BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014167
(429 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8H0W2|HDA9_ARATH Histone deacetylase 9 OS=Arabidopsis thaliana GN=HDA9 PE=2 SV=1
Length = 426
Score = 796 bits (2055), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 372/424 (87%), Positives = 403/424 (95%)
Query: 1 MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVEL 60
MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHL+L+Y LH KME+YRPHKAYP+E+
Sbjct: 1 MRSKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLILAYGLHSKMEVYRPHKAYPIEM 60
Query: 61 AQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL 120
AQFHS DYVEFL RI P+ Q+LF E+ +YNLGEDCPVFE+LFEFCQ+YAGGTIDAARRL
Sbjct: 61 AQFHSPDYVEFLQRINPENQNLFPNEMARYNLGEDCPVFEDLFEFCQLYAGGTIDAARRL 120
Query: 121 NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE 180
NN+LCDIAINWAGGLHHAKKC+ASGFCYINDLVLGILELLK+H RVLYIDIDVHHGDGVE
Sbjct: 121 NNKLCDIAINWAGGLHHAKKCDASGFCYINDLVLGILELLKHHPRVLYIDIDVHHGDGVE 180
Query: 181 EAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKT 240
EAFYFTDRVMTVSFHKFGD FFPGTGDVKEIGEREGKFYAINVPLKDGIDD+SF RLF+T
Sbjct: 181 EAFYFTDRVMTVSFHKFGDKFFPGTGDVKEIGEREGKFYAINVPLKDGIDDSSFNRLFRT 240
Query: 241 IISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGY 300
IISKVVE Y PGAIVLQCGADSLA DRLGCFNLSIDGHAECV+FVKKFNLPLLVTGGGGY
Sbjct: 241 IISKVVEIYQPGAIVLQCGADSLARDRLGCFNLSIDGHAECVKFVKKFNLPLLVTGGGGY 300
Query: 301 TKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIK 360
TKENVARCWTVETGILLDTELPNEIPEN+YIKYFAP+ SL+IP GHIENLN+KSY+S+IK
Sbjct: 301 TKENVARCWTVETGILLDTELPNEIPENDYIKYFAPDFSLKIPGGHIENLNTKSYISSIK 360
Query: 361 MQVLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGD 420
+Q+LENLR IQHAPSVQMQEVPPDFYIP+FDEDEQNPD R DQ ++DKQIQRDDE+++GD
Sbjct: 361 VQILENLRYIQHAPSVQMQEVPPDFYIPDFDEDEQNPDVRADQRSRDKQIQRDDEYFDGD 420
Query: 421 NDND 424
NDND
Sbjct: 421 NDND 424
>sp|P56517|HDAC1_CHICK Histone deacetylase 1 OS=Gallus gallus GN=HDAC1 PE=2 SV=1
Length = 480
Score = 546 bits (1408), Expect = e-155, Method: Compositional matrix adjust.
Identities = 252/423 (59%), Positives = 333/423 (78%), Gaps = 2/423 (0%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
+K K+ Y+YDGDVG+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA E+ +
Sbjct: 7 TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
+HS DY++FL I PD + +++ ++N+GEDCPVF+ LFEFCQ+ AGG++ +A +LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNK 126
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
Q DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
FY TDRVMTVSFHK+G+ +FPGTGD+++IG +GK+YA+N PL+DGIDD S+ +FK +I
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVI 245
Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
SKV+ET+ P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT
Sbjct: 246 SKVMETFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305
Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQ 362
NVARCWT ET + LDTE+PNE+P N+Y +YF P+ L I ++ N N+ YL IK +
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQR 365
Query: 363 VLENLRSIQHAPSVQMQEVPPD-FYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDN 421
+ ENLR + HAP VQMQ +P D DE+E++P++R+ DK+I D+EF + ++
Sbjct: 366 LFENLRMLPHAPGVQMQPIPEDAVQEDSGDEEEEDPEKRISIRNSDKRISCDEEFSDSED 425
Query: 422 DND 424
+ +
Sbjct: 426 EGE 428
>sp|O42227|HDA1B_XENLA Probable histone deacetylase 1-B OS=Xenopus laevis GN=hdac1-b PE=1
SV=1
Length = 480
Score = 538 bits (1386), Expect = e-152, Method: Compositional matrix adjust.
Identities = 244/423 (57%), Positives = 333/423 (78%), Gaps = 2/423 (0%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
+K K+ Y+YDGDVG+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA E+ +
Sbjct: 7 TKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKASAEEMTK 66
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
+HS DY++FL I PD + +++ ++N+GEDCPVF+ LFEFCQ+ GG++ +A +LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
Q DI++NW+GGLHHAKK EASGFCY+ND+VL ILELLKYH RV+YIDID+HHGDGVEEA
Sbjct: 127 QQTDISVNWSGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVVYIDIDIHHGDGVEEA 186
Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
FY TDRVM+VSFHK+G+ +FPGTGD+++IG +GK+YA+N PL+DGIDD S+ +FK ++
Sbjct: 187 FYTTDRVMSVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245
Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
+KV+E + P A+VLQCGADSL+GDRLGCFNL+I GHA+CV F+K FNLP+L+ GGGGYT
Sbjct: 246 TKVMEMFQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEFIKTFNLPMLMLGGGGYTI 305
Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQ 362
NVARCWT ET + LD+E+PNE+P N+Y +YF P+ L I ++ N N+ YL IK +
Sbjct: 306 RNVARCWTYETAVALDSEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQR 365
Query: 363 VLENLRSIQHAPSVQMQEVPPD-FYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDN 421
+ ENLR + HAP VQMQ +P D + +EDE++PD+R+ + DK+I D+EF + ++
Sbjct: 366 LFENLRMLPHAPGVQMQAIPEDSVHDDSGEEDEEDPDKRISIRSSDKRIACDEEFSDSED 425
Query: 422 DND 424
+ +
Sbjct: 426 EGE 428
>sp|Q4QQW4|HDAC1_RAT Histone deacetylase 1 OS=Rattus norvegicus GN=Hdac1 PE=2 SV=1
Length = 482
Score = 538 bits (1385), Expect = e-152, Method: Compositional matrix adjust.
Identities = 238/382 (62%), Positives = 307/382 (80%), Gaps = 1/382 (0%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
+K K+ Y+YDGDVG+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA E+ +
Sbjct: 7 TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
+HS DY++FL I PD + +++ ++N+GEDCPVF+ LFEFCQ+ GG++ +A +LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
Q DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
FY TDRVMTVSFHK+G+ +FPGTGD+++IG +GK+YA+N PL+DGIDD S+ +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245
Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305
Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQ 362
NVARCWT ET + LDTE+PNE+P N+Y +YF P+ L I ++ N N+ YL IK +
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQR 365
Query: 363 VLENLRSIQHAPSVQMQEVPPD 384
+ ENLR + HAP VQMQ +P D
Sbjct: 366 LFENLRMLPHAPGVQMQAIPED 387
>sp|O09106|HDAC1_MOUSE Histone deacetylase 1 OS=Mus musculus GN=Hdac1 PE=1 SV=1
Length = 482
Score = 538 bits (1385), Expect = e-152, Method: Compositional matrix adjust.
Identities = 238/382 (62%), Positives = 307/382 (80%), Gaps = 1/382 (0%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
+K K+ Y+YDGDVG+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA E+ +
Sbjct: 7 TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
+HS DY++FL I PD + +++ ++N+GEDCPVF+ LFEFCQ+ GG++ +A +LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
Q DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
FY TDRVMTVSFHK+G+ +FPGTGD+++IG +GK+YA+N PL+DGIDD S+ +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245
Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305
Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQ 362
NVARCWT ET + LDTE+PNE+P N+Y +YF P+ L I ++ N N+ YL IK +
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQR 365
Query: 363 VLENLRSIQHAPSVQMQEVPPD 384
+ ENLR + HAP VQMQ +P D
Sbjct: 366 LFENLRMLPHAPGVQMQAIPED 387
>sp|Q32PJ8|HDAC1_BOVIN Histone deacetylase 1 OS=Bos taurus GN=HDAC1 PE=2 SV=1
Length = 482
Score = 538 bits (1385), Expect = e-152, Method: Compositional matrix adjust.
Identities = 238/382 (62%), Positives = 307/382 (80%), Gaps = 1/382 (0%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
+K K+ Y+YDGDVG+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA E+ +
Sbjct: 7 TKRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
+HS DY++FL I PD + +++ ++N+GEDCPVF+ LFEFCQ+ GG++ +A +LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
Q DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
FY TDRVMTVSFHK+G+ +FPGTGD+++IG +GK+YA+N PL+DGIDD S+ +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245
Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305
Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQ 362
NVARCWT ET + LDTE+PNE+P N+Y +YF P+ L I ++ N N+ YL IK +
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQR 365
Query: 363 VLENLRSIQHAPSVQMQEVPPD 384
+ ENLR + HAP VQMQ +P D
Sbjct: 366 LFENLRMLPHAPGVQMQAIPED 387
>sp|Q5RAG0|HDAC1_PONAB Histone deacetylase 1 OS=Pongo abelii GN=HDAC1 PE=2 SV=1
Length = 482
Score = 537 bits (1383), Expect = e-152, Method: Compositional matrix adjust.
Identities = 237/382 (62%), Positives = 307/382 (80%), Gaps = 1/382 (0%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
++ K+ Y+YDGDVG+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA E+ +
Sbjct: 7 TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
+HS DY++FL I PD + +++ ++N+GEDCPVF+ LFEFCQ+ GG++ +A +LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
Q DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
FY TDRVMTVSFHK+G+ +FPGTGD+++IG +GK+YA+N PL+DGIDD S+ +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245
Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305
Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQ 362
NVARCWT ET + LDTE+PNE+P N+Y +YF P+ L I ++ N N+ YL IK +
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQR 365
Query: 363 VLENLRSIQHAPSVQMQEVPPD 384
+ ENLR + HAP VQMQ +P D
Sbjct: 366 LFENLRMLPHAPGVQMQAIPED 387
>sp|Q13547|HDAC1_HUMAN Histone deacetylase 1 OS=Homo sapiens GN=HDAC1 PE=1 SV=1
Length = 482
Score = 537 bits (1383), Expect = e-152, Method: Compositional matrix adjust.
Identities = 237/382 (62%), Positives = 307/382 (80%), Gaps = 1/382 (0%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
++ K+ Y+YDGDVG+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA E+ +
Sbjct: 7 TRRKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKANAEEMTK 66
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
+HS DY++FL I PD + +++ ++N+GEDCPVF+ LFEFCQ+ GG++ +A +LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVASAVKLNK 126
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
Q DIA+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 127 QQTDIAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 186
Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
FY TDRVMTVSFHK+G+ +FPGTGD+++IG +GK+YA+N PL+DGIDD S+ +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPVM 245
Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
SKV+E + P A+VLQCG+DSL+GDRLGCFNL+I GHA+CV FVK FNLP+L+ GGGGYT
Sbjct: 246 SKVMEMFQPSAVVLQCGSDSLSGDRLGCFNLTIKGHAKCVEFVKSFNLPMLMLGGGGYTI 305
Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQ 362
NVARCWT ET + LDTE+PNE+P N+Y +YF P+ L I ++ N N+ YL IK +
Sbjct: 306 RNVARCWTYETAVALDTEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQR 365
Query: 363 VLENLRSIQHAPSVQMQEVPPD 384
+ ENLR + HAP VQMQ +P D
Sbjct: 366 LFENLRMLPHAPGVQMQAIPED 387
>sp|Q55FN5|HDA11_DICDI Type-1 histone deacetylase 1 OS=Dictyostelium discoideum GN=hdaA
PE=2 SV=1
Length = 495
Score = 536 bits (1380), Expect = e-151, Method: Compositional matrix adjust.
Identities = 247/421 (58%), Positives = 331/421 (78%), Gaps = 1/421 (0%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
S K+SYFYD +VG+ Y+GPNHPMKPHR+ MTH LVL+Y ++KKM+I+RP KA +EL
Sbjct: 2 STRKVSYFYDNEVGNHYYGPNHPMKPHRMRMTHDLVLNYGIYKKMQIFRPRKASELELTN 61
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
FHS DY+ FL +TPD H + ++L K+N+ EDCPVF+ ++ FCQI +GG+I A ++N+
Sbjct: 62 FHSDDYINFLKLVTPDNMHDYSKQLVKFNVREDCPVFDGMYNFCQISSGGSIGCAVKVNS 121
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
+ D+AINWAGGLHHAKK EASGFCY ND+VL ILELLK+H RVLYIDID+HHGDGVEEA
Sbjct: 122 KESDVAINWAGGLHHAKKSEASGFCYTNDIVLSILELLKHHERVLYIDIDIHHGDGVEEA 181
Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
FY TDRVMTVSFHK+GD +FPGTGDVK+IG +GK+Y++N PLKDGIDD S+ +F+ II
Sbjct: 182 FYTTDRVMTVSFHKYGD-YFPGTGDVKDIGADKGKYYSLNFPLKDGIDDESYQSIFRPII 240
Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
V++ Y PGA+V+QCGADSL GDRLGCFNL++ GHA+C+ F+K FN+PL+V GGGGYT
Sbjct: 241 RSVMDFYRPGAVVIQCGADSLTGDRLGCFNLTLRGHAQCIEFLKSFNVPLVVLGGGGYTI 300
Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQ 362
+NVARCWT ET IL+D+EL +E+P N+Y++Y+ PE L I ++EN N+K YL +K+Q
Sbjct: 301 KNVARCWTYETSILVDSELKDELPYNDYLEYYGPEYRLHITPNNMENQNTKDYLEKLKIQ 360
Query: 363 VLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDND 422
+LENLR++ HAP+ ++PPD + DED+++PD R+ + +DK++ E + D +
Sbjct: 361 LLENLRNLNHAPAAAHHDIPPDSFNYSDDEDDEDPDVRISEADRDKKVHHQGELSDSDEE 420
Query: 423 N 423
+
Sbjct: 421 D 421
>sp|P56518|HDAC1_STRPU Histone deacetylase 1 OS=Strongylocentrotus purpuratus GN=HDAC1
PE=2 SV=1
Length = 576
Score = 533 bits (1372), Expect = e-150, Method: Compositional matrix adjust.
Identities = 253/424 (59%), Positives = 331/424 (78%), Gaps = 3/424 (0%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
+K ++ Y+YDGDVG+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA E+ +
Sbjct: 6 TKKRVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLILNYGLYRKMEIYRPHKAVMEEMTK 65
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
+HS DYV+FL I PD + +++ ++N+GEDCPVF+ L+EFCQ+ +GG++ A +LN
Sbjct: 66 YHSDDYVKFLRTIRPDNMSEYTKQMQRFNVGEDCPVFDGLYEFCQLSSGGSVAGAVKLNK 125
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
Q DIAINWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEA
Sbjct: 126 QQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 185
Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
FY TDRVMTVSFHK+G+ +FPGTGD+++IG +GK+YA+N PL+DGIDD S+ ++FK I+
Sbjct: 186 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPLRDGIDDESYDKIFKPIM 244
Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
KV+E Y P AI LQCGADSL+GDRLGCFNL++ GHA+CV F+K++NLPLL+ GGGGYT
Sbjct: 245 CKVMEMYQPSAICLQCGADSLSGDRLGCFNLTLKGHAKCVEFMKQYNLPLLLMGGGGYTI 304
Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQ 362
NVARCWT ET L E+ NE+P N+Y +YF P+ L I ++ N N+ YL IK +
Sbjct: 305 RNVARCWTYETSTALGVEIANELPYNDYFEYFGPDFKLHISPSNMTNQNTGEYLDKIKTR 364
Query: 363 VLENLRSIQHAPSVQMQEVPPDFYIPEFD-EDE-QNPDERMDQHTQDKQIQRDDEFYEGD 420
+ EN+R I HAP VQMQ +P D + D EDE +NPD+R+ QDK+IQRDDEF + +
Sbjct: 365 LYENMRMIPHAPGVQMQPIPEDAIPDDSDAEDEAENPDKRISIMAQDKRIQRDDEFSDSE 424
Query: 421 NDND 424
++ +
Sbjct: 425 DEGE 428
>sp|Q92769|HDAC2_HUMAN Histone deacetylase 2 OS=Homo sapiens GN=HDAC2 PE=1 SV=2
Length = 488
Score = 529 bits (1363), Expect = e-149, Method: Compositional matrix adjust.
Identities = 247/422 (58%), Positives = 328/422 (77%), Gaps = 2/422 (0%)
Query: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
K K+ Y+YDGD+G+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA E+ ++
Sbjct: 9 KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68
Query: 64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
HS +Y++FL I PD + +++ ++N+GEDCPVF+ LFEFCQ+ GG++ A +LN Q
Sbjct: 69 HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128
Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188
Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
Y TDRVMTVSFHK+G+ +FPGTGD+++IG +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 189 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 247
Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV VK FNLPLL+ GGGGYT
Sbjct: 248 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 307
Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQV 363
NVARCWT ET + LD E+PNE+P N+Y +YF P+ L I ++ N N+ Y+ IK ++
Sbjct: 308 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRL 367
Query: 364 LENLRSIQHAPSVQMQEVPPD-FYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDND 422
ENLR + HAP VQMQ +P D + DED ++PD+R+ DK+I D+EF + +++
Sbjct: 368 FENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDE 427
Query: 423 ND 424
+
Sbjct: 428 GE 429
>sp|P70288|HDAC2_MOUSE Histone deacetylase 2 OS=Mus musculus GN=Hdac2 PE=1 SV=1
Length = 488
Score = 528 bits (1360), Expect = e-149, Method: Compositional matrix adjust.
Identities = 246/422 (58%), Positives = 327/422 (77%), Gaps = 2/422 (0%)
Query: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
K K+ Y+YDGD+G+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA E+ ++
Sbjct: 9 KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68
Query: 64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
HS +Y++FL I PD + +++ ++N+GEDCPVF+ LFEFCQ+ GG++ A +LN Q
Sbjct: 69 HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128
Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188
Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
Y TDRVMTVSFHK+G+ +FPGTGD+++IG +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 189 YTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 247
Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV K FNLPLL+ GGGGYT
Sbjct: 248 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVAKTFNLPLLMLGGGGYTIR 307
Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQV 363
NVARCWT ET + LD E+PNE+P N+Y +YF P+ L I ++ N N+ Y+ IK ++
Sbjct: 308 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRL 367
Query: 364 LENLRSIQHAPSVQMQEVPPD-FYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDND 422
ENLR + HAP VQMQ +P D + DED ++PD+R+ DK+I D+EF + +++
Sbjct: 368 FENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDE 427
Query: 423 ND 424
+
Sbjct: 428 GE 429
>sp|Q94517|HDAC1_DROME Histone deacetylase Rpd3 OS=Drosophila melanogaster GN=Rpd3 PE=1
SV=2
Length = 521
Score = 528 bits (1359), Expect = e-149, Method: Compositional matrix adjust.
Identities = 243/423 (57%), Positives = 326/423 (77%), Gaps = 2/423 (0%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
SK ++ Y+YD D+G+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA E+ +
Sbjct: 5 SKKRVCYYYDSDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATADEMTK 64
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
FHS +YV FL I PD + +++ ++N+GEDCPVF+ L+EFCQ+ AGG++ AA +LN
Sbjct: 65 FHSDEYVRFLRSIRPDNMSEYNKQMQRFNVGEDCPVFDGLYEFCQLSAGGSVAAAVKLNK 124
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
Q +I INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDIDVHHGDGVEEA
Sbjct: 125 QASEICINWGGGLHHAKKSEASGFCYVNDIVLGILELLKYHQRVLYIDIDVHHGDGVEEA 184
Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
FY TDRVMTVSFHK+G+ +FPGTGD+++IG +GK+YA+N+PL+DG+DD ++ +F II
Sbjct: 185 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNIPLRDGMDDDAYESIFVPII 243
Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
SKV+ET+ P A+VLQCGADSL GDRLGCFNL++ GH +CV FVKK+NLP L+ GGGGYT
Sbjct: 244 SKVMETFQPAAVVLQCGADSLTGDRLGCFNLTVKGHGKCVEFVKKYNLPFLMVGGGGYTI 303
Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQ 362
NV+RCWT ET + L E+ NE+P N+Y +YF P+ L I ++ N N+ YL IK +
Sbjct: 304 RNVSRCWTYETSVALAVEIANELPYNDYFEYFGPDFKLHISPSNMTNQNTSEYLEKIKNR 363
Query: 363 VLENLRSIQHAPSVQMQEVPPDFYIPE-FDEDEQNPDERMDQHTQDKQIQRDDEFYEGDN 421
+ ENLR + HAP VQ+Q +P D E DED+ + D+R+ Q +DK+I ++E+ + ++
Sbjct: 364 LFENLRMLPHAPGVQIQAIPEDAINDESDDEDKVDKDDRLPQSDKDKRIVPENEYSDSED 423
Query: 422 DND 424
+ +
Sbjct: 424 EGE 426
>sp|P56520|HDAC3_CHICK Histone deacetylase 3 OS=Gallus gallus GN=HDAC3 PE=2 SV=1
Length = 428
Score = 527 bits (1357), Expect = e-149, Method: Compositional matrix adjust.
Identities = 244/420 (58%), Positives = 320/420 (76%), Gaps = 5/420 (1%)
Query: 7 ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
++YFYD DVG+ ++G HPMKPHRL +TH LVL Y L+KKM +++P++A ++ +FHS
Sbjct: 5 VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64
Query: 67 DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
DY++FL R++P+ F + L +N+G+DCPVF LFEFC Y G ++ A +LNN++CD
Sbjct: 65 DYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124
Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184
Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
DRVMTVSFHK+G+ FFPGTGD+ E+G G++YA+NVPL+DGIDD S+ LF+ +I++VV
Sbjct: 185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYALNVPLRDGIDDQSYKHLFQPVINQVV 244
Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
+ Y P IVLQCGADSL DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT NVA
Sbjct: 245 DYYQPTCIVLQCGADSLGRDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304
Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLE 365
RCWT ET +L+D + E+P +EY +YFAP+ +L + IEN NS+ YL I+ + E
Sbjct: 305 RCWTYETSLLVDEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364
Query: 366 NLRSIQHAPSVQMQEVPPDFYIPEFDE-DEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 424
NL+ + HAPSVQ+ +VP D + +D DE +P+ER + + + +EFY+GD+DND
Sbjct: 365 NLKMLNHAPSVQIHDVPSD--LLSYDRTDEPDPEERGSEENYSRP-EAANEFYDGDHDND 421
>sp|Q28DV3|HDAC3_XENTR Histone deacetylase 3 OS=Xenopus tropicalis GN=hdac3 PE=2 SV=1
Length = 428
Score = 524 bits (1349), Expect = e-148, Method: Compositional matrix adjust.
Identities = 241/419 (57%), Positives = 317/419 (75%), Gaps = 3/419 (0%)
Query: 7 ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
++YFYD DVG+ ++G HPMKPHRL +TH LVL Y L+KKM +++P++A ++ +FHS
Sbjct: 5 VAYFYDPDVGNFHYGTGHPMKPHRLSLTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64
Query: 67 DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
DY++FL R++P+ F + L +N+G+DCPVF LFEFC Y G ++ A +LNN++CD
Sbjct: 65 DYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124
Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLY+DID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYVDIDIHHGDGVQEAFYLT 184
Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
DRVMTVSFHK+G+ FFPGTGD+ E+G G++Y +NVPL+DGIDD S+ LF+ +I +V+
Sbjct: 185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRHLFQPVIKQVI 244
Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
+ Y P IVLQCGADSL DRLGCFNLSI GH ECV++VK FN+PLLV GGGGYT NVA
Sbjct: 245 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVQYVKSFNIPLLVLGGGGYTVRNVA 304
Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLE 365
RCWT ET +L+D + E+P +EY +YFAP+ +L + IEN NS+ YL I+ + E
Sbjct: 305 RCWTYETSLLVDETISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364
Query: 366 NLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 424
NL+ + HAPSVQ+ +VP D E DE +P+ER + + + +EFY+GD+DND
Sbjct: 365 NLKMLNHAPSVQIHDVPSDILSYE-RTDEPDPEERGSEDNYSRP-EASNEFYDGDHDND 421
>sp|Q4SFA0|HDAC3_TETNG Histone deacetylase 3 OS=Tetraodon nigroviridis GN=hdac3 PE=3 SV=1
Length = 428
Score = 523 bits (1347), Expect = e-147, Method: Compositional matrix adjust.
Identities = 244/421 (57%), Positives = 318/421 (75%), Gaps = 3/421 (0%)
Query: 5 DKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFH 64
++ SYFYD DVG+ ++G HPMKPHRL +TH LVL Y L+KKM +++P+KA ++ +FH
Sbjct: 3 NRTSYFYDPDVGNFHYGAGHPMKPHRLSLTHSLVLHYGLYKKMMVFKPYKASQHDMCRFH 62
Query: 65 SADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
S DY++FL +++P+ F + L +N+G+DCPVF LFEFC Y G ++ A +LN+++
Sbjct: 63 SEDYIDFLQKVSPNNMQGFTKSLNTFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNHKI 122
Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
CDIAINWAGGLHHAKK EASGFCY+ND+V+ ILELLKYH RVLYIDID+HHGDGV+EAFY
Sbjct: 123 CDIAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYHPRVLYIDIDIHHGDGVQEAFY 182
Query: 185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
TDRVMTVSFHK+G+ FFPGTGD+ E+G G++Y +NVPL+DGIDD S+ +LF+ +I +
Sbjct: 183 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVIKQ 242
Query: 245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
VV+ Y P IVLQCGADSL DRLGCFNLSI GH ECV FVK F +PLLV GGGGYT N
Sbjct: 243 VVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEFVKSFKIPLLVLGGGGYTVRN 302
Query: 305 VARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQV 363
VARCWT ET +LL+ + +E+P +EY +YFAP+ +L + IEN NS+ YL I+ V
Sbjct: 303 VARCWTFETSLLLEESISDELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLEQIRQTV 362
Query: 364 LENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDN 423
ENL+ + HAPSVQ+ +VP D E + DE +PDER + + + +EFY+GD+DN
Sbjct: 363 FENLKMLNHAPSVQIHDVPSDMLNYERN-DEPDPDERGAEENYTRP-EAANEFYDGDHDN 420
Query: 424 D 424
D
Sbjct: 421 D 421
>sp|Q55BW2|HDA12_DICDI Histone deacetylase B OS=Dictyostelium discoideum GN=hdaB PE=2 SV=1
Length = 422
Score = 523 bits (1346), Expect = e-147, Method: Compositional matrix adjust.
Identities = 244/411 (59%), Positives = 324/411 (78%), Gaps = 10/411 (2%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
SK ++ YF+D DVG+ ++GP HPMKPHRLC+T++LVL+Y LHKKM +Y+ A ++ +
Sbjct: 11 SKTRVCYFFDQDVGNYFYGPYHPMKPHRLCLTNNLVLNYGLHKKMHLYKARPADAEDMLK 70
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
FHS DYV+FL R+TP+ + ++ ++ ++++GEDCPVF L+++C IY+GG+I+ A +LN+
Sbjct: 71 FHSEDYVDFLERVTPENINEWK-DVKRFHIGEDCPVFPGLYDYCSIYSGGSIEGALKLNH 129
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
++ DIAINW+GGLHHA+K EASGFCY+ND+VL ILELLK+HARVLYIDIDVHHGDGV+EA
Sbjct: 130 RMYDIAINWSGGLHHARKDEASGFCYVNDIVLAILELLKFHARVLYIDIDVHHGDGVQEA 189
Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
FY TDRVMTVSFHKFG FFPGTGD+ EIG + GK Y++NVPL DGIDD ++ +FK +I
Sbjct: 190 FYLTDRVMTVSFHKFGGDFFPGTGDIDEIGAKTGKLYSVNVPLADGIDDKNYLNIFKPVI 249
Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
V++ Y P IVLQCGADSL DRLGCFNL+I GHAECVRFVK FN+P LV GGGGYT
Sbjct: 250 QGVMDYYRPSVIVLQCGADSLRFDRLGCFNLTIKGHAECVRFVKSFNIPTLVLGGGGYTV 309
Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPN-----GHIENLNSKSYLS 357
NVARCWT ET + +DTE+ NE+P N+YI++++P+ L IP+ EN N+KSYL
Sbjct: 310 RNVARCWTYETSVCVDTEVNNELPYNDYIQFYSPDFQL-IPDYTGLPFKYENANTKSYLE 368
Query: 358 TIKMQVLENLRSIQHAPSVQMQEVPPDFYIPEFDEDE---QNPDERMDQHT 405
++++++LENLR +Q APSVQ+Q+VPPD +FD DE +N D+R +H
Sbjct: 369 SLRIKILENLRILQWAPSVQIQDVPPDIMPIDFDRDEDSKENMDKRKKKHN 419
>sp|O88895|HDAC3_MOUSE Histone deacetylase 3 OS=Mus musculus GN=Hdac3 PE=1 SV=1
Length = 424
Score = 521 bits (1342), Expect = e-147, Method: Compositional matrix adjust.
Identities = 242/423 (57%), Positives = 315/423 (74%), Gaps = 11/423 (2%)
Query: 7 ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
++YFYD DVG+ ++G HPMKPHRL +TH LVL Y L+KKM +++P++A ++ +FHS
Sbjct: 5 VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64
Query: 67 DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
DY++FL R++P F + L +N+G+DCPVF LFEFC Y G ++ A +LNN++CD
Sbjct: 65 DYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124
Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184
Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
DRVMTVSFHK+G+ FFPGTGD+ E+G G++Y +NVPL+DGIDD S+ LF+ +IS+VV
Sbjct: 185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVV 244
Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
+ Y P IVLQCGADSL DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT NVA
Sbjct: 245 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304
Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLE 365
RCWT ET +L++ + E+P +EY +YFAP+ +L + IEN NS+ YL I+ + E
Sbjct: 305 RCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364
Query: 366 NLRSIQHAPSVQMQEVPPDFY----IPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDN 421
NL+ + HAPSVQ+ +VP D E D +E+ P+E + + +EFY+GD+
Sbjct: 365 NLKMLNHAPSVQIHDVPADLLTYDRTDEADAEERGPEENY------SRPEAPNEFYDGDH 418
Query: 422 DND 424
DND
Sbjct: 419 DND 421
>sp|Q6P6W3|HDAC3_RAT Histone deacetylase 3 OS=Rattus norvegicus GN=Hdac3 PE=1 SV=1
Length = 428
Score = 520 bits (1340), Expect = e-147, Method: Compositional matrix adjust.
Identities = 242/423 (57%), Positives = 315/423 (74%), Gaps = 11/423 (2%)
Query: 7 ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
++YFYD DVG+ ++G HPMKPHRL +TH LVL Y L+KKM +++P++A ++ +FHS
Sbjct: 5 VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64
Query: 67 DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
DY++FL R++P F + L +N+G+DCPVF LFEFC Y G ++ A +LNN++CD
Sbjct: 65 DYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124
Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184
Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
DRVMTVSFHK+G+ FFPGTGD+ E+G G++Y +NVPL+DGIDD S+ LF+ +IS+VV
Sbjct: 185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVISQVV 244
Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
+ Y P IVLQCGADSL DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT NVA
Sbjct: 245 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304
Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLE 365
RCWT ET +L++ + E+P +EY +YFAP+ +L + IEN NS+ YL I+ + E
Sbjct: 305 RCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364
Query: 366 NLRSIQHAPSVQMQEVPPDFY----IPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDN 421
NL+ + HAPSVQ+ +VP D E D +E+ P+E + + +EFY+GD+
Sbjct: 365 NLKMLNHAPSVQIHDVPADLLTYDRTDEADAEERGPEENY------SRPEAPNEFYDGDH 418
Query: 422 DND 424
DND
Sbjct: 419 DND 421
>sp|O15379|HDAC3_HUMAN Histone deacetylase 3 OS=Homo sapiens GN=HDAC3 PE=1 SV=2
Length = 428
Score = 519 bits (1336), Expect = e-146, Method: Compositional matrix adjust.
Identities = 241/423 (56%), Positives = 315/423 (74%), Gaps = 11/423 (2%)
Query: 7 ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
++YFYD DVG+ ++G HPMKPHRL +TH LVL Y L+KKM +++P++A ++ +FHS
Sbjct: 5 VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64
Query: 67 DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
DY++FL R++P F + L +N+G+DCPVF LFEFC Y G ++ A +LNN++CD
Sbjct: 65 DYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124
Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184
Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
DRVMTVSFHK+G+ FFPGTGD+ E+G G++Y +NVPL+DGIDD S+ LF+ +I++VV
Sbjct: 185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVV 244
Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
+ Y P IVLQCGADSL DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT NVA
Sbjct: 245 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304
Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLE 365
RCWT ET +L++ + E+P +EY +YFAP+ +L + IEN NS+ YL I+ + E
Sbjct: 305 RCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364
Query: 366 NLRSIQHAPSVQMQEVPPDFY----IPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDN 421
NL+ + HAPSVQ+ +VP D E D +E+ P+E + + +EFY+GD+
Sbjct: 365 NLKMLNHAPSVQIHDVPADLLTYDRTDEADAEERGPEENY------SRPEAPNEFYDGDH 418
Query: 422 DND 424
DND
Sbjct: 419 DND 421
>sp|Q6IRL9|HDAC3_XENLA Histone deacetylase 3 OS=Xenopus laevis GN=hdac3 PE=2 SV=2
Length = 428
Score = 519 bits (1336), Expect = e-146, Method: Compositional matrix adjust.
Identities = 242/419 (57%), Positives = 315/419 (75%), Gaps = 3/419 (0%)
Query: 7 ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
++YFYD DVG+ ++G HPMKPHRL +TH LVL Y L+KKM +++P++A ++ +FHS
Sbjct: 5 VAYFYDPDVGNFHYGTGHPMKPHRLSLTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64
Query: 67 DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
DY++FL R++P+ F + L +N+G+DCPVF LFEFC Y G ++ A LNN+ CD
Sbjct: 65 DYIDFLQRVSPNNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATLLNNKNCD 124
Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184
Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
DRVMTVSFHK+G+ FFPGTGD+ E+G G++Y +NVPL+DGIDD S+ LF+ +I +V+
Sbjct: 185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRHLFQPVIKQVI 244
Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
+ Y P IVLQCGADSL DRLGCFNLSI GH ECV++VK FN+PLLV GGGGYT NVA
Sbjct: 245 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVQYVKSFNIPLLVLGGGGYTVRNVA 304
Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLE 365
RCWT ET +L+D + E+P +EY +YFAP+ +L + IEN NS+ YL I+ V E
Sbjct: 305 RCWTYETSLLVDETISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTVFE 364
Query: 366 NLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 424
+L+ + HAPSVQ+ +VP D E DE +P+ER + + + +EFY+GD+DND
Sbjct: 365 SLKMLNHAPSVQIHDVPSDILNYE-RTDEPDPEERGGEDNYSRP-EASNEFYDGDHDND 421
>sp|Q5RB76|HDAC3_PONAB Histone deacetylase 3 OS=Pongo abelii GN=HDAC3 PE=2 SV=1
Length = 428
Score = 517 bits (1331), Expect = e-146, Method: Compositional matrix adjust.
Identities = 240/423 (56%), Positives = 315/423 (74%), Gaps = 11/423 (2%)
Query: 7 ISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSA 66
++YFYD DVG+ ++G HPMKPHRL +TH LVL Y L+KKM +++P++A ++ +FHS
Sbjct: 5 VAYFYDPDVGNFHYGAGHPMKPHRLALTHSLVLHYGLYKKMIVFKPYQASQHDMCRFHSE 64
Query: 67 DYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCD 126
DY++FL R++P F + L +N+G+DCPVF LFEFC Y G ++ A +LNN++CD
Sbjct: 65 DYIDFLQRVSPTNMQGFTKSLNAFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNNKICD 124
Query: 127 IAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFT 186
IAINWAGGLHHAKK EASGFCY+ND+V+GILELLKYH RVLYIDID+HHGDGV+EAFY T
Sbjct: 125 IAINWAGGLHHAKKFEASGFCYVNDIVIGILELLKYHPRVLYIDIDIHHGDGVQEAFYLT 184
Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
DRVMTVSFHK+G+ FFPGTGD+ E+G G++Y +NVPL+DGIDD S+ LF+ +I++VV
Sbjct: 185 DRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYKHLFQPVINQVV 244
Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVA 306
+ Y P IVLQCGADSL DRLGCFNLSI GH ECV +VK FN+PLLV GGGGYT NVA
Sbjct: 245 DFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEYVKSFNIPLLVLGGGGYTVRNVA 304
Query: 307 RCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQVLE 365
RCWT ET +L++ + E+P +EY +YFAP+ +L + IEN NS+ YL I+ + E
Sbjct: 305 RCWTYETSLLVEEAISEELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLDQIRQTIFE 364
Query: 366 NLRSIQHAPSVQMQEVPPDFY----IPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDN 421
NL+ + HAPSVQ+++VP E D +E+ P+E + + +EFY+GD+
Sbjct: 365 NLKMLNHAPSVQIRDVPAGLLTYDRTDEADAEERGPEENY------SRPEAPNEFYDGDH 418
Query: 422 DND 424
DND
Sbjct: 419 DND 421
>sp|Q803C3|HDAC3_DANRE Histone deacetylase 3 OS=Danio rerio GN=hdac3 PE=2 SV=1
Length = 428
Score = 516 bits (1330), Expect = e-145, Method: Compositional matrix adjust.
Identities = 240/421 (57%), Positives = 317/421 (75%), Gaps = 3/421 (0%)
Query: 5 DKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFH 64
++ +YFYD DVG+ ++G HPMKPHRL +TH LVL Y L+KKM +++P+KA ++ +FH
Sbjct: 3 NRTAYFYDPDVGNFHYGAGHPMKPHRLSLTHSLVLHYGLYKKMMVFKPYKASQHDMCRFH 62
Query: 65 SADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
S DY++FL +++P+ F + L +N+G DCPVF LFEFC Y G ++ A +LN+++
Sbjct: 63 SEDYIDFLQKVSPNNMQGFTKSLNTFNVGGDCPVFPGLFEFCSRYTGASLQGATQLNHKI 122
Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
CDIAINWAGGLHHAKK EASGFCY+ND+V+ ILELLKYH RVLYIDID+HHGDGV+EAFY
Sbjct: 123 CDIAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYHPRVLYIDIDIHHGDGVQEAFY 182
Query: 185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
TDRVMTVSFHK+G+ FFPGTGD+ E+G G++Y +NVPL+DGIDD S+ +LF+ +I +
Sbjct: 183 LTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVIKQ 242
Query: 245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
VV+ Y P IVLQCGADSL DRLGCFNLSI GH ECV FVK F +PLLV GGGGYT N
Sbjct: 243 VVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEFVKGFKIPLLVLGGGGYTVRN 302
Query: 305 VARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIP-NGHIENLNSKSYLSTIKMQV 363
VARCWT ET +L++ + +E+P +EY +YFAP+ +L + IEN NS+ YL I+ V
Sbjct: 303 VARCWTFETSLLVEESISDELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLEQIRQTV 362
Query: 364 LENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDN 423
ENL+ + HAPSVQ+++VP D E DE +P+ER + + + +EFY+GD+D+
Sbjct: 363 FENLKMLNHAPSVQIRDVPSDLLSYE-RPDEADPEERGSEENFSRP-EAANEFYDGDHDH 420
Query: 424 D 424
D
Sbjct: 421 D 421
>sp|P56519|HDAC2_CHICK Histone deacetylase 2 OS=Gallus gallus GN=HDAC2 PE=2 SV=1
Length = 488
Score = 514 bits (1323), Expect = e-145, Method: Compositional matrix adjust.
Identities = 243/422 (57%), Positives = 322/422 (76%), Gaps = 2/422 (0%)
Query: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
K K+ Y+YDGD+G+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEIYRPHKA E+ ++
Sbjct: 9 KKKVCYYYDGDIGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKATAEEMTKY 68
Query: 64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
HS +Y++FL I PD + +++ ++N+GEDCPVF+ LFEFCQ+ GG++ A +LN Q
Sbjct: 69 HSDEYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSTGGSVAGAVKLNRQ 128
Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
D+A+NWAGGLHHAKK EASGFCY+ND+VL ILELLKYH RVLYIDID+HHGDGVEEAF
Sbjct: 129 QTDMAVNWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEAF 188
Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
Y TDRVMTVS + FPGTGD+++IG +GK+YA+N P++DGIDD S+ ++FK IIS
Sbjct: 189 YTTDRVMTVSEVSMVN-NFPGTGDLRDIGAGKGKYYAVNFPMRDGIDDESYGQIFKPIIS 247
Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
KV+E Y P A+VLQCGADSL+GDRLGCFNL++ GHA+CV VK FNLPLL+ GGGGYT
Sbjct: 248 KVMEMYQPSAVVLQCGADSLSGDRLGCFNLTVKGHAKCVEVVKTFNLPLLMLGGGGYTIR 307
Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQV 363
NVARCWT ET + LD E+PNE+P N+Y +YF P+ L I ++ N N+ Y+ IK ++
Sbjct: 308 NVARCWTYETAVALDCEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTPEYMEKIKQRL 367
Query: 364 LENLRSIQHAPSVQMQEVPPD-FYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDND 422
ENLR + HAP VQMQ +P D + DED ++PD+R+ DK+I D+EF + +++
Sbjct: 368 FENLRMLPHAPGVQMQAIPEDAVHEDSGDEDGEDPDKRISIRASDKRIACDEEFSDSEDE 427
Query: 423 ND 424
+
Sbjct: 428 GE 429
>sp|Q91695|HDA1A_XENLA Probable histone deacetylase 1-A OS=Xenopus laevis GN=hdac1-a PE=1
SV=1
Length = 480
Score = 513 bits (1322), Expect = e-145, Method: Compositional matrix adjust.
Identities = 245/423 (57%), Positives = 331/423 (78%), Gaps = 2/423 (0%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
+K K+ Y+YDGDVG+ Y+G HPMKPHR+ MTH+L+L+Y L++KMEI+RPHKA ++ +
Sbjct: 7 TKKKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIFRPHKASAEDMTK 66
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
+HS DY++FL I PD + +++ ++N+GEDCPVF+ LFEFCQ+ AGG++ +A +LN
Sbjct: 67 YHSDDYIKFLRSIRPDNMSEYSKQMQRFNVGEDCPVFDGLFEFCQLSAGGSVASAVKLNK 126
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
Q DI++NW+GGLHHAKK EASGFCY+ND+VL ILELLKYH RV+YIDID+HHGDGVEEA
Sbjct: 127 QQTDISVNWSGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVVYIDIDIHHGDGVEEA 186
Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
FY TDRVMTVSFHK+G+ +FPGTGD+++IG +GK+YA+N L+DGIDD S+ +FK ++
Sbjct: 187 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYALRDGIDDESYEAIFKPVM 245
Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
SKV+E + P A+VLQCGADSL+GDRLGCFNL+I GHA+CV F+K FNLPLL+ GGGGYT
Sbjct: 246 SKVMEMFQPSAVVLQCGADSLSGDRLGCFNLTIKGHAKCVEFIKTFNLPLLMLGGGGYTI 305
Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQ 362
NVARCWT ET + LD+E+PNE+P N+Y +YF P+ L I ++ N N+ YL IK +
Sbjct: 306 RNVARCWTYETAVALDSEIPNELPYNDYFEYFGPDFKLHISPSNMTNQNTNEYLEKIKQR 365
Query: 363 VLENLRSIQHAPSVQMQEVPPD-FYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFYEGDN 421
+ ENLR + HAP VQMQ V D + +EDE +PD+R+ + DK+I D+EF + ++
Sbjct: 366 LFENLRMLPHAPGVQMQAVAEDSIHDDSGEEDEDDPDKRISIRSSDKRIACDEEFSDSED 425
Query: 422 DND 424
+ +
Sbjct: 426 EGE 428
>sp|O17695|HDA1_CAEEL Histone deacetylase 1 OS=Caenorhabditis elegans GN=hda-1 PE=1 SV=1
Length = 461
Score = 512 bits (1319), Expect = e-144, Method: Compositional matrix adjust.
Identities = 235/425 (55%), Positives = 312/425 (73%), Gaps = 5/425 (1%)
Query: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
K +++Y+YD ++G+ Y+G H MKPHR+ MTHHLVL+Y L++ +EI+RP A ++ +F
Sbjct: 12 KRRVAYYYDSNIGNYYYGQGHVMKPHRIRMTHHLVLNYGLYRNLEIFRPFPASFEDMTRF 71
Query: 64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
HS +Y+ FL PD F +++ K+N+GEDCP+F+ L+EFCQ+ +GG++ AA +LN Q
Sbjct: 72 HSDEYMTFLKSANPDNLKSFNKQMLKFNVGEDCPLFDGLYEFCQLSSGGSLAAATKLNKQ 131
Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
DIAINW GGLHHAKK EASGFCY ND+VLGILELLKYH RVLY+DIDVHHGDGVEEAF
Sbjct: 132 KVDIAINWMGGLHHAKKSEASGFCYTNDIVLGILELLKYHKRVLYVDIDVHHGDGVEEAF 191
Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
Y TDRVMTVSFHK+GD FFPGTGD+K+IG +GK Y++NVPL+DGI D S+ +FK I++
Sbjct: 192 YTTDRVMTVSFHKYGD-FFPGTGDLKDIGAGKGKLYSVNVPLRDGITDVSYQSIFKPIMT 250
Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
KV+E + P A+VLQCGADSL GDRLG FNL++ GH EC RF + +N+PL++ GGGGYT
Sbjct: 251 KVMERFDPCAVVLQCGADSLNGDRLGPFNLTLKGHGECARFFRSYNVPLMMVGGGGYTPR 310
Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQV 363
NVARCWT ET I +D E+PNE+P N+Y +YF P L I + + N NS L+ ++ V
Sbjct: 311 NVARCWTYETSIAVDKEVPNELPYNDYFEYFGPNYRLHIESSNAANENSSDMLAKLQTDV 370
Query: 364 LENLRSIQHAPSVQMQEVPPDFYIPEFDE----DEQNPDERMDQHTQDKQIQRDDEFYEG 419
+ NL + PSVQM+ +P D D+ D+ NPD+R+ D IQ D +FY+G
Sbjct: 371 IANLEQLTFVPSVQMRPIPEDALSALNDDSLIADQANPDKRLPPQITDGMIQDDGDFYDG 430
Query: 420 DNDND 424
+ + D
Sbjct: 431 EREGD 435
>sp|O22446|HDA19_ARATH Histone deacetylase 19 OS=Arabidopsis thaliana GN=HDA19 PE=1 SV=2
Length = 501
Score = 504 bits (1297), Expect = e-142, Method: Compositional matrix adjust.
Identities = 240/397 (60%), Positives = 308/397 (77%), Gaps = 1/397 (0%)
Query: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
K K+ YFYD +VG+ Y+G HPMKPHR+ MTH L+ Y L + M++ +P A +L +F
Sbjct: 16 KRKVCYFYDPEVGNYYYGQGHPMKPHRIRMTHALLAHYGLLQHMQVLKPFPARDRDLCRF 75
Query: 64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
H+ DYV FL ITP+TQ ++L ++N+GEDCPVF+ L+ FCQ YAGG++ + +LN+
Sbjct: 76 HADDYVSFLRSITPETQQDQIRQLKRFNVGEDCPVFDGLYSFCQTYAGGSVGGSVKLNHG 135
Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
LCDIAINWAGGLHHAKKCEASGFCY+ND+VL ILELLK H RVLY+DID+HHGDGVEEAF
Sbjct: 136 LCDIAINWAGGLHHAKKCEASGFCYVNDIVLAILELLKQHERVLYVDIDIHHGDGVEEAF 195
Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
Y TDRVMTVSFHKFGD +FPGTG +++IG GK+Y++NVPL DGIDD S+ LFK I+
Sbjct: 196 YATDRVMTVSFHKFGD-YFPGTGHIQDIGYGSGKYYSLNVPLDDGIDDESYHLLFKPIMG 254
Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECV+F++ FN+PLL+ GGGGYT
Sbjct: 255 KVMEIFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVKFMRSFNVPLLLLGGGGYTIR 314
Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQV 363
NVARCW ETG+ L E+ +++PE+EY +YF P+ +L + ++EN NS+ L I+ +
Sbjct: 315 NVARCWCYETGVALGVEVEDKMPEHEYYEYFGPDYTLHVAPSNMENKNSRQMLEEIRNDL 374
Query: 364 LENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDER 400
L NL +QHAPSV QE PPD PE DED+++ D+R
Sbjct: 375 LHNLSKLQHAPSVPFQERPPDTETPEVDEDQEDGDKR 411
>sp|P32561|RPD3_YEAST Histone deacetylase RPD3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RPD3 PE=1 SV=1
Length = 433
Score = 493 bits (1269), Expect = e-138, Method: Compositional matrix adjust.
Identities = 223/417 (53%), Positives = 305/417 (73%), Gaps = 4/417 (0%)
Query: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
K +++YFYD DVG+ +G HPMKPHR+ M H L+++Y L+KKMEIYR A E+ QF
Sbjct: 18 KRRVAYFYDADVGNYAYGAGHPMKPHRIRMAHSLIMNYGLYKKMEIYRAKPATKQEMCQF 77
Query: 64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
H+ +Y++FL R+TPD +F++E K+N+G+DCPVF+ L+E+C I GG+++ A RLN
Sbjct: 78 HTDEYIDFLSRVTPDNLEMFKRESVKFNVGDDCPVFDGLYEYCSISGGGSMEGAARLNRG 137
Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
CD+A+N+AGGLHHAKK EASGFCY+ND+VLGI+ELL+YH RVLYIDIDVHHGDGVEEAF
Sbjct: 138 KCDVAVNYAGGLHHAKKSEASGFCYLNDIVLGIIELLRYHPRVLYIDIDVHHGDGVEEAF 197
Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
Y TDRVMT SFHK+G+ FFPGTG++++IG GK YA+NVPL+DGIDD ++ +F+ +I
Sbjct: 198 YTTDRVMTCSFHKYGE-FFPGTGELRDIGVGAGKNYAVNVPLRDGIDDATYRSVFEPVIK 256
Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
K++E Y P A+VLQCG DSL+GDRLGCFNLS++GHA CV +VK F +P++V GGGGYT
Sbjct: 257 KIMEWYQPSAVVLQCGGDSLSGDRLGCFNLSMEGHANCVNYVKSFGIPMMVVGGGGYTMR 316
Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQV 363
NVAR W ETG+L + L ++P NEY +Y+ P+ L + ++ N+N+ YL + +
Sbjct: 317 NVARTWCFETGLLNNVVLDKDLPYNEYYEYYGPDYKLSVRPSNMFNVNTPEYLDKVMTNI 376
Query: 364 LENLRSIQHAPSVQMQEVP---PDFYIPEFDEDEQNPDERMDQHTQDKQIQRDDEFY 417
NL + ++APSVQ+ P D E D E + Q+ +D ++ D+EFY
Sbjct: 377 FANLENTKYAPSVQLNHTPRDAEDLGDVEEDSAEAKDTKGGSQYARDLHVEHDNEFY 433
>sp|O59702|CLR6_SCHPO Histone deacetylase clr6 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=clr6 PE=1 SV=1
Length = 405
Score = 486 bits (1251), Expect = e-136, Method: Compositional matrix adjust.
Identities = 224/401 (55%), Positives = 300/401 (74%), Gaps = 1/401 (0%)
Query: 3 SKDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQ 62
K K+SYFYD DVG+ ++GP HPMKPHR+ M H+LV++Y+L++K+ + P +A ++ +
Sbjct: 4 GKKKVSYFYDEDVGNYHYGPQHPMKPHRVRMVHNLVVNYNLYEKLNVITPVRATRNDMTR 63
Query: 63 FHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
H+ +Y+EFL R+TPDT F+ K+N+G+DCPVF+ L+EFC I AGG+I AA+ LN+
Sbjct: 64 CHTDEYIEFLWRVTPDTMEKFQPHQLKFNVGDDCPVFDGLYEFCSISAGGSIGAAQELNS 123
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
+IAINWAGGLHHAKK EASGFCY+ND+ L LELLKYH RVLYIDIDVHHGDGVEE
Sbjct: 124 GNAEIAINWAGGLHHAKKREASGFCYVNDIALAALELLKYHQRVLYIDIDVHHGDGVEEF 183
Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
FY TDRVMT SFHKFG+ +FPGTG +K+ G GK YA+NVPL+DGIDD S+ +FK +I
Sbjct: 184 FYTTDRVMTCSFHKFGE-YFPGTGHIKDTGIGTGKNYAVNVPLRDGIDDESYESVFKPVI 242
Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
S +++ + P A++LQCG DSLAGDRLGCFNLS+ GH+ CV FVK FNLP++ GGGGYT
Sbjct: 243 SHIMQWFRPEAVILQCGTDSLAGDRLGCFNLSMKGHSMCVDFVKSFNLPMICVGGGGYTV 302
Query: 303 ENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQ 362
NVAR WT ETG+L EL +P N+Y++Y+ P+ L + + ++EN N++ YL +I +
Sbjct: 303 RNVARVWTYETGLLAGEELDENLPYNDYLQYYGPDYKLNVLSNNMENHNTRQYLDSITSE 362
Query: 363 VLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERMDQ 403
++ENLR++ APSVQM + P DF ++ +E MD+
Sbjct: 363 IIENLRNLSFAPSVQMHKTPGDFTFENAEKQNIAKEEIMDE 403
>sp|Q9FML2|HDA6_ARATH Histone deacetylase 6 OS=Arabidopsis thaliana GN=HDA6 PE=1 SV=1
Length = 471
Score = 486 bits (1250), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/424 (54%), Positives = 305/424 (71%), Gaps = 12/424 (2%)
Query: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
K ++SYFY+ +G Y+G HPMKPHR+ M H L++ Y LH+++EI RP A ++ +F
Sbjct: 18 KRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHSLIIHYHLHRRLEISRPSLADASDIGRF 77
Query: 64 HSADYVEFLHRITPDTQH--LFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLN 121
HS +YV+FL ++P++ + L ++N+GEDCPVF+ LF+FC+ AGG+I AA +LN
Sbjct: 78 HSPEYVDFLASVSPESMGDPSAARNLRRFNVGEDCPVFDGLFDFCRASAGGSIGAAVKLN 137
Query: 122 NQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEE 181
Q DIAINW GGLHHAKK EASGFCY+ND+VLGILELLK RVLYIDIDVHHGDGVEE
Sbjct: 138 RQDADIAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKMFKRVLYIDIDVHHGDGVEE 197
Query: 182 AFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTI 241
AFY TDRVMTVSFHKFGD FFPGTG ++++G +GK+YA+NVPL DG+DD SF LF+ +
Sbjct: 198 AFYTTDRVMTVSFHKFGD-FFPGTGHIRDVGAEKGKYYALNVPLNDGMDDESFRSLFRPL 256
Query: 242 ISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYT 301
I KV+E Y P A+VLQCGADSL+GDRLGCFNLS+ GHA+C+RF++ +N+PL+V GGGGYT
Sbjct: 257 IQKVMEVYQPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSYNVPLMVLGGGGYT 316
Query: 302 KENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKM 361
NVARCW ET + + E N++P NEY +YF P+ +L + +ENLN+ + I+
Sbjct: 317 IRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHVDPSPMENLNTPKDMERIRN 376
Query: 362 QVLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERMDQHTQDK-QIQRDDEFYEGD 420
+LE L + HAPSVQ Q PP + + ED D T+ K +I YE D
Sbjct: 377 TLLEQLSGLIHAPSVQFQHTPPVNRVLDEPED--------DMETRPKPRIWSGTATYESD 428
Query: 421 NDND 424
+D+D
Sbjct: 429 SDDD 432
>sp|P56521|HDA19_MAIZE Probable histone deacetylase 19 OS=Zea mays PE=2 SV=1
Length = 513
Score = 469 bits (1206), Expect = e-131, Method: Compositional matrix adjust.
Identities = 224/384 (58%), Positives = 292/384 (76%), Gaps = 6/384 (1%)
Query: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
K ++ YFYD DVG+ Y+G HPMKPHR+ MTH L+ Y L +M++YRP+ A EL +F
Sbjct: 22 KRRVCYFYDPDVGNYYYGQGHPMKPHRIRMTHSLLARYGLLNQMQVYRPNPARERELCRF 81
Query: 64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
H+ +Y+ FL +TP+TQ + L ++N+GE+CPV + L+ FCQ YAG ++ A + N+
Sbjct: 82 HAEEYINFLRSVTPETQQDQIRLLKRFNVGEECPVLDGLYSFCQTYAGASVGGAVKFNHG 141
Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
DIAINW+GGLHHAKKCEASGFCY+ND+VL ILELLK+H RVLY+DID+HHGDGVEEAF
Sbjct: 142 H-DIAINWSGGLHHAKKCEASGFCYVNDIVLAILELLKHHERVLYVDIDIHHGDGVEEAF 200
Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
Y TDRVMTVSFHKFGD +FPGTGD+++IG +GK+Y++NVPL DGIDD S+ LFK I+
Sbjct: 201 YTTDRVMTVSFHKFGD-YFPGTGDIRDIGHSKGKYYSLNVPLDDGIDDESYQSLFKPIMG 259
Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
KV+E + PGA+VLQCGADSL+GDRLGCFNLSI GHAECVR+++ FN+PLL+ GGGGYT
Sbjct: 260 KVMEVFRPGAVVLQCGADSLSGDRLGCFNLSIKGHAECVRYMRSFNVPLLLLGGGGYTIR 319
Query: 304 NVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQV 363
NVARCW ETG+ L E +++P NEY +YF P+ +L + ++EN N++ L I+ +
Sbjct: 320 NVARCWCYETGVALGQEPEDKMPVNEYYEYFGPDYTLHVAPSNMENKNTRQQLDDIRSK- 378
Query: 364 LENLRSIQHAPSVQMQEVPPDFYI 387
L ++HAPSV QE PD I
Sbjct: 379 ---LSKLRHAPSVHFQERVPDTEI 399
>sp|O13298|PHD1_SCHPO Histone deacetylase phd1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=phd1 PE=1 SV=1
Length = 434
Score = 451 bits (1159), Expect = e-126, Method: Compositional matrix adjust.
Identities = 211/403 (52%), Positives = 289/403 (71%), Gaps = 4/403 (0%)
Query: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
K +++Y D VG+ ++G HPMKPHR+ +T+HLV+ Y LH KM ++ P A E+++F
Sbjct: 25 KKRVTYHLDEQVGNYHYGDKHPMKPHRITITNHLVMGYGLHNKMSVFSPRMATFGEMSEF 84
Query: 64 HSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
H DY++FL R+TPD F + ++N+G+DCPVF+ +EF Q AG ++DA+R+L
Sbjct: 85 HREDYLDFLKRVTPDNAEQFADKFQQFNIGDDCPVFDGTYEFSQRSAGASLDASRKLVQG 144
Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAF 183
DIAINW+GGLHHAK+ EASGFCY+ND+VL IL +L++ RVLYIDID+HHGDGV++AF
Sbjct: 145 QTDIAINWSGGLHHAKRGEASGFCYVNDIVLAILNMLRFFPRVLYIDIDIHHGDGVQQAF 204
Query: 184 YFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIS 243
Y +DRV+TVSFHK+ FFP TG+ E G + GK++A+NVPL+DGI D +T LFK+II
Sbjct: 205 YESDRVLTVSFHKYNGDFFPATGNFDENGVKGGKYFALNVPLEDGIGDEQYTSLFKSIIE 264
Query: 244 KVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKE 303
+ T+ P AIVLQCGADSL DRLG FNLSI H ECVRF + FN+P+LV GGGGYT
Sbjct: 265 PTINTFQPSAIVLQCGADSLGYDRLGVFNLSIHAHGECVRFTRSFNIPMLVVGGGGYTLR 324
Query: 304 NVARCWTVETGILLDTELPNEIP-ENEYIKYFAPECSL--RIPNGHIENLNSKSYLSTIK 360
NVAR W ET I ++ ++P+E+P E Y ++FAP+ +L R+ IEN N+ L ++
Sbjct: 325 NVARAWCYETSICVNEQIPSELPRETLYYEFFAPDYTLHPRLTT-KIENKNTPKALEDLR 383
Query: 361 MQVLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERMDQ 403
++ LE LR + APSVQMQ++PPD +EDE+ DE +D+
Sbjct: 384 IRALEQLRYLGGAPSVQMQQIPPDLTGHLEEEDERLNDEYLDK 426
>sp|P53096|HOS2_YEAST Probable histone deacetylase HOS2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=HOS2 PE=1 SV=1
Length = 452
Score = 442 bits (1137), Expect = e-123, Method: Compositional matrix adjust.
Identities = 219/415 (52%), Positives = 287/415 (69%), Gaps = 4/415 (0%)
Query: 6 KISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHS 65
++SY ++ V ++G HPMKP RL +T HLV SY LHK M++Y A EL QFHS
Sbjct: 27 RVSYHFNSKVSHYHYGVKHPMKPFRLMLTDHLVSSYGLHKIMDLYETRSATRDELLQFHS 86
Query: 66 ADYVEFLHRITPDTQH-LFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQL 124
DYV FL +++P+ + L R L +N+G+DCP+F+NL+++ +Y G ++DA R+L N
Sbjct: 87 EDYVNFLSKVSPENANKLPRGTLENFNIGDDCPIFQNLYDYTTLYTGASLDATRKLINNQ 146
Query: 125 CDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFY 184
DIAINW+GGLHHAKK SGFCY+ND+VL IL LL+YH R+LYIDID+HHGDGV+EAFY
Sbjct: 147 SDIAINWSGGLHHAKKNSPSGFCYVNDIVLSILNLLRYHPRILYIDIDLHHGDGVQEAFY 206
Query: 185 FTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISK 244
TDRV T+SFHK+ FFPGTGD+ EIG +GK +A+NVPL+DGIDD S+ LFK+I+
Sbjct: 207 TTDRVFTLSFHKYNGEFFPGTGDLTEIGCDKGKHFALNVPLEDGIDDDSYINLFKSIVDP 266
Query: 245 VVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKEN 304
++ T+ P IV QCGADSL DRLGCFNL+I H ECV+FVK F LP+LV GGGGYT N
Sbjct: 267 LIMTFKPTLIVQQCGADSLGHDRLGCFNLNIKAHGECVKFVKSFGLPMLVVGGGGYTPRN 326
Query: 305 VARCWTVETGILLDTELPNEIPEN-EYIKYFAPECSLR-IPNGHIENLNSKSYLSTIKMQ 362
V+R WT ETGIL D LP +IPE+ + F P+ SL + + EN NSK L I+++
Sbjct: 327 VSRLWTYETGILNDVLLPEDIPEDIPFRDSFGPDYSLYPMLDDLYENKNSKKLLEDIRIR 386
Query: 363 VLENLRSIQHAPSVQM-QEVPPDFYIPEFDEDEQNPDERMDQHTQDKQIQRDDEF 416
LEN+R +Q APSV+M E P I E+E + M++ T+ R +E
Sbjct: 387 CLENIRYLQGAPSVRMDAECIPTQDISALTEEEDKIIQEMNEETEADSSNRLEEM 441
>sp|Q09440|HDA2_CAEEL Putative histone deacetylase 2 OS=Caenorhabditis elegans GN=hda-2
PE=3 SV=1
Length = 507
Score = 409 bits (1051), Expect = e-113, Method: Compositional matrix adjust.
Identities = 204/407 (50%), Positives = 280/407 (68%), Gaps = 10/407 (2%)
Query: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
K ++Y+Y DVG ++G HPMKP RL + + LV+SY++ K M + K +++ F
Sbjct: 28 KRNVAYYYHKDVGHFHYGQLHPMKPQRLVVCNDLVVSYEMPKYMTVVESPKLDAADISVF 87
Query: 64 HSADYVEFLHRITPDTQHLFRQE-LTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNN 122
H+ DYV FL +TP + L ++N+GEDCP+F L+++C +YAGG+++ ARRLN+
Sbjct: 88 HTEDYVNFLQTVTPKLGLTMPDDVLRQFNIGEDCPIFAGLWDYCTLYAGGSVEGARRLNH 147
Query: 123 QLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEA 182
++ DI INW GGLHHAKK EASGFCY+ND+VLGILELLKYH RVLYIDID+HHGDGV+EA
Sbjct: 148 KMNDIVINWPGGLHHAKKSEASGFCYVNDIVLGILELLKYHKRVLYIDIDIHHGDGVQEA 207
Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
F +DRVMTVSFH+FG +FPG+G + + G GK++AINVPL I D + +LF+++I
Sbjct: 208 FNNSDRVMTVSFHRFGQ-YFPGSGSIMDKGVGPGKYFAINVPLMAAIRDEPYLKLFESVI 266
Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTK 302
S V E + P AIVLQCG+DSL DRLG F LS + HA V++VK PL+V GGGGYT
Sbjct: 267 SGVEENFNPEAIVLQCGSDSLCEDRLGQFALSFNAHARAVKYVKSLGKPLMVLGGGGYTL 326
Query: 303 ENVARCWTVETGILLDTELPNEIPENE-YIKYFAPECSLRIPN--GHIENLNSKSYLSTI 359
NVARCW +ETG++L + +EIP Y YF P L PN + + NS +YL++I
Sbjct: 327 RNVARCWALETGVILGLRMDDEIPGTSLYSHYFTPR--LLRPNLVPKMNDANSAAYLASI 384
Query: 360 KMQVLENLRSIQHAPSVQMQEVPPDFYIPEFDEDEQNPDERMDQHTQ 406
+ + L LR I+ APSVQMQ + + E ++ E+N ER+ + ++
Sbjct: 385 EKETLACLRMIRGAPSVQMQNI-VGIRLDEIEQIEEN--ERLQKSSK 428
>sp|Q9FH09|HDA7_ARATH Histone deacetylase 7 OS=Arabidopsis thaliana GN=HDA7 PE=2 SV=1
Length = 409
Score = 404 bits (1037), Expect = e-112, Method: Compositional matrix adjust.
Identities = 198/385 (51%), Positives = 265/385 (68%), Gaps = 11/385 (2%)
Query: 4 KDKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQF 63
K ++SYFY+ +G Y+G N P KP R+ +TH+L+LSY+LH+ MEI P A + +F
Sbjct: 9 KRRVSYFYEPMIGDYYYGVNQPTKPQRIRVTHNLILSYNLHRHMEINHPDLADASDFEKF 68
Query: 64 HSADYVEFLHRITPDT----QHLFRQELTKYNLGEDC--PVFENLFEFCQIYAGGTIDAA 117
HS +Y+ FL +TP+T + L ++N+ D PVF NLF++C+ YAGG+I AA
Sbjct: 69 HSLEYINFLKSVTPETVTDPHPSVSENLKRFNVDVDWDGPVFHNLFDYCRAYAGGSISAA 128
Query: 118 RRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGD 177
+LN Q DIAINWAGG+HH KK +ASGF Y+ND+VL ILELLK RVLYI+I HGD
Sbjct: 129 AKLNRQEADIAINWAGGMHHVKKDKASGFGYVNDVVLAILELLKSFKRVLYIEIGFPHGD 188
Query: 178 GVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRL 237
VEEAF TDRVMTVSFHK GD TGD+ + GE +G++Y++N PLKDG+DD S L
Sbjct: 189 EVEEAFKDTDRVMTVSFHKVGD-----TGDISDYGEGKGQYYSLNAPLKDGLDDFSLRGL 243
Query: 238 FKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLPLLVTGG 297
F +I + +E Y P IVLQCGADSLAGD G FNLSI GH +C+++V+ FN+PL++ GG
Sbjct: 244 FIPVIHRAMEIYEPEVIVLQCGADSLAGDPFGTFNLSIKGHGDCLQYVRSFNVPLMILGG 303
Query: 298 GGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYLS 357
GGYT NVARCW ET I + +L N++P N+Y+KYF P+ L I + +NLN++ +
Sbjct: 304 GGYTLPNVARCWCYETAIAVGEQLDNDLPGNDYMKYFRPDYKLHILPTNRQNLNTRLDII 363
Query: 358 TIKMQVLENLRSIQHAPSVQMQEVP 382
T++ +L L + HAPSV Q+ P
Sbjct: 364 TMRETLLAQLSLVMHAPSVPFQDTP 388
>sp|Q9BY41|HDAC8_HUMAN Histone deacetylase 8 OS=Homo sapiens GN=HDAC8 PE=1 SV=2
Length = 377
Score = 314 bits (804), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 148/345 (42%), Positives = 223/345 (64%), Gaps = 5/345 (1%)
Query: 28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITP--DTQHLFRQ 85
P R M H L+ +Y LHK+M I +P A E+A FH+ Y++ L +++ D H
Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDDDH---P 91
Query: 86 ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
+ +Y LG DCP E +F++ G TI AA+ L + +C +AINW+GG HHAKK EASG
Sbjct: 92 DSIEYGLGYDCPATEGIFDYAAAIGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASG 151
Query: 146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
FCY+ND VLGIL L + R+LY+D+D+HHGDGVE+AF FT +VMTVS HKF FFPGT
Sbjct: 152 FCYLNDAVLGILRLRRKFERILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGT 211
Query: 206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
GDV ++G +G++Y++NVP++DGI D + ++ ++++ +V + + P A+VLQ GAD++AG
Sbjct: 212 GDVSDVGLGKGRYYSVNVPIQDGIQDEKYYQICESVLKEVYQAFNPKAVVLQLGADTIAG 271
Query: 266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI 325
D + FN++ G +C++++ ++ L L+ GGGGY N ARCWT TG++L L +EI
Sbjct: 272 DPMCSFNMTPVGIGKCLKYILQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEI 331
Query: 326 PENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSI 370
P++E+ + P+ L I + N + I + NL+ +
Sbjct: 332 PDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHV 376
>sp|B1WC68|HDAC8_RAT Histone deacetylase 8 OS=Rattus norvegicus GN=Hdac8 PE=2 SV=1
Length = 377
Score = 312 bits (799), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 149/345 (43%), Positives = 222/345 (64%), Gaps = 5/345 (1%)
Query: 28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITP--DTQHLFRQ 85
P R M H L+ +Y LHK+M I +P A E+A FH+ Y++ L +++ D H
Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDEDH---P 91
Query: 86 ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
+ +Y LG DCP E +F++ GGTI AA+ L + C +AINW+GG HHAKK EASG
Sbjct: 92 DSIEYGLGYDCPATEGIFDYAAAIGGGTITAAQCLIDGKCKVAINWSGGWHHAKKDEASG 151
Query: 146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
FCY+ND VLGIL L + R+LY+D+D+HHGDGVE+AF FT +VMTVS HKF FFPGT
Sbjct: 152 FCYLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGT 211
Query: 206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
GD+ ++G +G++Y++NVP++DGI D + + ++++ +V + + P A+VLQ GAD++AG
Sbjct: 212 GDMSDVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYQAFNPKAVVLQLGADTIAG 271
Query: 266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI 325
D + FN++ G +C+++V ++ L L+ GGGGY N ARCWT TG++L L +EI
Sbjct: 272 DPMCSFNMTPVGIGKCLKYVLQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEI 331
Query: 326 PENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSI 370
P++E+ + P+ L I + N + I + NL+ +
Sbjct: 332 PDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHV 376
>sp|Q8VH37|HDAC8_MOUSE Histone deacetylase 8 OS=Mus musculus GN=Hdac8 PE=1 SV=2
Length = 377
Score = 312 bits (799), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 149/345 (43%), Positives = 222/345 (64%), Gaps = 5/345 (1%)
Query: 28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITP--DTQHLFRQ 85
P R M H L+ +Y LHK+M I +P A E+A FH+ Y++ L +++ D H
Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMATFHTDAYLQHLQKVSQEGDEDH---P 91
Query: 86 ELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASG 145
+ +Y LG DCP E +F++ GGTI AA+ L + C +AINW+GG HHAKK EASG
Sbjct: 92 DSIEYGLGYDCPATEGIFDYAAAIGGGTITAAQCLIDGKCKVAINWSGGWHHAKKDEASG 151
Query: 146 FCYINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGT 205
FCY+ND VLGIL L + R+LY+D+D+HHGDGVE+AF FT +VMTVS HKF FFPGT
Sbjct: 152 FCYLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGT 211
Query: 206 GDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAG 265
GD+ ++G +G++Y++NVP++DGI D + + ++++ +V + + P A+VLQ GAD++AG
Sbjct: 212 GDMSDVGLGKGRYYSVNVPIQDGIQDEKYYHICESVLKEVYQAFNPKAVVLQLGADTIAG 271
Query: 266 DRLGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI 325
D + FN++ G +C+++V ++ L L+ GGGGY N ARCWT TG++L L +EI
Sbjct: 272 DPMCSFNMTPVGIGKCLKYVLQWQLATLILGGGGYNLANTARCWTYLTGVILGKTLSSEI 331
Query: 326 PENEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSI 370
P++E+ + P+ L I + N + I + NL+ +
Sbjct: 332 PDHEFFTAYGPDYVLEITPSCRPDRNEPHRIQQILNYIKGNLKHV 376
>sp|Q0VCB2|HDAC8_BOVIN Histone deacetylase 8 OS=Bos taurus GN=HDAC8 PE=2 SV=1
Length = 377
Score = 308 bits (789), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 146/343 (42%), Positives = 219/343 (63%), Gaps = 1/343 (0%)
Query: 28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQEL 87
P R M H L+ +Y LHK+M I +P A E+A FH+ Y++ L +++ D +
Sbjct: 35 PKRASMVHSLIEAYALHKQMRIVKPKVASMEEMASFHTDAYLQHLQKVSEDGDDDHPDSI 94
Query: 88 TKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFC 147
+Y LG DCP E +F++ G TI AA+ L + +C +AINW+GG HHAKK EASGFC
Sbjct: 95 -EYGLGYDCPATEGIFDYAAAVGGATITAAQCLIDGMCKVAINWSGGWHHAKKDEASGFC 153
Query: 148 YINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGD 207
Y+ND VLGIL L + R+LY+D+D+HHGDGVE+AF FT +VMTVS HKF FFPGTGD
Sbjct: 154 YLNDAVLGILRLRRKFDRILYVDLDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGD 213
Query: 208 VKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR 267
V ++G +G++Y++NVP++D I D + + ++++ +V + P A+VLQ GAD++AGD
Sbjct: 214 VSDVGLGKGRYYSVNVPIQDCIQDERYYHICESVLKEVYIAFNPKAVVLQLGADTIAGDP 273
Query: 268 LGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPE 327
+ FN++ G +C++++ ++ L L+ GGGGY N ARCWT TG++L L +EIP+
Sbjct: 274 MCSFNMTPVGIGKCLKYILQWELATLILGGGGYNLANTARCWTYLTGVILGKTLSSEIPD 333
Query: 328 NEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSI 370
+E+ + P+ L I + N + I + NL+ +
Sbjct: 334 HEFFTAYGPDYVLEITPSCRPDRNEPHRVQQILNYIKGNLKHV 376
>sp|Q7SXM0|HDAC8_DANRE Histone deacetylase 8 OS=Danio rerio GN=hdac8 PE=2 SV=1
Length = 378
Score = 308 bits (789), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 153/343 (44%), Positives = 223/343 (65%), Gaps = 1/343 (0%)
Query: 28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQEL 87
P+R M H L+ +Y L K M + +PH A E+A FH+ Y++ LH+I+ D + Q
Sbjct: 36 PNRASMVHSLIEAYGLLKYMRVVKPHVASIEEMAVFHTDSYLQHLHKISQDGDNDDPQS- 94
Query: 88 TKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFC 147
+ LG DCPV E +F++ G T+ AA+ L + CD+AINWAGG HHAKK EASG C
Sbjct: 95 ADFGLGYDCPVVEGIFDYAAAVGGATLTAAQNLLDGKCDVAINWAGGWHHAKKDEASGSC 154
Query: 148 YINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGD 207
Y+ND VLGIL+L + + RVLY+D+D+HHGDGVE+AF FT +VMTVS HKF FFPGTGD
Sbjct: 155 YVNDAVLGILKLREKYDRVLYVDVDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGD 214
Query: 208 VKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR 267
V + G +G++YA+NVP +DG+ D + + F +++ +V + P A+V+Q GAD++AGD
Sbjct: 215 VTDTGLGKGRWYAVNVPFEDGVRDDRYCQTFTSVMQEVKALFNPEAVVMQLGADTMAGDP 274
Query: 268 LGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPE 327
+ FN++ G A+C+ ++ + LP L+ GGGGY N ARCWT TG +L L +EIP+
Sbjct: 275 MCSFNMTPVGVAKCLTYILGWELPTLLLGGGGYNLANTARCWTYLTGTVLGQTLSSEIPD 334
Query: 328 NEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSI 370
+E+ + P+ SL I + N +L + + NL+++
Sbjct: 335 HEFFTEYGPDYSLEISPSCRPDRNESQHLERVISTIKGNLKNV 377
>sp|B1H369|HDAC8_XENTR Histone deacetylase 8 OS=Xenopus tropicalis GN=hdac8 PE=2 SV=1
Length = 369
Score = 307 bits (786), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 146/343 (42%), Positives = 220/343 (64%), Gaps = 1/343 (0%)
Query: 28 PHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQEL 87
P R M H L+ +Y L K+M + +P A E+A FH+ Y++ LH+++ + + E
Sbjct: 27 PRRASMVHSLIEAYGLLKEMRVVKPKVASMEEMAAFHTDSYLQHLHKVSEEGDN-DDPET 85
Query: 88 TKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFC 147
+Y LG DCP+ E ++++ G T+ AA +L IAINW GG HHAKK EASGFC
Sbjct: 86 LEYGLGYDCPITEGIYDYAAAVGGATLTAAEQLMAGKTRIAINWPGGWHHAKKDEASGFC 145
Query: 148 YINDLVLGILELLKYHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGD 207
Y+ND VLGIL+L + RVLY+D+D+HHGDGVE+AF FT +VMTVS HKF FFPGTGD
Sbjct: 146 YLNDAVLGILKLREKFDRVLYVDMDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGD 205
Query: 208 VKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDR 267
V +IG +G++Y++NVPL+DGI D + ++ + ++ +V T+ P A+VLQ GAD++AGD
Sbjct: 206 VSDIGLGKGRYYSVNVPLQDGIQDEKYYQICEGVLKEVFTTFNPEAVVLQLGADTIAGDP 265
Query: 268 LGCFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPE 327
+ FN++ G +C+++V ++ LP L+ GGGGY N ARCWT T +++ L +EIP+
Sbjct: 266 MCSFNMTPQGIGKCLKYVLQWQLPTLILGGGGYHLPNTARCWTYLTALIVGRTLSSEIPD 325
Query: 328 NEYIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSI 370
+E+ + P+ L + + N + I + +L+ +
Sbjct: 326 HEFFTEYGPDYVLEVTPSCRPDRNDSQKVQEILQSIKGHLKQV 368
>sp|Q6GPA7|HDAC8_XENLA Histone deacetylase 8 OS=Xenopus laevis GN=hdac8 PE=2 SV=1
Length = 325
Score = 290 bits (743), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 139/322 (43%), Positives = 209/322 (64%), Gaps = 1/322 (0%)
Query: 49 IYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFRQELTKYNLGEDCPVFENLFEFCQI 108
+ +P A E+A FH+ Y++ LH+++ + + E +Y LG DCP+ E ++++
Sbjct: 4 VVKPKVASMEEMAAFHTDAYLQHLHKVSEEGDN-DDPETLEYGLGYDCPITEGIYDYAAA 62
Query: 109 YAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLY 168
G T+ AA +L IA+NW GG HHAKK EASGFCY+ND VLGIL+L + RVLY
Sbjct: 63 VGGATLTAAEQLIEGKTRIAVNWPGGWHHAKKDEASGFCYLNDAVLGILKLREKFDRVLY 122
Query: 169 IDIDVHHGDGVEEAFYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDG 228
+D+D+HHGDGVE+AF FT +VMTVS HKF FFPGTGDV +IG +G++Y+INVPL+DG
Sbjct: 123 VDMDLHHGDGVEDAFSFTSKVMTVSLHKFSPGFFPGTGDVSDIGLGKGRYYSINVPLQDG 182
Query: 229 IDDTSFTRLFKTIISKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF 288
I D + ++ + ++ +V T+ P A+VLQ GAD++AGD + FN++ +G +C+++V ++
Sbjct: 183 IQDDKYYQICEGVLKEVFTTFNPEAVVLQLGADTIAGDPMCSFNMTPEGIGKCLKYVLQW 242
Query: 289 NLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIE 348
LP L+ GGGGY N ARCWT T +++ L +EIP++E+ + P+ L I
Sbjct: 243 QLPTLILGGGGYHLPNTARCWTYLTALIVGRTLSSEIPDHEFFTEYGPDYVLEITPSCRP 302
Query: 349 NLNSKSYLSTIKMQVLENLRSI 370
+ N + I + NL+ +
Sbjct: 303 DRNDTQKVQEILQSIKGNLKRV 324
>sp|Q9LXN8|HDA17_ARATH Histone deacetylase 17 OS=Arabidopsis thaliana GN=HDA17 PE=2 SV=1
Length = 158
Score = 277 bits (708), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 127/155 (81%), Positives = 145/155 (93%)
Query: 270 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 329
F++ GHAECV+FVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEI EN+
Sbjct: 2 AFSMLFTGHAECVKFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEISEND 61
Query: 330 YIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPE 389
YIKYFAP+ SL+IP GHIENLN+KSY+S+IK+Q+LENLR IQHAPSVQMQEVPPDFYIP+
Sbjct: 62 YIKYFAPDFSLKIPGGHIENLNTKSYISSIKVQILENLRYIQHAPSVQMQEVPPDFYIPD 121
Query: 390 FDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 424
FDEDEQNPD R+DQ ++DKQIQRDDE+++GDNDND
Sbjct: 122 FDEDEQNPDVRVDQRSRDKQIQRDDEYFDGDNDND 156
>sp|Q9M1N8|HDA10_ARATH Putative histone deacetylase 10 OS=Arabidopsis thaliana GN=HDA10
PE=3 SV=1
Length = 142
Score = 237 bits (605), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 113/155 (72%), Positives = 130/155 (83%), Gaps = 16/155 (10%)
Query: 270 CFNLSIDGHAECVRFVKKFNLPLLVTGGGGYTKENVARCWTVETGILLDTELPNEIPENE 329
F++ GHAEC GGYTKENVARCWTVETGILLDTELPNEIPEN+
Sbjct: 2 AFSMLFTGHAEC----------------GGYTKENVARCWTVETGILLDTELPNEIPEND 45
Query: 330 YIKYFAPECSLRIPNGHIENLNSKSYLSTIKMQVLENLRSIQHAPSVQMQEVPPDFYIPE 389
YIKYFAP+ SL+IP GHIENLN+KSY+S+IK+Q+LENLR IQHAPSVQMQEVPPDFYIP+
Sbjct: 46 YIKYFAPDFSLKIPGGHIENLNTKSYISSIKVQILENLRYIQHAPSVQMQEVPPDFYIPD 105
Query: 390 FDEDEQNPDERMDQHTQDKQIQRDDEFYEGDNDND 424
FDEDEQNPD R+DQ ++DKQIQRDDE+++GDNDND
Sbjct: 106 FDEDEQNPDVRVDQRSRDKQIQRDDEYFDGDNDND 140
>sp|Q12214|HOS1_YEAST Histone deacetylase HOS1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=HOS1 PE=1 SV=1
Length = 470
Score = 174 bits (442), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 93/241 (38%), Positives = 140/241 (58%), Gaps = 8/241 (3%)
Query: 77 PDTQHLFRQELTKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLH 136
P ++ E +YNL DCP+F L +CQ+ G T++ L+ I INW GG H
Sbjct: 151 PTDTYILNSETKQYNLEGDCPIFSYLPMYCQVITGATLNLLDHLSPTERLIGINWDGGRH 210
Query: 137 HAKKCEASGFCYINDLVLGILELLKYHA-RVLYIDIDVHHGDGVEEAFYFTDRVMTVSFH 195
HA K ASGFCYIND+VL I L K ++ Y+D D+HHGDGVE+AF ++ ++ T+S H
Sbjct: 211 HAFKQRASGFCYINDVVLLIQRLRKAKLNKITYVDFDLHHGDGVEKAFQYSKQIQTISVH 270
Query: 196 KFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVVETYAPGAIV 255
+ FFPGTG + + R+ K +N+PLK G DD + I++ ++E + P A++
Sbjct: 271 LYEPGFFPGTGSLSD--SRKDK-NVVNIPLKHGCDDNYLELIASKIVNPLIERHEPEALI 327
Query: 256 LQCGADSLAGDRLGCFNLSIDGHAECVRFVKKFNLP---LLVTGGGGYTKENVARCWTVE 312
++CG D L GDR + L+I G + + + K + P + + GGGGY ++R +T
Sbjct: 328 IECGGDGLLGDRFNEWQLTIRGLSRIIINIMK-SYPRAHIFLLGGGGYNDLLMSRFYTYL 386
Query: 313 T 313
T
Sbjct: 387 T 387
>sp|P39067|ACUC_BACSU Acetoin utilization protein AcuC OS=Bacillus subtilis (strain 168)
GN=acuC PE=3 SV=1
Length = 387
Score = 172 bits (435), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 115/348 (33%), Positives = 165/348 (47%), Gaps = 19/348 (5%)
Query: 9 YFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFHSADY 68
+ Y + F HP R+ +T+ L+ + + +I P A EL+ H+ DY
Sbjct: 6 FIYSPSYQTYMFHQEHPFNQQRVLLTYDLLKTINAFDDGDIVTPRLASEEELSLVHTDDY 65
Query: 69 VEFLHRITPDTQHLFRQELTKYNLG-EDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDI 127
++ + L +E Y LG ED PVF + E + GGT+ AA + +
Sbjct: 66 IQAVK--LAGAGKLPAEEGESYGLGTEDTPVFAGMHEAASLLVGGTLTAADWVMSGQALH 123
Query: 128 AINWAGGLHHAKKCEASGFCYINDLVLGILELLK-YHARVLYIDIDVHHGDGVEEAFYFT 186
A N GGLHH + ASGFC ND + I + K Y ARVLYID D HHGDGV+ FY
Sbjct: 124 AANLGGGLHHGFRGRASGFCIYNDSAVAIQYIQKKYSARVLYIDTDAHHGDGVQFTFYDN 183
Query: 187 DRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIISKVV 246
V T+S H+ G FPGTG ++E G +G Y+ N+PL +D SF ++T S+V
Sbjct: 184 PDVCTLSIHETGRYLFPGTGQIQEKGSGKGYGYSFNIPLDAFTEDDSFLEAYRTAASEVA 243
Query: 247 ETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF-----NLPLLVTGGGGYT 301
+ P I+ Q GAD+ D L + +I+ + E R + GGGGY
Sbjct: 244 AYFEPDVIISQNGADAHYYDPLTHLSATINIYEEIPRLAHTLAHQYCGGKWIAVGGGGYD 303
Query: 302 KENV-----ARCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPN 344
V AR W GI E+P E+I + +C + +P+
Sbjct: 304 IWRVVPRAWARIWLEMKGIDPGHEIP-----PEWIVKWQKQCPVALPS 346
>sp|Q6GFX3|ACUC_STAAR Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
MRSA252) GN=acuC PE=3 SV=1
Length = 389
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 117/379 (30%), Positives = 172/379 (45%), Gaps = 10/379 (2%)
Query: 5 DKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFH 64
K +Y Y + F HP RL +T L+L+ +L +I +P A EL H
Sbjct: 6 SKTAYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIH 65
Query: 65 SADYVEFLHRITPDTQHLFRQELTKYNLG-EDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
DYVE + + + E KY L E+ F+++ GG + A + +
Sbjct: 66 KYDYVEAIKHASHGI--ISEDEAMKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMSG 123
Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLK-YHARVLYIDIDVHHGDGVEEA 182
+ GGLHHA+ ASGFC ND+ + L K Y+ RVL ID D HHGDG + +
Sbjct: 124 KALNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAHHGDGTQWS 183
Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
FY + V T S H+ G FPG+G E GE G + +NVPL+ +D+SF FK +
Sbjct: 184 FYADNHVTTYSIHETGKFLFPGSGHYTERGEDIGYGHTVNVPLEPYTEDSSFLECFKLTV 243
Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF-----NLPLLVTGG 297
VV+++ P I+ G D D L N ++ E FVK N +++ GG
Sbjct: 244 EPVVKSFKPDIILSVNGVDIHYRDPLTHLNCTLHSLYEIPYFVKYLADTYTNGKIIMFGG 303
Query: 298 GGYTKENVA-RCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYL 356
GGY V R W+ L+D + + E+I + S +P + LN +Y+
Sbjct: 304 GGYNIWRVVPRAWSHVFLSLIDQPIQSGYLPLEWINKWKHYSSELLPKRWEDRLNDYTYV 363
Query: 357 STIKMQVLENLRSIQHAPS 375
K +N + H S
Sbjct: 364 PRTKEISEKNKKLALHIAS 382
>sp|Q8NW34|ACUC_STAAW Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
MW2) GN=acuC PE=3 SV=1
Length = 389
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/379 (30%), Positives = 171/379 (45%), Gaps = 10/379 (2%)
Query: 5 DKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFH 64
K +Y Y + F HP RL +T L+L+ +L +I +P A EL H
Sbjct: 6 SKTAYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIH 65
Query: 65 SADYVEFLHRITPDTQHLFRQELTKYNLG-EDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
DYVE + + + E KY L E+ F+++ GG + A + +
Sbjct: 66 KYDYVEAIKHASHGI--ISEDEAKKYGLNDEENSQFKHMHRHSATIVGGALTLADLIMSG 123
Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLK-YHARVLYIDIDVHHGDGVEEA 182
+ GGLHHA+ ASGFC ND+ + L K Y+ RVL ID D HHGDG + +
Sbjct: 124 KVLNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAHHGDGTQWS 183
Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
FY + V T S H+ G FPG+G E GE G + +NVPL+ +D SF FK +
Sbjct: 184 FYADNHVTTYSIHETGKFLFPGSGHYTERGEDIGYGHTVNVPLEPYTEDASFLECFKLTV 243
Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF-----NLPLLVTGG 297
VV+++ P I+ G D D L N ++ E FVK N +++ GG
Sbjct: 244 EPVVKSFKPDIILSVNGVDIHYRDPLTHLNCTLHSLYEIPYFVKYLADSYTNGKVIMFGG 303
Query: 298 GGYTKENVA-RCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYL 356
GGY V R W+ L+D + + E+I + S +P + LN +Y+
Sbjct: 304 GGYNIWRVVPRAWSHVFLSLIDQPIQSGYLPLEWINKWKHYSSELLPKRWEDRLNDYTYV 363
Query: 357 STIKMQVLENLRSIQHAPS 375
K +N + H S
Sbjct: 364 PRTKEISEKNKKLALHIAS 382
>sp|Q6G8J2|ACUC_STAAS Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
MSSA476) GN=acuC PE=3 SV=1
Length = 389
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 117/379 (30%), Positives = 171/379 (45%), Gaps = 10/379 (2%)
Query: 5 DKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFH 64
K +Y Y + F HP RL +T L+L+ +L +I +P A EL H
Sbjct: 6 SKTAYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIH 65
Query: 65 SADYVEFLHRITPDTQHLFRQELTKYNLG-EDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
DYVE + + + E KY L E+ F+++ GG + A + +
Sbjct: 66 KYDYVEAIKHASHGI--ISEDEAKKYGLNDEENSQFKHMHRHSATIVGGALTLADLIMSG 123
Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLK-YHARVLYIDIDVHHGDGVEEA 182
+ GGLHHA+ ASGFC ND+ + L K Y+ RVL ID D HHGDG + +
Sbjct: 124 KVLNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAHHGDGTQWS 183
Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
FY + V T S H+ G FPG+G E GE G + +NVPL+ +D SF FK +
Sbjct: 184 FYADNHVTTYSIHETGKFLFPGSGHYTERGEDIGYGHTVNVPLEPYTEDASFLECFKLTV 243
Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF-----NLPLLVTGG 297
VV+++ P I+ G D D L N ++ E FVK N +++ GG
Sbjct: 244 EPVVKSFKPDIILSVNGVDIHYRDPLTHLNCTLHSLYEIPYFVKYLADSYTNGKVIMFGG 303
Query: 298 GGYTKENVA-RCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYL 356
GGY V R W+ L+D + + E+I + S +P + LN +Y+
Sbjct: 304 GGYNIWRVVPRAWSHVFLSLIDQPIQSGYLPLEWINKWKHYSSELLPKRWEDRLNDYTYV 363
Query: 357 STIKMQVLENLRSIQHAPS 375
K +N + H S
Sbjct: 364 PRTKEISEKNKKLALHIAS 382
>sp|Q5HF39|ACUC_STAAC Acetoin utilization protein AcuC OS=Staphylococcus aureus (strain
COL) GN=acuC PE=3 SV=1
Length = 389
Score = 155 bits (393), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 117/379 (30%), Positives = 171/379 (45%), Gaps = 10/379 (2%)
Query: 5 DKISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYDLHKKMEIYRPHKAYPVELAQFH 64
K +Y Y + F HP RL +T L+L+ +L +I +P A EL H
Sbjct: 6 SKTAYVYSDKLLQYRFHDQHPFNQMRLKLTTELLLNANLLSPEQIVQPRIATDDELMLIH 65
Query: 65 SADYVEFLHRITPDTQHLFRQELTKYNLG-EDCPVFENLFEFCQIYAGGTIDAARRLNNQ 123
DYVE + + + E KY L E+ F+++ GG + A + +
Sbjct: 66 KYDYVEAIKHASHGI--ISEDEAKKYGLNDEENGQFKHMHRHSATIVGGALTLADLIMSG 123
Query: 124 LCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLK-YHARVLYIDIDVHHGDGVEEA 182
+ GGLHHA+ ASGFC ND+ + L K Y+ RVL ID D HHGDG + +
Sbjct: 124 KVLNGCHLGGGLHHAQPGRASGFCIYNDIAITAQYLAKEYNQRVLIIDTDAHHGDGTQWS 183
Query: 183 FYFTDRVMTVSFHKFGDLFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTII 242
FY + V T S H+ G FPG+G E GE G + +NVPL+ +D SF FK +
Sbjct: 184 FYADNHVTTYSIHETGKFLFPGSGHYTERGEDIGYGHTVNVPLEPYTEDASFLECFKLTV 243
Query: 243 SKVVETYAPGAIVLQCGADSLAGDRLGCFNLSIDGHAECVRFVKKF-----NLPLLVTGG 297
VV+++ P I+ G D D L N ++ E FVK N +++ GG
Sbjct: 244 EPVVKSFKPDIILSVNGVDIHYRDPLTHLNCTLHSLYEIPYFVKYLADSYTNGKVIMFGG 303
Query: 298 GGYTKENVA-RCWTVETGILLDTELPNEIPENEYIKYFAPECSLRIPNGHIENLNSKSYL 356
GGY V R W+ L+D + + E+I + S +P + LN +Y+
Sbjct: 304 GGYNIWRVVPRAWSHVFLSLIDQPIQSGYLPLEWINKWKHYSSELLPKRWEDRLNDYTYV 363
Query: 357 STIKMQVLENLRSIQHAPS 375
K +N + H S
Sbjct: 364 PRTKEISEKNKKLALHIAS 382
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.141 0.437
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 178,791,487
Number of Sequences: 539616
Number of extensions: 8125547
Number of successful extensions: 21146
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 103
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 20721
Number of HSP's gapped (non-prelim): 228
length of query: 429
length of database: 191,569,459
effective HSP length: 120
effective length of query: 309
effective length of database: 126,815,539
effective search space: 39186001551
effective search space used: 39186001551
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)