
            PaxDb:Q13547 PeptideAtlas:Q13547 PRIDE:Q13547 DNASU:3065
            Ensembl:ENST00000373548 GeneID:3065 KEGG:hsa:3065 UCSC:uc001bvb.1
            GeneCards:GC01P032757 HGNC:HGNC:4852 HPA:CAB005017 HPA:HPA029693
            MIM:601241 neXtProt:NX_Q13547 PharmGKB:PA29226 InParanoid:Q13547
            PhylomeDB:Q13547 Pathway_Interaction_DB:ranbp2pathway
            SABIO-RK:Q13547 BindingDB:Q13547 ChEMBL:CHEMBL325 ChiTaRS:HDAC1
            DrugBank:DB02546 GenomeRNAi:3065 NextBio:12125 ArrayExpress:Q13547
            Bgee:Q13547 CleanEx:HS_HDAC1 Genevestigator:Q13547
            GermOnline:ENSG00000116478 Uniprot:Q13547
        Length = 482

 Score = 1445 (513.7 bits), Expect = 7.4e-150, Sum P(2) = 7.4e-150
 Identities = 252/424 (59%), Positives = 333/424 (78%)

Query:     3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
             ++ K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct:     7 TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query:    63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
             +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN 
Sbjct:    67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126

Query:   123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct:   127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query:   183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
             FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++
Sbjct:   187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245

Query:   243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT 
Sbjct:   246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305

Query:   303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQ 362
              NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I   ++ N N+  YL  IK +
Sbjct:   306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQR 365

Query:   363 VLENLRSIQHAPSVQMQEVPPDFYIPEF--DEDEQNPDERMDQHTQDKQIQRDDEFYEGD 420
             + ENLR + HAP VQMQ +P D  IPE   DEDE +PD+R+   + DK+I  ++EF + +
Sbjct:   366 LFENLRMLPHAPGVQMQAIPEDA-IPEESGDEDEDDPDKRISICSSDKRIACEEEFSDSE 424

Query:   421 NDND 424
              + +
Sbjct:   425 EEGE 428

 Score = 39 (18.8 bits), Expect = 7.4e-150, Sum P(2) = 7.4e-150
 Identities = 7/25 (28%), Positives = 15/25 (60%)

Query:   391 DEDEQNPDERMDQHTQDKQIQRDDE 415
             DE E++P+E+ +   ++K  +   E
Sbjct:   447 DEKEKDPEEKKEVTEEEKTKEEKPE 471


>UNIPROTKB|E2R692 [details] [associations]
            symbol:HDAC1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0004407 "histone deacetylase activity"
            evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
            Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            Ensembl:ENSCAFT00000016879 Uniprot:E2R692
        Length = 487

 Score = 1444 (513.4 bits), Expect = 7.4e-150, Sum P(2) = 7.4e-150
 Identities = 253/425 (59%), Positives = 335/425 (78%)

Query:     3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
             ++ K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct:     7 TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query:    63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
             +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN 
Sbjct:    67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126

Query:   123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct:   127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query:   183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
             FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++
Sbjct:   187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245

Query:   243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSI-DGHAECVRFVKKFNLPLLVTGGGGYT 301
             SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I +GHA+CV FVK FNLP+L+ GGGGYT
Sbjct:   246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKEGHAKCVEFVKSFNLPMLMLGGGGYT 305

Query:   302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKM 361
               NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I   ++ N N+  YL  IK 
Sbjct:   306 IRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQ 365

Query:   362 QVLENLRSIQHAPSVQMQEVPPDFYIPEF--DEDEQNPDERMDQHTQDKQIQRDDEFYEG 419
             ++ ENLR + HAP VQMQ +P D  IPE   DEDE++PD+R+   + DK+I  ++EF + 
Sbjct:   366 RLFENLRMLPHAPGVQMQVIPEDA-IPEESGDEDEEDPDKRISICSSDKRIACEEEFSDS 424

Query:   420 DNDND 424
             D + +
Sbjct:   425 DEEGE 429

 Score = 40 (19.1 bits), Expect = 7.4e-150, Sum P(2) = 7.4e-150
 Identities = 7/25 (28%), Positives = 15/25 (60%)

Query:   391 DEDEQNPDERMDQHTQDKQIQRDDE 415
             DE E++P+E+ +   ++K  +   E
Sbjct:   448 DEKEKDPEEKKEVTEEEKTKEEKQE 472


>UNIPROTKB|F6X8F5 [details] [associations]
            symbol:HDAC1 "Histone deacetylase" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
            of transcription, DNA-dependent" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
            GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
            EMBL:AAEX03001657 Ensembl:ENSCAFT00000016879 Uniprot:F6X8F5
        Length = 483

 Score = 1444 (513.4 bits), Expect = 7.4e-150, Sum P(2) = 7.4e-150
 Identities = 253/425 (59%), Positives = 335/425 (78%)

Query:     3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
             ++ K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct:     7 TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query:    63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
             +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN 
Sbjct:    67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126

Query:   123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct:   127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query:   183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
             FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++
Sbjct:   187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245

Query:   243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSI-DGHAECVRFVKKFNLPLLVTGGGGYT 301
             SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I +GHA+CV FVK FNLP+L+ GGGGYT
Sbjct:   246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKEGHAKCVEFVKSFNLPMLMLGGGGYT 305

Query:   302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKM 361
               NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I   ++ N N+  YL  IK 
Sbjct:   306 IRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQ 365

Query:   362 QVLENLRSIQHAPSVQMQEVPPDFYIPEF--DEDEQNPDERMDQHTQDKQIQRDDEFYEG 419
             ++ ENLR + HAP VQMQ +P D  IPE   DEDE++PD+R+   + DK+I  ++EF + 
Sbjct:   366 RLFENLRMLPHAPGVQMQVIPEDA-IPEESGDEDEEDPDKRISICSSDKRIACEEEFSDS 424

Query:   420 DNDND 424
             D + +
Sbjct:   425 DEEGE 429

 Score = 40 (19.1 bits), Expect = 7.4e-150, Sum P(2) = 7.4e-150
 Identities = 7/25 (28%), Positives = 15/25 (60%)

Query:   391 DEDEQNPDERMDQHTQDKQIQRDDE 415
             DE E++P+E+ +   ++K  +   E
Sbjct:   448 DEKEKDPEEKKEVTEEEKTKEEKQE 472


>UNIPROTKB|J9NUI0 [details] [associations]
            symbol:HDAC1 "Histone deacetylase" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
            of transcription, DNA-dependent" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
            GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 OMA:RISCDEE
            GeneTree:ENSGT00530000062889 EMBL:AAEX03001657
            Ensembl:ENSCAFT00000044286 Uniprot:J9NUI0
        Length = 489

 Score = 1444 (513.4 bits), Expect = 7.4e-150, Sum P(2) = 7.4e-150
 Identities = 253/425 (59%), Positives = 335/425 (78%)

Query:     3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
             ++ K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct:     7 TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query:    63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
             +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++ +A +LN 
Sbjct:    67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126

Query:   123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct:   127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query:   183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
             FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++
Sbjct:   187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245

Query:   243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSI-DGHAECVRFVKKFNLPLLVTGGGGYT 301
             SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I +GHA+CV FVK FNLP+L+ GGGGYT
Sbjct:   246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKEGHAKCVEFVKSFNLPMLMLGGGGYT 305

Query:   302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKM 361
               NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I   ++ N N+  YL  IK 
Sbjct:   306 IRNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQ 365

Query:   362 QVLENLRSIQHAPSVQMQEVPPDFYIPEF--DEDEQNPDERMDQHTQDKQIQRDDEFYEG 419
             ++ ENLR + HAP VQMQ +P D  IPE   DEDE++PD+R+   + DK+I  ++EF + 
Sbjct:   366 RLFENLRMLPHAPGVQMQVIPEDA-IPEESGDEDEEDPDKRISICSSDKRIACEEEFSDS 424

Query:   420 DNDND 424
             D + +
Sbjct:   425 DEEGE 429

 Score = 40 (19.1 bits), Expect = 7.4e-150, Sum P(2) = 7.4e-150
 Identities = 7/25 (28%), Positives = 15/25 (60%)

Query:   391 DEDEQNPDERMDQHTQDKQIQRDDE 415
             DE E++P+E+ +   ++K  +   E
Sbjct:   448 DEKEKDPEEKKEVTEEEKTKEEKQE 472


>UNIPROTKB|P56517 [details] [associations]
            symbol:HDAC1 "Histone deacetylase 1" species:9031 "Gallus
            gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
            (H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
            activity (H3-K18 specific)" evidence=IEA] [GO:0000118 "histone
            deacetylase complex" evidence=TAS] [GO:0004407 "histone deacetylase
            activity" evidence=TAS] [GO:0016568 "chromatin modification"
            evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
            "cytoplasm" evidence=TAS] [GO:0001047 "core promoter binding"
            evidence=IEA] [GO:0001106 "RNA polymerase II transcription
            corepressor activity" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0010870 "positive regulation of
            receptor biosynthetic process" evidence=IEA] [GO:0016580 "Sin3
            complex" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
            [GO:0033613 "activating transcription factor binding" evidence=IEA]
            [GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043922
            "negative regulation by host of viral transcription" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0060766 "negative
            regulation of androgen receptor signaling pathway" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=TAS]
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005737 GO:GO:0008284
            GO:GO:0045944 GO:GO:0001047 GO:GO:0008134 GO:GO:0001106
            GO:GO:0016581 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            HOGENOM:HOG000225180 KO:K06067 OMA:RISCDEE GO:GO:0016580
            GO:GO:0060766 GO:GO:0010870 BRENDA:3.5.1.98 GO:GO:0004407
            GeneTree:ENSGT00530000062889 CTD:3065 HOVERGEN:HBG057112
            OrthoDB:EOG4868CH EMBL:AF039751 EMBL:AF043328 EMBL:AF044169
            IPI:IPI00581674 RefSeq:NP_989487.1 UniGene:Gga.10603
            ProteinModelPortal:P56517 STRING:P56517 PRIDE:P56517
            Ensembl:ENSGALT00000005221 GeneID:373961 KEGG:gga:373961
            InParanoid:P56517 BindingDB:P56517 ChEMBL:CHEMBL4582
            NextBio:20813492 Uniprot:P56517
        Length = 480

 Score = 1456 (517.6 bits), Expect = 3.8e-149, P = 3.8e-149
 Identities = 252/423 (59%), Positives = 334/423 (78%)

Query:     3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
             +K K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct:     7 TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query:    63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
             +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+ AGG++ +A +LN 
Sbjct:    67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNK 126

Query:   123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct:   127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186

Query:   183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
             FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK +I
Sbjct:   187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVI 245

Query:   243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             SKV+ET+ P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT 
Sbjct:   246 SKVMETFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305

Query:   303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQ 362
              NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I   ++ N N+  YL  IK +
Sbjct:   306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQR 365

Query:   363 VLENLRSIQHAPSVQMQEVPPDFYIPEF-DEDEQNPDERMDQHTQDKQIQRDDEFYEGDN 421
             + ENLR + HAP VQMQ +P D    +  DE+E++P++R+     DK+I  D+EF + ++
Sbjct:   366 LFENLRMLPHAPGVQMQPIPEDAVQEDSGDEEEEDPEKRISIRNSDKRISCDEEFSDSED 425

Query:   422 DND 424
             + +
Sbjct:   426 EGE 428


>UNIPROTKB|I3LG31 [details] [associations]
            symbol:LOC100622482 "Histone deacetylase" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
            of transcription, DNA-dependent" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
            GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
            EMBL:FP326680 Ensembl:ENSSSCT00000031279 OMA:RAWTIAW Uniprot:I3LG31
        Length = 489

 Score = 1423 (506.0 bits), Expect = 1.2e-147, Sum P(2) = 1.2e-147
 Identities = 253/424 (59%), Positives = 330/424 (77%)

Query:     6 KISYFYD-GDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFH 64
             K+  FY  GDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++H
Sbjct:    14 KLPLFYSSGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTKYH 73

Query:    65 SADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAAR--RLNN 122
             S DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+ AGG++  A   +LN 
Sbjct:    74 SDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVGPASAVKLNK 133

Query:   123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             Q  DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct:   134 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 193

Query:   183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
             FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++
Sbjct:   194 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 252

Query:   243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT 
Sbjct:   253 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 312

Query:   303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQ 362
              NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L I   ++ N N+  YL  IK +
Sbjct:   313 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQR 372

Query:   363 VLENLRSIQHAPSVQMQEVPPDFYIPEF--DEDEQNPDERMDQHTQDKQIQRDDEFYEGD 420
             + ENLR + HAP VQMQ +P D  IPE   DEDE++PD+R+   + DK+I  ++EF + D
Sbjct:   373 LFENLRMLPHAPGVQMQAIPEDA-IPEESGDEDEEDPDKRISICSSDKRIACEEEFSDSD 431

Query:   421 NDND 424
              + +
Sbjct:   432 EEGE 435

 Score = 40 (19.1 bits), Expect = 1.2e-147, Sum P(2) = 1.2e-147
 Identities = 7/25 (28%), Positives = 15/25 (60%)

Query:   391 DEDEQNPDERMDQHTQDKQIQRDDE 415
             DE E++P+E+ +   ++K  +   E
Sbjct:   454 DEKEKDPEEKKEVTEEEKTKEEKQE 478


>UNIPROTKB|P56518 [details] [associations]
            symbol:HDAC1 "Histone deacetylase 1" species:7668
            "Strongylocentrotus purpuratus" [GO:0000118 "histone deacetylase
            complex" evidence=TAS] [GO:0004407 "histone deacetylase activity"
            evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
            "cytoplasm" evidence=TAS] [GO:0008134 "transcription factor
            binding" evidence=TAS] [GO:0016568 "chromatin modification"
            evidence=TAS] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
            GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
            GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
            GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
            GO:GO:0004407 OMA:WFGGPLL CTD:3065 EMBL:AF032919 RefSeq:NP_999711.1
            UniGene:Spu.26231 ProteinModelPortal:P56518 STRING:P56518
            PRIDE:P56518 EnsemblMetazoa:SPU_008768tr GeneID:373339
            KEGG:spu:373339 InParanoid:P56518 Uniprot:P56518
        Length = 576

 Score = 1435 (510.2 bits), Expect = 6.4e-147, P = 6.4e-147
 Identities = 253/424 (59%), Positives = 331/424 (78%)

Query:     3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
             +K ++ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct:     6 TKKRVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLILNYGLYRKMEIYRPHKAVMEEMTK 65

Query:    63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
             +HS DYV+FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+ +GG++  A +LN 
Sbjct:    66 YHSDDYVKFLRTIRPDNMSEYTKQMQRFNVGEDCPVFDGLYEFCQLSSGGSVAGAVKLNK 125

Query:   123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             Q  DIAINWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct:   126 QQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 185

Query:   183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
             FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+ ++FK I+
Sbjct:   186 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYDKIFKPIM 244

Query:   243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
              KV+E Y P AI LQCGADSL+GDRLGCFNL++ GHA+CV F+K++NLPLL+ GGGGYT 
Sbjct:   245 CKVMEMYQPSAICLQCGADSLSGDRLGCFNLTLKGHAKCVEFMKQYNLPLLLMGGGGYTI 304

Query:   303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQ 362
              NVARCWT ET   L  E+ NE+P N+Y +YF P+  L I   ++ N N+  YL  IK +
Sbjct:   305 RNVARCWTYETSTALGVEIANELPYNDYFEYFGPDFKLHISPSNMTNQNTGEYLDKIKTR 364

Query:   363 VLENLRSIQHAPSVQMQEVPPDFYIPEFD-EDE-QNPDERMDQHTQDKQIQRDDEFYEGD 420
             + EN+R I HAP VQMQ +P D    + D EDE +NPD+R+    QDK+IQRDDEF + +
Sbjct:   365 LYENMRMIPHAPGVQMQPIPEDAIPDDSDAEDEAENPDKRISIMAQDKRIQRDDEFSDSE 424

Query:   421 NDND 424
             ++ +
Sbjct:   425 DEGE 428


>ZFIN|ZDB-GENE-020419-32 [details] [associations]
            symbol:hdac1 "histone deacetylase 1" species:7955
            "Danio rerio" [GO:0004407 "histone deacetylase activity"
            evidence=IEA] [GO:0016575 "histone deacetylation" evidence=IEA;ISS]
            [GO:0030318 "melanocyte differentiation" evidence=IMP] [GO:0005634
            "nucleus" evidence=IEA] [GO:0032129 "histone deacetylase activity
            (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
            deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0031078
            "histone deacetylase activity (H3-K14 specific)" evidence=IEA]
            [GO:0034739 "histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0060218 "hematopoietic stem cell differentiation"
            evidence=IMP] [GO:0060028 "convergent extension involved in axis
            elongation" evidence=IMP] [GO:0001764 "neuron migration"
            evidence=IMP] [GO:0021754 "facial nucleus development"
            evidence=IMP] [GO:0031017 "exocrine pancreas development"
            evidence=IMP] [GO:0001889 "liver development" evidence=IMP]
            [GO:0048565 "digestive tract development" evidence=IMP] [GO:0008285
            "negative regulation of cell proliferation" evidence=IMP]
            [GO:0016055 "Wnt receptor signaling pathway" evidence=IGI]
            [GO:0016568 "chromatin modification" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0050769 "positive regulation of
            neurogenesis" evidence=IMP] [GO:0048709 "oligodendrocyte
            differentiation" evidence=IMP] [GO:0021903 "rostrocaudal neural
            tube patterning" evidence=IMP] [GO:0048263 "determination of dorsal
            identity" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
            PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            ZFIN:ZDB-GENE-020419-32 GO:GO:0005634 GO:GO:0001764 GO:GO:0008285
            GO:GO:0006355 GO:GO:0016055 GO:GO:0001889 GO:GO:0006351
            GO:GO:0060218 GO:GO:0050769 GO:GO:0048565 GO:GO:0030318
            GO:GO:0048709 GO:GO:0070932 GO:GO:0070933 GO:GO:0021903
            GO:GO:0060028 GO:GO:0031017 GO:GO:0048263 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
            GO:GO:0021754 CTD:3065 HOVERGEN:HBG057112 HSSP:O67135 EMBL:AF506201
            IPI:IPI00503694 RefSeq:NP_775343.1 UniGene:Dr.31752
            ProteinModelPortal:Q8JIY7 STRING:Q8JIY7 PRIDE:Q8JIY7 GeneID:192302
            KEGG:dre:192302 InParanoid:Q8JIY7 NextBio:20797143
            ArrayExpress:Q8JIY7 Bgee:Q8JIY7 Uniprot:Q8JIY7
        Length = 480

 Score = 1434 (509.9 bits), Expect = 8.1e-147, P = 8.1e-147
 Identities = 249/420 (59%), Positives = 328/420 (78%)

Query:     3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
             +K K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct:     8 TKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 67

Query:    63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
             +HS DY++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN 
Sbjct:    68 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNK 127

Query:   123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             Q  DIAINWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct:   128 QQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 187

Query:   183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
             FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK I+
Sbjct:   188 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPIM 246

Query:   243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             SKV+E Y P A+VLQCGADSL+GDRLGCFNL+I GHA+CV ++K FNLPLL+ GGGGYT 
Sbjct:   247 SKVMEMYQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEYMKSFNLPLLMLGGGGYTI 306

Query:   303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQ 362
             +NVARCWT ET + LD+ +PNE+P N+Y +YF P+  L I   ++ N N+  YL  IK +
Sbjct:   307 KNVARCWTFETAVALDSTIPNELPYNDYFEYFGPDFKLHISPFNMTNQNTNDYLEKIKQR 366

Query:   363 VLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDND 422
             + ENLR + HAP VQMQ +P D    +  ++E +PD+R+     DK+I  D+EF + +++
Sbjct:   367 LFENLRMLPHAPGVQMQAIPEDAVQEDSGDEEDDPDKRISIRAHDKRIACDEEFSDSEDE 426


>DICTYBASE|DDB_G0268024 [details] [associations]
            symbol:hdaA "type-1 histone deacetylase"
            species:44689 "Dictyostelium discoideum" [GO:0016575 "histone
            deacetylation" evidence=IEA] [GO:0004407 "histone deacetylase
            activity" evidence=IEA] [GO:0097372 "NAD-dependent histone
            deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
            "histone H4 deacetylation" evidence=IEA] [GO:0070932 "histone H3
            deacetylation" evidence=IEA] [GO:0046970 "NAD-dependent histone
            deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
            specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
            (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
            deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
            "histone deacetylase activity (H3-K14 specific)" evidence=IEA]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
            modification" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
            dictyBase:DDB_G0268024 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000150_GR GO:GO:0006355
            GO:GO:0046872 EMBL:AAFI02000003 GO:GO:0006351 GO:GO:0070932
            GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
            GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067 HSSP:Q9BY41
            RefSeq:XP_647498.1 ProteinModelPortal:Q55FN5 STRING:Q55FN5
            EnsemblProtists:DDB0234190 GeneID:8616305 KEGG:ddi:DDB_G0268024
            OMA:WFGGPLL ProtClustDB:CLSZ2431548 Uniprot:Q55FN5
        Length = 495

 Score = 1432 (509.1 bits), Expect = 1.3e-146, P = 1.3e-146
 Identities = 247/421 (58%), Positives = 331/421 (78%)

Query:     3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
             S  K+SYFYD +VG+ Y+GPNHPMKPHR+ MTH LVL+Y ++KKM+I+RP KA  +EL  
Sbjct:     2 STRKVSYFYDNEVGNHYYGPNHPMKPHRMRMTHDLVLNYGIYKKMQIFRPRKASELELTN 61

Query:    63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
             FHS DY+ FL  +TPD  H + ++L K+N+ EDCPVF+ ++ FCQI +GG+I  A ++N+
Sbjct:    62 FHSDDYINFLKLVTPDNMHDYSKQLVKFNVREDCPVFDGMYNFCQISSGGSIGCAVKVNS 121

Query:   123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             +  D+AINWAGGLHHAKK EASGFCY ND+VL ILELLK+H RVLYIDID+HHGDGVEEA
Sbjct:   122 KESDVAINWAGGLHHAKKSEASGFCYTNDIVLSILELLKHHERVLYIDIDIHHGDGVEEA 181

Query:   183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
             FY TDRVMTVSFHK+GD +FPGTGDVK+IG  +GK+Y++N PLKDGIDD S+  +F+ II
Sbjct:   182 FYTTDRVMTVSFHKYGD-YFPGTGDVKDIGADKGKYYSLNFPLKDGIDDESYQSIFRPII 240

Query:   243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
               V++ Y PGA+V+QCGADSL GDRLGCFNL++ GHA+C+ F+K FN+PL+V GGGGYT 
Sbjct:   241 RSVMDFYRPGAVVIQCGADSLTGDRLGCFNLTLRGHAQCIEFLKSFNVPLVVLGGGGYTI 300

Query:   303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQ 362
             +NVARCWT ET IL+D+EL +E+P N+Y++Y+ PE  L I   ++EN N+K YL  +K+Q
Sbjct:   301 KNVARCWTYETSILVDSELKDELPYNDYLEYYGPEYRLHITPNNMENQNTKDYLEKLKIQ 360

Query:   363 VLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDND 422
             +LENLR++ HAP+    ++PPD +    DED+++PD R+ +  +DK++    E  + D +
Sbjct:   361 LLENLRNLNHAPAAAHHDIPPDSFNYSDDEDDEDPDVRISEADRDKKVHHQGELSDSDEE 420

Query:   423 N 423
             +
Sbjct:   421 D 421


>UNIPROTKB|F1NM39 [details] [associations]
            symbol:HDAC2 "Histone deacetylase" species:9031 "Gallus
            gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
            specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
            activity (H3-K18 specific)" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] [GO:0008284 "positive
            regulation of cell proliferation" evidence=IEA] [GO:0009913
            "epidermal cell differentiation" evidence=IEA] [GO:0010870
            "positive regulation of receptor biosynthetic process"
            evidence=IEA] [GO:0010977 "negative regulation of neuron projection
            development" evidence=IEA] [GO:0016358 "dendrite development"
            evidence=IEA] [GO:0016580 "Sin3 complex" evidence=IEA] [GO:0016581
            "NuRD complex" evidence=IEA] [GO:0019899 "enzyme binding"
            evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
            [GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0035098
            "ESC/E(Z) complex" evidence=IEA] [GO:0042475 "odontogenesis of
            dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
            morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
            apoptotic process" evidence=IEA] [GO:0043433 "negative regulation
            of sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0045862 "positive regulation of proteolysis"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0048714
            "positive regulation of oligodendrocyte differentiation"
            evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0060789 "hair follicle placode formation" evidence=IEA]
            [GO:0061029 "eyelid development in camera-type eye" evidence=IEA]
            [GO:0061198 "fungiform papilla formation" evidence=IEA] [GO:0090090
            "negative regulation of canonical Wnt receptor signaling pathway"
            evidence=IEA] [GO:0090311 "regulation of protein deacetylation"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0000792
            "heterochromatin" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0005657
            "replication fork" evidence=IEA] [GO:0005667 "transcription factor
            complex" evidence=IEA] [GO:0006344 "maintenance of chromatin
            silencing" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
            PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0043066
            GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
            GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 GO:GO:0035098
            GO:GO:0043433 GO:GO:0090090 GO:GO:0045862 GO:GO:0031490
            GO:GO:0000792 GO:GO:0070932 GO:GO:0070933 GO:GO:0005657
            GO:GO:0016581 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0016580 GO:GO:0006344
            GO:GO:0010870 OMA:WFGGPLL GeneTree:ENSGT00530000062889
            IPI:IPI00596260 EMBL:AADN02002022 EMBL:AADN02002023
            EMBL:AADN02002024 EMBL:AADN02002025 Ensembl:ENSGALT00000024179
            Uniprot:F1NM39
        Length = 488

 Score = 1429 (508.1 bits), Expect = 2.8e-146, P = 2.8e-146
 Identities = 247/422 (58%), Positives = 328/422 (77%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
             K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct:     9 KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68

Query:    64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
             HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct:    69 HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128

Query:   124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
               D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct:   129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188

Query:   184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
             Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct:   189 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 247

Query:   244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
             KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  
Sbjct:   248 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 307

Query:   304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQV 363
             NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ N N+  Y+  IK ++
Sbjct:   308 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRL 367

Query:   364 LENLRSIQHAPSVQMQEVPPD-FYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDND 422
              ENLR + HAP VQMQ +P D  +    DED ++PD+R+     DK+I  D+EF + +++
Sbjct:   368 FENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDE 427

Query:   423 ND 424
              +
Sbjct:   428 GE 429


>UNIPROTKB|J3KPW7 [details] [associations]
            symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 OMA:WFGGPLL
            EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
            ProteinModelPortal:J3KPW7 Ensembl:ENST00000398283 Uniprot:J3KPW7
        Length = 582

 Score = 1429 (508.1 bits), Expect = 2.8e-146, P = 2.8e-146
 Identities = 247/422 (58%), Positives = 328/422 (77%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
             K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct:   103 KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 162

Query:    64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
             HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct:   163 HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 222

Query:   124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
               D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct:   223 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 282

Query:   184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
             Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct:   283 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 341

Query:   244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
             KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  
Sbjct:   342 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 401

Query:   304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQV 363
             NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ N N+  Y+  IK ++
Sbjct:   402 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRL 461

Query:   364 LENLRSIQHAPSVQMQEVPPD-FYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDND 422
              ENLR + HAP VQMQ +P D  +    DED ++PD+R+     DK+I  D+EF + +++
Sbjct:   462 FENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDE 521

Query:   423 ND 424
              +
Sbjct:   522 GE 523


>UNIPROTKB|Q92769 [details] [associations]
            symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
            sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
            specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
            activity (H3-K18 specific)" evidence=IEA] [GO:0000792
            "heterochromatin" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0005657
            "replication fork" evidence=IEA] [GO:0005667 "transcription factor
            complex" evidence=IEA] [GO:0021766 "hippocampus development"
            evidence=IEA] [GO:0031490 "chromatin DNA binding" evidence=IEA]
            [GO:0048714 "positive regulation of oligodendrocyte
            differentiation" evidence=IEA] [GO:0051091 "positive regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
            receptor signaling pathway" evidence=IEA] [GO:0090311 "regulation
            of protein deacetylation" evidence=IEA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=TAS]
            [GO:0019899 "enzyme binding" evidence=IPI] [GO:0016581 "NuRD
            complex" evidence=IDA] [GO:0003682 "chromatin binding"
            evidence=ISS] [GO:0016358 "dendrite development" evidence=ISS]
            [GO:0035098 "ESC/E(Z) complex" evidence=IDA] [GO:0016580 "Sin3
            complex" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
            [GO:0007596 "blood coagulation" evidence=TAS] [GO:0045786 "negative
            regulation of cell cycle" evidence=TAS] [GO:0048011 "neurotrophin
            TRK receptor signaling pathway" evidence=TAS] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IC;IMP]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IMP] [GO:0016575 "histone
            deacetylation" evidence=IMP] [GO:0006344 "maintenance of chromatin
            silencing" evidence=IMP] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            [GO:0001103 "RNA polymerase II repressing transcription factor
            binding" evidence=IPI] [GO:0009913 "epidermal cell differentiation"
            evidence=ISS] [GO:0010977 "negative regulation of neuron projection
            development" evidence=ISS] [GO:0042475 "odontogenesis of
            dentin-containing tooth" evidence=ISS] [GO:0042733 "embryonic digit
            morphogenesis" evidence=ISS] [GO:0043066 "negative regulation of
            apoptotic process" evidence=ISS] [GO:0060789 "hair follicle placode
            formation" evidence=ISS] [GO:0061029 "eyelid development in
            camera-type eye" evidence=ISS] [GO:0061198 "fungiform papilla
            formation" evidence=ISS] [GO:0033558 "protein deacetylase activity"
            evidence=IMP] [GO:0045347 "negative regulation of MHC class II
            biosynthetic process" evidence=IC] [GO:0032967 "positive regulation
            of collagen biosynthetic process" evidence=IC] [GO:0043433
            "negative regulation of sequence-specific DNA binding transcription
            factor activity" evidence=IMP] [GO:0045862 "positive regulation of
            proteolysis" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0008284 "positive regulation of cell proliferation"
            evidence=IMP] [GO:0010870 "positive regulation of receptor
            biosynthetic process" evidence=IMP] [GO:0006338 "chromatin
            remodeling" evidence=IC] [GO:0008134 "transcription factor binding"
            evidence=IPI] [GO:0004407 "histone deacetylase activity"
            evidence=IDA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IC] Reactome:REACT_604 InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005737 Reactome:REACT_111102 GO:GO:0048011 GO:GO:0021766
            Pathway_Interaction_DB:telomerasepathway GO:GO:0043066
            GO:GO:0007596 GO:GO:0008284 EMBL:CH471051 GO:GO:0043565
            GO:GO:0032967 GO:GO:0045944 GO:GO:0016358 GO:GO:0003700
            GO:GO:0006351 GO:GO:0003682 GO:GO:0005667 GO:GO:0006338
            GO:GO:0000122 GO:GO:0048714 GO:GO:0042475 GO:GO:0035098
            GO:GO:0043433 GO:GO:0090090 GO:GO:0045862
            Pathway_Interaction_DB:hedgehog_glipathway
            Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0042733
            Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0061029
            GO:GO:0031490 GO:GO:0045786 GO:GO:0009913 GO:GO:0000792
            GO:GO:0070932 GO:GO:0070933 GO:GO:0005657 GO:GO:0016581
            GO:GO:0060789 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
            GO:GO:0016580 GO:GO:0010977 GO:GO:0061198 GO:GO:0006344
            GO:GO:0010870 GO:GO:0004407 HOVERGEN:HBG057112 OrthoDB:EOG4868CH
            DrugBank:DB02546 CTD:3066 EMBL:U31814 EMBL:AK296856 EMBL:AL590398
            EMBL:AL671967 EMBL:BC031055 IPI:IPI00289601 RefSeq:NP_001518.3
            UniGene:Hs.3352 PDB:3MAX PDBsum:3MAX ProteinModelPortal:Q92769
            SMR:Q92769 DIP:DIP-24220N IntAct:Q92769 MINT:MINT-90593
            STRING:Q92769 PhosphoSite:Q92769 DMDM:68068066 PRIDE:Q92769
            DNASU:3066 Ensembl:ENST00000519065 GeneID:3066 KEGG:hsa:3066
            UCSC:uc003pwc.2 GeneCards:GC06M114254 HGNC:HGNC:4853 HPA:CAB005054
            HPA:HPA011727 MIM:605164 neXtProt:NX_Q92769 PharmGKB:PA29227
            InParanoid:Q92769 PhylomeDB:Q92769 SABIO-RK:Q92769 BindingDB:Q92769
            ChEMBL:CHEMBL1937 EvolutionaryTrace:Q92769 GenomeRNAi:3066
            NextBio:12129 ArrayExpress:Q92769 Bgee:Q92769 CleanEx:HS_HDAC2
            Genevestigator:Q92769 GermOnline:ENSG00000196591 GO:GO:0045347
            Uniprot:Q92769
        Length = 488

 Score = 1429 (508.1 bits), Expect = 2.8e-146, P = 2.8e-146
 Identities = 247/422 (58%), Positives = 328/422 (77%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
             K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct:     9 KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68

Query:    64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
             HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct:    69 HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128

Query:   124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
               D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct:   129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188

Query:   184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
             Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct:   189 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 247

Query:   244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
             KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  
Sbjct:   248 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 307

Query:   304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQV 363
             NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ N N+  Y+  IK ++
Sbjct:   308 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRL 367

Query:   364 LENLRSIQHAPSVQMQEVPPD-FYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDND 422
              ENLR + HAP VQMQ +P D  +    DED ++PD+R+     DK+I  D+EF + +++
Sbjct:   368 FENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDE 427

Query:   423 ND 424
              +
Sbjct:   428 GE 429


>UNIPROTKB|F1RZK8 [details] [associations]
            symbol:HDAC2 "Histone deacetylase" species:9823 "Sus
            scrofa" [GO:0090311 "regulation of protein deacetylation"
            evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
            receptor signaling pathway" evidence=IEA] [GO:0061198 "fungiform
            papilla formation" evidence=IEA] [GO:0061029 "eyelid development in
            camera-type eye" evidence=IEA] [GO:0060789 "hair follicle placode
            formation" evidence=IEA] [GO:0051091 "positive regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0048714 "positive regulation of oligodendrocyte
            differentiation" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045862 "positive regulation of proteolysis" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0043433 "negative regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043066 "negative
            regulation of apoptotic process" evidence=IEA] [GO:0042733
            "embryonic digit morphogenesis" evidence=IEA] [GO:0042475
            "odontogenesis of dentin-containing tooth" evidence=IEA]
            [GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0031490 "chromatin
            DNA binding" evidence=IEA] [GO:0021766 "hippocampus development"
            evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
            [GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580 "Sin3 complex"
            evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
            [GO:0010977 "negative regulation of neuron projection development"
            evidence=IEA] [GO:0010870 "positive regulation of receptor
            biosynthetic process" evidence=IEA] [GO:0009913 "epidermal cell
            differentiation" evidence=IEA] [GO:0008284 "positive regulation of
            cell proliferation" evidence=IEA] [GO:0008134 "transcription factor
            binding" evidence=IEA] [GO:0006344 "maintenance of chromatin
            silencing" evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0097372 "NAD-dependent
            histone deacetylase activity (H3-K18 specific)" evidence=IEA]
            [GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
            specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0032041
            "NAD-dependent histone deacetylase activity (H3-K14 specific)"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0021766 GO:GO:0043066
            GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0016358
            GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
            GO:GO:0048714 GO:GO:0042475 GO:GO:0035098 GO:GO:0043433
            GO:GO:0090090 GO:GO:0045862 GO:GO:0042733 GO:GO:0061029
            GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
            GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0060789
            GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 GO:GO:0016580 GO:GO:0010977 GO:GO:0061198
            GO:GO:0006344 GO:GO:0010870 OMA:WFGGPLL
            GeneTree:ENSGT00530000062889 EMBL:CU041333
            Ensembl:ENSSSCT00000004897 Uniprot:F1RZK8
        Length = 550

 Score = 1429 (508.1 bits), Expect = 2.8e-146, P = 2.8e-146
 Identities = 247/422 (58%), Positives = 328/422 (77%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
             K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct:    71 KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 130

Query:    64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
             HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct:   131 HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 190

Query:   124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
               D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct:   191 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 250

Query:   184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
             Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct:   251 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 309

Query:   244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
             KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  
Sbjct:   310 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 369

Query:   304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQV 363
             NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ N N+  Y+  IK ++
Sbjct:   370 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRL 429

Query:   364 LENLRSIQHAPSVQMQEVPPD-FYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDND 422
              ENLR + HAP VQMQ +P D  +    DED ++PD+R+     DK+I  D+EF + +++
Sbjct:   430 FENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDE 489

Query:   423 ND 424
              +
Sbjct:   490 GE 491


>MGI|MGI:1097691 [details] [associations]
            symbol:Hdac2 "histone deacetylase 2" species:10090 "Mus
            musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISO;IGI] [GO:0000785 "chromatin"
            evidence=ISO] [GO:0000790 "nuclear chromatin" evidence=IDA]
            [GO:0000792 "heterochromatin" evidence=IDA] [GO:0001047 "core
            promoter binding" evidence=ISO] [GO:0001103 "RNA polymerase II
            repressing transcription factor binding" evidence=ISO] [GO:0003682
            "chromatin binding" evidence=IDA] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=IDA]
            [GO:0004407 "histone deacetylase activity" evidence=ISO;IDA;TAS]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005657 "replication fork" evidence=IDA]
            [GO:0005667 "transcription factor complex" evidence=IPI]
            [GO:0005737 "cytoplasm" evidence=TAS] [GO:0006344 "maintenance of
            chromatin silencing" evidence=ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006476 "protein
            deacetylation" evidence=IDA] [GO:0008134 "transcription factor
            binding" evidence=ISO;TAS] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IGI;ISO] [GO:0009913 "epidermal cell
            differentiation" evidence=IGI] [GO:0010870 "positive regulation of
            receptor biosynthetic process" evidence=ISO] [GO:0010977 "negative
            regulation of neuron projection development" evidence=ISO;IDA]
            [GO:0016358 "dendrite development" evidence=IMP] [GO:0016568
            "chromatin modification" evidence=TAS] [GO:0016575 "histone
            deacetylation" evidence=ISO;IGI] [GO:0016580 "Sin3 complex"
            evidence=ISO] [GO:0016581 "NuRD complex" evidence=ISO] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0017053 "transcriptional
            repressor complex" evidence=IPI] [GO:0019899 "enzyme binding"
            evidence=ISO;IPI] [GO:0021766 "hippocampus development"
            evidence=IGI] [GO:0030182 "neuron differentiation" evidence=IGI]
            [GO:0031072 "heat shock protein binding" evidence=ISO] [GO:0031078
            "histone deacetylase activity (H3-K14 specific)" evidence=IEA]
            [GO:0031490 "chromatin DNA binding" evidence=IDA] [GO:0032041
            "NAD-dependent histone deacetylase activity (H3-K14 specific)"
            evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
            specific)" evidence=IEA] [GO:0033558 "protein deacetylase activity"
            evidence=ISO;IDA] [GO:0034739 "histone deacetylase activity (H4-K16
            specific)" evidence=IEA] [GO:0035098 "ESC/E(Z) complex"
            evidence=ISO] [GO:0042475 "odontogenesis of dentin-containing
            tooth" evidence=IGI] [GO:0042733 "embryonic digit morphogenesis"
            evidence=IGI] [GO:0043066 "negative regulation of apoptotic
            process" evidence=IGI] [GO:0043433 "negative regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
            evidence=ISO] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISO;IDA] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=ISO]
            [GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
            specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
            deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0048714
            "positive regulation of oligodendrocyte differentiation"
            evidence=IGI] [GO:0051091 "positive regulation of sequence-specific
            DNA binding transcription factor activity" evidence=IDA]
            [GO:0051896 "regulation of protein kinase B signaling cascade"
            evidence=IMP] [GO:0055013 "cardiac muscle cell development"
            evidence=IMP] [GO:0060044 "negative regulation of cardiac muscle
            cell proliferation" evidence=IMP] [GO:0060297 "regulation of
            sarcomere organization" evidence=IMP] [GO:0060789 "hair follicle
            placode formation" evidence=IGI] [GO:0061029 "eyelid development in
            camera-type eye" evidence=IGI] [GO:0061198 "fungiform papilla
            formation" evidence=IGI] [GO:0070932 "histone H3 deacetylation"
            evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
            [GO:0090090 "negative regulation of canonical Wnt receptor
            signaling pathway" evidence=IGI] [GO:0090311 "regulation of protein
            deacetylation" evidence=IGI] InterPro:IPR003084 PIRSF:PIRSF037913
            PRINTS:PR01271 Pfam:PF00850 MGI:MGI:1097691 INTERPRO:IPR000286
            GO:GO:0005737 GO:GO:0017053 GO:GO:0021766 GO:GO:0043066
            GO:GO:0051091 GO:GO:0008284 GO:GO:0043565 GO:GO:0045944
            GO:GO:0016358 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
            GO:GO:0000122 GO:GO:0000790 GO:GO:0048714 GO:GO:0042475
            GO:GO:0035098 GO:GO:0043433 GO:GO:0090090 GO:GO:0008134
            GO:GO:0045862 GO:GO:0042733 GO:GO:0061029 GO:GO:0031490
            EMBL:CH466540 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
            GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0000118
            GO:GO:0060789 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
            GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
            GO:GO:0016580 GO:GO:0010977 GO:GO:0061198 GO:GO:0006344
            GO:GO:0010870 GO:GO:0004407 GeneTree:ENSGT00530000062889
            HOVERGEN:HBG057112 OrthoDB:EOG4868CH CTD:3066 EMBL:U31758
            EMBL:BC138517 IPI:IPI00137668 RefSeq:NP_032255.2 UniGene:Mm.19806
            ProteinModelPortal:P70288 SMR:P70288 DIP:DIP-32854N IntAct:P70288
            MINT:MINT-146936 STRING:P70288 PhosphoSite:P70288 PaxDb:P70288
            PRIDE:P70288 Ensembl:ENSMUST00000019911 GeneID:15182 KEGG:mmu:15182
            InParanoid:B2RRP3 BindingDB:P70288 ChEMBL:CHEMBL4238 NextBio:287693
            Bgee:P70288 CleanEx:MM_HDAC2 Genevestigator:P70288
            GermOnline:ENSMUSG00000019777 GO:GO:0090311 Uniprot:P70288
        Length = 488

 Score = 1425 (506.7 bits), Expect = 7.3e-146, P = 7.3e-146
 Identities = 246/422 (58%), Positives = 327/422 (77%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
             K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct:     9 KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68

Query:    64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
             HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct:    69 HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128

Query:   124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
               D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct:   129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188

Query:   184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
             Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct:   189 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 247

Query:   244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
             KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV   K FNLPLL+ GGGGYT  
Sbjct:   248 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVAKTFNLPLLMLGGGGYTIR 307

Query:   304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQV 363
             NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ N N+  Y+  IK ++
Sbjct:   308 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRL 367

Query:   364 LENLRSIQHAPSVQMQEVPPD-FYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDND 422
              ENLR + HAP VQMQ +P D  +    DED ++PD+R+     DK+I  D+EF + +++
Sbjct:   368 FENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDE 427

Query:   423 ND 424
              +
Sbjct:   428 GE 429


>UNIPROTKB|F1PR63 [details] [associations]
            symbol:HDAC2 "Histone deacetylase" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
            of transcription, DNA-dependent" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
            GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 OMA:WFGGPLL
            GeneTree:ENSGT00530000062889 EMBL:AAEX03008633
            Ensembl:ENSCAFT00000006490 Uniprot:F1PR63
        Length = 488

 Score = 1404 (499.3 bits), Expect = 1.2e-143, P = 1.2e-143
 Identities = 245/422 (58%), Positives = 324/422 (76%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
             K K   F  GD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct:     9 KQKKCVFSSGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68

Query:    64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
             HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct:    69 HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128

Query:   124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
               D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct:   129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188

Query:   184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
             Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct:   189 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 247

Query:   244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
             KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  
Sbjct:   248 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 307

Query:   304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQV 363
             NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ N N+  Y+  IK ++
Sbjct:   308 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRL 367

Query:   364 LENLRSIQHAPSVQMQEVPPD-FYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDND 422
              ENLR + HAP VQMQ +P D  +    DED ++PD+R+     DK+I  D+EF + +++
Sbjct:   368 FENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDE 427

Query:   423 ND 424
              +
Sbjct:   428 GE 429


>FB|FBgn0015805 [details] [associations]
            symbol:Rpd3 "Rpd3" species:7227 "Drosophila melanogaster"
            [GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
            [GO:0007350 "blastoderm segmentation" evidence=IMP] [GO:0016575
            "histone deacetylation" evidence=IMP;NAS] [GO:0005634 "nucleus"
            evidence=IDA;NAS] [GO:0016580 "Sin3 complex" evidence=NAS]
            [GO:0000785 "chromatin" evidence=IDA] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IEP;NAS]
            [GO:0016581 "NuRD complex" evidence=NAS;IPI] [GO:0016458 "gene
            silencing" evidence=IMP] [GO:0006342 "chromatin silencing"
            evidence=IGI;IMP;IPI] [GO:0048477 "oogenesis" evidence=TAS]
            [GO:0003714 "transcription corepressor activity" evidence=NAS;IPI]
            [GO:0035098 "ESC/E(Z) complex" evidence=IDA;TAS] [GO:0008340
            "determination of adult lifespan" evidence=IMP;TAS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0031523 "Myb complex"
            evidence=IDA] [GO:0017053 "transcriptional repressor complex"
            evidence=IPI] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] [GO:0007517 "muscle
            organ development" evidence=IMP] [GO:0048813 "dendrite
            morphogenesis" evidence=IMP] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0006099
            "tricarboxylic acid cycle" evidence=IDA] [GO:0022904 "respiratory
            electron transport chain" evidence=IDA] [GO:2001229 "negative
            regulation of response to gamma radiation" evidence=IMP]
            [GO:0005705 "polytene chromosome interband" evidence=IDA]
            [GO:0050771 "negative regulation of axonogenesis" evidence=IMP]
            [GO:0070983 "dendrite guidance" evidence=IMP] [GO:0070822
            "Sin3-type complex" evidence=IDA] [GO:0005700 "polytene chromosome"
            evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0008340 GO:GO:0005737 GO:GO:0003714
            EMBL:AE014296 GO:GO:0048477 GO:GO:0006351 GO:GO:0006099
            GO:GO:0000122 GO:GO:0007517 GO:GO:0035098 GO:GO:0006342
            GO:GO:0008134 GO:GO:0050771 GO:GO:0022904 GO:GO:0070932
            GO:GO:0070933 GO:GO:0070983 GO:GO:0007350 GO:GO:0031523
            GO:GO:0016581 GO:GO:0005705 eggNOG:COG0123 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
            GO:GO:0016580 GO:GO:0004407 OMA:WFGGPLL
            GeneTree:ENSGT00530000062889 EMBL:Y09258 EMBL:AF086715
            EMBL:AF026949 EMBL:AY058487 RefSeq:NP_647918.2 UniGene:Dm.2976
            ProteinModelPortal:Q94517 SMR:Q94517 DIP:DIP-29512N IntAct:Q94517
            MINT:MINT-1746418 STRING:Q94517 PaxDb:Q94517
            EnsemblMetazoa:FBtr0073317 GeneID:38565 KEGG:dme:Dmel_CG7471
            CTD:38565 FlyBase:FBgn0015805 InParanoid:Q94517 OrthoDB:EOG476HFG
            PhylomeDB:Q94517 GenomeRNAi:38565 NextBio:809299 Bgee:Q94517
            GermOnline:CG7471 Uniprot:Q94517
        Length = 521

 Score = 1400 (497.9 bits), Expect = 3.3e-143, P = 3.3e-143
 Identities = 243/423 (57%), Positives = 326/423 (77%)

Query:     3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
             SK ++ Y+YD D+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct:     5 SKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 64

Query:    63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
             FHS +YV FL  I PD    + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN 
Sbjct:    65 FHSDEYVRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 124

Query:   123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             Q  +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct:   125 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 184

Query:   183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
             FY TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N+PL+DG+DD ++  +F  II
Sbjct:   185 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPII 243

Query:   243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT 
Sbjct:   244 SKVMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTI 303

Query:   303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQ 362
              NV+RCWT ET + L  E+ NE+P N+Y +YF P+  L I   ++ N N+  YL  IK +
Sbjct:   304 RNVSRCWTYETSVALAVEIANELPYNDYFEYFGPDFKLHISPSNMTNQNTSEYLEKIKNR 363

Query:   363 VLENLRSIQHAPSVQMQEVPPDFYIPEFD-EDEQNPDERMDQHTQDKQIQRDDEFYEGDN 421
             + ENLR + HAP VQ+Q +P D    E D ED+ + D+R+ Q  +DK+I  ++E+ + ++
Sbjct:   364 LFENLRMLPHAPGVQIQAIPEDAINDESDDEDKVDKDDRLPQSDKDKRIVPENEYSDSED 423

Query:   422 DND 424
             + +
Sbjct:   424 EGE 426


>UNIPROTKB|P56520 [details] [associations]
            symbol:HDAC3 "Histone deacetylase 3" species:9031 "Gallus
            gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
            (H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
            activity (H3-K18 specific)" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0000118 "histone deacetylase complex" evidence=TAS] [GO:0016568
            "chromatin modification" evidence=TAS] [GO:0008134 "transcription
            factor binding" evidence=TAS] [GO:0005634 "nucleus" evidence=TAS]
            [GO:0005737 "cytoplasm" evidence=TAS] [GO:0004407 "histone
            deacetylase activity" evidence=TAS] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005737 GO:GO:0006355 GO:GO:0006351 GO:GO:0008134
            GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
            GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
            HOVERGEN:HBG057112 EMBL:AF039753 IPI:IPI00602732 RefSeq:NP_990078.1
            UniGene:Gga.2110 ProteinModelPortal:P56520 STRING:P56520
            PRIDE:P56520 GeneID:395506 KEGG:gga:395506 CTD:8841
            InParanoid:P56520 KO:K11404 OrthoDB:EOG4MGS79 BindingDB:P56520
            ChEMBL:CHEMBL4584 NextBio:20815585 Uniprot:P56520
        Length = 428

 Score = 1387 (493.3 bits), Expect = 7.8e-142, P = 7.8e-142
 Identities = 244/420 (58%), Positives = 319/420 (75%)

Query:     7 ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
             ++YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS 
Sbjct:     5 VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64

Query:    67 DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
             DY++FL R++P+    F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CD
Sbjct:    65 DYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124

Query:   127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
             IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct:   125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184

Query:   187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
             DRVMTVSFHK+G+ FFPGTGD+ E+G   G++YA+NVPL+DGIDD S+  LF+ +I++VV
Sbjct:   185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYALNVPLRDGIDDQSYKHLFQPVINQVV 244

Query:   247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
             + Y P  IVLQCGADSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT  NVA
Sbjct:   245 DYYQPTCIVLQCGADSLGRDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304

Query:   307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLE 365
             RCWT ET +L+D  +  E+P +EY +YFAP+ +L    +  IEN NS+ YL  I+  + E
Sbjct:   305 RCWTYETSLLVDEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364

Query:   366 NLRSIQHAPSVQMQEVPPDFYIPEFDE-DEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 424
             NL+ + HAPSVQ+ +VP D     +D  DE +P+ER  +    +  +  +EFY+GD+DND
Sbjct:   365 NLKMLNHAPSVQIHDVPSDLL--SYDRTDEPDPEERGSEENYSRP-EAANEFYDGDHDND 421


>UNIPROTKB|P56519 [details] [associations]
            symbol:HDAC2 "Histone deacetylase 2" species:9031 "Gallus
            gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] [GO:0000118 "histone deacetylase complex"
            evidence=TAS] [GO:0004407 "histone deacetylase activity"
            evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
            [GO:0005634 "nucleus" evidence=TAS] [GO:0005737 "cytoplasm"
            evidence=TAS] [GO:0035098 "ESC/E(Z) complex" evidence=ISS]
            [GO:0008134 "transcription factor binding" evidence=TAS]
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355 GO:GO:0006351
            GO:GO:0035098 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
            GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
            GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
            GO:GO:0004407 HOVERGEN:HBG057112 OrthoDB:EOG4868CH EMBL:AF039752
            IPI:IPI00596260 RefSeq:NP_990162.1 UniGene:Gga.2951
            ProteinModelPortal:P56519 IntAct:P56519 STRING:P56519 PRIDE:P56519
            GeneID:395635 KEGG:gga:395635 CTD:3066 InParanoid:P56519
            BindingDB:P56519 ChEMBL:CHEMBL4583 NextBio:20815708 Uniprot:P56519
        Length = 488

 Score = 1385 (492.6 bits), Expect = 1.3e-141, P = 1.3e-141
 Identities = 243/422 (57%), Positives = 322/422 (76%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
             K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct:     9 KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68

Query:    64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
             HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct:    69 HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128

Query:   124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
               D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct:   129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188

Query:   184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
             Y TDRVMTVS     + F PGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct:   189 YTTDRVMTVSEVSMVNNF-PGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 247

Query:   244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
             KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  
Sbjct:   248 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 307

Query:   304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQV 363
             NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ N N+  Y+  IK ++
Sbjct:   308 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRL 367

Query:   364 LENLRSIQHAPSVQMQEVPPD-FYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDND 422
              ENLR + HAP VQMQ +P D  +    DED ++PD+R+     DK+I  D+EF + +++
Sbjct:   368 FENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDE 427

Query:   423 ND 424
              +
Sbjct:   428 GE 429


>UNIPROTKB|F1NH59 [details] [associations]
            symbol:HDAC3 "Histone deacetylase" species:9031 "Gallus
            gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
            specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
            activity (H3-K18 specific)" evidence=IEA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0003714 "transcription corepressor activity"
            evidence=IEA] [GO:0005876 "spindle microtubule" evidence=IEA]
            [GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
            [GO:0017053 "transcriptional repressor complex" evidence=IEA]
            [GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0032922
            "circadian regulation of gene expression" evidence=IEA] [GO:0040014
            "regulation of multicellular organism growth" evidence=IEA]
            [GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0046329
            "negative regulation of JNK cascade" evidence=IEA] [GO:0051225
            "spindle assembly" evidence=IEA] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0007346 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
            GO:GO:0040014 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
            GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
            GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
            IPI:IPI00602732 OMA:NFHYGPG EMBL:AADN02036019 EMBL:AADN02036020
            EMBL:AADN02036021 EMBL:AADN02036022 EMBL:AADN02036023
            EMBL:AADN02040559 EMBL:AADN02036016 EMBL:AADN02036017
            EMBL:AADN02036018 Ensembl:ENSGALT00000004150
            Ensembl:ENSGALT00000034685 Uniprot:F1NH59
        Length = 428

 Score = 1382 (491.5 bits), Expect = 2.6e-141, P = 2.6e-141
 Identities = 243/420 (57%), Positives = 318/420 (75%)

Query:     7 ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
             ++YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS 
Sbjct:     5 VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64

Query:    67 DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
             DY++FL R++P+    F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CD
Sbjct:    65 DYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124

Query:   127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
             IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct:   125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184

Query:   187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
             DRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +I++VV
Sbjct:   185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVV 244

Query:   247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
             + Y P  IVLQCGADSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT  NVA
Sbjct:   245 DYYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304

Query:   307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLE 365
             RCWT ET +L+D  +  E+P +EY +YFAP+ +L    +  IEN NS+ YL  I+  + E
Sbjct:   305 RCWTYETSLLVDEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364

Query:   366 NLRSIQHAPSVQMQEVPPDFYIPEFDE-DEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 424
             NL+ + HAPSVQ+ +VP D     +D  DE +P+ER  +    +  +  +EFY+GD+DND
Sbjct:   365 NLKMLNHAPSVQIHDVPSDLL--SYDRTDEPDPEERGSEENYSRP-EAANEFYDGDHDND 421


>MGI|MGI:1343091 [details] [associations]
            symbol:Hdac3 "histone deacetylase 3" species:10090 "Mus
            musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
            evidence=ISO] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003682
            "chromatin binding" evidence=IDA] [GO:0003714 "transcription
            corepressor activity" evidence=ISO] [GO:0004407 "histone
            deacetylase activity" evidence=ISO;TAS] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;TAS]
            [GO:0005737 "cytoplasm" evidence=ISO;TAS] [GO:0005876 "spindle
            microtubule" evidence=ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006476 "protein
            deacetylation" evidence=ISO] [GO:0007346 "regulation of mitotic
            cell cycle" evidence=IDA] [GO:0008134 "transcription factor
            binding" evidence=TAS] [GO:0016568 "chromatin modification"
            evidence=TAS] [GO:0016575 "histone deacetylation" evidence=IGI;IMP]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017053
            "transcriptional repressor complex" evidence=ISO] [GO:0019899
            "enzyme binding" evidence=ISO] [GO:0031078 "histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0031490 "chromatin
            DNA binding" evidence=IDA] [GO:0032041 "NAD-dependent histone
            deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
            "histone deacetylase activity (H3-K9 specific)" evidence=IEA]
            [GO:0032922 "circadian regulation of gene expression" evidence=IGI]
            [GO:0033558 "protein deacetylase activity" evidence=ISO]
            [GO:0034739 "histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0040014 "regulation of multicellular organism
            growth" evidence=IGI] [GO:0042826 "histone deacetylase binding"
            evidence=ISO] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISO] [GO:0046329 "negative regulation of
            JNK cascade" evidence=ISO] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0051225 "spindle assembly" evidence=ISO]
            [GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
            "histone H4 deacetylation" evidence=IEA] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 EMBL:AF074881 Pfam:PF00850
            MGI:MGI:1343091 INTERPRO:IPR000286 GO:GO:0007346 GO:GO:0005737
            GO:GO:0017053 GO:GO:0003714 GO:GO:0051225 GO:GO:0042493
            GO:GO:0040014 GO:GO:0000785 GO:GO:0006351 GO:GO:0000122
            Reactome:REACT_127416 GO:GO:0032922 GO:GO:0046329 GO:GO:0008134
            GO:GO:0031490 GO:GO:0005876 GO:GO:0070932 GO:GO:0070933
            Reactome:REACT_27166 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            HOVERGEN:HBG057112 OrthoDB:EOG4MGS79 ChiTaRS:HDAC3 EMBL:AF074882
            EMBL:AF079310 EMBL:AF079309 IPI:IPI00135456 IPI:IPI00228758
            PIR:JC7102 UniGene:Mm.20521 ProteinModelPortal:O88895 SMR:O88895
            DIP:DIP-32547N IntAct:O88895 MINT:MINT-4302141 STRING:O88895
            PhosphoSite:O88895 PaxDb:O88895 PRIDE:O88895 HOGENOM:HOG000185805
            InParanoid:O88895 BindingDB:O88895 ChEMBL:CHEMBL5142 Bgee:O88895
            CleanEx:MM_HDAC3 Genevestigator:O88895
            GermOnline:ENSMUSG00000024454 Uniprot:O88895
        Length = 424

 Score = 1370 (487.3 bits), Expect = 4.9e-140, P = 4.9e-140
 Identities = 242/420 (57%), Positives = 316/420 (75%)

Query:     7 ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
             ++YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS 
Sbjct:     5 VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64

Query:    67 DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
             DY++FL R++P     F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CD
Sbjct:    65 DYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124

Query:   127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
             IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct:   125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184

Query:   187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
             DRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +IS+VV
Sbjct:   185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVV 244

Query:   247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
             + Y P  IVLQCGADSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT  NVA
Sbjct:   245 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304

Query:   307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLE 365
             RCWT ET +L++  +  E+P +EY +YFAP+ +L    +  IEN NS+ YL  I+  + E
Sbjct:   305 RCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364

Query:   366 NLRSIQHAPSVQMQEVPPDFYIPEFDE-DEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 424
             NL+ + HAPSVQ+ +VP D     +D  DE + +ER  +    +  +  +EFY+GD+DND
Sbjct:   365 NLKMLNHAPSVQIHDVPADLLT--YDRTDEADAEERGPEENYSRP-EAPNEFYDGDHDND 421


>RGD|619977 [details] [associations]
            symbol:Hdac3 "histone deacetylase 3" species:10116 "Rattus
            norvegicus" [GO:0000122 "negative regulation of transcription from
            RNA polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
            evidence=IDA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003682
            "chromatin binding" evidence=ISO] [GO:0003714 "transcription
            corepressor activity" evidence=ISO] [GO:0004407 "histone
            deacetylase activity" evidence=ISO;IDA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA;ISO;IDA]
            [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0005876 "spindle microtubule" evidence=ISO]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006476 "protein deacetylation" evidence=ISO]
            [GO:0007346 "regulation of mitotic cell cycle" evidence=ISO]
            [GO:0016575 "histone deacetylation" evidence=ISO] [GO:0017053
            "transcriptional repressor complex" evidence=ISO] [GO:0019899
            "enzyme binding" evidence=ISO] [GO:0031490 "chromatin DNA binding"
            evidence=ISO] [GO:0032041 "NAD-dependent histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0032922 "circadian
            regulation of gene expression" evidence=ISO] [GO:0033558 "protein
            deacetylase activity" evidence=ISO] [GO:0040014 "regulation of
            multicellular organism growth" evidence=ISO] [GO:0042493 "response
            to drug" evidence=IEP] [GO:0042826 "histone deacetylase binding"
            evidence=ISO] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISO] [GO:0046329 "negative regulation of
            JNK cascade" evidence=ISO] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0051225 "spindle assembly" evidence=ISO]
            [GO:0070932 "histone H3 deacetylation" evidence=IEP] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] [GO:0010832 "negative regulation of myotube
            differentiation" evidence=ISO] InterPro:IPR003084 PIRSF:PIRSF037913
            PRINTS:PR01271 Pfam:PF00850 RGD:619977 INTERPRO:IPR000286
            GO:GO:0007346 GO:GO:0005737 GO:GO:0017053 GO:GO:0003714
            Reactome:REACT_111984 GO:GO:0005654 GO:GO:0051225 GO:GO:0042493
            GO:GO:0040014 GO:GO:0000785 GO:GO:0006351 GO:GO:0000122
            GO:GO:0032922 GO:GO:0046329 GO:GO:0031490 GO:GO:0005876
            GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            HOGENOM:HOG000225180 HSSP:Q9BY41 HOVERGEN:HBG057112 CTD:8841
            KO:K11404 OrthoDB:EOG4MGS79 EMBL:AF321131 EMBL:BC061988
            IPI:IPI00421548 RefSeq:NP_445900.1 UniGene:Rn.17284
            ProteinModelPortal:Q6P6W3 SMR:Q6P6W3 STRING:Q6P6W3
            PhosphoSite:Q6P6W3 GeneID:84578 KEGG:rno:84578 UCSC:RGD:619977
            InParanoid:Q6P6W3 BindingDB:Q6P6W3 ChEMBL:CHEMBL2628 NextBio:617139
            ArrayExpress:Q6P6W3 Genevestigator:Q6P6W3 Uniprot:Q6P6W3
        Length = 428

 Score = 1370 (487.3 bits), Expect = 4.9e-140, P = 4.9e-140
 Identities = 242/420 (57%), Positives = 316/420 (75%)

Query:     7 ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
             ++YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS 
Sbjct:     5 VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64

Query:    67 DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
             DY++FL R++P     F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CD
Sbjct:    65 DYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124

Query:   127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
             IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct:   125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184

Query:   187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
             DRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +IS+VV
Sbjct:   185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVV 244

Query:   247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
             + Y P  IVLQCGADSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT  NVA
Sbjct:   245 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304

Query:   307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLE 365
             RCWT ET +L++  +  E+P +EY +YFAP+ +L    +  IEN NS+ YL  I+  + E
Sbjct:   305 RCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364

Query:   366 NLRSIQHAPSVQMQEVPPDFYIPEFDE-DEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 424
             NL+ + HAPSVQ+ +VP D     +D  DE + +ER  +    +  +  +EFY+GD+DND
Sbjct:   365 NLKMLNHAPSVQIHDVPADLLT--YDRTDEADAEERGPEENYSRP-EAPNEFYDGDHDND 421


>UNIPROTKB|Q6P6W3 [details] [associations]
            symbol:Hdac3 "Histone deacetylase 3" species:10116 "Rattus
            norvegicus" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0032041 "NAD-dependent histone
            deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
            Pfam:PF00850 RGD:619977 INTERPRO:IPR000286 GO:GO:0007346
            GO:GO:0005737 GO:GO:0017053 GO:GO:0003714 Reactome:REACT_111984
            GO:GO:0005654 GO:GO:0051225 GO:GO:0042493 GO:GO:0040014
            GO:GO:0000785 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
            GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
            GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
            GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 HSSP:Q9BY41
            HOVERGEN:HBG057112 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79
            EMBL:AF321131 EMBL:BC061988 IPI:IPI00421548 RefSeq:NP_445900.1
            UniGene:Rn.17284 ProteinModelPortal:Q6P6W3 SMR:Q6P6W3 STRING:Q6P6W3
            PhosphoSite:Q6P6W3 GeneID:84578 KEGG:rno:84578 UCSC:RGD:619977
            InParanoid:Q6P6W3 BindingDB:Q6P6W3 ChEMBL:CHEMBL2628 NextBio:617139
            ArrayExpress:Q6P6W3 Genevestigator:Q6P6W3 Uniprot:Q6P6W3
        Length = 428

 Score = 1370 (487.3 bits), Expect = 4.9e-140, P = 4.9e-140
 Identities = 242/420 (57%), Positives = 316/420 (75%)

Query:     7 ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
             ++YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS 
Sbjct:     5 VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64

Query:    67 DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
             DY++FL R++P     F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CD
Sbjct:    65 DYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124

Query:   127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
             IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct:   125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184

Query:   187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
             DRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +IS+VV
Sbjct:   185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVV 244

Query:   247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
             + Y P  IVLQCGADSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT  NVA
Sbjct:   245 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304

Query:   307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLE 365
             RCWT ET +L++  +  E+P +EY +YFAP+ +L    +  IEN NS+ YL  I+  + E
Sbjct:   305 RCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364

Query:   366 NLRSIQHAPSVQMQEVPPDFYIPEFDE-DEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 424
             NL+ + HAPSVQ+ +VP D     +D  DE + +ER  +    +  +  +EFY+GD+DND
Sbjct:   365 NLKMLNHAPSVQIHDVPADLLT--YDRTDEADAEERGPEENYSRP-EAPNEFYDGDHDND 421


>DICTYBASE|DDB_G0270338 [details] [associations]
            symbol:hdaB "type-1 histone deacetylase"
            species:44689 "Dictyostelium discoideum" [GO:0016575 "histone
            deacetylation" evidence=IEA;IMP] [GO:0005634 "nucleus"
            evidence=IEA;IDA] [GO:0004407 "histone deacetylase activity"
            evidence=IEA;IMP] [GO:0097372 "NAD-dependent histone deacetylase
            activity (H3-K18 specific)" evidence=IEA] [GO:0070933 "histone H4
            deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
            specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
            (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
            deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
            "histone deacetylase activity (H3-K14 specific)" evidence=IEA]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
            modification" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
            PRINTS:PR01271 dictyBase:DDB_G0270338 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 EMBL:AAFI02000005
            GenomeReviews:CM000150_GR GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
            GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 HSSP:Q9BY41
            GO:GO:0004407 RefSeq:XP_646719.1 ProteinModelPortal:Q55BW2
            STRING:Q55BW2 EnsemblProtists:DDB0237652 GeneID:8617692
            KEGG:ddi:DDB_G0270338 OMA:RDDEYYE Uniprot:Q55BW2
        Length = 422

 Score = 1368 (486.6 bits), Expect = 8.0e-140, P = 8.0e-140
 Identities = 245/410 (59%), Positives = 325/410 (79%)

Query:     3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
             SK ++ YF+D DVG+ ++GP HPMKPHRLC+T++LVL+Y LHKKM +Y+   A   ++ +
Sbjct:    11 SKTRVCYFFDQDVGNYFYGPYHPMKPHRLCLTNNLVLNYGLHKKMHLYKARPADAEDMLK 70

Query:    63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
             FHS DYV+FL R+TP+  + ++ ++ ++++GEDCPVF  L+++C IY+GG+I+ A +LN+
Sbjct:    71 FHSEDYVDFLERVTPENINEWK-DVKRFHIGEDCPVFPGLYDYCSIYSGGSIEGALKLNH 129

Query:   123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             ++ DIAINW+GGLHHA+K EASGFCY+ND+VL ILELLK+HARVLYIDIDVHHGDGV+EA
Sbjct:   130 RMYDIAINWSGGLHHARKDEASGFCYVNDIVLAILELLKFHARVLYIDIDVHHGDGVQEA 189

Query:   183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
             FY TDRVMTVSFHKFG  FFPGTGD+ EIG + GK Y++NVPL DGIDD ++  +FK +I
Sbjct:   190 FYLTDRVMTVSFHKFGGDFFPGTGDIDEIGAKTGKLYSVNVPLADGIDDKNYLNIFKPVI 249

Query:   243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
               V++ Y P  IVLQCGADSL  DRLGCFNL+I GHAECVRFVK FN+P LV GGGGYT 
Sbjct:   250 QGVMDYYRPSVIVLQCGADSLRFDRLGCFNLTIKGHAECVRFVKSFNIPTLVLGGGGYTV 309

Query:   303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPN--G---HIENLNSKSYLS 357
              NVARCWT ET + +DTE+ NE+P N+YI++++P+  L IP+  G     EN N+KSYL 
Sbjct:   310 RNVARCWTYETSVCVDTEVNNELPYNDYIQFYSPDFQL-IPDYTGLPFKYENANTKSYLE 368

Query:   358 TIKMQVLENLRSIQHAPSVQMQEVPPDFYIPEFDEDE---QNPDERMDQH 404
             ++++++LENLR +Q APSVQ+Q+VPPD    +FD DE   +N D+R  +H
Sbjct:   369 SLRIKILENLRILQWAPSVQIQDVPPDIMPIDFDRDEDSKENMDKRKKKH 418


>UNIPROTKB|E2R792 [details] [associations]
            symbol:HDAC3 "Histone deacetylase" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
            of transcription, DNA-dependent" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
            GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
            CTD:8841 KO:K11404 OMA:NFHYGPG EMBL:AAEX03001397 RefSeq:XP_535219.2
            ProteinModelPortal:E2R792 Ensembl:ENSCAFT00000035162 GeneID:478040
            KEGG:cfa:478040 Uniprot:E2R792
        Length = 428

 Score = 1367 (486.3 bits), Expect = 1.0e-139, P = 1.0e-139
 Identities = 241/420 (57%), Positives = 316/420 (75%)

Query:     7 ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
             ++YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS 
Sbjct:     5 VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64

Query:    67 DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
             DY++FL R++P     F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CD
Sbjct:    65 DYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124

Query:   127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
             IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct:   125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184

Query:   187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
             DRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +I++VV
Sbjct:   185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVV 244

Query:   247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
             + Y P  IVLQCGADSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT  NVA
Sbjct:   245 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304

Query:   307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLE 365
             RCWT ET +L++  +  E+P +EY +YFAP+ +L    +  IEN NS+ YL  I+  + E
Sbjct:   305 RCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364

Query:   366 NLRSIQHAPSVQMQEVPPDFYIPEFDE-DEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 424
             NL+ + HAPSVQ+ +VP D     +D  DE + +ER  +    +  +  +EFY+GD+DND
Sbjct:   365 NLKMLNHAPSVQIHDVPADLLT--YDRTDEADAEERGPEENYSRP-EAPNEFYDGDHDND 421


>UNIPROTKB|O15379 [details] [associations]
            symbol:HDAC3 "Histone deacetylase 3" species:9606 "Homo
            sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
            specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
            activity (H3-K18 specific)" evidence=IEA] [GO:0007346 "regulation
            of mitotic cell cycle" evidence=IEA] [GO:0031490 "chromatin DNA
            binding" evidence=IEA] [GO:0032922 "circadian regulation of gene
            expression" evidence=IEA] [GO:0040014 "regulation of multicellular
            organism growth" evidence=IEA] [GO:0004407 "histone deacetylase
            activity" evidence=IMP;TAS] [GO:0016568 "chromatin modification"
            evidence=TAS] [GO:0008134 "transcription factor binding"
            evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0005515
            "protein binding" evidence=IPI] [GO:0046329 "negative regulation of
            JNK cascade" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA;TAS]
            [GO:0017053 "transcriptional repressor complex" evidence=IDA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IDA;IMP] [GO:0000118 "histone
            deacetylase complex" evidence=TAS] [GO:0033558 "protein deacetylase
            activity" evidence=IDA] [GO:0005876 "spindle microtubule"
            evidence=IDA] [GO:0051225 "spindle assembly" evidence=IMP]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IMP] [GO:0003714 "transcription corepressor activity"
            evidence=IMP] [GO:0006476 "protein deacetylation" evidence=IDA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=TAS] [GO:0019899 "enzyme binding" evidence=IPI]
            [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0007219 "Notch
            signaling pathway" evidence=TAS] [GO:0044255 "cellular lipid
            metabolic process" evidence=TAS] [GO:0044281 "small molecule
            metabolic process" evidence=TAS] [GO:0045786 "negative regulation
            of cell cycle" evidence=TAS] [GO:0048011 "neurotrophin TRK receptor
            signaling pathway" evidence=TAS] [GO:0042826 "histone deacetylase
            binding" evidence=IPI] [GO:0010832 "negative regulation of myotube
            differentiation" evidence=IMP] Reactome:REACT_111217
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0007346 GO:GO:0005737
            Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111045
            Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0048011
            GO:GO:0043066 GO:GO:0051225 EMBL:CH471062 GO:GO:0044281
            GO:GO:0042493 GO:GO:0040014 GO:GO:0007219 GO:GO:0000785
            GO:GO:0044255 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
            GO:GO:0046329 GO:GO:0008134
            Pathway_Interaction_DB:retinoic_acid_pathway
            Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0031490
            GO:GO:0005876 GO:GO:0045786 GO:GO:0070932 GO:GO:0070933
            Reactome:REACT_24941 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            HOGENOM:HOG000225180 GO:GO:0004407 HOVERGEN:HBG057112
            DrugBank:DB02546 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79 EMBL:U66914
            EMBL:U75697 EMBL:U75696 EMBL:AF005482 EMBL:AF039703 EMBL:AF059650
            EMBL:BC000614 EMBL:AF053138 EMBL:AF053137 EMBL:AF053139
            IPI:IPI00006187 IPI:IPI00217965 PIR:JC5834 RefSeq:NP_003874.2
            UniGene:Hs.519632 PDB:4A69 PDBsum:4A69 ProteinModelPortal:O15379
            SMR:O15379 DIP:DIP-24253N IntAct:O15379 MINT:MINT-196172
            STRING:O15379 PhosphoSite:O15379 PaxDb:O15379 PRIDE:O15379
            DNASU:8841 Ensembl:ENST00000305264 GeneID:8841 KEGG:hsa:8841
            UCSC:uc003lle.1 GeneCards:GC05M140980 HGNC:HGNC:4854 HPA:CAB005583
            MIM:605166 neXtProt:NX_O15379 PharmGKB:PA29228 InParanoid:O15379
            OMA:NFHYGPG PhylomeDB:O15379 SABIO-RK:O15379 BindingDB:O15379
            ChEMBL:CHEMBL1829 ChiTaRS:HDAC3 GenomeRNAi:8841 NextBio:33190
            PMAP-CutDB:O15379 ArrayExpress:O15379 Bgee:O15379 CleanEx:HS_HDAC3
            Genevestigator:O15379 GermOnline:ENSG00000171720 Uniprot:O15379
        Length = 428

 Score = 1367 (486.3 bits), Expect = 1.0e-139, P = 1.0e-139
 Identities = 241/420 (57%), Positives = 316/420 (75%)

Query:     7 ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
             ++YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS 
Sbjct:     5 VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64

Query:    67 DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
             DY++FL R++P     F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CD
Sbjct:    65 DYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124

Query:   127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
             IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct:   125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184

Query:   187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
             DRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +I++VV
Sbjct:   185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVV 244

Query:   247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
             + Y P  IVLQCGADSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT  NVA
Sbjct:   245 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304

Query:   307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLE 365
             RCWT ET +L++  +  E+P +EY +YFAP+ +L    +  IEN NS+ YL  I+  + E
Sbjct:   305 RCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364

Query:   366 NLRSIQHAPSVQMQEVPPDFYIPEFDE-DEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 424
             NL+ + HAPSVQ+ +VP D     +D  DE + +ER  +    +  +  +EFY+GD+DND
Sbjct:   365 NLKMLNHAPSVQIHDVPADLLT--YDRTDEADAEERGPEENYSRP-EAPNEFYDGDHDND 421


>UNIPROTKB|F2Z4Z6 [details] [associations]
            symbol:HDAC3 "Histone deacetylase" species:9823 "Sus
            scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0046329
            "negative regulation of JNK cascade" evidence=IEA] [GO:0042826
            "histone deacetylase binding" evidence=IEA] [GO:0040014 "regulation
            of multicellular organism growth" evidence=IEA] [GO:0032922
            "circadian regulation of gene expression" evidence=IEA] [GO:0031490
            "chromatin DNA binding" evidence=IEA] [GO:0017053 "transcriptional
            repressor complex" evidence=IEA] [GO:0007346 "regulation of mitotic
            cell cycle" evidence=IEA] [GO:0005876 "spindle microtubule"
            evidence=IEA] [GO:0003714 "transcription corepressor activity"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0007346 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
            GO:GO:0040014 GO:GO:0006351 GO:GO:0000122 GO:GO:0032922
            GO:GO:0046329 GO:GO:0031490 GO:GO:0005876 GO:GO:0070932
            GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
            CTD:8841 KO:K11404 OMA:NFHYGPG EMBL:CU463118 RefSeq:NP_001230756.1
            UniGene:Ssc.11572 ProteinModelPortal:F2Z4Z6 SMR:F2Z4Z6 PRIDE:F2Z4Z6
            Ensembl:ENSSSCT00000015725 GeneID:100511372 KEGG:ssc:100511372
            Uniprot:F2Z4Z6
        Length = 428

 Score = 1367 (486.3 bits), Expect = 1.0e-139, P = 1.0e-139
 Identities = 241/420 (57%), Positives = 316/420 (75%)

Query:     7 ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
             ++YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS 
Sbjct:     5 VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64

Query:    67 DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
             DY++FL R++P     F + L  +N+G+DCPVF  LFEFC  Y G ++  A +LNN++CD
Sbjct:    65 DYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124

Query:   127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
             IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct:   125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184

Query:   187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
             DRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +I++VV
Sbjct:   185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVV 244

Query:   247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
             + Y P  IVLQCGADSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT  NVA
Sbjct:   245 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304

Query:   307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLE 365
             RCWT ET +L++  +  E+P +EY +YFAP+ +L    +  IEN NS+ YL  I+  + E
Sbjct:   305 RCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364

Query:   366 NLRSIQHAPSVQMQEVPPDFYIPEFDE-DEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 424
             NL+ + HAPSVQ+ +VP D     +D  DE + +ER  +    +  +  +EFY+GD+DND
Sbjct:   365 NLKMLNHAPSVQIHDVPADLLT--YDRTDEADAEERGPEENYSRP-EAPNEFYDGDHDND 421


>TAIR|locus:2120948 [details] [associations]
            symbol:HD1 "AT4G38130" species:3702 "Arabidopsis
            thaliana" [GO:0004407 "histone deacetylase activity"
            evidence=ISS;IDA;IMP] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
            [GO:0016575 "histone deacetylation" evidence=ISS] [GO:2000026
            "regulation of multicellular organismal development" evidence=IMP]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0009861 "jasmonic
            acid and ethylene-dependent systemic resistance" evidence=IMP]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IMP;IDA] [GO:0016573 "histone acetylation" evidence=IDA]
            [GO:0009294 "DNA mediated transformation" evidence=IMP] [GO:0009405
            "pathogenesis" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
            PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
            GO:GO:0045892 GO:GO:0009405 EMBL:CP002687 GenomeReviews:CT486007_GR
            GO:GO:0016573 GO:GO:0006351 EMBL:AL035538 GO:GO:0009294
            EMBL:AL161593 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
            GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0009861
            GO:GO:0004407 EMBL:AF014824 EMBL:AF195547 EMBL:AY093153
            EMBL:BT008873 EMBL:AK226389 IPI:IPI00522349 PIR:T05640
            RefSeq:NP_195526.1 UniGene:At.25069 ProteinModelPortal:O22446
            SMR:O22446 DIP:DIP-33483N IntAct:O22446 STRING:O22446 PaxDb:O22446
            PRIDE:O22446 EnsemblPlants:AT4G38130.1 GeneID:829969
            KEGG:ath:AT4G38130 TAIR:At4g38130 InParanoid:O22446 OMA:MEIFRPG
            PhylomeDB:O22446 ProtClustDB:CLSN2685384 Genevestigator:O22446
            GermOnline:AT4G38130 GO:GO:2000026 Uniprot:O22446
        Length = 501

 Score = 1362 (484.5 bits), Expect = 3.5e-139, P = 3.5e-139
 Identities = 244/412 (59%), Positives = 314/412 (76%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
             K K+ YFYD +VG+ Y+G  HPMKPHR+ MTH L+  Y L + M++ +P  A   +L +F
Sbjct:    16 KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLKPFPARDRDLCRF 75

Query:    64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
             H+ DYV FL  ITP+TQ    ++L ++N+GEDCPVF+ L+ FCQ YAGG++  + +LN+ 
Sbjct:    76 HADDYVSFLRSITPETQQDQIRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGSVKLNHG 135

Query:   124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             LCDIAINWAGGLHHAKKCEASGFCY+ND+VL ILELLK H RVLY+DID+HHGDGVEEAF
Sbjct:   136 LCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAF 195

Query:   184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
             Y TDRVMTVSFHKFGD +FPGTG +++IG   GK+Y++NVPL DGIDD S+  LFK I+ 
Sbjct:   196 YATDRVMTVSFHKFGD-YFPGTGHIQDIGYGSGKYYSLNVPLDDGIDDESYHLLFKPIMG 254

Query:   244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
             KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECV+F++ FN+PLL+ GGGGYT  
Sbjct:   255 KVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIR 314

Query:   304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQV 363
             NVARCW  ETG+ L  E+ +++PE+EY +YF P+ +L +   ++EN NS+  L  I+  +
Sbjct:   315 NVARCWCYETGVALGVEVEDKMPEHEYYEYFGPDYTLHVAPSNMENKNSRQMLEEIRNDL 374

Query:   364 LENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERMDQHTQDKQIQRDDE 415
             L NL  +QHAPSV  QE PPD   PE DED+++ D+R D    D  +  DD+
Sbjct:   375 LHNLSKLQHAPSVPFQERPPDTETPEVDEDQEDGDKRWDP---DSDMDVDDD 423


>ZFIN|ZDB-GENE-040426-847 [details] [associations]
            symbol:hdac3 "histone deacetylase 3" species:7955
            "Danio rerio" [GO:0016575 "histone deacetylation" evidence=IEA]
            [GO:0004407 "histone deacetylase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0032129 "histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0031078 "histone deacetylase activity (H3-K14
            specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
            (H4-K16 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
            deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0001525 "angiogenesis" evidence=IMP] [GO:0001889 "liver
            development" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
            PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            ZFIN:ZDB-GENE-040426-847 GO:GO:0005634 GO:GO:0006355 GO:GO:0001889
            GO:GO:0006351 GO:GO:0001525 GO:GO:0070932 GO:GO:0070933
            eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 HSSP:Q9BY41
            HOVERGEN:HBG057112 CTD:8841 KO:K11404 OrthoDB:EOG4MGS79
            EMBL:BC044543 IPI:IPI00497079 RefSeq:NP_957284.1 UniGene:Dr.80607
            ProteinModelPortal:Q803C3 STRING:Q803C3 PRIDE:Q803C3 GeneID:393965
            KEGG:dre:393965 InParanoid:Q803C3 NextBio:20814936
            ArrayExpress:Q803C3 Uniprot:Q803C3
        Length = 428

 Score = 1354 (481.7 bits), Expect = 2.4e-138, P = 2.4e-138
 Identities = 240/421 (57%), Positives = 317/421 (75%)

Query:     5 DKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFH 64
             ++ +YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P+KA   ++ +FH
Sbjct:     3 NRTAYFYDPDVGNFHYGAGHPMKPHRLSLTHSLVLHYGLYKKMMVFKPYKASQHDMCRFH 62

Query:    65 SADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
             S DY++FL +++P+    F + L  +N+G DCPVF  LFEFC  Y G ++  A +LN+++
Sbjct:    63 SEDYIDFLQKVSPNNMQGFTKSLNTFNVGGDCPVFPGLFEFCSRYTGASLQGATQLNHKI 122

Query:   125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
             CDIAINWAGGLHHAKK EASGFCY+ND+V+ ILELLKYH RVLYIDID+HHGDGV+EAFY
Sbjct:   123 CDIAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYHPRVLYIDIDIHHGDGVQEAFY 182

Query:   185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
              TDRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+ +LF+ +I +
Sbjct:   183 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVIKQ 242

Query:   245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
             VV+ Y P  IVLQCGADSL  DRLGCFNLSI GH ECV FVK F +PLLV GGGGYT  N
Sbjct:   243 VVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEFVKGFKIPLLVLGGGGYTVRN 302

Query:   305 VARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQV 363
             VARCWT ET +L++  + +E+P +EY +YFAP+ +L    +  IEN NS+ YL  I+  V
Sbjct:   303 VARCWTFETSLLVEESISDELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLEQIRQTV 362

Query:   364 LENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDN 423
              ENL+ + HAPSVQ+++VP D    E   DE +P+ER  +    +  +  +EFY+GD+D+
Sbjct:   363 FENLKMLNHAPSVQIRDVPSDLLSYE-RPDEADPEERGSEENFSRP-EAANEFYDGDHDH 420

Query:   424 D 424
             D
Sbjct:   421 D 421


>FB|FBgn0025825 [details] [associations]
            symbol:Hdac3 "Histone deacetylase 3" species:7227 "Drosophila
            melanogaster" [GO:0004407 "histone deacetylase activity"
            evidence=ISS;IDA;NAS] [GO:0016575 "histone deacetylation"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0043066 "negative regulation of apoptotic
            process" evidence=IMP] [GO:0006342 "chromatin silencing"
            evidence=IGI;IMP] InterPro:IPR003084 PIRSF:PIRSF037913
            PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014297
            GO:GO:0005634 GO:GO:0005737 GO:GO:0043066 GO:GO:0006351
            GO:GO:0006342 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
            GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 GO:GO:0004407 GeneTree:ENSGT00530000062889 CTD:8841
            KO:K11404 EMBL:AY061321 EMBL:JQ663528 RefSeq:NP_651978.2
            UniGene:Dm.3642 SMR:Q7KTS4 IntAct:Q7KTS4 STRING:Q7KTS4
            EnsemblMetazoa:FBtr0078767 GeneID:44446 KEGG:dme:Dmel_CG2128
            UCSC:CG2128-RA FlyBase:FBgn0025825 InParanoid:Q7KTS4 OMA:MGPGHPE
            OrthoDB:EOG4TB2SH GenomeRNAi:44446 NextBio:837273 Uniprot:Q7KTS4
        Length = 438

 Score = 1352 (481.0 bits), Expect = 4.0e-138, P = 4.0e-138
 Identities = 243/430 (56%), Positives = 317/430 (73%)

Query:     6 KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
             ++SYFY+ DVG+ ++G  HPMKP RL +TH LV++Y LHKKM+IYRP+KA   ++ +FHS
Sbjct:     5 RVSYFYNADVGNFHYGAGHPMKPQRLAVTHSLVMNYGLHKKMKIYRPYKASAQDMLRFHS 64

Query:    66 ADYVEFLHRITPDTQHLFRQELTKY----NLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
              +Y+ +L ++TP          TKY    ++GEDCPVF+ LF+FC +Y G +++ A++LN
Sbjct:    65 DEYIAYLQQVTPQNIQCNSVAYTKYLAHFSVGEDCPVFDGLFDFCAMYTGASLEGAQKLN 124

Query:   122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
             +   DI INW+GGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDIDVHHGDGV+E
Sbjct:   125 HNHSDICINWSGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDVHHGDGVQE 184

Query:   182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
             AFY TDRVMT SFHK+G+ FFPGTGD+ EIG   G++Y++NVPLK+GIDD S+ ++FK I
Sbjct:   185 AFYLTDRVMTASFHKYGNYFFPGTGDMYEIGAESGRYYSVNVPLKEGIDDQSYFQVFKPI 244

Query:   242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
             IS +++ Y P AIVLQCGADSLAGDRLGCF+LS  GH ECV+FVK+ N+P LV GGGGYT
Sbjct:   245 ISAIMDFYRPTAIVLQCGADSLAGDRLGCFSLSTKGHGECVKFVKELNVPTLVVGGGGYT 304

Query:   302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP-NGHIENLNSKSYLSTIK 360
               NVARCWT ET +L+D ++ N++P  EY  +FAP+ +L    N   +N NSK YL  I 
Sbjct:   305 LRNVARCWTHETSLLVDQDIENDLPATEYYDFFAPDFTLHPEINSRQDNANSKQYLELIV 364

Query:   361 MQVLENLRSIQHAPSVQMQEVPPDFYIPEFD---EDEQNPDERMDQHTQDKQIQRDDEFY 417
               V ENL+  QH+PSVQM + PPD  + E     E+  +PD R+    +DK +   +EFY
Sbjct:   365 KHVYENLKMCQHSPSVQMVQTPPDVDLEELRSNREEASDPDVRISVADEDKLVDAKNEFY 424

Query:   418 EGDNDNDHMD 427
             +GD D D  D
Sbjct:   425 DGDQDQDKPD 434


>CGD|CAL0005608 [details] [associations]
            symbol:RPD31 species:5476 "Candida albicans" [GO:0036166
            "phenotypic switching" evidence=IMP] [GO:0070211 "Snt2C complex"
            evidence=IEA] [GO:0032221 "Rpd3S complex" evidence=IEA] [GO:0005829
            "cytosol" evidence=IEA] [GO:0033698 "Rpd3L complex" evidence=IEA]
            [GO:0070210 "Rpd3L-Expanded complex" evidence=IEA] [GO:0004407
            "histone deacetylase activity" evidence=IEA] [GO:0003713
            "transcription coactivator activity" evidence=IEA] [GO:0003714
            "transcription corepressor activity" evidence=IEA] [GO:0030174
            "regulation of DNA-dependent DNA replication initiation"
            evidence=IEA] [GO:0000115 "regulation of transcription involved in
            S phase of mitotic cell cycle" evidence=IEA] [GO:0030702 "chromatin
            silencing at centromere" evidence=IEA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0006368 "transcription elongation from RNA
            polymerase II promoter" evidence=IEA] [GO:0000083 "regulation of
            transcription involved in G1/S phase of mitotic cell cycle"
            evidence=IEA] [GO:0031939 "negative regulation of chromatin
            silencing at telomere" evidence=IEA] [GO:0034503 "protein
            localization to nucleolar rDNA repeats" evidence=IEA] [GO:0061408
            "positive regulation of transcription from RNA polymerase II
            promoter in response to heat stress" evidence=IEA] [GO:0061186
            "negative regulation of chromatin silencing at silent mating-type
            cassette" evidence=IEA] [GO:0030466 "chromatin silencing at silent
            mating-type cassette" evidence=IEA] [GO:0030261 "chromosome
            condensation" evidence=IEA] [GO:0034401 "regulation of
            transcription by chromatin organization" evidence=IEA] [GO:0070933
            "histone H4 deacetylation" evidence=IEA] [GO:0045128 "negative
            regulation of reciprocal meiotic recombination" evidence=IEA]
            [GO:0001302 "replicative cell aging" evidence=IEA] [GO:0061188
            "negative regulation of chromatin silencing at rDNA" evidence=IEA]
            [GO:0000117 "regulation of transcription involved in G2/M-phase of
            mitotic cell cycle" evidence=IEA] [GO:0016479 "negative regulation
            of transcription from RNA polymerase I promoter" evidence=IEA]
            [GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0051038
            "negative regulation of transcription during meiosis" evidence=IEA]
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005608
            Pfam:PF00850 INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
            GO:GO:0036166 EMBL:AACQ01000029 EMBL:AACQ01000028 GO:GO:0004407
            RefSeq:XP_719779.1 RefSeq:XP_719896.1 ProteinModelPortal:Q5ADP0
            STRING:Q5ADP0 GeneID:3638520 GeneID:3638661 KEGG:cal:CaO19.14093
            KEGG:cal:CaO19.6801 Uniprot:Q5ADP0
        Length = 577

 Score = 1326 (471.8 bits), Expect = 2.8e-137, Sum P(2) = 2.8e-137
 Identities = 235/424 (55%), Positives = 321/424 (75%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
             K +I+YFYD D+G+  +G  HPMKPHR+ M H L+++Y L+KKMEIYR   A   E+ QF
Sbjct:    17 KKRIAYFYDADIGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQF 76

Query:    64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
             H+ +Y++F+ R+ PD   LF +E  K+N+G+DCPVF+ LFE+C I  GG+++ A RLN  
Sbjct:    77 HTDEYIDFISRVNPDNLDLFTKEQIKFNVGDDCPVFDGLFEYCGISGGGSMEGAARLNRG 136

Query:   124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
              CDIAIN+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEAF
Sbjct:   137 KCDIAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAF 196

Query:   184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
             Y TDRVMT SFHK+G+ FFPGTG++++IG  +GK++++NVPL+DGIDD ++  +F+ +IS
Sbjct:   197 YTTDRVMTCSFHKYGE-FFPGTGELRDIGVGKGKYHSVNVPLRDGIDDATYKSVFEPVIS 255

Query:   244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
             K++E Y P AIVLQCG DSL+GDRLGCFNLS++GHA C+ +VK FN+P++V GGGGYT  
Sbjct:   256 KIIEWYQPSAIVLQCGGDSLSGDRLGCFNLSMNGHANCINYVKSFNIPMMVVGGGGYTMR 315

Query:   304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQV 363
             NVAR W  E+G+L + +LP+E+P NEY +Y+ P+  L + + ++ N NS  +L  I   +
Sbjct:   316 NVARTWAYESGLLNNVKLPDELPYNEYYEYYGPDYKLDVRSSNMFNQNSPEFLDKILTNI 375

Query:   364 LENLRSIQHAPSVQMQEVPPDFY-IPEFDEDEQNPDERM--DQHTQDKQIQRDDEFYEGD 420
             + NL + +HAPSVQM EVP D   + + +ED     +     + ++D QIQ D+EFYE D
Sbjct:   376 IANLENTKHAPSVQMNEVPNDPEDLGDVEEDTAMAIDTKGGSEMSRDAQIQPDNEFYE-D 434

Query:   421 NDND 424
             ++ D
Sbjct:   435 DEKD 438

 Score = 39 (18.8 bits), Expect = 2.8e-137, Sum P(2) = 2.8e-137
 Identities = 8/31 (25%), Positives = 14/31 (45%)

Query:   391 DEDEQNPDERMDQHTQDKQIQRDDEFYEGDN 421
             D+D    D+  +   + K   +D+    GDN
Sbjct:   451 DQDSMQVDKSEEPVVEQKDKPQDENNVTGDN 481


>UNIPROTKB|Q5ADP0 [details] [associations]
            symbol:RPD31 "Potential Sin3.Rpd3 histone deacetylase
            complex component Rpd3p" species:237561 "Candida albicans SC5314"
            [GO:0036166 "phenotypic switching" evidence=IMP] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005608 Pfam:PF00850
            INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
            GO:GO:0036166 EMBL:AACQ01000029 EMBL:AACQ01000028 GO:GO:0004407
            RefSeq:XP_719779.1 RefSeq:XP_719896.1 ProteinModelPortal:Q5ADP0
            STRING:Q5ADP0 GeneID:3638520 GeneID:3638661 KEGG:cal:CaO19.14093
            KEGG:cal:CaO19.6801 Uniprot:Q5ADP0
        Length = 577

 Score = 1326 (471.8 bits), Expect = 2.8e-137, Sum P(2) = 2.8e-137
 Identities = 235/424 (55%), Positives = 321/424 (75%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
             K +I+YFYD D+G+  +G  HPMKPHR+ M H L+++Y L+KKMEIYR   A   E+ QF
Sbjct:    17 KKRIAYFYDADIGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQF 76

Query:    64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
             H+ +Y++F+ R+ PD   LF +E  K+N+G+DCPVF+ LFE+C I  GG+++ A RLN  
Sbjct:    77 HTDEYIDFISRVNPDNLDLFTKEQIKFNVGDDCPVFDGLFEYCGISGGGSMEGAARLNRG 136

Query:   124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
              CDIAIN+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEAF
Sbjct:   137 KCDIAINYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAF 196

Query:   184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
             Y TDRVMT SFHK+G+ FFPGTG++++IG  +GK++++NVPL+DGIDD ++  +F+ +IS
Sbjct:   197 YTTDRVMTCSFHKYGE-FFPGTGELRDIGVGKGKYHSVNVPLRDGIDDATYKSVFEPVIS 255

Query:   244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
             K++E Y P AIVLQCG DSL+GDRLGCFNLS++GHA C+ +VK FN+P++V GGGGYT  
Sbjct:   256 KIIEWYQPSAIVLQCGGDSLSGDRLGCFNLSMNGHANCINYVKSFNIPMMVVGGGGYTMR 315

Query:   304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQV 363
             NVAR W  E+G+L + +LP+E+P NEY +Y+ P+  L + + ++ N NS  +L  I   +
Sbjct:   316 NVARTWAYESGLLNNVKLPDELPYNEYYEYYGPDYKLDVRSSNMFNQNSPEFLDKILTNI 375

Query:   364 LENLRSIQHAPSVQMQEVPPDFY-IPEFDEDEQNPDERM--DQHTQDKQIQRDDEFYEGD 420
             + NL + +HAPSVQM EVP D   + + +ED     +     + ++D QIQ D+EFYE D
Sbjct:   376 IANLENTKHAPSVQMNEVPNDPEDLGDVEEDTAMAIDTKGGSEMSRDAQIQPDNEFYE-D 434

Query:   421 NDND 424
             ++ D
Sbjct:   435 DEKD 438

 Score = 39 (18.8 bits), Expect = 2.8e-137, Sum P(2) = 2.8e-137
 Identities = 8/31 (25%), Positives = 14/31 (45%)

Query:   391 DEDEQNPDERMDQHTQDKQIQRDDEFYEGDN 421
             D+D    D+  +   + K   +D+    GDN
Sbjct:   451 DQDSMQVDKSEEPVVEQKDKPQDENNVTGDN 481


>UNIPROTKB|J9P9H5 [details] [associations]
            symbol:HDAC2 "Histone deacetylase" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
            of transcription, DNA-dependent" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
            GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
            GeneTree:ENSGT00530000062889 CTD:3066 EMBL:AAEX03008633
            RefSeq:XP_532270.3 Ensembl:ENSCAFT00000046686 GeneID:475035
            KEGG:cfa:475035 Uniprot:J9P9H5
        Length = 458

 Score = 1344 (478.2 bits), Expect = 2.8e-137, P = 2.8e-137
 Identities = 235/400 (58%), Positives = 311/400 (77%)

Query:    26 MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
             MKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS +Y++FL  I PD    + +
Sbjct:     1 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSK 60

Query:    86 ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
             ++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q  D+A+NWAGGLHHAKK EASG
Sbjct:    61 QMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASG 120

Query:   146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
             FCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPGT
Sbjct:   121 FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGT 179

Query:   206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
             GD+++IG  +GK+YA+N P++DGIDD S+ ++FK IISKV+E Y P A+VLQCGADSL+G
Sbjct:   180 GDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSG 239

Query:   266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI 325
             DRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  NVARCWT ET + LD E+PNE+
Sbjct:   240 DRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNEL 299

Query:   326 PENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPD- 384
             P N+Y +YF P+  L I   ++ N N+  Y+  IK ++ ENLR + HAP VQMQ +P D 
Sbjct:   300 PYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDA 359

Query:   385 FYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 424
              +    DED ++PD+R+     DK+I  D+EF + +++ +
Sbjct:   360 VHEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDEGE 399


>UNIPROTKB|B3KRS5 [details] [associations]
            symbol:HDAC2 "Histone deacetylase" species:9606 "Homo
            sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
            specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
            activity (H3-K18 specific)" evidence=IEA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
            [GO:0000792 "heterochromatin" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
            [GO:0005667 "transcription factor complex" evidence=IEA]
            [GO:0008284 "positive regulation of cell proliferation"
            evidence=IEA] [GO:0009913 "epidermal cell differentiation"
            evidence=IEA] [GO:0010977 "negative regulation of neuron projection
            development" evidence=IEA] [GO:0016358 "dendrite development"
            evidence=IEA] [GO:0017053 "transcriptional repressor complex"
            evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
            [GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
            "chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
            dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
            morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
            apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
            of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
            "positive regulation of sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
            formation" evidence=IEA] [GO:0061029 "eyelid development in
            camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
            formation" evidence=IEA] [GO:0090090 "negative regulation of
            canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
            "regulation of protein deacetylation" evidence=IEA] [GO:0005634
            "nucleus" evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913
            PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
            GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
            EMBL:CH471051 GO:GO:0016358 GO:GO:0003700 GO:GO:0006351
            GO:GO:0005667 GO:GO:0000122 GO:GO:0000790 GO:GO:0048714
            GO:GO:0042475 GO:GO:0090090 GO:GO:0042733 GO:GO:0061029
            GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
            GO:GO:0070933 GO:GO:0005657 GO:GO:0060789 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            HOGENOM:HOG000225180 GO:GO:0010977 GO:GO:0061198 HOVERGEN:HBG057112
            EMBL:AL590398 EMBL:AL671967 UniGene:Hs.3352 HGNC:HGNC:4853
            EMBL:AK092156 IPI:IPI00972999 SMR:B3KRS5 STRING:B3KRS5
            Ensembl:ENST00000368632 Ensembl:ENST00000519108 Uniprot:B3KRS5
        Length = 458

 Score = 1344 (478.2 bits), Expect = 2.8e-137, P = 2.8e-137
 Identities = 235/400 (58%), Positives = 311/400 (77%)

Query:    26 MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
             MKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS +Y++FL  I PD    + +
Sbjct:     1 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSK 60

Query:    86 ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
             ++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q  D+A+NWAGGLHHAKK EASG
Sbjct:    61 QMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMAVNWAGGLHHAKKSEASG 120

Query:   146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
             FCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPGT
Sbjct:   121 FCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGT 179

Query:   206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
             GD+++IG  +GK+YA+N P++DGIDD S+ ++FK IISKV+E Y P A+VLQCGADSL+G
Sbjct:   180 GDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIISKVMEMYQPSAVVLQCGADSLSG 239

Query:   266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI 325
             DRLGCFNL++ GHA+CV  VK FNLPLL+ GGGGYT  NVARCWT ET + LD E+PNE+
Sbjct:   240 DRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIRNVARCWTYETAVALDCEIPNEL 299

Query:   326 PENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPD- 384
             P N+Y +YF P+  L I   ++ N N+  Y+  IK ++ ENLR + HAP VQMQ +P D 
Sbjct:   300 PYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLPHAPGVQMQAIPEDA 359

Query:   385 FYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 424
              +    DED ++PD+R+     DK+I  D+EF + +++ +
Sbjct:   360 VHEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDEGE 399


>ASPGD|ASPL0000073195 [details] [associations]
            symbol:rpdA species:162425 "Emericella nidulans"
            [GO:0004407 "histone deacetylase activity" evidence=ISA;IMP;IDA]
            [GO:0016575 "histone deacetylation" evidence=ISA;IDA] [GO:0070932
            "histone H3 deacetylation" evidence=IMP] [GO:0070933 "histone H4
            deacetylation" evidence=IMP] [GO:0030174 "regulation of
            DNA-dependent DNA replication initiation" evidence=IEA] [GO:0000115
            "regulation of transcription involved in S phase of mitotic cell
            cycle" evidence=IEA] [GO:0016049 "cell growth" evidence=IEA]
            [GO:0030702 "chromatin silencing at centromere" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0006368 "transcription
            elongation from RNA polymerase II promoter" evidence=IEA]
            [GO:0000083 "regulation of transcription involved in G1/S phase of
            mitotic cell cycle" evidence=IEA] [GO:0031939 "negative regulation
            of chromatin silencing at telomere" evidence=IEA] [GO:0034503
            "protein localization to nucleolar rDNA repeats" evidence=IEA]
            [GO:0061408 "positive regulation of transcription from RNA
            polymerase II promoter in response to heat stress" evidence=IEA]
            [GO:0061186 "negative regulation of chromatin silencing at silent
            mating-type cassette" evidence=IEA] [GO:0030261 "chromosome
            condensation" evidence=IEA] [GO:0030466 "chromatin silencing at
            silent mating-type cassette" evidence=IEA] [GO:0043936 "asexual
            sporulation resulting in formation of a cellular spore"
            evidence=IEA] [GO:0034401 "regulation of transcription by chromatin
            organization" evidence=IEA] [GO:0045128 "negative regulation of
            reciprocal meiotic recombination" evidence=IEA] [GO:0001302
            "replicative cell aging" evidence=IEA] [GO:0061188 "negative
            regulation of chromatin silencing at rDNA" evidence=IEA]
            [GO:0000117 "regulation of transcription involved in G2/M-phase of
            mitotic cell cycle" evidence=IEA] [GO:0016479 "negative regulation
            of transcription from RNA polymerase I promoter" evidence=IEA]
            [GO:0051038 "negative regulation of transcription during meiosis"
            evidence=IEA] [GO:0003714 "transcription corepressor activity"
            evidence=IEA] [GO:0003713 "transcription coactivator activity"
            evidence=IEA] [GO:0070211 "Snt2C complex" evidence=IEA] [GO:0032221
            "Rpd3S complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0033698 "Rpd3L complex" evidence=IEA] [GO:0070210
            "Rpd3L-Expanded complex" evidence=IEA] InterPro:IPR003084
            PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 EMBL:BN001303
            EMBL:AACD01000078 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
            GO:GO:0004407 RefSeq:XP_662097.1 ProteinModelPortal:G5EB64
            EnsemblFungi:CADANIAT00005952 GeneID:2872294 KEGG:ani:AN4493.2
            OMA:APDYELD Uniprot:G5EB64
        Length = 687

 Score = 1328 (472.5 bits), Expect = 1.4e-135, P = 1.4e-135
 Identities = 240/435 (55%), Positives = 324/435 (74%)

Query:     2 RSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELA 61
             RSK +++YFYD DVG+  +   HPMKPHR+ MTH LV++Y L+KKMEIYR   A   E+ 
Sbjct:    24 RSK-RVAYFYDSDVGNYAYVSGHPMKPHRIRMTHSLVMNYSLYKKMEIYRAKPASKFEMT 82

Query:    62 QFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
             QFH+ +Y++FL ++TPD    F +E +KYN+G+DCPVF+ LFEFC I AGG+++ A RLN
Sbjct:    83 QFHTDEYIDFLSKVTPDNMDAFAKEQSKYNVGDDCPVFDGLFEFCGISAGGSMEGAARLN 142

Query:   122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
                CDIA+NWAGGLHHAKK EASGFCY+ND+VLGILELL++  RVLY+DIDVHHGDGVEE
Sbjct:   143 RNKCDIAVNWAGGLHHAKKSEASGFCYVNDIVLGILELLRFKQRVLYVDIDVHHGDGVEE 202

Query:   182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
             AFY TDRVMTVSFHK+G+ +FPGTG++++IG  +GK+YA+N PL+DGIDD S+  +F+ +
Sbjct:   203 AFYTTDRVMTVSFHKYGE-YFPGTGELRDIGVGQGKYYAVNFPLRDGIDDVSYKSIFEPV 261

Query:   242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
             I  V+E Y P A+VLQCG DSL+GDRLGCFNLS+ GHA CV++VK FNLP L+ GGGGYT
Sbjct:   262 IKSVMEWYRPEAVVLQCGGDSLSGDRLGCFNLSMRGHANCVKYVKSFNLPTLIVGGGGYT 321

Query:   302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKM 361
               NVAR W  ETGIL+   L +E+P N+Y +YFAP+  L +   +++N N++ YL  I+ 
Sbjct:   322 MRNVARTWAFETGILVGDNLGSELPYNDYYEYFAPDYELDVRPSNMDNANTREYLDKIRT 381

Query:   362 QVLENLRSIQHAPSVQMQEVP--P---------DFYIPEFDEDEQNPDERMDQHTQDKQI 410
             QV+ENL+    APSVQM +VP  P         +  + + DEDE N D+R  +   D+ +
Sbjct:   382 QVVENLKRTAFAPSVQMTDVPREPLVDGMDDEAEAALDDLDEDE-NKDKRFTKRRFDQYV 440

Query:   411 QRDDEFYEGDNDNDH 425
             ++  E  + ++++++
Sbjct:   441 EKPGELSDSEDEDEN 455


>WB|WBGene00001834 [details] [associations]
            symbol:hda-1 species:6239 "Caenorhabditis elegans"
            [GO:0016575 "histone deacetylation" evidence=IEA;IDA] [GO:0004407
            "histone deacetylase activity" evidence=IEA;IDA] [GO:0009792
            "embryo development ending in birth or egg hatching" evidence=IMP]
            [GO:0000003 "reproduction" evidence=IMP] [GO:0008406 "gonad
            development" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
            development" evidence=IMP] [GO:0006974 "response to DNA damage
            stimulus" evidence=IMP] [GO:0040027 "negative regulation of vulval
            development" evidence=IGI;IMP] [GO:0006898 "receptor-mediated
            endocytosis" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
            [GO:0002119 "nematode larval development" evidence=IMP] [GO:0006915
            "apoptotic process" evidence=IMP] [GO:0045595 "regulation of cell
            differentiation" evidence=IGI] [GO:0046580 "negative regulation of
            Ras protein signal transduction" evidence=IGI] [GO:0000122
            "negative regulation of transcription from RNA polymerase II
            promoter" evidence=IMP] [GO:0045746 "negative regulation of Notch
            signaling pathway" evidence=IMP] [GO:0048557 "embryonic digestive
            tract morphogenesis" evidence=IGI] [GO:0000118 "histone deacetylase
            complex" evidence=IPI] [GO:0016581 "NuRD complex" evidence=IPI]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0043073 "germ cell nucleus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0003714
            "transcription corepressor activity" evidence=IPI] [GO:0045138
            "tail tip morphogenesis" evidence=IMP] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
            GO:GO:0006915 GO:GO:0008406 GO:GO:0002119 GO:GO:0045595
            GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 EMBL:Z81486 GO:GO:0040035
            GO:GO:0045138 GO:GO:0040027 GO:GO:0070932 GO:GO:0070933
            GO:GO:0045746 GO:GO:0046580 GO:GO:0016581 eggNOG:COG0123
            GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0043073
            GO:GO:0048557 GO:GO:0004407 PIR:T20163 RefSeq:NP_506599.1
            ProteinModelPortal:O17695 SMR:O17695 DIP:DIP-26427N IntAct:O17695
            MINT:MINT-226391 STRING:O17695 PaxDb:O17695
            EnsemblMetazoa:C53A5.3.1 EnsemblMetazoa:C53A5.3.2 GeneID:179959
            KEGG:cel:CELE_C53A5.3 UCSC:C53A5.3.1 CTD:179959 WormBase:C53A5.3
            GeneTree:ENSGT00530000062889 InParanoid:O17695 OMA:ENDTKVQ
            NextBio:907546 Uniprot:O17695
        Length = 461

 Score = 1324 (471.1 bits), Expect = 3.7e-135, P = 3.7e-135
 Identities = 235/425 (55%), Positives = 312/425 (73%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
             K +++Y+YD ++G+ Y+G  H MKPHR+ MTHHLVL+Y L++ +EI+RP  A   ++ +F
Sbjct:    12 KRRVAYYYDSNIGNYYYGQGHVMKPHRIRMTHHLVLNYGLYRNLEIFRPFPASFEDMTRF 71

Query:    64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
             HS +Y+ FL    PD    F +++ K+N+GEDCP+F+ L+EFCQ+ +GG++ AA +LN Q
Sbjct:    72 HSDEYMTFLKSANPDNLKSFNKQMLKFNVGEDCPLFDGLYEFCQLSSGGSLAAATKLNKQ 131

Query:   124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
               DIAINW GGLHHAKK EASGFCY ND+VLGILELLKYH RVLY+DIDVHHGDGVEEAF
Sbjct:   132 KVDIAINWMGGLHHAKKSEASGFCYTNDIVLGILELLKYHKRVLYVDIDVHHGDGVEEAF 191

Query:   184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
             Y TDRVMTVSFHK+GD FFPGTGD+K+IG  +GK Y++NVPL+DGI D S+  +FK I++
Sbjct:   192 YTTDRVMTVSFHKYGD-FFPGTGDLKDIGAGKGKLYSVNVPLRDGITDVSYQSIFKPIMT 250

Query:   244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
             KV+E + P A+VLQCGADSL GDRLG FNL++ GH EC RF + +N+PL++ GGGGYT  
Sbjct:   251 KVMERFDPCAVVLQCGADSLNGDRLGPFNLTLKGHGECARFFRSYNVPLMMVGGGGYTPR 310

Query:   304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQV 363
             NVARCWT ET I +D E+PNE+P N+Y +YF P   L I + +  N NS   L+ ++  V
Sbjct:   311 NVARCWTYETSIAVDKEVPNELPYNDYFEYFGPNYRLHIESSNAANENSSDMLAKLQTDV 370

Query:   364 LENLRSIQHAPSVQMQEVPPDFYIPEFDE----DEQNPDERMDQHTQDKQIQRDDEFYEG 419
             + NL  +   PSVQM+ +P D      D+    D+ NPD+R+     D  IQ D +FY+G
Sbjct:   371 IANLEQLTFVPSVQMRPIPEDALSALNDDSLIADQANPDKRLPPQITDGMIQDDGDFYDG 430

Query:   420 DNDND 424
             + + D
Sbjct:   431 EREGD 435


>UNIPROTKB|O17695 [details] [associations]
            symbol:hda-1 "Histone deacetylase 1" species:6239
            "Caenorhabditis elegans" [GO:0005515 "protein binding"
            evidence=IPI] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009792 GO:GO:0006898
            GO:GO:0005737 GO:GO:0040007 GO:GO:0006915 GO:GO:0008406
            GO:GO:0002119 GO:GO:0045595 GO:GO:0006351 GO:GO:0006974
            GO:GO:0000122 EMBL:Z81486 GO:GO:0040035 GO:GO:0045138 GO:GO:0040027
            GO:GO:0070932 GO:GO:0070933 GO:GO:0045746 GO:GO:0046580
            GO:GO:0016581 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
            GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
            GO:GO:0043073 GO:GO:0048557 GO:GO:0004407 PIR:T20163
            RefSeq:NP_506599.1 ProteinModelPortal:O17695 SMR:O17695
            DIP:DIP-26427N IntAct:O17695 MINT:MINT-226391 STRING:O17695
            PaxDb:O17695 EnsemblMetazoa:C53A5.3.1 EnsemblMetazoa:C53A5.3.2
            GeneID:179959 KEGG:cel:CELE_C53A5.3 UCSC:C53A5.3.1 CTD:179959
            WormBase:C53A5.3 GeneTree:ENSGT00530000062889 InParanoid:O17695
            OMA:ENDTKVQ NextBio:907546 Uniprot:O17695
        Length = 461

 Score = 1324 (471.1 bits), Expect = 3.7e-135, P = 3.7e-135
 Identities = 235/425 (55%), Positives = 312/425 (73%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
             K +++Y+YD ++G+ Y+G  H MKPHR+ MTHHLVL+Y L++ +EI+RP  A   ++ +F
Sbjct:    12 KRRVAYYYDSNIGNYYYGQGHVMKPHRIRMTHHLVLNYGLYRNLEIFRPFPASFEDMTRF 71

Query:    64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
             HS +Y+ FL    PD    F +++ K+N+GEDCP+F+ L+EFCQ+ +GG++ AA +LN Q
Sbjct:    72 HSDEYMTFLKSANPDNLKSFNKQMLKFNVGEDCPLFDGLYEFCQLSSGGSLAAATKLNKQ 131

Query:   124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
               DIAINW GGLHHAKK EASGFCY ND+VLGILELLKYH RVLY+DIDVHHGDGVEEAF
Sbjct:   132 KVDIAINWMGGLHHAKKSEASGFCYTNDIVLGILELLKYHKRVLYVDIDVHHGDGVEEAF 191

Query:   184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
             Y TDRVMTVSFHK+GD FFPGTGD+K+IG  +GK Y++NVPL+DGI D S+  +FK I++
Sbjct:   192 YTTDRVMTVSFHKYGD-FFPGTGDLKDIGAGKGKLYSVNVPLRDGITDVSYQSIFKPIMT 250

Query:   244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
             KV+E + P A+VLQCGADSL GDRLG FNL++ GH EC RF + +N+PL++ GGGGYT  
Sbjct:   251 KVMERFDPCAVVLQCGADSLNGDRLGPFNLTLKGHGECARFFRSYNVPLMMVGGGGYTPR 310

Query:   304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQV 363
             NVARCWT ET I +D E+PNE+P N+Y +YF P   L I + +  N NS   L+ ++  V
Sbjct:   311 NVARCWTYETSIAVDKEVPNELPYNDYFEYFGPNYRLHIESSNAANENSSDMLAKLQTDV 370

Query:   364 LENLRSIQHAPSVQMQEVPPDFYIPEFDE----DEQNPDERMDQHTQDKQIQRDDEFYEG 419
             + NL  +   PSVQM+ +P D      D+    D+ NPD+R+     D  IQ D +FY+G
Sbjct:   371 IANLEQLTFVPSVQMRPIPEDALSALNDDSLIADQANPDKRLPPQITDGMIQDDGDFYDG 430

Query:   420 DNDND 424
             + + D
Sbjct:   431 EREGD 435


>UNIPROTKB|F1MFZ7 [details] [associations]
            symbol:HDAC2 "Histone deacetylase" species:9913 "Bos
            taurus" [GO:0090311 "regulation of protein deacetylation"
            evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
            receptor signaling pathway" evidence=IEA] [GO:0061198 "fungiform
            papilla formation" evidence=IEA] [GO:0061029 "eyelid development in
            camera-type eye" evidence=IEA] [GO:0060789 "hair follicle placode
            formation" evidence=IEA] [GO:0051091 "positive regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0048714 "positive regulation of oligodendrocyte
            differentiation" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045862 "positive regulation of proteolysis" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0043433 "negative regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043066 "negative
            regulation of apoptotic process" evidence=IEA] [GO:0042733
            "embryonic digit morphogenesis" evidence=IEA] [GO:0042475
            "odontogenesis of dentin-containing tooth" evidence=IEA]
            [GO:0035098 "ESC/E(Z) complex" evidence=IEA] [GO:0031490 "chromatin
            DNA binding" evidence=IEA] [GO:0021766 "hippocampus development"
            evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
            [GO:0016581 "NuRD complex" evidence=IEA] [GO:0016580 "Sin3 complex"
            evidence=IEA] [GO:0016358 "dendrite development" evidence=IEA]
            [GO:0010977 "negative regulation of neuron projection development"
            evidence=IEA] [GO:0010870 "positive regulation of receptor
            biosynthetic process" evidence=IEA] [GO:0009913 "epidermal cell
            differentiation" evidence=IEA] [GO:0008284 "positive regulation of
            cell proliferation" evidence=IEA] [GO:0008134 "transcription factor
            binding" evidence=IEA] [GO:0006344 "maintenance of chromatin
            silencing" evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IEA] [GO:0005657 "replication fork" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0097372 "NAD-dependent
            histone deacetylase activity (H3-K18 specific)" evidence=IEA]
            [GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
            specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0032041
            "NAD-dependent histone deacetylase activity (H3-K14 specific)"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0021766 GO:GO:0043066
            GO:GO:0008284 GO:GO:0043565 GO:GO:0045944 GO:GO:0016358
            GO:GO:0003700 GO:GO:0006351 GO:GO:0005667 GO:GO:0000122
            GO:GO:0048714 GO:GO:0042475 GO:GO:0035098 GO:GO:0043433
            GO:GO:0090090 GO:GO:0045862 GO:GO:0042733 GO:GO:0061029
            GO:GO:0031490 GO:GO:0009913 GO:GO:0000792 GO:GO:0070932
            GO:GO:0070933 GO:GO:0005657 GO:GO:0016581 GO:GO:0060789
            GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 GO:GO:0016580 GO:GO:0010977 GO:GO:0061198
            GO:GO:0006344 GO:GO:0010870 GeneTree:ENSGT00530000062889
            EMBL:DAAA02025851 EMBL:DAAA02025850 IPI:IPI00728951
            Ensembl:ENSBTAT00000015734 OMA:XYHQRVL Uniprot:F1MFZ7
        Length = 488

 Score = 1313 (467.3 bits), Expect = 5.4e-134, P = 5.4e-134
 Identities = 229/422 (54%), Positives = 312/422 (73%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
             K K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++
Sbjct:     9 KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68

Query:    64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
             HS +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct:    69 HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128

Query:   124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
               D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct:   129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188

Query:   184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
             Y TDRVMTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N P++DGIDD S+ ++FK +I+
Sbjct:   189 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPVIT 247

Query:   244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
             K+ E   P  + L+      AGD+   F   + GHA+CV  VK FNLPLL+ GGGGYT  
Sbjct:   248 KIGEITFPTKVCLEIQPVHSAGDQFWVFVYCVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 307

Query:   304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQV 363
             NVARCWT ET + LD E+PNE+P N+Y +YF P+  L I   ++ N N+  Y+  IK ++
Sbjct:   308 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRL 367

Query:   364 LENLRSIQHAPSVQMQEVPPD-FYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDND 422
              ENLR + HAP VQMQ +P D  +    DED ++PD+R+     DK+I  D+EF + +++
Sbjct:   368 FENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDE 427

Query:   423 ND 424
              +
Sbjct:   428 GE 429


>SGD|S000005274 [details] [associations]
            symbol:RPD3 "Histone deacetylase" species:4932 "Saccharomyces
            cerevisiae" [GO:0004407 "histone deacetylase activity"
            evidence=IEA;IDA;IMP] [GO:0003714 "transcription corepressor
            activity" evidence=IMP;IPI] [GO:0061408 "positive regulation of
            transcription from RNA polymerase II promoter in response to heat
            stress" evidence=IMP] [GO:0003713 "transcription coactivator
            activity" evidence=IMP;IPI] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IGI;IMP]
            [GO:0030174 "regulation of DNA-dependent DNA replication
            initiation" evidence=IGI;IMP] [GO:0051038 "negative regulation of
            transcription during meiosis" evidence=IMP] [GO:0034503 "protein
            localization to nucleolar rDNA repeats" evidence=IMP] [GO:0033698
            "Rpd3L complex" evidence=IDA] [GO:0000118 "histone deacetylase
            complex" evidence=IDA] [GO:0016239 "positive regulation of
            macroautophagy" evidence=IMP] [GO:0097372 "NAD-dependent histone
            deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
            "histone H4 deacetylation" evidence=IMP] [GO:0070932 "histone H3
            deacetylation" evidence=IMP] [GO:0000115 "regulation of
            transcription involved in S phase of mitotic cell cycle"
            evidence=IMP] [GO:0045128 "negative regulation of reciprocal
            meiotic recombination" evidence=IMP] [GO:0016479 "negative
            regulation of transcription from RNA polymerase I promoter"
            evidence=IMP] [GO:0031939 "negative regulation of chromatin
            silencing at telomere" evidence=IDA;IMP] [GO:0000083 "regulation of
            transcription involved in G1/S phase of mitotic cell cycle"
            evidence=IGI;IPI] [GO:0006368 "transcription elongation from RNA
            polymerase II promoter" evidence=IGI] [GO:0000117 "regulation of
            transcription involved in G2/M-phase of mitotic cell cycle"
            evidence=IGI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
            modification" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0034401 "regulation of transcription by chromatin
            organization" evidence=IMP] [GO:0001302 "replicative cell aging"
            evidence=IMP] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IGI;IMP;IPI] [GO:0032221
            "Rpd3S complex" evidence=IDA] [GO:0061186 "negative regulation of
            chromatin silencing at silent mating-type cassette" evidence=IMP]
            [GO:0061188 "negative regulation of chromatin silencing at rDNA"
            evidence=IMP] [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
            [GO:0070211 "Snt2C complex" evidence=IDA] [GO:0070822 "Sin3-type
            complex" evidence=IDA] [GO:0031078 "histone deacetylase activity
            (H3-K14 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
            deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
            "histone deacetylase activity (H3-K9 specific)" evidence=IEA]
            [GO:0034739 "histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
            activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
            histone deacetylase activity (H4-K16 specific)" evidence=IEA]
            [GO:0016575 "histone deacetylation" evidence=IEA]
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 SGD:S000005274
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714
            EMBL:X83226 EMBL:BK006947 GO:GO:0001302 GO:GO:0000122 GO:GO:0000115
            GO:GO:0003713 GO:GO:0034401 GO:GO:0006368 GO:GO:0061408
            GO:GO:0034503 GO:GO:0033698 GO:GO:0070210 GO:GO:0045128 EMBL:Z46259
            GO:GO:0070932 GO:GO:0000083 GO:GO:0000117 GO:GO:0070933
            GO:GO:0051038 GO:GO:0030174 eggNOG:COG0123 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            HOGENOM:HOG000225180 KO:K06067 OrthoDB:EOG4RV60J GO:GO:0032221
            GO:GO:0061188 GO:GO:0061186 GO:GO:0031939 GO:GO:0070211
            GO:GO:0004407 GeneTree:ENSGT00530000062889 EMBL:Z71605
            GO:GO:0016479 EMBL:S66438 EMBL:Z71606 EMBL:AY692813 PIR:S22284
            RefSeq:NP_014069.1 ProteinModelPortal:P32561 SMR:P32561
            DIP:DIP-681N IntAct:P32561 MINT:MINT-614075 STRING:P32561
            PaxDb:P32561 PeptideAtlas:P32561 EnsemblFungi:YNL330C GeneID:855386
            KEGG:sce:YNL330C CYGD:YNL330c OMA:IPEDAPH NextBio:979187
            Genevestigator:P32561 GermOnline:YNL330C Uniprot:P32561
        Length = 433

 Score = 1286 (457.8 bits), Expect = 3.9e-131, P = 3.9e-131
 Identities = 223/417 (53%), Positives = 308/417 (73%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
             K +++YFYD DVG+  +G  HPMKPHR+ M H L+++Y L+KKMEIYR   A   E+ QF
Sbjct:    18 KRRVAYFYDADVGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQF 77

Query:    64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
             H+ +Y++FL R+TPD   +F++E  K+N+G+DCPVF+ L+E+C I  GG+++ A RLN  
Sbjct:    78 HTDEYIDFLSRVTPDNLEMFKRESVKFNVGDDCPVFDGLYEYCSISGGGSMEGAARLNRG 137

Query:   124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
              CD+A+N+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEAF
Sbjct:   138 KCDVAVNYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAF 197

Query:   184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
             Y TDRVMT SFHK+G+ FFPGTG++++IG   GK YA+NVPL+DGIDD ++  +F+ +I 
Sbjct:   198 YTTDRVMTCSFHKYGE-FFPGTGELRDIGVGAGKNYAVNVPLRDGIDDATYRSVFEPVIK 256

Query:   244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
             K++E Y P A+VLQCG DSL+GDRLGCFNLS++GHA CV +VK F +P++V GGGGYT  
Sbjct:   257 KIMEWYQPSAVVLQCGGDSLSGDRLGCFNLSMEGHANCVNYVKSFGIPMMVVGGGGYTMR 316

Query:   304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQV 363
             NVAR W  ETG+L +  L  ++P NEY +Y+ P+  L +   ++ N+N+  YL  +   +
Sbjct:   317 NVARTWCFETGLLNNVVLDKDLPYNEYYEYYGPDYKLSVRPSNMFNVNTPEYLDKVMTNI 376

Query:   364 LENLRSIQHAPSVQMQEVPPDFY-IPEFDED--EQNPDERMDQHTQDKQIQRDDEFY 417
               NL + ++APSVQ+   P D   + + +ED  E    +   Q+ +D  ++ D+EFY
Sbjct:   377 FANLENTKYAPSVQLNHTPRDAEDLGDVEEDSAEAKDTKGGSQYARDLHVEHDNEFY 433


>CGD|CAL0005111 [details] [associations]
            symbol:RPD3 species:5476 "Candida albicans" [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=IMP] [GO:0004407 "histone deacetylase activity"
            evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0036166 "phenotypic switching" evidence=IMP] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0005111 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006357 GO:GO:0006351
            EMBL:AACQ01000080 EMBL:AACQ01000079 GO:GO:0070932 GO:GO:0070933
            eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067 GO:GO:0036166
            GO:GO:0004407 RefSeq:XP_715765.1 RefSeq:XP_715815.1
            ProteinModelPortal:Q5A209 STRING:Q5A209 GeneID:3642513
            GeneID:3642580 KEGG:cal:CaO19.10352 KEGG:cal:CaO19.2834
            Uniprot:Q5A209
        Length = 480

 Score = 1285 (457.4 bits), Expect = 5.0e-131, P = 5.0e-131
 Identities = 237/424 (55%), Positives = 310/424 (73%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
             K +++YFYD DVG+ ++G  H MKPHR+ M H L+++Y+L+KKMEIYR   A  +EL QF
Sbjct:    16 KRRVAYFYDQDVGNYFYGTGHCMKPHRIRMAHSLIMNYELYKKMEIYRAQPATNLELTQF 75

Query:    64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
             H+ +Y++F+ R+TPD  HLF +E   +N+G+DCPVF+ L EFC+I  GG+++ A RLN  
Sbjct:    76 HTDEYIDFIDRVTPDNLHLFEREQVIFNVGDDCPVFDGLGEFCKISCGGSMEGAARLNRG 135

Query:   124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
               DIAIN+AGGLHHAKK EASGFCY ND+VLGI+ELL+YH RVLYID DVHHGDGVEEAF
Sbjct:   136 QADIAINYAGGLHHAKKSEASGFCYTNDIVLGIIELLRYHPRVLYIDTDVHHGDGVEEAF 195

Query:   184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
             Y  DRVMT SFHKFG+ FFPGTG++ +IG  +GK++AIN+PL+DGIDD S+  +F+ II+
Sbjct:   196 YTNDRVMTCSFHKFGE-FFPGTGNLTDIGIGKGKYHAINIPLRDGIDDASYKSIFEPIIT 254

Query:   244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
             K++E Y P AIVLQCG DSL+GDRLG FNLS+ GHA CV FV+   +P++V GGGGYT  
Sbjct:   255 KIMEWYQPSAIVLQCGGDSLSGDRLGPFNLSMRGHANCVNFVRSLGVPVMVLGGGGYTIR 314

Query:   304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQV 363
             NVAR W  ETG+     LP E+P N Y +Y+AP   L + + ++ N NSK YL  I  QV
Sbjct:   315 NVARTWAFETGVCNGEILPKELPYNGYYEYYAPTYELDVRSANMTNANSKEYLDKILTQV 374

Query:   364 LENLRSIQHAPSVQMQEVPPDFY-IPEFDEDEQNPDERM--DQHTQDKQIQRDDEFYEGD 420
             + NL + +H PSVQM EVP D   + + DED  +  +     Q  +DK +Q D EFY+ D
Sbjct:   375 ISNLDNTKHTPSVQMNEVPLDMEDLGDVDEDMPDAIDTKGGSQFAKDKLVQADGEFYD-D 433

Query:   421 NDND 424
             ++ D
Sbjct:   434 DEKD 437


>UNIPROTKB|Q5A209 [details] [associations]
            symbol:RPD3 "Histone deacetylase" species:237561 "Candida
            albicans SC5314" [GO:0004407 "histone deacetylase activity"
            evidence=ISS] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0006357 "regulation of transcription from RNA polymerase II
            promoter" evidence=IMP] [GO:0036166 "phenotypic switching"
            evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
            CGD:CAL0005111 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
            GO:GO:0006357 GO:GO:0006351 EMBL:AACQ01000080 EMBL:AACQ01000079
            GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 KO:K06067
            GO:GO:0036166 GO:GO:0004407 RefSeq:XP_715765.1 RefSeq:XP_715815.1
            ProteinModelPortal:Q5A209 STRING:Q5A209 GeneID:3642513
            GeneID:3642580 KEGG:cal:CaO19.10352 KEGG:cal:CaO19.2834
            Uniprot:Q5A209
        Length = 480

 Score = 1285 (457.4 bits), Expect = 5.0e-131, P = 5.0e-131
 Identities = 237/424 (55%), Positives = 310/424 (73%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
             K +++YFYD DVG+ ++G  H MKPHR+ M H L+++Y+L+KKMEIYR   A  +EL QF
Sbjct:    16 KRRVAYFYDQDVGNYFYGTGHCMKPHRIRMAHSLIMNYELYKKMEIYRAQPATNLELTQF 75

Query:    64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
             H+ +Y++F+ R+TPD  HLF +E   +N+G+DCPVF+ L EFC+I  GG+++ A RLN  
Sbjct:    76 HTDEYIDFIDRVTPDNLHLFEREQVIFNVGDDCPVFDGLGEFCKISCGGSMEGAARLNRG 135

Query:   124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
               DIAIN+AGGLHHAKK EASGFCY ND+VLGI+ELL+YH RVLYID DVHHGDGVEEAF
Sbjct:   136 QADIAINYAGGLHHAKKSEASGFCYTNDIVLGIIELLRYHPRVLYIDTDVHHGDGVEEAF 195

Query:   184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
             Y  DRVMT SFHKFG+ FFPGTG++ +IG  +GK++AIN+PL+DGIDD S+  +F+ II+
Sbjct:   196 YTNDRVMTCSFHKFGE-FFPGTGNLTDIGIGKGKYHAINIPLRDGIDDASYKSIFEPIIT 254

Query:   244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
             K++E Y P AIVLQCG DSL+GDRLG FNLS+ GHA CV FV+   +P++V GGGGYT  
Sbjct:   255 KIMEWYQPSAIVLQCGGDSLSGDRLGPFNLSMRGHANCVNFVRSLGVPVMVLGGGGYTIR 314

Query:   304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQV 363
             NVAR W  ETG+     LP E+P N Y +Y+AP   L + + ++ N NSK YL  I  QV
Sbjct:   315 NVARTWAFETGVCNGEILPKELPYNGYYEYYAPTYELDVRSANMTNANSKEYLDKILTQV 374

Query:   364 LENLRSIQHAPSVQMQEVPPDFY-IPEFDEDEQNPDERM--DQHTQDKQIQRDDEFYEGD 420
             + NL + +H PSVQM EVP D   + + DED  +  +     Q  +DK +Q D EFY+ D
Sbjct:   375 ISNLDNTKHTPSVQMNEVPLDMEDLGDVDEDMPDAIDTKGGSQFAKDKLVQADGEFYD-D 433

Query:   421 NDND 424
             ++ D
Sbjct:   434 DEKD 437


>WB|WBGene00001836 [details] [associations]
            symbol:hda-3 species:6239 "Caenorhabditis elegans"
            [GO:0016575 "histone deacetylation" evidence=IEA;ISS] [GO:0004407
            "histone deacetylase activity" evidence=IEA;ISS] [GO:0006974
            "response to DNA damage stimulus" evidence=IMP] [GO:0016246 "RNA
            interference" evidence=IMP] [GO:0042262 "DNA protection"
            evidence=IMP] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=ISS] [GO:0016568
            "chromatin modification" evidence=ISS] [GO:0000118 "histone
            deacetylase complex" evidence=ISS] [GO:0003714 "transcription
            corepressor activity" evidence=ISS] [GO:0005634 "nucleus"
            evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0003714 GO:GO:0016246
            GO:GO:0042262 GO:GO:0006974 GO:GO:0000122 GO:GO:0000118
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 KO:K06067 GO:GO:0004407 OMA:WFGGPLL
            GeneTree:ENSGT00530000062889 EMBL:Z81108 EMBL:Z81106 PIR:T23963
            RefSeq:NP_493026.1 HSSP:O67135 ProteinModelPortal:G5ECH0 SMR:G5ECH0
            IntAct:G5ECH0 EnsemblMetazoa:R06C1.1.1 EnsemblMetazoa:R06C1.1.2
            GeneID:173074 KEGG:cel:CELE_R06C1.1 CTD:173074 WormBase:R06C1.1
            NextBio:878171 Uniprot:G5ECH0
        Length = 465

 Score = 1280 (455.6 bits), Expect = 1.7e-130, P = 1.7e-130
 Identities = 227/424 (53%), Positives = 309/424 (72%)

Query:     3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
             SK ++SY+YDGD G+ Y+G  HPMKPHR+ MTH L+++Y L++K+ + RP +A   E+ +
Sbjct:     6 SKSRVSYYYDGDFGNFYYGQGHPMKPHRVRMTHSLIVNYGLYRKLNVMRPARASFSEITR 65

Query:    63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
             +HS DY+ FL  +  D    F  ++ ++++GEDCPVF+ ++EFCQ+  GG++ AA RLN 
Sbjct:    66 YHSDDYINFLRNVKSDNMSTFTDQMARFSVGEDCPVFDGMYEFCQLSCGGSLAAAARLNR 125

Query:   123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             Q  +IAINW GGLHHAKK EASGFCY ND+VL ILELLK+H RVLYIDIDVHHGDGVEEA
Sbjct:   126 QESEIAINWMGGLHHAKKSEASGFCYSNDIVLAILELLKHHKRVLYIDIDVHHGDGVEEA 185

Query:   183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
             FY TDRVMTVSFHK G+ +FPGTGD+K++G   GK+YA+NVPL+DG+DD ++ R+F+TI+
Sbjct:   186 FYTTDRVMTVSFHKHGE-YFPGTGDLKDVGAGSGKYYALNVPLRDGVDDVTYERIFRTIM 244

Query:   243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
              +V+  + P A+VLQCGADSLAGDRLG FNL+  GH +CV ++K FN+PLL+ GGGGYT 
Sbjct:   245 GEVMARFQPEAVVLQCGADSLAGDRLGVFNLTTYGHGKCVEYMKSFNVPLLLVGGGGYTI 304

Query:   303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRI-PNGHIENLNSKSYLSTIKM 361
              NV+RCW  ET I L+ E+ +++P ++Y  YF P+  L I P   + N N+  ++    +
Sbjct:   305 RNVSRCWLYETAIALNQEVSDDLPLHDYFDYFIPDYKLHIKPLAALSNFNTPEFIDQTIV 364

Query:   362 QVLENLRSIQHAPSVQMQEVPP--DFYIPEFDE----DEQNPDERMDQHTQDKQIQRDDE 415
              +LENL+ + H PSVQMQ +    D  +  FDE    D QN D R+ Q  +D Q++   E
Sbjct:   365 ALLENLKQLPHVPSVQMQSISTSCDSIVKTFDEKLIRDHQNDDVRVTQFEEDVQVEDSAE 424

Query:   416 FYEG 419
             FY+G
Sbjct:   425 FYDG 428


>POMBASE|SPBC36.05c [details] [associations]
            symbol:clr6 "histone deacetylase (class I) Clr6"
            species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
            sister chromatid segregation" evidence=TAS] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IGI] [GO:0000790 "nuclear chromatin" evidence=IDA]
            [GO:0004407 "histone deacetylase activity" evidence=IMP]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=NAS]
            [GO:0016575 "histone deacetylation" evidence=IMP] [GO:0030261
            "chromosome condensation" evidence=IMP] [GO:0030466 "chromatin
            silencing at silent mating-type cassette" evidence=IGI] [GO:0030702
            "chromatin silencing at centromere" evidence=IMP] [GO:0032129
            "histone deacetylase activity (H3-K9 specific)" evidence=NAS]
            [GO:0032221 "Rpd3S complex" evidence=IDA] [GO:0033698 "Rpd3L
            complex" evidence=IDA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            [GO:0051570 "regulation of histone H3-K9 methylation" evidence=NAS]
            [GO:0070210 "Rpd3L-Expanded complex" evidence=IDA]
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
            PomBase:SPBC36.05c Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
            EMBL:CU329671 GO:GO:0045944 GO:GO:0006351 GenomeReviews:CU329671_GR
            GO:GO:0006338 GO:GO:0030466 GO:GO:0000122 GO:GO:0030702
            GO:GO:0000070 GO:GO:0051570 GO:GO:0030261 GO:GO:0033698
            GO:GO:0070210 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF064206
            PIR:T40300 RefSeq:NP_595333.1 ProteinModelPortal:O59702
            DIP:DIP-29339N IntAct:O59702 STRING:O59702
            EnsemblFungi:SPBC36.05c.1 GeneID:2540368 KEGG:spo:SPBC36.05c
            HOGENOM:HOG000225180 KO:K06067 OMA:RISCDEE OrthoDB:EOG4RV60J
            NextBio:20801496 GO:GO:0032221 GO:GO:0032129 Uniprot:O59702
        Length = 405

 Score = 1270 (452.1 bits), Expect = 1.9e-129, P = 1.9e-129
 Identities = 224/400 (56%), Positives = 300/400 (75%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
             K K+SYFYD DVG+ ++GP HPMKPHR+ M H+LV++Y+L++K+ +  P +A   ++ + 
Sbjct:     5 KKKVSYFYDEDVGNYHYGPQHPMKPHRVRMVHNLVVNYNLYEKLNVITPVRATRNDMTRC 64

Query:    64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
             H+ +Y+EFL R+TPDT   F+    K+N+G+DCPVF+ L+EFC I AGG+I AA+ LN+ 
Sbjct:    65 HTDEYIEFLWRVTPDTMEKFQPHQLKFNVGDDCPVFDGLYEFCSISAGGSIGAAQELNSG 124

Query:   124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
               +IAINWAGGLHHAKK EASGFCY+ND+ L  LELLKYH RVLYIDIDVHHGDGVEE F
Sbjct:   125 NAEIAINWAGGLHHAKKREASGFCYVNDIALAALELLKYHQRVLYIDIDVHHGDGVEEFF 184

Query:   184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
             Y TDRVMT SFHKFG+ +FPGTG +K+ G   GK YA+NVPL+DGIDD S+  +FK +IS
Sbjct:   185 YTTDRVMTCSFHKFGE-YFPGTGHIKDTGIGTGKNYAVNVPLRDGIDDESYESVFKPVIS 243

Query:   244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
              +++ + P A++LQCG DSLAGDRLGCFNLS+ GH+ CV FVK FNLP++  GGGGYT  
Sbjct:   244 HIMQWFRPEAVILQCGTDSLAGDRLGCFNLSMKGHSMCVDFVKSFNLPMICVGGGGYTVR 303

Query:   304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQV 363
             NVAR WT ETG+L   EL   +P N+Y++Y+ P+  L + + ++EN N++ YL +I  ++
Sbjct:   304 NVARVWTYETGLLAGEELDENLPYNDYLQYYGPDYKLNVLSNNMENHNTRQYLDSITSEI 363

Query:   364 LENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERMDQ 403
             +ENLR++  APSVQM + P DF     ++     +E MD+
Sbjct:   364 IENLRNLSFAPSVQMHKTPGDFTFENAEKQNIAKEEIMDE 403


>TAIR|locus:2162017 [details] [associations]
            symbol:HDA6 "histone deacetylase 6" species:3702
            "Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
            evidence=IEA;ISS;IMP] [GO:0005634 "nucleus" evidence=ISM;ISS;IDA]
            [GO:0016575 "histone deacetylation" evidence=IEA;ISS;IMP]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0016441
            "posttranscriptional gene silencing" evidence=IMP] [GO:0009941
            "chloroplast envelope" evidence=IDA] [GO:0009651 "response to salt
            stress" evidence=IMP] [GO:0009737 "response to abscisic acid
            stimulus" evidence=IMP] [GO:0009793 "embryo development ending in
            seed dormancy" evidence=IMP] [GO:0010431 "seed maturation"
            evidence=IMP] [GO:0010228 "vegetative to reproductive phase
            transition of meristem" evidence=IMP] [GO:0009640
            "photomorphogenesis" evidence=RCA] [GO:0010388 "cullin
            deneddylation" evidence=RCA] [GO:0016458 "gene silencing"
            evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009737 GO:GO:0005634
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005730 GO:GO:0006355
            GO:GO:0009651 GO:GO:0009941 GO:GO:0006351 GO:GO:0009793
            GO:GO:0010228 GO:GO:0010431 GO:GO:0070932 GO:GO:0070933
            EMBL:AB008265 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
            GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
            HSSP:Q9BY41 GO:GO:0004407 EMBL:AF195548 EMBL:AY142660 EMBL:AY072201
            EMBL:AY088314 IPI:IPI00533304 RefSeq:NP_201116.1 UniGene:At.8834
            ProteinModelPortal:Q9FML2 SMR:Q9FML2 IntAct:Q9FML2 STRING:Q9FML2
            PaxDb:Q9FML2 PRIDE:Q9FML2 EnsemblPlants:AT5G63110.1 GeneID:836431
            KEGG:ath:AT5G63110 TAIR:At5g63110 InParanoid:Q9FML2 OMA:WSAQSAV
            PhylomeDB:Q9FML2 ProtClustDB:CLSN2687541 Genevestigator:Q9FML2
            GO:GO:0016441 Uniprot:Q9FML2
        Length = 471

 Score = 1265 (450.4 bits), Expect = 6.6e-129, P = 6.6e-129
 Identities = 234/424 (55%), Positives = 305/424 (71%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
             K ++SYFY+  +G  Y+G  HPMKPHR+ M H L++ Y LH+++EI RP  A   ++ +F
Sbjct:    18 KRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHSLIIHYHLHRRLEISRPSLADASDIGRF 77

Query:    64 HSADYVEFLHRITPDTQH--LFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
             HS +YV+FL  ++P++       + L ++N+GEDCPVF+ LF+FC+  AGG+I AA +LN
Sbjct:    78 HSPEYVDFLASVSPESMGDPSAARNLRRFNVGEDCPVFDGLFDFCRASAGGSIGAAVKLN 137

Query:   122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
              Q  DIAINW GGLHHAKK EASGFCY+ND+VLGILELLK   RVLYIDIDVHHGDGVEE
Sbjct:   138 RQDADIAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKMFKRVLYIDIDVHHGDGVEE 197

Query:   182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
             AFY TDRVMTVSFHKFGD FFPGTG ++++G  +GK+YA+NVPL DG+DD SF  LF+ +
Sbjct:   198 AFYTTDRVMTVSFHKFGD-FFPGTGHIRDVGAEKGKYYALNVPLNDGMDDESFRSLFRPL 256

Query:   242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
             I KV+E Y P A+VLQCGADSL+GDRLGCFNLS+ GHA+C+RF++ +N+PL+V GGGGYT
Sbjct:   257 IQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSYNVPLMVLGGGGYT 316

Query:   302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKM 361
               NVARCW  ET + +  E  N++P NEY +YF P+ +L +    +ENLN+   +  I+ 
Sbjct:   317 IRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHVDPSPMENLNTPKDMERIRN 376

Query:   362 QVLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERMDQHTQDK-QIQRDDEFYEGD 420
              +LE L  + HAPSVQ Q  PP   +   DE E       D  T+ K +I      YE D
Sbjct:   377 TLLEQLSGLIHAPSVQFQHTPPVNRV--LDEPED------DMETRPKPRIWSGTATYESD 428

Query:   421 NDND 424
             +D+D
Sbjct:   429 SDDD 432


>UNIPROTKB|D4AEB0 [details] [associations]
            symbol:Hdac3 "Histone deacetylase" species:10116 "Rattus
            norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
            specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
            activity (H3-K18 specific)" evidence=IEA] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
            GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
            OMA:NFHYGPG IPI:IPI00421548 Ensembl:ENSRNOT00000060417
            ArrayExpress:D4AEB0 Uniprot:D4AEB0
        Length = 428

 Score = 1258 (447.9 bits), Expect = 3.6e-128, P = 3.6e-128
 Identities = 233/422 (55%), Positives = 300/422 (71%)

Query:     7 ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
             ++YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +  P +    +L   H  
Sbjct:     5 VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVKTPSRNKQEKLCPVHGV 64

Query:    67 DYVEFLHRITPDTQHLFRQELTKYNL--GEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
               + F  R  P +  L    ++   +  G + PVF  LFEFC  Y G ++  A +LNN++
Sbjct:    65 PLIWFSTRFGPKS--LLNGSVSGSGVEEGREFPVFPGLFEFCSRYTGASLQGATQLNNKI 122

Query:   125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
             CDIAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY
Sbjct:   123 CDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFY 182

Query:   185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
              TDRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +IS+
Sbjct:   183 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQ 242

Query:   245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
             VV+ Y P  IVLQCGADSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT  N
Sbjct:   243 VVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRN 302

Query:   305 VARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQV 363
             VARCWT ET +L++  +  E+P +EY +YFAP+ +L    +  IEN NS+ YL  I+  +
Sbjct:   303 VARCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTI 362

Query:   364 LENLRSIQHAPSVQMQEVPPDFYIPEFDE-DEQNPDERMDQHTQDKQIQRDDEFYEGDND 422
              ENL+ + HAPSVQ+ +VP D     +D  DE + +ER  +    +  +  +EFY+GD+D
Sbjct:   363 FENLKMLNHAPSVQIHDVPADLLT--YDRTDEADAEERGPEENYSRP-EAPNEFYDGDHD 419

Query:   423 ND 424
             ND
Sbjct:   420 ND 421


>UNIPROTKB|F1M4V8 [details] [associations]
            symbol:F1M4V8 "Histone deacetylase" species:10116 "Rattus
            norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
            specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
            activity (H3-K18 specific)" evidence=IEA] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
            GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
            IPI:IPI00950574 Ensembl:ENSRNOT00000036983 Uniprot:F1M4V8
        Length = 465

 Score = 1229 (437.7 bits), Expect = 4.3e-125, P = 4.3e-125
 Identities = 231/418 (55%), Positives = 302/418 (72%)

Query:     9 YFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADY 68
             Y+YDGD G+  +G  HP+KPH++ MTH+L LSY L++KMEIYRPHKA   E+ ++HS DY
Sbjct:     1 YYYDGDAGNYNYGQGHPVKPHQIRMTHNLPLSYGLYRKMEIYRPHKANAEEMTKYHSDDY 60

Query:    69 VEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIA 128
             ++FL  I PD+   + +++ ++N+G+DCPVF  L EFCQ+  GG++ +A +LN Q  DIA
Sbjct:    61 IKFLRFIRPDSMSEYIKQMQRFNVGQDCPVFNGLSEFCQLSTGGSVASAVKLNKQQTDIA 120

Query:   129 INWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDR 188
             +NWAG LHHAK  EASGFCY+ND+VL ILELLKY  RVL +DID HHGDG EEAFY  D 
Sbjct:   121 VNWAGDLHHAKNSEASGFCYVNDIVLAILELLKYLQRVLCMDIDTHHGDGTEEAFYTADW 180

Query:   189 VMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVET 248
             VMTVSFH F     P TGD+++IG  +GK+YAIN PL+D IDD S   +FK ++SKV+E 
Sbjct:   181 VMTVSFHNF-----PVTGDLRDIGAGKGKYYAINYPLRDCIDDESCEAIFKPVMSKVME- 234

Query:   249 YAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARC 308
               P A+VLQCG+DSL+GD LG FNL+I GH +CV FVK FNLP+L+  GGGYT  NVARC
Sbjct:   235 --PSAVVLQCGSDSLSGDWLGSFNLTIKGH-KCVGFVKSFNLPMLMLRGGGYTIHNVARC 291

Query:   309 WTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLR 368
             WT ET + LDTE+PNE+P N+Y +YF P+  L I   +  N N+  YL  IK ++ ENLR
Sbjct:   292 WTYETAVTLDTEIPNELPYNDYFEYFGPDFKLHISPSNTTNQNTNEYLE-IKQRLFENLR 350

Query:   369 SIQHAPSVQMQEVPPDFYIPEF--DEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 424
              + H P VQMQ +P D  IPE   DEDE++PD+R+   + DK I  ++EF + D + +
Sbjct:   351 MLPHVPEVQMQAIPEDA-IPEESGDEDEEDPDKRISICSSDKCIACEEEFSDSDEEGE 407


>UNIPROTKB|F1SV89 [details] [associations]
            symbol:LOC100521667 "Histone deacetylase" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
            of transcription, DNA-dependent" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
            GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
            EMBL:FP102820 Ensembl:ENSSSCT00000004008 OMA:TEIPNXM Uniprot:F1SV89
        Length = 392

 Score = 1170 (416.9 bits), Expect = 6.6e-121, Sum P(2) = 6.6e-121
 Identities = 210/338 (62%), Positives = 267/338 (78%)

Query:    91 NLGEDCPVFENLFEFCQIYAGGTIDAAR--RLNNQLCDIAINWAGGLHHAKKCEASGFCY 148
             N+GEDCPVF+ LFEFCQ+ AGG++  A   +LN Q  DIA+NWAGGLHHAKK EASGFCY
Sbjct:     3 NVGEDCPVFDGLFEFCQLSAGGSVGPASAVKLNKQQTDIAVNWAGGLHHAKKSEASGFCY 62

Query:   149 INDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDV 208
             +ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G+ +FPGTGD+
Sbjct:    63 VNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYGE-YFPGTGDL 121

Query:   209 KEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRL 268
             ++IG  +GK+YA+N PL+DGIDD S+  +FK ++SKV+E + P A+VLQCG+DSL+GDRL
Sbjct:   122 RDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRL 181

Query:   269 GCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPEN 328
             GCFNL+I GHA+CV FVK FNLP+L+ GGGGYT  NVARCWT ET + LDTE+PNE+P N
Sbjct:   182 GCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCWTYETAVALDTEIPNELPYN 241

Query:   329 EYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIP 388
             +Y +YF P+  L I   ++ N N+  YL  IK ++ ENLR + HAP VQMQ +P D  IP
Sbjct:   242 DYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRMLPHAPGVQMQAIPEDA-IP 300

Query:   389 EF--DEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 424
             E   DEDE++PD+R+   + DK+I  ++EF + D + +
Sbjct:   301 EESGDEDEEDPDKRISICSSDKRIACEEEFSDSDEEGE 338

 Score = 40 (19.1 bits), Expect = 6.6e-121, Sum P(2) = 6.6e-121
 Identities = 7/25 (28%), Positives = 15/25 (60%)

Query:   391 DEDEQNPDERMDQHTQDKQIQRDDE 415
             DE E++P+E+ +   ++K  +   E
Sbjct:   357 DEKEKDPEEKKEVTEEEKTKEEKQE 381


>CGD|CAL0004384 [details] [associations]
            symbol:HOS2 species:5476 "Candida albicans" [GO:0004407
            "histone deacetylase activity" evidence=ISS] [GO:0044182
            "filamentous growth of a population of unicellular organisms"
            evidence=IMP] [GO:1900429 "negative regulation of filamentous
            growth of a population of unicellular organisms" evidence=IMP]
            [GO:0036166 "phenotypic switching" evidence=IMP] [GO:0009405
            "pathogenesis" evidence=IMP] [GO:0034967 "Set3 complex"
            evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0070210
            "Rpd3L-Expanded complex" evidence=IEA] [GO:0030447 "filamentous
            growth" evidence=IMP] [GO:0030466 "chromatin silencing at silent
            mating-type cassette" evidence=IEA] [GO:0045835 "negative
            regulation of meiosis" evidence=IEA] [GO:0032874 "positive
            regulation of stress-activated MAPK cascade" evidence=IEA]
            [GO:0006348 "chromatin silencing at telomere" evidence=IEA]
            [GO:0016575 "histone deacetylation" evidence=IEA] [GO:0030702
            "chromatin silencing at centromere" evidence=IEA] [GO:0034739
            "histone deacetylase activity (H4-K16 specific)" evidence=IEA]
            [GO:0045129 "NAD-independent histone deacetylase activity"
            evidence=IEA] [GO:0017136 "NAD-dependent histone deacetylase
            activity" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
            PRINTS:PR01271 CGD:CAL0004384 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005634 GO:GO:0009405 GO:GO:0006355 GO:GO:0006351
            GO:GO:0070932 GO:GO:0070933 GO:GO:0044182 GO:GO:1900429
            GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0036166 EMBL:AACQ01000050
            GO:GO:0004407 KO:K11483 RefSeq:XP_717754.1
            ProteinModelPortal:Q5A839 STRING:Q5A839 GeneID:3640509
            KEGG:cal:CaO19.5377 Uniprot:Q5A839
        Length = 454

 Score = 1177 (419.4 bits), Expect = 1.4e-119, P = 1.4e-119
 Identities = 214/416 (51%), Positives = 296/416 (71%)

Query:     3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
             +K  +SY Y+ +V   ++G  HPMKP RL +T HLV+SY L++KM++Y P +A   EL +
Sbjct:    33 NKYNVSYHYNPEVSRFHYGALHPMKPFRLMLTDHLVISYKLYEKMDLYTPRRATKDELLE 92

Query:    63 FHSADYVEFLHRITPDT-QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
             FHS DY++FL  ITP+  + +    L ++N+G+DCP+F+ ++++  IYAG ++DA R+L 
Sbjct:    93 FHSEDYIDFLQSITPEKCKTISNDTLAQFNIGDDCPIFDGMYDYSAIYAGASLDATRKLI 152

Query:   122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
             + + DIAINW+GGLHHAKK E SGFCY+ND+VL I+ LL+ H RV+YIDID+HHGDGV+E
Sbjct:   153 SGMSDIAINWSGGLHHAKKFEPSGFCYVNDIVLSIINLLRVHPRVMYIDIDLHHGDGVQE 212

Query:   182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
             AFY TDRVMTVSFHK+   FFPGTG V E+G   GK YAINVPL+DGIDD S+ RLFK+I
Sbjct:   213 AFYNTDRVMTVSFHKYNGEFFPGTGSVDEVGIGSGKNYAINVPLRDGIDDESYIRLFKSI 272

Query:   242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
             +  ++  + P  IV QCGADSL  DRLGCFNL+I  H ECV+F+K F +P+LV GGGGYT
Sbjct:   273 MEPLITKFQPTCIVQQCGADSLGYDRLGCFNLNIRAHGECVKFIKSFGIPMLVVGGGGYT 332

Query:   302 KENVARCWTVETGILLDTELPNEIPEN-EYIKYFAPECSLRIP-NGHIENLNSKSYLSTI 359
               NV+R W  ET +L D  L ++IP       +F P+ SL    +G I+N NSK YL ++
Sbjct:   333 PRNVSRLWCYETSVLNDVNLDHKIPNYLPTYDWFGPDYSLHPQLDGRIDNKNSKKYLQSV 392

Query:   360 KMQVLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERMDQHTQ-DKQIQRDD 414
             +  ++E +R + HAPSVQM E+PPD  +    EDE    + +++  + D++I +D+
Sbjct:   393 QTTIMEQIRYLNHAPSVQMYEIPPD--LTGLTEDEDKAIQELNEDMERDEKIMKDE 446


>UNIPROTKB|Q5A839 [details] [associations]
            symbol:HOS2 "Histone deacetylase" species:237561 "Candida
            albicans SC5314" [GO:0004407 "histone deacetylase activity"
            evidence=ISS] [GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447
            "filamentous growth" evidence=IMP] [GO:0036166 "phenotypic
            switching" evidence=IMP] [GO:0044182 "filamentous growth of a
            population of unicellular organisms" evidence=IMP] [GO:1900429
            "negative regulation of filamentous growth of a population of
            unicellular organisms" evidence=IMP] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 CGD:CAL0004384 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0009405 GO:GO:0006355
            GO:GO:0006351 GO:GO:0070932 GO:GO:0070933 GO:GO:0044182
            GO:GO:1900429 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0036166
            EMBL:AACQ01000050 GO:GO:0004407 KO:K11483 RefSeq:XP_717754.1
            ProteinModelPortal:Q5A839 STRING:Q5A839 GeneID:3640509
            KEGG:cal:CaO19.5377 Uniprot:Q5A839
        Length = 454

 Score = 1177 (419.4 bits), Expect = 1.4e-119, P = 1.4e-119
 Identities = 214/416 (51%), Positives = 296/416 (71%)

Query:     3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
             +K  +SY Y+ +V   ++G  HPMKP RL +T HLV+SY L++KM++Y P +A   EL +
Sbjct:    33 NKYNVSYHYNPEVSRFHYGALHPMKPFRLMLTDHLVISYKLYEKMDLYTPRRATKDELLE 92

Query:    63 FHSADYVEFLHRITPDT-QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
             FHS DY++FL  ITP+  + +    L ++N+G+DCP+F+ ++++  IYAG ++DA R+L 
Sbjct:    93 FHSEDYIDFLQSITPEKCKTISNDTLAQFNIGDDCPIFDGMYDYSAIYAGASLDATRKLI 152

Query:   122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
             + + DIAINW+GGLHHAKK E SGFCY+ND+VL I+ LL+ H RV+YIDID+HHGDGV+E
Sbjct:   153 SGMSDIAINWSGGLHHAKKFEPSGFCYVNDIVLSIINLLRVHPRVMYIDIDLHHGDGVQE 212

Query:   182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
             AFY TDRVMTVSFHK+   FFPGTG V E+G   GK YAINVPL+DGIDD S+ RLFK+I
Sbjct:   213 AFYNTDRVMTVSFHKYNGEFFPGTGSVDEVGIGSGKNYAINVPLRDGIDDESYIRLFKSI 272

Query:   242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
             +  ++  + P  IV QCGADSL  DRLGCFNL+I  H ECV+F+K F +P+LV GGGGYT
Sbjct:   273 MEPLITKFQPTCIVQQCGADSLGYDRLGCFNLNIRAHGECVKFIKSFGIPMLVVGGGGYT 332

Query:   302 KENVARCWTVETGILLDTELPNEIPEN-EYIKYFAPECSLRIP-NGHIENLNSKSYLSTI 359
               NV+R W  ET +L D  L ++IP       +F P+ SL    +G I+N NSK YL ++
Sbjct:   333 PRNVSRLWCYETSVLNDVNLDHKIPNYLPTYDWFGPDYSLHPQLDGRIDNKNSKKYLQSV 392

Query:   360 KMQVLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERMDQHTQ-DKQIQRDD 414
             +  ++E +R + HAPSVQM E+PPD  +    EDE    + +++  + D++I +D+
Sbjct:   393 QTTIMEQIRYLNHAPSVQMYEIPPD--LTGLTEDEDKAIQELNEDMERDEKIMKDE 446


>POMBASE|SPAC3G9.07c [details] [associations]
            symbol:hos2 "histone deacetylase (class I) Hos2"
            species:4896 "Schizosaccharomyces pombe" [GO:0004407 "histone
            deacetylase activity" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
            "cytosol" evidence=IDA] [GO:0006338 "chromatin remodeling"
            evidence=IC] [GO:0006348 "chromatin silencing at telomere"
            evidence=IMP] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=IEP] [GO:0016575 "histone
            deacetylation" evidence=IDA] [GO:0030466 "chromatin silencing at
            silent mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
            silencing at centromere" evidence=IMP] [GO:0034739 "histone
            deacetylase activity (H4-K16 specific)" evidence=IDA] [GO:0034967
            "Set3 complex" evidence=IDA] [GO:0060303 "regulation of nucleosome
            density" evidence=IEP] [GO:0070210 "Rpd3L-Expanded complex"
            evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
            PomBase:SPAC3G9.07c Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
            EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0006357 GO:GO:0006351
            GO:GO:0006338 GO:GO:0030466 GO:GO:0030702 GO:GO:0006348
            GO:GO:0070210 GO:GO:0070932 eggNOG:COG0123 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            HOGENOM:HOG000225180 GO:GO:0034967 KO:K11483 OrthoDB:EOG4GJ2XR
            GO:GO:0060303 EMBL:AB008888 PIR:T11643 RefSeq:NP_594079.1
            ProteinModelPortal:O13298 STRING:O13298 EnsemblFungi:SPAC3G9.07c.1
            GeneID:2543643 KEGG:spo:SPAC3G9.07c OMA:ENIRIRC NextBio:20804649
            GO:GO:0034739 Uniprot:O13298
        Length = 434

 Score = 1158 (412.7 bits), Expect = 1.4e-117, P = 1.4e-117
 Identities = 211/403 (52%), Positives = 289/403 (71%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
             K +++Y  D  VG+ ++G  HPMKPHR+ +T+HLV+ Y LH KM ++ P  A   E+++F
Sbjct:    25 KKRVTYHLDEQVGNYHYGDKHPMKPHRITITNHLVMGYGLHNKMSVFSPRMATFGEMSEF 84

Query:    64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
             H  DY++FL R+TPD    F  +  ++N+G+DCPVF+  +EF Q  AG ++DA+R+L   
Sbjct:    85 HREDYLDFLKRVTPDNAEQFADKFQQFNIGDDCPVFDGTYEFSQRSAGASLDASRKLVQG 144

Query:   124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
               DIAINW+GGLHHAK+ EASGFCY+ND+VL IL +L++  RVLYIDID+HHGDGV++AF
Sbjct:   145 QTDIAINWSGGLHHAKRGEASGFCYVNDIVLAILNMLRFFPRVLYIDIDIHHGDGVQQAF 204

Query:   184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
             Y +DRV+TVSFHK+   FFP TG+  E G + GK++A+NVPL+DGI D  +T LFK+II 
Sbjct:   205 YESDRVLTVSFHKYNGDFFPATGNFDENGVKGGKYFALNVPLEDGIGDEQYTSLFKSIIE 264

Query:   244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
               + T+ P AIVLQCGADSL  DRLG FNLSI  H ECVRF + FN+P+LV GGGGYT  
Sbjct:   265 PTINTFQPSAIVLQCGADSLGYDRLGVFNLSIHAHGECVRFTRSFNIPMLVVGGGGYTLR 324

Query:   304 NVARCWTVETGILLDTELPNEIP-ENEYIKYFAPECSL--RIPNGHIENLNSKSYLSTIK 360
             NVAR W  ET I ++ ++P+E+P E  Y ++FAP+ +L  R+    IEN N+   L  ++
Sbjct:   325 NVARAWCYETSICVNEQIPSELPRETLYYEFFAPDYTLHPRLTT-KIENKNTPKALEDLR 383

Query:   361 MQVLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERMDQ 403
             ++ LE LR +  APSVQMQ++PPD      +EDE+  DE +D+
Sbjct:   384 IRALEQLRYLGGAPSVQMQQIPPDLTGHLEEEDERLNDEYLDK 426


>SGD|S000003162 [details] [associations]
            symbol:HOS2 "Histone deacetylase and subunit of Set3 and
            Rpd3L complexes" species:4932 "Saccharomyces cerevisiae"
            [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0046969 "NAD-dependent
            histone deacetylase activity (H3-K9 specific)" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0034967 "Set3 complex"
            evidence=IDA] [GO:0032874 "positive regulation of stress-activated
            MAPK cascade" evidence=IMP] [GO:0070210 "Rpd3L-Expanded complex"
            evidence=IDA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA;ISS;IMP]
            [GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] [GO:0016575 "histone deacetylation" evidence=IEA;IDA]
            [GO:0004407 "histone deacetylase activity" evidence=IEA]
            [GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
            specific)" evidence=IEA] [GO:0006325 "chromatin organization"
            evidence=ISS] [GO:0045129 "NAD-independent histone deacetylase
            activity" evidence=IDA] [GO:0017136 "NAD-dependent histone
            deacetylase activity" evidence=IDA] [GO:0045835 "negative
            regulation of meiosis" evidence=IMP] [GO:0031078 "histone
            deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032041
            "NAD-dependent histone deacetylase activity (H3-K14 specific)"
            evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
            specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
            (H4-K16 specific)" evidence=IEA] [GO:0016568 "chromatin
            modification" evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913
            PRINTS:PR01271 SGD:S000003162 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0006355 EMBL:X91837 EMBL:BK006941 GO:GO:0006351 GO:GO:0070210
            GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            HOGENOM:HOG000225180 GO:GO:0032874 GO:GO:0034967 GO:GO:0045835
            GeneTree:ENSGT00390000003411 OMA:PRVMYID EMBL:Z72716 PIR:S64211
            RefSeq:NP_011321.1 ProteinModelPortal:P53096 SMR:P53096
            DIP:DIP-6828N IntAct:P53096 MINT:MINT-629670 STRING:P53096
            PaxDb:P53096 EnsemblFungi:YGL194C GeneID:852681 KEGG:sce:YGL194C
            CYGD:YGL194c KO:K11483 OrthoDB:EOG4GJ2XR NextBio:971996
            Genevestigator:P53096 GermOnline:YGL194C GO:GO:0017136
            GO:GO:0045129 Uniprot:P53096
        Length = 452

 Score = 1150 (409.9 bits), Expect = 1.0e-116, P = 1.0e-116
 Identities = 221/420 (52%), Positives = 290/420 (69%)

Query:     6 KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
             ++SY ++  V   ++G  HPMKP RL +T HLV SY LHK M++Y    A   EL QFHS
Sbjct:    27 RVSYHFNSKVSHYHYGVKHPMKPFRLMLTDHLVSSYGLHKIMDLYETRSATRDELLQFHS 86

Query:    66 ADYVEFLHRITPDTQH-LFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
              DYV FL +++P+  + L R  L  +N+G+DCP+F+NL+++  +Y G ++DA R+L N  
Sbjct:    87 EDYVNFLSKVSPENANKLPRGTLENFNIGDDCPIFQNLYDYTTLYTGASLDATRKLINNQ 146

Query:   125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
              DIAINW+GGLHHAKK   SGFCY+ND+VL IL LL+YH R+LYIDID+HHGDGV+EAFY
Sbjct:   147 SDIAINWSGGLHHAKKNSPSGFCYVNDIVLSILNLLRYHPRILYIDIDLHHGDGVQEAFY 206

Query:   185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
              TDRV T+SFHK+   FFPGTGD+ EIG  +GK +A+NVPL+DGIDD S+  LFK+I+  
Sbjct:   207 TTDRVFTLSFHKYNGEFFPGTGDLTEIGCDKGKHFALNVPLEDGIDDDSYINLFKSIVDP 266

Query:   245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
             ++ T+ P  IV QCGADSL  DRLGCFNL+I  H ECV+FVK F LP+LV GGGGYT  N
Sbjct:   267 LIMTFKPTLIVQQCGADSLGHDRLGCFNLNIKAHGECVKFVKSFGLPMLVVGGGGYTPRN 326

Query:   305 VARCWTVETGILLDTELPNEIPEN-EYIKYFAPECSLR-IPNGHIENLNSKSYLSTIKMQ 362
             V+R WT ETGIL D  LP +IPE+  +   F P+ SL  + +   EN NSK  L  I+++
Sbjct:   327 VSRLWTYETGILNDVLLPEDIPEDIPFRDSFGPDYSLYPMLDDLYENKNSKKLLEDIRIR 386

Query:   363 VLENLRSIQHAPSVQMQ-EVPPDFYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDN 421
              LEN+R +Q APSV+M  E  P   I    E+E    + M++ T+     R +E  E +N
Sbjct:   387 CLENIRYLQGAPSVRMDAECIPTQDISALTEEEDKIIQEMNEETEADSSNRLEEM-EKEN 445


>ASPGD|ASPL0000013866 [details] [associations]
            symbol:hosA species:162425 "Emericella nidulans"
            [GO:0016575 "histone deacetylation" evidence=IEA;ISA] [GO:0005829
            "cytosol" evidence=IEA] [GO:0034967 "Set3 complex" evidence=IEA]
            [GO:0070210 "Rpd3L-Expanded complex" evidence=IEA] [GO:0034739
            "histone deacetylase activity (H4-K16 specific)" evidence=IEA]
            [GO:0045129 "NAD-independent histone deacetylase activity"
            evidence=IEA] [GO:0017136 "NAD-dependent histone deacetylase
            activity" evidence=IEA] [GO:0030466 "chromatin silencing at silent
            mating-type cassette" evidence=IEA] [GO:0045835 "negative
            regulation of meiosis" evidence=IEA] [GO:0032874 "positive
            regulation of stress-activated MAPK cascade" evidence=IEA]
            [GO:0006348 "chromatin silencing at telomere" evidence=IEA]
            [GO:0030702 "chromatin silencing at centromere" evidence=IEA]
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
            EMBL:BN001302 EMBL:AACD01000061 GO:GO:0070932 GO:GO:0070933
            eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 OMA:PRVMYID
            KO:K11483 OrthoDB:EOG4GJ2XR RefSeq:XP_661410.1
            ProteinModelPortal:Q5B6M4 STRING:Q5B6M4
            EnsemblFungi:CADANIAT00004906 GeneID:2873231 KEGG:ani:AN3806.2
            Uniprot:Q5B6M4
        Length = 482

 Score = 1062 (378.9 bits), Expect = 2.1e-107, P = 2.1e-107
 Identities = 206/413 (49%), Positives = 278/413 (67%)

Query:     6 KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
             ++S+  +  V   +FG +HPMKP RL +T  LVL+Y +H  M++Y    A   EL+ FH+
Sbjct:    38 RVSWHANPAVELHHFGQSHPMKPWRLTLTKQLVLAYGMHHAMDLYHCRAATVEELSDFHT 97

Query:    66 ADYVEFLHRITP----DTQHL--FRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARR 119
             +DY++FL  + P    D Q    F + + ++N G+DCP+F+ LF++C +YAG ++DAAR+
Sbjct:    98 SDYLDFLQTVVPGDMNDAQASKDFSENIVRFNFGDDCPIFDGLFQYCSLYAGASLDAARK 157

Query:   120 LNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGV 179
             L N   DIAINW+GGLHHAKK EASGFCY+ND+VL IL+LL+ H RV+YIDIDVHHGDGV
Sbjct:   158 LCNNQADIAINWSGGLHHAKKAEASGFCYVNDIVLAILQLLRIHPRVMYIDIDVHHGDGV 217

Query:   180 EEAFYFTDRVMTVSFHKFG-DLFFPGTGDVKEIGERE----GKFYAINVPLKDGIDDTSF 234
             E+AF+ TDRV+TVSFHK+  + FFPGTG +   G       G  +A+NVPL DGIDD S+
Sbjct:   218 EQAFWSTDRVLTVSFHKYDKENFFPGTGPLDSTGPTHPLNPGAHHAVNVPLHDGIDDESY 277

Query:   235 TRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLV 294
              +LFK ++   V  + P AIVLQCGADSL  DRLGCFNL++  H  CV + K F LP+LV
Sbjct:   278 VQLFKDVVGACVSKFRPAAIVLQCGADSLGCDRLGCFNLNVAAHGACVAYTKTFGLPMLV 337

Query:   295 TGGGGYTKENVARCWTVETGILLDTE--LPNEIPEN-EYIKYFAPECSLRIPNGH---IE 348
              GGGGYT  NV+R W  ET IL+D +  +   IP N  +  +F P+ SL  P      +E
Sbjct:   338 VGGGGYTPRNVSRAWAHETSILIDAQDKINPVIPSNVAFRNHFGPDFSLFPPLSEMRKLE 397

Query:   349 NLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERM 401
             N NS++YL+TI   + E LR +Q APSVQM  +PPD  +   +E E+  +E +
Sbjct:   398 NKNSRAYLATIVQTITEQLRYLQAAPSVQMSVIPPDL-LGLREETEKEIEEEI 449


>WB|WBGene00001835 [details] [associations]
            symbol:hda-2 species:6239 "Caenorhabditis elegans"
            [GO:0016575 "histone deacetylation" evidence=IEA;ISS] [GO:0004407
            "histone deacetylase activity" evidence=IEA;ISS] [GO:0006974
            "response to DNA damage stimulus" evidence=IMP] [GO:0002119
            "nematode larval development" evidence=IMP] [GO:0000003
            "reproduction" evidence=IMP] [GO:0009792 "embryo development ending
            in birth or egg hatching" evidence=IMP] [GO:0040007 "growth"
            evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040017
            "positive regulation of locomotion" evidence=IMP] [GO:0006915
            "apoptotic process" evidence=IMP] [GO:0042262 "DNA protection"
            evidence=IMP] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=ISS] [GO:0016568
            "chromatin modification" evidence=ISS] [GO:0000118 "histone
            deacetylase complex" evidence=ISS] [GO:0003714 "transcription
            corepressor activity" evidence=ISS] [GO:0045138 "tail tip
            morphogenesis" evidence=IMP] InterPro:IPR003084 PIRSF:PIRSF037913
            PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0009792
            GO:GO:0040007 GO:GO:0003714 GO:GO:0006915 GO:GO:0002119
            GO:GO:0042262 GO:GO:0040011 GO:GO:0040017 GO:GO:0000003
            GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 EMBL:Z46676 GO:GO:0045138
            GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
            GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067 GO:GO:0004407
            GeneTree:ENSGT00530000062889 PIR:T19067 RefSeq:NP_495678.1
            ProteinModelPortal:Q09440 SMR:Q09440 IntAct:Q09440 MINT:MINT-226304
            STRING:Q09440 PaxDb:Q09440 EnsemblMetazoa:C08B11.2 GeneID:174285
            KEGG:cel:CELE_C08B11.2 UCSC:C08B11.2 CTD:174285 WormBase:C08B11.2
            InParanoid:Q09440 OMA:PRVMYID NextBio:883367 Uniprot:Q09440
        Length = 507

 Score = 1060 (378.2 bits), Expect = 3.5e-107, P = 3.5e-107
 Identities = 205/407 (50%), Positives = 281/407 (69%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
             K  ++Y+Y  DVG  ++G  HPMKP RL + + LV+SY++ K M +    K    +++ F
Sbjct:    28 KRNVAYYYHKDVGHFHYGQLHPMKPQRLVVCNDLVVSYEMPKYMTVVESPKLDAADISVF 87

Query:    64 HSADYVEFLHRITPDTQHLFRQE-LTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
             H+ DYV FL  +TP        + L ++N+GEDCP+F  L+++C +YAGG+++ ARRLN+
Sbjct:    88 HTEDYVNFLQTVTPKLGLTMPDDVLRQFNIGEDCPIFAGLWDYCTLYAGGSVEGARRLNH 147

Query:   123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             ++ DI INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDID+HHGDGV+EA
Sbjct:   148 KMNDIVINWPGGLHHAKKSEASGFCYVNDIVLGILELLKYHKRVLYIDIDIHHGDGVQEA 207

Query:   183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
             F  +DRVMTVSFH+FG  +FPG+G + + G   GK++AINVPL   I D  + +LF+++I
Sbjct:   208 FNNSDRVMTVSFHRFGQ-YFPGSGSIMDKGVGPGKYFAINVPLMAAIRDEPYLKLFESVI 266

Query:   243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
             S V E + P AIVLQCG+DSL  DRLG F LS + HA  V++VK    PL+V GGGGYT 
Sbjct:   267 SGVEENFNPEAIVLQCGSDSLCEDRLGQFALSFNAHARAVKYVKSLGKPLMVLGGGGYTL 326

Query:   303 ENVARCWTVETGILLDTELPNEIPENE-YIKYFAPECSLRIPN--GHIENLNSKSYLSTI 359
              NVARCW +ETG++L   + +EIP    Y  YF P   LR PN    + + NS +YL++I
Sbjct:   327 RNVARCWALETGVILGLRMDDEIPGTSLYSHYFTPRL-LR-PNLVPKMNDANSAAYLASI 384

Query:   360 KMQVLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERMDQHTQ 406
             + + L  LR I+ APSVQMQ +     + E ++ E+N  ER+ + ++
Sbjct:   385 EKETLACLRMIRGAPSVQMQNIV-GIRLDEIEQIEEN--ERLQKSSK 428


>TAIR|locus:2157111 [details] [associations]
            symbol:HDA7 "histone deacetylase7" species:3702
            "Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;ISS]
            [GO:0016575 "histone deacetylation" evidence=IEA;ISS]
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005634 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
            GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
            GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 KO:K06067
            HSSP:Q9BY41 EMBL:AF510166 EMBL:AB023031 EMBL:DQ447001 EMBL:DQ653319
            IPI:IPI00544887 RefSeq:NP_198410.1 UniGene:At.30589
            ProteinModelPortal:Q9FH09 SMR:Q9FH09 PRIDE:Q9FH09
            EnsemblPlants:AT5G35600.1 GeneID:833525 KEGG:ath:AT5G35600
            TAIR:At5g35600 InParanoid:Q9FH09 OMA:WCYETAI PhylomeDB:Q9FH09
            Genevestigator:Q9FH09 Uniprot:Q9FH09
        Length = 409

 Score = 1047 (373.6 bits), Expect = 8.3e-106, P = 8.3e-106
 Identities = 205/406 (50%), Positives = 274/406 (67%)

Query:     4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
             K ++SYFY+  +G  Y+G N P KP R+ +TH+L+LSY+LH+ MEI  P  A   +  +F
Sbjct:     9 KRRVSYFYEPMIGDYYYGVNQPTKPQRIRVTHNLILSYNLHRHMEINHPDLADASDFEKF 68

Query:    64 HSADYVEFLHRITPDT---QH-LFRQELTKYNLGEDC--PVFENLFEFCQIYAGGTIDAA 117
             HS +Y+ FL  +TP+T    H    + L ++N+  D   PVF NLF++C+ YAGG+I AA
Sbjct:    69 HSLEYINFLKSVTPETVTDPHPSVSENLKRFNVDVDWDGPVFHNLFDYCRAYAGGSISAA 128

Query:   118 RRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGD 177
              +LN Q  DIAINWAGG+HH KK +ASGF Y+ND+VL ILELLK   RVLYI+I   HGD
Sbjct:   129 AKLNRQEADIAINWAGGMHHVKKDKASGFGYVNDVVLAILELLKSFKRVLYIEIGFPHGD 188

Query:   178 GVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRL 237
              VEEAF  TDRVMTVSFHK GD     TGD+ + GE +G++Y++N PLKDG+DD S   L
Sbjct:   189 EVEEAFKDTDRVMTVSFHKVGD-----TGDISDYGEGKGQYYSLNAPLKDGLDDFSLRGL 243

Query:   238 FKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG 297
             F  +I + +E Y P  IVLQCGADSLAGD  G FNLSI GH +C+++V+ FN+PL++ GG
Sbjct:   244 FIPVIHRAMEIYEPEVIVLQCGADSLAGDPFGTFNLSIKGHGDCLQYVRSFNVPLMILGG 303

Query:   298 GGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLS 357
             GGYT  NVARCW  ET I +  +L N++P N+Y+KYF P+  L I   + +NLN++  + 
Sbjct:   304 GGYTLPNVARCWCYETAIAVGEQLDNDLPGNDYMKYFRPDYKLHILPTNRQNLNTRLDII 363

Query:   358 TIKMQVLENLRSIQHAPSVQMQEVPPDFYIPEFDE-D-EQNPDERM 401
             T++  +L  L  + HAPSV  Q+ P      E  E D E+  D R+
Sbjct:   364 TMRETLLAQLSLVMHAPSVPFQDTPSSSQATEAAEVDMEKRNDPRI 409


>UNIPROTKB|E7ESJ6 [details] [associations]
            symbol:HDAC3 "Histone deacetylase 3" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 EMBL:AC008781 GO:GO:0004407 HGNC:HGNC:4854
            ChiTaRS:HDAC3 IPI:IPI00976829 ProteinModelPortal:E7ESJ6 SMR:E7ESJ6
            Ensembl:ENST00000523088 UCSC:uc010jgd.1 ArrayExpress:E7ESJ6
            Bgee:E7ESJ6 Uniprot:E7ESJ6
        Length = 219

 Score = 724 (259.9 bits), Expect = 4.4e-86, Sum P(2) = 4.4e-86
 Identities = 127/173 (73%), Positives = 149/173 (86%)

Query:   124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
             +CDIAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAF
Sbjct:    47 ICDIAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAF 106

Query:   184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
             Y TDRVMTVSFHK+G+ FFPGTGD+ E+G   G++Y +NVPL+DGIDD S+  LF+ +I+
Sbjct:   107 YLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVIN 166

Query:   244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTG 296
             +VV+ Y P  IVLQCGADSL  DRLGCFNLSI GH ECV +VK FN+PLLV G
Sbjct:   167 QVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLG 219

 Score = 156 (60.0 bits), Expect = 4.4e-86, Sum P(2) = 4.4e-86
 Identities = 27/43 (62%), Positives = 34/43 (79%)

Query:     7 ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEI 49
             ++YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM I
Sbjct:     5 VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMII 47


>ZFIN|ZDB-GENE-040426-2772 [details] [associations]
            symbol:hdac8 "histone deacetylase 8" species:7955
            "Danio rerio" [GO:0016575 "histone deacetylation" evidence=IEA]
            [GO:0004407 "histone deacetylase activity" evidence=IEA]
            [GO:0005976 "polysaccharide metabolic process" evidence=IEA]
            [GO:0003824 "catalytic activity" evidence=IEA] [GO:0004553
            "hydrolase activity, hydrolyzing O-glycosyl compounds"
            evidence=IEA] [GO:0005977 "glycogen metabolic process"
            evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0032041 "NAD-dependent
            histone deacetylase activity (H3-K14 specific)" evidence=IEA]
            [GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
            specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
            (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
            deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0031078
            "histone deacetylase activity (H3-K14 specific)" evidence=IEA]
            [GO:0034739 "histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0046872 "metal ion
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR003084 InterPro:IPR008734
            InterPro:IPR008928 InterPro:IPR011613 InterPro:IPR012341
            Pfam:PF00723 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            ZFIN:ZDB-GENE-040426-2772 GO:GO:0004553 GO:GO:0005977
            SUPFAM:SSF48208 Gene3D:1.50.10.10 Gene3D:3.40.800.20
            InterPro:IPR023801 PRINTS:PR01270 GO:GO:0004407 PANTHER:PTHR10749
            GeneTree:ENSGT00520000055553 EMBL:CR318655 EMBL:CU633476
            IPI:IPI00996481 Ensembl:ENSDART00000083190 ArrayExpress:E7F4R5
            Bgee:E7F4R5 Uniprot:E7F4R5
        Length = 1376

 Score = 818 (293.0 bits), Expect = 1.2e-80, P = 1.2e-80
 Identities = 155/354 (43%), Positives = 227/354 (64%)

Query:    19 YFGPNHPMKPHRLC--MTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRIT 76
             + G +   +P  L   M H L+ +Y L K M + +PH A   E+A FH+  Y++ LH+I+
Sbjct:  1023 FSGQSFDAEPVELAASMVHSLIEAYGLLKYMRVVKPHVASIEEMAVFHTDSYLQHLHKIS 1082

Query:    77 PDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLH 136
              D  +   Q    + LG DCPV E +F++     G T+ AA+ L +  CD+AINWAGG H
Sbjct:  1083 QDGDNDDPQS-ADFGLGYDCPVVEGIFDYAAAVGGATLTAAQNLLDGKCDVAINWAGGWH 1141

Query:   137 HAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHK 196
             HAKK EASGFCY+ND VLGIL+L + + RVLY+D+D+HHGDGVE+AF FT +VMTVS HK
Sbjct:  1142 HAKKDEASGFCYVNDAVLGILKLREKYDRVLYVDVDLHHGDGVEDAFSFTSKVMTVSLHK 1201

Query:   197 FGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVL 256
             F   FFPGTGDV + G  +G++YA+NVP +DG+ D  + + F +++ +V   + P A+V+
Sbjct:  1202 FSPGFFPGTGDVTDTGLGKGRWYAVNVPFEDGVRDDRYCQTFTSVMQEVKALFNPEAVVM 1261

Query:   257 QCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGIL 316
             Q GAD++AGD +  FN++  G A+C+ ++  + LP L+ GGGGY   N ARCWT  TG +
Sbjct:  1262 QLGADTMAGDPMCSFNMTSVGVAKCLTYILGWELPTLLLGGGGYNLANTARCWTYLTGTV 1321

Query:   317 LDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSI 370
             L   L +EIP++E+   + P+ SL I      + N   +L  +   +  NL+++
Sbjct:  1322 LGQTLSSEIPDHEFFTEYGPDYSLEISPSCRPDRNESQHLERVISTIKGNLKNV 1375


>UNIPROTKB|Q9BY41 [details] [associations]
            symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
            sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0032041
            "NAD-dependent histone deacetylase activity (H3-K14 specific)"
            evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
            activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
            histone deacetylase activity (H4-K16 specific)" evidence=IEA]
            [GO:0097372 "NAD-dependent histone deacetylase activity (H3-K18
            specific)" evidence=IEA] [GO:0004407 "histone deacetylase activity"
            evidence=TAS] [GO:0008134 "transcription factor binding"
            evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
            [GO:0005737 "cytoplasm" evidence=TAS] [GO:0000118 "histone
            deacetylase complex" evidence=TAS] [GO:0005634 "nucleus"
            evidence=TAS] [GO:0071922 "regulation of cohesin localization to
            chromatin" evidence=IMP] [GO:0007062 "sister chromatid cohesion"
            evidence=IMP] [GO:0000228 "nuclear chromosome" evidence=TAS]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=TAS] [GO:0006333 "chromatin
            assembly or disassembly" evidence=TAS] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005737 Reactome:REACT_111102 Reactome:REACT_115566
            Reactome:REACT_21300 GO:GO:0046872 GO:GO:0006351 GO:GO:0000122
            GO:GO:0006333 GO:GO:0008134
            Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0000228
            GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 GO:GO:0008278
            eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180
            BRENDA:3.5.1.98 GO:GO:0004407 HOVERGEN:HBG057112 DrugBank:DB02546
            CTD:55869 KO:K11405 EMBL:AF230097 EMBL:AF245664 EMBL:AJ277724
            EMBL:AK296641 EMBL:AK300895 EMBL:AA376331 EMBL:AI159768 EMBL:T99283
            EMBL:AF212246 EMBL:AL133500 EMBL:BX295542 EMBL:BC050433
            IPI:IPI00245706 IPI:IPI00515065 IPI:IPI00645124 IPI:IPI00647323
            IPI:IPI00747259 RefSeq:NP_001159890.1 RefSeq:NP_001159891.1
            RefSeq:NP_060956.1 UniGene:Hs.310536 PDB:1T64 PDB:1T67 PDB:1T69
            PDB:1VKG PDB:1W22 PDB:2V5W PDB:2V5X PDB:3EW8 PDB:3EWF PDB:3EZP
            PDB:3EZT PDB:3F06 PDB:3F07 PDB:3F0R PDB:3MZ3 PDB:3MZ4 PDB:3MZ6
            PDB:3MZ7 PDB:3RQD PDB:3SFF PDB:3SFH PDBsum:1T64 PDBsum:1T67
            PDBsum:1T69 PDBsum:1VKG PDBsum:1W22 PDBsum:2V5W PDBsum:2V5X
            PDBsum:3EW8 PDBsum:3EWF PDBsum:3EZP PDBsum:3EZT PDBsum:3F06
            PDBsum:3F07 PDBsum:3F0R PDBsum:3MZ3 PDBsum:3MZ4 PDBsum:3MZ6
            PDBsum:3MZ7 PDBsum:3RQD PDBsum:3SFF PDBsum:3SFH
            ProteinModelPortal:Q9BY41 SMR:Q9BY41 MINT:MINT-5207407
            STRING:Q9BY41 PhosphoSite:Q9BY41 DMDM:29839394 PaxDb:Q9BY41
            PRIDE:Q9BY41 DNASU:55869 Ensembl:ENST00000373573
            Ensembl:ENST00000373589 Ensembl:ENST00000439122 GeneID:55869
            KEGG:hsa:55869 UCSC:uc004eau.3 GeneCards:GC0XM071549
            HGNC:HGNC:13315 HPA:HPA048560 MIM:300269 neXtProt:NX_Q9BY41
            Orphanet:199 PharmGKB:PA37766 InParanoid:Q9BY41 OMA:IDLDLHH
            OrthoDB:EOG405S1D PhylomeDB:Q9BY41 SABIO-RK:Q9BY41 BindingDB:Q9BY41
            ChEMBL:CHEMBL3192 ChiTaRS:HDAC8 EvolutionaryTrace:Q9BY41
            GenomeRNAi:55869 NextBio:61182 ArrayExpress:Q9BY41 Bgee:Q9BY41
            CleanEx:HS_HDAC8 Genevestigator:Q9BY41 GermOnline:ENSG00000147099
            Uniprot:Q9BY41
        Length = 377

 Score = 804 (288.1 bits), Expect = 4.7e-80, P = 4.7e-80
 Identities = 148/345 (42%), Positives = 223/345 (64%)

Query:    28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITP--DTQHLFRQ 85
             P R  M H L+ +Y LHK+M I +P  A   E+A FH+  Y++ L +++   D  H    
Sbjct:    35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDH---P 91

Query:    86 ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
             +  +Y LG DCP  E +F++     G TI AA+ L + +C +AINW+GG HHAKK EASG
Sbjct:    92 DSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASG 151

Query:   146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
             FCY+ND VLGIL L +   R+LY+D+D+HHGDGVE+AF FT +VMTVS HKF   FFPGT
Sbjct:   152 FCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGT 211

Query:   206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
             GDV ++G  +G++Y++NVP++DGI D  + ++ ++++ +V + + P A+VLQ GAD++AG
Sbjct:   212 GDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAG 271

Query:   266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI 325
             D +  FN++  G  +C++++ ++ L  L+ GGGGY   N ARCWT  TG++L   L +EI
Sbjct:   272 DPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEI 331

Query:   326 PENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSI 370
             P++E+   + P+  L I      + N    +  I   +  NL+ +
Sbjct:   332 PDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHV 376


>MGI|MGI:1917565 [details] [associations]
            symbol:Hdac8 "histone deacetylase 8" species:10090 "Mus
            musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
            [GO:0004407 "histone deacetylase activity" evidence=TAS]
            [GO:0005634 "nucleus" evidence=TAS] [GO:0005737 "cytoplasm"
            evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007062 "sister chromatid
            cohesion" evidence=ISO] [GO:0008134 "transcription factor binding"
            evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
            [GO:0016575 "histone deacetylation" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0031078 "histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0032041
            "NAD-dependent histone deacetylase activity (H3-K14 specific)"
            evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
            specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
            (H4-K16 specific)" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
            activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
            histone deacetylase activity (H4-K16 specific)" evidence=IEA]
            [GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
            "histone H4 deacetylation" evidence=IEA] [GO:0071922 "regulation of
            cohesin localization to chromatin" evidence=ISO] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 MGI:MGI:1917565
            INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355 GO:GO:0046872
            GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
            GO:GO:0000118 GO:GO:0008278 eggNOG:COG0123 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            HOGENOM:HOG000225180 GO:GO:0004407 GeneTree:ENSGT00530000062889
            HOVERGEN:HBG057112 CTD:55869 KO:K11405 OrthoDB:EOG405S1D
            EMBL:AK011332 EMBL:AK131998 EMBL:BC061257 EMBL:AK034511
            EMBL:AK041965 EMBL:AY066003 IPI:IPI00132657 IPI:IPI00264257
            RefSeq:NP_081658.1 UniGene:Mm.328128 ProteinModelPortal:Q8VH37
            SMR:Q8VH37 STRING:Q8VH37 PhosphoSite:Q8VH37 PRIDE:Q8VH37
            Ensembl:ENSMUST00000087916 GeneID:70315 KEGG:mmu:70315
            UCSC:uc009tyq.1 InParanoid:Q8VH37 BindingDB:Q8VH37
            ChEMBL:CHEMBL2347 NextBio:331374 Bgee:Q8VH37 CleanEx:MM_HDAC8
            Genevestigator:Q8VH37 Uniprot:Q8VH37
        Length = 377

 Score = 802 (287.4 bits), Expect = 7.6e-80, P = 7.6e-80
 Identities = 149/345 (43%), Positives = 222/345 (64%)

Query:    28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITP--DTQHLFRQ 85
             P R  M H L+ +Y LHK+M I +P  A   E+A FH+  Y++ L +++   D  H    
Sbjct:    35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDEDH---P 91

Query:    86 ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
             +  +Y LG DCP  E +F++     GGTI AA+ L +  C +AINW+GG HHAKK EASG
Sbjct:    92 DSIEYGLGYDCPATEGIFDYAAAIGGGTITAAQCLIDGKCKVAINWSGGWHHAKKDEASG 151

Query:   146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
             FCY+ND VLGIL L +   R+LY+D+D+HHGDGVE+AF FT +VMTVS HKF   FFPGT
Sbjct:   152 FCYLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGT 211

Query:   206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
             GD+ ++G  +G++Y++NVP++DGI D  +  + ++++ +V + + P A+VLQ GAD++AG
Sbjct:   212 GDMSDVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYQAFNPKAVVLQLGADTIAG 271

Query:   266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI 325
             D +  FN++  G  +C+++V ++ L  L+ GGGGY   N ARCWT  TG++L   L +EI
Sbjct:   272 DPMCSFNMTPVGIGKCLKYVLQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEI 331

Query:   326 PENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSI 370
             P++E+   + P+  L I      + N    +  I   +  NL+ +
Sbjct:   332 PDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHV 376


>RGD|1562895 [details] [associations]
            symbol:Hdac8 "histone deacetylase 8" species:10116 "Rattus
            norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0007062 "sister
            chromatid cohesion" evidence=ISO;ISS] [GO:0032041 "NAD-dependent
            histone deacetylase activity (H3-K14 specific)" evidence=IEA]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0071922 "regulation
            of cohesin localization to chromatin" evidence=ISO;ISS] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
            Pfam:PF00850 RGD:1562895 INTERPRO:IPR000286 GO:GO:0005634
            GO:GO:0005737 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
            GO:GO:0070932 GO:GO:0070933 GO:GO:0008278 eggNOG:COG0123
            GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 HOGENOM:HOG000225180 GeneTree:ENSGT00530000062889
            HOVERGEN:HBG057112 CTD:55869 KO:K11405 OrthoDB:EOG405S1D
            EMBL:BC162023 IPI:IPI00198758 RefSeq:NP_001119845.2
            RefSeq:XP_003752118.1 UniGene:Rn.208476 ProteinModelPortal:B1WC68
            SMR:B1WC68 Ensembl:ENSRNOT00000004224 GeneID:100911968
            GeneID:363481 KEGG:rno:100911968 KEGG:rno:363481 UCSC:RGD:1562895
            NextBio:683449 Genevestigator:B1WC68 Uniprot:B1WC68
        Length = 377

 Score = 802 (287.4 bits), Expect = 7.6e-80, P = 7.6e-80
 Identities = 149/345 (43%), Positives = 222/345 (64%)

Query:    28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITP--DTQHLFRQ 85
             P R  M H L+ +Y LHK+M I +P  A   E+A FH+  Y++ L +++   D  H    
Sbjct:    35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDEDH---P 91

Query:    86 ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
             +  +Y LG DCP  E +F++     GGTI AA+ L +  C +AINW+GG HHAKK EASG
Sbjct:    92 DSIEYGLGYDCPATEGIFDYAAAIGGGTITAAQCLIDGKCKVAINWSGGWHHAKKDEASG 151

Query:   146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
             FCY+ND VLGIL L +   R+LY+D+D+HHGDGVE+AF FT +VMTVS HKF   FFPGT
Sbjct:   152 FCYLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGT 211

Query:   206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
             GD+ ++G  +G++Y++NVP++DGI D  +  + ++++ +V + + P A+VLQ GAD++AG
Sbjct:   212 GDMSDVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYQAFNPKAVVLQLGADTIAG 271

Query:   266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI 325
             D +  FN++  G  +C+++V ++ L  L+ GGGGY   N ARCWT  TG++L   L +EI
Sbjct:   272 DPMCSFNMTPVGIGKCLKYVLQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEI 331

Query:   326 PENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSI 370
             P++E+   + P+  L I      + N    +  I   +  NL+ +
Sbjct:   332 PDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHV 376


>UNIPROTKB|G3MYR9 [details] [associations]
            symbol:HDAC8 "Histone deacetylase" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
            of transcription, DNA-dependent" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
            GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
            UniGene:Bt.90254 OMA:IDLDLHH EMBL:DAAA02072645 EMBL:DAAA02072646
            EMBL:DAAA02072647 EMBL:DAAA02072648 EMBL:DAAA02072649
            EMBL:DAAA02072650 EMBL:DAAA02072651 EMBL:DAAA02072652
            EMBL:DAAA02072653 EMBL:DAAA02072654 EMBL:DAAA02072655
            EMBL:DAAA02072656 Ensembl:ENSBTAT00000063475 Uniprot:G3MYR9
        Length = 377

 Score = 798 (286.0 bits), Expect = 2.0e-79, P = 2.0e-79
 Identities = 147/343 (42%), Positives = 220/343 (64%)

Query:    28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQEL 87
             P R  M H L+ +Y LHK+M I +P  A   E+A FH+  Y++ L +++ D        +
Sbjct:    35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMASFHTDAYLQHLQKVSEDGDDDHPDSI 94

Query:    88 TKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFC 147
              +Y LG DCP  E +F++     G TI AA+ L + +C +AINW+GG HHAKK EASGFC
Sbjct:    95 -EYGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFC 153

Query:   148 YINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGD 207
             Y+ND VLGIL L +   R+LY+D+D+HHGDGVE+AF FT +VMTVS HKF   FFPGTGD
Sbjct:   154 YLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGD 213

Query:   208 VKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR 267
             V ++G  +G++Y++NVP++DGI D  +  + ++++ +V   + P A+VLQ GAD++AGD 
Sbjct:   214 VSDVGLGKGRYYSVNVPIQDGIQDERYYHICESVLKEVYIAFNPKAVVLQLGADTIAGDP 273

Query:   268 LGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPE 327
             +  FN++  G  +C++++ ++ L  L+ GGGGY   N ARCWT  TG++L   L +EIP+
Sbjct:   274 MCSFNMTPVGIGKCLKYILQWELATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPD 333

Query:   328 NEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSI 370
             +E+   + P+  L I      + N    +  I   +  NL+ +
Sbjct:   334 HEFFTAYGPDYVLEITPSCRPDRNEPHRVQQILNYIKGNLKHV 376


>UNIPROTKB|J9P5B2 [details] [associations]
            symbol:HDAC8 "Histone deacetylase" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
            of transcription, DNA-dependent" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
            GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
            EMBL:AAEX03026498 EMBL:AAEX03026499 EMBL:AAEX03026500
            Ensembl:ENSCAFT00000048263 Uniprot:J9P5B2
        Length = 415

 Score = 797 (285.6 bits), Expect = 2.6e-79, P = 2.6e-79
 Identities = 148/345 (42%), Positives = 221/345 (64%)

Query:    28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITP--DTQHLFRQ 85
             P R  M H L+ +Y LHK+M I +P  A   E+A FH+  Y++ L +++   D  H    
Sbjct:    73 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDH---P 129

Query:    86 ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
             +  +Y LG DCP  E +F++     G TI AA+ L + +C +AINW+GG HHAKK EASG
Sbjct:   130 DSVEYGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASG 189

Query:   146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
             FCY+ND VLGIL L +   R+LY+D+D+HHGDGVE+AF FT +VMTVS HKF   FFPGT
Sbjct:   190 FCYLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGT 249

Query:   206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
             GDV ++G  +G++Y++NVP++DGI D  +  + ++++ +V   + P A+VLQ GAD++AG
Sbjct:   250 GDVSDVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYIAFNPKAVVLQLGADTIAG 309

Query:   266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI 325
             D +  FN++  G  +C++++ ++ L  L+ GGGGY   N ARCWT  TG++L   L +EI
Sbjct:   310 DPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEI 369

Query:   326 PENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSI 370
             P++E+   + P+  L I      + N    +  I   +  NL+ +
Sbjct:   370 PDHEFFTAYGPDYVLEITPSCRPDRNEPHRVQQILNYIKGNLKHV 414


>UNIPROTKB|F1NFY6 [details] [associations]
            symbol:HDAC8 "Histone deacetylase" species:9031 "Gallus
            gallus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355 GO:GO:0006351
            GO:GO:0070932 GO:GO:0070933 GO:GO:0032041 GO:GO:0097372
            GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
            OMA:IDLDLHH EMBL:AADN02013195 IPI:IPI00582901
            Ensembl:ENSGALT00000007708 Uniprot:F1NFY6
        Length = 377

 Score = 790 (283.2 bits), Expect = 1.4e-78, P = 1.4e-78
 Identities = 151/345 (43%), Positives = 218/345 (63%)

Query:    28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITP--DTQHLFRQ 85
             P R  M H L+ +Y L   M I +P  A   E+A FH+  Y++ L +++   D  H    
Sbjct:    35 PKRASMVHSLIEAYSLLDHMMIIKPKVASMEEMASFHTDAYLQHLQKVSEEGDDDH---P 91

Query:    86 ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
             E  +Y LG DCP  E +F++     G TI AA+ L +  C +AINW GG HHAKK EASG
Sbjct:    92 ESVEYGLGYDCPATEGIFDYAAAVGGATITAAQCLLDGKCKVAINWPGGWHHAKKDEASG 151

Query:   146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
             FCY+ND VLGIL L +   R+LYID+D+HHGDGVE+AF FT +VMTVS HKF   FFPGT
Sbjct:   152 FCYLNDAVLGILRLRQKFDRILYIDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGT 211

Query:   206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
             GDV +IG  +G++Y++NVP++DGI D  + ++ +T++ +V   + P A+VLQ GAD++AG
Sbjct:   212 GDVTDIGLGKGRYYSVNVPIQDGIQDEKYYQICETVLKEVYAAFNPEAVVLQLGADTIAG 271

Query:   266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI 325
             D +  FN++ +G  +C+++V ++ L  L+ GGGGY   N ARCWT  TG++L   L +EI
Sbjct:   272 DPMCSFNMTPEGVGKCLKYVLQWQLATLILGGGGYNLANTARCWTYLTGVILGRTLSSEI 331

Query:   326 PENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSI 370
             P++E+   + P+  L I      + N    +  I   +  NL+ +
Sbjct:   332 PDHEFFTEYGPDYVLEITPSCRPDRNDPQRIQEILNLIKGNLKHV 376


>UNIPROTKB|Q0VCB2 [details] [associations]
            symbol:HDAC8 "Histone deacetylase 8" species:9913 "Bos
            taurus" [GO:0007062 "sister chromatid cohesion" evidence=ISS]
            [GO:0071922 "regulation of cohesin localization to chromatin"
            evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0097372 "NAD-dependent histone
            deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
            activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
            histone deacetylase activity (H3-K14 specific)" evidence=IEA]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
            GO:GO:0046872 GO:GO:0006351 GO:GO:0070932 GO:GO:0070933
            GO:GO:0008278 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOVERGEN:HBG057112 EMBL:BC120257
            IPI:IPI00707449 RefSeq:NP_001069699.1 UniGene:Bt.90254
            ProteinModelPortal:Q0VCB2 SMR:Q0VCB2 GeneID:540666 KEGG:bta:540666
            CTD:55869 KO:K11405 NextBio:20878759 Uniprot:Q0VCB2
        Length = 377

 Score = 789 (282.8 bits), Expect = 1.8e-78, P = 1.8e-78
 Identities = 146/343 (42%), Positives = 219/343 (63%)

Query:    28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQEL 87
             P R  M H L+ +Y LHK+M I +P  A   E+A FH+  Y++ L +++ D        +
Sbjct:    35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMASFHTDAYLQHLQKVSEDGDDDHPDSI 94

Query:    88 TKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFC 147
              +Y LG DCP  E +F++     G TI AA+ L + +C +AINW+GG HHAKK EASGFC
Sbjct:    95 -EYGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFC 153

Query:   148 YINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGD 207
             Y+ND VLGIL L +   R+LY+D+D+HHGDGVE+AF FT +VMTVS HKF   FFPGTGD
Sbjct:   154 YLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGD 213

Query:   208 VKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR 267
             V ++G  +G++Y++NVP++D I D  +  + ++++ +V   + P A+VLQ GAD++AGD 
Sbjct:   214 VSDVGLGKGRYYSVNVPIQDCIQDERYYHICESVLKEVYIAFNPKAVVLQLGADTIAGDP 273

Query:   268 LGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPE 327
             +  FN++  G  +C++++ ++ L  L+ GGGGY   N ARCWT  TG++L   L +EIP+
Sbjct:   274 MCSFNMTPVGIGKCLKYILQWELATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPD 333

Query:   328 NEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSI 370
             +E+   + P+  L I      + N    +  I   +  NL+ +
Sbjct:   334 HEFFTAYGPDYVLEITPSCRPDRNEPHRVQQILNYIKGNLKHV 376


>UNIPROTKB|E2RQK6 [details] [associations]
            symbol:HDAC8 "Histone deacetylase" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0006355 "regulation
            of transcription, DNA-dependent" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR003084
            PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005634 GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
            GO:GO:0070933 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062889
            OMA:IDLDLHH EMBL:AAEX03026498 EMBL:AAEX03026499 EMBL:AAEX03026500
            Ensembl:ENSCAFT00000027174 Uniprot:E2RQK6
        Length = 383

 Score = 776 (278.2 bits), Expect = 4.3e-77, P = 4.3e-77
 Identities = 145/320 (45%), Positives = 211/320 (65%)

Query:    28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITP--DTQHLFRQ 85
             P R  M H L+ +Y LHK+M I +P  A   E+A FH+  Y++ L +++   D  H    
Sbjct:    35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDH---P 91

Query:    86 ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
             +  +Y LG DCP  E +F++     G TI AA+ L + +C +AINW+GG HHAKK EASG
Sbjct:    92 DSVEYGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASG 151

Query:   146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
             FCY+ND VLGIL L +   R+LY+D+D+HHGDGVE+AF FT +VMTVS HKF   FFPGT
Sbjct:   152 FCYLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGT 211

Query:   206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
             GDV ++G  +G++Y++NVP++DGI D  +  + ++++ +V   + P A+VLQ GAD++AG
Sbjct:   212 GDVSDVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYIAFNPKAVVLQLGADTIAG 271

Query:   266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG--GGYTKENVARCWTVETGILLDTELPN 323
             D +  FN++  G  +C++++ ++ L  L+ GG  GGY   N ARCWT  TG++L   L +
Sbjct:   272 DPMCSFNMTPVGIGKCLKYILQWQLATLILGGETGGYNLANTARCWTYLTGVILGKTLSS 331

Query:   324 EIPENEYIKYFAPECSLRIP 343
             EIP++E     +P   L IP
Sbjct:   332 EIPDHEVKSCLSPVSVLIIP 351


>UNIPROTKB|F5GXM1 [details] [associations]
            symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=IDA] InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0004407 HGNC:HGNC:4852
            ChiTaRS:HDAC1 EMBL:AL109945 IPI:IPI01010320
            ProteinModelPortal:F5GXM1 SMR:F5GXM1 PRIDE:F5GXM1
            Ensembl:ENST00000373541 UCSC:uc001bvc.1 ArrayExpress:F5GXM1
            Bgee:F5GXM1 Uniprot:F5GXM1
        Length = 289

 Score = 738 (264.8 bits), Expect = 4.6e-73, P = 4.6e-73
 Identities = 132/237 (55%), Positives = 179/237 (75%)

Query:   190 MTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETY 249
             MTVSFHK+G+ +FPGTGD+++IG  +GK+YA+N PL+DGIDD S+  +FK ++SKV+E +
Sbjct:     1 MTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVMSKVMEMF 59

Query:   250 APGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCW 309
              P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT  NVARCW
Sbjct:    60 QPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTIRNVARCW 119

Query:   310 TVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRS 369
             T ET + LDTE+PNE+P N+Y +YF P+  L I   ++ N N+  YL  IK ++ ENLR 
Sbjct:   120 TYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQRLFENLRM 179

Query:   370 IQHAPSVQMQEVPPDFYIPEF--DEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 424
             + HAP VQMQ +P D  IPE   DEDE +PD+R+   + DK+I  ++EF + + + +
Sbjct:   180 LPHAPGVQMQAIPEDA-IPEESGDEDEDDPDKRISICSSDKRIACEEEFSDSEEEGE 235


>TAIR|locus:2076053 [details] [associations]
            symbol:hda17 "histone deacetylase 17" species:3702
            "Arabidopsis thaliana" [GO:0004407 "histone deacetylase activity"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0016575
            "histone deacetylation" evidence=IEA] INTERPRO:IPR000286
            GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0006355
            GO:GO:0006351 EMBL:AL353818 GO:GO:0070932 GO:GO:0070933
            eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 KO:K06067 HSSP:Q9BY41 HOGENOM:HOG000112868
            ProtClustDB:CLSN2684485 EMBL:BT014712 IPI:IPI00519666 PIR:T48929
            RefSeq:NP_190035.1 UniGene:At.66492 ProteinModelPortal:Q9LXN8
            SMR:Q9LXN8 PaxDb:Q9LXN8 EnsemblPlants:AT3G44490.1 GeneID:823574
            KEGG:ath:AT3G44490 TAIR:At3g44490 InParanoid:Q9LXN8 OMA:GGECVEY
            PhylomeDB:Q9LXN8 Genevestigator:Q9LXN8 Uniprot:Q9LXN8
        Length = 158

 Score = 710 (255.0 bits), Expect = 4.3e-70, P = 4.3e-70
 Identities = 127/154 (82%), Positives = 145/154 (94%)

Query:   271 FNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEY 330
             F++   GHAECV+FVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI EN+Y
Sbjct:     3 FSMLFTGHAECVKFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEISENDY 62

Query:   331 IKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPEF 390
             IKYFAP+ SL+IP GHIENLN+KSY+S+IK+Q+LENLR IQHAPSVQMQEVPPDFYIP+F
Sbjct:    63 IKYFAPDFSLKIPGGHIENLNTKSYISSIKVQILENLRYIQHAPSVQMQEVPPDFYIPDF 122

Query:   391 DEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 424
             DEDEQNPD R+DQ ++DKQIQRDDE+++GDNDND
Sbjct:   123 DEDEQNPDVRVDQRSRDKQIQRDDEYFDGDNDND 156


>UNIPROTKB|E7EVA8 [details] [associations]
            symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 EMBL:AL133500
            EMBL:BX295542 HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI00641848
            ProteinModelPortal:E7EVA8 SMR:E7EVA8 PRIDE:E7EVA8
            Ensembl:ENST00000415409 ArrayExpress:E7EVA8 Bgee:E7EVA8
            Uniprot:E7EVA8
        Length = 299

 Score = 381 (139.2 bits), Expect = 3.7e-64, Sum P(2) = 3.7e-64
 Identities = 72/153 (47%), Positives = 99/153 (64%)

Query:    28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITP--DTQHLFRQ 85
             P R  M H L+ +Y LHK+M I +P  A   E+A FH+  Y++ L +++   D  H    
Sbjct:    35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDH---P 91

Query:    86 ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
             +  +Y LG DCP  E +F++     G TI AA+ L + +C +AINW+GG HHAKK EASG
Sbjct:    92 DSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASG 151

Query:   146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDG 178
             FCY+ND VLGIL L +   R+LY+D+D+HHGDG
Sbjct:   152 FCYLNDAVLGILRLRRKFERILYVDLDLHHGDG 184

 Score = 291 (107.5 bits), Expect = 3.7e-64, Sum P(2) = 3.7e-64
 Identities = 47/114 (41%), Positives = 82/114 (71%)

Query:   204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
             GTGDV ++G  +G++Y++NVP++DGI D  + ++ ++++ +V + + P A+VLQ GAD++
Sbjct:   184 GTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTI 243

Query:   264 AGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILL 317
             AGD +  FN++  G  +C++++ ++ L  L+ GGGGY   N ARCWT  TG++L
Sbjct:   244 AGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVIL 297


>TAIR|locus:2098105 [details] [associations]
            symbol:hda10 "histone deacetylase 10" species:3702
            "Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
            [GO:0004407 "histone deacetylase activity" evidence=ISS]
            INTERPRO:IPR000286 GO:GO:0005634 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0006355 GO:GO:0006351 GO:GO:0070932
            GO:GO:0070933 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
            GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 KO:K06067 EMBL:AL138652 IPI:IPI00526042
            PIR:T47441 RefSeq:NP_190052.1 UniGene:At.53729 HSSP:Q9BY41
            ProteinModelPortal:Q9M1N8 SMR:Q9M1N8 EnsemblPlants:AT3G44660.1
            GeneID:823592 KEGG:ath:AT3G44660 TAIR:At3g44660
            HOGENOM:HOG000112868 InParanoid:Q9M1N8 OMA:WQLERTK PhylomeDB:Q9M1N8
            ProtClustDB:CLSN2684485 Genevestigator:Q9M1N8 Uniprot:Q9M1N8
        Length = 142

 Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
 Identities = 110/136 (80%), Positives = 126/136 (92%)

Query:   292 LLVTGG---GGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIE 348
             +L TG    GGYTKENVARCWTVETGILLDTELPNEIPEN+YIKYFAP+ SL+IP GHIE
Sbjct:     5 MLFTGHAECGGYTKENVARCWTVETGILLDTELPNEIPENDYIKYFAPDFSLKIPGGHIE 64

Query:   349 NLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERMDQHTQDK 408
             NLN+KSY+S+IK+Q+LENLR IQHAPSVQMQEVPPDFYIP+FDEDEQNPD R+DQ ++DK
Sbjct:    65 NLNTKSYISSIKVQILENLRYIQHAPSVQMQEVPPDFYIPDFDEDEQNPDVRVDQRSRDK 124

Query:   409 QIQRDDEFYEGDNDND 424
             QIQRDDE+++GDNDND
Sbjct:   125 QIQRDDEYFDGDNDND 140


>RGD|1309799 [details] [associations]
            symbol:Hdac1 "histone deacetylase 1" species:10116 "Rattus
            norvegicus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
            evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=ISO]
            [GO:0000792 "heterochromatin" evidence=ISO] [GO:0001047 "core
            promoter binding" evidence=ISO] [GO:0001103 "RNA polymerase II
            repressing transcription factor binding" evidence=ISO] [GO:0001106
            "RNA polymerase II transcription corepressor activity"
            evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003682
            "chromatin binding" evidence=ISO] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=ISO]
            [GO:0003714 "transcription corepressor activity" evidence=ISO]
            [GO:0004407 "histone deacetylase activity" evidence=ISO;IMP]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005654 "nucleoplasm" evidence=ISO]
            [GO:0005667 "transcription factor complex" evidence=ISO]
            [GO:0005829 "cytosol" evidence=ISO] [GO:0006476 "protein
            deacetylation" evidence=ISO] [GO:0007492 "endoderm development"
            evidence=ISO] [GO:0008134 "transcription factor binding"
            evidence=ISO] [GO:0008284 "positive regulation of cell
            proliferation" evidence=ISO] [GO:0008285 "negative regulation of
            cell proliferation" evidence=IDA] [GO:0009913 "epidermal cell
            differentiation" evidence=ISO] [GO:0010870 "positive regulation of
            receptor biosynthetic process" evidence=ISO] [GO:0016575 "histone
            deacetylation" evidence=ISO] [GO:0016580 "Sin3 complex"
            evidence=ISO] [GO:0016581 "NuRD complex" evidence=ISO] [GO:0017053
            "transcriptional repressor complex" evidence=ISO] [GO:0019899
            "enzyme binding" evidence=ISO] [GO:0021766 "hippocampus
            development" evidence=ISO] [GO:0030182 "neuron differentiation"
            evidence=ISO] [GO:0032403 "protein complex binding" evidence=IDA]
            [GO:0033558 "protein deacetylase activity" evidence=ISO]
            [GO:0033613 "activating transcription factor binding" evidence=ISO]
            [GO:0034599 "cellular response to oxidative stress" evidence=IDA]
            [GO:0042475 "odontogenesis of dentin-containing tooth"
            evidence=ISO] [GO:0042493 "response to drug" evidence=IEP]
            [GO:0042733 "embryonic digit morphogenesis" evidence=ISO]
            [GO:0042826 "histone deacetylase binding" evidence=ISO] [GO:0043025
            "neuronal cell body" evidence=ISO] [GO:0043066 "negative regulation
            of apoptotic process" evidence=ISO] [GO:0043234 "protein complex"
            evidence=ISO;IDA] [GO:0043524 "negative regulation of neuron
            apoptotic process" evidence=IMP] [GO:0043922 "negative regulation
            by host of viral transcription" evidence=ISO] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=ISO;IDA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISO] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISO] [GO:0048714
            "positive regulation of oligodendrocyte differentiation"
            evidence=ISO] [GO:0060766 "negative regulation of androgen receptor
            signaling pathway" evidence=ISO] [GO:0060789 "hair follicle placode
            formation" evidence=ISO] [GO:0061029 "eyelid development in
            camera-type eye" evidence=ISO] [GO:0061198 "fungiform papilla
            formation" evidence=ISO] [GO:0070932 "histone H3 deacetylation"
            evidence=ISO;IMP] [GO:0070933 "histone H4 deacetylation"
            evidence=ISO] [GO:0090090 "negative regulation of canonical Wnt
            receptor signaling pathway" evidence=ISO] [GO:0005730 "nucleolus"
            evidence=ISO] [GO:0010832 "negative regulation of myotube
            differentiation" evidence=ISO] Pfam:PF00850 RGD:1309799 RGD:619975
            INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0045892 GO:GO:0008285
            GO:GO:0043234 GO:GO:0032403 GO:GO:0042493 GO:GO:0034599
            GO:GO:0043524 GO:GO:0000785 GO:GO:0070932 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0004407
            HOVERGEN:HBG057112 EMBL:AF321129 IPI:IPI00201536 UniGene:Rn.123394
            ProteinModelPortal:Q99PA2 STRING:Q99PA2 InParanoid:Q99PA2
            OMA:KCIACEE Genevestigator:Q99PA2 Uniprot:Q99PA2
        Length = 256

 Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
 Identities = 110/205 (53%), Positives = 147/205 (71%)

Query:   222 NVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAEC 281
             N PL+DGIDD S+  +FK ++SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+C
Sbjct:     1 NYPLRDGIDDESYEAIFKPVMSKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKC 60

Query:   282 VRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLR 341
             V FVK FNLP+L+ GG GYT  NVARCWT ET + LDTE+PNE+P N+Y +YF P+  L 
Sbjct:    61 VEFVKSFNLPMLMLGGDGYTIHNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLH 120

Query:   342 IPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPEF--DEDEQNPDE 399
             I   ++ N N+  YL  IK ++ ENLR + H P VQMQ +P D  IPE   DEDE++PD+
Sbjct:   121 ISPSNMTNQNTNEYLEKIKQRLFENLRMLPHTPGVQMQAIPEDA-IPEESGDEDEEDPDK 179

Query:   400 RMDQHTQDKQIQRDDEFYEGDNDND 424
              +   + DK I  ++EF + D + +
Sbjct:   180 PISICSSDKCIACEEEFPDSDEEGE 204


>UNIPROTKB|A6NGJ7 [details] [associations]
            symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
            sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            HOVERGEN:HBG057112 EMBL:AL133500 EMBL:BX295542 IPI:IPI00645124
            HGNC:HGNC:13315 ChiTaRS:HDAC8 ProteinModelPortal:A6NGJ7 SMR:A6NGJ7
            STRING:A6NGJ7 Ensembl:ENST00000373568 ArrayExpress:A6NGJ7
            Bgee:A6NGJ7 Uniprot:A6NGJ7
        Length = 248

 Score = 562 (202.9 bits), Expect = 2.9e-58, Sum P(2) = 2.9e-58
 Identities = 97/199 (48%), Positives = 145/199 (72%)

Query:   132 AGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMT 191
             A  LH   + EASGFCY+ND VLGIL L +   R+LY+D+D+HHGDGVE+AF FT +VMT
Sbjct:    47 AYALHKQMRDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMT 106

Query:   192 VSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAP 251
             VS HKF   FFPGTGDV ++G  +G++Y++NVP++DGI D  + ++ ++++ +V + + P
Sbjct:   107 VSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNP 166

Query:   252 GAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTV 311
              A+VLQ GAD++AGD +  FN++  G  +C++++ ++ L  L+ GGGGY   N ARCWT 
Sbjct:   167 KAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTY 226

Query:   312 ETGILLDTELPNEIPENEY 330
              TG++L   L +EIP++E+
Sbjct:   227 LTGVILGKTLSSEIPDHEF 245

 Score = 54 (24.1 bits), Expect = 2.9e-58, Sum P(2) = 2.9e-58
 Identities = 10/20 (50%), Positives = 13/20 (65%)

Query:    28 PHRLCMTHHLVLSYDLHKKM 47
             P R  M H L+ +Y LHK+M
Sbjct:    35 PKRASMVHSLIEAYALHKQM 54


>UNIPROTKB|Q74DU3 [details] [associations]
            symbol:GSU1222 "Histone deacetylase family protein"
            species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 EMBL:AE017180 GenomeReviews:AE017180_GR
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 GO:GO:0004407 HOGENOM:HOG000225181 KO:K04768
            OMA:CDGRWIA RefSeq:NP_952275.1 ProteinModelPortal:Q74DU3
            GeneID:2685273 KEGG:gsu:GSU1222 PATRIC:22025215
            ProtClustDB:CLSK828246 BioCyc:GSUL243231:GH27-1229-MONOMER
            Uniprot:Q74DU3
        Length = 385

 Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
 Identities = 125/326 (38%), Positives = 183/326 (56%)

Query:     6 KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHK--KMEIYRPHKAYPVELAQF 63
             + +  Y  D     +G +HP K  R  +   L+ +Y L +   ++I    +A    L  F
Sbjct:     4 RTALIYSNDFARFSYGDDHPFKIQRFILAFELMRAYGLMELPNVKILDCPRAAEEALLTF 63

Query:    64 HSADYVEFLHRITPDTQHLFRQELTKYNLGE-DCPVFENLFEFCQIYAGGTIDAARRLNN 122
             H+ DY++ L   +       R +  +Y LG+ D PVF  L+++ ++ AGGTI+AAR +  
Sbjct:    64 HAPDYLDRLREFSESDDA--RADF-RYGLGDLDNPVFRGLYDWARLGAGGTIEAARLVAE 120

Query:   123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             +  DIA N AGG HHA + +ASGF Y+ND V+ I  LL+   RV Y+DID HHGDGV+EA
Sbjct:   121 EGYDIAFNLAGGWHHAHRAKASGFSYLNDAVVAINLLLEKGLRVAYLDIDAHHGDGVQEA 180

Query:   183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
             FY TDRV+T+S H+ G  FFPGTG   E G   G  Y++N+PL    DD  F + F  + 
Sbjct:   181 FYDTDRVLTISIHESGMYFFPGTGFEGETGTGAGTGYSVNIPLVAHADDALFMKAFDEVA 240

Query:   243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
               ++  Y P  +V Q GAD+   D L    ++   +   +R +K   +P +  GGGGY  
Sbjct:   241 FPLLAAYNPDVLVTQLGADTFRTDPLTRLEVTTHSYTYILRKLKALGIPWVAVGGGGYNL 300

Query:   303 ENVARCWTVETGILLDTELPNEIPEN 328
              NVAR WT+  G++   ELP  +P++
Sbjct:   301 VNVARAWTLAWGVMNGVELPPRLPDS 326


>TIGR_CMR|GSU_1222 [details] [associations]
            symbol:GSU_1222 "histone deacetylase/AcuC/AphA family
            protein" species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 EMBL:AE017180 GenomeReviews:AE017180_GR
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 GO:GO:0004407 HOGENOM:HOG000225181 KO:K04768
            OMA:CDGRWIA RefSeq:NP_952275.1 ProteinModelPortal:Q74DU3
            GeneID:2685273 KEGG:gsu:GSU1222 PATRIC:22025215
            ProtClustDB:CLSK828246 BioCyc:GSUL243231:GH27-1229-MONOMER
            Uniprot:Q74DU3
        Length = 385

 Score = 592 (213.5 bits), Expect = 1.4e-57, P = 1.4e-57
 Identities = 125/326 (38%), Positives = 183/326 (56%)

Query:     6 KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHK--KMEIYRPHKAYPVELAQF 63
             + +  Y  D     +G +HP K  R  +   L+ +Y L +   ++I    +A    L  F
Sbjct:     4 RTALIYSNDFARFSYGDDHPFKIQRFILAFELMRAYGLMELPNVKILDCPRAAEEALLTF 63

Query:    64 HSADYVEFLHRITPDTQHLFRQELTKYNLGE-DCPVFENLFEFCQIYAGGTIDAARRLNN 122
             H+ DY++ L   +       R +  +Y LG+ D PVF  L+++ ++ AGGTI+AAR +  
Sbjct:    64 HAPDYLDRLREFSESDDA--RADF-RYGLGDLDNPVFRGLYDWARLGAGGTIEAARLVAE 120

Query:   123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
             +  DIA N AGG HHA + +ASGF Y+ND V+ I  LL+   RV Y+DID HHGDGV+EA
Sbjct:   121 EGYDIAFNLAGGWHHAHRAKASGFSYLNDAVVAINLLLEKGLRVAYLDIDAHHGDGVQEA 180

Query:   183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
             FY TDRV+T+S H+ G  FFPGTG   E G   G  Y++N+PL    DD  F + F  + 
Sbjct:   181 FYDTDRVLTISIHESGMYFFPGTGFEGETGTGAGTGYSVNIPLVAHADDALFMKAFDEVA 240

Query:   243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
               ++  Y P  +V Q GAD+   D L    ++   +   +R +K   +P +  GGGGY  
Sbjct:   241 FPLLAAYNPDVLVTQLGADTFRTDPLTRLEVTTHSYTYILRKLKALGIPWVAVGGGGYNL 300

Query:   303 ENVARCWTVETGILLDTELPNEIPEN 328
              NVAR WT+  G++   ELP  +P++
Sbjct:   301 VNVARAWTLAWGVMNGVELPPRLPDS 326


>UNIPROTKB|A6NMT1 [details] [associations]
            symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
            HOVERGEN:HBG057112 EMBL:AL133500 EMBL:BX295542 HGNC:HGNC:13315
            ChiTaRS:HDAC8 IPI:IPI00941989 ProteinModelPortal:A6NMT1 SMR:A6NMT1
            STRING:A6NMT1 Ensembl:ENST00000373571 ArrayExpress:A6NMT1
            Bgee:A6NMT1 Uniprot:A6NMT1
        Length = 253

 Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
 Identities = 104/212 (49%), Positives = 145/212 (68%)

Query:    28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITP--DTQHLFRQ 85
             P R  M H L+ +Y LHK+M I +P  A   E+A FH+  Y++ L +++   D  H    
Sbjct:    35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDH---P 91

Query:    86 ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
             +  +Y LG DCP  E +F++     G TI AA+ L + +C +AINW+GG HHAKK EASG
Sbjct:    92 DSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASG 151

Query:   146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
             FCY+ND VLGIL L +   R+LY+D+D+HHGDGVE+AF FT +VMTVS HKF   FFPGT
Sbjct:   152 FCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGT 211

Query:   206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRL 237
             GDV ++G  +G++Y++NVP++DGI D  + ++
Sbjct:   212 GDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQI 243


>UNIPROTKB|I3L5X0 [details] [associations]
            symbol:HDAC8 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            GeneTree:ENSGT00530000062889 EMBL:CU466457
            Ensembl:ENSSSCT00000027685 OMA:ICERYEP Uniprot:I3L5X0
        Length = 256

 Score = 567 (204.7 bits), Expect = 6.1e-55, P = 6.1e-55
 Identities = 104/209 (49%), Positives = 143/209 (68%)

Query:    28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITP--DTQHLFRQ 85
             P R  M H L+ +Y LHK+M I +P  A   E+A FH+  Y++ L +++   D  H    
Sbjct:    35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDH---P 91

Query:    86 ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
             +  +Y LG DCP  E +F++     G TI AA+ L + +C +AINW+GG HHAKK EASG
Sbjct:    92 DSIEYGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASG 151

Query:   146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
             FCY+ND VLGIL L +   R+LY+D+D+HHGDGVE+AF FT +VMTVS HKF   FFPGT
Sbjct:   152 FCYLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGT 211

Query:   206 GDVKEIGEREGKFYAINVPLKDGIDDTSF 234
             GDV ++G  +G++Y++NVP++DGI D  +
Sbjct:   212 GDVSDVGLGKGRYYSVNVPIQDGIQDEKY 240


>UNIPROTKB|H3BM24 [details] [associations]
            symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
            Ensembl:ENST00000425835 Bgee:H3BM24 Uniprot:H3BM24
        Length = 161

 Score = 564 (203.6 bits), Expect = 1.3e-54, P = 1.3e-54
 Identities = 93/157 (59%), Positives = 126/157 (80%)

Query:     6 KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
             K+ Y+YDGD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS
Sbjct:     1 KVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHS 60

Query:    66 ADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLC 125
              +Y++FL  I PD    + +++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q  
Sbjct:    61 DEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQT 120

Query:   126 DIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKY 162
             D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKY
Sbjct:   121 DMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKY 157


>UNIPROTKB|E7ENE4 [details] [associations]
            symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR003084 PIRSF:PIRSF037913 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 EMBL:AL133500
            EMBL:BX295542 HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI01018767
            ProteinModelPortal:E7ENE4 SMR:E7ENE4 Ensembl:ENST00000373561
            ArrayExpress:E7ENE4 Bgee:E7ENE4 Uniprot:E7ENE4
        Length = 272

 Score = 560 (202.2 bits), Expect = 3.4e-54, P = 3.4e-54
 Identities = 102/216 (47%), Positives = 146/216 (67%)

Query:    28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITP--DTQHLFRQ 85
             P R  M H L+ +Y LHK+M I +P  A   E+A FH+  Y++ L +++   D  H    
Sbjct:    35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDH---P 91

Query:    86 ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
             +  +Y LG DCP  E +F++     G TI AA+ L + +C +AINW+GG HHAKK EASG
Sbjct:    92 DSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASG 151

Query:   146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
             FCY+ND VLGIL L +   R+LY+D+D+HHGDGVE+AF FT +VMTVS HKF   FFPG 
Sbjct:   152 FCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGK 211

Query:   206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
              DV ++G  +G++Y++NVP++DGI D  + ++ +++
Sbjct:   212 SDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESV 247


>UNIPROTKB|Q5TEE2 [details] [associations]
            symbol:HDAC1 "Histone deacetylase 1" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
            HOVERGEN:HBG057112 UniGene:Hs.88556 HGNC:HGNC:4852 ChiTaRS:HDAC1
            EMBL:AL109945 IPI:IPI00514649 SMR:Q5TEE2 MINT:MINT-1409030
            STRING:Q5TEE2 Ensembl:ENST00000428704 Uniprot:Q5TEE2
        Length = 211

 Score = 501 (181.4 bits), Expect = 6.0e-48, P = 6.0e-48
 Identities = 97/155 (62%), Positives = 121/155 (78%)

Query:    85 QELTKYNLGEDCPVF------ENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHA 138
             +E+TKY+  +D   F      +N+ E+ +     +   A +LN Q  DIA+NWAGGLHHA
Sbjct:    62 EEMTKYH-SDDYIKFLRSIRPDNMSEYSKQMQRSS---AVKLNKQQTDIAVNWAGGLHHA 117

Query:   139 KKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFG 198
             KK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAFY TDRVMTVSFHK+G
Sbjct:   118 KKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAFYTTDRVMTVSFHKYG 177

Query:   199 DLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTS 233
             + +FPGTGD+++IG  +GK+YA+N PL+DGIDD S
Sbjct:   178 E-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDES 211

 Score = 272 (100.8 bits), Expect = 2.0e-23, P = 2.0e-23
 Identities = 44/87 (50%), Positives = 66/87 (75%)

Query:     3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
             ++ K+ Y+YDGDVG+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ +
Sbjct:     7 TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66

Query:    63 FHSADYVEFLHRITPDTQHLFRQELTK 89
             +HS DY++FL  I PD    + +++ +
Sbjct:    67 YHSDDYIKFLRSIRPDNMSEYSKQMQR 93


>SGD|S000006272 [details] [associations]
            symbol:HOS1 "Class I histone deacetylase (HDAC) family
            member" species:4932 "Saccharomyces cerevisiae" [GO:0031078
            "histone deacetylase activity (H3-K14 specific)" evidence=IEA]
            [GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
            specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
            (H3-K9 specific)" evidence=IEA] [GO:0034739 "histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IMP] [GO:0070932 "histone H3
            deacetylation" evidence=IEA] [GO:0097372 "NAD-dependent histone
            deacetylase activity (H3-K18 specific)" evidence=IEA] [GO:0070933
            "histone H4 deacetylation" evidence=IMP] [GO:0000118 "histone
            deacetylase complex" evidence=IPI] [GO:0004407 "histone deacetylase
            activity" evidence=ISA] [GO:0033558 "protein deacetylase activity"
            evidence=IMP;IDA;IPI] [GO:0034983 "peptidyl-lysine deacetylation"
            evidence=IMP;IDA;IPI] SGD:S000006272 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0045944 GO:GO:0006351 EMBL:Z71255
            EMBL:BK006949 EMBL:Z49219 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
            eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225180 GO:GO:0004407
            GeneTree:ENSGT00390000003411 GO:GO:0034983 PIR:S54089
            RefSeq:NP_015393.1 ProteinModelPortal:Q12214 SMR:Q12214
            DIP:DIP-7974N IntAct:Q12214 STRING:Q12214 PaxDb:Q12214
            EnsemblFungi:YPR068C GeneID:856181 KEGG:sce:YPR068C CYGD:YPR068c
            KO:K11482 OrthoDB:EOG422DTQ NextBio:981352 Genevestigator:Q12214
            GermOnline:YPR068C Uniprot:Q12214
        Length = 470

 Score = 455 (165.2 bits), Expect = 2.0e-47, Sum P(2) = 2.0e-47
 Identities = 92/240 (38%), Positives = 139/240 (57%)

Query:    77 PDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLH 136
             P   ++   E  +YNL  DCP+F  L  +CQ+  G T++    L+     I INW GG H
Sbjct:   151 PTDTYILNSETKQYNLEGDCPIFSYLPMYCQVITGATLNLLDHLSPTERLIGINWDGGRH 210

Query:   137 HAKKCEASGFCYINDLVLGILELLKYHA-RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFH 195
             HA K  ASGFCYIND+VL I  L K    ++ Y+D D+HHGDGVE+AF ++ ++ T+S H
Sbjct:   211 HAFKQRASGFCYINDVVLLIQRLRKAKLNKITYVDFDLHHGDGVEKAFQYSKQIQTISVH 270

Query:   196 KFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIV 255
              +   FFPGTG + +   R+ K   +N+PLK G DD     +   I++ ++E + P A++
Sbjct:   271 LYEPGFFPGTGSLSD--SRKDK-NVVNIPLKHGCDDNYLELIASKIVNPLIERHEPEALI 327

Query:   256 LQCGADSLAGDRLGCFNLSIDGHAECV-RFVKKF-NLPLLVTGGGGYTKENVARCWTVET 313
             ++CG D L GDR   + L+I G +  +   +K +    + + GGGGY    ++R +T  T
Sbjct:   328 IECGGDGLLGDRFNEWQLTIRGLSRIIINIMKSYPRAHIFLLGGGGYNDLLMSRFYTYLT 387

 Score = 58 (25.5 bits), Expect = 2.0e-47, Sum P(2) = 2.0e-47
 Identities = 15/50 (30%), Positives = 27/50 (54%)

Query:    25 PMKPHRLC-MTHHLVLSYDLHKKM-EIYRPHKAYPVELAQFHSADYVEFL 72
             P   H+   +T+ L+ +YDL +   E+     A   +L +FHS  Y+++L
Sbjct:    20 PCNNHQKSQLTYSLINAYDLLQHFDEVLTFPYARKDDLLEFHSKSYIDYL 69


>CGD|CAL0001747 [details] [associations]
            symbol:HOS1 species:5476 "Candida albicans" [GO:0004407
            "histone deacetylase activity" evidence=ISS] [GO:0000118 "histone
            deacetylase complex" evidence=IEA] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0070933 "histone H4 deacetylation" evidence=IEA] [GO:0034983
            "peptidyl-lysine deacetylation" evidence=IEA] CGD:CAL0001747
            Pfam:PF00850 INTERPRO:IPR000286 EMBL:AACQ01000179 EMBL:AACQ01000178
            eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11482
            RefSeq:XP_711859.1 RefSeq:XP_723599.1 ProteinModelPortal:Q59Q78
            GeneID:3646518 GeneID:3646538 KEGG:cal:CaO19.11889
            KEGG:cal:CaO19.4411 Uniprot:Q59Q78
        Length = 436

 Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
 Identities = 108/292 (36%), Positives = 172/292 (58%)

Query:    89 KYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD-----IAINWAGGLHHAKKCEA 143
             KY L  DC  F +L  + Q+ A  +I+AAR++  Q+ +     IA+NW GG HH  K  A
Sbjct:   149 KYGLTFDCYPFPSLDLYVQLTAASSINAARKIVQQVKETKDQIIAVNWYGGRHHCHKSHA 208

Query:   144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
             +GFCY+ND+VL I  L K    V Y+D+D+HHGDGVE AF F+ +V T S H++   F+P
Sbjct:   209 AGFCYVNDVVLSINILRKNLGSVFYLDLDLHHGDGVENAFKFSKKVATCSIHRYDIGFYP 268

Query:   204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
             GTG +K    RE  +   N+P + G++D+S   + K I++ ++  + P AIV+QCG D L
Sbjct:   269 GTGSLKS--SRENTY---NIPTEKGLNDSSMLWIIKEIVAPLISNFGPRAIVIQCGCDGL 323

Query:   264 AGDRLGCFNLSIDGHAECVRFV-KKFN-LPLLVTGGGGYTKENVARCWTVETGILL---D 318
             A D    +N++I G+ + + ++   F+ +P+++ GGGGY+    A+CWT  TG +L   D
Sbjct:   324 ALDTHKEWNMTIKGYRDSIDWILSHFSEIPIMLLGGGGYSHTETAKCWTYLTGSVLGVSD 383

Query:   319 TELPNEIPENEYIKYFAPECSLRIPNGH------IENLNSKSYLSTIKMQVL 364
              +  + +PE++ +  +  +   R    H      +++ NS  YL+ IK  +L
Sbjct:   384 IDTWDILPEHKNLDAYEKD-GFRFWTDHNSGPSKMKDHNSVEYLNDIKTHLL 434


>UNIPROTKB|Q59Q78 [details] [associations]
            symbol:HOS1 "Likely histone deacetylase Hos1p"
            species:237561 "Candida albicans SC5314" [GO:0004407 "histone
            deacetylase activity" evidence=ISS] [GO:0016575 "histone
            deacetylation" evidence=ISS] CGD:CAL0001747 Pfam:PF00850
            INTERPRO:IPR000286 EMBL:AACQ01000179 EMBL:AACQ01000178
            eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 KO:K11482
            RefSeq:XP_711859.1 RefSeq:XP_723599.1 ProteinModelPortal:Q59Q78
            GeneID:3646518 GeneID:3646538 KEGG:cal:CaO19.11889
            KEGG:cal:CaO19.4411 Uniprot:Q59Q78
        Length = 436

 Score = 494 (179.0 bits), Expect = 3.3e-47, P = 3.3e-47
 Identities = 108/292 (36%), Positives = 172/292 (58%)

Query:    89 KYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD-----IAINWAGGLHHAKKCEA 143
             KY L  DC  F +L  + Q+ A  +I+AAR++  Q+ +     IA+NW GG HH  K  A
Sbjct:   149 KYGLTFDCYPFPSLDLYVQLTAASSINAARKIVQQVKETKDQIIAVNWYGGRHHCHKSHA 208

Query:   144 SGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFP 203
             +GFCY+ND+VL I  L K    V Y+D+D+HHGDGVE AF F+ +V T S H++   F+P
Sbjct:   209 AGFCYVNDVVLSINILRKNLGSVFYLDLDLHHGDGVENAFKFSKKVATCSIHRYDIGFYP 268

Query:   204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSL 263
             GTG +K    RE  +   N+P + G++D+S   + K I++ ++  + P AIV+QCG D L
Sbjct:   269 GTGSLKS--SRENTY---NIPTEKGLNDSSMLWIIKEIVAPLISNFGPRAIVIQCGCDGL 323

Query:   264 AGDRLGCFNLSIDGHAECVRFV-KKFN-LPLLVTGGGGYTKENVARCWTVETGILL---D 318
             A D    +N++I G+ + + ++   F+ +P+++ GGGGY+    A+CWT  TG +L   D
Sbjct:   324 ALDTHKEWNMTIKGYRDSIDWILSHFSEIPIMLLGGGGYSHTETAKCWTYLTGSVLGVSD 383

Query:   319 TELPNEIPENEYIKYFAPECSLRIPNGH------IENLNSKSYLSTIKMQVL 364
              +  + +PE++ +  +  +   R    H      +++ NS  YL+ IK  +L
Sbjct:   384 IDTWDILPEHKNLDAYEKD-GFRFWTDHNSGPSKMKDHNSVEYLNDIKTHLL 434


>UNIPROTKB|Q3AFN8 [details] [associations]
            symbol:acuC "Acetoin utilization protein AcuC"
            species:246194 "Carboxydothermus hydrogenoformans Z-2901"
            [GO:0003674 "molecular_function" evidence=ND] [GO:0006091
            "generation of precursor metabolites and energy" evidence=ISS]
            [GO:0045150 "acetoin catabolic process" evidence=ISS]
            InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
            EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006091 GO:GO:0045150
            eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:YP_359046.1 STRING:Q3AFN8
            GeneID:3726493 KEGG:chy:CHY_0174 PATRIC:21273533
            HOGENOM:HOG000225181 KO:K04768 OMA:CDGRWIA
            BioCyc:CHYD246194:GJCN-175-MONOMER Uniprot:Q3AFN8
        Length = 383

 Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
 Identities = 111/373 (29%), Positives = 179/373 (47%)

Query:     6 KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
             K    Y  D  S     +HP+ P R  +   L+   ++ K+ EI  P  A   EL   H 
Sbjct:     4 KAYLIYSDDYLSYRLAEDHPLNPQRYALAVELMKIAEVLKEEEIIPPRSATLKELYLVHD 63

Query:    66 ADYVEFLHRITPDTQHLFRQELTKYNLG-EDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
               YVE +  ++ + +++     +++ LG ED PVF  + E   + AGG+   A  +    
Sbjct:    64 PAYVEAVMNLSKNPENV---NGSRFGLGSEDNPVFSGMHEAAALVAGGSALGAELIYEGE 120

Query:   125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
              D   N AGGLHHA +  ASGFC  NDL + I +  +   +V Y+D+D HHGDGV+  FY
Sbjct:   121 ADHVFNIAGGLHHALRDAASGFCIYNDLAVAIAKFREKGLKVAYVDLDAHHGDGVQWLFY 180

Query:   185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
                 V+T+S H+ G   FPGTG + E+GE       IN+PL+   +D S+    + I+ +
Sbjct:   181 SDPGVLTISIHETGRYLFPGTGSITELGEGAAYGTKINIPLEPYTEDDSWLWALEEIVPE 240

Query:   245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPL-----LVTGGGG 299
             ++  + P  +V Q G DS   D L     +     E  + + +    +     L  GGGG
Sbjct:   241 LIRKFKPDILVTQHGCDSHRFDPLTHLANTTLAFQESAKLLHELAHEVCGGRWLAGGGGG 300

Query:   300 YTKENVA-RCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLST 358
             Y    V  R WT+    + +  LP ++P   + KY + +  + +P   ++  +S   L  
Sbjct:   301 YDYWRVVPRAWTIVWAEMTERSLPYDVPATFWRKYES-KAGVFLPRTFLDEGSSGIPLGR 359

Query:   359 IKMQVLENLRSIQ 371
              +    +N R+++
Sbjct:   360 RREITSKNQRTVE 372


>TIGR_CMR|CHY_0174 [details] [associations]
            symbol:CHY_0174 "acetoin utilization protein AcuC"
            species:246194 "Carboxydothermus hydrogenoformans Z-2901"
            [GO:0003674 "molecular_function" evidence=ND] [GO:0006091
            "generation of precursor metabolites and energy" evidence=ISS]
            [GO:0045150 "acetoin catabolic process" evidence=ISS]
            InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
            EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006091 GO:GO:0045150
            eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:YP_359046.1 STRING:Q3AFN8
            GeneID:3726493 KEGG:chy:CHY_0174 PATRIC:21273533
            HOGENOM:HOG000225181 KO:K04768 OMA:CDGRWIA
            BioCyc:CHYD246194:GJCN-175-MONOMER Uniprot:Q3AFN8
        Length = 383

 Score = 437 (158.9 bits), Expect = 3.6e-41, P = 3.6e-41
 Identities = 111/373 (29%), Positives = 179/373 (47%)

Query:     6 KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
             K    Y  D  S     +HP+ P R  +   L+   ++ K+ EI  P  A   EL   H 
Sbjct:     4 KAYLIYSDDYLSYRLAEDHPLNPQRYALAVELMKIAEVLKEEEIIPPRSATLKELYLVHD 63

Query:    66 ADYVEFLHRITPDTQHLFRQELTKYNLG-EDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
               YVE +  ++ + +++     +++ LG ED PVF  + E   + AGG+   A  +    
Sbjct:    64 PAYVEAVMNLSKNPENV---NGSRFGLGSEDNPVFSGMHEAAALVAGGSALGAELIYEGE 120

Query:   125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
              D   N AGGLHHA +  ASGFC  NDL + I +  +   +V Y+D+D HHGDGV+  FY
Sbjct:   121 ADHVFNIAGGLHHALRDAASGFCIYNDLAVAIAKFREKGLKVAYVDLDAHHGDGVQWLFY 180

Query:   185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
                 V+T+S H+ G   FPGTG + E+GE       IN+PL+   +D S+    + I+ +
Sbjct:   181 SDPGVLTISIHETGRYLFPGTGSITELGEGAAYGTKINIPLEPYTEDDSWLWALEEIVPE 240

Query:   245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPL-----LVTGGGG 299
             ++  + P  +V Q G DS   D L     +     E  + + +    +     L  GGGG
Sbjct:   241 LIRKFKPDILVTQHGCDSHRFDPLTHLANTTLAFQESAKLLHELAHEVCGGRWLAGGGGG 300

Query:   300 YTKENVA-RCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLST 358
             Y    V  R WT+    + +  LP ++P   + KY + +  + +P   ++  +S   L  
Sbjct:   301 YDYWRVVPRAWTIVWAEMTERSLPYDVPATFWRKYES-KAGVFLPRTFLDEGSSGIPLGR 359

Query:   359 IKMQVLENLRSIQ 371
              +    +N R+++
Sbjct:   360 RREITSKNQRTVE 372


>UNIPROTKB|Q81KS2 [details] [associations]
            symbol:acuC "Acetoin utilization protein AcuC" species:1392
            "Bacillus anthracis" [GO:0003674 "molecular_function" evidence=ND]
            InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286
            EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0045149
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 HSSP:O67135 HOGENOM:HOG000225181 KO:K04768
            OMA:CDGRWIA RefSeq:NP_847116.1 RefSeq:YP_021561.1
            RefSeq:YP_030810.1 ProteinModelPortal:Q81KS2 IntAct:Q81KS2
            DNASU:1086757 EnsemblBacteria:EBBACT00000011277
            EnsemblBacteria:EBBACT00000017721 EnsemblBacteria:EBBACT00000022816
            GeneID:1086757 GeneID:2819970 GeneID:2850479 KEGG:ban:BA_4918
            KEGG:bar:GBAA_4918 KEGG:bat:BAS4563 ProtClustDB:CLSK873548
            BioCyc:BANT260799:GJAJ-4620-MONOMER
            BioCyc:BANT261594:GJ7F-4777-MONOMER Uniprot:Q81KS2
        Length = 388

 Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
 Identities = 103/312 (33%), Positives = 153/312 (49%)

Query:     8 SYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSAD 67
             ++ Y  D     F P+HP    R+ +T+ L+         +I  P  A   E+A  H+ +
Sbjct:     4 AFIYSDDFRGYSFSPDHPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYIHTEE 63

Query:    68 YVEFLHRITPDTQHLFRQELTKYNLG-EDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
             Y+  + R       L +     Y LG ED P+F N+ E   +  GGT+ A   + +    
Sbjct:    64 YINAVKRAGEGK--LEKSIAMTYGLGTEDTPMFPNMHEASALLVGGTLTAVDAVLSGKVK 121

Query:   127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLK-YHARVLYIDIDVHHGDGVEEAFYF 185
              A+N  GGLHH  + +ASGFC  ND  + +  + K Y  RVLYID D HHGDGV+ +FY 
Sbjct:   122 HALNLGGGLHHGFRGKASGFCIYNDSSIAMKYIQKKYGLRVLYIDTDAHHGDGVQWSFYD 181

Query:   186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
                V T+S H+ G   FPGTG V E G+  G  Y+ NVPL    +D SF   ++T++ +V
Sbjct:   182 DPNVCTISLHETGRYLFPGTGAVNERGQGNGYSYSFNVPLDAFTEDESFLDSYRTVVKEV 241

Query:   246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPL-----LVTGGGGY 300
                + P  I+ Q GAD+   D L     +++ + E  +  ++          +  GGGGY
Sbjct:   242 AAYFKPDIILTQNGADAHYYDPLTHLCATMNIYREIPKLAREIANEYCEGRWIAVGGGGY 301

Query:   301 TKENVA-RCWTV 311
                 V  R W +
Sbjct:   302 DHWRVVPRAWAL 313


>TIGR_CMR|BA_4918 [details] [associations]
            symbol:BA_4918 "acetoin utilization protein AcuC"
            species:198094 "Bacillus anthracis str. Ames" [GO:0003674
            "molecular_function" evidence=ND] [GO:0006091 "generation of
            precursor metabolites and energy" evidence=ISS] InterPro:IPR003085
            PRINTS:PR01272 Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE016879
            EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0045149
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 HSSP:O67135 HOGENOM:HOG000225181 KO:K04768
            OMA:CDGRWIA RefSeq:NP_847116.1 RefSeq:YP_021561.1
            RefSeq:YP_030810.1 ProteinModelPortal:Q81KS2 IntAct:Q81KS2
            DNASU:1086757 EnsemblBacteria:EBBACT00000011277
            EnsemblBacteria:EBBACT00000017721 EnsemblBacteria:EBBACT00000022816
            GeneID:1086757 GeneID:2819970 GeneID:2850479 KEGG:ban:BA_4918
            KEGG:bar:GBAA_4918 KEGG:bat:BAS4563 ProtClustDB:CLSK873548
            BioCyc:BANT260799:GJAJ-4620-MONOMER
            BioCyc:BANT261594:GJ7F-4777-MONOMER Uniprot:Q81KS2
        Length = 388

 Score = 430 (156.4 bits), Expect = 2.0e-40, P = 2.0e-40
 Identities = 103/312 (33%), Positives = 153/312 (49%)

Query:     8 SYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSAD 67
             ++ Y  D     F P+HP    R+ +T+ L+         +I  P  A   E+A  H+ +
Sbjct:     4 AFIYSDDFRGYSFSPDHPFNQLRVTLTYDLLQKGGFISPSQIISPRMATDEEIAYIHTEE 63

Query:    68 YVEFLHRITPDTQHLFRQELTKYNLG-EDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
             Y+  + R       L +     Y LG ED P+F N+ E   +  GGT+ A   + +    
Sbjct:    64 YINAVKRAGEGK--LEKSIAMTYGLGTEDTPMFPNMHEASALLVGGTLTAVDAVLSGKVK 121

Query:   127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLK-YHARVLYIDIDVHHGDGVEEAFYF 185
              A+N  GGLHH  + +ASGFC  ND  + +  + K Y  RVLYID D HHGDGV+ +FY 
Sbjct:   122 HALNLGGGLHHGFRGKASGFCIYNDSSIAMKYIQKKYGLRVLYIDTDAHHGDGVQWSFYD 181

Query:   186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
                V T+S H+ G   FPGTG V E G+  G  Y+ NVPL    +D SF   ++T++ +V
Sbjct:   182 DPNVCTISLHETGRYLFPGTGAVNERGQGNGYSYSFNVPLDAFTEDESFLDSYRTVVKEV 241

Query:   246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPL-----LVTGGGGY 300
                + P  I+ Q GAD+   D L     +++ + E  +  ++          +  GGGGY
Sbjct:   242 AAYFKPDIILTQNGADAHYYDPLTHLCATMNIYREIPKLAREIANEYCEGRWIAVGGGGY 301

Query:   301 TKENVA-RCWTV 311
                 V  R W +
Sbjct:   302 DHWRVVPRAWAL 313


>UNIPROTKB|B4DQE7 [details] [associations]
            symbol:HDAC8 "cDNA FLJ58211, highly similar to Histone
            deacetylase 8" species:9606 "Homo sapiens" [GO:0004407 "histone
            deacetylase activity" evidence=IEA] InterPro:IPR003084
            PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0004407 EMBL:AL133500
            EMBL:BX295542 UniGene:Hs.310536 HGNC:HGNC:13315 ChiTaRS:HDAC8
            EMBL:AK298767 IPI:IPI00940536 SMR:B4DQE7 STRING:B4DQE7
            Ensembl:ENST00000429103 Uniprot:B4DQE7
        Length = 182

 Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
 Identities = 69/181 (38%), Positives = 115/181 (63%)

Query:   190 MTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETY 249
             MTVS HKF   FFPGTGDV ++G  +G++Y++NVP++DGI D  + ++ ++++ +V + +
Sbjct:     1 MTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAF 60

Query:   250 APGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCW 309
              P A+VLQ GAD++AGD +  FN++  G  +C++++ ++ L  L+ GGGGY   N ARCW
Sbjct:    61 NPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCW 120

Query:   310 TVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRS 369
             T  TG++L   L +EIP++E+   + P+  L I      + N    +  I   +  NL+ 
Sbjct:   121 TYLTGVILGKTLSSEIPDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKH 180

Query:   370 I 370
             +
Sbjct:   181 V 181


>TIGR_CMR|SPO_2177 [details] [associations]
            symbol:SPO_2177 "acetoin utilization protein AcuC"
            species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824 "catalytic
            activity" evidence=ISS] [GO:0045150 "acetoin catabolic process"
            evidence=ISS] InterPro:IPR003085 PRINTS:PR01272 Pfam:PF00850
            INTERPRO:IPR000286 EMBL:CP000031 GenomeReviews:CP000031_GR
            GO:GO:0045149 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225181 KO:K04768
            RefSeq:YP_167402.1 ProteinModelPortal:Q5LRF3 GeneID:3193192
            KEGG:sil:SPO2177 PATRIC:23377701 OMA:HFRRVLY ProtClustDB:CLSK933788
            Uniprot:Q5LRF3
        Length = 368

 Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
 Identities = 102/309 (33%), Positives = 152/309 (49%)

Query:    20 FGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDT 79
             +G  HP+   R+     L  +       +     +A P  L  FH+ DY+  L +   + 
Sbjct:    13 YGAVHPLAIPRVSTVIDLCRAMGWFAPGQYRTSPRARPAALRAFHTPDYIAALQQAEAE- 71

Query:    80 QHLFRQELTKYNLGE-DCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHA 138
             Q +  +   ++ LG    PVF  ++      AGG++ AA  +         N  GG HH 
Sbjct:    72 QAVSEETRARHGLGTLPNPVFAEMYRRPATAAGGSLLAAELVARG--HRVFNPGGGTHHG 129

Query:   139 KKCEASGFCYINDLVLGILELLKYH-ARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKF 197
                 A GFCY+ND VL IL L +   ARV Y+DID HH DGV  AF  +  V  +S H+ 
Sbjct:   130 FADRAGGFCYLNDPVLAILALQRLGCARVAYVDIDAHHCDGVASAFQGSQTVRMISIHEA 189

Query:   198 GDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQ 257
                 +P TG +++  +  G   A+N+P+   ++D+++  +   +I   V  + P A+VLQ
Sbjct:   190 RR--WPFTGALED--DAGGA--ALNLPVARDLNDSAYALILDRLILPAVAGFRPDAVVLQ 243

Query:   258 CGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILL 317
             CGAD++A D L    LS   H + VR +      LLV GGGGY   +VAR WT     L 
Sbjct:   244 CGADAVAEDPLSRLALSNCAHRDTVRALAALCPRLLVLGGGGYNPWSVARAWTGVWATLS 303

Query:   318 DTELPNEIP 326
               E+P+ +P
Sbjct:   304 GAEIPDRLP 312


>UNIPROTKB|E7EWI8 [details] [associations]
            symbol:HDAC3 "Histone deacetylase 3" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            EMBL:AC008781 GO:GO:0004407 HGNC:HGNC:4854 ChiTaRS:HDAC3
            IPI:IPI00930193 ProteinModelPortal:E7EWI8 SMR:E7EWI8
            Ensembl:ENST00000523353 ArrayExpress:E7EWI8 Bgee:E7EWI8
            Uniprot:E7EWI8
        Length = 128

 Score = 207 (77.9 bits), Expect = 4.1e-35, Sum P(2) = 4.1e-35
 Identities = 34/66 (51%), Positives = 50/66 (75%)

Query:     7 ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
             ++YFYD DVG+ ++G  HPMKPHRL +TH LVL Y L+KKM +++P++A   ++ +FHS 
Sbjct:     5 VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64

Query:    67 DYVEFL 72
             DY + L
Sbjct:    65 DYTDSL 70

 Score = 201 (75.8 bits), Expect = 4.1e-35, Sum P(2) = 4.1e-35
 Identities = 40/64 (62%), Positives = 46/64 (71%)

Query:   261 DSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTE 320
             DSL  DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT  NVA   T ET +L++  
Sbjct:    68 DSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA---TYETSLLVEEA 124

Query:   321 LPNE 324
             +  E
Sbjct:   125 ISEE 128


>UNIPROTKB|E7EW22 [details] [associations]
            symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 GO:GO:0004407 EMBL:AL133500 EMBL:BX295542
            HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI00940139
            ProteinModelPortal:E7EW22 SMR:E7EW22 Ensembl:ENST00000436675
            ArrayExpress:E7EW22 Bgee:E7EW22 Uniprot:E7EW22
        Length = 185

 Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
 Identities = 71/152 (46%), Positives = 98/152 (64%)

Query:    28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITP--DTQHLFRQ 85
             P R  M H L+ +Y LHK+M I +P  A   E+A FH+  Y++ L +++   D  H    
Sbjct:    35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDH---P 91

Query:    86 ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
             +  +Y LG DCP  E +F++     G TI AA+ L + +C +AINW+GG HHAKK EASG
Sbjct:    92 DSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASG 151

Query:   146 FCYINDLVLGILELLKYHARVLYIDIDVHHGD 177
             FCY+ND VLGIL L +   R+LY+D+D+HHGD
Sbjct:   152 FCYLNDAVLGILRLRRKFERILYVDLDLHHGD 183


>UNIPROTKB|F1N0W0 [details] [associations]
            symbol:HDAC3 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0046329
            "negative regulation of JNK cascade" evidence=IEA] [GO:0042826
            "histone deacetylase binding" evidence=IEA] [GO:0040014 "regulation
            of multicellular organism growth" evidence=IEA] [GO:0033558
            "protein deacetylase activity" evidence=IEA] [GO:0032922 "circadian
            regulation of gene expression" evidence=IEA] [GO:0031490 "chromatin
            DNA binding" evidence=IEA] [GO:0017053 "transcriptional repressor
            complex" evidence=IEA] [GO:0016575 "histone deacetylation"
            evidence=IEA] [GO:0007346 "regulation of mitotic cell cycle"
            evidence=IEA] [GO:0005876 "spindle microtubule" evidence=IEA]
            [GO:0003714 "transcription corepressor activity" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] INTERPRO:IPR000286
            GO:GO:0007346 GO:GO:0017053 GO:GO:0003714 GO:GO:0051225
            GO:GO:0040014 GO:GO:0000122 GO:GO:0032922 GO:GO:0046329
            GO:GO:0031490 GO:GO:0005876 GO:GO:0016575 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 OMA:GGECVEY
            GeneTree:ENSGT00530000062889 GO:GO:0033558 EMBL:DAAA02020441
            EMBL:DAAA02020442 IPI:IPI00688242 Ensembl:ENSBTAT00000023086
            Uniprot:F1N0W0
        Length = 163

 Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
 Identities = 72/159 (45%), Positives = 101/159 (63%)

Query:   269 GCFNLSIDGHA-ECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPE 327
             GC+     G   ECV +VK FN+PLLV GGGGYT  NVARCWT ET +L++  +  E+P 
Sbjct:     1 GCWGQRDRGRGGECVEYVKSFNIPLLVLGGGGYTVRNVARCWTYETSLLVEEAISEELPY 60

Query:   328 NEYIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFY 386
             +EY +YFAP+ +L    +  IEN NS+ YL  I+  + ENL+ + HAPSVQ+ +VP D  
Sbjct:    61 SEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFENLKMLNHAPSVQIHDVPADLL 120

Query:   387 IPEFDE-DEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 424
                +D  DE + +ER  +    +  +  +EFY+GD+DND
Sbjct:   121 T--YDRTDEADAEERGPEENYSRP-EAPNEFYDGDHDND 156


>UNIPROTKB|F1RPM1 [details] [associations]
            symbol:LOC100625846 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0004407 "histone deacetylase activity"
            evidence=IEA] InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850
            INTERPRO:IPR000286 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 GO:GO:0004407 GeneTree:ENSGT00530000062889
            EMBL:CU463320 Ensembl:ENSSSCT00000013570 Uniprot:F1RPM1
        Length = 142

 Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
 Identities = 62/142 (43%), Positives = 98/142 (69%)

Query:   190 MTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETY 249
             MTVS HKF   FFPGTGDV ++G  +G++Y++NVP++DGI D  +  + ++++ +V   +
Sbjct:     1 MTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYIAF 60

Query:   250 APGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG--GGYTKENVAR 307
              P A+VLQ GAD++AGD +  FN++  G  +C++++ ++ L  L+ GG  GGY   N AR
Sbjct:    61 NPKAVVLQLGADTIAGDPMCSFNMTPVGIGKCLKYILQWQLATLILGGETGGYNLANTAR 120

Query:   308 CWTVETGILLDTELPNEIPENE 329
             CWT  TG++L   L +EIP++E
Sbjct:   121 CWTYLTGVILGKTLSSEIPDHE 142


>UNIPROTKB|E5RG37 [details] [associations]
            symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
            chromatin" evidence=IEA] [GO:0000792 "heterochromatin"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005657
            "replication fork" evidence=IEA] [GO:0005667 "transcription factor
            complex" evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0009913 "epidermal cell
            differentiation" evidence=IEA] [GO:0010977 "negative regulation of
            neuron projection development" evidence=IEA] [GO:0016358 "dendrite
            development" evidence=IEA] [GO:0017053 "transcriptional repressor
            complex" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
            [GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
            "chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
            dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
            morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
            apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
            of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
            "positive regulation of sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
            formation" evidence=IEA] [GO:0061029 "eyelid development in
            camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
            formation" evidence=IEA] [GO:0090090 "negative regulation of
            canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
            "regulation of protein deacetylation" evidence=IEA]
            InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
            GO:GO:0016358 GO:GO:0003700 GO:GO:0005667 GO:GO:0000122
            GO:GO:0000790 GO:GO:0048714 GO:GO:0042475 GO:GO:0090090
            GO:GO:0042733 GO:GO:0061029 GO:GO:0031490 GO:GO:0009913
            GO:GO:0000792 GO:GO:0005657 GO:GO:0060789 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0010977 GO:GO:0061198
            GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
            IPI:IPI00976554 ProteinModelPortal:E5RG37 SMR:E5RG37
            Ensembl:ENST00000523628 ArrayExpress:E5RG37 Bgee:E5RG37
            Uniprot:E5RG37
        Length = 103

 Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
 Identities = 53/103 (51%), Positives = 78/103 (75%)

Query:    26 MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
             MKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS +Y++FL  I PD    + +
Sbjct:     1 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSK 60

Query:    86 ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIA 128
             ++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q  D+A
Sbjct:    61 QMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQQTDMA 103


>UNIPROTKB|E5RH52 [details] [associations]
            symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
            chromatin" evidence=IEA] [GO:0000792 "heterochromatin"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005657
            "replication fork" evidence=IEA] [GO:0005667 "transcription factor
            complex" evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0009913 "epidermal cell
            differentiation" evidence=IEA] [GO:0010977 "negative regulation of
            neuron projection development" evidence=IEA] [GO:0016358 "dendrite
            development" evidence=IEA] [GO:0017053 "transcriptional repressor
            complex" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
            [GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
            "chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
            dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
            morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
            apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
            of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
            "positive regulation of sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
            formation" evidence=IEA] [GO:0061029 "eyelid development in
            camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
            formation" evidence=IEA] [GO:0090090 "negative regulation of
            canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
            "regulation of protein deacetylation" evidence=IEA]
            InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
            GO:GO:0016358 GO:GO:0003700 GO:GO:0005667 GO:GO:0000122
            GO:GO:0000790 GO:GO:0048714 GO:GO:0042475 GO:GO:0090090
            GO:GO:0042733 GO:GO:0061029 GO:GO:0031490 GO:GO:0009913
            GO:GO:0000792 GO:GO:0005657 GO:GO:0060789 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0010977 GO:GO:0061198
            GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
            IPI:IPI00980006 ProteinModelPortal:E5RH52 SMR:E5RH52
            Ensembl:ENST00000521610 ArrayExpress:E5RH52 Bgee:E5RH52
            Uniprot:E5RH52
        Length = 100

 Score = 307 (113.1 bits), Expect = 2.2e-27, P = 2.2e-27
 Identities = 51/98 (52%), Positives = 75/98 (76%)

Query:    26 MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
             MKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS +Y++FL  I PD    + +
Sbjct:     1 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSK 60

Query:    86 ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
             ++ ++N+GEDCPVF+ LFEFCQ+  GG++  A +LN Q
Sbjct:    61 QMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 98


>UNIPROTKB|C9J8F0 [details] [associations]
            symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            HOGENOM:HOG000225180 GO:GO:0004407 EMBL:AL133500 EMBL:BX295542
            HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI00878343
            ProteinModelPortal:C9J8F0 SMR:C9J8F0 STRING:C9J8F0 PRIDE:C9J8F0
            Ensembl:ENST00000421523 BindingDB:C9J8F0 ArrayExpress:C9J8F0
            Bgee:C9J8F0 Uniprot:C9J8F0
        Length = 132

 Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
 Identities = 61/135 (45%), Positives = 84/135 (62%)

Query:    33 MTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITP--DTQHLFRQELTKY 90
             M H L+ +Y LHK+M I +P  A   E+A FH+  Y++ L +++   D  H    +  +Y
Sbjct:     1 MVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDH---PDSIEY 57

Query:    91 NLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYIN 150
              LG DCP  E +F++     G TI AA+ L + +C +AINW+GG HHAKK EASGFCY+N
Sbjct:    58 GLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFCYLN 117

Query:   151 DLVLGILELLKYHAR 165
             D VLGIL L +   R
Sbjct:   118 DAVLGILRLRRKFER 132


>UNIPROTKB|E5RFP9 [details] [associations]
            symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
            IPI:IPI00974336 ProteinModelPortal:E5RFP9 SMR:E5RFP9
            Ensembl:ENST00000521163 ArrayExpress:E5RFP9 Bgee:E5RFP9
            Uniprot:E5RFP9
        Length = 109

 Score = 292 (107.8 bits), Expect = 8.4e-26, P = 8.4e-26
 Identities = 49/101 (48%), Positives = 73/101 (72%)

Query:     4 KDKISYFYD-------GDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAY 56
             K K+ Y+YD       GD+G+ Y+G  HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA 
Sbjct:     9 KKKVCYYYDVCVFSILGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKAT 68

Query:    57 PVELAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCP 97
               E+ ++HS +Y++FL  I PD    + +++ ++N+GEDCP
Sbjct:    69 AEEMTKYHSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCP 109


>CGD|CAL0003359 [details] [associations]
            symbol:HDA1 species:5476 "Candida albicans" [GO:0004407
            "histone deacetylase activity" evidence=IEA;ISS] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=IMP] [GO:0036166 "phenotypic switching" evidence=IMP]
            [GO:0033553 "rDNA heterochromatin" evidence=IEA] [GO:0031934
            "mating-type region heterochromatin" evidence=IEA] [GO:0031933
            "telomeric heterochromatin" evidence=IEA] [GO:0030874 "nucleolar
            chromatin" evidence=IEA] [GO:0070823 "HDA1 complex" evidence=IEA]
            [GO:0016581 "NuRD complex" evidence=IEA] [GO:0005721 "centromeric
            heterochromatin" evidence=IEA] [GO:0030447 "filamentous growth"
            evidence=IMP] [GO:0009267 "cellular response to starvation"
            evidence=IMP] [GO:0036170 "filamentous growth of a population of
            unicellular organisms in response to starvation" evidence=IMP]
            [GO:1900436 "positive regulation of filamentous growth of a
            population of unicellular organisms in response to starvation"
            evidence=IMP] [GO:0036177 "filamentous growth of a population of
            unicellular organisms in response to pH" evidence=IMP] [GO:1900743
            "positive regulation of filamentous growth of a population of
            unicellular organisms in response to pH" evidence=IMP] [GO:0071469
            "cellular response to alkalinity" evidence=IMP] [GO:0036180
            "filamentous growth of a population of unicellular organisms in
            response to biotic stimulus" evidence=IMP] [GO:1900445 "positive
            regulation of filamentous growth of a population of unicellular
            organisms in response to biotic stimulus" evidence=IMP] [GO:0071216
            "cellular response to biotic stimulus" evidence=IMP] [GO:0030466
            "chromatin silencing at silent mating-type cassette" evidence=IEA]
            [GO:0034401 "regulation of transcription by chromatin organization"
            evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
            [GO:0010978 "gene silencing involved in chronological cell aging"
            evidence=IEA] [GO:0006348 "chromatin silencing at telomere"
            evidence=IEA] [GO:0030702 "chromatin silencing at centromere"
            evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0010621 "negative
            regulation of transcription by transcription factor localization"
            evidence=IEA] [GO:0031938 "regulation of chromatin silencing at
            telomere" evidence=IEA] [GO:0031060 "regulation of histone
            methylation" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0001308
            "negative regulation of chromatin silencing involved in replicative
            cell aging" evidence=IEA] [GO:0016575 "histone deacetylation"
            evidence=IEA] [GO:1900239 "regulation of phenotypic switching"
            evidence=IMP] [GO:0031078 "histone deacetylase activity (H3-K14
            specific)" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] CGD:CAL0003359 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0071216 GO:GO:0036180 GO:GO:1900445 GO:GO:0006357
            GO:GO:0071469 GO:GO:0009267 GO:GO:1900239 GO:GO:0036170
            InterPro:IPR019154 Pfam:PF09757 EMBL:AACQ01000044 EMBL:AACQ01000043
            GO:GO:0036177 eggNOG:COG0123 KO:K11407 Gene3D:3.40.800.20
            InterPro:IPR023801 InterPro:IPR017321 PANTHER:PTHR10625
            PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:1900436 GO:GO:0036166
            GO:GO:0004407 RefSeq:XP_718271.1 RefSeq:XP_718366.1
            ProteinModelPortal:Q5A960 STRING:Q5A960 GeneID:3639983
            GeneID:3640154 KEGG:cal:CaO19.10137 KEGG:cal:CaO19.2606
            GO:GO:1900743 Uniprot:Q5A960
        Length = 833

 Score = 310 (114.2 bits), Expect = 1.0e-25, P = 1.0e-25
 Identities = 83/285 (29%), Positives = 147/285 (51%)

Query:    59 ELAQFHSADYVEFLHRITPDTQHLFRQELTKYN-LGEDCPVFENLFEFCQIYAGGTIDAA 117
             E+ Q HS D+++F+      T+ + R +L K    G+   V  + +   ++  GGTI+A 
Sbjct:   191 EILQVHSEDHLKFIQ----STEDMSRDQLLKETETGDSIYVNNDSYLSAKLSCGGTIEAC 246

Query:   118 R-----RLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHA----RVLY 168
             +     R+ N L   AI    G HHA+    +GFC  +++ +    +LK +     R++ 
Sbjct:   247 KAVIEGRVKNSL---AIVRPPG-HHAEPNTPAGFCLFSNVAVAAKNMLKNYPESVRRIVI 302

Query:   169 IDIDVHHGDGVEEAFYFTDRVMTVSFHKFGD-LFFPGT--GDVKEIGEREGKFYAINVPL 225
             +D D+HHG+G ++AFY   RV+ +S H+F +  F+PGT  GD+ ++GE  G+ + IN+P 
Sbjct:   303 VDWDIHHGNGTQKAFYNDPRVLYISLHRFENGKFYPGTKYGDLNQVGEGPGEGFTINIPW 362

Query:   226 KD-GIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRF 284
             +  G+ D  +   F  II  V+  + P  I++  G D+  GD +G  +++  G+      
Sbjct:   363 RSSGMHDGDYVYAFNKIIQPVISEFDPDLIIVSSGFDAADGDVIGACHVTPAGYGYMTHT 422

Query:   285 VKKFNL-PLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPEN 328
             +K      L V   GGY  +++++     + + +   L  E PEN
Sbjct:   423 LKGIARGKLAVILEGGYNLDSISK-----SALAVAKVLVGEPPEN 462


>UNIPROTKB|Q5A960 [details] [associations]
            symbol:HDA1 "Likely class II histone deacetylase subunit
            Hda1p" species:237561 "Candida albicans SC5314" [GO:0004407
            "histone deacetylase activity" evidence=ISS] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=IMP] [GO:0009267 "cellular response to starvation"
            evidence=IMP] [GO:0016575 "histone deacetylation" evidence=ISS]
            [GO:0030447 "filamentous growth" evidence=IMP] [GO:0036166
            "phenotypic switching" evidence=IMP] [GO:0036170 "filamentous
            growth of a population of unicellular organisms in response to
            starvation" evidence=IMP] [GO:0036177 "filamentous growth of a
            population of unicellular organisms in response to pH"
            evidence=IMP] [GO:0036180 "filamentous growth of a population of
            unicellular organisms in response to biotic stimulus" evidence=IMP]
            [GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
            [GO:0071469 "cellular response to alkalinity" evidence=IMP]
            [GO:1900239 "regulation of phenotypic switching" evidence=IMP]
            [GO:1900436 "positive regulation of filamentous growth of a
            population of unicellular organisms in response to starvation"
            evidence=IMP] [GO:1900445 "positive regulation of filamentous
            growth of a population of unicellular organisms in response to
            biotic stimulus" evidence=IMP] [GO:1900743 "positive regulation of
            filamentous growth of a population of unicellular organisms in
            response to pH" evidence=IMP] CGD:CAL0003359 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0071216 GO:GO:0036180 GO:GO:1900445
            GO:GO:0006357 GO:GO:0071469 GO:GO:0009267 GO:GO:1900239
            GO:GO:0036170 InterPro:IPR019154 Pfam:PF09757 EMBL:AACQ01000044
            EMBL:AACQ01000043 GO:GO:0036177 eggNOG:COG0123 KO:K11407
            Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
            PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:1900436
            GO:GO:0036166 GO:GO:0004407 RefSeq:XP_718271.1 RefSeq:XP_718366.1
            ProteinModelPortal:Q5A960 STRING:Q5A960 GeneID:3639983
            GeneID:3640154 KEGG:cal:CaO19.10137 KEGG:cal:CaO19.2606
            GO:GO:1900743 Uniprot:Q5A960
        Length = 833

 Score = 310 (114.2 bits), Expect = 1.0e-25, P = 1.0e-25
 Identities = 83/285 (29%), Positives = 147/285 (51%)

Query:    59 ELAQFHSADYVEFLHRITPDTQHLFRQELTKYN-LGEDCPVFENLFEFCQIYAGGTIDAA 117
             E+ Q HS D+++F+      T+ + R +L K    G+   V  + +   ++  GGTI+A 
Sbjct:   191 EILQVHSEDHLKFIQ----STEDMSRDQLLKETETGDSIYVNNDSYLSAKLSCGGTIEAC 246

Query:   118 R-----RLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHA----RVLY 168
             +     R+ N L   AI    G HHA+    +GFC  +++ +    +LK +     R++ 
Sbjct:   247 KAVIEGRVKNSL---AIVRPPG-HHAEPNTPAGFCLFSNVAVAAKNMLKNYPESVRRIVI 302

Query:   169 IDIDVHHGDGVEEAFYFTDRVMTVSFHKFGD-LFFPGT--GDVKEIGEREGKFYAINVPL 225
             +D D+HHG+G ++AFY   RV+ +S H+F +  F+PGT  GD+ ++GE  G+ + IN+P 
Sbjct:   303 VDWDIHHGNGTQKAFYNDPRVLYISLHRFENGKFYPGTKYGDLNQVGEGPGEGFTINIPW 362

Query:   226 KD-GIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRF 284
             +  G+ D  +   F  II  V+  + P  I++  G D+  GD +G  +++  G+      
Sbjct:   363 RSSGMHDGDYVYAFNKIIQPVISEFDPDLIIVSSGFDAADGDVIGACHVTPAGYGYMTHT 422

Query:   285 VKKFNL-PLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPEN 328
             +K      L V   GGY  +++++     + + +   L  E PEN
Sbjct:   423 LKGIARGKLAVILEGGYNLDSISK-----SALAVAKVLVGEPPEN 462


>UNIPROTKB|E5RHE7 [details] [associations]
            symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
            chromatin" evidence=IEA] [GO:0000792 "heterochromatin"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005657
            "replication fork" evidence=IEA] [GO:0005667 "transcription factor
            complex" evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0009913 "epidermal cell
            differentiation" evidence=IEA] [GO:0010977 "negative regulation of
            neuron projection development" evidence=IEA] [GO:0016358 "dendrite
            development" evidence=IEA] [GO:0017053 "transcriptional repressor
            complex" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
            [GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
            "chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
            dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
            morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
            apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
            of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
            "positive regulation of sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
            formation" evidence=IEA] [GO:0061029 "eyelid development in
            camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
            formation" evidence=IEA] [GO:0090090 "negative regulation of
            canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
            "regulation of protein deacetylation" evidence=IEA]
            InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
            GO:GO:0016358 GO:GO:0003700 GO:GO:0005667 GO:GO:0000122
            GO:GO:0000790 GO:GO:0048714 GO:GO:0042475 GO:GO:0090090
            GO:GO:0042733 GO:GO:0061029 GO:GO:0031490 GO:GO:0009913
            GO:GO:0000792 GO:GO:0005657 GO:GO:0060789 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0010977 GO:GO:0061198
            GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
            IPI:IPI00979387 ProteinModelPortal:E5RHE7 SMR:E5RHE7
            Ensembl:ENST00000522371 ArrayExpress:E5RHE7 Bgee:E5RHE7
            Uniprot:E5RHE7
        Length = 86

 Score = 281 (104.0 bits), Expect = 1.8e-24, P = 1.8e-24
 Identities = 46/86 (53%), Positives = 67/86 (77%)

Query:    26 MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
             MKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS +Y++FL  I PD    + +
Sbjct:     1 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSK 60

Query:    86 ELTKYNLGEDCPVFENLFEFCQIYAG 111
             ++ ++N+GEDCPVF+ LFEFCQ+  G
Sbjct:    61 QMQRFNVGEDCPVFDGLFEFCQLSTG 86


>SGD|S000004966 [details] [associations]
            symbol:HDA1 "Putative catalytic subunit of the HDA1 histone
            deacetylase complex" species:4932 "Saccharomyces cerevisiae"
            [GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
            specific)" evidence=IEA] [GO:0031047 "gene silencing by RNA"
            evidence=IMP] [GO:0001308 "negative regulation of chromatin
            silencing involved in replicative cell aging" evidence=IGI;IMP]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
            [GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070933
            "histone H4 deacetylation" evidence=IEA] [GO:0097372 "NAD-dependent
            histone deacetylase activity (H3-K18 specific)" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IMP] [GO:0031938 "regulation of
            chromatin silencing at telomere" evidence=IMP] [GO:0016575 "histone
            deacetylation" evidence=IMP;IDA] [GO:0034401 "regulation of
            transcription by chromatin organization" evidence=IMP] [GO:0010621
            "negative regulation of transcription by transcription factor
            localization" evidence=IGI] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            [GO:0010978 "gene silencing involved in chronological cell aging"
            evidence=IGI;IMP] [GO:0070823 "HDA1 complex" evidence=IDA;IPI]
            [GO:0003682 "chromatin binding" evidence=IDA] [GO:0004407 "histone
            deacetylase activity" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0031078 "histone deacetylase activity (H3-K14 specific)"
            evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0032129 "histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0034739
            "histone deacetylase activity (H4-K16 specific)" evidence=IEA]
            [GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
            specific)" evidence=IEA] SGD:S000004966 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0045944 EMBL:BK006947 GO:GO:0003682
            GO:GO:0000122 GO:GO:0034401 GO:GO:0031047 InterPro:IPR019154
            Pfam:PF09757 GO:GO:0070932 GO:GO:0070933 GO:GO:0031938
            eggNOG:COG0123 HOGENOM:HOG000161343 KO:K11407 OMA:IDPHPED
            OrthoDB:EOG498Z80 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            InterPro:IPR017321 PANTHER:PTHR10625 PIRSF:PIRSF037919
            PRINTS:PR01270 GeneTree:ENSGT00530000062809 EMBL:Z71297 PIR:S62933
            RefSeq:NP_014377.1 ProteinModelPortal:P53973 SMR:P53973
            DIP:DIP-1360N IntAct:P53973 MINT:MINT-387448 STRING:P53973
            PaxDb:P53973 PeptideAtlas:P53973 EnsemblFungi:YNL021W GeneID:855710
            KEGG:sce:YNL021W CYGD:YNL021w NextBio:980058 Genevestigator:P53973
            GermOnline:YNL021W GO:GO:0070823 GO:GO:0010978 GO:GO:0001308
            GO:GO:0010621 Uniprot:P53973
        Length = 706

 Score = 285 (105.4 bits), Expect = 1.9e-22, P = 1.9e-22
 Identities = 78/287 (27%), Positives = 147/287 (51%)

Query:    59 ELAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFEN-LFEFCQIYAGGTIDAA 117
             E+ + H+ +++EF+      T+ + R+EL K     D   F N  +   ++  GG I+A 
Sbjct:   130 EILEVHTKEHLEFIE----STEKMSREELLKETEKGDSVYFNNDSYASARLPCGGAIEAC 185

Query:   118 R-----RLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHA----RVLY 168
             +     R+ N L    +   G  HHA+   A GFC  +++ +    +LK +     R++ 
Sbjct:   186 KAVVEGRVKNSLA--VVRPPG--HHAEPQAAGGFCLFSNVAVAAKNILKNYPESVRRIMI 241

Query:   169 IDIDVHHGDGVEEAFYFTDRVMTVSFHKFG-DLFFPGT--GDVKEIGEREGKFYAINV-- 223
             +D D+HHG+G +++FY  D+V+ VS H+F    ++PGT  G   + GE +G+ +  N+  
Sbjct:   242 LDWDIHHGNGTQKSFYQDDQVLYVSLHRFEMGKYYPGTIQGQYDQTGEGKGEGFNCNITW 301

Query:   224 PLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG-CF-NLSIDGH-AE 280
             P+  G+ D  +   F+ ++  +   + P  +++  G D+  GD +G C    S  GH   
Sbjct:   302 PV-GGVGDAEYMWAFEQVVMPMGREFKPDLVIISSGFDAADGDTIGQCHVTPSCYGHMTH 360

Query:   281 CVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPE 327
              ++ + + NL +++ GG  Y  + +AR       +L+  E P+E+P+
Sbjct:   361 MLKSLARGNLCVVLEGG--YNLDAIARSALSVAKVLIG-EPPDELPD 404


>ZFIN|ZDB-GENE-030131-3232 [details] [associations]
            symbol:hdac6 "histone deacetylase 6" species:7955
            "Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006476 "protein deacetylation" evidence=IGI] [GO:0001525
            "angiogenesis" evidence=IGI;IMP] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
            Pfam:PF00850 INTERPRO:IPR000286 ZFIN:ZDB-GENE-030131-3232
            GO:GO:0008270 GO:GO:0001525 GO:GO:0016787 Gene3D:3.30.40.10
            InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062809
            CTD:10013 GO:GO:0006476 EMBL:BX469901 IPI:IPI01023393
            RefSeq:XP_693858.4 UniGene:Dr.78784 PRIDE:F8W4B7
            Ensembl:ENSDART00000148993 GeneID:565482 KEGG:dre:565482
            NextBio:20885908 ArrayExpress:F8W4B7 Bgee:F8W4B7 Uniprot:F8W4B7
        Length = 1081

 Score = 279 (103.3 bits), Expect = 2.1e-21, P = 2.1e-21
 Identities = 86/320 (26%), Positives = 156/320 (48%)

Query:    23 NHPMKPHRLCMTHHLVLSYDLHKKMEIY-RPHK-----AYPVELAQFHSADYVEFLHRIT 76
             +HP  P R+         +  H+++ +  R H+     A   ELA  HS+ ++     I 
Sbjct:   462 HHPELPQRISRI------FSRHEELRLLSRCHRIPARLATEEELALCHSSKHIS----II 511

Query:    77 PDTQHLFRQELTKYNLGEDC-PVF-ENLFEFCQIYAGGT-IDAARR-LNNQLCD-IAINW 131
               ++H+  ++L +  LG++   +F  N    C + A G+  ++A+  L  Q+ + +AI  
Sbjct:   512 KSSEHMKPRDLNR--LGDEYNSIFISNESYTCALLAAGSCFNSAQAILTGQVRNAVAIVR 569

Query:   132 AGGLHHAKKCEASGFCYINDLVLGIL---ELLKYHARVLYIDIDVHHGDGVEEAFYFTDR 188
               G HHA+K  A GFC+ N   L       + +   RVL +D DVHHG+G +  F   D 
Sbjct:   570 PPG-HHAEKDTACGFCFFNTAALTARYAQSITRESLRVLIVDWDVHHGNGTQHIFEEDDS 628

Query:   189 VMTVSFHKFGD-LFFPGTGDVK--EIGEREGKFYAINVPLKDG-IDDTSFTRLFKTIISK 244
             V+ +S H++ D  FFP + D    ++G  +G+ Y +N+P   G + D  +   F  ++  
Sbjct:   629 VLYISLHRYEDGAFFPNSEDANYDKVGLGKGRGYNVNIPWNGGKMGDPEYMAAFHHLVMP 688

Query:   245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLP-LLVTGGGGYTKE 303
             +   +AP  +++  G D+  GD LG F ++ +G+A     +       +L+   GGY   
Sbjct:   689 IAREFAPELVLVSAGFDAARGDPLGGFQVTPEGYAHLTHQLMSLAAGRVLIILEGGYNLT 748

Query:   304 NVARCWTVETGILLDTELPN 323
             +++   ++ T +LL    P+
Sbjct:   749 SISESMSMCTSMLLGDSPPS 768

 Score = 225 (84.3 bits), Expect = 3.1e-15, P = 3.1e-15
 Identities = 79/316 (25%), Positives = 136/316 (43%)

Query:    23 NHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHL 82
             +HP  P R+     ++ +  L  +            EL   H+ +YVE +      TQ++
Sbjct:    81 SHPECPARVSTVMEMLETEGLLGRCVQVEARAVTEDELLLVHTKEYVELMK----STQNM 136

Query:    83 FRQEL-TKYNLGEDCPVFENLFEFCQIYAGGTIDAARR-LNNQLCD-IAINWAGGLHHAK 139
               +EL T     +   +    F    +  G  +    + + +QL +  +IN   G HHA+
Sbjct:   137 TEEELKTLAEKYDSVYLHPGFFSSACLSVGSVLQLVDKVMTSQLRNGFSINRPPG-HHAQ 195

Query:   140 KCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKF 197
               + +GFC  N+L +      K H   RVL +D DVHHG G++  F     V+  S H++
Sbjct:   196 ADKMNGFCMFNNLAIAARYAQKRHRVQRVLIVDWDVHHGQGIQYIFEEDPSVLYFSVHRY 255

Query:   198 GD-LFFPGT--GDVKEIGEREGKFYAINVPL-KDGIDDTSFTRLFKTIISKVVETYAPGA 253
              D  F+P     D   +G   G+ Y IN+P  K G++   +   F+ ++  V   + P  
Sbjct:   256 EDGSFWPHLKESDSSSVGSGAGQGYNINLPWNKVGMESGDYITAFQQLLLPVAYEFQPQL 315

Query:   254 IVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTG-GGGYTKENVARCWTVE 312
             +++  G D++ GD  G   +S +  +     +K      LV    GGY  ++ A      
Sbjct:   316 VLVAAGFDAVIGDPKGGMQVSPECFSILTHMLKGVAQGRLVLALEGGYNLQSTAEGVCAS 375

Query:   313 TGILLDTELPNEIPEN 328
                LL    P+ +P +
Sbjct:   376 MRSLLGDPCPH-LPSS 390


>RGD|619976 [details] [associations]
            symbol:Hdac2 "histone deacetylase 2" species:10116 "Rattus
            norvegicus" [GO:0000122 "negative regulation of transcription from
            RNA polymerase II promoter" evidence=ISO] [GO:0000785 "chromatin"
            evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=ISO]
            [GO:0000792 "heterochromatin" evidence=ISO] [GO:0001047 "core
            promoter binding" evidence=IDA] [GO:0001103 "RNA polymerase II
            repressing transcription factor binding" evidence=ISO] [GO:0003682
            "chromatin binding" evidence=ISO] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=ISO]
            [GO:0004407 "histone deacetylase activity" evidence=ISO;IMP]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005657 "replication fork" evidence=ISO]
            [GO:0005667 "transcription factor complex" evidence=ISO]
            [GO:0006344 "maintenance of chromatin silencing" evidence=ISO]
            [GO:0006476 "protein deacetylation" evidence=ISO] [GO:0008134
            "transcription factor binding" evidence=ISO] [GO:0008284 "positive
            regulation of cell proliferation" evidence=ISO] [GO:0009913
            "epidermal cell differentiation" evidence=ISO] [GO:0010870
            "positive regulation of receptor biosynthetic process"
            evidence=ISO] [GO:0010977 "negative regulation of neuron projection
            development" evidence=ISO;IMP] [GO:0016358 "dendrite development"
            evidence=ISO] [GO:0016575 "histone deacetylation" evidence=ISO;IMP]
            [GO:0016580 "Sin3 complex" evidence=ISO] [GO:0016581 "NuRD complex"
            evidence=ISO] [GO:0017053 "transcriptional repressor complex"
            evidence=ISO] [GO:0019899 "enzyme binding" evidence=ISO]
            [GO:0021766 "hippocampus development" evidence=ISO] [GO:0030182
            "neuron differentiation" evidence=ISO] [GO:0031072 "heat shock
            protein binding" evidence=IDA] [GO:0031490 "chromatin DNA binding"
            evidence=ISO] [GO:0033558 "protein deacetylase activity"
            evidence=ISO] [GO:0034605 "cellular response to heat" evidence=IEP]
            [GO:0035098 "ESC/E(Z) complex" evidence=ISO] [GO:0042220 "response
            to cocaine" evidence=IEP] [GO:0042475 "odontogenesis of
            dentin-containing tooth" evidence=ISO] [GO:0042493 "response to
            drug" evidence=IEP] [GO:0042733 "embryonic digit morphogenesis"
            evidence=ISO] [GO:0043066 "negative regulation of apoptotic
            process" evidence=ISO] [GO:0043433 "negative regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISO] [GO:0045862 "positive regulation of proteolysis"
            evidence=ISO] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISO;IMP] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=ISO]
            [GO:0048714 "positive regulation of oligodendrocyte
            differentiation" evidence=ISO] [GO:0051091 "positive regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=ISO] [GO:0051896 "regulation of protein kinase B signaling
            cascade" evidence=ISO] [GO:0055013 "cardiac muscle cell
            development" evidence=ISO] [GO:0060044 "negative regulation of
            cardiac muscle cell proliferation" evidence=ISO] [GO:0060297
            "regulation of sarcomere organization" evidence=ISO] [GO:0060789
            "hair follicle placode formation" evidence=ISO] [GO:0061029 "eyelid
            development in camera-type eye" evidence=ISO] [GO:0061198
            "fungiform papilla formation" evidence=ISO] [GO:0090090 "negative
            regulation of canonical Wnt receptor signaling pathway"
            evidence=ISO] [GO:0090311 "regulation of protein deacetylation"
            evidence=ISO] RGD:619976 GO:GO:0045892 Reactome:REACT_111984
            GO:GO:0005654 GO:GO:0034605 GO:GO:0042493 GO:GO:0042220
            GO:GO:0000785 GO:GO:0031072 eggNOG:COG0123 Gene3D:3.40.800.20
            InterPro:IPR023801 GO:GO:0010977 EMBL:AF321130 IPI:IPI00914263
            UniGene:Rn.1797 ProteinModelPortal:Q99PA1 DIP:DIP-46498N
            STRING:Q99PA1 PhosphoSite:Q99PA1 InParanoid:Q99PA1
            Genevestigator:Q99PA1 Uniprot:Q99PA1
        Length = 174

 Score = 254 (94.5 bits), Expect = 2.3e-21, P = 2.3e-21
 Identities = 46/114 (40%), Positives = 72/114 (63%)

Query:   312 ETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQ 371
             ET + LD E+PNE+P N+Y +YF P+  L I   ++ N N+  Y+  IK ++ ENLR + 
Sbjct:     2 ETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRLFENLRMLP 61

Query:   372 HAPSVQMQEVPPD-FYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 424
             HAP VQMQ +P D  +    DED ++PD+R+     DK+I  D+EF + +++ +
Sbjct:    62 HAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDEGE 115


>TAIR|locus:2095087 [details] [associations]
            symbol:HDA15 "AT3G18520" species:3702 "Arabidopsis
            thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0016575 "histone deacetylation" evidence=ISS] [GO:0009294 "DNA
            mediated transformation" evidence=IMP] [GO:0048573 "photoperiodism,
            flowering" evidence=RCA] InterPro:IPR001876 PROSITE:PS01358
            Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP002686 GO:GO:0008270
            GO:GO:0005622 GO:GO:0016787 GO:GO:0009294 KO:K11407
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 IPI:IPI00533902 RefSeq:NP_850609.2 UniGene:At.38541
            ProteinModelPortal:F4J8S1 SMR:F4J8S1 PRIDE:F4J8S1
            EnsemblPlants:AT3G18520.2 GeneID:821382 KEGG:ath:AT3G18520
            OMA:QNKSVLY Uniprot:F4J8S1
        Length = 564

 Score = 271 (100.5 bits), Expect = 5.1e-21, P = 5.1e-21
 Identities = 60/195 (30%), Positives = 98/195 (50%)

Query:   136 HHAKKCEASGFCYINDLVLGILELLKYHAR-VLYIDIDVHHGDGVEEAFYFTDRVMTVSF 194
             HHA    A GFC  N+  +  L      A+ VL +D DVHHG+G +E F     V+ +S 
Sbjct:   276 HHAGVRHAMGFCLHNNAAVAALVAQAAGAKKVLIVDWDVHHGNGTQEIFEQNKSVLYISL 335

Query:   195 HKF-GDLFFPGTGDVKEIGEREGKFYAINVPLK-DGIDDTSFTRLFKTIISKVVETYAPG 252
             H+  G  F+PGTG   E+G   G+ Y +NVP    G+ D  +   F+ ++  +   ++P 
Sbjct:   336 HRHEGGNFYPGTGAADEVGSNGGEGYCVNVPWSCGGVGDKDYIFAFQHVVLPIASAFSPD 395

Query:   253 AIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF-NLPLLVTGGGGYTKENVARCWTV 311
              +++  G D+  GD LGC +++  G++   + +       +LV   GGY   +++   T 
Sbjct:   396 FVIISAGFDAARGDPLGCCDVTPAGYSRMTQMLGDLCGGKMLVILEGGYNLRSISASATA 455

Query:   312 ETGILLDTELPNEIP 326
                +LL     NE+P
Sbjct:   456 VIKVLLGENPENELP 470


>TAIR|locus:2201826 [details] [associations]
            symbol:HDA08 "AT1G08460" species:3702 "Arabidopsis
            thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISM] [GO:0016575 "histone
            deacetylation" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0006355
            GO:GO:0006351 EMBL:AC006932 GO:GO:0070932 GO:GO:0070933
            eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 EMBL:AF510167
            EMBL:AF410272 EMBL:AF428369 EMBL:AY097371 IPI:IPI00548930
            PIR:G86217 RefSeq:NP_563817.1 UniGene:At.26246
            ProteinModelPortal:Q94EJ2 SMR:Q94EJ2 STRING:Q94EJ2 PaxDb:Q94EJ2
            PRIDE:Q94EJ2 EnsemblPlants:AT1G08460.1 GeneID:837366
            KEGG:ath:AT1G08460 TAIR:At1g08460 InParanoid:Q94EJ2 OMA:HNANSTI
            PhylomeDB:Q94EJ2 ProtClustDB:CLSN2687728 Genevestigator:Q94EJ2
            Uniprot:Q94EJ2
        Length = 377

 Score = 257 (95.5 bits), Expect = 2.9e-20, P = 2.9e-20
 Identities = 80/269 (29%), Positives = 127/269 (47%)

Query:    59 ELAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLF------EFCQIYAGG 112
             EL  FH+++Y+E L  +  D              GE C +    F      E   + AG 
Sbjct:    74 ELLMFHTSEYIEKL--VEADKS------------GERCEIAAGTFMSPGSWEAALLAAGT 119

Query:   113 TIDAARRL---NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHA--RVL 167
             T+ A + +   + ++    +   G  HH++  +A G+C++N+  L +   L   +  RV 
Sbjct:   120 TLSAMQHILDCHGKIAYALVRPPG--HHSQPTQADGYCFLNNAALAVKLALNSGSCSRVA 177

Query:   168 YIDIDVHHGDGVEEAFYFTDRVMTVSFH-KFGDL--FFPGTGDVKEIGEREGKFYAINVP 224
              IDIDVH+G+G  E FY +D+V+TVS H   G      P  G + E+GE  G  Y +NVP
Sbjct:   178 VIDIDVHYGNGTAEGFYTSDKVLTVSLHMNHGSWGSSHPQKGSIDELGEDVGLGYNLNVP 237

Query:   225 LKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGH---AEC 281
             L +G  D  +      ++   V  + P  +VL  G DS A D  G  +L+++G+    + 
Sbjct:   238 LPNGTGDRGYEYAMNELVVPAVRRFGPDMVVLVVGQDSSAFDPNGRQSLTMNGYRRIGQI 297

Query:   282 VRFVKKFNLP--LLVTGGGGYTKENVARC 308
             +R V + +    LL+   GGY     A C
Sbjct:   298 MRGVAEEHSHGRLLMVQEGGYHVTYAAYC 326


>UNIPROTKB|A6NGT0 [details] [associations]
            symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            HOGENOM:HOG000225180 GO:GO:0004407 HOVERGEN:HBG057112 EMBL:AL133500
            EMBL:BX295542 HGNC:HGNC:13315 ChiTaRS:HDAC8 IPI:IPI00642981
            ProteinModelPortal:A6NGT0 SMR:A6NGT0 STRING:A6NGT0
            Ensembl:ENST00000373560 ArrayExpress:A6NGT0 Bgee:A6NGT0
            Uniprot:A6NGT0
        Length = 156

 Score = 240 (89.5 bits), Expect = 8.4e-20, P = 8.4e-20
 Identities = 48/117 (41%), Positives = 69/117 (58%)

Query:    28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITP--DTQHLFRQ 85
             P R  M H L+ +Y LHK+M I +P  A   E+A FH+  Y++ L +++   D  H    
Sbjct:    35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDH---P 91

Query:    86 ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCE 142
             +  +Y LG DCP  E +F++     G TI AA+ L + +C +AINW+GG HHAKK E
Sbjct:    92 DSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKYE 148


>POMBASE|SPBC800.03 [details] [associations]
            symbol:clr3 "histone deacetylase (class II) Clr3"
            species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IGI;IMP] [GO:0000183 "chromatin silencing at rDNA"
            evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
            [GO:0004407 "histone deacetylase activity" evidence=IMP;IDA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0005721 "centromeric
            heterochromatin" evidence=IDA] [GO:0006348 "chromatin silencing at
            telomere" evidence=IMP] [GO:0016575 "histone deacetylation"
            evidence=IMP] [GO:0016584 "nucleosome positioning" evidence=IMP]
            [GO:0030466 "chromatin silencing at silent mating-type cassette"
            evidence=IMP] [GO:0030702 "chromatin silencing at centromere"
            evidence=IMP] [GO:0030874 "nucleolar chromatin" evidence=IDA]
            [GO:0031060 "regulation of histone methylation" evidence=IMP]
            [GO:0031078 "histone deacetylase activity (H3-K14 specific)"
            evidence=IMP] [GO:0031933 "telomeric heterochromatin" evidence=IDA]
            [GO:0031934 "mating-type region heterochromatin" evidence=IDA]
            [GO:0033553 "rDNA heterochromatin" evidence=IDA] [GO:0035391
            "maintenance of chromatin silencing at silent mating-type cassette"
            evidence=NAS] [GO:0070824 "SHREC complex" evidence=IDA] [GO:0071276
            "cellular response to cadmium ion" evidence=IMP] [GO:0071585
            "detoxification of cadmium ion" evidence=IMP] PomBase:SPBC800.03
            Pfam:PF00850 INTERPRO:IPR000286 EMBL:CU329671 GO:GO:0071276
            GO:GO:0071585 GO:GO:0006351 GenomeReviews:CU329671_GR GO:GO:0000122
            GO:GO:0030702 GO:GO:0000183 GO:GO:0006348 GO:GO:0005721
            GO:GO:0031934 InterPro:IPR019154 Pfam:PF09757 GO:GO:0016584
            GO:GO:0033553 GO:GO:0070933 GO:GO:0016581 GO:GO:0031933
            GO:GO:0030874 GO:GO:0031060 EMBL:AF064207 PIR:T43797
            RefSeq:NP_595104.1 ProteinModelPortal:P56523 DIP:DIP-59446N
            STRING:P56523 EnsemblFungi:SPBC800.03.1 GeneID:2540821
            KEGG:spo:SPBC800.03 eggNOG:COG0123 HOGENOM:HOG000161343 KO:K11407
            OMA:IDPHPED OrthoDB:EOG498Z80 NextBio:20801938 GO:GO:0031078
            GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            GO:GO:0035391 Gene3D:3.40.800.20 InterPro:IPR023801
            InterPro:IPR017321 PANTHER:PTHR10625 PIRSF:PIRSF037919
            PRINTS:PR01270 Uniprot:P56523
        Length = 687

 Score = 260 (96.6 bits), Expect = 1.6e-19, P = 1.6e-19
 Identities = 80/307 (26%), Positives = 142/307 (46%)

Query:    59 ELAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFC-QIYAGGTIDAA 117
             EL Q HS    E   R+T +T+ +  ++L       D   + N   FC ++  G  I+  
Sbjct:   119 ELLQVHSQ---EMYDRVT-NTEKMSHEDLANLEKISDSLYYNNESAFCARLACGSAIETC 174

Query:   118 RRL-NNQLCD-IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHA----RVLYIDI 171
               +   Q+ +  A+    G HHA+  +  GFC  N++ +    +L+       RVL +D 
Sbjct:   175 TAVVTGQVKNAFAVVRPPG-HHAEPHKPGGFCLFNNVSVTARSMLQRFPDKIKRVLIVDW 233

Query:   172 DVHHGDGVEEAFYFTDRVMTVSFHKFGD-LFFPGT--GDVKEIGEREGKFYAINVPLK-D 227
             D+HHG+G + AFY    V+ VS H++ +  F+PGT  G  +  GE  G    +N+P    
Sbjct:   234 DIHHGNGTQMAFYDDPNVLYVSLHRYENGRFYPGTNYGCAENCGEGPGLGRTVNIPWSCA 293

Query:   228 GIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKK 287
             G+ D  +   F+ ++  V   + P  +++ CG D+ AGD +G F L+   +A   + +  
Sbjct:   294 GMGDGDYIYAFQRVVMPVAYEFDPDLVIVSCGFDAAAGDHIGQFLLTPAAYAHMTQMLMG 353

Query:   288 F-NLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGH 346
               +  + ++  GGY  ++++         LL   +P   P   +  Y  P+    I   H
Sbjct:   354 LADGKVFISLEGGYNLDSISTSALAVAQSLLG--IP---PGRLHTTYACPQAVATI--NH 406

Query:   347 IENLNSK 353
             +  + S+
Sbjct:   407 VTKIQSQ 413


>UNIPROTKB|A6ND12 [details] [associations]
            symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            HOGENOM:HOG000225180 GO:GO:0004407 HOVERGEN:HBG057112 CTD:55869
            KO:K11405 EMBL:AL133500 EMBL:BX295542 UniGene:Hs.310536 DNASU:55869
            GeneID:55869 KEGG:hsa:55869 HGNC:HGNC:13315 PharmGKB:PA37766
            ChiTaRS:HDAC8 GenomeRNAi:55869 NextBio:61182 IPI:IPI00645419
            RefSeq:NP_001159894.1 ProteinModelPortal:A6ND12 SMR:A6ND12
            STRING:A6ND12 PRIDE:A6ND12 Ensembl:ENST00000373556 UCSC:uc022byw.1
            ArrayExpress:A6ND12 Bgee:A6ND12 Uniprot:A6ND12
        Length = 158

 Score = 237 (88.5 bits), Expect = 1.8e-19, P = 1.8e-19
 Identities = 47/115 (40%), Positives = 68/115 (59%)

Query:    28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITP--DTQHLFRQ 85
             P R  M H L+ +Y LHK+M I +P  A   E+A FH+  Y++ L +++   D  H    
Sbjct:    35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDH---P 91

Query:    86 ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKK 140
             +  +Y LG DCP  E +F++     G TI AA+ L + +C +AINW+GG HHAKK
Sbjct:    92 DSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKK 146


>UNIPROTKB|A6NJR3 [details] [associations]
            symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            HOGENOM:HOG000225180 GO:GO:0004407 HOVERGEN:HBG057112 CTD:55869
            KO:K11405 EMBL:AL133500 EMBL:BX295542 IPI:IPI00515065
            UniGene:Hs.310536 DNASU:55869 GeneID:55869 KEGG:hsa:55869
            HGNC:HGNC:13315 PharmGKB:PA37766 ChiTaRS:HDAC8 GenomeRNAi:55869
            NextBio:61182 RefSeq:NP_001159892.1 ProteinModelPortal:A6NJR3
            SMR:A6NJR3 STRING:A6NJR3 Ensembl:ENST00000373554 UCSC:uc022byx.1
            BindingDB:A6NJR3 ArrayExpress:A6NJR3 Bgee:A6NJR3 Uniprot:A6NJR3
        Length = 146

 Score = 237 (88.5 bits), Expect = 1.8e-19, P = 1.8e-19
 Identities = 47/115 (40%), Positives = 68/115 (59%)

Query:    28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITP--DTQHLFRQ 85
             P R  M H L+ +Y LHK+M I +P  A   E+A FH+  Y++ L +++   D  H    
Sbjct:    35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDH---P 91

Query:    86 ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKK 140
             +  +Y LG DCP  E +F++     G TI AA+ L + +C +AINW+GG HHAKK
Sbjct:    92 DSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKK 146


>UNIPROTKB|Q4K950 [details] [associations]
            symbol:aphA_2 "Acetylpolyamine aminohydrolase"
            species:220664 "Pseudomonas protegens Pf-5" [GO:0006598 "polyamine
            catabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
            evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
            EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006598
            eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 OMA:WSAQSAV HOGENOM:HOG000225182
            RefSeq:YP_261233.1 ProteinModelPortal:Q4K950 STRING:Q4K950
            GeneID:3476184 KEGG:pfl:PFL_4136 PATRIC:19877677
            ProtClustDB:CLSK920945 BioCyc:PFLU220664:GIX8-4171-MONOMER
            Uniprot:Q4K950
        Length = 341

 Score = 244 (91.0 bits), Expect = 3.0e-19, P = 3.0e-19
 Identities = 68/225 (30%), Positives = 109/225 (48%)

Query:    96 CPVFENLFEFCQIYAGGTIDAARRL-NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVL 154
             CPV E+ +      A   +  A+ L + +    A+    G HHA+   A GFCY+N+  +
Sbjct:   116 CPVGESTWRAAYWSAQSAVAGAQALLDGEPAAYALCRPPG-HHARSEAAGGFCYLNNAAI 174

Query:   155 GILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT-GDVKEIGE 213
                 L   +ARV  +D D+HHG G++E FY    V+ VS H     F+PG  G  +E G 
Sbjct:   175 AAQVLRDKYARVAVLDTDMHHGQGIQEIFYERADVLYVSVHGDPTNFYPGVAGFAEERGA 234

Query:   214 REGKFYAINVPLKDGIDDTSF-TRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFN 272
               G+ Y +N+P+  G  +  F  RL + +  + V+ +    +VL  G D    D      
Sbjct:   235 GAGEGYNLNLPMAHGASEGDFLARLEQAL--EAVKAFDAEVLVLSLGFDIYELDPQSKVA 292

Query:   273 LSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV---ARCWTVETG 314
             ++ DG A   + ++   LP L+   GGY  E++   AR +  ++G
Sbjct:   293 VTRDGFAILGQRIRSLGLPCLIVQEGGYHLESLEDNARAFFADSG 337


>FB|FBgn0026428 [details] [associations]
            symbol:HDAC6 "HDAC6" species:7227 "Drosophila melanogaster"
            [GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
            [GO:0016575 "histone deacetylation" evidence=IDA] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0006099 "tricarboxylic acid cycle" evidence=IDA]
            [GO:0022904 "respiratory electron transport chain" evidence=IDA]
            InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
            EMBL:AE014298 GO:GO:0008270 GO:GO:0006099 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0022904 KO:K11407 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            GeneTree:ENSGT00530000062809 CTD:10013 OMA:LQENWVC EMBL:FJ764839
            EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
            EMBL:FJ764854 EMBL:FJ764856 EMBL:FJ764858 EMBL:FJ764836
            EMBL:FJ764837 EMBL:FJ764840 EMBL:FJ764844 EMBL:FJ764846
            EMBL:FJ764849 EMBL:FJ764850 UniGene:Dm.3238 GeneID:32461
            KEGG:dme:Dmel_CG6170 FlyBase:FBgn0026428 GenomeRNAi:32461
            NextBio:778581 RefSeq:NP_727843.1 SMR:Q8IR37 STRING:Q8IR37
            EnsemblMetazoa:FBtr0074009 UCSC:CG6170-RC InParanoid:Q8IR37
            Uniprot:Q8IR37
        Length = 1138

 Score = 260 (96.6 bits), Expect = 3.7e-19, P = 3.7e-19
 Identities = 81/332 (24%), Positives = 151/332 (45%)

Query:     6 KISYFYDGDVGSVYFGPN---HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
             K+ Y YD  +  ++   N   HP +P R+   H +   Y L K+M+   P  A   E+  
Sbjct:   543 KVCYAYDAQM-LLHCNLNDTGHPEQPSRIQHIHKMHDDYGLLKQMKQLSPRAATTDEVCL 601

Query:    63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAG---GTIDAARR 119
              H+  +V  + R+              YN      +    F+   + AG     +D+  R
Sbjct:   602 AHTRAHVNTVRRLLGREPKELHDAAGIYN---SVYLHPRTFDCATLAAGLVLQAVDSVLR 658

Query:   120 LNNQ--LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHH 175
               ++  +C++      G HHA++    GFC  N++ +     ++     RVL +D DVHH
Sbjct:   659 GESRSGICNVR---PPG-HHAEQDHPHGFCIFNNVAIAAQYAIRDFGLERVLIVDWDVHH 714

Query:   176 GDGVEEAFYFTDRVMTVSFHKFGD-LFFP-GT-GDVKEIGEREGKFYAINVPL-KDGIDD 231
             G+G +  F    +V+ +S H++    FFP G  G+   +G+  G+ + +N+P  K G+ D
Sbjct:   715 GNGTQHIFESNPKVLYISLHRYEHGSFFPKGPDGNFDVVGKGAGRGFNVNIPWNKKGMGD 774

Query:   232 TSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF-NL 290
               +   F+ +I  +   + P  +++  G D+  GD LG   ++ +G+     ++    + 
Sbjct:   775 LEYALAFQQLIMPIAYEFNPQLVLVSAGFDAAIGDPLGGCKVTAEGYGMLTHWLSALASG 834

Query:   291 PLLVTGGGGYTKENVARCWTVETGILLDTELP 322
              ++V   GGY   +++   T+ T  LL   +P
Sbjct:   835 RIIVCLEGGYNVNSISYAMTMCTKTLLGDPVP 866

 Score = 219 (82.2 bits), Expect = 1.5e-14, P = 1.5e-14
 Identities = 63/216 (29%), Positives = 100/216 (46%)

Query:    59 ELAQFHSADYVEFLHRITPDTQHLFRQELT-KYNLGEDCPVFENLFEFCQIYAGGTIDAA 117
             E+ + H+ ++ E L   +        +EL+ +Y   +   +  + FE   + +G TI+  
Sbjct:   170 EILRLHTEEHFERLKETSGIRDDERMEELSSRY---DSIYIHPSTFELSLLASGSTIELV 226

Query:   118 RRL--NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDV 173
               L        +AI    G HHA K E +G+C+ N++ L     L  H   R+L ID DV
Sbjct:   227 DHLVAGKAQNGMAIIRPPG-HHAMKAEYNGYCFFNNVALATQHALDVHKLQRILIIDYDV 285

Query:   174 HHGDGVEEAFYFTDRVMTVSFHKFGD-LFFPGT--GDVKEIGEREGKFYAINVPLK-DGI 229
             HHG G +  FY   RV+  S H+F    F+P     D   IG   G  Y  NVPL   G+
Sbjct:   286 HHGQGTQRFFYNDPRVVYFSIHRFEHGSFWPHLHESDYHAIGSGAGTGYNFNVPLNATGM 345

Query:   230 DDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
              +  +  +F+ ++  V   + P  I++  G D+  G
Sbjct:   346 TNGDYLAIFQQLLLPVALEFQPELIIVSAGYDAALG 381


>UNIPROTKB|A6ND61 [details] [associations]
            symbol:HDAC8 "Histone deacetylase 8" species:9606 "Homo
            sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            HOGENOM:HOG000225180 HOVERGEN:HBG057112 CTD:55869 KO:K11405
            EMBL:AL133500 EMBL:BX295542 UniGene:Hs.310536 DNASU:55869
            GeneID:55869 KEGG:hsa:55869 HGNC:HGNC:13315 PharmGKB:PA37766
            ChiTaRS:HDAC8 GenomeRNAi:55869 NextBio:61182 IPI:IPI00642258
            RefSeq:NP_001159920.1 ProteinModelPortal:A6ND61 SMR:A6ND61
            STRING:A6ND61 Ensembl:ENST00000373559 UCSC:uc022byv.1
            ArrayExpress:A6ND61 Bgee:A6ND61 Uniprot:A6ND61
        Length = 139

 Score = 156 (60.0 bits), Expect = 5.4e-19, Sum P(2) = 5.4e-19
 Identities = 28/47 (59%), Positives = 35/47 (74%)

Query:   132 AGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDG 178
             A  LH   + EASGFCY+ND VLGIL L +   R+LY+D+D+HHGDG
Sbjct:    47 AYALHKQMRDEASGFCYLNDAVLGILRLRRKFERILYVDLDLHHGDG 93

 Score = 101 (40.6 bits), Expect = 5.4e-19, Sum P(2) = 5.4e-19
 Identities = 15/34 (44%), Positives = 27/34 (79%)

Query:   204 GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRL 237
             GTGDV ++G  +G++Y++NVP++DGI D  + ++
Sbjct:    93 GTGDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQI 126

 Score = 54 (24.1 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
 Identities = 10/20 (50%), Positives = 13/20 (65%)

Query:    28 PHRLCMTHHLVLSYDLHKKM 47
             P R  M H L+ +Y LHK+M
Sbjct:    35 PKRASMVHSLIEAYALHKQM 54


>UNIPROTKB|Q604Q2 [details] [associations]
            symbol:MCA2486 "Histone deacetylase/AcuC/AphA family
            protein" species:243233 "Methylococcus capsulatus str. Bath"
            [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
            EMBL:AE017282 GenomeReviews:AE017282_GR Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            HOGENOM:HOG000225183 OMA:VDAFRPQ RefSeq:YP_114898.1
            ProteinModelPortal:Q604Q2 GeneID:3104537 KEGG:mca:MCA2486
            PATRIC:22608838 Uniprot:Q604Q2
        Length = 310

 Score = 230 (86.0 bits), Expect = 1.1e-18, P = 1.1e-18
 Identities = 75/294 (25%), Positives = 123/294 (41%)

Query:    21 GPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQ 80
             GP HP    RL      + + +      +  P +A    L   HS  ++E +    P T 
Sbjct:    17 GPGHPEGSVRLAAIESALAAPEFRSLRRLEAP-RADISRLELVHSRRHIERVFASLPQTG 75

Query:    81 HLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKK 140
             H F    T  +          +   C +     I   +R  N  C  A+   G  HHA+ 
Sbjct:    76 HHFVDADTVVSPESGEAALHAVGAVC-LAVDEVI--GKRARNAFC--AVRPPG--HHAEP 128

Query:   141 CEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFG 198
               A GFC  N++ +     L  H   R+  +D DVHHG+G + AF    +V+ VS H++ 
Sbjct:   129 DAAMGFCLFNNIAIAAAHALANHGLQRIAIVDFDVHHGNGTQAAFRRNPQVLYVSTHQYP 188

Query:   199 DLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQC 258
               ++PGTG  +E G   G    +N+PL  G D  ++           ++ + P  +++  
Sbjct:   189 --WYPGTGSAEETGV--GNL--VNIPLPAGTDSAAYREAVTATALPAIDRFRPELVLISA 242

Query:   259 GADSLAGDRLGCFNLSIDGH----AECVRFVKKFNLPLLVTG-GGGYTKENVAR 307
             G D+   D L    L+ D +    AE ++   + +   +V+   GGY  E + R
Sbjct:   243 GFDAHRDDPLADLALTEDDYGWITAELMKLADRHSGGRIVSALEGGYALEALGR 296


>UNIPROTKB|F1NES1 [details] [associations]
            symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
            gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
            [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
            EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
            IPI:IPI00822143 Ensembl:ENSGALT00000039746 ArrayExpress:F1NES1
            Uniprot:F1NES1
        Length = 1054

 Score = 251 (93.4 bits), Expect = 3.5e-18, P = 3.5e-18
 Identities = 53/162 (32%), Positives = 91/162 (56%)

Query:   136 HHAKKCEASGFCYINDLVLGILELLKYH---ARVLYIDIDVHHGDGVEEAFYFTDRVMTV 192
             HHA++    GFCY N + +   +LL+     +++L +D DVHHG+G ++AFY    V+ +
Sbjct:   772 HHAEESTPMGFCYFNSVAIAA-KLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYI 830

Query:   193 SFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVE 247
             S H++ D  FFPG+G   E+G   G  + +N+    G+D    DT +   F+T++  +  
Sbjct:   831 SLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFTGGLDPPMGDTEYLTAFRTVVMPIAN 890

Query:   248 TYAPGAIVLQCGADSLAGDR--LGCFNLSIDGHAECVRFVKK 287
              +AP  +++  G D++ G    LG +NLS    A+C  ++ K
Sbjct:   891 EFAPDVVLVSSGFDAVEGHPTPLGGYNLS----AKCFGYLTK 928


>UNIPROTKB|F1NWX8 [details] [associations]
            symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
            gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0001501 "skeletal system
            development" evidence=IEA] [GO:0002076 "osteoblast development"
            evidence=IEA] [GO:0003714 "transcription corepressor activity"
            evidence=IEA] [GO:0004407 "histone deacetylase activity"
            evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0006338
            "chromatin remodeling" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0008285 "negative regulation of
            cell proliferation" evidence=IEA] [GO:0010832 "negative regulation
            of myotube differentiation" evidence=IEA] [GO:0010882 "regulation
            of cardiac muscle contraction by calcium ion signaling"
            evidence=IEA] [GO:0014894 "response to denervation involved in
            regulation of muscle adaptation" evidence=IEA] [GO:0017053
            "transcriptional repressor complex" evidence=IEA] [GO:0019901
            "protein kinase binding" evidence=IEA] [GO:0030955 "potassium ion
            binding" evidence=IEA] [GO:0031594 "neuromuscular junction"
            evidence=IEA] [GO:0033235 "positive regulation of protein
            sumoylation" evidence=IEA] [GO:0033613 "activating transcription
            factor binding" evidence=IEA] [GO:0034983 "peptidyl-lysine
            deacetylation" evidence=IEA] [GO:0042641 "actomyosin" evidence=IEA]
            [GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043393
            "regulation of protein binding" evidence=IEA] [GO:0043433 "negative
            regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IEA] [GO:0045668 "negative regulation of
            osteoblast differentiation" evidence=IEA] [GO:0045820 "negative
            regulation of glycolysis" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0070491 "repressing transcription factor binding" evidence=IEA]
            [GO:0070555 "response to interleukin-1" evidence=IEA] [GO:0070932
            "histone H3 deacetylation" evidence=IEA] [GO:0070933 "histone H4
            deacetylation" evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053
            GO:GO:0003714 GO:GO:0008285 GO:GO:0051091 GO:GO:0008284
            GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0031594
            GO:GO:0043393 GO:GO:0006338 GO:GO:0000122 GO:GO:0044212
            GO:GO:0043433 GO:GO:0070555 GO:GO:0033235 GO:GO:0045668
            GO:GO:0030955 GO:GO:0070932 GO:GO:0070933 GO:GO:0010832
            GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
            GO:GO:0004407 GeneTree:ENSGT00530000062809 IPI:IPI00597373
            InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
            GO:GO:0010882 EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
            Ensembl:ENSGALT00000006822 ArrayExpress:F1NWX8 Uniprot:F1NWX8
        Length = 1071

 Score = 251 (93.4 bits), Expect = 3.6e-18, P = 3.6e-18
 Identities = 53/162 (32%), Positives = 91/162 (56%)

Query:   136 HHAKKCEASGFCYINDLVLGILELLKYH---ARVLYIDIDVHHGDGVEEAFYFTDRVMTV 192
             HHA++    GFCY N + +   +LL+     +++L +D DVHHG+G ++AFY    V+ +
Sbjct:   789 HHAEESTPMGFCYFNSVAIAA-KLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYI 847

Query:   193 SFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVE 247
             S H++ D  FFPG+G   E+G   G  + +N+    G+D    DT +   F+T++  +  
Sbjct:   848 SLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFTGGLDPPMGDTEYLTAFRTVVMPIAN 907

Query:   248 TYAPGAIVLQCGADSLAGDR--LGCFNLSIDGHAECVRFVKK 287
              +AP  +++  G D++ G    LG +NLS    A+C  ++ K
Sbjct:   908 EFAPDVVLVSSGFDAVEGHPTPLGGYNLS----AKCFGYLTK 945


>UNIPROTKB|P83038 [details] [associations]
            symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
            gallus" [GO:0032041 "NAD-dependent histone deacetylase activity
            (H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
            activity (H3-K18 specific)" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
            binding" evidence=IEA] [GO:0030183 "B cell differentiation"
            evidence=TAS] [GO:0006954 "inflammatory response" evidence=TAS]
            [GO:0045843 "negative regulation of striated muscle tissue
            development" evidence=TAS] [GO:0007399 "nervous system development"
            evidence=TAS] [GO:0000118 "histone deacetylase complex"
            evidence=TAS] [GO:0004407 "histone deacetylase activity"
            evidence=TAS] [GO:0016568 "chromatin modification" evidence=TAS]
            [GO:0008134 "transcription factor binding" evidence=TAS]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=TAS] [GO:0042113 "B cell activation" evidence=TAS]
            [GO:0016575 "histone deacetylation" evidence=TAS] [GO:0006325
            "chromatin organization" evidence=TAS] InterPro:IPR017320
            PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0045892
            GO:GO:0007399 GO:GO:0046872 GO:GO:0006954 GO:GO:0006351
            GO:GO:0045843 GO:GO:0030183 GO:GO:0008134 GO:GO:0070932
            GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            KO:K11406 EMBL:AB052839 IPI:IPI00597373 RefSeq:NP_989644.1
            UniGene:Gga.3689 ProteinModelPortal:P83038 SMR:P83038 STRING:P83038
            GeneID:374207 KEGG:gga:374207 CTD:9759 HOGENOM:HOG000232065
            HOVERGEN:HBG057100 InParanoid:P83038 BindingDB:P83038
            ChEMBL:CHEMBL5599 NextBio:20813711 InterPro:IPR024643 Pfam:PF12203
            Uniprot:P83038
        Length = 1080

 Score = 251 (93.4 bits), Expect = 3.6e-18, P = 3.6e-18
 Identities = 53/162 (32%), Positives = 91/162 (56%)

Query:   136 HHAKKCEASGFCYINDLVLGILELLKYH---ARVLYIDIDVHHGDGVEEAFYFTDRVMTV 192
             HHA++    GFCY N + +   +LL+     +++L +D DVHHG+G ++AFY    V+ +
Sbjct:   798 HHAEESTPMGFCYFNSVAIAA-KLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYI 856

Query:   193 SFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVE 247
             S H++ D  FFPG+G   E+G   G  + +N+    G+D    DT +   F+T++  +  
Sbjct:   857 SLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFTGGLDPPMGDTEYLTAFRTVVMPIAN 916

Query:   248 TYAPGAIVLQCGADSLAGDR--LGCFNLSIDGHAECVRFVKK 287
              +AP  +++  G D++ G    LG +NLS    A+C  ++ K
Sbjct:   917 EFAPDVVLVSSGFDAVEGHPTPLGGYNLS----AKCFGYLTK 954


>UNIPROTKB|F1MYR0 [details] [associations]
            symbol:HDAC4 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
            [GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070555
            "response to interleukin-1" evidence=IEA] [GO:0070491 "repressing
            transcription factor binding" evidence=IEA] [GO:0051091 "positive
            regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045820 "negative regulation of glycolysis" evidence=IEA]
            [GO:0045668 "negative regulation of osteoblast differentiation"
            evidence=IEA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0043393 "regulation of protein binding" evidence=IEA]
            [GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0042641
            "actomyosin" evidence=IEA] [GO:0034983 "peptidyl-lysine
            deacetylation" evidence=IEA] [GO:0033613 "activating transcription
            factor binding" evidence=IEA] [GO:0033235 "positive regulation of
            protein sumoylation" evidence=IEA] [GO:0031594 "neuromuscular
            junction" evidence=IEA] [GO:0030955 "potassium ion binding"
            evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
            [GO:0017053 "transcriptional repressor complex" evidence=IEA]
            [GO:0014894 "response to denervation involved in regulation of
            muscle adaptation" evidence=IEA] [GO:0010882 "regulation of cardiac
            muscle contraction by calcium ion signaling" evidence=IEA]
            [GO:0010832 "negative regulation of myotube differentiation"
            evidence=IEA] [GO:0008285 "negative regulation of cell
            proliferation" evidence=IEA] [GO:0008284 "positive regulation of
            cell proliferation" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
            deacetylase activity" evidence=IEA] [GO:0003714 "transcription
            corepressor activity" evidence=IEA] [GO:0002076 "osteoblast
            development" evidence=IEA] [GO:0001501 "skeletal system
            development" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0000118 "histone deacetylase complex" evidence=IEA]
            InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053 GO:GO:0003714
            GO:GO:0008285 GO:GO:0051091 GO:GO:0008284 GO:GO:0043565
            GO:GO:0008270 GO:GO:0045944 GO:GO:0031594 GO:GO:0043393
            GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
            GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
            GO:GO:0045668 GO:GO:0030955 GO:GO:0070932 GO:GO:0070933
            GO:GO:0010832 GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
            GO:GO:0042641 GO:GO:0004407 GeneTree:ENSGT00530000062809
            InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
            GO:GO:0010882 EMBL:DAAA02009436 EMBL:DAAA02009437 EMBL:DAAA02009438
            EMBL:DAAA02009439 EMBL:DAAA02009440 EMBL:DAAA02009441
            EMBL:DAAA02009442 EMBL:DAAA02009443 EMBL:DAAA02009444
            EMBL:DAAA02009445 EMBL:DAAA02009446 EMBL:DAAA02009447
            EMBL:DAAA02009448 EMBL:DAAA02009449 EMBL:DAAA02009450
            EMBL:DAAA02009451 EMBL:DAAA02009452 EMBL:DAAA02009453
            EMBL:DAAA02009454 IPI:IPI00712439 Ensembl:ENSBTAT00000023621
            Uniprot:F1MYR0
        Length = 1084

 Score = 249 (92.7 bits), Expect = 6.2e-18, P = 6.2e-18
 Identities = 53/162 (32%), Positives = 90/162 (55%)

Query:   136 HHAKKCEASGFCYINDLVLGILELLKYH---ARVLYIDIDVHHGDGVEEAFYFTDRVMTV 192
             HHA++    GFCY N + +   +LL+     ++ L +D DVHHG+G ++AFY   RV+ +
Sbjct:   802 HHAEESTPMGFCYFNSVAIAA-KLLQQRLSVSKTLVVDWDVHHGNGTQQAFYSDPRVLYI 860

Query:   193 SFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVE 247
             S H++ D  FFPG+G   E+G   G  + +N+    G+D    D  +   F+T++  +  
Sbjct:   861 SLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIAS 920

Query:   248 TYAPGAIVLQCGADSLAGDR--LGCFNLSIDGHAECVRFVKK 287
              +AP  +++  G D++ G    LG +NLS    A+C  ++ K
Sbjct:   921 EFAPDVVLVSSGFDAVEGHPTPLGGYNLS----AKCFGYLTK 958


>UNIPROTKB|I3LM52 [details] [associations]
            symbol:HDAC4 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
            [GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0070555
            "response to interleukin-1" evidence=IEA] [GO:0070491 "repressing
            transcription factor binding" evidence=IEA] [GO:0051091 "positive
            regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045820 "negative regulation of glycolysis" evidence=IEA]
            [GO:0045668 "negative regulation of osteoblast differentiation"
            evidence=IEA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0043393 "regulation of protein binding" evidence=IEA]
            [GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0042641
            "actomyosin" evidence=IEA] [GO:0034983 "peptidyl-lysine
            deacetylation" evidence=IEA] [GO:0033613 "activating transcription
            factor binding" evidence=IEA] [GO:0033235 "positive regulation of
            protein sumoylation" evidence=IEA] [GO:0031594 "neuromuscular
            junction" evidence=IEA] [GO:0030955 "potassium ion binding"
            evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
            [GO:0017053 "transcriptional repressor complex" evidence=IEA]
            [GO:0014894 "response to denervation involved in regulation of
            muscle adaptation" evidence=IEA] [GO:0010882 "regulation of cardiac
            muscle contraction by calcium ion signaling" evidence=IEA]
            [GO:0010832 "negative regulation of myotube differentiation"
            evidence=IEA] [GO:0008285 "negative regulation of cell
            proliferation" evidence=IEA] [GO:0008284 "positive regulation of
            cell proliferation" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
            deacetylase activity" evidence=IEA] [GO:0003714 "transcription
            corepressor activity" evidence=IEA] [GO:0002076 "osteoblast
            development" evidence=IEA] [GO:0001501 "skeletal system
            development" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0000118 "histone deacetylase complex" evidence=IEA]
            InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0017053 GO:GO:0003714
            GO:GO:0008285 GO:GO:0051091 GO:GO:0008284 GO:GO:0043565
            GO:GO:0008270 GO:GO:0045944 GO:GO:0031594 GO:GO:0043393
            GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
            GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
            GO:GO:0045668 GO:GO:0030955 GO:GO:0070932 GO:GO:0070933
            GO:GO:0010832 GO:GO:0014894 GO:GO:0000118 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
            GO:GO:0042641 GO:GO:0004407 GeneTree:ENSGT00530000062809
            InterPro:IPR024643 Pfam:PF12203 OMA:VSFGGHR GO:GO:0034983
            GO:GO:0010882 EMBL:FP089685 Ensembl:ENSSSCT00000027033
            Uniprot:I3LM52
        Length = 1052

 Score = 248 (92.4 bits), Expect = 7.6e-18, P = 7.6e-18
 Identities = 52/161 (32%), Positives = 89/161 (55%)

Query:   136 HHAKKCEASGFCYINDLVLG--ILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 193
             HHA++    GFCY N + +   +L+   + ++ L +D DVHHG+G ++AFY    V+ VS
Sbjct:   770 HHAEESTPMGFCYFNSVAIAAKLLQQRLHVSKTLVVDWDVHHGNGTQQAFYSDPSVLYVS 829

Query:   194 FHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVET 248
              H++ D  FFPG+G   E+G   G  + +N+    G+D    D  +   F+T++  +   
Sbjct:   830 LHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIANE 889

Query:   249 YAPGAIVLQCGADSLAGDR--LGCFNLSIDGHAECVRFVKK 287
             +AP  +++  G D++ G    LG +NLS    A+C  ++ K
Sbjct:   890 FAPDVVLVSSGFDAVEGHPTPLGGYNLS----AKCFGYLTK 926


>UNIPROTKB|E5RGV4 [details] [associations]
            symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
            chromatin" evidence=IEA] [GO:0000792 "heterochromatin"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005657
            "replication fork" evidence=IEA] [GO:0005667 "transcription factor
            complex" evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0009913 "epidermal cell
            differentiation" evidence=IEA] [GO:0010977 "negative regulation of
            neuron projection development" evidence=IEA] [GO:0016358 "dendrite
            development" evidence=IEA] [GO:0017053 "transcriptional repressor
            complex" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
            [GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
            "chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
            dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
            morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
            apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
            of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
            "positive regulation of sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
            formation" evidence=IEA] [GO:0061029 "eyelid development in
            camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
            formation" evidence=IEA] [GO:0090090 "negative regulation of
            canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
            "regulation of protein deacetylation" evidence=IEA]
            InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
            GO:GO:0016358 GO:GO:0003700 GO:GO:0005667 GO:GO:0000122
            GO:GO:0000790 GO:GO:0048714 GO:GO:0042475 GO:GO:0090090
            GO:GO:0042733 GO:GO:0061029 GO:GO:0031490 GO:GO:0009913
            GO:GO:0000792 GO:GO:0005657 GO:GO:0060789 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0010977 GO:GO:0061198
            GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
            IPI:IPI00978755 ProteinModelPortal:E5RGV4 SMR:E5RGV4
            Ensembl:ENST00000518690 ArrayExpress:E5RGV4 Bgee:E5RGV4
            Uniprot:E5RGV4
        Length = 71

 Score = 221 (82.9 bits), Expect = 1.1e-17, P = 1.1e-17
 Identities = 36/71 (50%), Positives = 55/71 (77%)

Query:    26 MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
             MKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS +Y++FL  I PD    + +
Sbjct:     1 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSK 60

Query:    86 ELTKYNLGEDC 96
             ++ ++N+GEDC
Sbjct:    61 QMQRFNVGEDC 71


>UNIPROTKB|F1NP26 [details] [associations]
            symbol:HDAC4 "Histone deacetylase 4" species:9031 "Gallus
            gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
            [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
            EMBL:AADN02034435 EMBL:AADN02034436 EMBL:AADN02034437
            IPI:IPI00684228 Ensembl:ENSGALT00000033739 ArrayExpress:F1NP26
            Uniprot:F1NP26
        Length = 1062

 Score = 251 (93.4 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
 Identities = 53/162 (32%), Positives = 91/162 (56%)

Query:   136 HHAKKCEASGFCYINDLVLGILELLKYH---ARVLYIDIDVHHGDGVEEAFYFTDRVMTV 192
             HHA++    GFCY N + +   +LL+     +++L +D DVHHG+G ++AFY    V+ +
Sbjct:   780 HHAEESTPMGFCYFNSVAIAA-KLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYI 838

Query:   193 SFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVE 247
             S H++ D  FFPG+G   E+G   G  + +N+    G+D    DT +   F+T++  +  
Sbjct:   839 SLHRYDDGNFFPGSGAPDEVGTGAGVGFNVNMAFTGGLDPPMGDTEYLTAFRTVVMPIAN 898

Query:   248 TYAPGAIVLQCGADSLAGDR--LGCFNLSIDGHAECVRFVKK 287
              +AP  +++  G D++ G    LG +NLS    A+C  ++ K
Sbjct:   899 EFAPDVVLVSSGFDAVEGHPTPLGGYNLS----AKCFGYLTK 936

 Score = 40 (19.1 bits), Expect = 1.1e-17, Sum P(2) = 1.1e-17
 Identities = 20/70 (28%), Positives = 25/70 (35%)

Query:    23 NHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHL 82
             +HP    R+      +    L  K E  R  KA   EL   HS       H +   T  L
Sbjct:   648 SHPEHAGRIQSIWSRLQETGLRGKCECIRGRKATLEELQTVHSE-----AHTLLYGTNPL 702

Query:    83 FRQELTKYNL 92
              RQ+L    L
Sbjct:   703 NRQKLDSKKL 712


>UNIPROTKB|F6X8E7 [details] [associations]
            symbol:HDAC9 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0004407 "histone deacetylase activity"
            evidence=IEA] [GO:0000118 "histone deacetylase complex"
            evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
            OMA:YGTNPLD EMBL:AAEX03009354 Ensembl:ENSCAFT00000003949
            Uniprot:F6X8E7
        Length = 1068

 Score = 246 (91.7 bits), Expect = 1.3e-17, P = 1.3e-17
 Identities = 75/291 (25%), Positives = 137/291 (47%)

Query:   136 HHAKKCEASGFCYINDLVLGILELLKYH--ARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 193
             HHA++  A GFC+ N + +    L      +++L +D+DVHHG+G ++AFY    ++ +S
Sbjct:   784 HHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPSILYIS 843

Query:   194 FHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVET 248
              H++ +  FFPG+G   E+G   G+ Y IN+    G+D    D  +   F+T+++ V + 
Sbjct:   844 LHRYDEGNFFPGSGAPNEVGTGLGEGYNINIAWTGGLDPPMGDIEYLEAFRTVVTPVAKE 903

Query:   249 YAPGAIVLQCGADSLAGDR--LGCFNLSID--GH-AECVRFVKKFNLPLLVTGGGGYTKE 303
             + P  +++  G D+L G    LG + ++    GH  + +  +   ++ L + GG   T  
Sbjct:   904 FDPDMVLVSAGFDALEGHAPPLGGYKVTAKCFGHLTKQLMTLADGHVVLALEGGHDLT-- 961

Query:   304 NVARCWTVETGILLDTELPNEI-PENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQ 362
               A C   E  +  +  L NE+ P  E I +  P  +  I    I  + SK Y  +++M 
Sbjct:   962 --AICDASEACV--NALLGNELEPLAEDILHQTPNMNAVISLQKIIEIQSK-YWKSVRMV 1016

Query:   363 VLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERMDQHTQDKQIQRD 413
              +   R    A +   +E      +     D + P    D  T  + ++ +
Sbjct:  1017 AVP--RGCALAGTQLQEETETVSALASLTVDVEQPFASEDSRTAGEPMEEE 1065


>UNIPROTKB|F5GX36 [details] [associations]
            symbol:HDAC4 "Histone deacetylase 4" species:9606 "Homo
            sapiens" [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0001501 "skeletal system
            development" evidence=IEA] [GO:0002076 "osteoblast development"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003714
            "transcription corepressor activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=IEA]
            [GO:0008285 "negative regulation of cell proliferation"
            evidence=IEA] [GO:0010882 "regulation of cardiac muscle contraction
            by calcium ion signaling" evidence=IEA] [GO:0014894 "response to
            denervation involved in regulation of muscle adaptation"
            evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
            [GO:0030018 "Z disc" evidence=IEA] [GO:0031594 "neuromuscular
            junction" evidence=IEA] [GO:0031672 "A band" evidence=IEA]
            [GO:0033558 "protein deacetylase activity" evidence=IEA]
            [GO:0042493 "response to drug" evidence=IEA] [GO:0042641
            "actomyosin" evidence=IEA] [GO:0045668 "negative regulation of
            osteoblast differentiation" evidence=IEA] [GO:0045820 "negative
            regulation of glycolysis" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
            development" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005829 GO:GO:0005634 GO:GO:0003714 GO:GO:0008285
            GO:GO:0003677 GO:GO:0045944 GO:GO:0031594 GO:GO:0000122
            GO:GO:0001501 GO:GO:0002076 InterPro:IPR019154 Pfam:PF09757
            GO:GO:0045668 GO:GO:0048742 GO:GO:0014894 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820
            GO:GO:0042641 GO:GO:0033558 EMBL:AC017028 HGNC:HGNC:14063
            GO:GO:0010882 GO:GO:0006476 EMBL:AC062017 IPI:IPI01011861
            ProteinModelPortal:F5GX36 SMR:F5GX36 Ensembl:ENST00000543185
            ArrayExpress:F5GX36 Bgee:F5GX36 Uniprot:F5GX36
        Length = 668

 Score = 242 (90.2 bits), Expect = 1.7e-17, P = 1.7e-17
 Identities = 52/162 (32%), Positives = 89/162 (54%)

Query:   136 HHAKKCEASGFCYINDLVLGILELLKYH---ARVLYIDIDVHHGDGVEEAFYFTDRVMTV 192
             HHA++    GFCY N + +   +LL+     +++L +D DVHHG+G ++AFY    V+ +
Sbjct:   386 HHAEESTPMGFCYFNSVAVAA-KLLQQRLSVSKILIVDWDVHHGNGTQQAFYSDPSVLYM 444

Query:   193 SFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVE 247
             S H++ D  FFPG+G   E+G   G  + +N+    G+D    D  +   F+T++  +  
Sbjct:   445 SLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIAS 504

Query:   248 TYAPGAIVLQCGADSLAGDR--LGCFNLSIDGHAECVRFVKK 287
              +AP  +++  G D++ G    LG +NLS    A C  ++ K
Sbjct:   505 EFAPDVVLVSSGFDAVEGHPTPLGGYNLS----ARCFGYLTK 542


>RGD|619979 [details] [associations]
            symbol:Hdac4 "histone deacetylase 4" species:10116 "Rattus
            norvegicus" [GO:0000118 "histone deacetylase complex"
            evidence=IEA;ISO] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0001047
            "core promoter binding" evidence=IDA] [GO:0001501 "skeletal system
            development" evidence=IEA;ISO] [GO:0002076 "osteoblast development"
            evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
            [GO:0003677 "DNA binding" evidence=ISO] [GO:0003714 "transcription
            corepressor activity" evidence=IEA;ISO] [GO:0004407 "histone
            deacetylase activity" evidence=ISO;IMP] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
            [GO:0005829 "cytosol" evidence=IEA;ISO;IDA] [GO:0006338 "chromatin
            remodeling" evidence=IEA;ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006476 "protein deacetylation"
            evidence=ISO] [GO:0008134 "transcription factor binding"
            evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA;ISO]
            [GO:0008284 "positive regulation of cell proliferation"
            evidence=IEA;ISO] [GO:0008285 "negative regulation of cell
            proliferation" evidence=IEA;ISO] [GO:0010832 "negative regulation
            of myotube differentiation" evidence=IEA;ISO] [GO:0010882
            "regulation of cardiac muscle contraction by calcium ion signaling"
            evidence=IEA;ISO] [GO:0014894 "response to denervation involved in
            regulation of muscle adaptation" evidence=IEA;ISO] [GO:0016575
            "histone deacetylation" evidence=ISO;IMP] [GO:0017053
            "transcriptional repressor complex" evidence=IEA;ISO] [GO:0019901
            "protein kinase binding" evidence=IEA;ISO] [GO:0030017 "sarcomere"
            evidence=IDA] [GO:0030018 "Z disc" evidence=IDA] [GO:0030955
            "potassium ion binding" evidence=IEA;ISO] [GO:0031594
            "neuromuscular junction" evidence=IEA;ISO] [GO:0031672 "A band"
            evidence=IDA] [GO:0032041 "NAD-dependent histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0033235 "positive
            regulation of protein sumoylation" evidence=IEA;ISO] [GO:0033558
            "protein deacetylase activity" evidence=ISO] [GO:0033613
            "activating transcription factor binding" evidence=IEA;ISO]
            [GO:0034983 "peptidyl-lysine deacetylation" evidence=IEA;ISO]
            [GO:0042493 "response to drug" evidence=IDA] [GO:0042641
            "actomyosin" evidence=IEA;ISO] [GO:0042826 "histone deacetylase
            binding" evidence=IEA;ISO] [GO:0043234 "protein complex"
            evidence=IDA] [GO:0043393 "regulation of protein binding"
            evidence=IEA;ISO] [GO:0043433 "negative regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA;ISO] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IEA;ISO] [GO:0045668 "negative regulation of
            osteoblast differentiation" evidence=IEA;ISO] [GO:0045820 "negative
            regulation of glycolysis" evidence=IEA;ISO] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=ISO]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISO] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0048742 "regulation
            of skeletal muscle fiber development" evidence=ISO] [GO:0051091
            "positive regulation of sequence-specific DNA binding transcription
            factor activity" evidence=IEA;ISO] [GO:0051153 "regulation of
            striated muscle cell differentiation" evidence=ISO] [GO:0070491
            "repressing transcription factor binding" evidence=IEA;ISO]
            [GO:0070555 "response to interleukin-1" evidence=IEA;ISO]
            [GO:0070932 "histone H3 deacetylation" evidence=ISO] [GO:0070933
            "histone H4 deacetylation" evidence=ISO] [GO:0097372 "NAD-dependent
            histone deacetylase activity (H3-K18 specific)" evidence=IEA]
            InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619979
            INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005634 GO:GO:0017053
            GO:GO:0003714 GO:GO:0008285 GO:GO:0030018 GO:GO:0051091
            GO:GO:0042493 GO:GO:0008284 GO:GO:0043565 GO:GO:0008270
            GO:GO:0045944 GO:GO:0031594 GO:GO:0043393 GO:GO:0006351
            GO:GO:0006338 GO:GO:0000122 GO:GO:0044212 GO:GO:0001501
            GO:GO:0002076 GO:GO:0043433 GO:GO:0070555 GO:GO:0033235
            GO:GO:0045668 GO:GO:0030955 GO:GO:0010832 GO:GO:0014894
            GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
            GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0031672 GO:GO:0045820
            GO:GO:0042641 GeneTree:ENSGT00530000062809 KO:K11406 CTD:9759
            HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
            Pfam:PF12203 OrthoDB:EOG44MXRC GO:GO:0034983 GO:GO:0010882
            EMBL:AABR03067902 EMBL:AABR03068091 EMBL:AABR03070452 EMBL:AF321132
            IPI:IPI00367142 RefSeq:NP_445901.1 UniGene:Rn.23483
            ProteinModelPortal:Q99P99 SMR:Q99P99 STRING:Q99P99
            PhosphoSite:Q99P99 PRIDE:Q99P99 Ensembl:ENSRNOT00000027622
            GeneID:363287 KEGG:rno:363287 UCSC:RGD:619979 InParanoid:Q99P99
            BindingDB:Q99P99 ChEMBL:CHEMBL2874 NextBio:683134
            Genevestigator:Q99P99 Uniprot:Q99P99
        Length = 1077

 Score = 244 (91.0 bits), Expect = 2.3e-17, P = 2.3e-17
 Identities = 52/162 (32%), Positives = 90/162 (55%)

Query:   136 HHAKKCEASGFCYINDLVLGILELLKYH---ARVLYIDIDVHHGDGVEEAFYFTDRVMTV 192
             HHA++    GFCY N + +   +LL+     +++L +D DVHHG+G ++AFY    V+ +
Sbjct:   795 HHAEESTPMGFCYFNSVAIAA-KLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYM 853

Query:   193 SFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVE 247
             S H++ D  FFPG+G   E+G   G  + +N+    G+D    D  +   F+T++  +  
Sbjct:   854 SLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIAN 913

Query:   248 TYAPGAIVLQCGADSLAGDR--LGCFNLSIDGHAECVRFVKK 287
              +AP  +++  G D++ G    LG +NLS    A+C  ++ K
Sbjct:   914 EFAPDVVLVSSGFDAVEGHPTPLGGYNLS----AKCFGYLTK 951


>UNIPROTKB|F1PRU6 [details] [associations]
            symbol:HDAC4 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0004407 "histone deacetylase activity"
            evidence=IEA] [GO:0000118 "histone deacetylase complex"
            evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
            OMA:VSFGGHR EMBL:AAEX03014510 EMBL:AAEX03014511 EMBL:AAEX03014512
            EMBL:AAEX03014513 EMBL:AAEX03014514 EMBL:AAEX03014515
            Ensembl:ENSCAFT00000019989 Uniprot:F1PRU6
        Length = 1084

 Score = 243 (90.6 bits), Expect = 2.9e-17, P = 2.9e-17
 Identities = 52/162 (32%), Positives = 89/162 (54%)

Query:   136 HHAKKCEASGFCYINDLVLGILELLKYH---ARVLYIDIDVHHGDGVEEAFYFTDRVMTV 192
             HHA++    GFCY N + +   +LL+     ++ L +D DVHHG+G ++AFY    V+ +
Sbjct:   801 HHAEESTPMGFCYFNSVAIAA-KLLQQRLDVSKTLIVDWDVHHGNGTQQAFYNDPNVLYI 859

Query:   193 SFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVE 247
             S H++ D  FFPG+G   E+G   G  + +N+    G+D    D  +   F+T++  +  
Sbjct:   860 SLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIAN 919

Query:   248 TYAPGAIVLQCGADSLAGDR--LGCFNLSIDGHAECVRFVKK 287
              +AP  +++  G D++ G    LG +NLS    A+C  ++ K
Sbjct:   920 EFAPDVVLVSSGFDAVEGHPTPLGGYNLS----AKCFGYLTK 957


>UNIPROTKB|Q3Z9M2 [details] [associations]
            symbol:DET0330 "Histone deacetylase family protein"
            species:243164 "Dehalococcoides ethenogenes 195" [GO:0008150
            "biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
            EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG0123
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_181077.1
            ProteinModelPortal:Q3Z9M2 STRING:Q3Z9M2 GeneID:3230398
            KEGG:det:DET0330 PATRIC:21607729 OMA:HIDLHER ProtClustDB:CLSK837557
            BioCyc:DETH243164:GJNF-330-MONOMER Uniprot:Q3Z9M2
        Length = 341

 Score = 230 (86.0 bits), Expect = 3.2e-17, P = 3.2e-17
 Identities = 84/310 (27%), Positives = 129/310 (41%)

Query:    24 HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
             H   P RL      + ++ L  ++    P +    EL  FH+  Y+  +  +        
Sbjct:    19 HVENPDRLLAIMEYINTHGLKDRLVHVEPKRVGLGELEGFHTRKYISRVEEVGFSGGGW- 77

Query:    84 RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARR-LNNQLCDIAINWAGGLHHAKKCE 142
                     L +D  +  + +E      GG ++   + L+ +L    +      HHA    
Sbjct:    78 --------LDQDTVISVDSYETALYAVGGVLEGVDKVLSGELESAFVMCRPPGHHALPEA 129

Query:   143 ASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDL 200
             + GFC  N++ LG L  L  H   RV  +D DVHHG+G++       RV  +S H+    
Sbjct:   130 SMGFCIFNNVALGALHALNKHRLKRVAVVDFDVHHGNGIQHVCLNDPRVTYISTHQIHH- 188

Query:   201 FFPGTGDVKEIGEREGKFYAI-NVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCG 259
              FP TGD  E    +G F  I N+PL  G  D+ + ++F  +I   +   +P  I++  G
Sbjct:   189 -FPFTGDSCE----DGPFQNILNIPLPAGCGDSHYQKVFDQLICPYLRKLSPELILVCAG 243

Query:   260 ADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG-------GGYTKENVARCWTVE 312
              D+   D +G   LS  G A   R +KK      V GG       GGY    +A      
Sbjct:   244 YDAHFADDMGEMCLSQQGFAGITRALKKTADE--VCGGKMVFSLEGGYHYLGLAESVGAS 301

Query:   313 TGILLDTELP 322
               +LLD  LP
Sbjct:   302 LAVLLDEALP 311


>TIGR_CMR|DET_0330 [details] [associations]
            symbol:DET_0330 "histone deacetylase family protein"
            species:243164 "Dehalococcoides ethenogenes 195" [GO:0004407
            "histone deacetylase activity" evidence=ISS] [GO:0008150
            "biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
            EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG0123
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_181077.1
            ProteinModelPortal:Q3Z9M2 STRING:Q3Z9M2 GeneID:3230398
            KEGG:det:DET0330 PATRIC:21607729 OMA:HIDLHER ProtClustDB:CLSK837557
            BioCyc:DETH243164:GJNF-330-MONOMER Uniprot:Q3Z9M2
        Length = 341

 Score = 230 (86.0 bits), Expect = 3.2e-17, P = 3.2e-17
 Identities = 84/310 (27%), Positives = 129/310 (41%)

Query:    24 HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
             H   P RL      + ++ L  ++    P +    EL  FH+  Y+  +  +        
Sbjct:    19 HVENPDRLLAIMEYINTHGLKDRLVHVEPKRVGLGELEGFHTRKYISRVEEVGFSGGGW- 77

Query:    84 RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARR-LNNQLCDIAINWAGGLHHAKKCE 142
                     L +D  +  + +E      GG ++   + L+ +L    +      HHA    
Sbjct:    78 --------LDQDTVISVDSYETALYAVGGVLEGVDKVLSGELESAFVMCRPPGHHALPEA 129

Query:   143 ASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDL 200
             + GFC  N++ LG L  L  H   RV  +D DVHHG+G++       RV  +S H+    
Sbjct:   130 SMGFCIFNNVALGALHALNKHRLKRVAVVDFDVHHGNGIQHVCLNDPRVTYISTHQIHH- 188

Query:   201 FFPGTGDVKEIGEREGKFYAI-NVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCG 259
              FP TGD  E    +G F  I N+PL  G  D+ + ++F  +I   +   +P  I++  G
Sbjct:   189 -FPFTGDSCE----DGPFQNILNIPLPAGCGDSHYQKVFDQLICPYLRKLSPELILVCAG 243

Query:   260 ADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG-------GGYTKENVARCWTVE 312
              D+   D +G   LS  G A   R +KK      V GG       GGY    +A      
Sbjct:   244 YDAHFADDMGEMCLSQQGFAGITRALKKTADE--VCGGKMVFSLEGGYHYLGLAESVGAS 301

Query:   313 TGILLDTELP 322
               +LLD  LP
Sbjct:   302 LAVLLDEALP 311


>UNIPROTKB|P56524 [details] [associations]
            symbol:HDAC4 "Histone deacetylase 4" species:9606 "Homo
            sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
            specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
            activity (H3-K18 specific)" evidence=IEA] [GO:0001501 "skeletal
            system development" evidence=IEA] [GO:0002076 "osteoblast
            development" evidence=IEA] [GO:0003714 "transcription corepressor
            activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0008285 "negative regulation of cell proliferation"
            evidence=IEA] [GO:0010882 "regulation of cardiac muscle contraction
            by calcium ion signaling" evidence=IEA] [GO:0019901 "protein kinase
            binding" evidence=IEA] [GO:0030018 "Z disc" evidence=IEA]
            [GO:0031594 "neuromuscular junction" evidence=IEA] [GO:0031672 "A
            band" evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
            [GO:0042641 "actomyosin" evidence=IEA] [GO:0045668 "negative
            regulation of osteoblast differentiation" evidence=IEA] [GO:0042113
            "B cell activation" evidence=TAS] [GO:0030183 "B cell
            differentiation" evidence=TAS] [GO:0006954 "inflammatory response"
            evidence=TAS] [GO:0033235 "positive regulation of protein
            sumoylation" evidence=IDA] [GO:0007399 "nervous system development"
            evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IMP;IDA] [GO:0004407 "histone
            deacetylase activity" evidence=IDA] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IDA;IMP]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0010832 "negative regulation of myotube differentiation"
            evidence=IMP] [GO:0042826 "histone deacetylase binding"
            evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043393
            "regulation of protein binding" evidence=IMP] [GO:0030955
            "potassium ion binding" evidence=IDA] [GO:0008270 "zinc ion
            binding" evidence=IDA] [GO:0033558 "protein deacetylase activity"
            evidence=IDA] [GO:0034983 "peptidyl-lysine deacetylation"
            evidence=IDA] [GO:0017053 "transcriptional repressor complex"
            evidence=IDA] [GO:0008134 "transcription factor binding"
            evidence=IPI] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISS;IMP] [GO:0014894
            "response to denervation involved in regulation of muscle
            adaptation" evidence=ISS] [GO:0045820 "negative regulation of
            glycolysis" evidence=ISS] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0043433 "negative
            regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IMP] [GO:0016575 "histone deacetylation"
            evidence=IDA;IMP] [GO:0000118 "histone deacetylase complex"
            evidence=IDA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IDA] [GO:0006338 "chromatin remodeling"
            evidence=IDA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IMP] [GO:0070491 "repressing transcription
            factor binding" evidence=IPI] [GO:0070932 "histone H3
            deacetylation" evidence=IDA] [GO:0070933 "histone H4 deacetylation"
            evidence=IDA] [GO:0070555 "response to interleukin-1" evidence=IMP]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0051091 "positive
            regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IMP] [GO:0033613 "activating transcription
            factor binding" evidence=IPI] [GO:0014898 "cardiac muscle
            hypertrophy in response to stress" evidence=TAS] InterPro:IPR017320
            PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
            GO:GO:0005737 Pathway_Interaction_DB:hdac_classii_pathway
            Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 PDB:3UZD
            PDBsum:3UZD GO:GO:0008285 GO:GO:0007399 GO:GO:0051091 GO:GO:0003677
            GO:GO:0008284 GO:GO:0008270 GO:GO:0006954 GO:GO:0045944
            GO:GO:0031594 GO:GO:0043393 GO:GO:0006351 GO:GO:0006338
            GO:GO:0000122 GO:GO:0001501 GO:GO:0002076
            Pathway_Interaction_DB:hdac_classiii_pathway GO:GO:0030183
            GO:GO:0043433 GO:GO:0070555 GO:GO:0033235 GO:GO:0014898
            Pathway_Interaction_DB:hdac_classi_pathway PDB:3V31 PDBsum:3V31
            InterPro:IPR019154 Pfam:PF09757 GO:GO:0045668 GO:GO:0030955
            GO:GO:0070932 GO:GO:0070933 GO:GO:0010832 GO:GO:0014894
            GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
            GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
            BRENDA:3.5.1.98 GO:GO:0004407 KO:K11406
            Pathway_Interaction_DB:ranbp2pathway CTD:9759 HOGENOM:HOG000232065
            HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203 EMBL:AF132607
            EMBL:AB006626 EMBL:AC017028 IPI:IPI00010088 RefSeq:NP_006028.2
            UniGene:Hs.20516 PDB:2H8N PDB:2O94 PDB:2VQJ PDB:2VQM PDB:2VQO
            PDB:2VQQ PDB:2VQV PDB:2VQW PDB:3UXG PDBsum:2H8N PDBsum:2O94
            PDBsum:2VQJ PDBsum:2VQM PDBsum:2VQO PDBsum:2VQQ PDBsum:2VQV
            PDBsum:2VQW PDBsum:3UXG ProteinModelPortal:P56524 SMR:P56524
            IntAct:P56524 MINT:MINT-104901 STRING:P56524 PhosphoSite:P56524
            DMDM:259016348 PaxDb:P56524 PRIDE:P56524 Ensembl:ENST00000345617
            GeneID:9759 KEGG:hsa:9759 UCSC:uc002vyk.4 GeneCards:GC02M239969
            HGNC:HGNC:14063 HPA:CAB004431 MIM:600430 MIM:605314
            neXtProt:NX_P56524 Orphanet:1001 PharmGKB:PA29229 InParanoid:P56524
            OMA:VSFGGHR OrthoDB:EOG44MXRC PhylomeDB:P56524 BindingDB:P56524
            ChEMBL:CHEMBL3524 EvolutionaryTrace:P56524 GenomeRNAi:9759
            NextBio:36731 ArrayExpress:P56524 Bgee:P56524 CleanEx:HS_HDAC4
            Genevestigator:P56524 GermOnline:ENSG00000068024 GO:GO:0034983
            GO:GO:0010882 Uniprot:P56524
        Length = 1084

 Score = 242 (90.2 bits), Expect = 3.8e-17, P = 3.8e-17
 Identities = 52/162 (32%), Positives = 89/162 (54%)

Query:   136 HHAKKCEASGFCYINDLVLGILELLKYH---ARVLYIDIDVHHGDGVEEAFYFTDRVMTV 192
             HHA++    GFCY N + +   +LL+     +++L +D DVHHG+G ++AFY    V+ +
Sbjct:   802 HHAEESTPMGFCYFNSVAVAA-KLLQQRLSVSKILIVDWDVHHGNGTQQAFYSDPSVLYM 860

Query:   193 SFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVE 247
             S H++ D  FFPG+G   E+G   G  + +N+    G+D    D  +   F+T++  +  
Sbjct:   861 SLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLDPPMGDAEYLAAFRTVVMPIAS 920

Query:   248 TYAPGAIVLQCGADSLAGDR--LGCFNLSIDGHAECVRFVKK 287
              +AP  +++  G D++ G    LG +NLS    A C  ++ K
Sbjct:   921 EFAPDVVLVSSGFDAVEGHPTPLGGYNLS----ARCFGYLTK 958


>MGI|MGI:3036234 [details] [associations]
            symbol:Hdac4 "histone deacetylase 4" species:10090 "Mus
            musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0001047 "core
            promoter binding" evidence=ISO] [GO:0001501 "skeletal system
            development" evidence=IMP] [GO:0002076 "osteoblast development"
            evidence=IMP] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003714
            "transcription corepressor activity" evidence=IGI] [GO:0004407
            "histone deacetylase activity" evidence=ISO] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IMP]
            [GO:0005737 "cytoplasm" evidence=ISO;IMP] [GO:0005829 "cytosol"
            evidence=ISO;IDA] [GO:0006338 "chromatin remodeling" evidence=ISO]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006476 "protein deacetylation" evidence=IDA]
            [GO:0008134 "transcription factor binding" evidence=ISO;IPI]
            [GO:0008270 "zinc ion binding" evidence=ISO] [GO:0008284 "positive
            regulation of cell proliferation" evidence=ISO] [GO:0008285
            "negative regulation of cell proliferation" evidence=IMP;IDA]
            [GO:0010832 "negative regulation of myotube differentiation"
            evidence=ISO] [GO:0010882 "regulation of cardiac muscle contraction
            by calcium ion signaling" evidence=IMP] [GO:0014894 "response to
            denervation involved in regulation of muscle adaptation"
            evidence=IMP] [GO:0016568 "chromatin modification" evidence=IEA]
            [GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0017053 "transcriptional
            repressor complex" evidence=ISO] [GO:0019901 "protein kinase
            binding" evidence=IPI] [GO:0030017 "sarcomere" evidence=ISO]
            [GO:0030018 "Z disc" evidence=ISO] [GO:0030955 "potassium ion
            binding" evidence=ISO] [GO:0031078 "histone deacetylase activity
            (H3-K14 specific)" evidence=IEA] [GO:0031594 "neuromuscular
            junction" evidence=IDA] [GO:0031672 "A band" evidence=ISO]
            [GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
            specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
            (H3-K9 specific)" evidence=IEA] [GO:0033235 "positive regulation of
            protein sumoylation" evidence=ISO] [GO:0033558 "protein deacetylase
            activity" evidence=ISO;IDA] [GO:0033613 "activating transcription
            factor binding" evidence=ISO] [GO:0034739 "histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0034983
            "peptidyl-lysine deacetylation" evidence=ISO] [GO:0042493 "response
            to drug" evidence=ISO] [GO:0042641 "actomyosin" evidence=IDA]
            [GO:0042826 "histone deacetylase binding" evidence=ISO] [GO:0043234
            "protein complex" evidence=ISO] [GO:0043393 "regulation of protein
            binding" evidence=ISO] [GO:0043433 "negative regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=ISO] [GO:0045668 "negative regulation of osteoblast
            differentiation" evidence=IMP] [GO:0045820 "negative regulation of
            glycolysis" evidence=IMP] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=ISO;IDA;IMP] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=IMP]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISO;IMP] [GO:0046872 "metal ion
            binding" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
            development" evidence=IGI] [GO:0051091 "positive regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=ISO] [GO:0051153 "regulation of striated muscle cell
            differentiation" evidence=IGI] [GO:0070491 "repressing
            transcription factor binding" evidence=ISO] [GO:0070555 "response
            to interleukin-1" evidence=ISO] [GO:0070932 "histone H3
            deacetylation" evidence=IEA;ISO] [GO:0070933 "histone H4
            deacetylation" evidence=IEA;ISO] InterPro:IPR017320
            PIRSF:PIRSF037911 Pfam:PF00850 MGI:MGI:3036234 INTERPRO:IPR000286
            GO:GO:0005829 GO:GO:0005634 GO:GO:0017053 GO:GO:0003714
            GO:GO:0008285 GO:GO:0051091 GO:GO:0003677 GO:GO:0008284
            GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0031594
            GO:GO:0043393 GO:GO:0006351 GO:GO:0006338 GO:GO:0000122
            GO:GO:0044212 GO:GO:0001501 GO:GO:0002076 GO:GO:0043433
            GO:GO:0070555 GO:GO:0033235 GO:GO:0045668 GO:GO:0030955
            GO:GO:0010832 GO:GO:0048742 GO:GO:0014894 GO:GO:0000118
            eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0045820 GO:GO:0042641
            GeneTree:ENSGT00530000062809 HSSP:Q70I53 KO:K11406 GO:GO:0033558
            CTD:9759 HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
            Pfam:PF12203 OMA:VSFGGHR OrthoDB:EOG44MXRC GO:GO:0034983
            GO:GO:0010882 EMBL:AK029933 EMBL:AK155250 EMBL:AK162369
            EMBL:BC066052 IPI:IPI00411004 IPI:IPI00466540 RefSeq:NP_997108.1
            UniGene:Mm.318567 ProteinModelPortal:Q6NZM9 SMR:Q6NZM9
            DIP:DIP-36317N IntAct:Q6NZM9 STRING:Q6NZM9 PhosphoSite:Q6NZM9
            PaxDb:Q6NZM9 PRIDE:Q6NZM9 Ensembl:ENSMUST00000008995 GeneID:208727
            KEGG:mmu:208727 UCSC:uc007cbe.1 UCSC:uc007cbf.1 InParanoid:Q6NZM9
            NextBio:372399 Bgee:Q6NZM9 CleanEx:MM_HDAC4 Genevestigator:Q6NZM9
            Uniprot:Q6NZM9
        Length = 1076

 Score = 239 (89.2 bits), Expect = 8.2e-17, P = 8.2e-17
 Identities = 51/162 (31%), Positives = 90/162 (55%)

Query:   136 HHAKKCEASGFCYINDLVLGILELLKYH---ARVLYIDIDVHHGDGVEEAFYFTDRVMTV 192
             HHA++    GFCY N + +   +LL+     +++L +D DVHHG+G ++AFY    V+ +
Sbjct:   794 HHAEESTPMGFCYFNSVAVAA-KLLQQRLNVSKILIVDWDVHHGNGTQQAFYNDPNVLYM 852

Query:   193 SFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVE 247
             S H++ D  FFPG+G   E+G   G  + +N+    G++    D  +   F+T++  +  
Sbjct:   853 SLHRYDDGNFFPGSGAPDEVGTGPGVGFNVNMAFTGGLEPPMGDAEYLAAFRTVVMPIAN 912

Query:   248 TYAPGAIVLQCGADSLAGDR--LGCFNLSIDGHAECVRFVKK 287
              +AP  +++  G D++ G    LG +NLS    A+C  ++ K
Sbjct:   913 EFAPDVVLVSSGFDAVEGHPTPLGGYNLS----AKCFGYLTK 950


>UNIPROTKB|F1LSN5 [details] [associations]
            symbol:F1LSN5 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0000118 "histone deacetylase complex"
            evidence=IEA] [GO:0004407 "histone deacetylase activity"
            evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            GeneTree:ENSGT00530000062809 IPI:IPI01016416
            Ensembl:ENSRNOT00000011159 ArrayExpress:F1LSN5 Uniprot:F1LSN5
        Length = 932

 Score = 237 (88.5 bits), Expect = 1.1e-16, P = 1.1e-16
 Identities = 58/192 (30%), Positives = 100/192 (52%)

Query:   116 AARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYH--ARVLYIDIDV 173
             A+R L N     A+    G HHA    A GFC+ N + +   +L ++   +++L +D DV
Sbjct:   634 ASRELKN---GFAVVRPPG-HHADHSTAMGFCFFNSVAIACRQLQQHGKASKILIVDWDV 689

Query:   174 HHGDGVEEAFYFTDRVMTVSFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID-- 230
             HHG+G ++ FY   RV+ +S H+  D  FFPG+G V E+G   G+ + +NV    G+D  
Sbjct:   690 HHGNGTQQTFYQDPRVLYISLHRHDDGNFFPGSGAVDEVGTGSGEGFNVNVAWAGGLDPP 749

Query:   231 --DTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR--LGCFNLSIDGHAECVRFVK 286
               D  +   F+ ++  +   +AP  +++  G D+  G    LG +++S    A+C  ++ 
Sbjct:   750 MGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYHVS----AKCFGYMT 805

Query:   287 KFNLPLLVTGGG 298
             +    L+   GG
Sbjct:   806 Q---QLMSLAGG 814


>RGD|1310748 [details] [associations]
            symbol:Hdac9 "histone deacetylase 9" species:10116 "Rattus
            norvegicus" [GO:0000122 "negative regulation of transcription from
            RNA polymerase II promoter" evidence=ISO] [GO:0003674
            "molecular_function" evidence=ND] [GO:0003714 "transcription
            corepressor activity" evidence=ISO] [GO:0004407 "histone
            deacetylase activity" evidence=ISO] [GO:0005080 "protein kinase C
            binding" evidence=ISO] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
            "transcription factor complex" evidence=ISO] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0007507 "heart development"
            evidence=ISO] [GO:0008134 "transcription factor binding"
            evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
            [GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0032869 "cellular response
            to insulin stimulus" evidence=ISO] [GO:0033558 "protein deacetylase
            activity" evidence=ISO] [GO:0034983 "peptidyl-lysine deacetylation"
            evidence=ISO] [GO:0035097 "histone methyltransferase complex"
            evidence=ISO] [GO:0042826 "histone deacetylase binding"
            evidence=ISO] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISO] [GO:0048742 "regulation of skeletal
            muscle fiber development" evidence=ISO] [GO:0051153 "regulation of
            striated muscle cell differentiation" evidence=ISO] [GO:0070491
            "repressing transcription factor binding" evidence=ISO] [GO:0070932
            "histone H3 deacetylation" evidence=ISO] [GO:0070933 "histone H4
            deacetylation" evidence=ISO] [GO:0090050 "positive regulation of
            cell migration involved in sprouting angiogenesis" evidence=ISO]
            Pfam:PF00850 RGD:1310748 INTERPRO:IPR000286 GO:GO:0016787
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 GeneTree:ENSGT00530000062809 IPI:IPI00765595
            Ensembl:ENSRNOT00000005521 Uniprot:F1MA74
        Length = 484

 Score = 231 (86.4 bits), Expect = 1.4e-16, P = 1.4e-16
 Identities = 72/261 (27%), Positives = 126/261 (48%)

Query:   136 HHAKKCEASGFCYINDLVLGILELLKYH--ARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 193
             HHA++  A GFC+ N + +    L      +++L +D+DVHHG+G ++AFY    ++ +S
Sbjct:   210 HHAEESAAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPSILYIS 269

Query:   194 FHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVET 248
              H++ +  FFPG+G   E+G   G+ Y +N+    G+D    D  +   F+T++  V   
Sbjct:   270 LHRYDEGNFFPGSGAPNEVGVGLGEGYNVNIAWTGGLDPPMGDVEYLEAFRTVVMPVARE 329

Query:   249 YAPGAIVLQCGADSLAGDR--LGCFNLSID----GH-AECVRFVKKFNLPLLVTGGGGYT 301
             + P  +++  G D+L G    LG + ++      GH  + +  +    + L + GG   T
Sbjct:   330 FDPDMVLVSAGFDALEGHTPPLGGYKVTAKCNGFGHLTKQLMTLANGRVALALEGGHDLT 389

Query:   302 KENVARCWTVETGI--LLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTI 359
                 A C   E  I  LL  E P  + E+   +      +  +    IE + SK Y  +I
Sbjct:   390 ----AICDASEACINALLGNE-PGSLEEDVLHQSVNTNAAASLQKT-IE-IQSK-YWKSI 441

Query:   360 KMQVLENLRSIQHAPSVQMQE 380
             KM  +    ++   P+ Q+QE
Sbjct:   442 KMVAVARGCAL---PASQLQE 459


>UNIPROTKB|Q9UBN7 [details] [associations]
            symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
            sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003779
            "actin binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0032041 "NAD-dependent histone
            deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] [GO:0000209 "protein polyubiquitination"
            evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
            [GO:0007026 "negative regulation of microtubule depolymerization"
            evidence=IEA] [GO:0043162 "ubiquitin-dependent protein catabolic
            process via the multivesicular body sorting pathway" evidence=IEA]
            [GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0048487
            "beta-tubulin binding" evidence=IEA] [GO:0071218 "cellular response
            to misfolded protein" evidence=IEA] [GO:0042903 "tubulin
            deacetylase activity" evidence=ISS;IDA] [GO:0042826 "histone
            deacetylase binding" evidence=IPI] [GO:0005737 "cytoplasm"
            evidence=ISS] [GO:0019899 "enzyme binding" evidence=ISS]
            [GO:0016575 "histone deacetylation" evidence=ISS;IDA] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0000118 "histone deacetylase complex" evidence=IDA] [GO:0005874
            "microtubule" evidence=IDA] [GO:0090042 "tubulin deacetylation"
            evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISS;IDA]
            [GO:0005829 "cytosol" evidence=ISS] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0008017 "microtubule binding" evidence=ISS;IDA]
            [GO:0004407 "histone deacetylase activity" evidence=IDA]
            [GO:0051879 "Hsp90 protein binding" evidence=IDA] [GO:0006476
            "protein deacetylation" evidence=IMP] [GO:0010870 "positive
            regulation of receptor biosynthetic process" evidence=IMP]
            [GO:0043242 "negative regulation of protein complex disassembly"
            evidence=IMP] [GO:0060632 "regulation of microtubule-based
            movement" evidence=IC] [GO:0048471 "perinuclear region of
            cytoplasm" evidence=IDA] [GO:0031252 "cell leading edge"
            evidence=IDA] [GO:0010634 "positive regulation of epithelial cell
            migration" evidence=IMP] [GO:0045861 "negative regulation of
            proteolysis" evidence=IMP] [GO:0008013 "beta-catenin binding"
            evidence=IPI] [GO:0070848 "response to growth factor stimulus"
            evidence=IMP] [GO:0016234 "inclusion body" evidence=IDA]
            [GO:0016236 "macroautophagy" evidence=IMP] [GO:0035967 "cellular
            response to topologically incorrect protein" evidence=IMP]
            [GO:0006886 "intracellular protein transport" evidence=IMP]
            [GO:0032418 "lysosome localization" evidence=IMP] [GO:0005875
            "microtubule associated complex" evidence=IDA] [GO:0043014
            "alpha-tubulin binding" evidence=IDA] [GO:0016235 "aggresome"
            evidence=IDA] [GO:0034983 "peptidyl-lysine deacetylation"
            evidence=IMP] [GO:0005901 "caveola" evidence=IDA] [GO:0043065
            "positive regulation of apoptotic process" evidence=IMP]
            [GO:0070301 "cellular response to hydrogen peroxide" evidence=IMP]
            [GO:0051354 "negative regulation of oxidoreductase activity"
            evidence=IC] [GO:0010727 "negative regulation of hydrogen peroxide
            metabolic process" evidence=IC] [GO:0070842 "aggresome assembly"
            evidence=IMP] [GO:0070845 "polyubiquitinated misfolded protein
            transport" evidence=IMP] [GO:0051788 "response to misfolded
            protein" evidence=IMP] [GO:0006515 "misfolded or incompletely
            synthesized protein catabolic process" evidence=IMP] [GO:0031593
            "polyubiquitin binding" evidence=IDA] [GO:0030286 "dynein complex"
            evidence=IDA] [GO:0010033 "response to organic substance"
            evidence=IMP] [GO:0009636 "response to toxic substance"
            evidence=IMP] [GO:0009967 "positive regulation of signal
            transduction" evidence=IMP] [GO:0010469 "regulation of receptor
            activity" evidence=IMP] [GO:0060765 "regulation of androgen
            receptor signaling pathway" evidence=TAS] [GO:0048156 "tau protein
            binding" evidence=IDA] [GO:0070846 "Hsp90 deacetylation"
            evidence=IMP] [GO:0090035 "positive regulation of
            chaperone-mediated protein complex assembly" evidence=IMP]
            [GO:0070840 "dynein complex binding" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IDA] InterPro:IPR001607 Pfam:PF02148
            PROSITE:PS50271 SMART:SM00290 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005829 GO:GO:0048471
            Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
            GO:GO:0045892 GO:GO:0005875 GO:GO:0031252 GO:GO:0010469
            GO:GO:0070301 GO:GO:0046872 GO:GO:0009636 GO:GO:0008270
            GO:GO:0045861 GO:GO:0006351 GO:GO:0019899 GO:GO:0043065
            GO:GO:0009967 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901
            GO:GO:0016235 GO:GO:0006515 GO:GO:0031593 GO:GO:0051879
            GO:GO:0008017 GO:GO:0005874 GO:GO:0000209 GO:GO:0060765
            Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0070848
            GO:GO:0005881 GO:GO:0007026 GO:GO:0016236 GO:GO:0010634
            GO:GO:0043014 GO:GO:0071218 GO:GO:0070932 GO:GO:0070933
            GO:GO:0000118 GO:GO:0090035 eggNOG:COG0123 KO:K11407 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0051788
            GO:GO:0043241 GO:GO:0043162 GO:GO:0070842 GO:GO:0048156
            EMBL:CH471224 GO:GO:0010870 EMBL:AF196971 GO:GO:0051354
            OrthoDB:EOG40P464 BRENDA:3.5.1.98 GO:GO:0004407 GO:GO:0042903
            HOGENOM:HOG000004769 DrugBank:DB02546 GO:GO:0034983 EMBL:AF132609
            EMBL:AB020708 EMBL:AJ011972 EMBL:BC013737 EMBL:BC069243
            IPI:IPI00005711 IPI:IPI00940882 RefSeq:NP_006035.2 UniGene:Hs.6764
            PDB:3C5K PDB:3GV4 PDB:3PHD PDBsum:3C5K PDBsum:3GV4 PDBsum:3PHD
            ProteinModelPortal:Q9UBN7 SMR:Q9UBN7 DIP:DIP-27544N IntAct:Q9UBN7
            MINT:MINT-238367 STRING:Q9UBN7 PhosphoSite:Q9UBN7 DMDM:205371758
            PaxDb:Q9UBN7 PRIDE:Q9UBN7 DNASU:10013 Ensembl:ENST00000334136
            Ensembl:ENST00000376619 GeneID:10013 KEGG:hsa:10013 UCSC:uc004dks.1
            CTD:10013 GeneCards:GC0XP048659 H-InvDB:HIX0016783 HGNC:HGNC:14064
            HPA:CAB004236 HPA:HPA003714 HPA:HPA026321 MIM:300272
            neXtProt:NX_Q9UBN7 Orphanet:163966 PharmGKB:PA29231
            HOVERGEN:HBG051894 InParanoid:Q9UBN7 PhylomeDB:Q9UBN7
            SABIO-RK:Q9UBN7 BindingDB:Q9UBN7 ChEMBL:CHEMBL1865 ChiTaRS:HDAC6
            EvolutionaryTrace:Q9UBN7 GenomeRNAi:10013 NextBio:37827
            ArrayExpress:Q9UBN7 Bgee:Q9UBN7 CleanEx:HS_HDAC6
            Genevestigator:Q9UBN7 GermOnline:ENSG00000094631 GO:GO:0070840
            GO:GO:0035967 GO:GO:0070846 GO:GO:0032418 GO:GO:0010727
            GO:GO:0043242 GO:GO:0070845 GO:GO:0060632 Uniprot:Q9UBN7
        Length = 1215

 Score = 237 (88.5 bits), Expect = 1.6e-16, P = 1.6e-16
 Identities = 82/304 (26%), Positives = 133/304 (43%)

Query:    23 NHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPD--TQ 80
             +HP  P R+      +    L  +     P  A   EL   HSA+YV  L R T    T+
Sbjct:   499 HHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAELLTCHSAEYVGHL-RATEKMKTR 557

Query:    81 HLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGL----H 136
              L R E + ++    CP   + F   Q+  G    A R +   L    +N A  +    H
Sbjct:   558 ELHR-ESSNFDSIYICP---STFACAQLATGA---ACRLVEAVLSGEVLNGAAVVRPPGH 610

Query:   137 HAKKCEASGFCYINDLVLGI--LELLKYHA-RVLYIDIDVHHGDGVEEAFYFTDRVMTVS 193
             HA++  A GFC+ N + +     + +  HA R+L +D DVHHG+G +  F     V+ VS
Sbjct:   611 HAEQDAACGFCFFNSVAVAARHAQTISGHALRILIVDWDVHHGNGTQHMFEDDPSVLYVS 670

Query:   194 FHKFGD-LFFP--GTGDVKEIGEREGKFYAINVPLKDG-IDDTSFTRLFKTIISKVVETY 249
              H++    FFP    G   +IG   G  + +NV      + D  +   +  ++  +   +
Sbjct:   671 LHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGPRMGDADYLAAWHRLVLPIAYEF 730

Query:   250 APGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF---NLPLLVTGGGGYTK--EN 304
              P  +++  G D+  GD LG   +S +G+A     +       + L++ GG   T   E+
Sbjct:   731 NPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLASGRIILILEGGYNLTSISES 790

Query:   305 VARC 308
             +A C
Sbjct:   791 MAAC 794

 Score = 182 (69.1 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 76/311 (24%), Positives = 128/311 (41%)

Query:    25 PMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFR 84
             P  P RL      ++   L  +   ++   A   EL   HS +Y++ +      TQ++  
Sbjct:   106 PEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMET----TQYMNE 161

Query:    85 QELTKY-NLGEDCPVFENLFEFCQIYAGGTI----DAARRLNNQLCD-IAINWAGGLHHA 138
              EL    +  +   +  N +  C   A G++    DA   L  ++ + +AI    G HHA
Sbjct:   162 GELRVLADTYDSVYLHPNSYS-CACLASGSVLRLVDAV--LGAEIRNGMAIIRPPG-HHA 217

Query:   139 KKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHK 196
             +     G+C  N + +      + H   RVL +D DVHHG G +  F     V+  S H+
Sbjct:   218 QHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHR 277

Query:   197 FGD-LFFPG--TGDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETYAPG 252
             +    F+P     +    G  +G+ Y INVP    G+ D  +   F  ++  V   + P 
Sbjct:   278 YEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFLHVLLPVALEFQPQ 337

Query:   253 AIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF-NLPLLVTGGGGYTKENVARCWTV 311
              +++  G D+L GD  G    +  G A+    +       L+++  GGY    +A   + 
Sbjct:   338 LVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILSLEGGYNLRALAEGVSA 397

Query:   312 ETGILLDTELP 322
                 LL    P
Sbjct:   398 SLHTLLGDPCP 408


>UNIPROTKB|Q9UKV0 [details] [associations]
            symbol:HDAC9 "Histone deacetylase 9" species:9606 "Homo
            sapiens" [GO:0032041 "NAD-dependent histone deacetylase activity
            (H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
            activity (H3-K18 specific)" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
            binding" evidence=IEA] [GO:0000118 "histone deacetylase complex"
            evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA;TAS] [GO:0030183
            "B cell differentiation" evidence=TAS] [GO:0006954 "inflammatory
            response" evidence=TAS] [GO:0042113 "B cell activation"
            evidence=TAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0035097
            "histone methyltransferase complex" evidence=ISS] [GO:0048742
            "regulation of skeletal muscle fiber development" evidence=ISS]
            [GO:0051153 "regulation of striated muscle cell differentiation"
            evidence=ISS] [GO:0005080 "protein kinase C binding" evidence=IPI]
            [GO:0008134 "transcription factor binding" evidence=IDA;IPI]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0007219 "Notch signaling
            pathway" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0070932 "histone H3 deacetylation" evidence=IDA] [GO:0070933
            "histone H4 deacetylation" evidence=IDA] [GO:0070491 "repressing
            transcription factor binding" evidence=ISS;IDA;IPI] [GO:0090050
            "positive regulation of cell migration involved in sprouting
            angiogenesis" evidence=IMP] [GO:0004407 "histone deacetylase
            activity" evidence=IDA] [GO:0042826 "histone deacetylase binding"
            evidence=IDA;IPI] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0033558 "protein
            deacetylase activity" evidence=IDA] [GO:0034983 "peptidyl-lysine
            deacetylation" evidence=IDA] [GO:0016575 "histone deacetylation"
            evidence=IDA] [GO:0007507 "heart development" evidence=ISS]
            [GO:0003714 "transcription corepressor activity" evidence=ISS]
            [GO:0005667 "transcription factor complex" evidence=IDA]
            [GO:0032869 "cellular response to insulin stimulus" evidence=IDA]
            InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005737
            Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
            GO:GO:0003714 GO:GO:0045892 GO:GO:0007507 GO:GO:0032869
            GO:GO:0046872 EMBL:CH471073 GO:GO:0006954 GO:GO:0007219
            GO:GO:0006351 GO:GO:0005667 GO:GO:0000122 GO:GO:0030183
            Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0042826
            GO:GO:0070932 GO:GO:0070933 GO:GO:0048742 GO:GO:0035097
            GO:GO:0000118 GO:GO:0070491 eggNOG:COG0123 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 Orphanet:708
            GO:GO:0090050 DrugBank:DB00313 BRENDA:3.5.1.98 GO:GO:0004407
            HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
            Pfam:PF12203 GO:GO:0034983 CleanEx:HS_HDAC7 EMBL:AY032737
            EMBL:AY032738 EMBL:AJ459808 EMBL:AY197371 EMBL:AB018287
            EMBL:AK304298 EMBL:AC002088 EMBL:AC002124 EMBL:AC002410
            EMBL:AC002433 EMBL:AC004744 EMBL:AC004994 EMBL:AC005249
            EMBL:AC010082 EMBL:AC074193 EMBL:AC091697 EMBL:BC111735
            EMBL:BC150328 EMBL:BC152405 EMBL:AF124924 IPI:IPI00215728
            IPI:IPI00215729 IPI:IPI00215730 IPI:IPI00232519 IPI:IPI00328781
            IPI:IPI00829837 IPI:IPI00829883 IPI:IPI00974194
            RefSeq:NP_001191073.1 RefSeq:NP_001191074.1 RefSeq:NP_001191075.1
            RefSeq:NP_001191076.1 RefSeq:NP_001191077.1 RefSeq:NP_055522.1
            RefSeq:NP_478056.1 RefSeq:NP_848510.1 RefSeq:NP_848512.1
            UniGene:Hs.196054 ProteinModelPortal:Q9UKV0 SMR:Q9UKV0
            IntAct:Q9UKV0 STRING:Q9UKV0 PhosphoSite:Q9UKV0 DMDM:19865267
            PaxDb:Q9UKV0 PRIDE:Q9UKV0 DNASU:9734 Ensembl:ENST00000401921
            Ensembl:ENST00000405010 Ensembl:ENST00000406451
            Ensembl:ENST00000417496 Ensembl:ENST00000432645
            Ensembl:ENST00000441542 GeneID:9734 KEGG:hsa:9734 UCSC:uc003sua.1
            UCSC:uc003sud.2 UCSC:uc003sue.3 UCSC:uc003suf.2 UCSC:uc003suh.3
            UCSC:uc011jyd.2 CTD:9734 GeneCards:GC07P018179 HGNC:HGNC:14065
            HPA:HPA028926 MIM:606543 neXtProt:NX_Q9UKV0 PharmGKB:PA38377
            InParanoid:Q9UKV0 KO:K11409 OMA:YGTNPLD BindingDB:Q9UKV0
            ChEMBL:CHEMBL4145 GenomeRNAi:9734 NextBio:36620 ArrayExpress:Q9UKV0
            Bgee:Q9UKV0 CleanEx:HS_HDAC9 Genevestigator:Q9UKV0
            GermOnline:ENSG00000048052 Uniprot:Q9UKV0
        Length = 1011

 Score = 236 (88.1 bits), Expect = 1.6e-16, P = 1.6e-16
 Identities = 67/232 (28%), Positives = 115/232 (49%)

Query:   136 HHAKKCEASGFCYINDLVLGILELLKYH--ARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 193
             HHA++  A GFC+ N + +    L      +++L +D+DVHHG+G ++AFY    ++ +S
Sbjct:   782 HHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPSILYIS 841

Query:   194 FHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVET 248
              H++ +  FFPG+G   E+G   G+ Y IN+    G+D    D  +   F+TI+  V + 
Sbjct:   842 LHRYDEGNFFPGSGAPNEVGTGLGEGYNINIAWTGGLDPPMGDVEYLEAFRTIVKPVAKE 901

Query:   249 YAPGAIVLQCGADSLAGDR--LGCFNLSID--GH-AECVRFVKKFNLPLLVTGGGGYTKE 303
             + P  +++  G D+L G    LG + ++    GH  + +  +    + L + GG   T  
Sbjct:   902 FDPDMVLVSAGFDALEGHTPPLGGYKVTAKCFGHLTKQLMTLADGRVVLALEGGHDLT-- 959

Query:   304 NVARCWTVETGILLDTELPNEI-PENEYIKYFAPECSLRIPNGHIENLNSKS 354
               A C   E  +  +  L NE+ P  E I + +P  +  I    I  + S S
Sbjct:   960 --AICDASEACV--NALLGNELEPLAEDILHQSPNMNAVISLQKIIEIQSMS 1007


>UNIPROTKB|B4DZH6 [details] [associations]
            symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
            sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0008270
            GO:GO:0016787 Gene3D:3.30.40.10 InterPro:IPR013083
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 EMBL:AF196971 HOGENOM:HOG000004769 IPI:IPI00005711
            UniGene:Hs.6764 HGNC:HGNC:14064 HOVERGEN:HBG051894 ChiTaRS:HDAC6
            EMBL:AK302926 ProteinModelPortal:B4DZH6 SMR:B4DZH6 STRING:B4DZH6
            PRIDE:B4DZH6 Ensembl:ENST00000444343 OMA:LQENWVC BindingDB:B4DZH6
            ArrayExpress:B4DZH6 Bgee:B4DZH6 Uniprot:B4DZH6
        Length = 1229

 Score = 237 (88.5 bits), Expect = 1.7e-16, P = 1.7e-16
 Identities = 82/304 (26%), Positives = 133/304 (43%)

Query:    23 NHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPD--TQ 80
             +HP  P R+      +    L  +     P  A   EL   HSA+YV  L R T    T+
Sbjct:   513 HHPEVPQRILRIMCRLEELGLAGRCLTLTPRPATEAELLTCHSAEYVGHL-RATEKMKTR 571

Query:    81 HLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGL----H 136
              L R E + ++    CP   + F   Q+  G    A R +   L    +N A  +    H
Sbjct:   572 ELHR-ESSNFDSIYICP---STFACAQLATGA---ACRLVEAVLSGEVLNGAAVVRPPGH 624

Query:   137 HAKKCEASGFCYINDLVLGI--LELLKYHA-RVLYIDIDVHHGDGVEEAFYFTDRVMTVS 193
             HA++  A GFC+ N + +     + +  HA R+L +D DVHHG+G +  F     V+ VS
Sbjct:   625 HAEQDAACGFCFFNSVAVAARHAQTISGHALRILIVDWDVHHGNGTQHMFEDDPSVLYVS 684

Query:   194 FHKFGD-LFFP--GTGDVKEIGEREGKFYAINVPLKDG-IDDTSFTRLFKTIISKVVETY 249
              H++    FFP    G   +IG   G  + +NV      + D  +   +  ++  +   +
Sbjct:   685 LHRYDHGTFFPMGDEGASSQIGRAAGTGFTVNVAWNGPRMGDADYLAAWHRLVLPIAYEF 744

Query:   250 APGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF---NLPLLVTGGGGYTK--EN 304
              P  +++  G D+  GD LG   +S +G+A     +       + L++ GG   T   E+
Sbjct:   745 NPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLASGRIILILEGGYNLTSISES 804

Query:   305 VARC 308
             +A C
Sbjct:   805 MAAC 808

 Score = 182 (69.1 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 76/311 (24%), Positives = 128/311 (41%)

Query:    25 PMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFR 84
             P  P RL      ++   L  +   ++   A   EL   HS +Y++ +      TQ++  
Sbjct:   120 PEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMET----TQYMNE 175

Query:    85 QELTKY-NLGEDCPVFENLFEFCQIYAGGTI----DAARRLNNQLCD-IAINWAGGLHHA 138
              EL    +  +   +  N +  C   A G++    DA   L  ++ + +AI    G HHA
Sbjct:   176 GELRVLADTYDSVYLHPNSYS-CACLASGSVLRLVDAV--LGAEIRNGMAIIRPPG-HHA 231

Query:   139 KKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHK 196
             +     G+C  N + +      + H   RVL +D DVHHG G +  F     V+  S H+
Sbjct:   232 QHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHR 291

Query:   197 FGD-LFFPG--TGDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETYAPG 252
             +    F+P     +    G  +G+ Y INVP    G+ D  +   F  ++  V   + P 
Sbjct:   292 YEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFLHVLLPVALEFQPQ 351

Query:   253 AIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF-NLPLLVTGGGGYTKENVARCWTV 311
              +++  G D+L GD  G    +  G A+    +       L+++  GGY    +A   + 
Sbjct:   352 LVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILSLEGGYNLRALAEGVSA 411

Query:   312 ETGILLDTELP 322
                 LL    P
Sbjct:   412 SLHTLLGDPCP 422


>ASPGD|ASPL0000014944 [details] [associations]
            symbol:hdaA species:162425 "Emericella nidulans"
            [GO:0004407 "histone deacetylase activity" evidence=IMP;IDA]
            [GO:0016575 "histone deacetylation" evidence=IMP;IDA] [GO:0006348
            "chromatin silencing at telomere" evidence=IMP] [GO:0034599
            "cellular response to oxidative stress" evidence=IMP] [GO:1900376
            "regulation of secondary metabolite biosynthetic process"
            evidence=IMP] [GO:1900197 "negative regulation of penicillin
            biosynthetic process" evidence=IMP] [GO:0042316 "penicillin
            metabolic process" evidence=IMP] [GO:0045460 "sterigmatocystin
            metabolic process" evidence=IMP] [GO:0010913 "regulation of
            sterigmatocystin biosynthetic process" evidence=IMP] [GO:0033553
            "rDNA heterochromatin" evidence=IEA] [GO:0031934 "mating-type
            region heterochromatin" evidence=IEA] [GO:0031933 "telomeric
            heterochromatin" evidence=IEA] [GO:0030874 "nucleolar chromatin"
            evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0005721
            "centromeric heterochromatin" evidence=IEA] [GO:0031078 "histone
            deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0030466
            "chromatin silencing at silent mating-type cassette" evidence=IEA]
            [GO:0071585 "detoxification of cadmium ion" evidence=IEA]
            [GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0030702
            "chromatin silencing at centromere" evidence=IEA] [GO:0000122
            "negative regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0031060 "regulation of histone
            methylation" evidence=IEA] [GO:0000183 "chromatin silencing at
            rDNA" evidence=IEA] [GO:0071276 "cellular response to cadmium ion"
            evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
            EMBL:BN001302 InterPro:IPR019154 Pfam:PF09757 OMA:IDPHPED
            Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
            PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270
            EnsemblFungi:CADANIAT00004063 Uniprot:C8V606
        Length = 766

 Score = 234 (87.4 bits), Expect = 1.8e-16, P = 1.8e-16
 Identities = 73/270 (27%), Positives = 123/270 (45%)

Query:    24 HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA--DYVEFLHR-----IT 76
             HP  P R+   +  +    L   +E  RP  A P++     +A  + +  +H        
Sbjct:   146 HPEDPRRIYYIYKELCRAGLVDDIESTRPLVARPLKRIHARNATEEEISLVHTAAHYAFV 205

Query:    77 PDTQHLFRQELTKYNLGEDCPVFENL-FEFCQIYAGGTID-----AARRLNNQLCDIAIN 130
               T+ +  +EL       D   F NL F    +  GG I+     A R++ N    IA+ 
Sbjct:   206 ESTKDMSDEELIALEHTRDSIYFNNLTFASSLLSVGGAIETCLAVATRKVKNA---IAVI 262

Query:   131 WAGGLHHAKKCEASGFCYINDLVLGIL---ELLKYHAR-VLYIDIDVHHGDGVEEAFYFT 186
                G HHA+  +  GFC  N++ +      + L    R ++ +D DVHHG+G+++AFY  
Sbjct:   263 RPPG-HHAEHDKTMGFCLFNNVSVAARVCQQRLGLSCRKIMILDWDVHHGNGIQKAFYDD 321

Query:   187 DRVMTVSFHKFGD-LFFPGT--GDVKEIGEREGKFYAINVPL-KDGIDDTSFTRLFKTII 242
               V+ +S H + +  F+PG   GD    G   G+   +N+P    G+ D  +   F  ++
Sbjct:   322 PNVLYISLHVYQNGSFYPGEKDGDADFCGAGAGEGKNVNIPWPSQGMGDGDYIYAFHQVV 381

Query:   243 SKVVETYAPGAIVLQCGADSLAGDRLG-CF 271
               + + + P  +++  G D+ AGD LG CF
Sbjct:   382 MPIAQEFDPDLVIIASGFDAAAGDTLGGCF 411


>TAIR|locus:2159461 [details] [associations]
            symbol:HDA18 "AT5G61070" species:3702 "Arabidopsis
            thaliana" [GO:0004407 "histone deacetylase activity"
            evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
            [GO:0016575 "histone deacetylation" evidence=ISS] [GO:0004402
            "histone acetyltransferase activity" evidence=ISS] [GO:0006338
            "chromatin remodeling" evidence=ISS] [GO:0045604 "regulation of
            epidermal cell differentiation" evidence=IMP] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0010053 "root epidermal cell
            differentiation" evidence=IMP] Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
            GO:GO:0006351 GO:GO:0006338 EMBL:AB006696 GO:GO:0070932
            GO:GO:0070933 HSSP:Q09013 eggNOG:COG0123 KO:K11407 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF510670
            IPI:IPI00530796 RefSeq:NP_200915.2 UniGene:At.29127
            ProteinModelPortal:Q8LRK8 SMR:Q8LRK8 STRING:Q8LRK8
            EnsemblPlants:AT5G61070.1 GeneID:836228 KEGG:ath:AT5G61070
            TAIR:At5g61070 InParanoid:Q8LRK8 OMA:AVRERLC PhylomeDB:Q8LRK8
            ProtClustDB:CLSN2915013 Genevestigator:Q8LRK8 GO:GO:0045604
            Uniprot:Q8LRK8
        Length = 682

 Score = 233 (87.1 bits), Expect = 1.9e-16, P = 1.9e-16
 Identities = 65/227 (28%), Positives = 111/227 (48%)

Query:   104 EFCQIYAGGTIDAARRL-NNQL-CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLK 161
             E   + AG  +  A ++   +L C  AI    G HHA+  EA GFC  N++ +    LL 
Sbjct:   157 EAAYLAAGSVVKVAEKVAEGELDCGFAIVRPPG-HHAESDEAMGFCLFNNVAVAASFLLN 215

Query:   162 YHA-----RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKF--GDLF-FPGTGDVKEIGE 213
                     ++L +D D+HHG+G ++ F+   RV+  S H+   G  + F   GD   +GE
Sbjct:   216 ERPDLDVKKILIVDWDIHHGNGTQKMFWKDSRVLIFSVHRHDHGSFYPFGDDGDFNMVGE 275

Query:   214 REGKFYAINVPLKDG-IDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFN 272
               G+ + INVP + G   D  +  ++  I+  V + + P  I+L  G D+  GD LG   
Sbjct:   276 GPGEGFNINVPWEQGGCGDADYLAVWNHILIPVTKEFKPDIILLSAGFDAAIGDPLGGCC 335

Query:   273 LSIDGHAECVRFVKKFNLPLLVTG-GGGYTKENVARCWTVETGILLD 318
             ++  G++  ++ + +F    +V    GGY  E++ +       +LL+
Sbjct:   336 VTPYGYSVMLKKLMEFAHGKIVLALEGGYNLESLGKSSLACVQVLLE 382


>UNIPROTKB|F1MQP3 [details] [associations]
            symbol:HDAC6 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0090035 "positive regulation of chaperone-mediated
            protein complex assembly" evidence=IEA] [GO:0071218 "cellular
            response to misfolded protein" evidence=IEA] [GO:0070848 "response
            to growth factor stimulus" evidence=IEA] [GO:0070846 "Hsp90
            deacetylation" evidence=IEA] [GO:0070845 "polyubiquitinated
            misfolded protein transport" evidence=IEA] [GO:0070842 "aggresome
            assembly" evidence=IEA] [GO:0070840 "dynein complex binding"
            evidence=IEA] [GO:0070301 "cellular response to hydrogen peroxide"
            evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
            [GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0048471
            "perinuclear region of cytoplasm" evidence=IEA] [GO:0048156 "tau
            protein binding" evidence=IEA] [GO:0045861 "negative regulation of
            proteolysis" evidence=IEA] [GO:0043241 "protein complex
            disassembly" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
            catabolic process via the multivesicular body sorting pathway"
            evidence=IEA] [GO:0043065 "positive regulation of apoptotic
            process" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
            evidence=IEA] [GO:0042903 "tubulin deacetylase activity"
            evidence=IEA] [GO:0042826 "histone deacetylase binding"
            evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
            evidence=IEA] [GO:0032418 "lysosome localization" evidence=IEA]
            [GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031252 "cell
            leading edge" evidence=IEA] [GO:0030286 "dynein complex"
            evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
            [GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
            regulation of receptor biosynthetic process" evidence=IEA]
            [GO:0010634 "positive regulation of epithelial cell migration"
            evidence=IEA] [GO:0010469 "regulation of receptor activity"
            evidence=IEA] [GO:0009967 "positive regulation of signal
            transduction" evidence=IEA] [GO:0009636 "response to toxic
            substance" evidence=IEA] [GO:0008017 "microtubule binding"
            evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
            [GO:0007026 "negative regulation of microtubule depolymerization"
            evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
            protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
            evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
            deacetylase activity" evidence=IEA] [GO:0000209 "protein
            polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
            complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
            GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
            GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
            GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
            GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
            GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
            GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
            GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
            GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC
            EMBL:DAAA02073075 EMBL:DAAA02073074 IPI:IPI00713432
            Ensembl:ENSBTAT00000017618 ArrayExpress:F1MQP3 Uniprot:F1MQP3
        Length = 1128

 Score = 236 (88.1 bits), Expect = 1.9e-16, P = 1.9e-16
 Identities = 80/310 (25%), Positives = 132/310 (42%)

Query:    24 HPMKPHRL-CMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHL 82
             HP  P R+  + HHL     L K+        A   EL   HSA+++E L          
Sbjct:   501 HPEMPQRIHFIMHHLD-ELGLAKRCHSLPARPATDAELL-CHSAEHLERLRATEKMKTRE 558

Query:    83 FRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL--NNQLCDIAINWAGGLHHAKK 140
              R+E   Y+    C    + F   Q+ AG        +     L  +A+    G HHA+ 
Sbjct:   559 LRREGANYDSIYIC---SSTFACAQLAAGAACRLVEAVLAGEVLNGVAVVRPPG-HHAEP 614

Query:   141 CEASGFCYINDLVLGI--LELLKYHA-RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKF 197
               A GFC+ N + +     + +  HA R+L +D D+HHG+G +  F     V+ +S H++
Sbjct:   615 DAACGFCFFNSVAVAARHAQAISGHALRILIVDWDIHHGNGTQHIFEEDPSVLYISLHRY 674

Query:   198 GD-LFFP--GTGDVKEIGEREGKFYAINVPLKDG-IDDTSFTRLFKTIISKVVETYAPGA 253
                 FFP    G    IG+  G  + +NV      + D  +   +  ++  V   + P  
Sbjct:   675 DHGTFFPMGNEGACTRIGKATGTGFTVNVAWNGPRMGDADYLAAWHRLVLPVAYEFNPEL 734

Query:   254 IVLQCGADSLAGDRLGCFNLSIDGHAECV-RFVKKFNLPLLVTGGGGYTKENVARCWTVE 312
             +++  G D+  GD LG   +S +G+A    + +   N  +++   GGY   +++      
Sbjct:   735 VLVSAGFDAARGDPLGGCQVSPEGYAHLTHQLMGLANGHIILILEGGYNLTSISESMAAC 794

Query:   313 TGILLDTELP 322
             T  LL   LP
Sbjct:   795 TRSLLGDPLP 804

 Score = 200 (75.5 bits), Expect = 1.9e-12, P = 1.9e-12
 Identities = 77/311 (24%), Positives = 133/311 (42%)

Query:    25 PMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFR 84
             P +P RL      ++   L  +   ++   A   EL   HS +Y++ +      TQ++  
Sbjct:   106 PERPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMET----TQYMNE 161

Query:    85 QEL-TKYNLGEDCPVFENLFEFCQIYAGGTI----DAARRLNNQLCD-IAINWAGGLHHA 138
             +EL    +  +   +  N +  C   A G++    DA   L  ++ + +AI    G HHA
Sbjct:   162 EELHVLADTYDSVYLHPNSYT-CACLASGSVLRLVDAV--LEAEIRNGMAIIRPPG-HHA 217

Query:   139 KKCEASGFCYINDLVLGILELLKYH--ARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHK 196
             +     G+C  N + +      + H   RVL +D DVHHG G++ AF     V+  S H+
Sbjct:   218 QHSLMDGYCMFNHVAVAARYAQQKHDIQRVLIVDWDVHHGQGIQFAFDQDPSVLYFSIHR 277

Query:   197 FGD-LFFPG--TGDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETYAPG 252
             +    F+P     +    G  +G+ Y INVP    G+ D  +   F  ++  V   + P 
Sbjct:   278 YEQGRFWPHLKASNWSTTGLGQGQGYTINVPWNQVGMQDADYIAAFLHVLLPVAFEFQPQ 337

Query:   253 AIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF-NLPLLVTGGGGYTKENVARCWTV 311
              +++  G D+L GD  G    +  G A+    +       L+++  GGY   ++A   + 
Sbjct:   338 LVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAEGKLILSLEGGYNLHSLAEGVSA 397

Query:   312 ETGILLDTELP 322
                 LL    P
Sbjct:   398 TLHTLLGDPCP 408


>UNIPROTKB|H9KZJ3 [details] [associations]
            symbol:HDAC10 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0016787 "hydrolase activity" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            GeneTree:ENSGT00530000062809 EMBL:AADN02057118 EMBL:AADN02057119
            Ensembl:ENSGALT00000014081 OMA:APCLSAI Uniprot:H9KZJ3
        Length = 615

 Score = 232 (86.7 bits), Expect = 2.0e-16, P = 2.0e-16
 Identities = 79/307 (25%), Positives = 144/307 (46%)

Query:    28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQEL 87
             P RL  ++  +  Y L ++       +    E+   HS++++E        TQ +  +EL
Sbjct:    30 PERLSASYEQLQCYHLVERCVPVPAREGSEEEILLVHSSEHLE----AAKSTQTMNEEEL 85

Query:    88 TKYNLGEDCPVFE-NLFEFCQIYAGGTIDAARR-LNNQLCD-IAINWAGGLHHAKKCEAS 144
              + +   D   F  N +   ++  G  +      ++ ++C+ +A+    G HH+++  A+
Sbjct:    86 KRISGNYDSFFFHPNTYHCARLAVGAALQLVDSVMSGKVCNGMALVRPPG-HHSQRNAAN 144

Query:   145 GFCYINDLVLGI-LELLKYHA-RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDL-F 201
             GFC  N++ +      LKY   R+L +D DVHHG G +  F     V+  S+H++    F
Sbjct:   145 GFCLFNNVAIAAEYAKLKYGLQRILIVDWDVHHGQGTQYIFEEDQSVLYFSWHRYEHQEF 204

Query:   202 FPGT--GDVKEIGEREGKFYAINVPL-KDGIDDTSFTRLFKTIISKVVETYAPGAIVLQC 258
             +P     D   +G  +GK + IN+P  K G+ ++ +   F  ++  V   + P  +++  
Sbjct:   205 WPSLKESDYDAVGLGKGKGFNINLPWNKVGMGNSDYLAAFFHVLLPVAFEFDPELVLVSS 264

Query:   259 GADSLAGDRLGCFNLSIDGHAECVRFVKKF-NLPLLVTGGGGYTKENVAR--CWTVETGI 315
             G DS  GD  G  N + +  A    F+ +  +  L V   GGY  ++++   C TV+T  
Sbjct:   265 GYDSGIGDPEGQMNATPEVFAHLTHFLMQLAHGKLCVILEGGYHLKSLSESVCMTVKT-- 322

Query:   316 LLDTELP 322
             LL   LP
Sbjct:   323 LLRDPLP 329


>ZFIN|ZDB-GENE-030131-5464 [details] [associations]
            symbol:hdac10 "histone deacetylase 10"
            species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
            evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
            ZFIN:ZDB-GENE-030131-5464 GO:GO:0016787 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            GeneTree:ENSGT00530000062809 EMBL:FP102808 IPI:IPI00499115
            Ensembl:ENSDART00000127600 ArrayExpress:F1QCV2 Bgee:F1QCV2
            Uniprot:F1QCV2
        Length = 728

 Score = 233 (87.1 bits), Expect = 2.1e-16, P = 2.1e-16
 Identities = 76/302 (25%), Positives = 143/302 (47%)

Query:    28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITP--DTQHLFRQ 85
             P RL +++  + ++ L ++ +     +A   E+   HS +Y+E + + TP  + + L   
Sbjct:    83 PERLTVSYEALRTHGLAQRCKAVPVRQATEQEILLAHSEEYLEAVKQ-TPGMNVEELMAF 141

Query:    86 ELTKYNLGEDCPVFENLFEFCQIYAGGT---IDAA--RRLNNQLCDIAINWAGGLHHAKK 140
                KYN   D    +N++   ++ AG T   +D+   R + N +    +   G  HH+++
Sbjct:   142 S-KKYN---DVYFHQNIYHCAKLAAGATLQLVDSVMKREVRNGMA--LVRPPG--HHSQR 193

Query:   141 CEASGFCYINDLVLGILELLK-YHA-RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFG 198
               A+GFC  N++ +  L   K Y+  R+L +D DVHHG G++  F     V+  S+H++ 
Sbjct:   194 SAANGFCVFNNVAIAALYAKKNYNLNRILIVDWDVHHGQGIQYCFEEDPSVLYFSWHRYE 253

Query:   199 -DLFFPGT--GDVKEIGEREGKFYAINVPL-KDGIDDTSFTRLFKTIISKVVETYAPGAI 254
                F+P     D   +G+ +G  + IN+P  K G+ ++ +   F  ++  V   + P  +
Sbjct:   254 HQSFWPNLPESDYSSVGKGKGSGFNINLPWNKVGMTNSDYLAAFFHVLLPVAYEFDPELV 313

Query:   255 VLQCGADSLAGDRLG--CFNLSIDGH-AECVRFVKKFNLPLLVTGGGGYTKENVARCWTV 311
             ++  G DS  GD  G  C    I  H    +  +    + +++ GG   T    + C TV
Sbjct:   314 IVSAGFDSAIGDPEGEMCALPEIFAHLTHLLMPLAAGKMCVVLEGGYNLTSLGQSVCQTV 373

Query:   312 ET 313
              +
Sbjct:   374 HS 375


>TIGR_CMR|CHY_0263 [details] [associations]
            symbol:CHY_0263 "histone deacetylase domain protein"
            species:246194 "Carboxydothermus hydrogenoformans Z-2901"
            [GO:0003824 "catalytic activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
            EMBL:CP000141 GenomeReviews:CP000141_GR eggNOG:COG0123
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_359135.1
            ProteinModelPortal:Q3AFE9 STRING:Q3AFE9 GeneID:3726436
            KEGG:chy:CHY_0263 PATRIC:21273699 OMA:DNHYTDP
            ProtClustDB:CLSK900467 BioCyc:CHYD246194:GJCN-264-MONOMER
            Uniprot:Q3AFE9
        Length = 433

 Score = 223 (83.6 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
 Identities = 62/202 (30%), Positives = 95/202 (47%)

Query:   108 IYAGGTIDAARR-LNNQLCD-IAINWAGGLHHAKKCEAS--GFCYINDLVLGI--LELLK 161
             I AG  I+ A R L  ++ +  A+    G HHA +      GFC IN++ + +  L  +K
Sbjct:    78 IAAGSCIELAERILAGEVKNGFALVRPPG-HHATRTVYGNRGFCNINNVAITVDYLRWVK 136

Query:   162 YHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAI 221
                ++  ID DVHHGDG ++ FY    V+ +S H+ G   +PGTG + E G        I
Sbjct:   137 GVKKIAIIDTDVHHGDGTQDIFYHDPDVLFISLHQDGRTLYPGTGFIDEAGTPNAYGTTI 196

Query:   222 NVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAEC 281
             N+PL  G  D     L +  +  ++E + P  I+   G D+   D L    ++  G+   
Sbjct:   197 NLPLPPGSGDEEILYLLEEAVLPILEEFQPEFIINSAGQDNHYSDPLARMAVTARGYGRI 256

Query:   282 VRFVKKFNLPLLVTGGGGYTKE 303
                +K    P L    GGY+ E
Sbjct:   257 TELIK----PDLAVLEGGYSIE 274

 Score = 44 (20.5 bits), Expect = 2.4e-16, Sum P(2) = 2.4e-16
 Identities = 15/59 (25%), Positives = 26/59 (44%)

Query:    22 PNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQ 80
             P HP +  RL  T   ++   +  ++  +  + A P ++        VE +H   PDTQ
Sbjct:    18 PTHPEREERLLYTRDQIMEEGI-LELPGFVEYSARPGKVED------VERVHLTIPDTQ 69


>UNIPROTKB|Q4KBB7 [details] [associations]
            symbol:PFL_3361 "Histone deacetylase family protein"
            species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000076
            GenomeReviews:CP000076_GR eggNOG:COG0123 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            HOGENOM:HOG000225183 RefSeq:YP_260466.1 ProteinModelPortal:Q4KBB7
            STRING:Q4KBB7 GeneID:3476137 KEGG:pfl:PFL_3361 PATRIC:19876051
            OMA:PGSYEIA ProtClustDB:CLSK868223
            BioCyc:PFLU220664:GIX8-3376-MONOMER Uniprot:Q4KBB7
        Length = 377

 Score = 225 (84.3 bits), Expect = 2.8e-16, P = 2.8e-16
 Identities = 70/255 (27%), Positives = 115/255 (45%)

Query:    91 NLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGL-HHAKKCEASGFCYI 149
             +LG++ PV    +E  Q+ AG  + A   + +   D A + +    HH  + +A GFC++
Sbjct:   101 HLGDEAPVGPGSYEIAQLSAGLAMAAVDAVLSGEADNAYSLSRPPGHHCTRDQAMGFCFL 160

Query:   150 NDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGD 207
              ++ + I      H   +V  ID DVHHG+G +  F     V+T+S H+ G  F PG G 
Sbjct:   161 ANIAIAIEAAKARHGLGKVAVIDWDVHHGNGTQSIFEERADVLTLSLHQDG-CFPPGYGG 219

Query:   208 VKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR 267
              ++ G   G    IN+PL  G    ++    + I+   +E + P  I++ CG D+ A D 
Sbjct:   220 EQDRGRGAGLGCNINIPLLPGSGHDAYLYAMQHIVIPALERFEPELIIVACGYDANAVDP 279

Query:   268 LGCFNLSIDGHAECVRFVKKF--NL---PLLVTGGGGYTKENVARCWTVETGILLDTELP 322
             L    L  D   E  + +K     L    L++   GGY++  V  C       L      
Sbjct:   280 LARMLLHSDSFREMTQCLKDAAERLCRGRLVLVHEGGYSEAYVPFCGLATLEALSGIRTA 339

Query:   323 NEIPENEYIKYFAPE 337
                P  E+++   P+
Sbjct:   340 VADPMLEFVRLQQPK 354


>UNIPROTKB|F1S1J4 [details] [associations]
            symbol:HDAC5 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0090051 "negative regulation of cell migration involved
            in sprouting angiogenesis" evidence=IEA] [GO:0070491 "repressing
            transcription factor binding" evidence=IEA] [GO:0051091 "positive
            regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045668 "negative regulation of osteoblast differentiation"
            evidence=IEA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IEA] [GO:0043393 "regulation of protein binding"
            evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
            [GO:0016604 "nuclear body" evidence=IEA] [GO:0010832 "negative
            regulation of myotube differentiation" evidence=IEA] [GO:0007507
            "heart development" evidence=IEA] [GO:0006950 "response to stress"
            evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005794
            "Golgi apparatus" evidence=IEA] [GO:0005080 "protein kinase C
            binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
            evidence=IEA] [GO:0003714 "transcription corepressor activity"
            evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005794 GO:GO:0003714
            GO:GO:0007507 GO:GO:0051091 GO:GO:0006950 GO:GO:0042220
            GO:GO:0045944 GO:GO:0043393 GO:GO:0000122 GO:GO:0044212
            GO:GO:0002076 GO:GO:0016604 GO:GO:0045668 GO:GO:0016575
            GO:GO:0010832 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            GeneTree:ENSGT00530000062809 GO:GO:0090051 EMBL:CU469063
            Ensembl:ENSSSCT00000018905 ArrayExpress:F1S1J4 Uniprot:F1S1J4
        Length = 662

 Score = 230 (86.0 bits), Expect = 3.8e-16, P = 3.8e-16
 Identities = 50/171 (29%), Positives = 90/171 (52%)

Query:   136 HHAKKCEASGFCYINDLVLG--ILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 193
             HHA++  A GFC+ N + +   +L+      +VL +D D+HHG+G ++AFY    V+ +S
Sbjct:   372 HHAEESTAMGFCFFNSVAITTKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYIS 431

Query:   194 FHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVET 248
              H++ +  FFPG+G  +E+G   G  Y +NV    G+D    D  +   F+T++  +   
Sbjct:   432 LHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHE 491

Query:   249 YAPGAIVLQCGADSLAGDRLGCFNLS-IDGHAECVRFVKKFNLPLLVTGGG 298
             ++P  +++  G D++ G      +LS + G++   R        L+   GG
Sbjct:   492 FSPDVVLVSAGFDAVEG------HLSPLGGYSVTARCFGHLTRQLMTLAGG 536


>WB|WBGene00018319 [details] [associations]
            symbol:hda-6 species:6239 "Caenorhabditis elegans"
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0033558 "protein
            deacetylase activity" evidence=ISS] InterPro:IPR001607 Pfam:PF02148
            PROSITE:PS50271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
            GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
            KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
            NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
            ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
            EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
            InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
        Length = 957

 Score = 232 (86.7 bits), Expect = 4.2e-16, P = 4.2e-16
 Identities = 101/424 (23%), Positives = 167/424 (39%)

Query:    22 PNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPH-KAYPVELAQFHSADYVEFLHRITPDTQ 80
             P HP    R+      +    + +K  +     +    +L   H    V+ L      TQ
Sbjct:    32 PTHPESSDRILKIKEALTKTKILEKCTVLTNFLEIDDADLEVTHDKSMVKDLMESEKKTQ 91

Query:    81 HLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL-CDIAINWAGGL---- 135
                  +  KY+      VF   F+     A   +   R L N++  + A N    +    
Sbjct:    92 EDINSQCEKYD-----SVFMTEFQNSMKVAKDGVACVRDLTNRIMANEASNGFAVVRPPG 146

Query:   136 HHAKKCEASGFCYINDLVLGILELLKYHA-RVLYIDIDVHHGDGVEEAFYFTDRVMTVSF 194
             HHA      GFC  N++     E     A R+L +D+DVHHG G +  FY   RV+  S 
Sbjct:   147 HHADSVSPCGFCLFNNVAQAAEEAFFSGAERILIVDLDVHHGHGTQRIFYDDKRVLYFSI 206

Query:   195 HKFGD-LFFPGT--GDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETYA 250
             H+    LF+P     D   IG  +G  Y  N+ L + G  D+ +  +   ++  +   + 
Sbjct:   207 HRHEHGLFWPHLPESDFDHIGSGKGLGYNANLALNETGCTDSDYLSIIFHVLLPLATQFD 266

Query:   251 PGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLP-LLVTGGGGYTKE----NV 305
             P  +++  G D+L GD LG   L+ DG++  +  +K      +LV   GGY  +     V
Sbjct:   267 PHFVIISAGFDALLGDPLGGMCLTPDGYSHILYHLKSLAQGRMLVVLEGGYNHQISAVAV 326

Query:   306 ARCWTVETGIL-LDTELPNEIPENEYIKYFAPECS-LRIPNGHIENLNSKSYLSTIKMQV 363
              RC  V  G      EL NE P+   +       S LR      +   S++ L   +  +
Sbjct:   327 QRCVRVLLGYAPFSIEL-NEAPKESTVDSCVSLVSVLRHHWNCFDYFPSRTSLRLAQWPI 385

Query:   364 LENLRSIQHAPSVQMQE----VPPDFYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEG 419
             +       + P+ +  +    +  +    EF   +  P E M+  T     + DD  ++ 
Sbjct:   386 VNTKVIYNYDPTTRRADTGEIIQDELASTEFTASDVIPTENME--TLIYFNEGDDAHFDL 443

Query:   420 DNDN 423
             + DN
Sbjct:   444 EEDN 447

 Score = 207 (77.9 bits), Expect = 2.6e-13, P = 2.6e-13
 Identities = 63/260 (24%), Positives = 120/260 (46%)

Query:   136 HHAKKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVS 193
             HHA   ++SGFC  N++ +      + H   RVL +D DVHHG+G +E FY    VM +S
Sbjct:   562 HHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDWDVHHGNGTQEIFYEDSNVMYMS 621

Query:   194 FHKF--GDLFFP-GTG-DVKEIGEREGKFYAINVPLKDGID--DTSFTRLFKTIISKVVE 247
              H+   G+ F+P G   D  ++GE  G+  ++NVP   G+   D  +   F+ +I  +  
Sbjct:   622 IHRHDKGN-FYPIGEPKDYSDVGEGAGEGMSVNVPFS-GVQMGDNEYQMAFQRVIMPIAY 679

Query:   248 TYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTG-GGGYTKENVA 306
              + P  +++  G D+   D LG + ++ +  A     +       ++T   GGY   +++
Sbjct:   680 QFNPDLVLISAGFDAAVDDPLGEYKVTPETFALMTYQLSSLAGGRIITVLEGGYNLTSIS 739

Query:   307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLEN 366
                     +L +  +   + E +  + FA +   +I +  I+ +     +  ++ +    
Sbjct:   740 NSAQAVCEVLQNRSMLRRLREEK--EQFATKPQ-KIESSCIKTIRE---VCAVQQKYWSI 793

Query:   367 LRSIQHAPSVQMQEVPPDFY 386
             L+  Q  PS    ++  + Y
Sbjct:   794 LKGFQVTPSNYGLDIDDEAY 813


>UNIPROTKB|A7LPD8 [details] [associations]
            symbol:hda-6 "Protein HDA-6, isoform c" species:6239
            "Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
            evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
            GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
            KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
            NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
            ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
            EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
            InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
        Length = 957

 Score = 232 (86.7 bits), Expect = 4.2e-16, P = 4.2e-16
 Identities = 101/424 (23%), Positives = 167/424 (39%)

Query:    22 PNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPH-KAYPVELAQFHSADYVEFLHRITPDTQ 80
             P HP    R+      +    + +K  +     +    +L   H    V+ L      TQ
Sbjct:    32 PTHPESSDRILKIKEALTKTKILEKCTVLTNFLEIDDADLEVTHDKSMVKDLMESEKKTQ 91

Query:    81 HLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL-CDIAINWAGGL---- 135
                  +  KY+      VF   F+     A   +   R L N++  + A N    +    
Sbjct:    92 EDINSQCEKYD-----SVFMTEFQNSMKVAKDGVACVRDLTNRIMANEASNGFAVVRPPG 146

Query:   136 HHAKKCEASGFCYINDLVLGILELLKYHA-RVLYIDIDVHHGDGVEEAFYFTDRVMTVSF 194
             HHA      GFC  N++     E     A R+L +D+DVHHG G +  FY   RV+  S 
Sbjct:   147 HHADSVSPCGFCLFNNVAQAAEEAFFSGAERILIVDLDVHHGHGTQRIFYDDKRVLYFSI 206

Query:   195 HKFGD-LFFPGT--GDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETYA 250
             H+    LF+P     D   IG  +G  Y  N+ L + G  D+ +  +   ++  +   + 
Sbjct:   207 HRHEHGLFWPHLPESDFDHIGSGKGLGYNANLALNETGCTDSDYLSIIFHVLLPLATQFD 266

Query:   251 PGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLP-LLVTGGGGYTKE----NV 305
             P  +++  G D+L GD LG   L+ DG++  +  +K      +LV   GGY  +     V
Sbjct:   267 PHFVIISAGFDALLGDPLGGMCLTPDGYSHILYHLKSLAQGRMLVVLEGGYNHQISAVAV 326

Query:   306 ARCWTVETGIL-LDTELPNEIPENEYIKYFAPECS-LRIPNGHIENLNSKSYLSTIKMQV 363
              RC  V  G      EL NE P+   +       S LR      +   S++ L   +  +
Sbjct:   327 QRCVRVLLGYAPFSIEL-NEAPKESTVDSCVSLVSVLRHHWNCFDYFPSRTSLRLAQWPI 385

Query:   364 LENLRSIQHAPSVQMQE----VPPDFYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEG 419
             +       + P+ +  +    +  +    EF   +  P E M+  T     + DD  ++ 
Sbjct:   386 VNTKVIYNYDPTTRRADTGEIIQDELASTEFTASDVIPTENME--TLIYFNEGDDAHFDL 443

Query:   420 DNDN 423
             + DN
Sbjct:   444 EEDN 447

 Score = 207 (77.9 bits), Expect = 2.6e-13, P = 2.6e-13
 Identities = 63/260 (24%), Positives = 120/260 (46%)

Query:   136 HHAKKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVS 193
             HHA   ++SGFC  N++ +      + H   RVL +D DVHHG+G +E FY    VM +S
Sbjct:   562 HHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDWDVHHGNGTQEIFYEDSNVMYMS 621

Query:   194 FHKF--GDLFFP-GTG-DVKEIGEREGKFYAINVPLKDGID--DTSFTRLFKTIISKVVE 247
              H+   G+ F+P G   D  ++GE  G+  ++NVP   G+   D  +   F+ +I  +  
Sbjct:   622 IHRHDKGN-FYPIGEPKDYSDVGEGAGEGMSVNVPFS-GVQMGDNEYQMAFQRVIMPIAY 679

Query:   248 TYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTG-GGGYTKENVA 306
              + P  +++  G D+   D LG + ++ +  A     +       ++T   GGY   +++
Sbjct:   680 QFNPDLVLISAGFDAAVDDPLGEYKVTPETFALMTYQLSSLAGGRIITVLEGGYNLTSIS 739

Query:   307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLEN 366
                     +L +  +   + E +  + FA +   +I +  I+ +     +  ++ +    
Sbjct:   740 NSAQAVCEVLQNRSMLRRLREEK--EQFATKPQ-KIESSCIKTIRE---VCAVQQKYWSI 793

Query:   367 LRSIQHAPSVQMQEVPPDFY 386
             L+  Q  PS    ++  + Y
Sbjct:   794 LKGFQVTPSNYGLDIDDEAY 813


>UNIPROTKB|E1C7C0 [details] [associations]
            symbol:HDAC9 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0003714 "transcription
            corepressor activity" evidence=IEA] [GO:0004407 "histone
            deacetylase activity" evidence=IEA] [GO:0005080 "protein kinase C
            binding" evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007507
            "heart development" evidence=IEA] [GO:0032869 "cellular response to
            insulin stimulus" evidence=IEA] [GO:0034983 "peptidyl-lysine
            deacetylation" evidence=IEA] [GO:0035097 "histone methyltransferase
            complex" evidence=IEA] [GO:0042826 "histone deacetylase binding"
            evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
            development" evidence=IEA] [GO:0070491 "repressing transcription
            factor binding" evidence=IEA] [GO:0070932 "histone H3
            deacetylation" evidence=IEA] [GO:0070933 "histone H4 deacetylation"
            evidence=IEA] [GO:0090050 "positive regulation of cell migration
            involved in sprouting angiogenesis" evidence=IEA]
            InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0032869
            GO:GO:0005667 GO:GO:0000122 GO:GO:0070932 GO:GO:0070933
            GO:GO:0048742 GO:GO:0035097 GO:GO:0000118 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050
            GO:GO:0004407 GeneTree:ENSGT00530000062809 InterPro:IPR024643
            Pfam:PF12203 GO:GO:0034983 OMA:YGTNPLD EMBL:AADN02000887
            EMBL:AADN02000888 EMBL:AADN02000889 EMBL:AADN02000890
            EMBL:AADN02000891 EMBL:AADN02000892 IPI:IPI00871071
            Ensembl:ENSGALT00000017640 ArrayExpress:E1C7C0 Uniprot:E1C7C0
        Length = 1069

 Score = 232 (86.7 bits), Expect = 5.0e-16, P = 5.0e-16
 Identities = 69/236 (29%), Positives = 118/236 (50%)

Query:   106 CQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELL-KYH- 163
             C I     + A+R L N     A+    G HHA++  A GFC+ N + +    L  K + 
Sbjct:   758 CVIELAARV-ASRELKN---GFAVVRPPG-HHAEESTAMGFCFFNSIAITAKYLRDKLNI 812

Query:   164 ARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGD-LFFPGTGDVKEIGEREGKFYAIN 222
              ++L +D+DVHHG+G ++AFY    ++ VS H++ +  FFPG+G   E+G   G+ + IN
Sbjct:   813 GKILIVDLDVHHGNGTQQAFYADPSILYVSLHRYDEGNFFPGSGAPNEVGSGPGEGFNIN 872

Query:   223 VPLKDGID----DTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR--LGCFNLSID 276
             +    G+D    D  +   F+T+I      + P  +++  G D++ G    LG + ++  
Sbjct:   873 IAWTGGLDPPMGDVEYLTAFRTVIMPAANEFDPEIVLVSAGFDAVEGHDPPLGGYKVTAK 932

Query:   277 --GHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGI--LLDTELPNEIPEN 328
               GH    + +K  +  +++   GG+  +  A C   E  I  LL  EL   +PE+
Sbjct:   933 CFGHLT-KQLLKLADGRVVLALEGGH--DLTAICDASEACINALLGNEL-EPLPED 984


>MGI|MGI:1333784 [details] [associations]
            symbol:Hdac5 "histone deacetylase 5" species:10090 "Mus
            musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IGI;ISO;IDA] [GO:0001046 "core
            promoter sequence-specific DNA binding" evidence=IDA] [GO:0001077
            "RNA polymerase II core promoter proximal region sequence-specific
            DNA binding transcription factor activity involved in positive
            regulation of transcription" evidence=IMP] [GO:0001085 "RNA
            polymerase II transcription factor binding" evidence=IPI]
            [GO:0002076 "osteoblast development" evidence=IMP] [GO:0003714
            "transcription corepressor activity" evidence=IGI;IDA] [GO:0004407
            "histone deacetylase activity" evidence=ISO;TAS] [GO:0005080
            "protein kinase C binding" evidence=ISO] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA;TAS]
            [GO:0005737 "cytoplasm" evidence=ISO;IDA;TAS] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006950 "response to stress"
            evidence=IMP] [GO:0006954 "inflammatory response" evidence=TAS]
            [GO:0007399 "nervous system development" evidence=TAS] [GO:0007507
            "heart development" evidence=IGI] [GO:0008134 "transcription factor
            binding" evidence=ISO;TAS;IPI] [GO:0010830 "regulation of myotube
            differentiation" evidence=IDA] [GO:0010832 "negative regulation of
            myotube differentiation" evidence=ISO] [GO:0016568 "chromatin
            modification" evidence=TAS] [GO:0016575 "histone deacetylation"
            evidence=ISO] [GO:0016604 "nuclear body" evidence=IDA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0019901 "protein kinase
            binding" evidence=IPI] [GO:0030183 "B cell differentiation"
            evidence=TAS] [GO:0031078 "histone deacetylase activity (H3-K14
            specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
            deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
            "histone deacetylase activity (H3-K9 specific)" evidence=IEA]
            [GO:0034739 "histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0042113 "B cell activation" evidence=TAS]
            [GO:0042220 "response to cocaine" evidence=IMP;IDA] [GO:0042493
            "response to drug" evidence=ISO] [GO:0043234 "protein complex"
            evidence=ISO] [GO:0043393 "regulation of protein binding"
            evidence=ISO] [GO:0045668 "negative regulation of osteoblast
            differentiation" evidence=IMP] [GO:0045843 "negative regulation of
            striated muscle tissue development" evidence=TAS] [GO:0045892
            "negative regulation of transcription, DNA-dependent"
            evidence=IDA;TAS] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0046872
            "metal ion binding" evidence=IEA] [GO:0046969 "NAD-dependent
            histone deacetylase activity (H3-K9 specific)" evidence=IEA]
            [GO:0046970 "NAD-dependent histone deacetylase activity (H4-K16
            specific)" evidence=IEA] [GO:0048742 "regulation of skeletal muscle
            fiber development" evidence=IGI] [GO:0051091 "positive regulation
            of sequence-specific DNA binding transcription factor activity"
            evidence=ISO] [GO:0051153 "regulation of striated muscle cell
            differentiation" evidence=IGI] [GO:0061333 "renal tubule
            morphogenesis" evidence=IMP] [GO:0070491 "repressing transcription
            factor binding" evidence=ISO] [GO:0071498 "cellular response to
            fluid shear stress" evidence=IDA] [GO:0090051 "negative regulation
            of cell migration involved in sprouting angiogenesis" evidence=ISO]
            [GO:2000179 "positive regulation of neural precursor cell
            proliferation" evidence=IMP] [GO:2000648 "positive regulation of
            stem cell proliferation" evidence=IMP] InterPro:IPR017320
            PIRSF:PIRSF037911 EMBL:AF006602 Pfam:PF00850 MGI:MGI:1333784
            INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0003714 GO:GO:0007399
            GO:GO:0007507 GO:GO:0046872 GO:GO:0042220 GO:GO:0006954
            GO:GO:0045843 GO:GO:0001077 GO:GO:0000122 GO:GO:0002076
            GO:GO:0030183 GO:GO:0008134 GO:GO:0016604 GO:GO:0045668
            GO:GO:2000179 GO:GO:0070932 GO:GO:0001046 GO:GO:0070933
            GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372
            GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830 GO:GO:2000648
            GO:GO:0071498 GO:GO:0004407 HOVERGEN:HBG057100 InterPro:IPR024643
            Pfam:PF12203 OrthoDB:EOG4DR9BQ ChiTaRS:HDAC5 EMBL:AF207748
            IPI:IPI00816951 UniGene:Mm.22665 ProteinModelPortal:Q9Z2V6
            SMR:Q9Z2V6 DIP:DIP-40855N IntAct:Q9Z2V6 STRING:Q9Z2V6
            PhosphoSite:Q9Z2V6 PaxDb:Q9Z2V6 PRIDE:Q9Z2V6 BindingDB:Q9Z2V6
            ChEMBL:CHEMBL2768 CleanEx:MM_HDAC5 Genevestigator:Q9Z2V6
            GermOnline:ENSMUSG00000008855 GO:GO:0061333 Uniprot:Q9Z2V6
        Length = 1113

 Score = 232 (86.7 bits), Expect = 5.2e-16, P = 5.2e-16
 Identities = 50/171 (29%), Positives = 91/171 (53%)

Query:   136 HHAKKCEASGFCYINDLVLG--ILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 193
             HHA++  A GFC+ N + +   +L+      +VL +D D+HHG+G ++AFY    V+ +S
Sbjct:   823 HHAEESTAMGFCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHGNGTQQAFYNDPSVLYIS 882

Query:   194 FHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVET 248
              H++ +  FFPG+G  +E+G   G  Y +NV    G+D    D  +   F+T++  + + 
Sbjct:   883 LHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAQE 942

Query:   249 YAPGAIVLQCGADSLAGDRLGCFNLS-IDGHAECVRFVKKFNLPLLVTGGG 298
             ++P  +++  G D++ G      +LS + G++   R        L+   GG
Sbjct:   943 FSPDVVLVSAGFDAVEG------HLSPLGGYSVTARCFGHLTRQLMTLAGG 987


>UNIPROTKB|F1LSE3 [details] [associations]
            symbol:Hdac6 "Protein Hdac6" species:10116 "Rattus
            norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001607
            Pfam:PF02148 PROSITE:PS50271 SMART:SM00290 Pfam:PF00850 RGD:619981
            INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471 GO:GO:0031252
            GO:GO:0010469 GO:GO:0070301 GO:GO:0009636 GO:GO:0008270
            GO:GO:0045861 GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235 GO:GO:0006515
            GO:GO:0000209 GO:GO:0070848 GO:GO:0005881 GO:GO:0007026
            GO:GO:0016236 GO:GO:0010634 GO:GO:0030286 GO:GO:0071218
            GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241 GO:GO:0043162
            GO:GO:0070842 GO:GO:0010870 GO:GO:0004407 GO:GO:0042903
            GO:GO:0034983 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
            IPI:IPI00200498 Ensembl:ENSRNOT00000009295 ArrayExpress:F1LSE3
            Uniprot:F1LSE3
        Length = 1155

 Score = 232 (86.7 bits), Expect = 5.5e-16, P = 5.5e-16
 Identities = 83/303 (27%), Positives = 135/303 (44%)

Query:    23 NHPMKPHRLC-MTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPD--T 79
             +HP  P R+  +  HL     L  +  I     A   EL   HSA+YVE L R T    T
Sbjct:   501 HHPETPQRILRIMCHLE-EVGLAARCLILPARPALDSELLTCHSAEYVERL-RATEKMKT 558

Query:    80 QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARR-LNNQLCD-IAINWAGGLHH 137
             + L R E   +     CP   + F   Q+  G         L+ ++ + IAI    G HH
Sbjct:   559 RDLHR-EGANFESIYICP---STFACAQLATGAACRLVEAVLSGEVLNGIAIVRPPG-HH 613

Query:   138 AKKCEASGFCYINDLVLGI--LELLKYHA-RVLYIDIDVHHGDGVEEAFYFTDRVMTVSF 194
             A+   A GFC+ N + +     +++   A R+L +D DVHHG+G +  F     V+ VS 
Sbjct:   614 AEPDAACGFCFFNSVAVAARHAQVIAGRALRILIVDWDVHHGNGTQHIFEEDPSVLYVSL 673

Query:   195 HKFG-DLFFP--GTGDVKEIGEREGKFYAINVPLKDG-IDDTSFTRLFKTIISKVVETYA 250
             H++    FFP    G   ++G   G  + +NVP     + D  +   +  ++  +   + 
Sbjct:   674 HRYDRGTFFPMGDEGASSQVGRAAGTGFTVNVPWNGPRMGDADYLATWHRLVLPIAYEFN 733

Query:   251 PGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF---NLPLLVTGGGGYTK--ENV 305
             P  +++  G D+  GD LG   ++ +G+A     +       + L++ GG   T   E++
Sbjct:   734 PELVLISAGFDAAQGDPLGGCQVTPEGYAHLTHLLMGLAGGRIILILEGGYNLTSISESM 793

Query:   306 ARC 308
             A C
Sbjct:   794 AAC 796

 Score = 187 (70.9 bits), Expect = 5.3e-11, P = 5.3e-11
 Identities = 79/301 (26%), Positives = 129/301 (42%)

Query:    25 PMKPHRL-CMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
             P  P RL  +   L+L   L + +  ++   A   EL   HS +Y++ +      TQ++ 
Sbjct:   105 PENPERLHAIKEQLILEGLLGRCVS-FQARFAEKEELMLVHSLEYIDLMET----TQYMN 159

Query:    84 RQELTKYNLGEDCPVFENLFEF-CQIYAGGTI----DAAR--RLNNQLCDIAINWAGGLH 136
               EL +   G    V+ +   + C   A G++    DA     + N +    I   G  H
Sbjct:   160 EGEL-RVLAGTYDSVYLHPNSYSCACLATGSVLRLVDAVMGAEIRNGMA--VIRPPG--H 214

Query:   137 HAKKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVSF 194
             HA++    G+C  N L +      K H   R+L +D DVHHG G +  F     V+  S 
Sbjct:   215 HAQRSLMDGYCMFNHLAVAARYAQKKHRIQRILIVDWDVHHGQGTQFIFDQDPSVLYFSI 274

Query:   195 HKFGD-LFFPG--TGDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETYA 250
             H++    F+P     +    G  +G+ Y INVP    G+ D  +   F  I+  V   + 
Sbjct:   275 HRYEHGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFLHILLPVAFEFQ 334

Query:   251 PGAIVLQCGADSLAGD---RLGCFNLSIDGHAECVRFVKKF-NLPLLVTGGGGYTKENVA 306
             P  +++  G D+L GD   R G  + +  G A    F+       L+++  GGY    +A
Sbjct:   335 PQLVLVAAGFDALHGDPKVRQGEMSATPAGFAHLTHFLMGLAGGKLILSLEGGYNLHALA 394

Query:   307 R 307
             +
Sbjct:   395 K 395


>UNIPROTKB|F1LQG9 [details] [associations]
            symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
            norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
            [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980
            INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            IPI:IPI00949172 Ensembl:ENSRNOT00000067488 ArrayExpress:F1LQG9
            Uniprot:F1LQG9
        Length = 826

 Score = 230 (86.0 bits), Expect = 5.6e-16, P = 5.6e-16
 Identities = 50/171 (29%), Positives = 90/171 (52%)

Query:   136 HHAKKCEASGFCYINDLVLG--ILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 193
             HHA++  A GFC+ N + +   +L+      +VL +D D+HHG+G ++AFY    V+ +S
Sbjct:   536 HHAEESTAMGFCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHGNGTQQAFYDDPSVLYIS 595

Query:   194 FHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVET 248
              H++ +  FFPG+G  +E+G   G  Y +NV    G+D    D  +   F+T++  +   
Sbjct:   596 LHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHE 655

Query:   249 YAPGAIVLQCGADSLAGDRLGCFNLS-IDGHAECVRFVKKFNLPLLVTGGG 298
             ++P  +++  G D++ G      +LS + G++   R        L+   GG
Sbjct:   656 FSPDVVLVSAGFDAVEG------HLSPLGGYSVTARCFGHLTRQLMTLAGG 700


>UNIPROTKB|F1LM64 [details] [associations]
            symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
            norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0002076 "osteoblast
            development" evidence=IEA] [GO:0003714 "transcription corepressor
            activity" evidence=IEA] [GO:0004407 "histone deacetylase activity"
            evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
            [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0006950 "response to stress" evidence=IEA]
            [GO:0007507 "heart development" evidence=IEA] [GO:0010832 "negative
            regulation of myotube differentiation" evidence=IEA] [GO:0016604
            "nuclear body" evidence=IEA] [GO:0042220 "response to cocaine"
            evidence=IEA] [GO:0043393 "regulation of protein binding"
            evidence=IEA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IEA] [GO:0045668 "negative regulation of
            osteoblast differentiation" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0070491 "repressing transcription factor binding" evidence=IEA]
            [GO:0090051 "negative regulation of cell migration involved in
            sprouting angiogenesis" evidence=IEA] InterPro:IPR017320
            PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980 INTERPRO:IPR000286
            GO:GO:0005829 GO:GO:0005794 GO:GO:0003714 GO:GO:0007507
            GO:GO:0051091 GO:GO:0006950 GO:GO:0042220 GO:GO:0045944
            GO:GO:0043393 GO:GO:0000122 GO:GO:0044212 GO:GO:0002076
            GO:GO:0016604 GO:GO:0045668 GO:GO:0016575 GO:GO:0010832
            GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            GeneTree:ENSGT00530000062809 GO:GO:0090051 IPI:IPI00778686
            Ensembl:ENSRNOT00000055187 ArrayExpress:F1LM64 Uniprot:F1LM64
        Length = 908

 Score = 230 (86.0 bits), Expect = 6.5e-16, P = 6.5e-16
 Identities = 50/171 (29%), Positives = 90/171 (52%)

Query:   136 HHAKKCEASGFCYINDLVLG--ILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 193
             HHA++  A GFC+ N + +   +L+      +VL +D D+HHG+G ++AFY    V+ +S
Sbjct:   618 HHAEESTAMGFCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHGNGTQQAFYDDPSVLYIS 677

Query:   194 FHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVET 248
              H++ +  FFPG+G  +E+G   G  Y +NV    G+D    D  +   F+T++  +   
Sbjct:   678 LHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHE 737

Query:   249 YAPGAIVLQCGADSLAGDRLGCFNLS-IDGHAECVRFVKKFNLPLLVTGGG 298
             ++P  +++  G D++ G      +LS + G++   R        L+   GG
Sbjct:   738 FSPDVVLVSAGFDAVEG------HLSPLGGYSVTARCFGHLTRQLMTLAGG 782


>UNIPROTKB|F1LSL9 [details] [associations]
            symbol:Hdac5 "Protein Hdac5" species:10116 "Rattus
            norvegicus" [GO:0000118 "histone deacetylase complex" evidence=IEA]
            [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 RGD:619980
            INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            IPI:IPI00207756 Ensembl:ENSRNOT00000028381 ArrayExpress:F1LSL9
            Uniprot:F1LSL9
        Length = 908

 Score = 230 (86.0 bits), Expect = 6.5e-16, P = 6.5e-16
 Identities = 50/171 (29%), Positives = 90/171 (52%)

Query:   136 HHAKKCEASGFCYINDLVLG--ILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 193
             HHA++  A GFC+ N + +   +L+      +VL +D D+HHG+G ++AFY    V+ +S
Sbjct:   618 HHAEESTAMGFCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHGNGTQQAFYDDPSVLYIS 677

Query:   194 FHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVET 248
              H++ +  FFPG+G  +E+G   G  Y +NV    G+D    D  +   F+T++  +   
Sbjct:   678 LHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHE 737

Query:   249 YAPGAIVLQCGADSLAGDRLGCFNLS-IDGHAECVRFVKKFNLPLLVTGGG 298
             ++P  +++  G D++ G      +LS + G++   R        L+   GG
Sbjct:   738 FSPDVVLVSAGFDAVEG------HLSPLGGYSVTARCFGHLTRQLMTLAGG 782


>UNIPROTKB|Q80ZH1 [details] [associations]
            symbol:HDAC5 "Histone deacetylase 5" species:10029
            "Cricetulus griseus" [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISS] [GO:0010830 "regulation of
            myotube differentiation" evidence=ISS] InterPro:IPR017320
            PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
            GO:GO:0005737 GO:GO:0006355 GO:GO:0046872 GO:GO:0006351
            GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830
            HSSP:Q70I53 HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203
            EMBL:AY145846 RefSeq:NP_001233710.1 ProteinModelPortal:Q80ZH1
            SMR:Q80ZH1 GeneID:100689350 CTD:10014 Uniprot:Q80ZH1
        Length = 1111

 Score = 231 (86.4 bits), Expect = 6.7e-16, P = 6.7e-16
 Identities = 50/171 (29%), Positives = 90/171 (52%)

Query:   136 HHAKKCEASGFCYINDLVLG--ILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 193
             HHA++  A GFC+ N + +   +L+      +VL +D D+HHG+G ++AFY    V+ +S
Sbjct:   821 HHAEESTAMGFCFFNSVAITAKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYDDPSVLYIS 880

Query:   194 FHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVET 248
              H++ +  FFPG+G  +E+G   G  Y +NV    G+D    D  +   F+T++  +   
Sbjct:   881 LHRYDNGNFFPGSGAPEEVGGGPGMGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHE 940

Query:   249 YAPGAIVLQCGADSLAGDRLGCFNLS-IDGHAECVRFVKKFNLPLLVTGGG 298
             ++P  +++  G D++ G      +LS + G++   R        L+   GG
Sbjct:   941 FSPDVVLVSAGFDAVEG------HLSPLGGYSVTARCFGHLTRQLMTLAGG 985


>MGI|MGI:1891835 [details] [associations]
            symbol:Hdac7 "histone deacetylase 7" species:10090 "Mus
            musculus" [GO:0000118 "histone deacetylase complex" evidence=TAS]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0001570 "vasculogenesis"
            evidence=IMP] [GO:0003682 "chromatin binding" evidence=IDA]
            [GO:0003714 "transcription corepressor activity" evidence=IDA]
            [GO:0004407 "histone deacetylase activity" evidence=TAS]
            [GO:0005080 "protein kinase C binding" evidence=ISO] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=ISO;TAS] [GO:0005737 "cytoplasm" evidence=ISO;TAS]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006954 "inflammatory response" evidence=TAS]
            [GO:0007043 "cell-cell junction assembly" evidence=IMP] [GO:0007399
            "nervous system development" evidence=TAS] [GO:0008134
            "transcription factor binding" evidence=TAS] [GO:0016568 "chromatin
            modification" evidence=TAS] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0019901 "protein kinase binding" evidence=ISO]
            [GO:0030183 "B cell differentiation" evidence=TAS] [GO:0031078
            "histone deacetylase activity (H3-K14 specific)" evidence=IEA]
            [GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
            specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
            (H3-K9 specific)" evidence=IEA] [GO:0032703 "negative regulation of
            interleukin-2 production" evidence=ISO] [GO:0033613 "activating
            transcription factor binding" evidence=ISO] [GO:0034739 "histone
            deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0042113
            "B cell activation" evidence=TAS] [GO:0045668 "negative regulation
            of osteoblast differentiation" evidence=ISO] [GO:0045843 "negative
            regulation of striated muscle tissue development" evidence=TAS]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IDA;TAS] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
            specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
            deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0070491
            "repressing transcription factor binding" evidence=ISO] [GO:0070932
            "histone H3 deacetylation" evidence=IEA] [GO:0070933 "histone H4
            deacetylation" evidence=IEA] [GO:0071889 "14-3-3 protein binding"
            evidence=ISO] [GO:0090050 "positive regulation of cell migration
            involved in sprouting angiogenesis" evidence=ISO]
            InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850 MGI:MGI:1891835
            INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0007399
            GO:GO:0046872 GO:GO:0006954 GO:GO:0006351 GO:GO:0003682
            GO:GO:0045843 GO:GO:0000122 GO:GO:0030183 GO:GO:0001570
            GO:GO:0008134 GO:GO:0007043 GO:GO:0045668 GO:GO:0071889
            GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
            GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050 GO:GO:0004407
            GeneTree:ENSGT00530000062809 HOGENOM:HOG000232065
            HOVERGEN:HBG057100 CTD:51564 KO:K11408 OrthoDB:EOG4NKBV4
            ChiTaRS:HDAC7 EMBL:AF207749 EMBL:AK030863 EMBL:AK036586
            EMBL:AK044287 EMBL:AK088828 EMBL:AK088945 EMBL:BC057332
            IPI:IPI00227380 IPI:IPI00315371 IPI:IPI00315372 IPI:IPI00315373
            IPI:IPI00315375 IPI:IPI00315376 RefSeq:NP_001191204.1
            RefSeq:NP_001191205.1 RefSeq:NP_001191206.1 RefSeq:NP_001191207.1
            RefSeq:NP_062518.2 UniGene:Mm.384027 ProteinModelPortal:Q8C2B3
            SMR:Q8C2B3 DIP:DIP-42594N IntAct:Q8C2B3 MINT:MINT-1551781
            STRING:Q8C2B3 PhosphoSite:Q8C2B3 PaxDb:Q8C2B3 PRIDE:Q8C2B3
            Ensembl:ENSMUST00000079838 Ensembl:ENSMUST00000088402
            Ensembl:ENSMUST00000116408 Ensembl:ENSMUST00000116409
            Ensembl:ENSMUST00000118294 GeneID:56233 KEGG:mmu:56233
            UCSC:uc007xld.1 UCSC:uc007xle.1 UCSC:uc007xlf.1 UCSC:uc007xlg.1
            UCSC:uc007xlh.1 UCSC:uc007xlj.1 OMA:AFRIVVM BindingDB:Q8C2B3
            ChEMBL:CHEMBL4219 NextBio:312136 PMAP-CutDB:Q8C2B3 Bgee:Q8C2B3
            CleanEx:MM_HDAC7 Genevestigator:Q8C2B3
            GermOnline:ENSMUSG00000022475 Uniprot:Q8C2B3
        Length = 938

 Score = 230 (86.0 bits), Expect = 6.9e-16, P = 6.9e-16
 Identities = 52/168 (30%), Positives = 89/168 (52%)

Query:   116 AARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYH--ARVLYIDIDV 173
             A+R L N     A+    G HHA    A GFC+ N + +   +L ++   +++L +D DV
Sbjct:   640 ASRELKN---GFAVVRPPG-HHADHSTAMGFCFFNSVAIACRQLQQHGKASKILIVDWDV 695

Query:   174 HHGDGVEEAFYFTDRVMTVSFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID-- 230
             HHG+G ++ FY    V+ +S H+  D  FFPG+G V E+G   G+ + +NV    G+D  
Sbjct:   696 HHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGTGSGEGFNVNVAWAGGLDPP 755

Query:   231 --DTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR--LGCFNLS 274
               D  +   F+ ++  +   +AP  +++  G D+  G    LG +++S
Sbjct:   756 MGDPEYLAAFRIVVMPIAREFAPDLVLVSAGFDAAEGHPAPLGGYHVS 803


>UNIPROTKB|Q5LQF5 [details] [associations]
            symbol:SPO2535 "Histone deacetylase/AcuC/AphA family
            protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
            GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
            RefSeq:YP_167750.1 ProteinModelPortal:Q5LQF5 GeneID:3194445
            KEGG:sil:SPO2535 PATRIC:23378475 OMA:NAYVLCR
            ProtClustDB:CLSK2767287 Uniprot:Q5LQF5
        Length = 371

 Score = 221 (82.9 bits), Expect = 7.7e-16, P = 7.7e-16
 Identities = 83/293 (28%), Positives = 122/293 (41%)

Query:    24 HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
             H   P       +LV +  L + +   RP +A    +   H   +++ L  +        
Sbjct:    43 HFENPETKRRLQNLVQATGLWEHLSHLRPKRAADEVIRMVHPQSHIDHLASVC------- 95

Query:    84 RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIA-INWAGGLHHAKKCE 142
               E    + GE  P      E  ++  GG I A   +     + A +      HHA    
Sbjct:    96 --ERGGGDAGELTPAGPASLEIARLAVGGVIVAMDAVMTGAAENAYVLCRPPGHHALPDL 153

Query:   143 ASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDL 200
             A GFC + +  LGI  + K +   R+  +D DVHHG+G E  F     V+T+S H+  D 
Sbjct:   154 AMGFCLLANAALGIRHVQKTYGLTRIAVVDWDVHHGNGTEAVFLDDPGVLTISLHQ--DN 211

Query:   201 FFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGA 260
              FP   D   IG +      INVPL  G    ++   F+ I+   ++ +AP  IVL CG 
Sbjct:   212 LFPL--DSGGIGVKGAGNSNINVPLPPGSGSGAYREAFEQIVIPALDAFAPELIVLPCGY 269

Query:   261 DSLAGDRLGCFNLSIDGHAECVRFV-----KKFNLPLLVTGGGGYTKENVARC 308
             D+ A D LG   LS +      R V     K     ++VT  GGY+   V  C
Sbjct:   270 DASAVDPLGVCMLSSEDFRWMTRQVMTLADKHCQGRIVVTHEGGYSPVYVPYC 322


>TIGR_CMR|SPO_2535 [details] [associations]
            symbol:SPO_2535 "histone deacetylase/AcuC/AphA family
            protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
            GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
            RefSeq:YP_167750.1 ProteinModelPortal:Q5LQF5 GeneID:3194445
            KEGG:sil:SPO2535 PATRIC:23378475 OMA:NAYVLCR
            ProtClustDB:CLSK2767287 Uniprot:Q5LQF5
        Length = 371

 Score = 221 (82.9 bits), Expect = 7.7e-16, P = 7.7e-16
 Identities = 83/293 (28%), Positives = 122/293 (41%)

Query:    24 HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
             H   P       +LV +  L + +   RP +A    +   H   +++ L  +        
Sbjct:    43 HFENPETKRRLQNLVQATGLWEHLSHLRPKRAADEVIRMVHPQSHIDHLASVC------- 95

Query:    84 RQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIA-INWAGGLHHAKKCE 142
               E    + GE  P      E  ++  GG I A   +     + A +      HHA    
Sbjct:    96 --ERGGGDAGELTPAGPASLEIARLAVGGVIVAMDAVMTGAAENAYVLCRPPGHHALPDL 153

Query:   143 ASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDL 200
             A GFC + +  LGI  + K +   R+  +D DVHHG+G E  F     V+T+S H+  D 
Sbjct:   154 AMGFCLLANAALGIRHVQKTYGLTRIAVVDWDVHHGNGTEAVFLDDPGVLTISLHQ--DN 211

Query:   201 FFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGA 260
              FP   D   IG +      INVPL  G    ++   F+ I+   ++ +AP  IVL CG 
Sbjct:   212 LFPL--DSGGIGVKGAGNSNINVPLPPGSGSGAYREAFEQIVIPALDAFAPELIVLPCGY 269

Query:   261 DSLAGDRLGCFNLSIDGHAECVRFV-----KKFNLPLLVTGGGGYTKENVARC 308
             D+ A D LG   LS +      R V     K     ++VT  GGY+   V  C
Sbjct:   270 DASAVDPLGVCMLSSEDFRWMTRQVMTLADKHCQGRIVVTHEGGYSPVYVPYC 322


>UNIPROTKB|Q9UQL6 [details] [associations]
            symbol:HDAC5 "Histone deacetylase 5" species:9606 "Homo
            sapiens" [GO:0032041 "NAD-dependent histone deacetylase activity
            (H3-K14 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
            activity (H3-K18 specific)" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
            binding" evidence=IEA] [GO:0002076 "osteoblast development"
            evidence=IEA] [GO:0003714 "transcription corepressor activity"
            evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0007507
            "heart development" evidence=IEA] [GO:0016604 "nuclear body"
            evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
            [GO:0045668 "negative regulation of osteoblast differentiation"
            evidence=IEA] [GO:0000118 "histone deacetylase complex"
            evidence=TAS] [GO:0042113 "B cell activation" evidence=TAS]
            [GO:0030183 "B cell differentiation" evidence=TAS] [GO:0006325
            "chromatin organization" evidence=TAS] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0016568 "chromatin modification"
            evidence=TAS] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=TAS] [GO:0006954 "inflammatory response"
            evidence=TAS] [GO:0005080 "protein kinase C binding" evidence=IPI]
            [GO:0010830 "regulation of myotube differentiation" evidence=ISS]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IMP;IDA] [GO:0006338 "chromatin
            remodeling" evidence=TAS] [GO:0006342 "chromatin silencing"
            evidence=TAS] [GO:0007219 "Notch signaling pathway" evidence=TAS]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016575 "histone
            deacetylation" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0010832 "negative regulation of myotube differentiation"
            evidence=IMP] [GO:0008134 "transcription factor binding"
            evidence=IPI] [GO:0051091 "positive regulation of sequence-specific
            DNA binding transcription factor activity" evidence=IMP]
            [GO:0070491 "repressing transcription factor binding" evidence=IPI]
            [GO:0004407 "histone deacetylase activity" evidence=IDA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IMP] [GO:0043393 "regulation of
            protein binding" evidence=IMP] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IDA] [GO:0032869 "cellular
            response to insulin stimulus" evidence=NAS] [GO:0090051 "negative
            regulation of cell migration involved in sprouting angiogenesis"
            evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005794
            "Golgi apparatus" evidence=IDA] InterPro:IPR017320
            PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
            GO:GO:0005794 Pathway_Interaction_DB:hdac_classii_pathway
            Reactome:REACT_111102 GO:GO:0003714 GO:GO:0007507 GO:GO:0051091
            GO:GO:0032869 GO:GO:0046872 GO:GO:0042220 GO:GO:0006954
            GO:GO:0045944 GO:GO:0043393 GO:GO:0007219 GO:GO:0006351
            GO:GO:0006338 GO:GO:0000122 GO:GO:0002076 GO:GO:0030183
            GO:GO:0006342 Pathway_Interaction_DB:hdac_classi_pathway
            GO:GO:0016604 GO:GO:0045668 GO:GO:0070932 GO:GO:0070933
            GO:GO:0010832 GO:GO:0000118 eggNOG:COG0123 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            KO:K11406 HOGENOM:HOG000232065 HOVERGEN:HBG057100
            InterPro:IPR024643 Pfam:PF12203 CTD:10014 EMBL:AF132608
            EMBL:AB011172 EMBL:AC023855 EMBL:BC013140 EMBL:BC051824
            EMBL:BX458255 EMBL:AF039691 EMBL:BK000028 IPI:IPI00217801
            IPI:IPI00328289 IPI:IPI00556288 RefSeq:NP_001015053.1
            RefSeq:NP_005465.2 UniGene:Hs.438782 ProteinModelPortal:Q9UQL6
            SMR:Q9UQL6 DIP:DIP-38260N IntAct:Q9UQL6 MINT:MINT-1407477
            STRING:Q9UQL6 PhosphoSite:Q9UQL6 DMDM:296434519 PRIDE:Q9UQL6
            Ensembl:ENST00000225983 Ensembl:ENST00000336057
            Ensembl:ENST00000393622 GeneID:10014 KEGG:hsa:10014 UCSC:uc002ifd.1
            UCSC:uc002iff.1 UCSC:uc010czp.1 GeneCards:GC17M042159
            H-InvDB:HIX0013862 HGNC:HGNC:14068 HPA:CAB019400 HPA:HPA030991
            MIM:605315 neXtProt:NX_Q9UQL6 PharmGKB:PA29230 InParanoid:Q9UQL6
            OMA:LGPYDSR OrthoDB:EOG4DR9BQ PhylomeDB:Q9UQL6 ChEMBL:CHEMBL2563
            ChiTaRS:HDAC5 GenomeRNAi:10014 NextBio:37831 Bgee:Q9UQL6
            CleanEx:HS_HDAC5 Genevestigator:Q9UQL6 GermOnline:ENSG00000108840
            GO:GO:0090051 Uniprot:Q9UQL6
        Length = 1122

 Score = 230 (86.0 bits), Expect = 8.9e-16, P = 8.9e-16
 Identities = 50/171 (29%), Positives = 90/171 (52%)

Query:   136 HHAKKCEASGFCYINDLVLG--ILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 193
             HHA++  A GFC+ N + +   +L+      +VL +D D+HHG+G ++AFY    V+ +S
Sbjct:   832 HHAEESTAMGFCFFNSVAITAKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYIS 891

Query:   194 FHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVET 248
              H++ +  FFPG+G  +E+G   G  Y +NV    G+D    D  +   F+T++  +   
Sbjct:   892 LHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHE 951

Query:   249 YAPGAIVLQCGADSLAGDRLGCFNLS-IDGHAECVRFVKKFNLPLLVTGGG 298
             ++P  +++  G D++ G      +LS + G++   R        L+   GG
Sbjct:   952 FSPDVVLVSAGFDAVEG------HLSPLGGYSVTARCFGHLTRQLMTLAGG 996


>UNIPROTKB|F1MNA5 [details] [associations]
            symbol:HDAC5 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0090051 "negative regulation of cell migration involved
            in sprouting angiogenesis" evidence=IEA] [GO:0070491 "repressing
            transcription factor binding" evidence=IEA] [GO:0051091 "positive
            regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045668 "negative regulation of osteoblast differentiation"
            evidence=IEA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IEA] [GO:0043393 "regulation of protein binding"
            evidence=IEA] [GO:0042220 "response to cocaine" evidence=IEA]
            [GO:0016604 "nuclear body" evidence=IEA] [GO:0010832 "negative
            regulation of myotube differentiation" evidence=IEA] [GO:0007507
            "heart development" evidence=IEA] [GO:0006950 "response to stress"
            evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005794
            "Golgi apparatus" evidence=IEA] [GO:0005080 "protein kinase C
            binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
            evidence=IEA] [GO:0003714 "transcription corepressor activity"
            evidence=IEA] [GO:0002076 "osteoblast development" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0000118 "histone
            deacetylase complex" evidence=IEA] InterPro:IPR017320
            PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829
            GO:GO:0005794 GO:GO:0003714 GO:GO:0007507 GO:GO:0051091
            GO:GO:0006950 GO:GO:0042220 GO:GO:0045944 GO:GO:0043393
            GO:GO:0000122 GO:GO:0044212 GO:GO:0002076 GO:GO:0016604
            GO:GO:0045668 GO:GO:0016575 GO:GO:0010832 GO:GO:0000118
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 GO:GO:0004407 GeneTree:ENSGT00530000062809
            InterPro:IPR024643 Pfam:PF12203 OMA:LGPYDSR GO:GO:0090051
            EMBL:DAAA02049241 IPI:IPI00968675 Ensembl:ENSBTAT00000061581
            Uniprot:F1MNA5
        Length = 1125

 Score = 230 (86.0 bits), Expect = 8.9e-16, P = 8.9e-16
 Identities = 50/171 (29%), Positives = 90/171 (52%)

Query:   136 HHAKKCEASGFCYINDLVLG--ILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 193
             HHA++  A GFC+ N + +   +L+      +VL +D D+HHG+G ++AFY    V+ +S
Sbjct:   835 HHAEESTAMGFCFFNSVAITTKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYIS 894

Query:   194 FHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVET 248
              H++ +  FFPG+G  +E+G   G  Y +NV    G+D    D  +   F+T++  +   
Sbjct:   895 LHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHE 954

Query:   249 YAPGAIVLQCGADSLAGDRLGCFNLS-IDGHAECVRFVKKFNLPLLVTGGG 298
             ++P  +++  G D++ G      +LS + G++   R        L+   GG
Sbjct:   955 FSPDVVLVSAGFDAVEG------HLSPLGGYSVTARCFGHLTRQLMTLAGG 999


>UNIPROTKB|J9P9N5 [details] [associations]
            symbol:HDAC5 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0004407 "histone deacetylase activity"
            evidence=IEA] [GO:0000118 "histone deacetylase complex"
            evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
            EMBL:AAEX03006427 EMBL:AAEX03006426 Ensembl:ENSCAFT00000042851
            Uniprot:J9P9N5
        Length = 1090

 Score = 229 (85.7 bits), Expect = 1.1e-15, P = 1.1e-15
 Identities = 50/171 (29%), Positives = 90/171 (52%)

Query:   136 HHAKKCEASGFCYINDLVLG--ILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 193
             HHA++  A GFC+ N + +   +L+      +VL +D D+HHG+G ++AFY    V+ +S
Sbjct:   800 HHAEESTAMGFCFFNSVAITTKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYIS 859

Query:   194 FHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVET 248
              H++ +  FFPG+G  +E+G   G  Y +NV    G+D    D  +   F+T++  +   
Sbjct:   860 LHRYDNGNFFPGSGAPEEVGGGPGIGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHE 919

Query:   249 YAPGAIVLQCGADSLAGDRLGCFNLS-IDGHAECVRFVKKFNLPLLVTGGG 298
             ++P  +++  G D++ G      +LS + G++   R        L+   GG
Sbjct:   920 FSPDVVLVSAGFDAVEG------HLSPLGGYSVTARCFGHLTRQLMTLAGG 964


>UNIPROTKB|F1P6I3 [details] [associations]
            symbol:HDAC5 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0004407 "histone deacetylase activity"
            evidence=IEA] [GO:0000118 "histone deacetylase complex"
            evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
            OMA:LGPYDSR EMBL:AAEX03006427 EMBL:AAEX03006426
            Ensembl:ENSCAFT00000022795 Uniprot:F1P6I3
        Length = 1117

 Score = 229 (85.7 bits), Expect = 1.1e-15, P = 1.1e-15
 Identities = 50/171 (29%), Positives = 90/171 (52%)

Query:   136 HHAKKCEASGFCYINDLVLG--ILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 193
             HHA++  A GFC+ N + +   +L+      +VL +D D+HHG+G ++AFY    V+ +S
Sbjct:   827 HHAEESTAMGFCFFNSVAITTKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYIS 886

Query:   194 FHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVET 248
              H++ +  FFPG+G  +E+G   G  Y +NV    G+D    D  +   F+T++  +   
Sbjct:   887 LHRYDNGNFFPGSGAPEEVGGGPGIGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHE 946

Query:   249 YAPGAIVLQCGADSLAGDRLGCFNLS-IDGHAECVRFVKKFNLPLLVTGGG 298
             ++P  +++  G D++ G      +LS + G++   R        L+   GG
Sbjct:   947 FSPDVVLVSAGFDAVEG------HLSPLGGYSVTARCFGHLTRQLMTLAGG 991


>UNIPROTKB|I3LEZ7 [details] [associations]
            symbol:HDAC6 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0090035 "positive regulation of chaperone-mediated
            protein complex assembly" evidence=IEA] [GO:0071218 "cellular
            response to misfolded protein" evidence=IEA] [GO:0070848 "response
            to growth factor stimulus" evidence=IEA] [GO:0070846 "Hsp90
            deacetylation" evidence=IEA] [GO:0070845 "polyubiquitinated
            misfolded protein transport" evidence=IEA] [GO:0070842 "aggresome
            assembly" evidence=IEA] [GO:0070840 "dynein complex binding"
            evidence=IEA] [GO:0070301 "cellular response to hydrogen peroxide"
            evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
            [GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0048471
            "perinuclear region of cytoplasm" evidence=IEA] [GO:0048156 "tau
            protein binding" evidence=IEA] [GO:0045861 "negative regulation of
            proteolysis" evidence=IEA] [GO:0043241 "protein complex
            disassembly" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
            catabolic process via the multivesicular body sorting pathway"
            evidence=IEA] [GO:0043065 "positive regulation of apoptotic
            process" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
            evidence=IEA] [GO:0042903 "tubulin deacetylase activity"
            evidence=IEA] [GO:0042826 "histone deacetylase binding"
            evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
            evidence=IEA] [GO:0032418 "lysosome localization" evidence=IEA]
            [GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031252 "cell
            leading edge" evidence=IEA] [GO:0030286 "dynein complex"
            evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
            [GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
            regulation of receptor biosynthetic process" evidence=IEA]
            [GO:0010634 "positive regulation of epithelial cell migration"
            evidence=IEA] [GO:0010469 "regulation of receptor activity"
            evidence=IEA] [GO:0009967 "positive regulation of signal
            transduction" evidence=IEA] [GO:0009636 "response to toxic
            substance" evidence=IEA] [GO:0008017 "microtubule binding"
            evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
            [GO:0007026 "negative regulation of microtubule depolymerization"
            evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
            protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
            evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
            deacetylase activity" evidence=IEA] [GO:0000209 "protein
            polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
            complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
            GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
            GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
            GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
            GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
            GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
            GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
            GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
            GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC EMBL:FP565308
            Ensembl:ENSSSCT00000022405 Uniprot:I3LEZ7
        Length = 1130

 Score = 229 (85.7 bits), Expect = 1.2e-15, P = 1.2e-15
 Identities = 83/326 (25%), Positives = 136/326 (41%)

Query:    11 YDGDVGSVY--FGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADY 68
             YD  +   Y  +  +HP  P R+      +    L  +        A   EL   HSA+Y
Sbjct:   494 YDQQMMDHYNLWDSHHPEMPQRILRIMRRLEELGLAGRCLALPARPATDAELLACHSAEY 553

Query:    69 VEFLHRITPD--TQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL--NNQL 124
             V  + R T    T+ L R E   Y+    CP     F   Q+ AG        +     L
Sbjct:   554 VSRI-RATEKMRTRELHR-EGANYDSIYICP---GTFACAQLAAGAACRLVEAVLAGEVL 608

Query:   125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGI--LELLKYHA-RVLYIDIDVHHGDGVEE 181
               IA+    G HHA++  A GFC+ N + +     + +  HA R+L +D DVHHG+G + 
Sbjct:   609 NGIAVVRPPG-HHAERDSACGFCFFNSVAVAARHAQAISGHALRILIVDWDVHHGNGTQH 667

Query:   182 AFYFTDRVMTVSFHKFGD-LFFP--GTGDVKEIGEREGKFYAINVPLKDG-IDDTSFTRL 237
              F     V+ +S H++    FFP    G   +IG+  G  + +NV      + D  +   
Sbjct:   668 LFEEDPSVLYISLHRYDHGTFFPMGDEGASSQIGQAAGTGFTVNVAWNGPRVGDPEYLAA 727

Query:   238 FKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF-NLPLLVTG 296
             +  ++  +   + P  +++  G D+  GD LG   +S + +A     +    N  +++  
Sbjct:   728 WHRLVLPIAYEFNPELVLVSAGFDAARGDPLGGCQVSPECYAHLTHLLMGLANGRIILIL 787

Query:   297 GGGYTKENVARCWTVETGILLDTELP 322
              GGY   +++      T  LL    P
Sbjct:   788 EGGYNLISISESMAACTRSLLGDSPP 813

 Score = 186 (70.5 bits), Expect = 6.7e-11, P = 6.7e-11
 Identities = 77/311 (24%), Positives = 129/311 (41%)

Query:    25 PMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFR 84
             P  P RL      ++   L  +   ++   A   EL   HS +Y++ +      TQ++  
Sbjct:   116 PEGPERLHAIKEQLMQEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMET----TQYMNE 171

Query:    85 QELTKY-NLGEDCPVFENLFEFCQIYAGGTI----DAARRLNNQLCD-IAINWAGGLHHA 138
              EL    +  +   +  N +  C   A G++    DA   L  ++ + +AI    G HHA
Sbjct:   172 GELRVLADTYDSVYLHPNSYT-CACLASGSVLRLVDAV--LGAEIRNGMAIIRPPG-HHA 227

Query:   139 KKCEASGFCYINDLVLGILELLKYH--ARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHK 196
             +     G+C  N + L      + H   RVL +D DVHHG G +  F     V+  S H+
Sbjct:   228 QHSLMDGYCMFNHVALAARYAQQKHDVQRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHR 287

Query:   197 FGD-LFFPG--TGDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETYAPG 252
             +    F+P     +    G  +G+ Y INVP    G+ D  +   F  ++  V   + P 
Sbjct:   288 YEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFLHLLLPVALEFQPQ 347

Query:   253 AIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF-NLPLLVTGGGGYTKENVARCWTV 311
              +++  G D+L GD  G    +  G A+    +       L+++  GGY   ++A   + 
Sbjct:   348 LVLVAAGFDALQGDPKGEMAATPAGFAQLTHLLMGLAGGKLILSLEGGYNLRSLAEGVSA 407

Query:   312 ETGILLDTELP 322
                 LL    P
Sbjct:   408 SLHTLLGDPCP 418


>UNIPROTKB|Q5R902 [details] [associations]
            symbol:HDAC5 "Histone deacetylase 5" species:9601 "Pongo
            abelii" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737 "cytoplasm"
            evidence=ISS] [GO:0010830 "regulation of myotube differentiation"
            evidence=ISS] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
            GO:GO:0046872 GO:GO:0006351 GO:GO:0070932 GO:GO:0070933
            GO:GO:0000118 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0010830 HSSP:Q70I53
            HOGENOM:HOG000232065 HOVERGEN:HBG057100 InterPro:IPR024643
            Pfam:PF12203 EMBL:CR859595 UniGene:Pab.17810
            ProteinModelPortal:Q5R902 SMR:Q5R902 InParanoid:Q5R902
            Uniprot:Q5R902
        Length = 1122

 Score = 228 (85.3 bits), Expect = 1.5e-15, P = 1.5e-15
 Identities = 50/171 (29%), Positives = 90/171 (52%)

Query:   136 HHAKKCEASGFCYINDLVLG--ILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 193
             HHA++  A GFC+ N + +   +L+      +VL +D D+HHG+G ++AFY    V+ +S
Sbjct:   832 HHAEESTAMGFCFFNSVAITAKLLQQKLNVGKVLIVDWDIHHGNGTQQAFYNDPSVLYIS 891

Query:   194 FHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISKVVET 248
              H++ +  FFPG+G  +E+G   G  Y +NV    G+D    D  +   F+T++  +   
Sbjct:   892 LHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWIGGVDPPIGDVEYLTAFRTVVMPIAHE 951

Query:   249 YAPGAIVLQCGADSLAGDRLGCFNLS-IDGHAECVRFVKKFNLPLLVTGGG 298
             ++P  +++  G D++ G      +LS + G++   R        L+   GG
Sbjct:   952 FSPDVVLVSAGFDAVEG------HLSPLGGYSVTARCFGHLTRQLMTLAGG 996


>WB|WBGene00001837 [details] [associations]
            symbol:hda-4 species:6239 "Caenorhabditis elegans"
            [GO:0040011 "locomotion" evidence=IMP] [GO:0040015 "negative
            regulation of multicellular organism growth" evidence=IMP]
            [GO:0040010 "positive regulation of growth rate" evidence=IMP]
            [GO:0040032 "post-embryonic body morphogenesis" evidence=IMP]
            [GO:0040007 "growth" evidence=IMP] [GO:0016575 "histone
            deacetylation" evidence=ISS] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            [GO:0045664 "regulation of neuron differentiation" evidence=IMP]
            [GO:0016568 "chromatin modification" evidence=ISS] [GO:0006915
            "apoptotic process" evidence=ISS] [GO:0006974 "response to DNA
            damage stimulus" evidence=ISS] [GO:0007243 "intracellular protein
            kinase cascade" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS;IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0000118
            "histone deacetylase complex" evidence=ISS] [GO:0004407 "histone
            deacetylase activity" evidence=ISS] [GO:0008134 "transcription
            factor binding" evidence=IPI] [GO:0003714 "transcription
            corepressor activity" evidence=ISS] [GO:0005516 "calmodulin
            binding" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0003714
            GO:GO:0006915 GO:GO:0045664 GO:GO:0040011 GO:GO:0007243
            GO:GO:0006351 GO:GO:0006974 GO:GO:0000122 GO:GO:0005516
            GO:GO:0040015 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
            eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0040032 GO:GO:0004407
            GeneTree:ENSGT00530000062809 EMBL:FO080490 EMBL:FO080492 PIR:T32425
            RefSeq:NP_001257278.1 RefSeq:NP_001257279.1
            ProteinModelPortal:O17323 MINT:MINT-4299370 STRING:O17323
            PaxDb:O17323 EnsemblMetazoa:C10E2.3b GeneID:181723
            KEGG:cel:CELE_C10E2.3 UCSC:C10E2.3 CTD:181723 WormBase:C10E2.3a
            WormBase:C10E2.3b HOGENOM:HOG000112870 KO:K11406 OMA:NGFACIR
            NextBio:915090 ArrayExpress:O17323 Uniprot:O17323
        Length = 869

 Score = 226 (84.6 bits), Expect = 1.7e-15, P = 1.7e-15
 Identities = 54/181 (29%), Positives = 98/181 (54%)

Query:   136 HHAKKCEASGFCYINDLVLGILEL-LKYHA---RVLYIDIDVHHGDGVEEAFYFTDRVMT 191
             HHA+  +A GFC+ N++ + +  L  KY A   ++  ID DVHHG+G + +F     V+ 
Sbjct:   607 HHAEHEQAMGFCFFNNVAVAVKVLQTKYPAQCAKIAIIDWDVHHGNGTQLSFENDPNVLY 666

Query:   192 VSFHKF--GDLFFPGTGDVKEIGEREGKFYAINVPLK-DGIDDTSFTRLFKTIISKVVET 248
             +S H+   G+ FFPGTG V E+G+ + K   +NVP   D + D  +   ++T+I  V+ +
Sbjct:   667 MSLHRHDKGN-FFPGTGSVTEVGKNDAKGLTVNVPFSGDVMRDPEYLAAWRTVIEPVMAS 725

Query:   249 YAPGAIVLQCGADSLAG--DRLGCFNLSIDGHAECVRFVKKFNLPLLVTG-GGGYTKENV 305
             + P  I++  G D+  G  + LG + ++ +      + +  +    +V    GGY  +++
Sbjct:   726 FCPDFIIVSAGFDACHGHPNALGGYEVTPEMFGYMTKSLLNYASGKVVLALEGGYDLKSI 785

Query:   306 A 306
             +
Sbjct:   786 S 786


>UNIPROTKB|F1N616 [details] [associations]
            symbol:HDAC7 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0090050 "positive regulation of cell migration involved
            in sprouting angiogenesis" evidence=IEA] [GO:0071889 "14-3-3
            protein binding" evidence=IEA] [GO:0070491 "repressing
            transcription factor binding" evidence=IEA] [GO:0045668 "negative
            regulation of osteoblast differentiation" evidence=IEA] [GO:0033613
            "activating transcription factor binding" evidence=IEA] [GO:0032703
            "negative regulation of interleukin-2 production" evidence=IEA]
            [GO:0007043 "cell-cell junction assembly" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0005080 "protein kinase C binding"
            evidence=IEA] [GO:0003714 "transcription corepressor activity"
            evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
            [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0004407 "histone deacetylase activity"
            evidence=IEA] [GO:0000118 "histone deacetylase complex"
            evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0003714 GO:GO:0003682
            GO:GO:0000122 GO:GO:0001570 GO:GO:0007043 GO:GO:0045668
            GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050
            GO:GO:0004407 GeneTree:ENSGT00530000062809 CTD:51564 KO:K11408
            OMA:AFRIVVM EMBL:DAAA02012987 IPI:IPI00718577 RefSeq:NP_001180070.1
            UniGene:Bt.2919 Ensembl:ENSBTAT00000038321 GeneID:509843
            KEGG:bta:509843 NextBio:20869160 Uniprot:F1N616
        Length = 988

 Score = 226 (84.6 bits), Expect = 2.1e-15, P = 2.1e-15
 Identities = 56/192 (29%), Positives = 98/192 (51%)

Query:   116 AARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYH--ARVLYIDIDV 173
             A+R L N     A+    G HHA    A GFC+ N + +   +L +    +++L +D DV
Sbjct:   689 ASRELKN---GFAVVRPPG-HHADHSTAMGFCFFNSVAIACRQLQQQGKASKILIVDWDV 744

Query:   174 HHGDGVEEAFYFTDRVMTVSFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID-- 230
             HHG+G ++ FY    V+ +S H+  D  FFPG+G V E+G   G+ + +NV    G+D  
Sbjct:   745 HHGNGTQQTFYQDPNVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPP 804

Query:   231 --DTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR--LGCFNLSIDGHAECVRFVK 286
               D  +   F+ ++  +   ++P  +++  G D+  G    LG +++S    A+C  ++ 
Sbjct:   805 MGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPPPLGGYHVS----AKCFGYMT 860

Query:   287 KFNLPLLVTGGG 298
             +    L+   GG
Sbjct:   861 Q---QLMSLAGG 869


>UNIPROTKB|H9KZE7 [details] [associations]
            symbol:H9KZE7 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000118 "histone deacetylase complex"
            evidence=IEA] [GO:0004407 "histone deacetylase activity"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0001570
            "vasculogenesis" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0003714 "transcription corepressor activity"
            evidence=IEA] [GO:0005080 "protein kinase C binding" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007043 "cell-cell
            junction assembly" evidence=IEA] [GO:0032703 "negative regulation
            of interleukin-2 production" evidence=IEA] [GO:0033613 "activating
            transcription factor binding" evidence=IEA] [GO:0045668 "negative
            regulation of osteoblast differentiation" evidence=IEA] [GO:0070491
            "repressing transcription factor binding" evidence=IEA] [GO:0071889
            "14-3-3 protein binding" evidence=IEA] [GO:0090050 "positive
            regulation of cell migration involved in sprouting angiogenesis"
            evidence=IEA] InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            GeneTree:ENSGT00530000062809 OMA:AFRIVVM EMBL:AADN02072408
            EMBL:AADN02072409 EMBL:AADN02072410 Ensembl:ENSGALT00000010204
            Uniprot:H9KZE7
        Length = 951

 Score = 225 (84.3 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
 Identities = 56/192 (29%), Positives = 97/192 (50%)

Query:   116 AARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYH--ARVLYIDIDV 173
             A+R L N     A+    G HHA    A GFC+ N + +   +L +    +++L +D DV
Sbjct:   652 ASRELKN---GFAVVRPPG-HHADPSTAMGFCFFNSVAIAARQLQQKGKLSKILIVDWDV 707

Query:   174 HHGDGVEEAFYFTDRVMTVSFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID-- 230
             HHG+G ++ FY    V+ +S H+  D  FFPG+G   E+G   G+ + +N+    G+D  
Sbjct:   708 HHGNGTQQIFYRDPDVLYISLHRHDDGNFFPGSGAADEVGAGPGEGFNVNIAWTGGLDPP 767

Query:   231 --DTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR--LGCFNLSIDGHAECVRFVK 286
               D  +   F+T++  +   ++P  +++  G D+  G    LG + +S    A+C  ++ 
Sbjct:   768 MGDPEYLAAFRTVVMPIAHEFSPDVVLVSAGFDAADGHPPPLGGYKVS----AKCFGYMT 823

Query:   287 KFNLPLLVTGGG 298
             K    L+   GG
Sbjct:   824 K---QLMSLAGG 832

 Score = 46 (21.3 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
 Identities = 29/113 (25%), Positives = 41/113 (36%)

Query:    23 NHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHL 82
             NHP    R+      +    L  + E  R  KA   EL   H+  +V FL+   P    L
Sbjct:   539 NHPEHAGRIQSIWSRLQERGLRSQCECLRGRKATLEELQCVHTERHV-FLYGTNP----L 593

Query:    83 FRQELTKYNLGEDCPVFENLFEFCQIYAGGT-IDAARRLNNQLCDIAINWAGG 134
              R +L     G+   +      F  +  GG  +D+    N      A  WA G
Sbjct:   594 NRLKLDN---GKLAGILSQRM-FVMLPCGGVGVDSDTIWNELHSSNAARWAAG 642


>ZFIN|ZDB-GENE-061013-95 [details] [associations]
            symbol:hdac4 "histone deacetylase 4" species:7955
            "Danio rerio" [GO:0004407 "histone deacetylase activity"
            evidence=IEA] [GO:0000118 "histone deacetylase complex"
            evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0090299
            "regulation of neural crest formation" evidence=IMP] [GO:0048701
            "embryonic cranial skeleton morphogenesis" evidence=IMP]
            [GO:0001755 "neural crest cell migration" evidence=IMP]
            InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
            INTERPRO:IPR000286 ZFIN:ZDB-GENE-061013-95 GO:GO:0001755
            GO:GO:0048701 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            HOVERGEN:HBG057100 InterPro:IPR024643 Pfam:PF12203 EMBL:DQ268531
            IPI:IPI00800150 UniGene:Dr.104588 ProteinModelPortal:Q2VC82
            SMR:Q2VC82 STRING:Q2VC82 InParanoid:Q2VC82 ArrayExpress:Q2VC82
            GO:GO:0090299 Uniprot:Q2VC82
        Length = 1023

 Score = 226 (84.6 bits), Expect = 2.2e-15, P = 2.2e-15
 Identities = 84/331 (25%), Positives = 146/331 (44%)

Query:    24 HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
             HP    R+      +    L  + E  R  KA   EL   HS  +V  L+   P  Q L 
Sbjct:   620 HPEHAGRIQSIWSRLQETGLRGQCECIRGRKATLEELQTVHSEAHV-LLYGTNPLRQKLD 678

Query:    84 RQELTKY------NLGEDCPVFENLFEF---CQIYAGGTIDAARRL-NNQLCD-IAINWA 132
                   +       +G D     N        ++  G  +D   ++ + +L +  A+   
Sbjct:   679 SSVTPMFVRLPCGGIGVDSDTIWNEVHSSSAARLAVGSVVDLVFKVASGELRNGFAVVRP 738

Query:   133 GGLHHAKKCEASGFCYINDLVLGILELLKYH---ARVLYIDIDVHHGDGVEEAFYFTDRV 189
              G HHA++    GFCY N + +   +LL+     +++L +D DVHHG+G ++AFY    V
Sbjct:   739 PG-HHAEESTPMGFCYFNSVAIAA-KLLQQRLNVSKILIVDWDVHHGNGTQQAFYSDPNV 796

Query:   190 MTVSFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTIISK 244
             + +S H++ D  FFPG+G   E+G   G  + +N+    G++    D  +   F +++  
Sbjct:   797 LYLSLHRYDDGNFFPGSGAPDEVGIGPGVGFNVNMAFTGGLEPPMGDADYLAAFTSVVMP 856

Query:   245 VVETYAPGAIVLQCGADSLAGDR--LGCFNLSIDGHAECVRFVKKFNLPL----LVTG-G 297
             +   ++P  +++  G D++ G    LG + L+    A+C  ++ K  + L    LV    
Sbjct:   857 IANEFSPDVVLVSSGFDAVEGHPPPLGGYKLT----AKCFGYLTKQLMGLAGGRLVLALE 912

Query:   298 GGYTKENVARCWTVETGILLDTELPNEIPEN 328
             GG+    +          LL  EL + IPE+
Sbjct:   913 GGHDLTAICDASEACVSALLGNEL-DPIPED 942


>UNIPROTKB|G4NCI1 [details] [associations]
            symbol:MGG_01076 "Histone deacetylase HDA1" species:242507
            "Magnaporthe oryzae 70-15" [GO:0000118 "histone deacetylase
            complex" evidence=ISS] [GO:0000183 "chromatin silencing at rDNA"
            evidence=ISS] [GO:0000790 "nuclear chromatin" evidence=ISS]
            [GO:0004407 "histone deacetylase activity" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0006348 "chromatin
            silencing at telomere" evidence=ISS] [GO:0016575 "histone
            deacetylation" evidence=ISS] [GO:0030466 "chromatin silencing at
            silent mating-type cassette" evidence=ISS] [GO:0030702 "chromatin
            silencing at centromere" evidence=ISS] [GO:0030874 "nucleolar
            chromatin" evidence=ISS] [GO:0031060 "regulation of histone
            methylation" evidence=ISS] [GO:0031078 "histone deacetylase
            activity (H3-K14 specific)" evidence=ISS] [GO:0032129 "histone
            deacetylase activity (H3-K9 specific)" evidence=ISS] [GO:0070932
            "histone H3 deacetylation" evidence=ISS] Pfam:PF00850
            INTERPRO:IPR000286 EMBL:CM001235 GO:GO:0030466 GO:GO:0030702
            GO:GO:0000183 GO:GO:0006348 InterPro:IPR019154 Pfam:PF09757
            GO:GO:0000118 GO:GO:0030874 GO:GO:0031060 KO:K11407 GO:GO:0031078
            Gene3D:3.40.800.20 InterPro:IPR023801 InterPro:IPR017321
            PANTHER:PTHR10625 PIRSF:PIRSF037919 PRINTS:PR01270 GO:GO:0032129
            RefSeq:XP_003717862.1 ProteinModelPortal:G4NCI1
            EnsemblFungi:MGG_01076T0 GeneID:2674943 KEGG:mgr:MGG_01076
            Uniprot:G4NCI1
        Length = 758

 Score = 224 (83.9 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
 Identities = 71/234 (30%), Positives = 114/234 (48%)

Query:    59 ELAQFHSADYVEFLHRI-TPDTQHLFRQELTK-YNLGEDCPVFENL-FEFCQIYAGGTID 115
             E+   H A + +++  + T  T  L R  LTK  + G+      +L FE   I AGG I+
Sbjct:   155 EICLVHYAKHYDWVKELSTKPTAQLRR--LTKELDKGQTSVYVGSLTFEASLISAGGAIE 212

Query:   116 AARRL-NNQLCD-IAINWAGGLHHAKKCEASGFCYINDLVLGI----LELLKYHARVLYI 169
               + + + Q+ +  A+    G HHA++  A GFC  N++ +       E  +   +VL +
Sbjct:   213 TCKSIVSGQIKNGFAVIRPPG-HHAEQDSAMGFCIFNNVPIAAKVCQAEYPEICQKVLIL 271

Query:   170 DIDVHHGDGVEEAFYFTDRVMTVSFH--KFGDLFFPGT--------GDVKEIGEREGKFY 219
             D DVHHG+G++  FY    V+ +S H  K G+ F+PG         G +   G   G   
Sbjct:   272 DWDVHHGNGIQNVFYEDPNVLYISLHVYKNGE-FYPGKPENPMTADGSISSCGSGPGLGR 330

Query:   220 AINVPLKD-GIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG-CF 271
              IN+   D G+ D  +   F+ II  +   + P  +++  G D+ AGD+LG CF
Sbjct:   331 NINIGWDDQGMGDGEYIAAFQKIIMPIAHEFNPDLVIISAGFDAAAGDQLGGCF 384

 Score = 44 (20.5 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
 Identities = 9/27 (33%), Positives = 15/27 (55%)

Query:     5 DKISYFYDGDVGSVYFGPNHPMKPHRL 31
             D++    + D G+   GP+HP  P R+
Sbjct:    87 DRMKLHANADFGA---GPHHPEDPSRI 110


>UNIPROTKB|Q8WUI4 [details] [associations]
            symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
            sapiens" [GO:0000118 "histone deacetylase complex" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0032041
            "NAD-dependent histone deacetylase activity (H3-K14 specific)"
            evidence=IEA] [GO:0046969 "NAD-dependent histone deacetylase
            activity (H3-K9 specific)" evidence=IEA] [GO:0046970 "NAD-dependent
            histone deacetylase activity (H4-K16 specific)" evidence=IEA]
            [GO:0097372 "NAD-dependent histone deacetylase activity (H3-K18
            specific)" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0001570 "vasculogenesis" evidence=IEA] [GO:0003682 "chromatin
            binding" evidence=IEA] [GO:0003714 "transcription corepressor
            activity" evidence=IEA] [GO:0007043 "cell-cell junction assembly"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0045668 "negative regulation of
            osteoblast differentiation" evidence=IMP] [GO:0005080 "protein
            kinase C binding" evidence=IPI] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0071889 "14-3-3 protein binding" evidence=IDA]
            [GO:0019901 "protein kinase binding" evidence=IPI] [GO:0033613
            "activating transcription factor binding" evidence=IPI] [GO:0007219
            "Notch signaling pathway" evidence=TAS] [GO:0090050 "positive
            regulation of cell migration involved in sprouting angiogenesis"
            evidence=IMP] [GO:0070491 "repressing transcription factor binding"
            evidence=IPI] [GO:0032703 "negative regulation of interleukin-2
            production" evidence=IDA] InterPro:IPR017320 PIRSF:PIRSF037911
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737
            Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
            GO:GO:0003714 GO:GO:0046872 Pathway_Interaction_DB:hif1_tfpathway
            GO:GO:0007219 GO:GO:0006351 GO:GO:0003682 EMBL:CH471111
            GO:GO:0000122 GO:GO:0001570 GO:GO:0007043
            Pathway_Interaction_DB:ar_tf_pathway
            Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0045668
            GO:GO:0071889 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
            eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050
            BRENDA:3.5.1.98 HOVERGEN:HBG057100 EMBL:AF239243 EMBL:AY302468
            EMBL:AY321367 EMBL:BT009771 EMBL:AK001032 EMBL:AK001190
            EMBL:AK024469 EMBL:AK027781 EMBL:AK122588 EMBL:AK128383
            EMBL:AK299292 EMBL:AK301545 EMBL:AK303481 EMBL:AC004466
            EMBL:BC006453 EMBL:BC020505 EMBL:BC064840 EMBL:AL117455
            IPI:IPI00306189 IPI:IPI00386808 IPI:IPI00743474 IPI:IPI00909569
            IPI:IPI00916348 IPI:IPI00916470 IPI:IPI00916810 IPI:IPI00917034
            IPI:IPI00944518 IPI:IPI00944634 PIR:T17245 RefSeq:NP_001091886.1
            RefSeq:NP_056216.2 UniGene:Hs.200063 PDB:3C0Y PDB:3C0Z PDB:3C10
            PDBsum:3C0Y PDBsum:3C0Z PDBsum:3C10 ProteinModelPortal:Q8WUI4
            SMR:Q8WUI4 DIP:DIP-29860N IntAct:Q8WUI4 MINT:MINT-3089050
            STRING:Q8WUI4 PhosphoSite:Q8WUI4 DMDM:30913097 PaxDb:Q8WUI4
            PRIDE:Q8WUI4 DNASU:51564 Ensembl:ENST00000080059
            Ensembl:ENST00000354334 Ensembl:ENST00000427332
            Ensembl:ENST00000552960 GeneID:51564 KEGG:hsa:51564 UCSC:uc001rqe.3
            UCSC:uc001rqj.4 UCSC:uc001rqk.4 UCSC:uc010slo.2 CTD:51564
            GeneCards:GC12M048176 H-InvDB:HIX0129669 HGNC:HGNC:14067
            HPA:HPA004775 MIM:606542 neXtProt:NX_Q8WUI4 PharmGKB:PA162390579
            InParanoid:Q8WUI4 KO:K11408 OrthoDB:EOG4NKBV4 PhylomeDB:Q8WUI4
            BindingDB:Q8WUI4 ChEMBL:CHEMBL2716 ChiTaRS:HDAC7
            EvolutionaryTrace:Q8WUI4 GenomeRNAi:51564 NextBio:55370
            PMAP-CutDB:Q8WUI4 ArrayExpress:Q8WUI4 Bgee:Q8WUI4 CleanEx:HS_HDAC7
            Genevestigator:Q8WUI4 GermOnline:ENSG00000061273 Uniprot:Q8WUI4
        Length = 952

 Score = 225 (84.3 bits), Expect = 2.5e-15, P = 2.5e-15
 Identities = 51/168 (30%), Positives = 88/168 (52%)

Query:   116 AARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYH--ARVLYIDIDV 173
             A+R L N     A+    G HHA    A GFC+ N + +   +L +    +++L +D DV
Sbjct:   653 ASRELKN---GFAVVRPPG-HHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDV 708

Query:   174 HHGDGVEEAFYFTDRVMTVSFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID-- 230
             HHG+G ++ FY    V+ +S H+  D  FFPG+G V E+G   G+ + +NV    G+D  
Sbjct:   709 HHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPP 768

Query:   231 --DTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR--LGCFNLS 274
               D  +   F+ ++  +   ++P  +++  G D+  G    LG +++S
Sbjct:   769 MGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVS 816


>UNIPROTKB|J3KPH8 [details] [associations]
            symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
            sapiens" [GO:0000118 "histone deacetylase complex" evidence=IEA]
            [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0016575 GO:GO:0000118 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            EMBL:AC004466 HGNC:HGNC:14067 ChiTaRS:HDAC7 OMA:AFRIVVM
            ProteinModelPortal:J3KPH8 Ensembl:ENST00000380610 Uniprot:J3KPH8
        Length = 1014

 Score = 225 (84.3 bits), Expect = 2.8e-15, P = 2.8e-15
 Identities = 51/168 (30%), Positives = 88/168 (52%)

Query:   116 AARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYH--ARVLYIDIDV 173
             A+R L N     A+    G HHA    A GFC+ N + +   +L +    +++L +D DV
Sbjct:   709 ASRELKN---GFAVVRPPG-HHADHSTAMGFCFFNSVAIACRQLQQQSKASKILIVDWDV 764

Query:   174 HHGDGVEEAFYFTDRVMTVSFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID-- 230
             HHG+G ++ FY    V+ +S H+  D  FFPG+G V E+G   G+ + +NV    G+D  
Sbjct:   765 HHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPP 824

Query:   231 --DTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR--LGCFNLS 274
               D  +   F+ ++  +   ++P  +++  G D+  G    LG +++S
Sbjct:   825 MGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVS 872


>MGI|MGI:1333752 [details] [associations]
            symbol:Hdac6 "histone deacetylase 6" species:10090 "Mus
            musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
            [GO:0000209 "protein polyubiquitination" evidence=IDA] [GO:0003779
            "actin binding" evidence=IEA] [GO:0004407 "histone deacetylase
            activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0005874 "microtubule" evidence=ISO] [GO:0005875 "microtubule
            associated complex" evidence=ISO] [GO:0005881 "cytoplasmic
            microtubule" evidence=IDA] [GO:0005901 "caveola" evidence=ISO]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006476 "protein deacetylation" evidence=ISO;IDA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IGI;IMP] [GO:0006515 "misfolded or incompletely
            synthesized protein catabolic process" evidence=ISO] [GO:0006886
            "intracellular protein transport" evidence=ISO] [GO:0007026
            "negative regulation of microtubule depolymerization" evidence=IDA]
            [GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0008017
            "microtubule binding" evidence=ISO;IDA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0009636 "response to toxic substance"
            evidence=ISO] [GO:0009967 "positive regulation of signal
            transduction" evidence=ISO] [GO:0010033 "response to organic
            substance" evidence=ISO] [GO:0010469 "regulation of receptor
            activity" evidence=ISO] [GO:0010634 "positive regulation of
            epithelial cell migration" evidence=ISO] [GO:0010870 "positive
            regulation of receptor biosynthetic process" evidence=ISO]
            [GO:0016234 "inclusion body" evidence=ISO] [GO:0016235 "aggresome"
            evidence=ISO] [GO:0016236 "macroautophagy" evidence=ISO]
            [GO:0016568 "chromatin modification" evidence=IEA] [GO:0016575
            "histone deacetylation" evidence=ISO] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0031078 "histone deacetylase activity
            (H3-K14 specific)" evidence=IEA] [GO:0031252 "cell leading edge"
            evidence=ISO] [GO:0031593 "polyubiquitin binding" evidence=ISO]
            [GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
            specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
            (H3-K9 specific)" evidence=IEA] [GO:0032418 "lysosome localization"
            evidence=ISO] [GO:0034739 "histone deacetylase activity (H4-K16
            specific)" evidence=IEA] [GO:0034983 "peptidyl-lysine
            deacetylation" evidence=ISO] [GO:0035967 "cellular response to
            topologically incorrect protein" evidence=ISO] [GO:0042826 "histone
            deacetylase binding" evidence=ISO] [GO:0042903 "tubulin deacetylase
            activity" evidence=ISO;IDA] [GO:0043014 "alpha-tubulin binding"
            evidence=ISO] [GO:0043065 "positive regulation of apoptotic
            process" evidence=ISO] [GO:0043130 "ubiquitin binding"
            evidence=IDA] [GO:0043162 "ubiquitin-dependent protein catabolic
            process via the multivesicular body sorting pathway" evidence=IMP]
            [GO:0043234 "protein complex" evidence=IPI] [GO:0043241 "protein
            complex disassembly" evidence=IGI] [GO:0043242 "negative regulation
            of protein complex disassembly" evidence=ISO] [GO:0045861 "negative
            regulation of proteolysis" evidence=ISO] [GO:0046872 "metal ion
            binding" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0048156 "tau protein binding" evidence=ISO]
            [GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
            [GO:0048487 "beta-tubulin binding" evidence=IDA] [GO:0051788
            "response to misfolded protein" evidence=ISO] [GO:0051879 "Hsp90
            protein binding" evidence=ISO] [GO:0070201 "regulation of
            establishment of protein localization" evidence=IMP] [GO:0070301
            "cellular response to hydrogen peroxide" evidence=ISO] [GO:0070840
            "dynein complex binding" evidence=ISO] [GO:0070842 "aggresome
            assembly" evidence=ISO;IGI] [GO:0070845 "polyubiquitinated
            misfolded protein transport" evidence=ISO] [GO:0070846 "Hsp90
            deacetylation" evidence=ISO;IMP] [GO:0070848 "response to growth
            factor stimulus" evidence=ISO] [GO:0070932 "histone H3
            deacetylation" evidence=IEA] [GO:0070933 "histone H4 deacetylation"
            evidence=IEA] [GO:0071218 "cellular response to misfolded protein"
            evidence=IMP] [GO:0090035 "positive regulation of
            chaperone-mediated protein complex assembly" evidence=ISO]
            [GO:0090042 "tubulin deacetylation" evidence=ISO;IDA;IMP]
            InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
            EMBL:AF006603 MGI:MGI:1333752 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005829 GO:GO:0005634 GO:GO:0048471 GO:GO:0031252
            GO:GO:0010469 GO:GO:0006355 GO:GO:0070301 GO:GO:0046872
            GO:GO:0009636 GO:GO:0008270 GO:GO:0045861 GO:GO:0006351
            GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0005901 GO:GO:0016235 GO:GO:0006515 GO:GO:0048487
            GO:GO:0008017 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
            GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
            GO:GO:0043130 GO:GO:0071218 GO:GO:0070932 GO:GO:0070933
            GO:GO:0000118 GO:GO:0090035 eggNOG:COG0123 KO:K11407 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
            GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 EMBL:AL670169
            OrthoDB:EOG40P464 GO:GO:0004407 GeneTree:ENSGT00530000062809
            GO:GO:0042903 HOGENOM:HOG000004769 GO:GO:0034983 CTD:10013
            HOVERGEN:HBG051894 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
            IPI:IPI00323705 PIR:T13964 RefSeq:NP_001123888.1 RefSeq:NP_034543.3
            UniGene:Mm.29854 ProteinModelPortal:Q9Z2V5 SMR:Q9Z2V5 IntAct:Q9Z2V5
            MINT:MINT-220628 STRING:Q9Z2V5 PhosphoSite:Q9Z2V5 PaxDb:Q9Z2V5
            PRIDE:Q9Z2V5 Ensembl:ENSMUST00000033501 Ensembl:ENSMUST00000115642
            GeneID:15185 KEGG:mmu:15185 BindingDB:Q9Z2V5 ChEMBL:CHEMBL2878
            NextBio:287707 Bgee:Q9Z2V5 CleanEx:MM_HDAC6 Genevestigator:Q9Z2V5
            GermOnline:ENSMUSG00000031161 Uniprot:Q9Z2V5
        Length = 1149

 Score = 225 (84.3 bits), Expect = 3.3e-15, P = 3.3e-15
 Identities = 89/374 (23%), Positives = 165/374 (44%)

Query:    23 NHPMKPHRLC-MTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPD--T 79
             +HP  P R+  +  HL     L  +  I     A   EL   HSA+YVE L R T    T
Sbjct:   498 HHPETPQRILRIMCHLE-EVGLAARCLILPARPALDSELLTCHSAEYVEHL-RTTEKMKT 555

Query:    80 QHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARR-LNNQLCD-IAINWAGGLHH 137
             + L R E   ++    CP   + F   ++  G         L+ ++ + IA+    G HH
Sbjct:   556 RDLHR-EGANFDSIYICP---STFACAKLATGAACRLVEAVLSGEVLNGIAVVRPPG-HH 610

Query:   138 AKKCEASGFCYINDLVLGI--LELLKYHA-RVLYIDIDVHHGDGVEEAFYFTDRVMTVSF 194
             A+   A GFC+ N + +     +++   A R+L +D DVHHG+G +  F     V+ VS 
Sbjct:   611 AEPNAACGFCFFNSVAVAARHAQIIAGRALRILIVDWDVHHGNGTQHIFEDDPSVLYVSL 670

Query:   195 HKFG-DLFFP--GTGDVKEIGEREGKFYAINVPLKDG-IDDTSFTRLFKTIISKVVETYA 250
             H++    FFP    G   ++G   G  + +NVP     + D  +   +  ++  +   + 
Sbjct:   671 HRYDRGTFFPMGDEGASSQVGRDAGIGFTVNVPWNGPRMGDADYLAAWHRLVLPIAYEFN 730

Query:   251 PGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF-NLPLLVTGGGGYTKENVARCW 309
             P  +++  G D+  GD LG   ++ +G+A     +       +++   GGY   +++   
Sbjct:   731 PELVLISAGFDAAQGDPLGGCQVTPEGYAHLTHLLMGLAGGRIILILEGGYNLASISESM 790

Query:   310 TVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRS 369
                T  LL  + P   P+   ++   P+    +    +  ++ K Y  ++++  +E+   
Sbjct:   791 AACTHSLLG-DPP---PQLTLLR--PPQSGALVSISEVIQVHRK-YWRSLRLMKMEDKEE 843

Query:   370 IQHAPSVQMQEVPP 383
                +  V ++++PP
Sbjct:   844 CSSSRLV-IKKLPP 856

 Score = 189 (71.6 bits), Expect = 3.2e-11, P = 3.2e-11
 Identities = 81/312 (25%), Positives = 125/312 (40%)

Query:    25 PMKPHRL-CMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
             P  P RL  +   L+L   L + +  ++   A   EL   HS +Y++ +      TQ++ 
Sbjct:   105 PESPERLHAIREQLILEGLLGRCVS-FQARFAEKEELMLVHSLEYIDLMET----TQYMN 159

Query:    84 RQELTKYNLGEDCPVFENLFEFCQIYAGGTI----DA--ARRLNNQLCDIAINWAGGLHH 137
               EL       D          C   A G++    DA     + N +    I   G  HH
Sbjct:   160 EGELRVLAETYDSVYLHPNSYSCACLATGSVLRLVDALMGAEIRNGMA--VIRPPG--HH 215

Query:   138 AKKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFH 195
             A+     G+C  N L +      K H   RVL +D DVHHG G +  F     V+  S H
Sbjct:   216 AQHNLMDGYCMFNHLAVAARYAQKKHRIQRVLIVDWDVHHGQGTQFIFDQDPSVLYFSIH 275

Query:   196 KFGD-LFFPG--TGDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETYAP 251
             ++    F+P     +   IG  +G+ Y INVP    G+ D  +   F  I+  V   + P
Sbjct:   276 RYEHGRFWPHLKASNWSTIGFGQGQGYTINVPWNQTGMRDADYIAAFLHILLPVASEFQP 335

Query:   252 GAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF-NLPLLVTGGGGYTKENVARCWT 310
               +++  G D+L GD  G    +  G A     +       L+++  GGY    +A+  +
Sbjct:   336 QLVLVAAGFDALHGDPKGEMAATPAGFAHLTHLLMGLAGGKLILSLEGGYNLRALAKGVS 395

Query:   311 VETGILLDTELP 322
                  LL    P
Sbjct:   396 ASLHTLLGDPCP 407


>TIGR_CMR|SPO_2002 [details] [associations]
            symbol:SPO_2002 "acetylpolyamine aminohydrolase"
            species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006595 "polyamine
            metabolic process" evidence=ISS] [GO:0016810 "hydrolase activity,
            acting on carbon-nitrogen (but not peptide) bonds" evidence=ISS]
            Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
            GenomeReviews:CP000031_GR GO:GO:0016787 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            HOGENOM:HOG000225182 RefSeq:YP_167236.1 ProteinModelPortal:Q5LRW9
            GeneID:3192741 KEGG:sil:SPO2002 PATRIC:23377335 OMA:EQPERAD
            ProtClustDB:CLSK2747354 Uniprot:Q5LRW9
        Length = 341

 Score = 211 (79.3 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
 Identities = 63/222 (28%), Positives = 97/222 (43%)

Query:    96 CPVFENLFEFCQIYAGGTIDAARRL-NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVL 154
             CP+ E  +E     A   I  A  +   +     ++   G HHA    A GFC++N+  +
Sbjct:   117 CPIAEGTWEAAYWSAQSAITGADLIIQGERSAYVLSRPPG-HHAFGDLAGGFCFLNNSAI 175

Query:   155 GILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT-GDVKEIGE 213
                 L     R   +DIDVHHG+G +  FY  D V+TVS H     F+P   G  +E G 
Sbjct:   176 AAERLRAAGLRPAILDIDVHHGNGTQGIFYERDDVLTVSIHADPARFYPFFWGHAQERGA 235

Query:   214 REGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNL 273
               G  Y +N+PL  G  D  +       + +V  ++    +V+  G D+   D      +
Sbjct:   236 GRGLGYNLNLPLARGTGDDDYLDTLSVALRQVA-SFGSRVLVVALGLDASIDDPFQGLAI 294

Query:   274 SIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWT-VETG 314
             + DG A     +    +P+L    GGY  +++    T V TG
Sbjct:   295 TQDGFARIGAALAGTRVPVLFVQEGGYLCDSLGDTLTRVLTG 336

 Score = 38 (18.4 bits), Expect = 4.1e-15, Sum P(2) = 4.1e-15
 Identities = 7/16 (43%), Positives = 10/16 (62%)

Query:    60 LAQFHSADYVEFLHRI 75
             +A  HS +Y+ FL  I
Sbjct:    58 IAALHSPEYLTFLQTI 73


>UNIPROTKB|F1PK81 [details] [associations]
            symbol:HDAC7 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0090050 "positive regulation of cell
            migration involved in sprouting angiogenesis" evidence=IEA]
            [GO:0071889 "14-3-3 protein binding" evidence=IEA] [GO:0070491
            "repressing transcription factor binding" evidence=IEA] [GO:0045668
            "negative regulation of osteoblast differentiation" evidence=IEA]
            [GO:0033613 "activating transcription factor binding" evidence=IEA]
            [GO:0032703 "negative regulation of interleukin-2 production"
            evidence=IEA] [GO:0007043 "cell-cell junction assembly"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005080
            "protein kinase C binding" evidence=IEA] [GO:0003714 "transcription
            corepressor activity" evidence=IEA] [GO:0003682 "chromatin binding"
            evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0004407 "histone
            deacetylase activity" evidence=IEA] [GO:0000118 "histone
            deacetylase complex" evidence=IEA] InterPro:IPR017320
            PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737
            GO:GO:0003714 GO:GO:0003682 GO:GO:0000122 GO:GO:0001570
            GO:GO:0007043 GO:GO:0045668 GO:GO:0016575 GO:GO:0000118
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 GO:GO:0032703 GO:GO:0090050 GO:GO:0004407
            GeneTree:ENSGT00530000062809 OMA:AFRIVVM EMBL:AAEX03015093
            Ensembl:ENSCAFT00000014571 Uniprot:F1PK81
        Length = 951

 Score = 223 (83.6 bits), Expect = 4.2e-15, P = 4.2e-15
 Identities = 56/192 (29%), Positives = 98/192 (51%)

Query:   116 AARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYH--ARVLYIDIDV 173
             A+R L N     A+    G HHA    A GFC+ N + +   +L +    +++L +D DV
Sbjct:   652 ASRELKN---GFAVVRPPG-HHADHSTAMGFCFFNSVAIACRQLQQQGKASKILIMDWDV 707

Query:   174 HHGDGVEEAFYFTDRVMTVSFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID-- 230
             HHG+G ++ FY    V+ +S H+  D  FFPG+G V E+G   G+ + +NV    G+D  
Sbjct:   708 HHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLDPP 767

Query:   231 --DTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR--LGCFNLSIDGHAECVRFVK 286
               D  +   F+ ++  +   ++P  +++  G D+  G    LG +++S    A+C  ++ 
Sbjct:   768 MGDPEYLAAFRMVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVS----AKCFGYMT 823

Query:   287 KFNLPLLVTGGG 298
             +    L+   GG
Sbjct:   824 Q---QLMSLAGG 832


>UNIPROTKB|F1PN11 [details] [associations]
            symbol:HDAC6 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0090035 "positive regulation of
            chaperone-mediated protein complex assembly" evidence=IEA]
            [GO:0071218 "cellular response to misfolded protein" evidence=IEA]
            [GO:0070848 "response to growth factor stimulus" evidence=IEA]
            [GO:0070846 "Hsp90 deacetylation" evidence=IEA] [GO:0070845
            "polyubiquitinated misfolded protein transport" evidence=IEA]
            [GO:0070842 "aggresome assembly" evidence=IEA] [GO:0070840 "dynein
            complex binding" evidence=IEA] [GO:0070301 "cellular response to
            hydrogen peroxide" evidence=IEA] [GO:0051879 "Hsp90 protein
            binding" evidence=IEA] [GO:0048487 "beta-tubulin binding"
            evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] [GO:0048156 "tau protein binding" evidence=IEA]
            [GO:0045861 "negative regulation of proteolysis" evidence=IEA]
            [GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0043162
            "ubiquitin-dependent protein catabolic process via the
            multivesicular body sorting pathway" evidence=IEA] [GO:0043065
            "positive regulation of apoptotic process" evidence=IEA]
            [GO:0043014 "alpha-tubulin binding" evidence=IEA] [GO:0042903
            "tubulin deacetylase activity" evidence=IEA] [GO:0042826 "histone
            deacetylase binding" evidence=IEA] [GO:0034983 "peptidyl-lysine
            deacetylation" evidence=IEA] [GO:0032418 "lysosome localization"
            evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
            [GO:0031252 "cell leading edge" evidence=IEA] [GO:0030286 "dynein
            complex" evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
            [GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
            regulation of receptor biosynthetic process" evidence=IEA]
            [GO:0010634 "positive regulation of epithelial cell migration"
            evidence=IEA] [GO:0010469 "regulation of receptor activity"
            evidence=IEA] [GO:0009967 "positive regulation of signal
            transduction" evidence=IEA] [GO:0009636 "response to toxic
            substance" evidence=IEA] [GO:0008017 "microtubule binding"
            evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
            [GO:0007026 "negative regulation of microtubule depolymerization"
            evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
            protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
            evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
            deacetylase activity" evidence=IEA] [GO:0000209 "protein
            polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
            complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
            GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
            GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
            GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
            GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
            GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
            GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
            GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
            GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC
            EMBL:AAEX03026338 Ensembl:ENSCAFT00000024781 Uniprot:F1PN11
        Length = 1157

 Score = 224 (83.9 bits), Expect = 4.3e-15, P = 4.3e-15
 Identities = 80/305 (26%), Positives = 135/305 (44%)

Query:    23 NHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPD--TQ 80
             +HP  P R+      +    L  +        A   EL   HSA+YV  L R T    T+
Sbjct:   512 HHPEMPQRVFRIMRRLEELGLAGRCLTLPTRPATDAELLTCHSAEYVGRL-RATEKMKTR 570

Query:    81 HLFRQELTKYNLGEDCPVFENLFEFCQIYAGGT---IDA--ARRLNNQLCDIAINWAGGL 135
              L R E + ++    CP   + F   Q+  G     ++A  AR + N     A+    G 
Sbjct:   571 ELHR-EGSNFDSIYICP---STFACAQLATGSVCRLVEAVLAREVLN---GTAVVRPPG- 622

Query:   136 HHAKKCEASGFCYINDLVLGI--LELLKYHA-RVLYIDIDVHHGDGVEEAFYFTDRVMTV 192
             HHA++  A GFC+ N + +     + +  HA R+L +D DVHHG+G +  F     V+ +
Sbjct:   623 HHAERDAACGFCFFNSVAVAARHAQAISGHALRILIVDWDVHHGNGTQHIFEEDPSVLYI 682

Query:   193 SFHKFGD-LFFP--GTGDVKEIGEREGKFYAINVPLKDG-IDDTSFTRLFKTIISKVVET 248
             S H++    FFP    G   ++G+  G  + +NV      + D  +   +  ++  +   
Sbjct:   683 SLHRYDHGTFFPMGDEGASSQVGQAAGTGFTVNVAWNGPRVGDADYLAAWHRLVLPIAYE 742

Query:   249 YAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF---NLPLLVTGGGGYTK--E 303
             + P  +++  G D+  GD LG   +S +G+A     +       + L++ GG   T   E
Sbjct:   743 FNPELVLVSAGFDAARGDPLGGCQVSPEGYAHLTHLLMGLANGRVVLILEGGYNLTSISE 802

Query:   304 NVARC 308
             ++A C
Sbjct:   803 SMAAC 807

 Score = 192 (72.6 bits), Expect = 1.5e-11, P = 1.5e-11
 Identities = 78/311 (25%), Positives = 130/311 (41%)

Query:    25 PMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFR 84
             P  P RL      ++   L  +   ++   A   EL   HS +Y++ +      TQ++  
Sbjct:   120 PEGPERLHAIKEQLIQDGLLDRCVSFQARFAEKEELMLVHSLEYIDLMET----TQYMNE 175

Query:    85 QELTKY-NLGEDCPVFENLFEFCQIYAGGTI----DAARRLNNQLCD-IAINWAGGLHHA 138
              EL    +  +   +  N +  C   A G++    DA   L N++ + +AI    G HHA
Sbjct:   176 GELRILADTYDSVYLHPNSYT-CACLASGSVLRLVDAV--LRNEIRNGMAIVRPPG-HHA 231

Query:   139 KKCEASGFCYINDLVLGILELLKYH--ARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHK 196
             +     G+C  N + +      + H   RVL +D DVHHG G +  F     V+  S H+
Sbjct:   232 QHSLMDGYCMFNHVAVAARYAQQKHNIERVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHR 291

Query:   197 FGD-LFFPG--TGDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETYAPG 252
             +    F+P     +   IG  +G+ Y INVP    G+ D  +   F  ++  V   + P 
Sbjct:   292 YEQGRFWPHLKASNWSTIGFGQGQGYTINVPWNQVGMRDADYIAAFLRLLLPVALEFQPQ 351

Query:   253 AIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF-NLPLLVTGGGGYTKENVARCWTV 311
              +++  G D+L GD  G    +  G A+    +       L+++  GGY    +A   + 
Sbjct:   352 LVLVAAGFDALQGDPKGEMATTPAGFAQLTHLLMGLAGGKLILSLEGGYNLRALAEGVSA 411

Query:   312 ETGILLDTELP 322
                 LL    P
Sbjct:   412 SLHTLLGDPCP 422


>UNIPROTKB|Q20296 [details] [associations]
            symbol:hda-6 "Histone deacetylase 6" species:6239
            "Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
            evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355
            GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
            KO:K11407 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 EMBL:FO081367 GeneTree:ENSGT00530000062809
            RefSeq:NP_500787.1 RefSeq:NP_500788.1 UniGene:Cel.12964
            ProteinModelPortal:Q20296 SMR:Q20296 STRING:Q20296 PaxDb:Q20296
            PRIDE:Q20296 EnsemblMetazoa:F41H10.6b GeneID:177316
            KEGG:cel:CELE_F41H10.6 UCSC:Y51H1A.5.1 CTD:177316
            WormBase:F41H10.6a WormBase:F41H10.6b HOGENOM:HOG000004769
            NextBio:896234 ArrayExpress:Q20296 GO:GO:0033558 Uniprot:Q20296
        Length = 955

 Score = 228 (85.3 bits), Expect = 5.0e-15, Sum P(2) = 5.0e-15
 Identities = 89/362 (24%), Positives = 153/362 (42%)

Query:    85 QELTKYNLGEDCPVFENLF--EFCQIYAGGTIDAARRLNNQL-CDIAINWAGGL----HH 137
             ++ T+ ++   C  ++++F  E     A   +   R L N++  + A N    +    HH
Sbjct:    87 EKKTQEDINSQCEKYDSVFMTENSMKVAKDGVACVRDLTNRIMANEASNGFAVVRPPGHH 146

Query:   138 AKKCEASGFCYINDLVLGILELLKYHA-RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHK 196
             A      GFC  N++     E     A R+L +D+DVHHG G +  FY   RV+  S H+
Sbjct:   147 ADSVSPCGFCLFNNVAQAAEEAFFSGAERILIVDLDVHHGHGTQRIFYDDKRVLYFSIHR 206

Query:   197 FGD-LFFPGT--GDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETYAPG 252
                 LF+P     D   IG  +G  Y  N+ L + G  D+ +  +   ++  +   + P 
Sbjct:   207 HEHGLFWPHLPESDFDHIGSGKGLGYNANLALNETGCTDSDYLSIIFHVLLPLATQFDPH 266

Query:   253 AIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLP-LLVTGGGGYTKE----NVAR 307
              +++  G D+L GD LG   L+ DG++  +  +K      +LV   GGY  +     V R
Sbjct:   267 FVIISAGFDALLGDPLGGMCLTPDGYSHILYHLKSLAQGRMLVVLEGGYNHQISAVAVQR 326

Query:   308 CWTVETGIL-LDTELPNEIPENEYIKYFAPECS-LRIPNGHIENLNSKSYLSTIKMQVLE 365
             C  V  G      EL NE P+   +       S LR      +   S++ L   +  ++ 
Sbjct:   327 CVRVLLGYAPFSIEL-NEAPKESTVDSCVSLVSVLRHHWNCFDYFPSRTSLRLAQWPIVN 385

Query:   366 NLRSIQHAPSVQMQE----VPPDFYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDN 421
                   + P+ +  +    +  +    EF   +  P E M+  T     + DD  ++ + 
Sbjct:   386 TKVIYNYDPTTRRADTGEIIQDELASTEFTASDVIPTENME--TLIYFNEGDDAHFDLEE 443

Query:   422 DN 423
             DN
Sbjct:   444 DN 445

 Score = 207 (77.9 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
 Identities = 63/260 (24%), Positives = 120/260 (46%)

Query:   136 HHAKKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVS 193
             HHA   ++SGFC  N++ +      + H   RVL +D DVHHG+G +E FY    VM +S
Sbjct:   560 HHASASKSSGFCIFNNVAVAAKYAQRRHKAKRVLILDWDVHHGNGTQEIFYEDSNVMYMS 619

Query:   194 FHKF--GDLFFP-GTG-DVKEIGEREGKFYAINVPLKDGID--DTSFTRLFKTIISKVVE 247
              H+   G+ F+P G   D  ++GE  G+  ++NVP   G+   D  +   F+ +I  +  
Sbjct:   620 IHRHDKGN-FYPIGEPKDYSDVGEGAGEGMSVNVPFS-GVQMGDNEYQMAFQRVIMPIAY 677

Query:   248 TYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTG-GGGYTKENVA 306
              + P  +++  G D+   D LG + ++ +  A     +       ++T   GGY   +++
Sbjct:   678 QFNPDLVLISAGFDAAVDDPLGEYKVTPETFALMTYQLSSLAGGRIITVLEGGYNLTSIS 737

Query:   307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLEN 366
                     +L +  +   + E +  + FA +   +I +  I+ +     +  ++ +    
Sbjct:   738 NSAQAVCEVLQNRSMLRRLREEK--EQFATKPQ-KIESSCIKTIRE---VCAVQQKYWSI 791

Query:   367 LRSIQHAPSVQMQEVPPDFY 386
             L+  Q  PS    ++  + Y
Sbjct:   792 LKGFQVTPSNYGLDIDDEAY 811

 Score = 39 (18.8 bits), Expect = 5.0e-15, Sum P(2) = 5.0e-15
 Identities = 8/21 (38%), Positives = 11/21 (52%)

Query:    84 RQELTKYNLGEDCPVFENLFE 104
             ++ LTK  + E C V  N  E
Sbjct:    45 KEALTKTKILEKCTVLTNFLE 65


>UNIPROTKB|Q9KQF6 [details] [associations]
            symbol:VC_2042 "Histone deacetylase/AcuC/AphA family
            protein" species:243277 "Vibrio cholerae O1 biovar El Tor str.
            N16961" [GO:0008150 "biological_process" evidence=ND] Pfam:PF00850
            INTERPRO:IPR000286 EMBL:AE003852 GenomeReviews:AE003852_GR
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 OMA:HRFPMRK PIR:D82126 RefSeq:NP_231676.1
            ProteinModelPortal:Q9KQF6 DNASU:2613423 GeneID:2613423
            KEGG:vch:VC2042 PATRIC:20083116 ProtClustDB:CLSK874650
            Uniprot:Q9KQF6
        Length = 306

 Score = 205 (77.2 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 80/296 (27%), Positives = 122/296 (41%)

Query:    21 GPNHPMKPHRLC---MTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITP 77
             G  +P+  +RL    +      S       E + P  A    + + H  DYV+ L   T 
Sbjct:    18 GHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRITRLHDPDYVQALLEGTL 77

Query:    78 DTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGT-IDAARRLNNQLCDIAINWAGGLH 136
                 + R       +G   P  + L E      GGT +   + L +    +AI+ +GG H
Sbjct:    78 SAAKMRR-------IG--FPWSKPLIERTLYSVGGTCLTVEQALQS---GVAIHLSGGYH 125

Query:   137 HAKKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVSF 194
             HA     SGFC  NDL +     L   +  +VL ID DVHHGDG        D ++T+SF
Sbjct:   126 HAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHGDGTATLCAERDEIITLSF 185

Query:   195 HKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAI 254
             H   D  FP                +++V   +   D  F   F  ++   V  + P  I
Sbjct:   186 HC--DKNFPARKPAS----------SMDVGYANQTGDEEFLSTFIQVVEMAVNLHRPDLI 233

Query:   255 VLQCGADSLAGDRLGCFNLSIDGHAECVRFV----KKFNLPLLVTGGGGYTKENVA 306
             +   G D    D LG  ++S    A+  RF+    K+ ++P+    GGGY +++ A
Sbjct:   234 LYDAGVDIHNDDELGYLSISQAAIAQRDRFMLGLAKQESIPIACVIGGGYREDHTA 289


>TIGR_CMR|VC_2042 [details] [associations]
            symbol:VC_2042 "histone deacetylase/AcuC/AphA family
            protein" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008150
            "biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
            EMBL:AE003852 GenomeReviews:AE003852_GR Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:HRFPMRK
            PIR:D82126 RefSeq:NP_231676.1 ProteinModelPortal:Q9KQF6
            DNASU:2613423 GeneID:2613423 KEGG:vch:VC2042 PATRIC:20083116
            ProtClustDB:CLSK874650 Uniprot:Q9KQF6
        Length = 306

 Score = 205 (77.2 bits), Expect = 1.8e-14, P = 1.8e-14
 Identities = 80/296 (27%), Positives = 122/296 (41%)

Query:    21 GPNHPMKPHRLC---MTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITP 77
             G  +P+  +RL    +      S       E + P  A    + + H  DYV+ L   T 
Sbjct:    18 GHRYPINKYRLLYEEIVRQREQSEAWQASFEFHTPIAAELSRITRLHDPDYVQALLEGTL 77

Query:    78 DTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGT-IDAARRLNNQLCDIAINWAGGLH 136
                 + R       +G   P  + L E      GGT +   + L +    +AI+ +GG H
Sbjct:    78 SAAKMRR-------IG--FPWSKPLIERTLYSVGGTCLTVEQALQS---GVAIHLSGGYH 125

Query:   137 HAKKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVSF 194
             HA     SGFC  NDL +     L   +  +VL ID DVHHGDG        D ++T+SF
Sbjct:   126 HAHADFGSGFCLFNDLAIAAHFALSLPSVDKVLIIDSDVHHGDGTATLCAERDEIITLSF 185

Query:   195 HKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAI 254
             H   D  FP                +++V   +   D  F   F  ++   V  + P  I
Sbjct:   186 HC--DKNFPARKPAS----------SMDVGYANQTGDEEFLSTFIQVVEMAVNLHRPDLI 233

Query:   255 VLQCGADSLAGDRLGCFNLSIDGHAECVRFV----KKFNLPLLVTGGGGYTKENVA 306
             +   G D    D LG  ++S    A+  RF+    K+ ++P+    GGGY +++ A
Sbjct:   234 LYDAGVDIHNDDELGYLSISQAAIAQRDRFMLGLAKQESIPIACVIGGGYREDHTA 289


>UNIPROTKB|E2RSA8 [details] [associations]
            symbol:HDAC10 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:GLEQRCL
            GeneTree:ENSGT00530000062809 EMBL:AAEX03007133
            Ensembl:ENSCAFT00000001069 Uniprot:E2RSA8
        Length = 668

 Score = 215 (80.7 bits), Expect = 1.9e-14, P = 1.9e-14
 Identities = 78/314 (24%), Positives = 135/314 (42%)

Query:    27 KPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQE 86
             +P RL      +    L ++     P +A   EL   HS +YV  L      TQ L  QE
Sbjct:    27 RPERLTAALRRLQQGGLEQRCLQLAPREASEAELGLVHSPEYVSLLR----GTQALDTQE 82

Query:    87 LTKYNLGEDCPVFE-NLFEFCQIYAGGT---IDAARR--LNNQLCDIAINWAGGLHHAKK 140
             L   +   D   F  + F   ++  G     +DA     ++N L    +   G  HH+++
Sbjct:    83 LRALSGQYDAVYFHPSTFHCARLAVGAALQLVDAVLMGAVHNGLA--LVRPPG--HHSQR 138

Query:   141 CEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFG 198
               A+GFC  N++ +      + H   R+L +D DVHHG G++  F     V+  S+H++ 
Sbjct:   139 AAANGFCVFNNVAIAARHAQQKHGLQRILIVDWDVHHGQGIQYIFEDDPSVLYFSWHRYE 198

Query:   199 D-LFFP--GTGDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETYAPGAI 254
                F+P     D   +G+ +G+ + +N+P    G+ +  +   F  ++  V   + P  +
Sbjct:   199 HGRFWPYLRESDADAVGQGKGRGFTVNLPWNQVGMGNADYLAAFLHVLLPVAFEFDPELV 258

Query:   255 VLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG------GGYTKENVARC 308
             ++  G DS  GD  G     +    EC   + +  L +L  G       GGY  E++++ 
Sbjct:   259 LVSAGFDSAIGDPEG----QMQATPECFGHLTQL-LQVLAGGRVCAVLEGGYHLESLSQS 313

Query:   309 WTVETGILLDTELP 322
               +    LL   +P
Sbjct:   314 VCMVVRALLGDPVP 327


>UNIPROTKB|Q969S8 [details] [associations]
            symbol:HDAC10 "Histone deacetylase 10" species:9606 "Homo
            sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
            specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
            activity (H3-K18 specific)" evidence=IEA] [GO:0014003
            "oligodendrocyte development" evidence=IEA] [GO:0042826 "histone
            deacetylase binding" evidence=IDA] [GO:0019899 "enzyme binding"
            evidence=IPI] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IDA] [GO:0016575 "histone deacetylation"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0004407
            "histone deacetylase activity" evidence=IDA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0016568 "chromatin modification" evidence=NAS] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0000118 "histone deacetylase complex"
            evidence=IDA] [GO:0033558 "protein deacetylase activity"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006476 "protein
            deacetylation" evidence=IDA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0007219 "Notch signaling pathway" evidence=TAS] Pfam:PF00850
            EMBL:AF407272 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737
            Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
            GO:GO:0007219 GO:GO:0006351 GO:GO:0000122
            Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0042826
            GO:GO:0014003 GO:GO:0070932 GO:GO:0070933 GO:GO:0000118
            eggNOG:COG0123 KO:K11407 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AL022328 EMBL:AF426160
            EMBL:AF393962 EMBL:AF407273 EMBL:CR456465 EMBL:AY450395
            EMBL:BC125083 EMBL:AL512711 IPI:IPI00012439 IPI:IPI00216339
            IPI:IPI00216341 IPI:IPI00879495 RefSeq:NP_001152758.1
            RefSeq:NP_114408.3 UniGene:Hs.26593 ProteinModelPortal:Q969S8
            SMR:Q969S8 IntAct:Q969S8 STRING:Q969S8 PhosphoSite:Q969S8
            DMDM:27734403 PaxDb:Q969S8 PRIDE:Q969S8 DNASU:83933
            Ensembl:ENST00000216271 Ensembl:ENST00000349505
            Ensembl:ENST00000454936 GeneID:83933 KEGG:hsa:83933 UCSC:uc003bkg.3
            UCSC:uc010hav.3 CTD:83933 GeneCards:GC22M050683 H-InvDB:HIX0080289
            HGNC:HGNC:18128 HPA:CAB045977 MIM:608544 neXtProt:NX_Q969S8
            PharmGKB:PA38297 HOVERGEN:HBG051892 InParanoid:Q969S8 OMA:GLEQRCL
            OrthoDB:EOG40P464 PhylomeDB:Q969S8 BRENDA:3.5.1.98 SABIO-RK:Q969S8
            BindingDB:Q969S8 ChEMBL:CHEMBL5103 ChiTaRS:HDAC10 GenomeRNAi:83933
            NextBio:73053 ArrayExpress:Q969S8 Bgee:Q969S8 CleanEx:HS_HDAC10
            Genevestigator:Q969S8 GermOnline:ENSG00000100429 GO:GO:0004407
            Uniprot:Q969S8
        Length = 669

 Score = 213 (80.0 bits), Expect = 3.2e-14, P = 3.2e-14
 Identities = 81/316 (25%), Positives = 138/316 (43%)

Query:    27 KPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQE 86
             +P RL      +    L ++       +A   EL   HS +YV  +     +TQ L ++E
Sbjct:    27 RPERLTAALDRLRQRGLEQRCLRLSAREASEEELGLVHSPEYVSLVR----ETQVLGKEE 82

Query:    87 LTKYNLGEDCPVFE-NLFEFCQIYAGG---TIDAARRLNNQLCD-IAINWAGGLHHAKKC 141
             L   +   D   F  + F   ++ AG     +DA   L   + + +A+    G HH ++ 
Sbjct:    83 LQALSGQFDAIYFHPSTFHCARLAAGAGLQLVDAV--LTGAVQNGLALVRPPG-HHGQRA 139

Query:   142 EASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGD 199
              A+GFC  N++ +      + H   R+L +D DVHHG G++  F     V+  S+H++  
Sbjct:   140 AANGFCVFNNVAIAAAHAKQKHGLHRILVVDWDVHHGQGIQYLFEDDPSVLYFSWHRYEH 199

Query:   200 -LFFP--GTGDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETYAPGAIV 255
               F+P     D   +G  +G  + +N+P    G+ +  +   F  ++  +   + P  ++
Sbjct:   200 GRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADYVAAFLHLLLPLAFEFDPELVL 259

Query:   256 LQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG-------GGYTKENVAR- 307
             +  G DS  GD  G     +    EC  F     L  ++ GG       GGY  E++A  
Sbjct:   260 VSAGFDSAIGDPEG----QMQATPEC--FAHLTQLLQVLAGGRVCAVLEGGYHLESLAES 313

Query:   308 -CWTVETGILLDTELP 322
              C TV+T +L D   P
Sbjct:   314 VCMTVQT-LLGDPAPP 328


>UNIPROTKB|F1SEI2 [details] [associations]
            symbol:HDAC9 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0090050 "positive regulation of cell migration involved
            in sprouting angiogenesis" evidence=IEA] [GO:0070933 "histone H4
            deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
            evidence=IEA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0042826 "histone deacetylase
            binding" evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
            evidence=IEA] [GO:0032869 "cellular response to insulin stimulus"
            evidence=IEA] [GO:0008134 "transcription factor binding"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IEA] [GO:0005080 "protein
            kinase C binding" evidence=IEA] [GO:0004407 "histone deacetylase
            activity" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005737 GO:GO:0045892 GO:GO:0032869 GO:GO:0005667
            GO:GO:0070932 GO:GO:0070933 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050 GO:GO:0004407
            GeneTree:ENSGT00530000062809 GO:GO:0034983 EMBL:CU928566
            Ensembl:ENSSSCT00000016744 OMA:LDRIHIV Uniprot:F1SEI2
        Length = 122

 Score = 189 (71.6 bits), Expect = 3.6e-14, P = 3.6e-14
 Identities = 35/98 (35%), Positives = 59/98 (60%)

Query:   136 HHAKKCEASGFCYINDLVLGILELLKYH--ARVLYIDIDVHHGDGVEEAFYFTDRVMTVS 193
             HHA++  A GFC+ N + +    L      +++L +D+DVHHG+G ++AFY    ++ +S
Sbjct:    13 HHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPSILYIS 72

Query:   194 FHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID 230
              H++ +  FFPG+G   E+G   G+ Y IN+    G+D
Sbjct:    73 LHRYDEGNFFPGSGAPNEVGTGLGEGYNINIAWTGGLD 110


>TIGR_CMR|SPO_3195 [details] [associations]
            symbol:SPO_3195 "histone deacetylase family protein"
            species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004407 "histone
            deacetylase activity" evidence=ISS] [GO:0008152 "metabolic process"
            evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
            GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183
            ProtClustDB:CLSK868223 RefSeq:YP_168398.1 ProteinModelPortal:Q5LNK8
            GeneID:3195671 KEGG:sil:SPO3195 PATRIC:23379837 OMA:NGFCLLA
            Uniprot:Q5LNK8
        Length = 364

 Score = 206 (77.6 bits), Expect = 4.1e-14, P = 4.1e-14
 Identities = 74/294 (25%), Positives = 124/294 (42%)

Query:    22 PNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQH 81
             P  P    RL    +L+    LH  +E+     A   ++ + H   Y++   R++     
Sbjct:    39 PEAPETKRRL---KNLIEVTGLHSDLEMVTGGSATIEDVLRVHPRSYIDEFRRLSDSGGG 95

Query:    82 LFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL--NNQLCDIAINWAGGLHHAK 139
                       LG   P     FE   + AG  IDA   +         A++   G HH  
Sbjct:    96 ---------ELGLRTPFGPGAFEIAMLSAGLVIDAVEGVVQGRYRNAYALSRPPG-HHCL 145

Query:   140 KCEASGFCYINDLVLGILELLKYHA---RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHK 196
                 +GFC + ++ + I E  K      +V  +D DVHHG+G E  +Y  D V+T+S H+
Sbjct:   146 PDWPNGFCLLANIAIAI-EAAKAKGLLGKVAVLDWDVHHGNGTEAIYYERDDVLTISIHQ 204

Query:   197 FGDLFFP-GTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIV 255
               D  +P  TG + + G+  G  + +N+PL  G    ++    + +I   ++ +    ++
Sbjct:   205 --DRCYPHDTGSIDDQGKGAGLGFNMNIPLPPGCGHNAYVEATERLIIPKLKAFDADLVI 262

Query:   256 LQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG-GGYTKENVARC 308
             + CG D+   D L     S +   E  R V + +   LV    GGY++  V  C
Sbjct:   263 IACGFDAGGFDPLARMMCSAETFREMTRRVMQVSDGKLVAAHEGGYSELYVPFC 316


>UNIPROTKB|E5RJ04 [details] [associations]
            symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
            chromatin" evidence=IEA] [GO:0000792 "heterochromatin"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005657
            "replication fork" evidence=IEA] [GO:0005667 "transcription factor
            complex" evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0009913 "epidermal cell
            differentiation" evidence=IEA] [GO:0010977 "negative regulation of
            neuron projection development" evidence=IEA] [GO:0016358 "dendrite
            development" evidence=IEA] [GO:0017053 "transcriptional repressor
            complex" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
            [GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
            "chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
            dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
            morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
            apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
            of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
            "positive regulation of sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
            formation" evidence=IEA] [GO:0061029 "eyelid development in
            camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
            formation" evidence=IEA] [GO:0090090 "negative regulation of
            canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
            "regulation of protein deacetylation" evidence=IEA]
            InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
            GO:GO:0016358 GO:GO:0003700 GO:GO:0005667 GO:GO:0000122
            GO:GO:0000790 GO:GO:0048714 GO:GO:0042475 GO:GO:0090090
            GO:GO:0042733 GO:GO:0061029 GO:GO:0031490 GO:GO:0009913
            GO:GO:0000792 GO:GO:0005657 GO:GO:0060789 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0010977 GO:GO:0061198
            GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
            IPI:IPI00964796 ProteinModelPortal:E5RJ04 SMR:E5RJ04
            Ensembl:ENST00000523240 ArrayExpress:E5RJ04 Bgee:E5RJ04
            Uniprot:E5RJ04
        Length = 65

 Score = 188 (71.2 bits), Expect = 4.6e-14, P = 4.6e-14
 Identities = 31/65 (47%), Positives = 49/65 (75%)

Query:    26 MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQ 85
             MKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS +Y++FL  I PD    + +
Sbjct:     1 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPDNMSEYSK 60

Query:    86 ELTKY 90
             ++ ++
Sbjct:    61 QMQRF 65


>UNIPROTKB|Q47YS1 [details] [associations]
            symbol:CPS_3373 "Histone deacetylase family protein"
            species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000083
            GenomeReviews:CP000083_GR eggNOG:COG0123 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            RefSeq:YP_270049.1 ProteinModelPortal:Q47YS1 STRING:Q47YS1
            GeneID:3521290 KEGG:cps:CPS_3373 PATRIC:21469701
            HOGENOM:HOG000280019 OMA:HRFPMRK ProtClustDB:CLSK757332
            BioCyc:CPSY167879:GI48-3402-MONOMER Uniprot:Q47YS1
        Length = 300

 Score = 200 (75.5 bits), Expect = 6.2e-14, P = 6.2e-14
 Identities = 63/213 (29%), Positives = 92/213 (43%)

Query:    97 PVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGI 156
             P  + L E      GGTI  A+         ++N  GG HHA     SGFC INDL L  
Sbjct:    83 PWSQQLIERTLTAVGGTIMTAQLALEY--GKSLNLTGGYHHAFANFGSGFCMINDLYLAA 140

Query:   157 LELLKYH--ARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGER 214
             L +L+    ++VL  D DVH GDG  +       V TVS H  G+  FP     K++   
Sbjct:   141 LTMLQNDNISKVLIFDADVHQGDGTAKLASNNQNVFTVSIH--GEKNFPHR---KQVSN- 194

Query:   215 EGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLS 274
                   ++  L  G  D+ +       ++K   ++ P A++   G D    D LG  ++S
Sbjct:   195 ------LDFALPKGTTDSLYLETVDNALNKAFSSFKPDAVIYDAGVDIHCNDDLGHLDIS 248

Query:   275 IDGHAECVRFV----KKFNLPLLVTGGGGYTKE 303
               G     + V    K   +P+    GGGY ++
Sbjct:   249 TQGVLARDKLVFDYCKLKGIPIAAVIGGGYQRD 281


>TIGR_CMR|CPS_3373 [details] [associations]
            symbol:CPS_3373 "histone deacetylase family protein"
            species:167879 "Colwellia psychrerythraea 34H" [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000083
            GenomeReviews:CP000083_GR eggNOG:COG0123 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            RefSeq:YP_270049.1 ProteinModelPortal:Q47YS1 STRING:Q47YS1
            GeneID:3521290 KEGG:cps:CPS_3373 PATRIC:21469701
            HOGENOM:HOG000280019 OMA:HRFPMRK ProtClustDB:CLSK757332
            BioCyc:CPSY167879:GI48-3402-MONOMER Uniprot:Q47YS1
        Length = 300

 Score = 200 (75.5 bits), Expect = 6.2e-14, P = 6.2e-14
 Identities = 63/213 (29%), Positives = 92/213 (43%)

Query:    97 PVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGI 156
             P  + L E      GGTI  A+         ++N  GG HHA     SGFC INDL L  
Sbjct:    83 PWSQQLIERTLTAVGGTIMTAQLALEY--GKSLNLTGGYHHAFANFGSGFCMINDLYLAA 140

Query:   157 LELLKYH--ARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGER 214
             L +L+    ++VL  D DVH GDG  +       V TVS H  G+  FP     K++   
Sbjct:   141 LTMLQNDNISKVLIFDADVHQGDGTAKLASNNQNVFTVSIH--GEKNFPHR---KQVSN- 194

Query:   215 EGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLS 274
                   ++  L  G  D+ +       ++K   ++ P A++   G D    D LG  ++S
Sbjct:   195 ------LDFALPKGTTDSLYLETVDNALNKAFSSFKPDAVIYDAGVDIHCNDDLGHLDIS 248

Query:   275 IDGHAECVRFV----KKFNLPLLVTGGGGYTKE 303
               G     + V    K   +P+    GGGY ++
Sbjct:   249 TQGVLARDKLVFDYCKLKGIPIAAVIGGGYQRD 281


>TAIR|locus:2180657 [details] [associations]
            symbol:HDA2 "AT5G26040" species:3702 "Arabidopsis
            thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISM] [GO:0008150
            "biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0006355
            GO:GO:0006351 EMBL:AF149413 GO:GO:0070932 GO:GO:0070933
            eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HSSP:Q9BY41 HOGENOM:HOG000280018
            KO:K11418 OMA:DRGWAIN EMBL:AF428336 EMBL:BT002252 EMBL:AF510671
            EMBL:AF510165 IPI:IPI00535394 IPI:IPI00539406 IPI:IPI00837463
            RefSeq:NP_568480.2 RefSeq:NP_851078.1 UniGene:At.58
            UniGene:At.70191 ProteinModelPortal:Q944K3 SMR:Q944K3 PaxDb:Q944K3
            PRIDE:Q944K3 ProMEX:Q944K3 EnsemblPlants:AT5G26040.2 GeneID:832673
            KEGG:ath:AT5G26040 TAIR:At5g26040 InParanoid:Q944K3
            PhylomeDB:Q944K3 ProtClustDB:CLSN2680263 Genevestigator:Q944K3
            Uniprot:Q944K3
        Length = 387

 Score = 204 (76.9 bits), Expect = 8.9e-14, P = 8.9e-14
 Identities = 79/308 (25%), Positives = 127/308 (41%)

Query:     6 KISYFYDGDVGSVYFGPN--HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
             K+S  Y       + G    HP    +       ++S    ++  I  P +A  ++L   
Sbjct:    73 KVSIIYSSSYDISFMGIEKLHPFDSSKWGRVCKFLVSDGFLEEKAIVEPLEASKIDLLVV 132

Query:    64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFEN-LFEFCQIYAGGTIDAARRLNN 122
             HS +Y+  L + +     +   E+       +  V +  L+ F +   GGTI AA+    
Sbjct:   133 HSENYLNSL-KSSATVARI--TEVAPVAFFPNFLVQQKVLYPFRK-QVGGTILAAKLATE 188

Query:   123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGI-LELLKYH-ARVLYIDIDVHHGDGVE 180
             +    AIN  GG HH       GFC   D+ L I    L+   +RV+ ID+D H G+G E
Sbjct:   189 R--GWAINIGGGFHHCTAERGGGFCAFADISLCIHFAFLRLRISRVMIIDLDAHQGNGHE 246

Query:   181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
                   +RV  +      D++ P   ++     R  +F    V +  G     + R    
Sbjct:   247 TDLGDDNRVYIL------DMYNP---EIYPFDYRARRFIDQKVEVMSGTTTDEYLRKLDE 297

Query:   241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDG---HAECV-RFVKKFNLPLLVTG 296
              +      + P  ++   G D L GD LG   +S DG     E V RF ++ N+PL++  
Sbjct:   298 ALEVASRNFQPELVIYNAGTDILDGDPLGLLKISPDGITSRDEKVFRFAREKNIPLVMLT 357

Query:   297 GGGYTKEN 304
              GGY K +
Sbjct:   358 SGGYMKSS 365


>UNIPROTKB|Q4K5L2 [details] [associations]
            symbol:PFL_5403 "Histone deacetylase family protein"
            species:220664 "Pseudomonas protegens Pf-5" [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000076
            eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000280019
            ProtClustDB:CLSK909647 RefSeq:YP_262471.2 GeneID:3479795
            KEGG:pfl:PFL_5403 PATRIC:19880291
            BioCyc:PFLU220664:GIX8-5440-MONOMER Uniprot:Q4K5L2
        Length = 306

 Score = 199 (75.1 bits), Expect = 1.0e-13, P = 1.0e-13
 Identities = 89/305 (29%), Positives = 130/305 (42%)

Query:    11 YDGDVGSVYFGPNH--PMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVE-LAQFHSAD 67
             Y  D  S  F   H  PM   RL +  HLV S  L +  ++ RP    P E LA  H   
Sbjct:     7 YHDDY-SPEFPAEHRFPMDKFRL-LRDHLVDS-GLTRDADLLRPELC-PAEILALAHDPA 62

Query:    68 YVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDI 127
             Y+E   R    +  L R++  +  L    P  E L        GG++ AA +       +
Sbjct:    63 YIE---RYM--SGELSREDQRRLGL----PWSEALARRTVRAVGGSLLAAEQALEH--GL 111

Query:   128 AINWAGGLHHAKKCEASGFCYINDLVLGILELLKYH--ARVLYIDIDVHHGDGVEEAFYF 185
             A + AGG HHA     +GFC  NDL +    LL+     RVL  D DVH GDG       
Sbjct:   112 ACHLAGGTHHAHYDYPAGFCIFNDLAVISHYLLESGRVGRVLIFDCDVHQGDGTARILQH 171

Query:   186 TDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKV 245
             T   +TVS H   +  FP         + +  +   ++PL  G+ D  +  +    ++ +
Sbjct:   172 TADAVTVSLHC--EKNFPAR-------KAQSDW---DIPLPMGMGDADYLNVVDDTLNYL 219

Query:   246 VETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAE----CVRFVKKFNLPLLVTGGGGYT 301
             +  Y P  ++   G D    D LG   L+  G AE     +R     ++P++   GGGY+
Sbjct:   220 LPLYQPDLVLYDAGVDVHQDDALGYLKLTDAGVAERDERVMRHCLGRDIPVVGVIGGGYS 279

Query:   302 KENVA 306
             K+  A
Sbjct:   280 KDRQA 284


>TAIR|locus:2119201 [details] [associations]
            symbol:HDA14 "AT4G33470" species:3702 "Arabidopsis
            thaliana" [GO:0004407 "histone deacetylase activity" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016575 "histone
            deacetylation" evidence=ISS] [GO:0009507 "chloroplast"
            evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0042903
            "tubulin deacetylase activity" evidence=IDA] [GO:0043014
            "alpha-tubulin binding" evidence=IDA] [GO:0043621 "protein
            self-association" evidence=IPI] [GO:0048487 "beta-tubulin binding"
            evidence=IDA] [GO:0051721 "protein phosphatase 2A binding"
            evidence=IDA] [GO:0090042 "tubulin deacetylation" evidence=IDA]
            [GO:0000023 "maltose metabolic process" evidence=RCA] [GO:0006098
            "pentose-phosphate shunt" evidence=RCA] [GO:0010027 "thylakoid
            membrane organization" evidence=RCA] [GO:0016556 "mRNA
            modification" evidence=RCA] [GO:0019252 "starch biosynthetic
            process" evidence=RCA] [GO:0019288 "isopentenyl diphosphate
            biosynthetic process, mevalonate-independent pathway" evidence=RCA]
            [GO:0019760 "glucosinolate metabolic process" evidence=RCA]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0005634
            GO:GO:0009507 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006355
            GO:GO:0006351 EMBL:AL035678 EMBL:AL161583 GO:GO:0048487
            GO:GO:0051721 GO:GO:0043014 GO:GO:0070932 GO:GO:0070933
            eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 EMBL:AY052234
            EMBL:AY113069 IPI:IPI00532999 PIR:T05998 RefSeq:NP_567921.1
            UniGene:At.26427 HSSP:Q70I53 ProteinModelPortal:Q941D6 SMR:Q941D6
            STRING:Q941D6 PaxDb:Q941D6 PRIDE:Q941D6 EnsemblPlants:AT4G33470.1
            GeneID:829484 KEGG:ath:AT4G33470 TAIR:At4g33470 InParanoid:Q941D6
            OMA:VDAFRPQ PhylomeDB:Q941D6 ProtClustDB:CLSN2689736
            Genevestigator:Q941D6 GO:GO:0042903 Uniprot:Q941D6
        Length = 423

 Score = 204 (76.9 bits), Expect = 1.2e-13, P = 1.2e-13
 Identities = 59/216 (27%), Positives = 97/216 (44%)

Query:   136 HHAKKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVS 193
             HHA      GFC   ++ +      + H   R+  ID DVHHG+G  +AF     +  +S
Sbjct:   201 HHAVPKGPMGFCVFGNVAIAARHAQRTHGLKRIFIIDFDVHHGNGTNDAFTEDPDIFFLS 260

Query:   194 FHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGA 253
              H+ G   +PGTG + +IG+ +G+   +N+PL  G  D +   +F+ II    + + P  
Sbjct:   261 THQDGS--YPGTGKISDIGKGKGEGTTLNLPLPGGSGDIAMRTVFEEIIVPCAQRFKPDI 318

Query:   254 IVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG-------GGYTKENVA 306
             I++  G D+   D L     +   +    + +K+  L   V GG       GGY  E+++
Sbjct:   319 ILVSAGYDAHVLDPLANLQFTTATYYSLAKDIKR--LAKEVCGGRCVFFLEGGYNLESLS 376

Query:   307 RCWTVETGILL-DTELPNEIPENEYIKYFAPECSLR 341
                      LL +  L +E     Y+ Y  P   +R
Sbjct:   377 SSVADSFRALLGEDSLASEFDNPAYL-YDEPMRKVR 411


>WB|WBGene00001838 [details] [associations]
            symbol:hda-10 species:6239 "Caenorhabditis elegans"
            [GO:0016575 "histone deacetylation" evidence=ISS] [GO:0004407
            "histone deacetylase activity" evidence=ISS] Pfam:PF00850
            INTERPRO:IPR000286 eggNOG:COG0123 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            GeneTree:ENSGT00530000062809 UCSC:Y51H1A.5.1 EMBL:AL032644
            PIR:F88359 PIR:T27101 RefSeq:NP_496910.1 ProteinModelPortal:Q9U266
            SMR:Q9U266 STRING:Q9U266 PaxDb:Q9U266 EnsemblMetazoa:Y51H1A.5.1
            EnsemblMetazoa:Y51H1A.5.2 GeneID:175039 KEGG:cel:CELE_Y51H1A.5
            CTD:175039 WormBase:Y51H1A.5 HOGENOM:HOG000021891 InParanoid:Q9U266
            OMA:GFATMIR NextBio:886514 Uniprot:Q9U266
        Length = 517

 Score = 205 (77.2 bits), Expect = 1.5e-13, P = 1.5e-13
 Identities = 72/273 (26%), Positives = 122/273 (44%)

Query:    59 ELAQFHSADYVEFLHRITPDTQHLFRQE--LTKYNLGEDCPVFENLFEFCQIYAGGTIDA 116
             E+   H+  YV+ +   + +T  + +QE   TKY   ED  V    +   ++ AG +ID 
Sbjct:    63 EILAVHTKRYVDDVK--STETMTVEQQESFCTKY---EDIYVNSATWHRAKLAAGASIDL 117

Query:   117 ARR-LNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHH 175
                 +  +   IA     G HHA   E  GFC  N++ +     ++   +VL +D DVH 
Sbjct:   118 MTSVMAAKRPGIAFIRPPG-HHAMPDEGCGFCIFNNVAIAAKAAIQNGQKVLIVDYDVHA 176

Query:   176 GDGVEEAF--YFTDRVMTVSFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKD-GIDD 231
             G+G +E         V  +S H++ +  F+P   ++ + G        IN+PL   G+ D
Sbjct:   177 GNGTQECVEQMGEGNVQLISIHRYENGHFWP---NMPQTGIYHNYKNTINLPLNTIGLTD 233

Query:   232 TSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLP 291
               +  LF  II   +  + P  +++  G D+  GD  G   ++  G A  +R +    +P
Sbjct:   234 ADYHALFTHIILPTIHAFQPDLLLVSSGFDASIGDPEGSMQVTPAGFATMIRMLIDTGIP 293

Query:   292 LLVTGGGGYTKENVARC--WTVETGILLDTELP 322
             +     GGY  + +A    W +    LL  E+P
Sbjct:   294 VAALLEGGYFLDALAADSEWVLRA--LLGEEIP 324


>WB|WBGene00007953 [details] [associations]
            symbol:hda-11 species:6239 "Caenorhabditis elegans"
            [GO:0006974 "response to DNA damage stimulus" evidence=IMP]
            [GO:0033558 "protein deacetylase activity" evidence=ISS]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0006974 eggNOG:COG0123
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 HOGENOM:HOG000280018 KO:K11418 OMA:DRGWAIN
            GeneTree:ENSGT00390000003411 GO:GO:0033558 EMBL:Z71185
            RefSeq:NP_505699.3 UniGene:Cel.36703 ProteinModelPortal:Q18477
            SMR:Q18477 IntAct:Q18477 MINT:MINT-228531 STRING:Q18477
            EnsemblMetazoa:C35A5.9 GeneID:183226 KEGG:cel:CELE_C35A5.9
            UCSC:C35A5.9 CTD:183226 WormBase:C35A5.9 InParanoid:Q18477
            NextBio:920378 Uniprot:Q18477
        Length = 334

 Score = 199 (75.1 bits), Expect = 1.8e-13, P = 1.8e-13
 Identities = 88/327 (26%), Positives = 130/327 (39%)

Query:     2 RSKDKI----SY----FYDGDVGSVYFGPNH--PMKPH--RLCMTHHLVLSYDLHKKMEI 49
             R KD+I    SY     Y  +     FG  H  P      R  +TH  +   +L     +
Sbjct:     4 RDKDEIFSLKSYQRPIVYHSEYNVTAFGIEHLHPFDSSKWRRVITH--LKEMNLITDETL 61

Query:    50 YRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIY 109
               P+     EL + H   Y++ +       Q +   E+        C +   L    ++ 
Sbjct:    62 VEPNLPTFEELTRVHDRKYLKSVRNPIKAAQIV---EIPFVGCLPPCIIESKLLHPLRLQ 118

Query:   110 AGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELL--KYHARVL 167
             AGGT+ AA          AIN  GG HHA      GFC+  D+ + I +L   K  A  +
Sbjct:   119 AGGTVLAANLALKH--GWAINVGGGFHHASHSGGGGFCFYADITMAIFDLFDKKAIANAI 176

Query:   168 YIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKD 227
              +D+D H G+G   A  F D      F  F    +P   + ++   R     A++V    
Sbjct:   177 VVDLDAHQGNG--HARDFADNPNVFVFDVFNPYVYPHDREARQFINR-----AVHV--NG 227

Query:   228 GIDDTSF-TRLFKTIISKVVE---TYAPGA--IVLQCGADSLAGDRLGCFNLS---IDGH 278
                DTS+ + L K +   +++   T  PG   I+   G D L GD LG   LS   I   
Sbjct:   228 HTTDTSYLSELRKQLAQCLIDREKTTPPGFDFIMFNAGTDCLLGDPLGAMKLSPQCIIAR 287

Query:   279 AECV-RFVKKFNLPLLVTGGGGYTKEN 304
              E V    K   +P+ +   GGY K+N
Sbjct:   288 DEVVFNLAKSKGIPICMVTSGGYQKDN 314


>UNIPROTKB|Q18477 [details] [associations]
            symbol:hda-11 "Protein HDA-11" species:6239 "Caenorhabditis
            elegans" [GO:0006476 "protein deacetylation" evidence=ISS]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0006974 eggNOG:COG0123
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 HOGENOM:HOG000280018 KO:K11418 OMA:DRGWAIN
            GeneTree:ENSGT00390000003411 GO:GO:0033558 EMBL:Z71185
            RefSeq:NP_505699.3 UniGene:Cel.36703 ProteinModelPortal:Q18477
            SMR:Q18477 IntAct:Q18477 MINT:MINT-228531 STRING:Q18477
            EnsemblMetazoa:C35A5.9 GeneID:183226 KEGG:cel:CELE_C35A5.9
            UCSC:C35A5.9 CTD:183226 WormBase:C35A5.9 InParanoid:Q18477
            NextBio:920378 Uniprot:Q18477
        Length = 334

 Score = 199 (75.1 bits), Expect = 1.8e-13, P = 1.8e-13
 Identities = 88/327 (26%), Positives = 130/327 (39%)

Query:     2 RSKDKI----SY----FYDGDVGSVYFGPNH--PMKPH--RLCMTHHLVLSYDLHKKMEI 49
             R KD+I    SY     Y  +     FG  H  P      R  +TH  +   +L     +
Sbjct:     4 RDKDEIFSLKSYQRPIVYHSEYNVTAFGIEHLHPFDSSKWRRVITH--LKEMNLITDETL 61

Query:    50 YRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIY 109
               P+     EL + H   Y++ +       Q +   E+        C +   L    ++ 
Sbjct:    62 VEPNLPTFEELTRVHDRKYLKSVRNPIKAAQIV---EIPFVGCLPPCIIESKLLHPLRLQ 118

Query:   110 AGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELL--KYHARVL 167
             AGGT+ AA          AIN  GG HHA      GFC+  D+ + I +L   K  A  +
Sbjct:   119 AGGTVLAANLALKH--GWAINVGGGFHHASHSGGGGFCFYADITMAIFDLFDKKAIANAI 176

Query:   168 YIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKD 227
              +D+D H G+G   A  F D      F  F    +P   + ++   R     A++V    
Sbjct:   177 VVDLDAHQGNG--HARDFADNPNVFVFDVFNPYVYPHDREARQFINR-----AVHV--NG 227

Query:   228 GIDDTSF-TRLFKTIISKVVE---TYAPGA--IVLQCGADSLAGDRLGCFNLS---IDGH 278
                DTS+ + L K +   +++   T  PG   I+   G D L GD LG   LS   I   
Sbjct:   228 HTTDTSYLSELRKQLAQCLIDREKTTPPGFDFIMFNAGTDCLLGDPLGAMKLSPQCIIAR 287

Query:   279 AECV-RFVKKFNLPLLVTGGGGYTKEN 304
              E V    K   +P+ +   GGY K+N
Sbjct:   288 DEVVFNLAKSKGIPICMVTSGGYQKDN 314


>MGI|MGI:2158340 [details] [associations]
            symbol:Hdac10 "histone deacetylase 10" species:10090 "Mus
            musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISO] [GO:0004407 "histone
            deacetylase activity" evidence=ISO] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0006476 "protein
            deacetylation" evidence=ISO] [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0016575 "histone deacetylation" evidence=ISO]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0019899 "enzyme
            binding" evidence=ISO] [GO:0031078 "histone deacetylase activity
            (H3-K14 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
            deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0032129
            "histone deacetylase activity (H3-K9 specific)" evidence=IEA]
            [GO:0033558 "protein deacetylase activity" evidence=ISO]
            [GO:0034739 "histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0042826 "histone deacetylase binding"
            evidence=ISO] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISO] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] Pfam:PF00850 MGI:MGI:2158340 INTERPRO:IPR000286
            GO:GO:0005737 GO:GO:0006355 GO:GO:0006351 EMBL:CH466550
            GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123 KO:K11407
            GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892 OMA:GLEQRCL
            OrthoDB:EOG40P464 ChiTaRS:HDAC10 GO:GO:0004407 EMBL:AC113069
            EMBL:BC064018 IPI:IPI00396751 RefSeq:NP_954668.2 UniGene:Mm.203954
            ProteinModelPortal:Q6P3E7 STRING:Q6P3E7 PhosphoSite:Q6P3E7
            PRIDE:Q6P3E7 Ensembl:ENSMUST00000082197 GeneID:170787
            KEGG:mmu:170787 UCSC:uc007xfj.2 GeneTree:ENSGT00530000062809
            HOGENOM:HOG000225183 InParanoid:Q6P3E7 NextBio:370419
            CleanEx:MM_HDAC10 Genevestigator:Q6P3E7
            GermOnline:ENSMUSG00000062906 Uniprot:Q6P3E7
        Length = 666

 Score = 206 (77.6 bits), Expect = 1.9e-13, P = 1.9e-13
 Identities = 73/282 (25%), Positives = 129/282 (45%)

Query:    59 ELAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFE-NLFEFCQIYAGGTIDAA 117
             EL   HS +Y+  + +    TQ L ++EL   +   +   F  + F   ++ AG  +   
Sbjct:    59 ELGLVHSPEYIALVQK----TQTLDKEELHALSKQYNAVYFHPDTFHCARLAAGAALQLV 114

Query:   118 RR-LNNQLCD-IAINWAGGLHHAKKCEASGFCYINDLVLGILELL-KYHA-RVLYIDIDV 173
                L   + + +A+    G HH+++  A+GFC  N++ L       KY   R+L +D DV
Sbjct:   115 DAVLTGAVHNGLALVRPPG-HHSQRAAANGFCVFNNVALAAKHAKQKYGLQRILIVDWDV 173

Query:   174 HHGDGVEEAFYFTDRVMTVSFHKF--GDLF-FPGTGDVKEIGEREGKFYAINVPLKD-GI 229
             HHG G++  F     V+  S+H++  G  + F    D   +G+ +G+ + +N+P    G+
Sbjct:   174 HHGQGIQYIFNDDPSVLYFSWHRYEHGSFWPFLPESDADAVGQGQGQGFTVNLPWNQVGM 233

Query:   230 DDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFN 289
              +  +   F  ++  +   + P  +++  G DS  GD  G     +    EC  F     
Sbjct:   234 GNADYLAAFLHVLLPLAFEFDPELVLVSAGFDSAIGDPEG----QMQATPEC--FAHLTQ 287

Query:   290 LPLLVTGG-------GGYTKENVAR--CWTVETGILLDTELP 322
             L  ++ GG       GGY  E++A+  C  V+T +L D   P
Sbjct:   288 LLQVLAGGRICAVLEGGYHLESLAQSVCMMVQT-LLGDPTPP 328


>MGI|MGI:2385252 [details] [associations]
            symbol:Hdac11 "histone deacetylase 11" species:10090 "Mus
            musculus" [GO:0000118 "histone deacetylase complex"
            evidence=ISO;TAS] [GO:0004407 "histone deacetylase activity"
            evidence=ISO;TAS] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=ISO;TAS] [GO:0005737 "cytoplasm"
            evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
            binding" evidence=TAS] [GO:0014003 "oligodendrocyte development"
            evidence=ISO] [GO:0016568 "chromatin modification" evidence=TAS]
            [GO:0016575 "histone deacetylation" evidence=ISO] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0031078 "histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0032041
            "NAD-dependent histone deacetylase activity (H3-K14 specific)"
            evidence=IEA] [GO:0032129 "histone deacetylase activity (H3-K9
            specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
            (H4-K16 specific)" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0070932 "histone H3 deacetylation" evidence=IEA]
            [GO:0070933 "histone H4 deacetylation" evidence=IEA] Pfam:PF00850
            MGI:MGI:2385252 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0005737
            GO:GO:0006355 GO:GO:0006351 GO:GO:0008134 GO:GO:0014003
            GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
            GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 GO:GO:0004407 CTD:79885 HOGENOM:HOG000280018
            HOVERGEN:HBG051893 KO:K11418 OMA:DRGWAIN EMBL:BC016208
            IPI:IPI00127900 RefSeq:NP_659168.1 UniGene:Mm.206218
            ProteinModelPortal:Q91WA3 SMR:Q91WA3 MINT:MINT-5006804
            STRING:Q91WA3 PhosphoSite:Q91WA3 PaxDb:Q91WA3 PRIDE:Q91WA3
            DNASU:232232 Ensembl:ENSMUST00000041736 GeneID:232232
            KEGG:mmu:232232 GeneTree:ENSGT00390000003411 InParanoid:Q91WA3
            OrthoDB:EOG4PVNZV BindingDB:Q91WA3 ChEMBL:CHEMBL5143 NextBio:381006
            Bgee:Q91WA3 CleanEx:MM_HDAC11 Genevestigator:Q91WA3
            GermOnline:ENSMUSG00000034245 Uniprot:Q91WA3
        Length = 347

 Score = 199 (75.1 bits), Expect = 2.2e-13, P = 2.2e-13
 Identities = 61/199 (30%), Positives = 90/199 (45%)

Query:   111 GGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGI---LELLKYHARVL 167
             GGTI A +    +    AIN  GG HH       GFC   D+ L I    E ++  +R  
Sbjct:   119 GGTIMAGKLAVER--GWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRAT 176

Query:   168 YIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKD 227
              ID+D H G+G E  F    RV  +    +    +PG    KE   R+       V L+ 
Sbjct:   177 IIDLDAHQGNGHERDFMGDKRVYIMDV--YNRHIYPGDRFAKEAIRRK-------VELEW 227

Query:   228 GIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDG---HAECV-R 283
             G +D  +    +  + + ++ + P  +V   G D L GDRLG  ++S  G     E V R
Sbjct:   228 GTEDEEYLEKVERNVRRSLQEHLPDVVVYNAGTDVLEGDRLGGLSISPAGIVKRDEVVFR 287

Query:   284 FVKKFNLPLLVTGGGGYTK 302
              V+  ++P+L+   GGY K
Sbjct:   288 VVRAHDIPILMVTSGGYQK 306


>RGD|1311706 [details] [associations]
            symbol:Hdac11 "histone deacetylase 11" species:10116 "Rattus
            norvegicus" [GO:0000118 "histone deacetylase complex"
            evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
            [GO:0004407 "histone deacetylase activity" evidence=IEA;ISO]
            [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005886 "plasma
            membrane" evidence=IEA;ISO] [GO:0014003 "oligodendrocyte
            development" evidence=IMP] [GO:0016575 "histone deacetylation"
            evidence=ISO] Pfam:PF00850 RGD:1311706 INTERPRO:IPR000286
            GO:GO:0005886 GO:GO:0005634 GO:GO:0014003 EMBL:CH473957
            GO:GO:0000118 eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 CTD:79885
            HOGENOM:HOG000280018 HOVERGEN:HBG051893 KO:K11418 OMA:DRGWAIN
            GeneTree:ENSGT00390000003411 OrthoDB:EOG4PVNZV EMBL:BC166430
            IPI:IPI00358372 RefSeq:NP_001100080.2 UniGene:Rn.28065
            STRING:B2GUW3 Ensembl:ENSRNOT00000008962 GeneID:297453
            KEGG:rno:297453 UCSC:RGD:1311706 NextBio:642285
            Genevestigator:B2GUW3 Uniprot:B2GUW3
        Length = 347

 Score = 199 (75.1 bits), Expect = 2.2e-13, P = 2.2e-13
 Identities = 61/199 (30%), Positives = 90/199 (45%)

Query:   111 GGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGI---LELLKYHARVL 167
             GGTI A +    +    AIN  GG HH       GFC   D+ L I    E ++  +R  
Sbjct:   119 GGTIMAGKLAVER--GWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRAT 176

Query:   168 YIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKD 227
              ID+D H G+G E  F    RV  +    +    +PG    KE   R+       V L+ 
Sbjct:   177 IIDLDAHQGNGHERDFMGDKRVYIMDV--YNRHIYPGDRFAKEAIRRK-------VELEW 227

Query:   228 GIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDG---HAECV-R 283
             G +D  +    +  + + ++ + P  +V   G D L GDRLG  ++S  G     E V R
Sbjct:   228 GTEDEEYLEKVERNVRRSLQEHLPDVVVYNAGTDVLEGDRLGGLSISPAGIVKRDEVVFR 287

Query:   284 FVKKFNLPLLVTGGGGYTK 302
              V+  ++P+L+   GGY K
Sbjct:   288 VVRAHDIPILMVTSGGYQK 306


>UNIPROTKB|E5RFI6 [details] [associations]
            symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
            chromatin" evidence=IEA] [GO:0000792 "heterochromatin"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005657
            "replication fork" evidence=IEA] [GO:0005667 "transcription factor
            complex" evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0009913 "epidermal cell
            differentiation" evidence=IEA] [GO:0010977 "negative regulation of
            neuron projection development" evidence=IEA] [GO:0016358 "dendrite
            development" evidence=IEA] [GO:0017053 "transcriptional repressor
            complex" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
            [GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
            "chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
            dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
            morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
            apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
            of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
            "positive regulation of sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
            formation" evidence=IEA] [GO:0061029 "eyelid development in
            camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
            formation" evidence=IEA] [GO:0090090 "negative regulation of
            canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
            "regulation of protein deacetylation" evidence=IEA]
            InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
            GO:GO:0016358 GO:GO:0003700 GO:GO:0005667 GO:GO:0000122
            GO:GO:0000790 GO:GO:0048714 GO:GO:0042475 GO:GO:0090090
            GO:GO:0042733 GO:GO:0061029 GO:GO:0031490 GO:GO:0009913
            GO:GO:0000792 GO:GO:0005657 GO:GO:0060789 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0010977 GO:GO:0061198
            GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
            IPI:IPI00976946 ProteinModelPortal:E5RFI6 SMR:E5RFI6
            Ensembl:ENST00000520895 ArrayExpress:E5RFI6 Bgee:E5RFI6
            Uniprot:E5RFI6
        Length = 60

 Score = 181 (68.8 bits), Expect = 2.7e-13, P = 2.7e-13
 Identities = 31/53 (58%), Positives = 43/53 (81%)

Query:    26 MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPD 78
             MKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS +Y++FL  I PD
Sbjct:     1 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRPD 53


>UNIPROTKB|F1PSI9 [details] [associations]
            symbol:HDAC11 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
            [GO:0004407 "histone deacetylase activity" evidence=IEA]
            [GO:0000118 "histone deacetylase complex" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0000118
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 GO:GO:0004407 OMA:DRGWAIN
            GeneTree:ENSGT00390000003411 EMBL:AAEX03012038 EMBL:AAEX03012039
            Ensembl:ENSCAFT00000007075 Uniprot:F1PSI9
        Length = 319

 Score = 196 (74.1 bits), Expect = 3.2e-13, P = 3.2e-13
 Identities = 60/199 (30%), Positives = 89/199 (44%)

Query:   111 GGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGI---LELLKYHARVL 167
             GGTI A +    +    AIN  GG HH       GFC   D+ L I    E ++  +R  
Sbjct:    91 GGTIMAGKLAMER--GWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRAT 148

Query:   168 YIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKD 227
              +D+D H G+G E  F    RV  +    +    +PG    K+   R+       V L+ 
Sbjct:   149 IVDLDAHQGNGHERDFMGDKRVYIMDV--YNRHIYPGDRFAKQAIRRK-------VELEW 199

Query:   228 GIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDG---HAECV-R 283
             G +D  +    +  + K ++ + P  +V   G D L GDRLG  ++S  G     E V R
Sbjct:   200 GTEDDEYLDKVERNLQKALQEHLPDVVVYNAGTDILEGDRLGGLSISPQGIVKRDELVFR 259

Query:   284 FVKKFNLPLLVTGGGGYTK 302
              V+   +P+L+   GGY K
Sbjct:   260 VVRGRQVPILMVTSGGYQK 278


>UNIPROTKB|E7ETT9 [details] [associations]
            symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
            sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
            evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
            GO:GO:0016787 GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AC027124 HGNC:HGNC:19086
            IPI:IPI00925544 ProteinModelPortal:E7ETT9 SMR:E7ETT9
            Ensembl:ENST00000437379 ArrayExpress:E7ETT9 Bgee:E7ETT9
            Uniprot:E7ETT9
        Length = 319

 Score = 195 (73.7 bits), Expect = 4.2e-13, P = 4.2e-13
 Identities = 62/199 (31%), Positives = 89/199 (44%)

Query:   111 GGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGI---LELLKYHARVL 167
             GGTI A +    +    AIN  GG HH       GFC   D+ L I    E ++  +R  
Sbjct:    91 GGTIMAGKLAVER--GWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRAT 148

Query:   168 YIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKD 227
              ID+D H G+G E  F    RV  +    +    +PG    K+   R+       V L+ 
Sbjct:   149 IIDLDAHQGNGHERDFMDDKRVYIMDV--YNRHIYPGDRFAKQAIRRK-------VELEW 199

Query:   228 GIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDG---HAECV-R 283
             G +D  +    +  I K ++ + P  +V   G D L GDRLG  ++S  G     E V R
Sbjct:   200 GTEDDEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDELVFR 259

Query:   284 FVKKFNLPLLVTGGGGYTK 302
              V+   +P+L+   GGY K
Sbjct:   260 MVRGRRVPILMVTSGGYQK 278


>UNIPROTKB|Q9GKU5 [details] [associations]
            symbol:HDAC11 "Histone deacetylase 11" species:9541 "Macaca
            fascicularis" [GO:0000118 "histone deacetylase complex"
            evidence=TAS] [GO:0004407 "histone deacetylase activity"
            evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0005737
            "cytoplasm" evidence=TAS] [GO:0008134 "transcription factor
            binding" evidence=TAS] [GO:0016568 "chromatin modification"
            evidence=TAS] [GO:0016575 "histone deacetylation" evidence=TAS]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
            GO:GO:0006351 GO:GO:0008134 GO:GO:0070932 GO:GO:0070933
            GO:GO:0000118 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 HOVERGEN:HBG051893
            EMBL:AB052134 ProteinModelPortal:Q9GKU5 Uniprot:Q9GKU5
        Length = 347

 Score = 196 (74.1 bits), Expect = 5.0e-13, P = 5.0e-13
 Identities = 62/199 (31%), Positives = 90/199 (45%)

Query:   111 GGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGI---LELLKYHARVL 167
             GGTI A +    +    AIN  GG HH       GFC   D+ L I    E ++  +R  
Sbjct:   119 GGTIMAGKLAVER--GWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRAT 176

Query:   168 YIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKD 227
              ID+D H G+G E  F    RV  +    +    +PG    K+   R+       V L+ 
Sbjct:   177 IIDLDAHQGNGHERDFMDDKRVYIMDV--YNRHIYPGDRFAKQAIRRK-------VELEW 227

Query:   228 GIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDG---HAECV-R 283
             G +D  +    +  I K ++ + P  +V   G D L GDRLG  ++S  G     E V R
Sbjct:   228 GTEDDEYLDKVERNIEKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDELVFR 287

Query:   284 FVKKFNLPLLVTGGGGYTK 302
              V+  ++P+L+   GGY K
Sbjct:   288 MVRGRHVPILMVTSGGYQK 306


>UNIPROTKB|Q96DB2 [details] [associations]
            symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
            sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0032041 "NAD-dependent histone deacetylase
            activity (H3-K14 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] [GO:0014003 "oligodendrocyte development"
            evidence=IEA] [GO:0000118 "histone deacetylase complex"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0016568
            "chromatin modification" evidence=TAS] [GO:0004407 "histone
            deacetylase activity" evidence=IDA] [GO:0016575 "histone
            deacetylation" evidence=IDA] [GO:0008134 "transcription factor
            binding" evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005886
            Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
            GO:GO:0006355 GO:GO:0006351 GO:GO:0008134
            Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0014003
            GO:GO:0070932 GO:GO:0070933 GO:GO:0000118 eggNOG:COG0123
            GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 BRENDA:3.5.1.98 GO:GO:0004407 EMBL:AK025426
            EMBL:AK025890 EMBL:AK293223 EMBL:AC027124 EMBL:BC009676
            EMBL:AL137362 IPI:IPI00304324 IPI:IPI01013583 RefSeq:NP_001129513.1
            RefSeq:NP_079103.2 UniGene:Hs.404802 ProteinModelPortal:Q96DB2
            SMR:Q96DB2 IntAct:Q96DB2 MINT:MINT-1411829 STRING:Q96DB2
            PhosphoSite:Q96DB2 DMDM:26394832 PaxDb:Q96DB2 PRIDE:Q96DB2
            DNASU:79885 Ensembl:ENST00000295757 Ensembl:ENST00000522202
            GeneID:79885 KEGG:hsa:79885 UCSC:uc003bxy.3 CTD:79885
            GeneCards:GC03P013496 HGNC:HGNC:19086 MIM:607226 neXtProt:NX_Q96DB2
            PharmGKB:PA38793 HOGENOM:HOG000280018 HOVERGEN:HBG051893
            InParanoid:Q96DB2 KO:K11418 OMA:DRGWAIN PhylomeDB:Q96DB2
            BindingDB:Q96DB2 ChEMBL:CHEMBL3310 GenomeRNAi:79885 NextBio:69691
            ArrayExpress:Q96DB2 Bgee:Q96DB2 CleanEx:HS_HDAC11
            Genevestigator:Q96DB2 GermOnline:ENSG00000163517 Uniprot:Q96DB2
        Length = 347

 Score = 195 (73.7 bits), Expect = 6.5e-13, P = 6.5e-13
 Identities = 62/199 (31%), Positives = 89/199 (44%)

Query:   111 GGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGI---LELLKYHARVL 167
             GGTI A +    +    AIN  GG HH       GFC   D+ L I    E ++  +R  
Sbjct:   119 GGTIMAGKLAVER--GWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRAT 176

Query:   168 YIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKD 227
              ID+D H G+G E  F    RV  +    +    +PG    K+   R+       V L+ 
Sbjct:   177 IIDLDAHQGNGHERDFMDDKRVYIMDV--YNRHIYPGDRFAKQAIRRK-------VELEW 227

Query:   228 GIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDG---HAECV-R 283
             G +D  +    +  I K ++ + P  +V   G D L GDRLG  ++S  G     E V R
Sbjct:   228 GTEDDEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRLGGLSISPAGIVKRDELVFR 287

Query:   284 FVKKFNLPLLVTGGGGYTK 302
              V+   +P+L+   GGY K
Sbjct:   288 MVRGRRVPILMVTSGGYQK 306


>UNIPROTKB|E5RK19 [details] [associations]
            symbol:HDAC2 "Histone deacetylase 2" species:9606 "Homo
            sapiens" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
            chromatin" evidence=IEA] [GO:0000792 "heterochromatin"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005657
            "replication fork" evidence=IEA] [GO:0005667 "transcription factor
            complex" evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0009913 "epidermal cell
            differentiation" evidence=IEA] [GO:0010977 "negative regulation of
            neuron projection development" evidence=IEA] [GO:0016358 "dendrite
            development" evidence=IEA] [GO:0017053 "transcriptional repressor
            complex" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
            [GO:0021766 "hippocampus development" evidence=IEA] [GO:0031490
            "chromatin DNA binding" evidence=IEA] [GO:0042475 "odontogenesis of
            dentin-containing tooth" evidence=IEA] [GO:0042733 "embryonic digit
            morphogenesis" evidence=IEA] [GO:0043066 "negative regulation of
            apoptotic process" evidence=IEA] [GO:0048714 "positive regulation
            of oligodendrocyte differentiation" evidence=IEA] [GO:0051091
            "positive regulation of sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0060789 "hair follicle placode
            formation" evidence=IEA] [GO:0061029 "eyelid development in
            camera-type eye" evidence=IEA] [GO:0061198 "fungiform papilla
            formation" evidence=IEA] [GO:0090090 "negative regulation of
            canonical Wnt receptor signaling pathway" evidence=IEA] [GO:0090311
            "regulation of protein deacetylation" evidence=IEA]
            InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0017053 GO:GO:0021766 GO:GO:0043066 GO:GO:0008284
            GO:GO:0016358 GO:GO:0003700 GO:GO:0005667 GO:GO:0000122
            GO:GO:0000790 GO:GO:0048714 GO:GO:0042475 GO:GO:0090090
            GO:GO:0042733 GO:GO:0061029 GO:GO:0031490 GO:GO:0009913
            GO:GO:0000792 GO:GO:0005657 GO:GO:0060789 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 GO:GO:0010977 GO:GO:0061198
            GO:GO:0004407 EMBL:AL590398 EMBL:AL671967 HGNC:HGNC:4853
            IPI:IPI00976604 ProteinModelPortal:E5RK19 SMR:E5RK19
            Ensembl:ENST00000524334 ArrayExpress:E5RK19 Bgee:E5RK19
            Uniprot:E5RK19
        Length = 52

 Score = 175 (66.7 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 30/52 (57%), Positives = 42/52 (80%)

Query:    26 MKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITP 77
             MKPHR+ MTH+L+L+Y L++KMEIYRPHKA   E+ ++HS +Y++FL  I P
Sbjct:     1 MKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKYHSDEYIKFLRSIRP 52


>FB|FBgn0041210 [details] [associations]
            symbol:HDAC4 "HDAC4" species:7227 "Drosophila melanogaster"
            [GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
            [GO:0000118 "histone deacetylase complex" evidence=IEA] [GO:0016568
            "chromatin modification" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IDA]
            InterPro:IPR017320 PIRSF:PIRSF037911 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
            GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 FlyBase:FBgn0041210
            EMBL:AF538714 ProteinModelPortal:Q8I9J6 SMR:Q8I9J6 IntAct:Q8I9J6
            STRING:Q8I9J6 PRIDE:Q8I9J6 InParanoid:Q8I9J6 ArrayExpress:Q8I9J6
            Bgee:Q8I9J6 Uniprot:Q8I9J6
        Length = 1255

 Score = 211 (79.3 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
 Identities = 46/150 (30%), Positives = 80/150 (53%)

Query:   136 HHAKKCEASGFCYINDLVLGILELLKYHA----RVLYIDIDVHHGDGVEEAFYFTDRVMT 191
             HHA+   A GFC+ N + +   +LL+       R+L +D DVHHG+G ++AFY +  ++ 
Sbjct:   970 HHAEANLAMGFCFFNSIAIAA-KLLRQRMPEVRRILIVDWDVHHGNGTQQAFYQSPDILY 1028

Query:   192 VSFHKFGD-LFFPGTGDVKEIGEREGKFYAINVP----LKDGIDDTSFTRLFKTIISKVV 246
             +S H+  D  FFPGTG   E G   G  + +N+     L   + D  +   F+T++  + 
Sbjct:  1029 LSIHRHDDGNFFPGTGGPTECGSGAGLGFNVNISWSGALNPPLGDAEYIAAFRTVVMPIA 1088

Query:   247 ETYAPGAIVLQCGADSLAGDR--LGCFNLS 274
              ++ P  +++  G D+  G    LG +++S
Sbjct:  1089 RSFNPDIVLVSSGFDAATGHPAPLGGYHVS 1118

 Score = 37 (18.1 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
 Identities = 8/25 (32%), Positives = 13/25 (52%)

Query:    57 PVELAQFHSADYVEFLHRITPDTQH 81
             P  +A   SAD++  ++   P  QH
Sbjct:   772 PAPIATSSSADHIPPVNLSLPHRQH 796


>UNIPROTKB|F1SPG6 [details] [associations]
            symbol:F1SPG6 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0016787 "hydrolase activity" evidence=IEA] Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            GeneTree:ENSGT00390000003411 EMBL:CU928273
            Ensembl:ENSSSCT00000012705 OMA:KVETNIR Uniprot:F1SPG6
        Length = 382

 Score = 193 (73.0 bits), Expect = 1.6e-12, P = 1.6e-12
 Identities = 55/182 (30%), Positives = 81/182 (44%)

Query:   128 AINWAGGLHHAKKCEASGFCYINDLVLGI---LELLKYHARVLYIDIDVHHGDGVEEAFY 184
             AIN  GG HH       GFC   D+ L I    E ++  +R   ID+D H G+G E  F 
Sbjct:   133 AINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRATIIDLDAHQGNGHERDFM 192

Query:   185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
                RV  +    +    +PG    K+   R+       V L+   +D  +    +  + K
Sbjct:   193 GDKRVYIMDV--YNRHIYPGDRFAKQAIRRK-------VELEWATEDDEYLTKVERNLEK 243

Query:   245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDG---HAECV-RFVKKFNLPLLVTGGGGY 300
              ++ + P  +V   G D L GDRLG  ++S  G     E V R V+   +P+L+   GGY
Sbjct:   244 ALQEHRPDVVVYNAGTDVLEGDRLGGLSISPQGIVKRDELVFRMVRSLQVPILMVTSGGY 303

Query:   301 TK 302
              K
Sbjct:   304 QK 305


>UNIPROTKB|F1MWX4 [details] [associations]
            symbol:HDAC11 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0004407
            "histone deacetylase activity" evidence=IEA] [GO:0000118 "histone
            deacetylase complex" evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005886 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407 OMA:DRGWAIN
            GeneTree:ENSGT00390000003411 EMBL:DAAA02054625 IPI:IPI00867168
            Ensembl:ENSBTAT00000009482 Uniprot:F1MWX4
        Length = 386

 Score = 193 (73.0 bits), Expect = 1.6e-12, P = 1.6e-12
 Identities = 59/199 (29%), Positives = 90/199 (45%)

Query:   111 GGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGI---LELLKYHARVL 167
             GGTI A +   ++    AIN  GG HH       GFC   D+ L I    + ++  ++  
Sbjct:   118 GGTIMAGKLAVDR--GWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFDRVEGISKAT 175

Query:   168 YIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKD 227
              +D+D H G+G E  F    RV  +    +    +PG    K+   R+       V L+ 
Sbjct:   176 IVDLDAHQGNGHERDFMGDKRVYIMDV--YNRHIYPGDRFAKQAIRRK-------VELEW 226

Query:   228 GIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDG---HAECV-R 283
             G +D  + +  +  + K ++ + P  +V   G D L GDRLG   +S  G     E V R
Sbjct:   227 GTEDDEYLQKVERNLEKALQEHRPDIVVYNAGTDILEGDRLGGLAISPQGVVKRDELVFR 286

Query:   284 FVKKFNLPLLVTGGGGYTK 302
              V+   LP+L+   GGY K
Sbjct:   287 IVRGRQLPILMVTSGGYQK 305


>UNIPROTKB|Q48DS3 [details] [associations]
            symbol:PSPPH_4352 "Histone deacetylase family protein"
            species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
            [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
            EMBL:CP000058 GenomeReviews:CP000058_GR eggNOG:COG0123
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 HOGENOM:HOG000280019 OMA:HRFPMRK RefSeq:YP_276468.1
            STRING:Q48DS3 GeneID:3556004 KEGG:psp:PSPPH_4352 PATRIC:19978189
            ProtClustDB:CLSK909647 Uniprot:Q48DS3
        Length = 305

 Score = 189 (71.6 bits), Expect = 1.7e-12, P = 1.7e-12
 Identities = 83/297 (27%), Positives = 129/297 (43%)

Query:    20 FGPNH--PMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVE-LAQFHSADYVEFLHRIT 76
             F  +H  PM   RL +  +LV S  L   +++ RP    P + LA  H   Y+     + 
Sbjct:    15 FPADHRFPMDKFRL-LRDYLVDS-GLTSDVQLMRPELC-PADILALAHDPSYIS--RYLN 69

Query:    77 PDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLH 136
              D   L R++  +  L    P  E L        GG++  A +       +A + AGG H
Sbjct:    70 GD---LSREDQRRLGL----PWSEALARRTVSAVGGSLLTAEQALKH--GMACHLAGGTH 120

Query:   137 HAKKCEASGFCYINDLVLGILELLKYHARV---LYIDIDVHHGDGVEEAFYFTDRVMTVS 193
             HA     +GFC  NDL + I + L    RV   L  D DVH GDG       T+  +TVS
Sbjct:   121 HAHYDYPAGFCIFNDLAV-ISQYLLQSGRVDKVLIFDCDVHQGDGTARILADTEDAITVS 179

Query:   194 FHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGA 253
              H   +  FP         + +  +   ++PL  G+ D ++  +   +++ ++  Y P  
Sbjct:   180 LHC--EKNFPAR-------KAQSDW---DIPLPMGMGDANYLNVVDDLLNYLLPFYKPDL 227

Query:   254 IVLQCGADSLAGDRLGCFNLSIDGHA---ECV-RFVKKFNLPLLVTGGGGYTKENVA 306
             ++   G D    D LG   L+  G A   E V R     ++P++   GGGY+K+  A
Sbjct:   228 VLYDAGVDVHKDDALGYLQLTDQGVANRDEAVLRHCLSRDIPVMGVIGGGYSKDRQA 284


>RGD|1305874 [details] [associations]
            symbol:Hdac10 "histone deacetylase 10" species:10116 "Rattus
            norvegicus" [GO:0000118 "histone deacetylase complex"
            evidence=IEA;ISO] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0003674
            "molecular_function" evidence=ND] [GO:0004407 "histone deacetylase
            activity" evidence=ISO] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005654
            "nucleoplasm" evidence=ISO] [GO:0005737 "cytoplasm"
            evidence=IEA;ISO] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISO] [GO:0006476 "protein deacetylation"
            evidence=ISO] [GO:0014003 "oligodendrocyte development"
            evidence=IEP] [GO:0016575 "histone deacetylation" evidence=ISO]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0019899 "enzyme
            binding" evidence=ISO] [GO:0032041 "NAD-dependent histone
            deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0033558
            "protein deacetylase activity" evidence=ISO] [GO:0042826 "histone
            deacetylase binding" evidence=IEA;ISO] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=ISO]
            [GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
            specific)" evidence=IEA] [GO:0046970 "NAD-dependent histone
            deacetylase activity (H4-K16 specific)" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] Pfam:PF00850 RGD:1305874 INTERPRO:IPR000286
            GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0006351
            GO:GO:0014003 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123 KO:K11407
            GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892
            GeneTree:ENSGT00530000062809 HOGENOM:HOG000225183 EMBL:BC092573
            IPI:IPI00563483 RefSeq:NP_001030172.1 UniGene:Rn.107028
            ProteinModelPortal:Q569C4 STRING:Q569C4 PRIDE:Q569C4
            Ensembl:ENSRNOT00000055865 GeneID:362981 KEGG:rno:362981
            NextBio:682020 ArrayExpress:Q569C4 Genevestigator:Q569C4
            GermOnline:ENSRNOG00000031915 Uniprot:Q569C4
        Length = 588

 Score = 196 (74.1 bits), Expect = 2.0e-12, P = 2.0e-12
 Identities = 64/254 (25%), Positives = 115/254 (45%)

Query:    28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQEL 87
             P RL      +    L ++ +     +A   EL   HS +Y+  + +    TQ L ++EL
Sbjct:    28 PERLTAALDGLRQRGLEERCQCLSVCEASEEELGLVHSPEYIALVQK----TQTLDKEEL 83

Query:    88 TKYNLGEDCPVFE-NLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGL-----HHAKKC 141
                +   D   F  + F   ++ AG    AA RL + +   A++    L     HH+++ 
Sbjct:    84 HTLSKQYDAVYFHPDTFHCARLAAG----AALRLVDAVLTGAVHNGVALVRPPGHHSQRA 139

Query:   142 EASGFCYINDLVLGILELL-KYHA-RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKF-- 197
              A+GFC  N++ +       KY   R+L +D DVHHG G++  F     V+  S+H++  
Sbjct:   140 AANGFCVFNNVAIAARHAKQKYGLQRILIVDWDVHHGQGIQYIFEDDPSVLYFSWHRYEH 199

Query:   198 GDLF-FPGTGDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETYAPGAIV 255
             G+ + F    D   +G   G+ + +N+P    G+ +  +   F  ++  +   + P  ++
Sbjct:   200 GNFWPFLPESDADTVGRGRGQGFTVNLPWNQVGMGNADYLAAFLHVLLPLAFEFDPELVL 259

Query:   256 LQCGADSLAGDRLG 269
             +  G DS  GD  G
Sbjct:   260 VSAGFDSAIGDPEG 273


>UNIPROTKB|F1NYW6 [details] [associations]
            symbol:HDAC11 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000118 "histone deacetylase complex"
            evidence=IEA] [GO:0004407 "histone deacetylase activity"
            evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005886 GO:GO:0000118
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 GO:GO:0004407 OMA:DRGWAIN
            GeneTree:ENSGT00390000003411 EMBL:AC145911 IPI:IPI00591364
            UniGene:Gga.11485 Ensembl:ENSGALT00000008165 NextBio:20819500
            Uniprot:F1NYW6
        Length = 357

 Score = 188 (71.2 bits), Expect = 4.7e-12, P = 4.7e-12
 Identities = 60/199 (30%), Positives = 87/199 (43%)

Query:   111 GGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGI---LELLKYHARVL 167
             GGTI A +   ++    AIN  GG HH    +  GFC   D+ L I    E +   ++  
Sbjct:   118 GGTIMAGKLAVDR--GWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVPGVSKAT 175

Query:   168 YIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKD 227
              ID+D H G+G E  F    RV  +    +    +PG G  K   +R+       V L+ 
Sbjct:   176 IIDLDAHQGNGHERDFMNDHRVYIMD--AYNRYIYPGDGFAKRAIKRK-------VELEW 226

Query:   228 GIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDG---HAECV-R 283
             G +DT + +   T +   +    P  IV   G D L GD LG   +S  G     E V +
Sbjct:   227 GTEDTEYLQKVHTHVEGALNELKPDIIVYNAGTDILDGDPLGGLAISPQGIVKRDEVVFK 286

Query:   284 FVKKFNLPLLVTGGGGYTK 302
               +   +P+L+   GGY K
Sbjct:   287 AARSRGIPILMVTSGGYQK 305


>UNIPROTKB|Q0VD49 [details] [associations]
            symbol:HDAC10 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0006476 "protein deacetylation" evidence=ISS]
            [GO:0004407 "histone deacetylase activity" evidence=ISS]
            [GO:0033558 "protein deacetylase activity" evidence=ISS]
            [GO:0000118 "histone deacetylase complex" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISS] [GO:0016575 "histone
            deacetylation" evidence=ISS] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0042826 "histone
            deacetylase binding" evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005737 GO:GO:0000122 GO:GO:0042826 GO:GO:0000118 KO:K11407
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 CTD:83933 HOVERGEN:HBG051892 OMA:GLEQRCL
            OrthoDB:EOG40P464 GO:GO:0004407 GeneTree:ENSGT00530000062809
            HOGENOM:HOG000225183 EMBL:DAAA02015043 UniGene:Bt.24581
            EMBL:BC119835 IPI:IPI00708197 RefSeq:NP_001068928.1 STRING:Q0VD49
            Ensembl:ENSBTAT00000014602 GeneID:510654 KEGG:bta:510654
            InParanoid:Q0VD49 NextBio:20869552 Uniprot:Q0VD49
        Length = 670

 Score = 193 (73.0 bits), Expect = 5.3e-12, P = 5.3e-12
 Identities = 76/313 (24%), Positives = 132/313 (42%)

Query:    28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQEL 87
             P RL      +  + L ++       +A   EL   HS +YV  L      TQ L  +EL
Sbjct:    28 PERLTTALERLQQHGLKQRCLQLVAREASEAELGLVHSPEYVALLQ----GTQALGTREL 83

Query:    88 TKYNLGEDCPVFE-NLFEFCQIYAGGTIDAARR-LNNQLCD-IAINWAGGLHHAKKCEAS 144
                +   D      + F   ++  G  +      L   + + +A+    G HH+++  A+
Sbjct:    84 QALSKEYDAVYLHPSTFHCARLAVGAALQLVDAVLTGAVRNGLALVRPPG-HHSQRATAN 142

Query:   145 GFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGD-LF 201
             GFC  N++ +      + H   R+L +D DVHHG G++  F     V+  S+H++    F
Sbjct:   143 GFCVFNNVAIAAKHAQQKHGLRRILIVDWDVHHGQGIQYIFEDDPSVLYFSWHRYEHGHF 202

Query:   202 FP--GTGDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETYAPGAIVLQC 258
             +P     D   +G   G  + +N+P    G+ +  +   F  ++  +   + P  +++  
Sbjct:   203 WPCLRESDADAVGRGRGLGFTVNLPWNQVGMGNADYVAAFLHVLLPLAFEFDPELVLVSA 262

Query:   259 GADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG-------GGYTKENVAR--CW 309
             G DS  GD  G     +    EC  F    +L  ++ GG       GGY  E++++  C 
Sbjct:   263 GFDSAIGDPEG----QMLATPEC--FAHLTHLLQVLAGGRVCAVLEGGYHLESLSQSVCM 316

Query:   310 TVETGILLDTELP 322
              V   +L D  LP
Sbjct:   317 MVRA-LLGDPALP 328


>UNIPROTKB|F1MWS5 [details] [associations]
            symbol:HDAC9 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0090050 "positive regulation of cell migration involved
            in sprouting angiogenesis" evidence=IEA] [GO:0070933 "histone H4
            deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
            evidence=IEA] [GO:0070491 "repressing transcription factor binding"
            evidence=IEA] [GO:0048742 "regulation of skeletal muscle fiber
            development" evidence=IEA] [GO:0042826 "histone deacetylase
            binding" evidence=IEA] [GO:0035097 "histone methyltransferase
            complex" evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
            evidence=IEA] [GO:0032869 "cellular response to insulin stimulus"
            evidence=IEA] [GO:0007507 "heart development" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005667 "transcription
            factor complex" evidence=IEA] [GO:0005080 "protein kinase C
            binding" evidence=IEA] [GO:0004407 "histone deacetylase activity"
            evidence=IEA] [GO:0003714 "transcription corepressor activity"
            evidence=IEA] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0000118 "histone
            deacetylase complex" evidence=IEA] InterPro:IPR017320
            PIRSF:PIRSF037911 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737
            GO:GO:0003714 GO:GO:0007507 GO:GO:0032869 GO:GO:0005667
            GO:GO:0000122 GO:GO:0070932 GO:GO:0070933 GO:GO:0048742
            GO:GO:0035097 GO:GO:0000118 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0090050 GO:GO:0004407
            GeneTree:ENSGT00530000062809 InterPro:IPR024643 Pfam:PF12203
            GO:GO:0034983 OMA:YGTNPLD EMBL:DAAA02010064 IPI:IPI00698474
            Ensembl:ENSBTAT00000004971 Uniprot:F1MWS5
        Length = 895

 Score = 194 (73.4 bits), Expect = 6.4e-12, P = 6.4e-12
 Identities = 51/177 (28%), Positives = 88/177 (49%)

Query:    78 DTQHLFRQELTKYNLGEDCPVFENLFEF---CQIYAGGTIDAARRL-NNQLCD-IAINWA 132
             D+   F   L    LG D     N        ++  G  I+ A R+ + +L +  A+   
Sbjct:   720 DSSQKFFSSLPCGGLGVDSDTIWNELHSSGAARMAVGCVIELASRVASGELKNGFAVVRP 779

Query:   133 GGLHHAKKCEASGFCYINDLVLGILELLKYH--ARVLYIDIDVHHGDGVEEAFYFTDRVM 190
              G HHA++  A GFC+ N + +    L      +++L +D+DVHHG+G ++AFY    ++
Sbjct:   780 PG-HHAEESTAMGFCFFNSVAITAKYLRDQLNISKILIVDLDVHHGNGTQQAFYADPNIL 838

Query:   191 TVSFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID----DTSFTRLFKTII 242
              +S H++ +  FFPG+G   E+G   G+ Y IN+    G+D    D  +   F+ ++
Sbjct:   839 YISLHRYDEGNFFPGSGAPNEVGTGLGEGYNINIAWTGGLDPPMGDIEYLEAFRLVL 895


>UNIPROTKB|Q8EFZ9 [details] [associations]
            symbol:SO_1815 "Histone deacetylase superfamily protein"
            species:211586 "Shewanella oneidensis MR-1" [GO:0003674
            "molecular_function" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014299
            GenomeReviews:AE014299_GR Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000280019
            RefSeq:NP_717423.1 ProteinModelPortal:Q8EFZ9 GeneID:1169588
            KEGG:son:SO_1815 PATRIC:23523253 OMA:MIRDISK ProtClustDB:CLSK906443
            Uniprot:Q8EFZ9
        Length = 304

 Score = 184 (69.8 bits), Expect = 6.8e-12, P = 6.8e-12
 Identities = 72/289 (24%), Positives = 117/289 (40%)

Query:    23 NHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHL 82
             +H     +    +  +L   L    + + P      E+ Q H  DYVE     T  T  L
Sbjct:    18 HHRFPTTKYAHLYQYLLDNQLATPTQFHTPTPMTAEEIMQVHHRDYVEQFIDGTLATSAL 77

Query:    83 FRQELTKYNLGEDCPVFENLFE-FCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKC 141
              R       +G   P  E L E      AG ++ AA  L      IA++  GG HHA   
Sbjct:    78 RR-------IG--FPWSEALVERTLHSLAGTSLTAALALQT---GIALHLTGGYHHAHYE 125

Query:   142 EASGFCYINDLVLGILELL---KYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFG 198
               SG+C  NDL++   +L+   + H ++L  D DVH GDG          +++ S H   
Sbjct:   126 FGSGYCIFNDLIIAARKLIIEQQLH-KILIFDCDVHQGDGTATLSQLHQGIISCSIHCKD 184

Query:   199 DLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQC 258
             +  FP          ++   Y  ++ L  G DD+++    +  +  ++  + P  I+   
Sbjct:   185 N--FPS--------RKQHSHY--DIELVKGTDDSAYLDTVEQTLELLIRLHQPDLILYDA 232

Query:   259 GADSLAGDRLGCFNLSIDG----HAECVRFVKKFNLPLLVTGGGGYTKE 303
             G D    D LG   +S  G        +   +  N+P+    GGGY+++
Sbjct:   233 GVDIHQDDDLGHLQISQQGLYQRDVTVLSMARAANIPVAAVIGGGYSRD 281


>TIGR_CMR|SO_1815 [details] [associations]
            symbol:SO_1815 "histone deacetylase/AcuC/AphA family
            protein" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
            "biological_process" evidence=ND] [GO:0003674 "molecular_function"
            evidence=ND] Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014299
            GenomeReviews:AE014299_GR Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000280019
            RefSeq:NP_717423.1 ProteinModelPortal:Q8EFZ9 GeneID:1169588
            KEGG:son:SO_1815 PATRIC:23523253 OMA:MIRDISK ProtClustDB:CLSK906443
            Uniprot:Q8EFZ9
        Length = 304

 Score = 184 (69.8 bits), Expect = 6.8e-12, P = 6.8e-12
 Identities = 72/289 (24%), Positives = 117/289 (40%)

Query:    23 NHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHL 82
             +H     +    +  +L   L    + + P      E+ Q H  DYVE     T  T  L
Sbjct:    18 HHRFPTTKYAHLYQYLLDNQLATPTQFHTPTPMTAEEIMQVHHRDYVEQFIDGTLATSAL 77

Query:    83 FRQELTKYNLGEDCPVFENLFE-FCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKC 141
              R       +G   P  E L E      AG ++ AA  L      IA++  GG HHA   
Sbjct:    78 RR-------IG--FPWSEALVERTLHSLAGTSLTAALALQT---GIALHLTGGYHHAHYE 125

Query:   142 EASGFCYINDLVLGILELL---KYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFG 198
               SG+C  NDL++   +L+   + H ++L  D DVH GDG          +++ S H   
Sbjct:   126 FGSGYCIFNDLIIAARKLIIEQQLH-KILIFDCDVHQGDGTATLSQLHQGIISCSIHCKD 184

Query:   199 DLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQC 258
             +  FP          ++   Y  ++ L  G DD+++    +  +  ++  + P  I+   
Sbjct:   185 N--FPS--------RKQHSHY--DIELVKGTDDSAYLDTVEQTLELLIRLHQPDLILYDA 232

Query:   259 GADSLAGDRLGCFNLSIDG----HAECVRFVKKFNLPLLVTGGGGYTKE 303
             G D    D LG   +S  G        +   +  N+P+    GGGY+++
Sbjct:   233 GVDIHQDDDLGHLQISQQGLYQRDVTVLSMARAANIPVAAVIGGGYSRD 281


>UNIPROTKB|Q4K3I0 [details] [associations]
            symbol:aphA_3 "Acetylpolyamine aminohydrolase"
            species:220664 "Pseudomonas protegens Pf-5" [GO:0006598 "polyamine
            catabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
            evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
            EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006598
            eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:YP_263203.1
            ProteinModelPortal:Q4K3I0 STRING:Q4K3I0 GeneID:3480515
            KEGG:pfl:PFL_6145 PATRIC:19881827 HOGENOM:HOG000225182 OMA:GAWARWT
            ProtClustDB:CLSK865777 BioCyc:PFLU220664:GIX8-6188-MONOMER
            Uniprot:Q4K3I0
        Length = 343

 Score = 186 (70.5 bits), Expect = 6.8e-12, P = 6.8e-12
 Identities = 46/172 (26%), Positives = 74/172 (43%)

Query:   136 HHAKKCEASGFCYINDLVLGILELLKY-HARVLYIDIDVHHGDGVEEAFYFTDRVMTVSF 194
             HHA      G+CY+N+  +     L   H +V  +D+D HHG+G +  FY    V+  S 
Sbjct:   158 HHAAGDLMGGYCYLNNAAIAAQAFLDQGHRKVAILDVDYHHGNGTQSIFYERSDVLFTSI 217

Query:   195 HKFGDLFFPG-TGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGA 253
             H   +  FP   G   E GE  G+ +  N PL  G    +++   +   +++ + Y    
Sbjct:   218 HGHPEAEFPFFLGYADECGEGAGEGFNFNYPLAAGSGWDAWSAALEQACNEI-QRYDADI 276

Query:   254 IVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
             IV+  G D+   D +  F L    +    + +     P L    GGY  E +
Sbjct:   277 IVVSLGVDTFKDDPISQFKLDSPDYLAMGKRIAALGKPTLFVMEGGYAVEEI 328


>TIGR_CMR|SPO_A0096 [details] [associations]
            symbol:SPO_A0096 "histone deacetylase/AcuC/AphA family
            protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0003824
            "catalytic activity" evidence=ISS] [GO:0008152 "metabolic process"
            evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000032
            GenomeReviews:CP000032_GR Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 OMA:PGSYEIA
            ProtClustDB:CLSK868223 RefSeq:YP_164926.1 ProteinModelPortal:Q5LLD2
            GeneID:3196911 KEGG:sil:SPOA0096 PATRIC:23381508 Uniprot:Q5LLD2
        Length = 344

 Score = 185 (70.2 bits), Expect = 9.1e-12, P = 9.1e-12
 Identities = 51/177 (28%), Positives = 84/177 (47%)

Query:    91 NLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD--IAINWAGGLHHAKKCEASGFCY 148
             N GE  P     +E   + AG    A   + +   D   A++   G HHA +  + GFC 
Sbjct:    73 NAGEFSPFGSGSYEIAALSAGLVKRAVFDVVDGTFDNAYALSRPPG-HHAMRDGSMGFCL 131

Query:   149 INDLVLGILELLKYH---ARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
             + ++ + I E  +      RV  +D DVHHG+G ++ FY  + V+T+S H+  + F PG+
Sbjct:   132 LANIAIAI-EAARAERGLTRVAVLDWDVHHGNGTQDIFYEREDVLTISIHQ-ENCFPPGS 189

Query:   206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADS 262
             G   E G   G+   +NV L  G    S+      ++   +  + P  I++ CG D+
Sbjct:   190 GSGSERGAGAGEGANLNVNLLPGAGHQSYIDAMDILVLPALHAFRPELIIVACGLDA 246


>UNIPROTKB|F1RXT2 [details] [associations]
            symbol:LOC100518786 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            GeneTree:ENSGT00530000062809 EMBL:BX321913
            Ensembl:ENSSSCT00000001061 Uniprot:F1RXT2
        Length = 677

 Score = 190 (71.9 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 78/317 (24%), Positives = 131/317 (41%)

Query:    27 KPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQE 86
             +P RL      +    L ++       +A   EL   HS +YV  L      TQ L  +E
Sbjct:    27 RPERLTTALERLRQRGLEQRCLRLVAREASEAELGLVHSPEYVALLR----GTQALSTEE 82

Query:    87 LTKYNLGEDCPVFE-NLFEFCQIYAGGT---IDA--ARRLNNQLCDIAINWAGGLHHAKK 140
             L   +   D   F  + F   ++ AG     +DA  A  + N L    +   G  HH+++
Sbjct:    83 LQALSRQFDAVYFHPSTFHCARLAAGAALQLVDAVMAGVVRNGLA--LVRPPG--HHSQR 138

Query:   141 CEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFG 198
               A+GFC  N + +      + H   R+L +D D+HHG G +  F     V+  S+H++ 
Sbjct:   139 AAANGFCVFNSVAIAAKHAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFSWHRYE 198

Query:   199 D-LFFP--GTGDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETYAPGAI 254
                F+P     D   +G   G  + +N+P    G+ +  +   F  ++  +   +    +
Sbjct:   199 HGRFWPYLRESDADTVGRGRGLGFTVNLPWNQVGMGNADYMAAFLQVLLPLAFEFNAELV 258

Query:   255 VLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG-------GGYTKENVAR 307
             ++  G DS  GD  G     +    EC  F     L  ++ GG       GGY  E++++
Sbjct:   259 LVSAGFDSAIGDSEG----QMQATPEC--FAHLTQLLQVLAGGRVCAVLEGGYHLESLSQ 312

Query:   308 --CWTVETGILLDTELP 322
               C  V+  +L D   P
Sbjct:   313 SVCMMVQA-LLGDPAPP 328


>UNIPROTKB|I3LDD6 [details] [associations]
            symbol:LOC100518786 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:GLEQRCL
            GeneTree:ENSGT00530000062809 EMBL:BX321913
            Ensembl:ENSSSCT00000029634 Uniprot:I3LDD6
        Length = 677

 Score = 190 (71.9 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 78/317 (24%), Positives = 131/317 (41%)

Query:    27 KPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQE 86
             +P RL      +    L ++       +A   EL   HS +YV  L      TQ L  +E
Sbjct:    29 RPERLTTALERLRQRGLEQRCLRLVAREASEAELGLVHSPEYVALLR----GTQALSTEE 84

Query:    87 LTKYNLGEDCPVFE-NLFEFCQIYAGGT---IDA--ARRLNNQLCDIAINWAGGLHHAKK 140
             L   +   D   F  + F   ++ AG     +DA  A  + N L    +   G  HH+++
Sbjct:    85 LQALSRQFDAVYFHPSTFHCARLAAGAALQLVDAVMAGVVRNGLA--LVRPPG--HHSQR 140

Query:   141 CEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFG 198
               A+GFC  N + +      + H   R+L +D D+HHG G +  F     V+  S+H++ 
Sbjct:   141 AAANGFCVFNSVAIAAKHAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVLYFSWHRYE 200

Query:   199 D-LFFP--GTGDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETYAPGAI 254
                F+P     D   +G   G  + +N+P    G+ +  +   F  ++  +   +    +
Sbjct:   201 HGRFWPYLRESDADTVGRGRGLGFTVNLPWNQVGMGNADYMAAFLQVLLPLAFEFNAELV 260

Query:   255 VLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG-------GGYTKENVAR 307
             ++  G DS  GD  G     +    EC  F     L  ++ GG       GGY  E++++
Sbjct:   261 LVSAGFDSAIGDSEG----QMQATPEC--FAHLTQLLQVLAGGRVCAVLEGGYHLESLSQ 314

Query:   308 --CWTVETGILLDTELP 322
               C  V+  +L D   P
Sbjct:   315 SVCMMVQA-LLGDPAPP 330


>DICTYBASE|DDB_G0280195 [details] [associations]
            symbol:hdaC "type-2 histone deacetylase"
            species:44689 "Dictyostelium discoideum" [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0097372 "NAD-dependent histone deacetylase
            activity (H3-K18 specific)" evidence=IEA] [GO:0070933 "histone H4
            deacetylation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0034739 "histone deacetylase activity (H4-K16
            specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
            (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent histone
            deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0031078
            "histone deacetylase activity (H3-K14 specific)" evidence=IEA]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0016568 "chromatin
            modification" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR017956
            SMART:SM00384 dictyBase:DDB_G0280195 Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
            GenomeReviews:CM000152_GR GO:GO:0046872 GO:GO:0003677 GO:GO:0006351
            EMBL:AAFI02000035 Gene3D:3.30.40.10 InterPro:IPR011011
            InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0070932 GO:GO:0070933
            eggNOG:COG0123 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969
            GO:GO:0046970 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 RefSeq:XP_641298.1
            ProteinModelPortal:Q54VQ7 PRIDE:Q54VQ7 EnsemblProtists:DDB0237658
            GeneID:8622431 KEGG:ddi:DDB_G0280195 OMA:NSEFETH Uniprot:Q54VQ7
        Length = 1704

 Score = 193 (73.0 bits), Expect = 1.9e-11, P = 1.9e-11
 Identities = 64/237 (27%), Positives = 101/237 (42%)

Query:   132 AGGLHHAKKCEASGFCYINDLVLGI--LELLKYHARVLYIDIDVHHGDGVEEAFYFTDRV 189
             AG         + G+C IN++ +G     L   ++R+  +D DVHHG+G +E     D  
Sbjct:  1214 AGRYGRTSDAPSQGYCLINNVAIGAKYASLTAGYSRIAVVDFDVHHGNGTQEILSGDDNF 1273

Query:   190 MTVSFHKFGD--LFFPGTG-DVKEIGEREGKFYA--INVPLKDGIDDTSFTRLFKTIISK 244
             + +S H   +   F+PGTG DV +I E  G+F    +N+ LK       F + +   I  
Sbjct:  1274 LFISIHVCDEKRYFYPGTGQDVGDIDEVSGQFDGNILNIGLKRNTGSAVFLQQWMNKIIP 1333

Query:   245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVK-------KFNLPLLVTGG 297
              +E Y P  I L  G D    D      L+ + +    + +K       K  +  ++ GG
Sbjct:  1334 RLEAYKPQLIFLSAGFDGHKDDPTNGLKLNEEDYFVITKMIKTVAFKYCKGRIISVLEGG 1393

Query:   298 GGYTKEN-VARCWTVETGILL-DTELPNEIPENEYIKYFAPECSLRIPNGHIENLNS 352
              G  K N + RC       L+ DT+    +    Y  +F+      IP  +I N  S
Sbjct:  1394 YGIEKTNSLQRCVNSHLKALIEDTDEEIHLANISY-GHFSETQETAIPKFNINNFIS 1449


>UNIPROTKB|E2RS82 [details] [associations]
            symbol:HDAC10 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0016787 "hydrolase activity" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            GeneTree:ENSGT00530000062809 EMBL:AAEX03007133
            Ensembl:ENSCAFT00000001070 Uniprot:E2RS82
        Length = 550

 Score = 184 (69.8 bits), Expect = 3.8e-11, P = 3.8e-11
 Identities = 50/199 (25%), Positives = 93/199 (46%)

Query:   136 HHAKKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVS 193
             HH+++  A+GFC  N++ +      + H   R+L +D DVHHG G++  F     V+  S
Sbjct:    16 HHSQRAAANGFCVFNNVAIAARHAQQKHGLQRILIVDWDVHHGQGIQYIFEDDPSVLYFS 75

Query:   194 FHKFGD-LFFP--GTGDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKVVETY 249
             +H++    F+P     D   +G+ +G+ + +N+P    G+ +  +   F  ++  V   +
Sbjct:    76 WHRYEHGRFWPYLRESDADAVGQGKGRGFTVNLPWNQVGMGNADYLAAFLHVLLPVAFEF 135

Query:   250 APGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG------GGYTKE 303
              P  +++  G DS  GD  G     +    EC   + +  L +L  G       GGY  E
Sbjct:   136 DPELVLVSAGFDSAIGDPEG----QMQATPECFGHLTQL-LQVLAGGRVCAVLEGGYHLE 190

Query:   304 NVARCWTVETGILLDTELP 322
             ++++   +    LL   +P
Sbjct:   191 SLSQSVCMVVRALLGDPVP 209


>UNIPROTKB|Q4KAJ1 [details] [associations]
            symbol:aphA_1 "Acetylpolyamine aminohydrolase"
            species:220664 "Pseudomonas protegens Pf-5" [GO:0006598 "polyamine
            catabolic process" evidence=ISS] [GO:0016787 "hydrolase activity"
            evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787
            EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0006598
            eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225182
            RefSeq:YP_260742.1 ProteinModelPortal:Q4KAJ1 STRING:Q4KAJ1
            GeneID:3475556 KEGG:pfl:PFL_3640 PATRIC:19876643 OMA:VMEGGYM
            ProtClustDB:CLSK937869 BioCyc:PFLU220664:GIX8-3655-MONOMER
            Uniprot:Q4KAJ1
        Length = 342

 Score = 178 (67.7 bits), Expect = 5.7e-11, P = 5.7e-11
 Identities = 44/172 (25%), Positives = 76/172 (44%)

Query:   136 HHAKKCEASGFCYINDLVLGILELLKYHAR-VLYIDIDVHHGDGVEEAFYFTDRVMTVSF 194
             HHA +    G+CY+N+  +     +   AR V  +D+D HHG+G +  FY    V+ VS 
Sbjct:   158 HHAAREYMGGYCYLNNAAIAAQHAITRGARRVAVLDVDFHHGNGTQNIFYDRGDVLFVSL 217

Query:   195 HKFGDLFFPG-TGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGA 253
             H    + +P  +G   E G   G+   +N+PL        + +  + +  K +  +AP  
Sbjct:   218 HGDPAVSYPYFSGHASERGSGAGEGCNLNLPLPKNTSWQHYRQALE-LACKQLRAFAPEL 276

Query:   254 IVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENV 305
             +V+  G D+   D +  F L  +      + +     P L    GGY  + +
Sbjct:   277 LVVSLGVDTFKDDPISHFLLESEDFLGMGQIIATVGTPTLFVMEGGYMVDEI 328


>ZFIN|ZDB-GENE-040704-7 [details] [associations]
            symbol:hdac11 "histone deacetylase 11" species:7955
            "Danio rerio" [GO:0016787 "hydrolase activity" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 ZFIN:ZDB-GENE-040704-7
            GO:GO:0016787 eggNOG:COG0123 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 CTD:79885 HOGENOM:HOG000280018
            HOVERGEN:HBG051893 KO:K11418 OrthoDB:EOG4PVNZV EMBL:BC074052
            IPI:IPI00635477 RefSeq:NP_001002171.1 UniGene:Dr.14148
            ProteinModelPortal:Q6GMJ4 STRING:Q6GMJ4 GeneID:431718
            KEGG:dre:431718 NextBio:20830954 Bgee:Q6GMJ4 Uniprot:Q6GMJ4
        Length = 366

 Score = 173 (66.0 bits), Expect = 2.6e-10, P = 2.6e-10
 Identities = 58/200 (29%), Positives = 86/200 (43%)

Query:   111 GGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGI---LELLKYHARVL 167
             GGTI A +   ++    AIN  GG HH    +  GFC   D+ L I    E ++  A   
Sbjct:   130 GGTIMAGKLAIDR--GWAINVGGGFHHCSSDKGGGFCAYADITLAIKFLFERVEGVASAT 187

Query:   168 YIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKD 227
              ID+D H G+G E  F    RV  +    +    +PG G  K   +R+       V L  
Sbjct:   188 IIDLDAHQGNGHERDFLEDRRVYIMDV--YNRHIYPGDGYAKRAIKRK-------VELDW 238

Query:   228 GIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDG---HAECV-R 283
             G +D+ + +         +    P  I+   G D L GD LG   +S  G     E + R
Sbjct:   239 GTEDSEYLQKVDLHSEGALNEARPDIIIYNAGTDILDGDPLGGLAISPQGIIKRDEIIFR 298

Query:   284 FVKKFNLPLLVTGGGGYTKE 303
               ++  +P+L+   GGY K+
Sbjct:   299 AARRRGIPILMVTSGGYQKK 318


>UNIPROTKB|I3LHJ7 [details] [associations]
            symbol:I3LHJ7 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0004407 "histone deacetylase activity" evidence=IEA]
            InterPro:IPR003084 PRINTS:PR01271 Pfam:PF00850 INTERPRO:IPR000286
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            GO:GO:0004407 GeneTree:ENSGT00530000062889
            Ensembl:ENSSSCT00000031343 Uniprot:I3LHJ7
        Length = 51

 Score = 151 (58.2 bits), Expect = 4.9e-10, P = 4.9e-10
 Identities = 25/45 (55%), Positives = 35/45 (77%)

Query:   190 MTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSF 234
             MTVS HKF   FFPGTGDV ++G  +G++Y++NVP++DGI D  +
Sbjct:     1 MTVSLHKFSPGFFPGTGDVSDVGLGKGRYYSVNVPIQDGIQDEKY 45


>UNIPROTKB|I3LTU6 [details] [associations]
            symbol:LOC100738481 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0016787 "hydrolase activity" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 OMA:DRGWAIN
            GeneTree:ENSGT00390000003411 EMBL:FP700091
            Ensembl:ENSSSCT00000024978 Uniprot:I3LTU6
        Length = 275

 Score = 163 (62.4 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 49/167 (29%), Positives = 73/167 (43%)

Query:   111 GGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGI---LELLKYHARVL 167
             GGTI A +    +    AIN  GG HH       GFC   D+ L I    E ++  +R  
Sbjct:   118 GGTIMAGKLAVER--GWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRAT 175

Query:   168 YIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKD 227
              ID+D H G+G E  F    RV  +    +    +PG    K+   R+       V L+ 
Sbjct:   176 IIDLDAHQGNGHERDFMGDKRVYIMDV--YNRHIYPGDRFAKQAIRRK-------VELEW 226

Query:   228 GIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLS 274
               +D  +    +  + K ++ + P  +V   G D L GDRLG  ++S
Sbjct:   227 ATEDDEYLTKVERNLEKALQEHRPDVVVYNAGTDVLEGDRLGGLSIS 273


>FB|FBgn0051119 [details] [associations]
            symbol:HdacX "Histone deacetylase X" species:7227 "Drosophila
            melanogaster" [GO:0004407 "histone deacetylase activity"
            evidence=ISS] [GO:0016575 "histone deacetylation" evidence=ISS]
            [GO:0000118 "histone deacetylase complex" evidence=ISS]
            Pfam:PF00850 INTERPRO:IPR000286 EMBL:AE014297 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            KO:K11418 OMA:DRGWAIN GeneTree:ENSGT00390000003411 EMBL:BT082053
            RefSeq:NP_001247296.1 RefSeq:NP_733048.1 UniGene:Dm.38242
            SMR:Q9VC26 STRING:Q9VC26 EnsemblMetazoa:FBtr0084734
            EnsemblMetazoa:FBtr0305045 GeneID:326120 KEGG:dme:Dmel_CG31119
            UCSC:CG31119-RA CTD:326120 FlyBase:FBgn0051119 InParanoid:Q9VC26
            OrthoDB:EOG4K98TW GenomeRNAi:326120 NextBio:847157 Uniprot:Q9VC26
        Length = 343

 Score = 165 (63.1 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 52/184 (28%), Positives = 79/184 (42%)

Query:   128 AINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHA----RVLYIDIDVHHGDGVEEAF 183
             AIN  GG HH       GFC   D+ L I+ L +       R++ +D+D H G+G E  F
Sbjct:   150 AINLGGGFHHCCSYRGGGFCPYADISLLIVRLFEQEPFRVRRIMIVDLDAHQGNGHERDF 209

Query:   184 YFTDRVMTVS-FHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
                + V  V  F  +    +P     KE            V L++  +D  + R  K  +
Sbjct:   210 ---NNVAAVYIFDMYNAFVYPRDHVAKES-------IRCAVELRNYTEDGFYLRQLKRCL 259

Query:   243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFV----KKFNLPLLVTGGG 298
              + +  + P  +V   G D L GD LG   +S +G  E  R V    +   +P+++   G
Sbjct:   260 MQSLAEFRPDMVVYNAGTDVLEGDPLGNLAISAEGVIERDRLVFSTFRALGIPVVMLLSG 319

Query:   299 GYTK 302
             GY K
Sbjct:   320 GYLK 323


>UNIPROTKB|H0YH91 [details] [associations]
            symbol:HDAC7 "Histone deacetylase 7" species:9606 "Homo
            sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC004466 HGNC:HGNC:14067
            ChiTaRS:HDAC7 Ensembl:ENST00000548080 Uniprot:H0YH91
        Length = 384

 Score = 168 (64.2 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
 Identities = 34/110 (30%), Positives = 60/110 (54%)

Query:   172 DVHHGDGVEEAFYFTDRVMTVSFHKFGD-LFFPGTGDVKEIGEREGKFYAINVPLKDGID 230
             DVHHG+G ++ FY    V+ +S H+  D  FFPG+G V E+G   G+ + +NV    G+D
Sbjct:   139 DVHHGNGTQQTFYQDPSVLYISLHRHDDGNFFPGSGAVDEVGAGSGEGFNVNVAWAGGLD 198

Query:   231 ----DTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR--LGCFNLS 274
                 D  +   F+ ++  +   ++P  +++  G D+  G    LG +++S
Sbjct:   199 PPMGDPEYLAAFRIVVMPIAREFSPDLVLVSAGFDAAEGHPAPLGGYHVS 248

 Score = 37 (18.1 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
 Identities = 15/54 (27%), Positives = 20/54 (37%)

Query:    24 HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITP 77
             HP    R+      +    L  + E  R  KA   EL   HS  +V  L+   P
Sbjct:    21 HPEHAGRIQSIWSRLQERGLRSQCECLRGRKASLEELQSVHSERHV-LLYGTNP 73


>UNIPROTKB|C9J8B8 [details] [associations]
            symbol:HDAC10 "Histone deacetylase 10" species:9606 "Homo
            sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AL022328
            HGNC:HGNC:18128 ChiTaRS:HDAC10 HOGENOM:HOG000225183 IPI:IPI00446419
            SMR:C9J8B8 STRING:C9J8B8 Ensembl:ENST00000448072 Uniprot:C9J8B8
        Length = 619

 Score = 165 (63.1 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
 Identities = 56/223 (25%), Positives = 99/223 (44%)

Query:    27 KPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQE 86
             +P RL      +    L ++       +A   EL   HS +YV  +     +TQ L ++E
Sbjct:    27 RPERLTAALDRLRQRGLEQRCLRLSAREASEEELGLVHSPEYVSLVR----ETQVLGKEE 82

Query:    87 LTKYNLGEDCPVFE-NLFEFCQIYAGG---TIDAARRLNNQLCD-IAINWAGGLHHAKKC 141
             L   +   D   F  + F   ++ AG     +DA   L   + + +A+    G HH ++ 
Sbjct:    83 LQALSGQFDAIYFHPSTFHCARLAAGAGLQLVDAV--LTGAVQNGLALVRPPG-HHGQRA 139

Query:   142 EASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGD 199
              A+GFC  N++ +      + H   R+L +D DVHHG G++  F     V+  S+H++  
Sbjct:   140 AANGFCVFNNVAIAAAHAKQKHGLHRILVVDWDVHHGQGIQYLFEDDPSVLYFSWHRYEH 199

Query:   200 -LFFP--GTGDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLF 238
               F+P     D   +G  +G  + +N+P    G+ +  +   F
Sbjct:   200 GRFWPFLRESDADAVGRGQGLGFTVNLPWNQVGMGNADYVAAF 242

 Score = 46 (21.3 bits), Expect = 3.5e-09, Sum P(2) = 3.5e-09
 Identities = 18/48 (37%), Positives = 24/48 (50%)

Query:   277 GHAECVRFVKKFNLPLLVTGGGGYTKENVAR--CWTVETGILLDTELP 322
             G+A+ V       LPL   GG  Y  E++A   C TV+T +L D   P
Sbjct:   234 GNADYVAAFLHLLLPLAFEGG--YHLESLAESVCMTVQT-LLGDPAPP 278


>TIGR_CMR|SPO_0250 [details] [associations]
            symbol:SPO_0250 "histone deacetylase family protein"
            species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004407 "histone
            deacetylase activity" evidence=ISS] [GO:0008152 "metabolic process"
            evidence=ISS] Pfam:PF00850 INTERPRO:IPR000286 EMBL:CP000031
            GenomeReviews:CP000031_GR Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 HOGENOM:HOG000225183 OMA:VDAFRPQ
            RefSeq:YP_165514.1 ProteinModelPortal:Q5LX39 GeneID:3196238
            KEGG:sil:SPO0250 PATRIC:23373751 ProtClustDB:CLSK767216
            Uniprot:Q5LX39
        Length = 308

 Score = 154 (59.3 bits), Expect = 2.3e-08, P = 2.3e-08
 Identities = 65/256 (25%), Positives = 100/256 (39%)

Query:    24 HPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLF 83
             HP +  RL    H +   DL +   +  P  A   +L + H A YV  +    PD     
Sbjct:    20 HPERVARLEHVLHALEPLDLRR---VTAPLAAED-DLLRIHPAGYVADIRDARPDEGFAQ 75

Query:    84 RQELTKYNLGEDCPVFEN---LFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKK 140
                 T  + G     F     +     +  GG  +A     N  C  AI   G  HHA++
Sbjct:    76 IDGDTFLSPGSVDAAFRAAGAVVRAVDMVLGG--EA----QNAFC--AIRPPG--HHAER 125

Query:   141 CEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFG 198
               A GFC   +  L     L +H   RV  +D DVHHG+G ++  +   R + ++  +  
Sbjct:   126 ETAMGFCLFGNAALAAKHALDHHGLRRVAVVDFDVHHGNGTQDLLWDEARALLITSQQMP 185

Query:   199 DLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQC 258
                +PG+G   E G   G+   +N+PL  G         +       +  + P  I++  
Sbjct:   186 --LWPGSGRPDEDGAH-GQI--VNIPLAPGTGGAEMRAAYMAQAFPRLRAFKPELIIISA 240

Query:   259 GADSLAGDRLGCFNLS 274
             G D+   D L   N S
Sbjct:   241 GFDAHQDDPLANLNWS 256


>UNIPROTKB|I3L961 [details] [associations]
            symbol:I3L961 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0016787 "hydrolase activity" evidence=IEA] Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            GeneTree:ENSGT00530000062809 Ensembl:ENSSSCT00000024590
            Uniprot:I3L961
        Length = 606

 Score = 157 (60.3 bits), Expect = 4.3e-08, P = 4.3e-08
 Identities = 51/204 (25%), Positives = 90/204 (44%)

Query:    79 TQHLFRQELTKYNLGEDCPVFE-NLFEFCQIYAGGT---IDA--ARRLNNQLCDIAINWA 132
             TQ L  +EL   +   D   F  + F   ++ AG     +DA  A  + N L    +   
Sbjct:    31 TQALSTEELQALSRQFDAVYFHPSTFHCARLAAGAALQLVDAVMAGVVRNGLA--LVRPP 88

Query:   133 GGLHHAKKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVM 190
             G  HH+++  A+GFC  N + +      + H   R+L +D D+HHG G +  F     V+
Sbjct:    89 G--HHSQRAAANGFCVFNSVAIAAKHAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVL 146

Query:   191 TVSFHKFGD-LFFP--GTGDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLF-KTIISKV 245
               S+H++    F+P     D   +G   G  + +N+P    G+ +  +   F + ++  +
Sbjct:   147 YFSWHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQVGMGNADYMPAFLQXVLLPL 206

Query:   246 VETYAPGAIVLQCGADSLAGDRLG 269
                +    +++  G DS  GD  G
Sbjct:   207 AFEFNAELVLVSAGFDSAIGDSEG 230


>UNIPROTKB|I3LKB5 [details] [associations]
            symbol:I3LKB5 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0016787 "hydrolase activity" evidence=IEA] Pfam:PF00850
            INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            GeneTree:ENSGT00530000062809 Ensembl:ENSSSCT00000030674
            Uniprot:I3LKB5
        Length = 621

 Score = 157 (60.3 bits), Expect = 4.5e-08, P = 4.5e-08
 Identities = 51/204 (25%), Positives = 90/204 (44%)

Query:    79 TQHLFRQELTKYNLGEDCPVFE-NLFEFCQIYAGGT---IDA--ARRLNNQLCDIAINWA 132
             TQ L  +EL   +   D   F  + F   ++ AG     +DA  A  + N L    +   
Sbjct:    45 TQALSTEELQALSRQFDAVYFHPSTFHCARLAAGAALQLVDAVMAGVVRNGLA--LVRPP 102

Query:   133 GGLHHAKKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVM 190
             G  HH+++  A+GFC  N + +      + H   R+L +D D+HHG G +  F     V+
Sbjct:   103 G--HHSQRAAANGFCVFNSVAIAAKHAQQKHGLHRILIVDWDIHHGQGTQYIFEDDPSVL 160

Query:   191 TVSFHKFGD-LFFP--GTGDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLF-KTIISKV 245
               S+H++    F+P     D   +G   G  + +N+P    G+ +  +   F + ++  +
Sbjct:   161 YFSWHRYEHGRFWPYLRESDADTVGRGRGLGFTVNLPWNQVGMGNADYMPAFLQXVLLPL 220

Query:   246 VETYAPGAIVLQCGADSLAGDRLG 269
                +    +++  G DS  GD  G
Sbjct:   221 AFEFNAELVLVSAGFDSAIGDSEG 244


>UNIPROTKB|E1BQQ2 [details] [associations]
            symbol:Gga.27678 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0016787 "hydrolase activity" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270
            GeneTree:ENSGT00530000062809 EMBL:AADN02010459 IPI:IPI00810964
            Ensembl:ENSGALT00000039176 OMA:FITIRND Uniprot:E1BQQ2
        Length = 218

 Score = 145 (56.1 bits), Expect = 4.6e-08, P = 4.6e-08
 Identities = 43/175 (24%), Positives = 83/175 (47%)

Query:    28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQEL 87
             P RL  ++  +  Y L ++       +    E+   HS++++E        TQ +  +EL
Sbjct:    30 PERLSASYEQLQCYHLVERCVPVPAREGSEEEILLVHSSEHLE----AAKSTQTMNEEEL 85

Query:    88 TKYNLGEDCPVFE-NLFEFCQIYAGGTIDAARR-LNNQLCD-IAINWAGGLHHAKKCEAS 144
              + +   D   F  N +   ++  G  +      ++ ++C+ +A+    G HH+++  A+
Sbjct:    86 KRISGNYDSFFFHPNTYHCARLAVGAALQLVDSVMSGKVCNGMALVRPPG-HHSQRNAAN 144

Query:   145 GFCYINDLVLGI-LELLKYHA-RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKF 197
             GFC  N++ +      LKY   R+L +D DVHHG G +  F     V+  S+H++
Sbjct:   145 GFCLFNNVAIAAEYAKLKYGLQRILIVDWDVHHGQGTQYIFEEDPSVLYFSWHRY 199


>UNIPROTKB|B5MCQ6 [details] [associations]
            symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
            sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 EMBL:AC027124 HGNC:HGNC:19086
            HOGENOM:HOG000280018 HOVERGEN:HBG051893 IPI:IPI00877858
            ProteinModelPortal:B5MCQ6 STRING:B5MCQ6 Ensembl:ENST00000402271
            ArrayExpress:B5MCQ6 Bgee:B5MCQ6 Uniprot:B5MCQ6
        Length = 268

 Score = 148 (57.2 bits), Expect = 7.0e-08, P = 7.0e-08
 Identities = 47/159 (29%), Positives = 74/159 (46%)

Query:   148 YINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGD 207
             Y+N+L   + E ++  +R   ID+D H G+G E  F    RV  +    +    +PG   
Sbjct:    79 YLNELKF-LFERVEGISRATIIDLDAHQGNGHERDFMDDKRVYIMDV--YNRHIYPGDRF 135

Query:   208 VKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR 267
              K+   R+       V L+ G +D  +    +  I K ++ + P  +V   G D L GDR
Sbjct:   136 AKQAIRRK-------VELEWGTEDDEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDR 188

Query:   268 LGCFNLSIDG---HAECV-RFVKKFNLPLLVTGGGGYTK 302
             LG  ++S  G     E V R V+   +P+L+   GGY K
Sbjct:   189 LGGLSISPAGIVKRDELVFRMVRGRRVPILMVTSGGYQK 227


>DICTYBASE|DDB_G0279267 [details] [associations]
            symbol:hdaD "type-2 histone deacetylase"
            species:44689 "Dictyostelium discoideum" [GO:0097372 "NAD-dependent
            histone deacetylase activity (H3-K18 specific)" evidence=IEA]
            [GO:0070933 "histone H4 deacetylation" evidence=IEA] [GO:0070932
            "histone H3 deacetylation" evidence=IEA] [GO:0046970 "NAD-dependent
            histone deacetylase activity (H4-K16 specific)" evidence=IEA]
            [GO:0046969 "NAD-dependent histone deacetylase activity (H3-K9
            specific)" evidence=IEA] [GO:0034739 "histone deacetylase activity
            (H4-K16 specific)" evidence=IEA] [GO:0032129 "histone deacetylase
            activity (H3-K9 specific)" evidence=IEA] [GO:0032041 "NAD-dependent
            histone deacetylase activity (H3-K14 specific)" evidence=IEA]
            [GO:0031078 "histone deacetylase activity (H3-K14 specific)"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0016568 "chromatin modification" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] dictyBase:DDB_G0279267 Pfam:PF00850 GO:GO:0005634
            GO:GO:0005737 GO:GO:0006355 GenomeReviews:CM000152_GR GO:GO:0006351
            EMBL:AAFI02000030 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
            GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            Gene3D:3.40.800.20 InterPro:IPR023801 RefSeq:XP_641762.1
            ProteinModelPortal:Q54X15 EnsemblProtists:DDB0237655 GeneID:8621960
            KEGG:ddi:DDB_G0279267 OMA:ELILISC Uniprot:Q54X15
        Length = 1489

 Score = 123 (48.4 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
 Identities = 28/73 (38%), Positives = 40/73 (54%)

Query:   143 ASGFCYINDLVLGI-LELLKYHA-RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDL 200
             + GFC +N + +G     LKY+  ++  ID DVHHG+G EE          +S H F + 
Sbjct:  1244 SQGFCLLNHVCIGAKYAQLKYNLDKIAIIDFDVHHGNGTEEILSNDQGFYFLSIHMFEEG 1303

Query:   201 FFPGTGD-VKEIG 212
             F+PG+G  V  IG
Sbjct:  1304 FYPGSGGGVGSIG 1316

 Score = 87 (35.7 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
 Identities = 20/67 (29%), Positives = 34/67 (50%)

Query:   221 INVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAE 280
             +N+PL      +SF + F  II K+ + Y P  I++ CG D+   D L    L  + + E
Sbjct:  1386 VNIPLDPKSSASSFLKAFSIIIDKLND-YQPELILISCGFDAHMEDHLASLCLLEENYVE 1444

Query:   281 CVRFVKK 287
               R +++
Sbjct:  1445 ITRSLRR 1451


>UNIPROTKB|E7EUZ1 [details] [associations]
            symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
            sapiens" [GO:0016787 "hydrolase activity" evidence=IEA]
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0016787 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AF196971
            HGNC:HGNC:14064 ChiTaRS:HDAC6 IPI:IPI00909242
            ProteinModelPortal:E7EUZ1 SMR:E7EUZ1 Ensembl:ENST00000413163
            UCSC:uc011mmj.1 ArrayExpress:E7EUZ1 Bgee:E7EUZ1 Uniprot:E7EUZ1
        Length = 296

 Score = 141 (54.7 bits), Expect = 6.2e-07, P = 6.2e-07
 Identities = 59/233 (25%), Positives = 98/233 (42%)

Query:    25 PMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFR 84
             P  P RL      ++   L  +   ++   A   EL   HS +Y++ +      TQ++  
Sbjct:    51 PEGPERLHAIKEQLIQEGLLDRCVSFQARFAEKEELMLVHSLEYIDLMET----TQYMNE 106

Query:    85 QELTKY-NLGEDCPVFENLFEFCQIYAGGTI----DAARRLNNQLCD-IAINWAGGLHHA 138
              EL    +  +   +  N +  C   A G++    DA   L  ++ + +AI    G HHA
Sbjct:   107 GELRVLADTYDSVYLHPNSYS-CACLASGSVLRLVDAV--LGAEIRNGMAIIRPPG-HHA 162

Query:   139 KKCEASGFCYINDLVLGILELLKYHA--RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHK 196
             +     G+C  N + +      + H   RVL +D DVHHG G +  F     V+  S H+
Sbjct:   163 QHSLMDGYCMFNHVAVAARYAQQKHRIRRVLIVDWDVHHGQGTQFTFDQDPSVLYFSIHR 222

Query:   197 FGD-LFFPG--TGDVKEIGEREGKFYAINVPLKD-GIDDTSFTRLFKTIISKV 245
             +    F+P     +    G  +G+ Y INVP    G+ D  +   F  ++  V
Sbjct:   223 YEQGRFWPHLKASNWSTTGFGQGQGYTINVPWNQVGMRDADYIAAFLHVLLPV 275


>UNIPROTKB|Q484X2 [details] [associations]
            symbol:CPS_1655 "Histone deacetylase family protein"
            species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
            "biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
            EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0123
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_268393.1
            ProteinModelPortal:Q484X2 STRING:Q484X2 GeneID:3521008
            KEGG:cps:CPS_1655 PATRIC:21466495 OMA:HIEDEMS
            ProtClustDB:CLSK768159 BioCyc:CPSY167879:GI48-1732-MONOMER
            Uniprot:Q484X2
        Length = 317

 Score = 123 (48.4 bits), Expect = 8.0e-05, P = 8.0e-05
 Identities = 45/173 (26%), Positives = 73/173 (42%)

Query:    16 GSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVE---LAQFHSADYVEFL 72
             G    G +HP    RL      ++   L     + R   + P++   LA  H+ ++++F+
Sbjct:    12 GEHNMGEHHPENGKRLTAISDQLIRSGLDY---VVRQFDSKPIDKSLLALAHTQEHIDFV 68

Query:    73 HRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAI--N 130
                 P+      +E   + +GED  + E         AG  +DA   +       A    
Sbjct:    69 FDNAPNEG----EE--NFTVGEDSVMNEKTLTSIMYSAGAAVDAVDLVMEGTLGAAFCAT 122

Query:   131 WAGGLHHAKKCEASGFCYINDL-VLGILELLKYHA-RVLYIDIDVHHGDGVEE 181
                G HHA+  +  GFC+ N++ V       KY   RV  +D DVHHG+G E+
Sbjct:   123 RPPG-HHAEHDKGMGFCFFNNVAVAAAYAKQKYGLKRVAIVDFDVHHGNGTED 174


>TIGR_CMR|CPS_1655 [details] [associations]
            symbol:CPS_1655 "histone deacetylase family protein"
            species:167879 "Colwellia psychrerythraea 34H" [GO:0004407 "histone
            deacetylase activity" evidence=ISS] [GO:0008150
            "biological_process" evidence=ND] Pfam:PF00850 INTERPRO:IPR000286
            EMBL:CP000083 GenomeReviews:CP000083_GR eggNOG:COG0123
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 HOGENOM:HOG000225183 RefSeq:YP_268393.1
            ProteinModelPortal:Q484X2 STRING:Q484X2 GeneID:3521008
            KEGG:cps:CPS_1655 PATRIC:21466495 OMA:HIEDEMS
            ProtClustDB:CLSK768159 BioCyc:CPSY167879:GI48-1732-MONOMER
            Uniprot:Q484X2
        Length = 317

 Score = 123 (48.4 bits), Expect = 8.0e-05, P = 8.0e-05
 Identities = 45/173 (26%), Positives = 73/173 (42%)

Query:    16 GSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVE---LAQFHSADYVEFL 72
             G    G +HP    RL      ++   L     + R   + P++   LA  H+ ++++F+
Sbjct:    12 GEHNMGEHHPENGKRLTAISDQLIRSGLDY---VVRQFDSKPIDKSLLALAHTQEHIDFV 68

Query:    73 HRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAI--N 130
                 P+      +E   + +GED  + E         AG  +DA   +       A    
Sbjct:    69 FDNAPNEG----EE--NFTVGEDSVMNEKTLTSIMYSAGAAVDAVDLVMEGTLGAAFCAT 122

Query:   131 WAGGLHHAKKCEASGFCYINDL-VLGILELLKYHA-RVLYIDIDVHHGDGVEE 181
                G HHA+  +  GFC+ N++ V       KY   RV  +D DVHHG+G E+
Sbjct:   123 RPPG-HHAEHDKGMGFCFFNNVAVAAAYAKQKYGLKRVAIVDFDVHHGNGTED 174


>UNIPROTKB|B5MCV5 [details] [associations]
            symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
            sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
            evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
            GO:GO:0016787 GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AC027124 HGNC:HGNC:19086
            HOGENOM:HOG000280018 HOVERGEN:HBG051893 IPI:IPI00879737
            ProteinModelPortal:B5MCV5 SMR:B5MCV5 STRING:B5MCV5
            Ensembl:ENST00000405478 BindingDB:B5MCV5 ArrayExpress:B5MCV5
            Bgee:B5MCV5 Uniprot:B5MCV5
        Length = 204

 Score = 113 (44.8 bits), Expect = 0.00032, P = 0.00032
 Identities = 34/108 (31%), Positives = 47/108 (43%)

Query:   111 GGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGI---LELLKYHARVL 167
             GGTI A +    +    AIN  GG HH       GFC   D+ L I    E ++  +R  
Sbjct:    91 GGTIMAGKLAVER--GWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRAT 148

Query:   168 YIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGERE 215
              ID+D H G+G E  F    RV  +    +    +PG    K+   R+
Sbjct:   149 IIDLDAHQGNGHERDFMDDKRVYIMDV--YNRHIYPGDRFAKQAIRRK 194


>UNIPROTKB|F5H6R5 [details] [associations]
            symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
            sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
            evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
            GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 EMBL:AC027124 HGNC:HGNC:19086 IPI:IPI00790809
            ProteinModelPortal:F5H6R5 SMR:F5H6R5 Ensembl:ENST00000446613
            UCSC:uc011aux.2 ArrayExpress:F5H6R5 Bgee:F5H6R5 Uniprot:F5H6R5
        Length = 155

 Score = 105 (42.0 bits), Expect = 0.00057, P = 0.00057
 Identities = 33/97 (34%), Positives = 48/97 (49%)

Query:   212 GEREGKFYAIN--VPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLG 269
             G+R  K  AI   V L+ G +D  +    +  I K ++ + P  +V   G D L GDRLG
Sbjct:    19 GDRFAK-QAIRRKVELEWGTEDDEYLDKVERNIKKSLQEHLPDVVVYNAGTDILEGDRLG 77

Query:   270 CFNLSIDG---HAECV-RFVKKFNLPLLVTGGGGYTK 302
               ++S  G     E V R V+   +P+L+   GGY K
Sbjct:    78 GLSISPAGIVKRDELVFRMVRGRRVPILMVTSGGYQK 114


>UNIPROTKB|C9JEC8 [details] [associations]
            symbol:HDAC11 "Histone deacetylase 11" species:9606 "Homo
            sapiens" [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0014003 "oligodendrocyte development"
            evidence=IEA] Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634
            GO:GO:0016787 GO:GO:0014003 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 EMBL:AC027124 HGNC:HGNC:19086
            HOGENOM:HOG000280018 IPI:IPI00879107 ProteinModelPortal:C9JEC8
            SMR:C9JEC8 STRING:C9JEC8 Ensembl:ENST00000455904 BindingDB:C9JEC8
            ArrayExpress:C9JEC8 Bgee:C9JEC8 Uniprot:C9JEC8
        Length = 166

 Score = 107 (42.7 bits), Expect = 0.00057, P = 0.00057
 Identities = 28/76 (36%), Positives = 36/76 (47%)

Query:   111 GGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGI---LELLKYHARVL 167
             GGTI A +    +    AIN  GG HH       GFC   D+ L I    E ++  +R  
Sbjct:    91 GGTIMAGKLAVER--GWAINVGGGFHHCSSDRGGGFCAYADITLAIKFLFERVEGISRAT 148

Query:   168 YIDIDVHHGDGVEEAF 183
              ID+D H G+G E  F
Sbjct:   149 IIDLDAHQGNGHERDF 164


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.322   0.141   0.437    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      429       429   0.00085  118 3  11 22  0.38    34
                                                     34  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  230
  No. of states in DFA:  608 (65 KB)
  Total size of DFA:  294 KB (2152 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  37.04u 0.17s 37.21t   Elapsed:  00:00:02
  Total cpu time:  37.08u 0.17s 37.25t   Elapsed:  00:00:02
  Start:  Fri May 10 03:46:27 2013   End:  Fri May 10 03:46:29 2013
WARNINGS ISSUED:  1
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with HDA9 HDA9 HDA9 AT3G44680	protein from Arabidopsis thaliana	4.2e-214
BLAST match view associations BLAST with HDAC1 HDAC1 HDAC1 Histone deacetylase 1	protein from Bos taurus	6.5e-151
BLAST match view associations BLAST with Hdac1 Hdac1 Hdac1 histone deacetylase 1	protein from Mus musculus	8.3e-151
BLAST match view associations BLAST with Hdac1l Hdac1l Hdac1l histone deacetylase 1-like	gene from Rattus norvegicus	8.3e-151
BLAST match view associations BLAST with HDAC1 HDAC1 HDAC1 Histone deacetylase 1	protein from Homo sapiens	7.4e-150
BLAST match view associations BLAST with HDAC1 HDAC1 HDAC1 Uncharacterized protein	protein from Canis lupus familiaris	7.4e-150
BLAST match view associations BLAST with HDAC1 HDAC1 HDAC1 Histone deacetylase	protein from Canis lupus familiaris	7.4e-150
BLAST match view associations BLAST with HDAC1 HDAC1 HDAC1 Histone deacetylase	protein from Canis lupus familiaris	7.4e-150
BLAST match view associations BLAST with HDAC1 HDAC1 HDAC1 Histone deacetylase 1	protein from Gallus gallus	3.8e-149
BLAST match view associations BLAST with LOC100622482 LOC100622482 LOC100622482 Histone deacetylase	protein from Sus scrofa	1.2e-147
BLAST match view associations BLAST with HDAC1 HDAC1 HDAC1 Histone deacetylase 1	protein from Strongylocentrotus purpuratus	6.4e-147
BLAST match view associations BLAST with hdac1 hdac1 hdac1 histone deacetylase 1	gene_product from Danio rerio	8.1e-147
BLAST match view associations BLAST with hdaA hdaA hdaA type-1 histone deacetylase	gene from Dictyostelium discoideum	1.3e-146
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase	protein from Gallus gallus	2.8e-146
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase 2	protein from Homo sapiens	2.8e-146
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase 2	protein from Homo sapiens	2.8e-146
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase	protein from Sus scrofa	2.8e-146
BLAST match view associations BLAST with Hdac2 Hdac2 Hdac2 histone deacetylase 2	protein from Mus musculus	7.3e-146
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase	protein from Canis lupus familiaris	1.2e-143
BLAST match view associations BLAST with Rpd3 Rpd3 Rpd3	protein from Drosophila melanogaster	3.3e-143
BLAST match view associations BLAST with HDAC3 HDAC3 HDAC3 Histone deacetylase 3	protein from Gallus gallus	7.8e-142
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase 2	protein from Gallus gallus	1.3e-141
BLAST match view associations BLAST with HDAC3 HDAC3 HDAC3 Histone deacetylase	protein from Gallus gallus	2.6e-141
BLAST match view associations BLAST with Hdac3 Hdac3 Hdac3 histone deacetylase 3	protein from Mus musculus	4.9e-140
BLAST match view associations BLAST with Hdac3 Hdac3 Hdac3 histone deacetylase 3	gene from Rattus norvegicus	4.9e-140
BLAST match view associations BLAST with Hdac3 Hdac3 Hdac3 Histone deacetylase 3	protein from Rattus norvegicus	4.9e-140
BLAST match view associations BLAST with hdaB hdaB hdaB type-1 histone deacetylase	gene from Dictyostelium discoideum	8.0e-140
BLAST match view associations BLAST with HDAC3 HDAC3 HDAC3 Histone deacetylase	protein from Canis lupus familiaris	1.0e-139
BLAST match view associations BLAST with HDAC3 HDAC3 HDAC3 Histone deacetylase 3	protein from Homo sapiens	1.0e-139
BLAST match view associations BLAST with HDAC3 HDAC3 HDAC3 Histone deacetylase	protein from Sus scrofa	1.0e-139
BLAST match view associations BLAST with HD1 HD1 HD1 AT4G38130	protein from Arabidopsis thaliana	3.5e-139
BLAST match view associations BLAST with hdac3 hdac3 hdac3 histone deacetylase 3	gene_product from Danio rerio	2.4e-138
BLAST match view associations BLAST with Hdac3 Hdac3 Hdac3 Histone deacetylase 3	protein from Drosophila melanogaster	4.0e-138
BLAST match view associations BLAST with RPD31 RPD31 RPD31	gene_product from Candida albicans	2.8e-137
BLAST match view associations BLAST with RPD31 RPD31 RPD31 Potential Sin3.Rpd3 histone deacetylase complex component Rpd3p	protein from Candida albicans SC5314	2.8e-137
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase	protein from Canis lupus familiaris	2.8e-137
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase	protein from Homo sapiens	2.8e-137
BLAST match view associations BLAST with hda-1 hda-1 hda-1	gene from Caenorhabditis elegans	3.7e-135
BLAST match view associations BLAST with hda-1 hda-1 hda-1 Histone deacetylase 1	protein from Caenorhabditis elegans	3.7e-135
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase	protein from Bos taurus	5.4e-134
BLAST match view associations BLAST with RPD3 RPD3 RPD3 Histone deacetylase	gene from Saccharomyces cerevisiae	3.9e-131
BLAST match view associations BLAST with RPD3 RPD3 RPD3	gene_product from Candida albicans	5.0e-131
BLAST match view associations BLAST with RPD3 RPD3 RPD3 Histone deacetylase	protein from Candida albicans SC5314	5.0e-131
BLAST match view associations BLAST with hda-3 hda-3 hda-3	gene from Caenorhabditis elegans	1.7e-130
BLAST match view associations BLAST with HDA6 HDA6 HDA6 AT5G63110	protein from Arabidopsis thaliana	6.6e-129
BLAST match view associations BLAST with F1M4V8 F1M4V8 F1M4V8 Histone deacetylase	protein from Rattus norvegicus	4.3e-125
BLAST match view associations BLAST with LOC100521667 LOC100521667 LOC100521667 Histone deacetylase	protein from Sus scrofa	6.6e-121
BLAST match view associations BLAST with HOS2 HOS2 HOS2	gene_product from Candida albicans	1.4e-119
BLAST match view associations BLAST with HOS2 HOS2 HOS2 Histone deacetylase	protein from Candida albicans SC5314	1.4e-119
BLAST match view associations BLAST with HOS2 HOS2 HOS2 Histone deacetylase and subunit of Set3 and Rpd3L complexes	gene from Saccharomyces cerevisiae	1.0e-116
BLAST match view associations BLAST with hda-2 hda-2 hda-2	gene from Caenorhabditis elegans	3.5e-107
BLAST match view associations BLAST with HDA7 HDA7 HDA7 AT5G35600	protein from Arabidopsis thaliana	8.3e-106
BLAST match view associations BLAST with HDAC3 HDAC3 HDAC3 Histone deacetylase 3	protein from Homo sapiens	4.4e-86
BLAST match view associations BLAST with hdac8 hdac8 hdac8 histone deacetylase 8	gene_product from Danio rerio	1.2e-80
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase 8	protein from Homo sapiens	4.7e-80
BLAST match view associations BLAST with Hdac8 Hdac8 Hdac8 histone deacetylase 8	protein from Mus musculus	7.6e-80
BLAST match view associations BLAST with Hdac8 Hdac8 Hdac8 histone deacetylase 8	gene from Rattus norvegicus	7.6e-80
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase	protein from Bos taurus	2.0e-79
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase	protein from Canis lupus familiaris	2.6e-79
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase	protein from Gallus gallus	1.4e-78
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase 8	protein from Bos taurus	1.8e-78
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase	protein from Canis lupus familiaris	4.3e-77
BLAST match view associations BLAST with HDAC1 HDAC1 HDAC1 Histone deacetylase 1	protein from Homo sapiens	4.6e-73
BLAST match view associations BLAST with hda17 hda17 hda17 histone deacetylase 17	protein from Arabidopsis thaliana	4.3e-70
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase 8	protein from Homo sapiens	3.7e-64
BLAST match view associations BLAST with hda10 hda10 hda10 histone deacetylase 10	protein from Arabidopsis thaliana	9.3e-59
BLAST match view associations BLAST with Hdac1 Hdac1 Hdac1 histone deacetylase 1	gene from Rattus norvegicus	1.2e-58
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase 8	protein from Homo sapiens	2.9e-58
BLAST match view associations BLAST with GSU1222 GSU1222 GSU1222 Histone deacetylase family protein	protein from Geobacter sulfurreducens PCA	1.4e-57
BLAST match view associations BLAST with GSU_1222 GSU_1222 GSU_1222 histone deacetylase/AcuC/AphA family protein	protein from Geobacter sulfurreducens PCA	1.4e-57
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase 8	protein from Homo sapiens	3.7e-55
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Uncharacterized protein	protein from Sus scrofa	6.1e-55
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase 2	protein from Homo sapiens	1.3e-54
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase 8	protein from Homo sapiens	3.4e-54
BLAST match view associations BLAST with HDAC1 HDAC1 HDAC1 Histone deacetylase 1	protein from Homo sapiens	6.0e-48
BLAST match view associations BLAST with HOS1 HOS1 HOS1 Class I histone deacetylase (HDAC) family member	gene from Saccharomyces cerevisiae	2.0e-47
BLAST match view associations BLAST with HOS1 HOS1 HOS1	gene_product from Candida albicans	3.3e-47
BLAST match view associations BLAST with HOS1 HOS1 HOS1 Likely histone deacetylase Hos1p	protein from Candida albicans SC5314	3.3e-47
BLAST match view associations BLAST with acuC acuC acuC Acetoin utilization protein AcuC	protein from Carboxydothermus hydrogenoformans Z-2901	3.6e-41
BLAST match view associations BLAST with CHY_0174 CHY_0174 CHY_0174 acetoin utilization protein AcuC	protein from Carboxydothermus hydrogenoformans Z-2901	3.6e-41
BLAST match view associations BLAST with acuC acuC acuC Acetoin utilization protein AcuC	protein from Bacillus anthracis	2.0e-40
BLAST match view associations BLAST with BA_4918 BA_4918 BA_4918 acetoin utilization protein AcuC	protein from Bacillus anthracis str. Ames	2.0e-40
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase 8	protein from Homo sapiens	7.2e-36
BLAST match view associations BLAST with SPO_2177 SPO_2177 SPO_2177 acetoin utilization protein AcuC	protein from Ruegeria pomeroyi DSS-3	1.9e-35
BLAST match view associations BLAST with HDAC3 HDAC3 HDAC3 Histone deacetylase 3	protein from Homo sapiens	4.1e-35
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase 8	protein from Homo sapiens	1.3e-34
BLAST match view associations BLAST with HDAC3 HDAC3 HDAC3 Uncharacterized protein	protein from Bos taurus	1.5e-33
BLAST match view associations BLAST with LOC100625846 LOC100625846 LOC100625846 Uncharacterized protein	protein from Sus scrofa	6.0e-32
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase 2	protein from Homo sapiens	3.1e-28
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase 2	protein from Homo sapiens	2.2e-27
BLAST match view associations BLAST with HDAC8 HDAC8 HDAC8 Histone deacetylase 8	protein from Homo sapiens	2.8e-27
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase 2	protein from Homo sapiens	8.4e-26
BLAST match view associations BLAST with HDA1 HDA1 HDA1	gene_product from Candida albicans	1.0e-25
BLAST match view associations BLAST with HDA1 HDA1 HDA1 Likely class II histone deacetylase subunit Hda1p	protein from Candida albicans SC5314	1.0e-25
BLAST match view associations BLAST with HDAC2 HDAC2 HDAC2 Histone deacetylase 2	protein from Homo sapiens	1.8e-24