Query 014169
Match_columns 429
No_of_seqs 314 out of 2367
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 06:43:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014169.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014169hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qfs_A CPR, P450R, NADPH--cyto 100.0 6.6E-90 2.3E-94 705.1 46.8 418 5-429 37-457 (458)
2 2qtl_A MSR;, methionine syntha 100.0 9.4E-84 3.2E-88 672.9 47.7 409 19-429 104-538 (539)
3 3qe2_A CPR, P450R, NADPH--cyto 100.0 6.5E-84 2.2E-88 686.2 46.9 402 20-429 213-617 (618)
4 4dql_A Bifunctional P-450/NADP 100.0 7E-83 2.4E-87 644.2 42.0 385 26-429 3-391 (393)
5 1f20_A Nitric-oxide synthase; 100.0 1.1E-80 3.6E-85 636.8 43.5 397 22-429 23-433 (435)
6 2bpo_A CPR, P450R, NADPH-cytoc 100.0 5.4E-81 1.8E-85 670.5 39.1 398 20-429 250-682 (682)
7 1ddg_A Sulfite reductase (NADP 100.0 6.9E-80 2.4E-84 619.2 42.1 370 20-429 2-374 (374)
8 1tll_A Nitric-oxide synthase, 100.0 5.7E-75 1.9E-79 623.9 42.0 395 24-429 246-654 (688)
9 1fnb_A Ferredoxin-NADP+ reduct 100.0 1.3E-41 4.4E-46 334.1 29.0 276 20-429 28-314 (314)
10 2bmw_A Ferredoxin--NADP reduct 100.0 1.6E-41 5.4E-46 331.8 29.5 277 20-429 12-304 (304)
11 3vo2_A Putative uncharacterize 100.0 2.3E-40 7.7E-45 324.7 30.0 276 20-429 24-310 (310)
12 2b5o_A FNR, ferredoxin--NADP r 100.0 7.5E-40 2.6E-44 331.9 29.8 274 23-429 116-402 (402)
13 2rc5_A Ferredoxin-NADP reducta 100.0 9.1E-39 3.1E-43 313.7 28.4 282 20-429 12-314 (314)
14 3lo8_A Ferredoxin--NADP reduct 100.0 2.5E-38 8.7E-43 310.1 20.4 229 189-429 59-311 (311)
15 3jqq_A Ferredoxin NADP reducta 100.0 1.6E-37 5.6E-42 305.2 26.0 294 20-429 6-316 (316)
16 1tvc_A Methane monooxygenase c 100.0 1.9E-29 6.6E-34 239.2 16.6 186 189-400 42-233 (250)
17 1qfj_A Protein (flavin reducta 100.0 2.8E-29 9.5E-34 235.3 12.9 183 189-399 28-217 (232)
18 2eix_A NADH-cytochrome B5 redu 100.0 2.1E-29 7.1E-34 237.8 10.8 187 190-400 41-234 (243)
19 2r6h_A NADH:ubiquinone oxidore 100.0 6.2E-29 2.1E-33 240.6 14.4 196 190-400 38-278 (290)
20 1fdr_A Flavodoxin reductase; f 100.0 5.6E-29 1.9E-33 235.5 12.6 190 189-401 29-231 (248)
21 1umk_A B5R, NADH-cytochrome B5 100.0 2.6E-29 8.9E-34 241.6 8.2 196 190-400 46-266 (275)
22 1krh_A Benzoate 1,2-dioxygenas 100.0 2.1E-28 7.1E-33 242.3 13.3 183 189-400 137-324 (338)
23 4eh1_A Flavohemoprotein; struc 100.0 3.1E-28 1E-32 229.6 12.5 185 189-401 32-225 (243)
24 1gvh_A Flavohemoprotein; oxido 99.9 6.3E-28 2.2E-32 243.9 13.3 182 190-400 182-379 (396)
25 4fk8_A Ferredoxin--NADP reduct 99.9 7.6E-29 2.6E-33 237.9 6.2 205 189-429 45-268 (271)
26 2bgi_A Ferredoxin-NADP(H) redu 99.9 5.4E-28 1.8E-32 232.3 10.4 188 190-400 43-249 (272)
27 4g1v_A Flavohemoglobin; three 99.9 1.9E-27 6.3E-32 240.8 13.3 185 190-400 183-379 (399)
28 2cnd_A NADH-dependent nitrate 99.9 9.1E-28 3.1E-32 230.1 9.1 195 190-399 42-259 (270)
29 1ep3_B Dihydroorotate dehydrog 99.9 1.6E-27 5.6E-32 227.7 9.5 173 190-399 33-212 (262)
30 1cqx_A Flavohemoprotein; globi 99.9 4.8E-27 1.6E-31 238.0 13.0 186 190-400 184-385 (403)
31 2qdx_A Ferredoxin reductase; o 99.9 5.8E-28 2E-32 229.9 5.8 189 189-400 29-235 (257)
32 2pia_A Phthalate dioxygenase r 99.9 1.7E-26 6E-31 227.1 9.7 174 190-398 38-214 (321)
33 2gpj_A Siderophore-interacting 99.8 9.5E-22 3.2E-26 186.7 6.7 169 191-400 39-215 (252)
34 3lrx_A Putative hydrogenase; a 99.8 4.6E-20 1.6E-24 162.7 6.5 128 250-401 1-137 (158)
35 3lyu_A Putative hydrogenase; t 99.8 1.1E-18 3.7E-23 151.2 9.0 122 262-401 3-132 (142)
36 3a1f_A Cytochrome B-245 heavy 99.8 5.2E-19 1.8E-23 159.0 6.7 137 263-401 2-171 (186)
37 3lo8_A Ferredoxin--NADP reduct 89.6 0.93 3.2E-05 42.9 8.2 54 21-75 20-73 (311)
38 1tvc_A Methane monooxygenase c 60.7 10 0.00036 34.1 5.3 48 23-75 4-56 (250)
39 2r6h_A NADH:ubiquinone oxidore 54.2 24 0.00081 32.4 6.7 42 29-75 9-51 (290)
40 1umk_A B5R, NADH-cytochrome B5 51.9 37 0.0013 30.8 7.6 45 25-74 12-58 (275)
41 1ep3_B Dihydroorotate dehydrog 50.1 22 0.00075 32.3 5.6 42 30-76 6-47 (262)
42 1qfj_A Protein (flavin reducta 48.6 31 0.0011 30.4 6.3 40 30-75 3-42 (232)
43 2eix_A NADH-cytochrome B5 redu 48.1 47 0.0016 29.4 7.5 44 26-74 8-53 (243)
44 2cnd_A NADH-dependent nitrate 47.4 34 0.0012 30.9 6.5 45 25-74 8-54 (270)
45 1krh_A Benzoate 1,2-dioxygenas 47.1 34 0.0012 32.3 6.6 43 28-75 107-151 (338)
46 2pia_A Phthalate dioxygenase r 46.3 43 0.0015 31.4 7.2 44 27-75 6-51 (321)
47 2bgi_A Ferredoxin-NADP(H) redu 45.0 35 0.0012 31.0 6.2 46 24-75 11-56 (272)
48 2qdx_A Ferredoxin reductase; o 42.5 46 0.0016 29.8 6.5 41 29-75 3-43 (257)
49 3s2u_A UDP-N-acetylglucosamine 40.6 20 0.00068 34.4 3.9 24 279-302 3-28 (365)
50 4fk8_A Ferredoxin--NADP reduct 37.5 45 0.0016 30.1 5.7 41 28-74 18-58 (271)
51 2lnb_A Z-DNA-binding protein 1 36.9 76 0.0026 23.5 5.5 26 401-426 41-66 (80)
52 4eh1_A Flavohemoprotein; struc 35.5 95 0.0032 27.2 7.4 41 30-75 4-46 (243)
53 1gvh_A Flavohemoprotein; oxido 32.2 93 0.0032 29.8 7.3 41 29-74 152-194 (396)
54 1fdr_A Flavodoxin reductase; f 31.8 92 0.0031 27.5 6.7 40 29-75 4-43 (248)
55 2gpj_A Siderophore-interacting 29.5 92 0.0031 27.9 6.3 44 28-76 7-52 (252)
56 3nrs_A Dihydrofolate:folylpoly 29.3 2.8E+02 0.0095 27.0 10.3 106 279-396 311-435 (437)
57 1cqx_A Flavohemoprotein; globi 25.6 1.6E+02 0.0055 28.2 7.6 41 29-74 154-196 (403)
58 1w78_A FOLC bifunctional prote 23.7 4.9E+02 0.017 24.9 12.1 107 280-398 297-416 (422)
59 4dka_C RNA-editing complex pro 22.0 2E+02 0.0067 22.4 5.7 55 219-290 38-100 (105)
60 1p32_A Mitochondrial matrix pr 21.6 45 0.0015 29.5 2.4 40 119-159 160-199 (209)
No 1
>3qfs_A CPR, P450R, NADPH--cytochrome P450 reductase; flavoprotein, FAD, oxidoreductase; HET: FAD NAP; 1.40A {Homo sapiens} PDB: 3qft_A*
Probab=100.00 E-value=6.6e-90 Score=705.06 Aligned_cols=418 Identities=42% Similarity=0.770 Sum_probs=380.0
Q ss_pred CCceeccCCCCC-CCCCCCCCCCCCCEEEEEEeeeeecCCCCCCcEEEEEEEeCCCCcccCCCCeEEEeccCCHHHHHHH
Q 014169 5 PTVTSSVDNYSN-MPNGNASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEA 83 (429)
Q Consensus 5 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~Lt~~~~~~~~~~i~l~~~~~~~~y~~GD~l~v~p~N~~~~V~~~ 83 (429)
.+|+.|+++... ..++..||+++|||.|+|++|++||+ +++|+|+||+||+++++++|+|||+|+|||.|+++.|+++
T Consensus 37 ~~~~~ge~~~~~~~~~~~~~~~~~~p~~a~v~~n~~Lt~-~~~r~~~hie~dl~~s~l~Y~~GD~l~V~p~N~~~~V~~~ 115 (458)
T 3qfs_A 37 AKVYMGEMGRLKSYENQKPPFDAKNPFLAAVTTNRKLNQ-GTERHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQL 115 (458)
T ss_dssp GGCBSSCSSSTTTTTSCCSCCCSSSCEEEEEEEEEECCS-SSSSCEEEEEEECTTSCCCCCTTCEEEECCCCCHHHHHHH
T ss_pred cccccCChhhcccccccCCCCCCCCCEEEEEEEEEEcCC-CCCCCEEEEEEEeCCCCcccCCCCEEEEEeeCCHHHHHHH
Confidence 457889997743 45688999999999999999999998 5689999999999998999999999999999999999999
Q ss_pred HHHhCCCCCcEEEEeeCCCCCCCCCCCCCCCCCCcccHHHHHhhhcccCCCCCHHHHHHHHHhCCCHHHHHHHHhccCC-
Q 014169 84 GKLLGQSLELLFSLHTDNEDGTPRGSSLTPPFPGPCTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFLSSP- 162 (429)
Q Consensus 84 l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~s~- 162 (429)
|++||+++|..|++....... ..+.|||.++|++++|++|+||+++|+|+||+.||.||+|+.+|++|.+|++.
T Consensus 116 l~~l~~~~d~~v~~~~~~~~~-----~~~~p~~~~~tl~~~l~~~~di~~~p~~~~l~~la~~a~~~~ek~~L~~l~~~~ 190 (458)
T 3qfs_A 116 GKILGADLDVVMSLNNLDEES-----NKKHPFPCPTSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSS 190 (458)
T ss_dssp HHHHTCCTTCEEEEEESSTTC-----SCCCSSSSSEEHHHHHHHTBCCSSCCCHHHHHHHGGGBCSHHHHHHHHHHHSCS
T ss_pred HHHhCcCCCceEEecCCCccc-----ccCCCCCCCeeHHHHHHhcEeccCCCCHHHHHHHHHHcCCHHHHHHHHHHhccC
Confidence 999999999999998654321 23468999999999999999999999999999999999999999999999874
Q ss_pred -CChhHHHHHHHhcCCCHHHHHHhCCCCCCChHHHHHhhcCCCCCceeecCCCCCCCCCeeEEEEEEEEccCCCCCcccC
Q 014169 163 -QGKDDYSQWVVASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKG 241 (429)
Q Consensus 163 -~g~~~~~~~~~~~~~~~~dvl~~f~~~~~~~gq~l~~~~p~~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~~~G 241 (429)
+|+++|.+|+.+++++++|||.+||++++|+++|++++ |+++||+|||||+|..+++.++|+|++++|+++.|+.+.|
T Consensus 191 ~~~~~~~~~~~~~~~~~ildvL~~fps~~~p~~~ll~~l-p~l~pR~YSIsSsp~~~~~~i~ltV~vv~~~~~~~r~~~G 269 (458)
T 3qfs_A 191 GEGKELYLSWVVEARRHILAILQDCPSLRPPIDHLCELL-PRLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKG 269 (458)
T ss_dssp HHHHHHHHHHTTTTTCCHHHHHHHSTTBCCCHHHHHHHS-CBCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSCEEEC
T ss_pred cccHHHHHHHHhhcCCCHHHHHHhCCccCCCHHHHHhhC-CCCcceeEeeccCcccCCCEEEEEEEEEEecCCCCCCCCC
Confidence 68999999999999999999999999999999999999 9999999999999987789999999999999988999999
Q ss_pred cccHHhhhcCCCCCCCCccEEEEEEeCCCccCCCCCCCCEEEEccCcccchhHHHHHHHHHHhhcCCCCCCeEEEEeccc
Q 014169 242 VCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRN 321 (429)
Q Consensus 242 ~~S~~L~~l~~G~~~~~~~~v~v~~p~g~F~lp~~~~~pii~Ia~GtGIAP~~s~l~~~~~~~~~~~~~~~~~L~~G~R~ 321 (429)
.||+||+++.+|++......|.+.+|.|.|.+|.+..+|+||||+|||||||+||++++....+.+...++++||||||+
T Consensus 270 ~~S~~L~~l~~gg~~~~~~~v~v~~p~g~F~lp~~~~~piImIggGTGIAPfrs~lq~r~~l~~~g~~~~~~~Lf~G~R~ 349 (458)
T 3qfs_A 270 VATNWLRAKEPVGENGGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRR 349 (458)
T ss_dssp HHHHHHHTCCSSCSSCCCCEEEEEEECCSCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHHTCCCCCEEEEEEESC
T ss_pred chhHHHHhhccCCccCCceEEEEEecCCCcccCCCCCCceEEEcCCcchhhHHHHHHHHHHHHhcCCCCCCEEEEEEeCC
Confidence 99999999887751111125999999999999988789999999999999999999998654333434579999999999
Q ss_pred CCcccccHHHHHHHHHcCCccEEEEEEecCCCCccchhhhHHHhHHHHHHhhcCCcEEEEeCCCchhHHHHHHHHHHHHH
Q 014169 322 RRMDFIYEDELNNFEEEGVISELILAFSREGSQKEYVQHKMMDKAAQLWSLLSKEGYLYVCGDAKGMARDVHRTLHTIVQ 401 (429)
Q Consensus 322 ~~~d~ly~~eL~~~~~~~~~~~l~~a~Sr~~~~k~yvq~~l~~~~~~l~~~l~~~~~vyvCGp~~~M~~~v~~~L~~i~~ 401 (429)
.+.|++|++||++|++.+.+++++++|||++..++|||+++.++.+.+++++.+++.||||||+..|+++|.++|.++++
T Consensus 350 ~~~D~ly~dEl~~l~~~g~l~~l~~a~SRd~~~k~yVqd~l~~~~~~l~~~l~~~~~vYvCGp~~~M~~~V~~~L~~i~~ 429 (458)
T 3qfs_A 350 SDEDYLYREELAQFHRDGALTQLNVAFSREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVA 429 (458)
T ss_dssp TTTSCTTHHHHHHHHHHTSSSEEEEEETTSSSSCCCHHHHHHHTHHHHHHHHHTTCEEEEEEETTTHHHHHHHHHHHHHH
T ss_pred chHhhhHHHHHHHHHHcCCCCEEEEEEECCCCCcccHhHHHHHhHHHHHHHhcCCCEEEEECCCHHHHHHHHHHHHHHHH
Confidence 74499999999999999988889999999988899999999999999999888899999999955899999999999999
Q ss_pred HccCCCHHHHHHHHHHHHHCCCeEEeeC
Q 014169 402 EQENVDSSKAESIVKKFQMEGRYLRDVW 429 (429)
Q Consensus 402 ~~~~~~~~~a~~~~~~l~~~~Ry~~dvw 429 (429)
++++++.++|++|+++|+++|||++|||
T Consensus 430 ~~g~~~~~~A~~~~~~l~~~~RY~~Dvw 457 (458)
T 3qfs_A 430 ELGAMEHAQAVDYIKKLMTKGRYSLDVW 457 (458)
T ss_dssp HHTTCCHHHHHHHHHHHHHTTSEEEEEE
T ss_pred HcCCCCHHHHHHHHHHHHHCCCeEEEec
Confidence 9999999999999999999999999999
No 2
>2qtl_A MSR;, methionine synthase reductase; alpha-beta-alpha structural motif, flattened antiparallel BE barrel, flexible hinge region, connecting domain; HET: FAD; 1.90A {Homo sapiens} PDB: 2qtz_A*
Probab=100.00 E-value=9.4e-84 Score=672.90 Aligned_cols=409 Identities=33% Similarity=0.604 Sum_probs=355.9
Q ss_pred CCCCCCCCCCCEEEEEEeeeeecCCCCCCcEEEEEEEeCCCCcccCCCCeEEEeccCCHHHHHHHHHHhCCCC--CcEEE
Q 014169 19 NGNASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKLLGQSL--ELLFS 96 (429)
Q Consensus 19 ~~~~~~~~~~~~~~~v~~~~~Lt~~~~~~~~~~i~l~~~~~~~~y~~GD~l~v~p~N~~~~V~~~l~~l~~~~--~~~~~ 96 (429)
+...||+.++||.|+|++|++||+.+++|+|+||+||+++++++|+|||+|+|+|.|+++.|+++|++||+++ +.+|.
T Consensus 104 ~~~~~~~~~~~~~a~v~~~~~Lt~~~~~r~v~hield~~~~~l~Y~~GD~l~V~P~N~~~~V~~~l~~lgl~~~~~~~v~ 183 (539)
T 2qtl_A 104 SQVSVTSADPVFQVPISKAVQLTTNDAIKTTLLVELDISNTDFSYQPGDAFSVICPNSDSEVQSLLQRLQLEDKREHCVL 183 (539)
T ss_dssp ---------CCEEEEEEEEEECSCTTCSSCEEEEEEECTTSCCCCCTTCEEEEECCCCHHHHHHHHHHTTCGGGTTSEEE
T ss_pred cccCCCCCCCCEEEEEEeeEEcCCCCCCCcEEEEEEecCCCCcCcCCCCEEEEEeCCCHHHHHHHHHHhCCCccCCeEEE
Confidence 4678999999999999999999999999999999999999889999999999999999999999999999986 56788
Q ss_pred EeeCCCCCCCCCCCCCCCCCCcccHHHHHhhhcccCCCCCHHHHHHHHHhCCCHHHHHHHHhccCCCChhHHHHHHHhcC
Q 014169 97 LHTDNEDGTPRGSSLTPPFPGPCTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFLSSPQGKDDYSQWVVASQ 176 (429)
Q Consensus 97 ~~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~s~~g~~~~~~~~~~~~ 176 (429)
+........+ +...+.+||.++|++++|++|+||+++|+|.||+.||.||+|+.+|++|.+|++.+|+++|.+|+.+++
T Consensus 184 ~~~~~~~~~~-~~~~p~~~p~~~tl~~~L~~~lDi~~~p~~~~l~~la~~a~d~~ek~~L~~l~s~~~~~~~~~~~~~~~ 262 (539)
T 2qtl_A 184 LKIKADTKKK-GATLPQHIPAGCSLQFIFTWCLEIRAIPKKAFLRALVDYTSDSAEKRRLQELCSKQGAADYSRFVRDAC 262 (539)
T ss_dssp EEECTTCCCT-TCCCCTTSCTTCBHHHHHHHTBCTTSCCCHHHHHHHHTTBCSHHHHHHHHHHHSSTTHHHHHHHTTTTT
T ss_pred EeccccccCC-CccCCCCCCCcccHHHHHHHHhhhcCCCCHHHHHHHHHHcCCHHHHHHHHHHhChhhHHHHHHHHhhcC
Confidence 7765432211 124567899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHhCCCCCCChHHHHHhhcCCCCCceeecCCCCCCCCCeeEEEEEEEEccCC--CCCcccCcccHHhhhc----
Q 014169 177 RSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTP--TGRIHKGVCSTWMKNA---- 250 (429)
Q Consensus 177 ~~~~dvl~~f~~~~~~~gq~l~~~~p~~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~--~g~~~~G~~S~~L~~l---- 250 (429)
++++|||.+||++++|+++|++++ |++++|+|||||+|..+++.++|+|+++.|+++ .++.+.|.||+||+++
T Consensus 263 ~~lldvL~~fps~~~p~~~ll~~l-p~l~~R~YSIsSsp~~~~~~i~ltV~~v~~~~~~~~~~~~~G~~S~~L~~l~~~~ 341 (539)
T 2qtl_A 263 ACLLDLLLAFPSCQPPLSLLLEHL-PKLQPRPYSCASSSLFHPGKLHFVFNIVEFLSTATTEVLRKGVCTGWLALLVASV 341 (539)
T ss_dssp CCHHHHHHHSTTBCCCHHHHHHHS-CBCCCEEEECCSCTTTSTTEEEEEEECCEEECSCSSCSEEECHHHHHHHHHTTTT
T ss_pred CCHHHHHHhCCCcCCCHHHHHHhC-cCCcceEEeecCCccCCCCEEEEEEEEEEeccCCCCCcCCCCchhhHHHHhhhhh
Confidence 999999999999999999999999 999999999999997567899999999988543 3466889999999997
Q ss_pred -------CCCCC-CCCccEEEEEEeCC-CccCCCCCCCCEEEEccCcccchhHHHHHHHHHHhhcC--CCCCCeEEEEec
Q 014169 251 -------IPLEG-NGDCSWAPIFIRPS-NFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDG--AQLGPALLFFGC 319 (429)
Q Consensus 251 -------~~G~~-~~~~~~v~v~~p~g-~F~lp~~~~~pii~Ia~GtGIAP~~s~l~~~~~~~~~~--~~~~~~~L~~G~ 319 (429)
++|+. ...+..|.|.+|.| .|.+|.+..+|+||||+|||||||+||++++....+.+ ...++++|||||
T Consensus 342 ~~~~~~~~~Gd~~~~~~~~V~v~~p~g~~F~Lp~~~~~piImIg~GTGIAPfrsflq~r~~~~~~~~~~~~~~v~LffG~ 421 (539)
T 2qtl_A 342 LQPNIHASHEDSGKALAPKISIFPRTTNSFHLPDDPSIPIIMVGPGTGIAPFIGFLQHREKLQEQHPDGNFGAMWLFFGC 421 (539)
T ss_dssp C--------------CCCEEEEEECSCCCCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHHCTTCCCCCEEEEEEE
T ss_pred ccccccCCCCCccccCceEEEEEeeeCCCccCCccCCCCEEEEEcCccHHHHHHHHHHHHHHHhccccCCCCCEEEEEEE
Confidence 77740 11112799999987 99999877899999999999999999999987654322 245899999999
Q ss_pred ccCCcccccHHHHHHHHHcCCccEEEEEEecCCC------CccchhhhHHHhHHHHHHhh-cCCcEEEEeCCCchhHHHH
Q 014169 320 RNRRMDFIYEDELNNFEEEGVISELILAFSREGS------QKEYVQHKMMDKAAQLWSLL-SKEGYLYVCGDAKGMARDV 392 (429)
Q Consensus 320 R~~~~d~ly~~eL~~~~~~~~~~~l~~a~Sr~~~------~k~yvq~~l~~~~~~l~~~l-~~~~~vyvCGp~~~M~~~v 392 (429)
|+.+.|++|++||++|++.+.+++++++|||++. .++|||++|.++.+.+++++ ..+++||||||+..|+++|
T Consensus 422 R~~~~D~ly~dEL~~~~~~g~~~~l~~afSRd~~~~~~~g~k~yVqd~l~e~~~~l~~~l~~~~a~vYVCGp~~~M~~~V 501 (539)
T 2qtl_A 422 RHKDRDYLFRKELRHFLKHGILTHLKVSFSRDAPVGEEEAPAKYVQDNIQLHGQQVARILLQENGHIYVCGDAKNMAKDV 501 (539)
T ss_dssp SCTTTCCTTHHHHHHHHHTTSSCEEEEEESSSCC------CCCSHHHHHHHTHHHHHHHHHHSCCEEEEEESCHHHHHHH
T ss_pred CCcchhhHHHHHHHHHHHhCCCcEEEEEEccCCCccccCCCccchhHHHHHhHHHHHHhhccCCcEEEEECCCHHHHHHH
Confidence 9994499999999999999998899999999976 68999999999999999988 5689999999944999999
Q ss_pred HHHHHHHHHHccCCCHHHHHHHHHHHHHCCCeEEeeC
Q 014169 393 HRTLHTIVQEQENVDSSKAESIVKKFQMEGRYLRDVW 429 (429)
Q Consensus 393 ~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~Ry~~dvw 429 (429)
.++|.++++++++++.++|++|+++|+++|||++|||
T Consensus 502 ~~~L~~i~~~~~~~~~~~A~~~l~~l~~~~RY~~Dvw 538 (539)
T 2qtl_A 502 HDALVQIISKEVGVEKLEAMKTLATLKEEKRYLQDIW 538 (539)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEC
T ss_pred HHHHHHHHHHhCCCCHHHHHHHHHHHHHCCcEEEEcC
Confidence 9999999999999999999999999999999999999
No 3
>3qe2_A CPR, P450R, NADPH--cytochrome P450 reductase; cypor, antley-bixler syndrome, flavoprotein, FMN, FAD, oxidoreductase; HET: FAD FMN NAP; 1.75A {Homo sapiens} PDB: 3qfc_A* 3qfr_A* 1amo_A* 1j9z_A* 1ja0_A* 1ja1_A* 3es9_A* 3ojw_A* 3ojx_A* 3fjo_A* 1b1c_A*
Probab=100.00 E-value=6.5e-84 Score=686.18 Aligned_cols=402 Identities=43% Similarity=0.798 Sum_probs=369.0
Q ss_pred CCCCCCCCCCEEEEEEeeeeecCCCCCCcEEEEEEEeCCCCcccCCCCeEEEeccCCHHHHHHHHHHhCCCCCcEEEEee
Q 014169 20 GNASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKLLGQSLELLFSLHT 99 (429)
Q Consensus 20 ~~~~~~~~~~~~~~v~~~~~Lt~~~~~~~~~~i~l~~~~~~~~y~~GD~l~v~p~N~~~~V~~~l~~l~~~~~~~~~~~~ 99 (429)
+..+|+.++||.|+|++|++||+ +++++|+||+|++++++++|+|||+|+|+|.|+++.|+++|++||+++|++|+++.
T Consensus 213 ~~~~~~~~~~~~a~v~~n~~Lt~-~~~~~~~hie~~~~~~~~~Y~~GD~l~V~p~N~~~~V~~~l~~l~l~~d~~v~~~~ 291 (618)
T 3qe2_A 213 QKPPFDAKNPFLAAVTTNRKLNQ-GTERHLMHLELDISDSKIRYESGDHVAVYPANDSALVNQLGKILGADLDVVMSLNN 291 (618)
T ss_dssp CCSCCSSSSCEEEEEEEEEECSC-CSSSCEEEEEEECTTSCCCCCTTCEEEECCCCCHHHHHHHHHHTTCCTTCEEEEEE
T ss_pred cCCCcccCCcEEEEEEeEEEcCC-CCCCcEEEEEEEcCCCCcccccCCEEEEEcCCCHHHHHHHHHHhCcCCCceEEEec
Confidence 46789999999999999999996 56899999999999889999999999999999999999999999999999999986
Q ss_pred CCCCCCCCCCCCCCCCCCcccHHHHHhhhcccCCCCCHHHHHHHHHhCCCHHHHHHHHhcc--CCCChhHHHHHHHhcCC
Q 014169 100 DNEDGTPRGSSLTPPFPGPCTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFLS--SPQGKDDYSQWVVASQR 177 (429)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~tl~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~--s~~g~~~~~~~~~~~~~ 177 (429)
..... ..+.|||.|+|++++|++|+||+++|+++||+.||.||+|+.+|++|.+|+ +++|+++|.+|+.++++
T Consensus 292 ~~~~~-----~~~~~~p~~~tl~~~l~~~~di~~~p~~~~l~~la~~~~~~~~k~~L~~l~~~~~~~~~~~~~~~~~~~~ 366 (618)
T 3qe2_A 292 LDEES-----NKKHPFPCPTSYRTALTYYLDITNPPRTNVLYELAQYASEPSEQELLRKMASSSGEGKELYLSWVVEARR 366 (618)
T ss_dssp SCTTC-----SCCSSSSSSEEHHHHHHHTBCCSSCCCHHHHHHHGGGBCSHHHHHHHHHTTCSSSHHHHHHHHHTTTTTC
T ss_pred CCccc-----cCCCCCCCceEHHHhhhhEeecCCCCcHHHHHHHHHHcCCHHHHHHHHHhhccChhhHHHHHHHHhhcCC
Confidence 54421 235689999999999999999999999999999999999999999999998 78899999999999999
Q ss_pred CHHHHHHhCCCCCCChHHHHHhhcCCCCCceeecCCCCCCCCCeeEEEEEEEEccCCCCCcccCcccHHhhhcCC-CCCC
Q 014169 178 SLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIP-LEGN 256 (429)
Q Consensus 178 ~~~dvl~~f~~~~~~~gq~l~~~~p~~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~~l~~-G~~~ 256 (429)
+++|||.+||++++|+++|++++ |+++||+|||||+|..+++.++|+|+++.|+++.++.+.|.||+||+++.+ |++
T Consensus 367 ~i~dvL~~fps~~~p~~~l~~~l-p~l~pR~YSIsSsp~~~~~~i~ltv~vv~~~~~~~~~~~G~~S~~L~~l~~~Gd~- 444 (618)
T 3qe2_A 367 HILAILQDCPSLRPPIDHLCELL-PRLQARYYSIASSSKVHPNSVHICAVVVEYETKAGRINKGVATNWLRAKEPVGEN- 444 (618)
T ss_dssp CHHHHHHHSTTBCCCHHHHHHHS-CBCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSCEEECHHHHHHHTCCCC----
T ss_pred CHHHHHHhCCccCCCHHHHHHhc-cccccceeccccCCcCCCCEEEEEEEEEEEecCCCCCCCCcccHHHHhhcccCCC-
Confidence 99999999999999999999999 999999999999998778999999999999998899999999999999887 640
Q ss_pred CCccEEEEEEeCCCccCCCCCCCCEEEEccCcccchhHHHHHHHHHHhhcCCCCCCeEEEEecccCCcccccHHHHHHHH
Q 014169 257 GDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFE 336 (429)
Q Consensus 257 ~~~~~v~v~~p~g~F~lp~~~~~pii~Ia~GtGIAP~~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~~eL~~~~ 336 (429)
.....|.|++|.|.|.+|.+..+|+||||+|||||||+||++++......+...++++||||||+++.|++|++||++|.
T Consensus 445 ~~~~~v~v~~p~g~F~lp~~~~~piimIg~GtGIAPfrs~l~~r~~~~~~g~~~~~~~L~~G~R~~~~D~ly~~el~~~~ 524 (618)
T 3qe2_A 445 GGRALVPMFVRKSQFRLPFKATTPVIMVGPGTGVAPFIGFIQERAWLRQQGKEVGETLLYYGCRRSDEDYLYREELAQFH 524 (618)
T ss_dssp --CCEEEEEEECCSCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHTTCCCCCEEEEEEESCTTTSCTTHHHHHHHH
T ss_pred CcceEEEEEEecCcccCCCCCCCCeEEEcCCcchhhHHHHHHHHHHHHhcCCCCCCEEEEEecCCCccccchHHHHHHHH
Confidence 00127999999999999988789999999999999999999999865444434689999999999954999999999999
Q ss_pred HcCCccEEEEEEecCCCCccchhhhHHHhHHHHHHhhcCCcEEEEeCCCchhHHHHHHHHHHHHHHccCCCHHHHHHHHH
Q 014169 337 EEGVISELILAFSREGSQKEYVQHKMMDKAAQLWSLLSKEGYLYVCGDAKGMARDVHRTLHTIVQEQENVDSSKAESIVK 416 (429)
Q Consensus 337 ~~~~~~~l~~a~Sr~~~~k~yvq~~l~~~~~~l~~~l~~~~~vyvCGp~~~M~~~v~~~L~~i~~~~~~~~~~~a~~~~~ 416 (429)
+.+.+++++++|||++..++|||+++.++.+.+++++.+++.||||||+..|+++|.++|.++++++++++.++|++|++
T Consensus 525 ~~g~l~~l~~a~Srd~~~k~yVqd~l~~~~~~l~~~l~~~a~vYvCGp~~~M~~~V~~~L~~i~~~~g~~~~~~a~~~~~ 604 (618)
T 3qe2_A 525 RDGALTQLNVAFSREQSHKVYVQHLLKQDREHLWKLIEGGAHIYVCGDARNMARDVQNTFYDIVAELGAMEHAQAVDYIK 604 (618)
T ss_dssp HHTSSSEEEEEETTSSSSCCCHHHHHHHTHHHHHHHHHHTCEEEEEEETTTHHHHHHHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred hcCCCcEEEEEEcCCCCCCCcHHHHHHHhHHHHHHHHhCCcEEEEECCchHHHHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 99988899999999988899999999999999999887889999999945899999999999999999999999999999
Q ss_pred HHHHCCCeEEeeC
Q 014169 417 KFQMEGRYLRDVW 429 (429)
Q Consensus 417 ~l~~~~Ry~~dvw 429 (429)
+|+++|||++|||
T Consensus 605 ~l~~~~RY~~Dv~ 617 (618)
T 3qe2_A 605 KLMTKGRYSLDVW 617 (618)
T ss_dssp HHHHTTSEEEEEE
T ss_pred HHHHcCCeEEeec
Confidence 9999999999999
No 4
>4dql_A Bifunctional P-450/NADPH-P450 reductase; rossmann fold, redox, FAD and NADP+ binding, oxidoreductase; HET: FAD NAP 1PE PG4; 2.15A {Bacillus megaterium} PDB: 4dqk_A*
Probab=100.00 E-value=7e-83 Score=644.19 Aligned_cols=385 Identities=35% Similarity=0.615 Sum_probs=342.7
Q ss_pred CCCCEEEEEEeeeeecCCCCCCcEEEEEEEeCCCCcccCCCCeEEEeccCCHHHHHHHHHHhCCCCCcEEEEeeCCCCCC
Q 014169 26 IHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKLLGQSLELLFSLHTDNEDGT 105 (429)
Q Consensus 26 ~~~~~~~~v~~~~~Lt~~~~~~~~~~i~l~~~~~~~~y~~GD~l~v~p~N~~~~V~~~l~~l~~~~~~~~~~~~~~~~~~ 105 (429)
...+|.|+|++|++||+++++|+|+||+|++++ +++|+|||+|+|+|.|+++.|+++|++||+++++.|.+......
T Consensus 3 ~~~~~~a~v~~n~~Lt~~~~~~~~~hie~~l~~-~~~Y~~GD~l~v~p~N~~~~V~~~l~~l~l~~~~~v~~~~~~~~-- 79 (393)
T 4dql_A 3 MHGAFSTNVVASKELQQPGSARSTRHLEIELPK-EASYQEGDHLGVIPRNYEGIVNRVTARFGLDASQQIRLEAEEEK-- 79 (393)
T ss_dssp --CCEEEEEEEEEECSCTTCSCCEEEEEEECCT-TCCCCTTCEEEECCCCCHHHHHHHHHHHTCCTTCEECCCC------
T ss_pred cCCcEEEEEEeEEEcCCCCCCceEEEEEEECCC-CCccCCCCEEEEEccCCHHHHHHHHHHhCcCCCCeEEEeCCCCc--
Confidence 346899999999999999999999999999985 89999999999999999999999999999999998876542211
Q ss_pred CCCCCCCCCCCCcccHHHHHhhhcccCCCCCHHHHHHHHHhCCCHHHHHHHHhccCCCChhHHHHHHHhcCCCHHHHHHh
Q 014169 106 PRGSSLTPPFPGPCTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFLSSPQGKDDYSQWVVASQRSLLEVMAE 185 (429)
Q Consensus 106 ~~~~~~~~~~~~~~tl~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~s~~g~~~~~~~~~~~~~~~~dvl~~ 185 (429)
....|++.|+|++++|++ +||+++|+++||+.||.||+|+.+|++|++|++. ++|.+|+.+++++++|+|.+
T Consensus 80 ----~~~~p~~~~~tl~~~l~~-~di~~~~~~~~l~~la~~~~~~~~~~~L~~l~~~---~~~~~~~~~~~~~~ldvL~~ 151 (393)
T 4dql_A 80 ----LAHLPLAKTVSVEELLQY-VELQDPVTRTQLRAMAAKTVCPPHKVELEALLEK---QAYKEQVLAKRLTMLELLEK 151 (393)
T ss_dssp -----------CCEEHHHHTTS-BCSSSBCCHHHHHHHHHTCCSHHHHHHHHHTTSH---HHHHHHTTTTTCBHHHHHHH
T ss_pred ----cccCCCCCcEEHHHHHHh-ccccCCCCHHHHHHHHHhCCCHHHHHHHHHHhCc---hHHHHHHhccCCCHHHHHHh
Confidence 124578889999999999 9999999999999999999999999999999763 37999999999999999999
Q ss_pred CCCCCCChHHHHHhhcCCCCCceeecCCCCCCCCCeeEEEEEEEEccCCCCC-cccCcccHHhhhcCCCCCCCCccEEE-
Q 014169 186 FPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGR-IHKGVCSTWMKNAIPLEGNGDCSWAP- 263 (429)
Q Consensus 186 f~~~~~~~gq~l~~~~p~~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~-~~~G~~S~~L~~l~~G~~~~~~~~v~- 263 (429)
||++++|+++|++++ |++++|+|||||+|..+++.++|+|+++.++++.|+ .+.|.||+||+++++|+ .|.
T Consensus 152 fps~~~p~~~~l~~l-p~l~~R~YSIsSsp~~~~~~i~l~v~vv~~~~~~g~~~~~G~~S~~L~~l~~Gd------~v~v 224 (393)
T 4dql_A 152 YPACEMKFSEFIALL-PSIRPRYYSISSSPRVDEKQASITVSVVSGEAWSGYGEYKGIASNYLAELQEGD------TITC 224 (393)
T ss_dssp CTTCCCCHHHHHHTS-CBCCCEEEECCSCTTTCTTEEEEEEECCEEECTTSSSEEECHHHHHHHHCCTTC------EEEE
T ss_pred CCCCCCCHHHHHHhC-CCCcceeeeccccccccCceEEEEEEEEecccCCCCcccCCccchhHHhCCCcC------EEEE
Confidence 999999999999998 999999999999998767899999999988776654 46699999999999998 888
Q ss_pred -EEEeCCCccCCCCCCCCEEEEccCcccchhHHHHHHHHHHhhcCCCCCCeEEEEecccCCcccccHHHHHHHHHcCCcc
Q 014169 264 -IFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVIS 342 (429)
Q Consensus 264 -v~~p~g~F~lp~~~~~pii~Ia~GtGIAP~~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~~eL~~~~~~~~~~ 342 (429)
|.+|.|.|.+|.+..+|+||||+|||||||+||++++....+.+...++++||||||+++.|++|++||++|++.+.+
T Consensus 225 ~v~~P~g~F~lp~~~~~piImIg~GtGIAPf~s~l~~r~~~~~~g~~~~~v~L~~G~R~~~~d~ly~~el~~~~~~~~l- 303 (393)
T 4dql_A 225 FISTPQSEFTLPKDPETPLIMVGPGTGVAPFRGFVQARKQLKEQGQSLGEAHLYFGCRSPHEDYLYQEELENAQSEGII- 303 (393)
T ss_dssp EEECCSSCCCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHHHHTTCCCCCEEEEEEESCTTTCCTTHHHHHHHHHTTSC-
T ss_pred EEEcCCCCcccCccCCCCeEEEccCceechHHHHHHHHHHHHhcCCCCCCEEEEEEECCcchhhHHHHHHHHHHhCCCe-
Confidence 567889999998878899999999999999999999866544444457899999999954499999999999987655
Q ss_pred EEEEEEec-CCCCccchhhhHHHhHHHHHHhhcCCcEEEEeCCCchhHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHC
Q 014169 343 ELILAFSR-EGSQKEYVQHKMMDKAAQLWSLLSKEGYLYVCGDAKGMARDVHRTLHTIVQEQENVDSSKAESIVKKFQME 421 (429)
Q Consensus 343 ~l~~a~Sr-~~~~k~yvq~~l~~~~~~l~~~l~~~~~vyvCGp~~~M~~~v~~~L~~i~~~~~~~~~~~a~~~~~~l~~~ 421 (429)
+++++||| ++..++|||+++.++.+.+++++.+++.||||||++.|.++|.++|.+++++++|++.++|++|+++|+++
T Consensus 304 ~l~~a~Sr~~~~~k~yVq~~l~~~~~~l~~~l~~~~~vYvCGp~~~M~~~V~~~L~~i~~~~~~~~~~~a~~~~~~l~~~ 383 (393)
T 4dql_A 304 TLHTAFSRMPNQPKTYVQHVMEQDGKKLIELLDQGAHFYICGDGSQMAPAVEATLMKSYADVHQVSEADARLWLQQLEEK 383 (393)
T ss_dssp EEEEEESSCTTSCCCCHHHHHHHTHHHHHHHHHTTCEEEEEEETTTHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHT
T ss_pred EEEEEEeCCCCCCCcchhhHHHhCHHHHHHHHhCCcEEEEECCchhhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHC
Confidence 79999999 55678999999999999999988889999999997789999999999999999999999999999999999
Q ss_pred CCeEEeeC
Q 014169 422 GRYLRDVW 429 (429)
Q Consensus 422 ~Ry~~dvw 429 (429)
|||++|||
T Consensus 384 ~Ry~~dv~ 391 (393)
T 4dql_A 384 GRYAKDVW 391 (393)
T ss_dssp TCEEEEEE
T ss_pred CCEEEEec
Confidence 99999999
No 5
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidore; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4
Probab=100.00 E-value=1.1e-80 Score=636.77 Aligned_cols=397 Identities=36% Similarity=0.656 Sum_probs=354.3
Q ss_pred CCCCCCCCEEEEEEeeeeecCCCCCCcEEEEEEEeCCC-CcccCCCCeEEEeccCCHHHHHHHHHHhCC--CCCcEEEEe
Q 014169 22 ASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGT-GITYETGDHVGVYVENCDETVEEAGKLLGQ--SLELLFSLH 98 (429)
Q Consensus 22 ~~~~~~~~~~~~v~~~~~Lt~~~~~~~~~~i~l~~~~~-~~~y~~GD~l~v~p~N~~~~V~~~l~~l~~--~~~~~~~~~ 98 (429)
.+|+.++||.|+|++|++||+.+++|+|+||+|+++++ +++|+|||+|+|+|.|+++.|+++|++|++ ++|+.|.++
T Consensus 23 ~~~~~~~~~~a~v~~~~~l~~~~~~~~~~hiel~~~~~~~~~Y~~GD~l~V~p~N~~~~V~~~l~~l~~~~~~d~~v~~~ 102 (435)
T 1f20_A 23 SNVHKKRVSAARLLSRQNLQSPKSSRSTIFVRLHTNGNQELQYQPGDHLGVFPGNHEDLVNALIERLEDAPPANHVVKVE 102 (435)
T ss_dssp HHHHTSCCEEEEEEEEEECSCTTCSSCEEEEEEECTTCGGGCCCTTCEEEECCCCCHHHHHHHHTTBSSCCCTTSCEEEE
T ss_pred cccccCCcEEEEEEeEEECCCCCCCceEEEEEEECCCCCCCcCCCCCEEEEEecCCHHHHHHHHHHhCCCCCCCeEEEEe
Confidence 46889999999999999999999999999999999875 799999999999999999999999999976 678888886
Q ss_pred eCCCCCCCCCC----CCCCCCCCcccHHHHHhhhcccCCCCCHHHHHHHHHhCCCHHHHHHHHhccCCCChhHHHHHHHh
Q 014169 99 TDNEDGTPRGS----SLTPPFPGPCTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFLSSPQGKDDYSQWVVA 174 (429)
Q Consensus 99 ~~~~~~~~~~~----~~~~~~~~~~tl~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~s~~g~~~~~~~~~~ 174 (429)
.......+.+. ..+.+|| ++|++++|++|+||+++|++.||+.||.||+|+.+|++|.+|++ ++++|.+|+..
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~p-~~tl~~~l~~~~di~~~p~~~~l~~la~~~~~~~~k~~L~~l~~--~~~~~~~~~~~ 179 (435)
T 1f20_A 103 MLEERNTALGVISNWKDESRLP-PCTIFQAFKYYLDITTPPTPLQLQQFASLATNEKEKQRLLVLSK--GLQEYEEWKWG 179 (435)
T ss_dssp EEEEESSSTTCEEEEEECCSSC-SBCHHHHHHHTBCCSSCCCHHHHHHHHTTBCCHHHHHHHHHHTT--CSHHHHHHHHH
T ss_pred ccccccCCCCccccccccCCCC-CccHHHHHHhceecCCCCCHHHHHHHHHHCCCHHHHHHHHHhhc--CHHHHHHHHhc
Confidence 53211101000 1245788 99999999999999999999999999999999999999999975 78999999999
Q ss_pred cCCCHHHHHHhCCCCCCChHHHHHhhcCCCCCceeecCCCCCCCCCeeEEEEEEEEccCCCC--CcccCcccHHhhhcCC
Q 014169 175 SQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTPTG--RIHKGVCSTWMKNAIP 252 (429)
Q Consensus 175 ~~~~~~dvl~~f~~~~~~~gq~l~~~~p~~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g--~~~~G~~S~~L~~l~~ 252 (429)
.+++++|+|.+||+++++++.++..+ |++.+|+|||||+|..+++.++|+|+++.|.++.| +.+.|.||+||+++++
T Consensus 180 ~~~~i~~vl~~fps~~~p~~~l~~~l-p~l~~R~YSIsSsp~~~~~~i~l~v~vv~~~~~~g~~~~~~G~~S~~L~~l~~ 258 (435)
T 1f20_A 180 KNPTMVEVLEEFPSIQMPATLLLTQL-SLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNRIQA 258 (435)
T ss_dssp HCCCHHHHHHHSTTBCBCHHHHHHHS-CBCCCEEEECCSCTTTSTTEEEEEEECCEEECGGGTSCEEECHHHHHHTTCCT
T ss_pred cCCCHHHHHHhCCcCCCCHHHHHHhC-CCCCCccccccCCcccCCCeEEEEEEEEEEecCCCCCcccCCccchhHhhCCC
Confidence 99999999999999999999999998 99999999999999866789999999998877654 5678999999999999
Q ss_pred CCCCCCccEEEEEEeC-CCccCCCCCCCCEEEEccCcccchhHHHHHHHHHHhh-cCCCCCCeEEEEecccCCcccccHH
Q 014169 253 LEGNGDCSWAPIFIRP-SNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQ-DGAQLGPALLFFGCRNRRMDFIYED 330 (429)
Q Consensus 253 G~~~~~~~~v~v~~p~-g~F~lp~~~~~pii~Ia~GtGIAP~~s~l~~~~~~~~-~~~~~~~~~L~~G~R~~~~d~ly~~ 330 (429)
|+ .|.+.+|. |.|.+|.+..+|+||||+|||||||+||++++....+ .+...++++||||||+.+.|++|++
T Consensus 259 Gd------~v~v~~~~~g~F~lp~~~~~piilIagGtGIAP~~s~l~~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~~ 332 (435)
T 1f20_A 259 DD------VVPCFVRGAPSFHLPRNPQVPCILVGPGTGIAPFRSFWQQRQFDIQHKGMNPCPMVLVFGCRQSKIDHIYRE 332 (435)
T ss_dssp TC------EEEEEEECCTTSSCCSCTTSCEEEECCGGGGHHHHHHHHHHHHHHHHHCCCCCCEEEEEEESCTTTSCTTHH
T ss_pred CC------EEEEEEecCCCccCCCCCCCCEEEEECCcCcHHHHHHHHHHHHhhhhccCCCCCEEEEEeecccccchhHHH
Confidence 98 99999954 5999998778999999999999999999999886421 1224689999999999976899999
Q ss_pred HHHHHHHcCCccEEEEEEecCCCC-ccchhhhHHHh-HHHHHHhh-cCCcEEEEeCCCchhHHHHHHHHHHHHHHccCCC
Q 014169 331 ELNNFEEEGVISELILAFSREGSQ-KEYVQHKMMDK-AAQLWSLL-SKEGYLYVCGDAKGMARDVHRTLHTIVQEQENVD 407 (429)
Q Consensus 331 eL~~~~~~~~~~~l~~a~Sr~~~~-k~yvq~~l~~~-~~~l~~~l-~~~~~vyvCGp~~~M~~~v~~~L~~i~~~~~~~~ 407 (429)
||++|++.+.+++++++|||++.. ++|||+++.++ .+.+++++ ..++.|||||| +.|+++|.++|.+++.++++++
T Consensus 333 El~~~~~~~~~~~l~~a~Sr~~~~~k~yVq~~l~~~l~~~~~~~l~~~~~~vYvCGp-~~M~~~V~~~L~~i~~~~~~~~ 411 (435)
T 1f20_A 333 ETLQAKNKGVFRELYTAYSREPDRPKKYVQDVLQEQLAESVYRALKEQGGHIYVCGD-VTMAADVLKAIQRIMTQQGKLS 411 (435)
T ss_dssp HHHHHHHTTSEEEEEEEESSCTTSCCCCHHHHHHHHSHHHHHHHHHTSCCEEEEEEC-HHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHcCCccEEEEEECCCCCCCCcchhhHHHhhhHHHHHHHHhcCCcEEEEeCC-hhHHHHHHHHHHHHHHHcCCCC
Confidence 999999999888999999998764 89999999887 77788766 56889999999 6899999999999999999999
Q ss_pred HHHHHHHHHHHHHCCCeEEeeC
Q 014169 408 SSKAESIVKKFQMEGRYLRDVW 429 (429)
Q Consensus 408 ~~~a~~~~~~l~~~~Ry~~dvw 429 (429)
.++|++|+++|+++|||++|||
T Consensus 412 ~~~a~~~~~~l~~~~RY~~Dv~ 433 (435)
T 1f20_A 412 EEDAGVFISRLRDDNRYHEDIF 433 (435)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHCCCEEEEec
Confidence 9999999999999999999999
No 6
>2bpo_A CPR, P450R, NADPH-cytochrom P450 reductase; NADPH-cytochrome P450 reductase, diflavin reductase, FAD, FMN-binding, electron transfer; HET: FAD FMN NAP; 2.9A {Saccharomyces cerevisiae} PDB: 2bn4_A* 2bf4_A*
Probab=100.00 E-value=5.4e-81 Score=670.53 Aligned_cols=398 Identities=35% Similarity=0.640 Sum_probs=356.4
Q ss_pred CCCCCCCCCCEEEEEEeeeeecCCCCCCcEEEEEEEeCCCCcccCCCCeEEEeccCCHHHHHHHHHHhCCCCCcEEEEee
Q 014169 20 GNASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKLLGQSLELLFSLHT 99 (429)
Q Consensus 20 ~~~~~~~~~~~~~~v~~~~~Lt~~~~~~~~~~i~l~~~~~~~~y~~GD~l~v~p~N~~~~V~~~l~~l~~~~~~~~~~~~ 99 (429)
...+|+.++||.|+|++|++|++ +++|+|+||+||+++++++|+|||+|+|+|.|+++.|+++|++||+++|++|.+..
T Consensus 250 ~~~~~~~~~p~~a~v~~~~~L~~-~~~~~~~hie~d~~~~~~~Y~~GD~l~V~P~N~~~~V~~~l~~l~l~~d~~v~~~~ 328 (682)
T 2bpo_A 250 QLGPFDLSQPYIAPIVKSRELFS-SNDRNCIHSEFDLSGSNIKYSTGDHLAVWPSNPLEKVEQFLSIFNLDPETIFDLKP 328 (682)
T ss_dssp BCSCCBTTBCCCEEEEEEEECCC-CSSCCEEEEEEECTTBTCCCCTTCEEEECCCCCHHHHHHHHHHHTCCTTCEEECCB
T ss_pred ccCcccCCCceEEEEEEEEEccC-CCCCCEEEEEEEcCCCCceecCCCEEEEEcCCCHHHHHHHHHHhhccCCcEEEEec
Confidence 35679999999999999999998 88899999999999889999999999999999999999999999999999998875
Q ss_pred CCCCCCCCCCCCCCCCCCcccHHHHHhhhcccCCCCCHHHHHHHHHhCCCHHHHHHHHhccCCCChhHHHHHHHhcCCCH
Q 014169 100 DNEDGTPRGSSLTPPFPGPCTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFLSSPQGKDDYSQWVVASQRSL 179 (429)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~tl~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~s~~g~~~~~~~~~~~~~~~ 179 (429)
... ..+.|||.++|++++|++|+||+++|+|.||+.||.||+|+++|++|.+|+ +|+++|.+|+.++++|+
T Consensus 329 ~~~-------~~~~p~p~~~tl~~~l~~~ldi~~~p~~~~l~~la~~a~~~~~k~~L~~l~--~~~~~~~~~~~~~~~~i 399 (682)
T 2bpo_A 329 LDP-------TVKVPFPTPTTIGAAIKHYLEITGPVSRQLFSSLIQFAPNADVKEKLTLLS--KDKDQFAVEITSKYFNI 399 (682)
T ss_dssp SST-------TCCCSSCSSEEHHHHHHHTBCCSSCCCHHHHHHHSTTCSSHHHHHHHHHHT--TCHHHHHHHTGGGTCCH
T ss_pred CCc-------ccCCCCCCCccHHHHHHHhhhccCCCCHHHHHHHHHHCCCHHHHHHHHHhc--cCHHHHHHHHhcCCCCH
Confidence 443 234589999999999999999999999999999999999999999999996 89999999999999999
Q ss_pred HHHHHhCC----CCCCChHHHHHhhcCCCCCceeecCCCCCCCCCeeEEEEEEEEccCCC---CCcccCcccHHhhhcCC
Q 014169 180 LEVMAEFP----SATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTPT---GRIHKGVCSTWMKNAIP 252 (429)
Q Consensus 180 ~dvl~~f~----~~~~~~gq~l~~~~p~~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~---g~~~~G~~S~~L~~l~~ 252 (429)
+|||.+|| ++++|+++++.++ |++++|+|||||+|...++.++|+|+++.|+++. ++.+.|.||+||+++++
T Consensus 400 ~dvL~~fp~~~~s~~~p~~~l~~~l-p~l~~R~YSIsSsp~~~~~~i~ltv~Vv~~~~~~~~~~~~~~G~~S~~L~~l~~ 478 (682)
T 2bpo_A 400 ADALKYLSDGAKWDTVPMQFLVESV-PQMTPRYYSISSSSLSEKQTVHVTSIVENFPNPELPDAPPVVGVTTNLLRNIQL 478 (682)
T ss_dssp HHHHHHHHTTCCCTTSCHHHHHHHS-CBCCCEEEEBCSCTTTCTTEEEEEEECCEECCSSCTTSCCEECHHHHHHHHHHH
T ss_pred HHHHHhccCcccccCCCHHHHHHhC-cccccccccccCCcccCCCeEEEEEEEEEEecCcccCCcccCccccHHHHhccc
Confidence 99999999 8899999998888 9999999999999987678999999999998876 67889999999999877
Q ss_pred ------------CCCCC--------CccEEEEEEeCCCccCCCCCCCCEEEEccCcccchhHHHHHHHHHHhh------c
Q 014169 253 ------------LEGNG--------DCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQ------D 306 (429)
Q Consensus 253 ------------G~~~~--------~~~~v~v~~p~g~F~lp~~~~~pii~Ia~GtGIAP~~s~l~~~~~~~~------~ 306 (429)
|+... .+..|.++.+.+.|.+|.+..+|+||||+|||||||+||++++..... .
T Consensus 479 g~~~~~~~~~~~G~~v~i~GP~G~f~~~~v~v~vr~~~F~Lp~~~~~piImIg~GTGIAPfrs~lq~r~~~~~~~~~~~~ 558 (682)
T 2bpo_A 479 AQNNVNIAETNLPVHYDLNGPRKLFANYKLPVHVRRSNFRLPSNPSTPVIMIGPGTGVAPFRGFIRERVAFLESQKKGGN 558 (682)
T ss_dssp HHTTCCTTTSCCCCCCCSSCGGGTTTTTEECEEEECCSCCCCSSTTSCEEEEEEGGGGHHHHHHHHHHHHHHHTCC----
T ss_pred ccccccccccccccceeeccCcCcccCceEEEEEecCcccCCCCCCCCEEEEecCcChHHHHHHHHHHHHhhcccccccc
Confidence 43000 001455555555678887778999999999999999999999987543 2
Q ss_pred CCCCCCeEEEEecccCCcccccHHHHHHHH-HcCCccEEEEEEec-CCCCccchhhhHHHhHHHHHHhhcCCcEEEEeCC
Q 014169 307 GAQLGPALLFFGCRNRRMDFIYEDELNNFE-EEGVISELILAFSR-EGSQKEYVQHKMMDKAAQLWSLLSKEGYLYVCGD 384 (429)
Q Consensus 307 ~~~~~~~~L~~G~R~~~~d~ly~~eL~~~~-~~~~~~~l~~a~Sr-~~~~k~yvq~~l~~~~~~l~~~l~~~~~vyvCGp 384 (429)
+...++++||||||++. |++|++||++|+ +.+.+++++++||| ++..++|||++|.++.+.+++++.+++.||||||
T Consensus 559 g~~~~~~~L~fG~R~~~-D~ly~dEl~~~~~~~g~~~~l~~afSr~d~~~k~yVqd~l~e~~~~l~~~l~~~~~vYvCGp 637 (682)
T 2bpo_A 559 NVSLGKHILFYGSRNTD-DFLYQDEWPEYAKKLDGSFEMVVAHSRLPNTKKVYVQDKLKDYEDQVFEMINNGAFIYVCGD 637 (682)
T ss_dssp CCCCCCEEEEEEESSSS-SCTTTTTHHHHHHHHGGGEEEEEEESCCTTSCCCCHHHHHHHTHHHHHHHHTTTCEEEEEEC
T ss_pred cCCcCCEEEEEecCChh-hhhhHHHHHHHHHhcCCceEEEEEECCCCCCCCcchHHHHHhhHHHHHHHHhCCcEEEEeCC
Confidence 33368999999999996 999999999995 45788899999999 5667999999999999999998877899999999
Q ss_pred CchhHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHCCCeEEeeC
Q 014169 385 AKGMARDVHRTLHTIVQEQENVDSSKAESIVKKFQMEGRYLRDVW 429 (429)
Q Consensus 385 ~~~M~~~v~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~Ry~~dvw 429 (429)
++.|+++|.++|.++++++++++.++|++|+++|+++|||++|||
T Consensus 638 a~~M~~~V~~~L~~i~~~~~~~~~~~a~~~~~~l~~~~Ry~~Dvw 682 (682)
T 2bpo_A 638 AKGMAKGVSTALVGILSRGKSITTDEATELIKMLKTSGRYQEDVW 682 (682)
T ss_dssp STTHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEEC
T ss_pred chHhHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHCCCEEEEeC
Confidence 668999999999999999999999999999999999999999999
No 7
>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} SCOP: b.43.4.1 c.25.1.4 PDB: 1ddi_A*
Probab=100.00 E-value=6.9e-80 Score=619.16 Aligned_cols=370 Identities=29% Similarity=0.517 Sum_probs=342.1
Q ss_pred CCCCCCCCCCEEEEEEeeeeecCCCCCCcEEEEEEEeCCCCcccCCCCeEEEeccCCHHHHHHHHHHhCCCCCcEEEEee
Q 014169 20 GNASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKLLGQSLELLFSLHT 99 (429)
Q Consensus 20 ~~~~~~~~~~~~~~v~~~~~Lt~~~~~~~~~~i~l~~~~~~~~y~~GD~l~v~p~N~~~~V~~~l~~l~~~~~~~~~~~~ 99 (429)
+..+|+.++||.|+|++|++||+.+++|+|+||+||+++++++|+|||+|+|+|+|+++.|+++|++||+++++.|.+.
T Consensus 2 ~~~~~~~~~~~~a~v~~~~~lt~~~~~~~~~hi~~~~~~~~~~y~~GD~l~v~p~N~~~~V~~~l~~l~~~~~~~v~~~- 80 (374)
T 1ddg_A 2 HTSPYSKDAPLVASLSVNQKITGRNSEKDVRHIEIDLGDSGLRYQPGDALGVWYQNDPALVKELVELLWLKGDEPVTVE- 80 (374)
T ss_dssp CCCCCBTTBCEEEEEEEEEECSCTTCSSEEEEEEEECTTSCCCCCTTCEEEECCCCCHHHHHHHHHHTTCCSCSEEEET-
T ss_pred CCCCCCCCCCEEEEEEEEEEeCCCCCCceEEEEEEEcCCCCcccCCCCEEEEEcCCCHHHHHHHHHHhCCCCCceEEEC-
Confidence 3568999999999999999999999999999999999888999999999999999999999999999999999988773
Q ss_pred CCCCCCCCCCCCCCCCCCcccHHHHHhhhcccCCCCCHHHHHHHHHhCCCHHHHHHHHhccCCCChhHHHHHHHhcCCCH
Q 014169 100 DNEDGTPRGSSLTPPFPGPCTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFLSSPQGKDDYSQWVVASQRSL 179 (429)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~tl~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~s~~g~~~~~~~~~~~~~~~ 179 (429)
+.++|++++|++|+||+ +|+|+||+.||.||+|++ |.+|+ ++++.|.+|+.+ +++
T Consensus 81 ----------------~~~~tl~~~l~~~~di~-~p~~~~l~~la~~~~~~~----L~~l~--~~~~~~~~~~~~--~~~ 135 (374)
T 1ddg_A 81 ----------------GKTLPLNEALQWHFELT-VNTANIVENYATLTRSET----LLPLV--GDKAKLQHYAAT--TPI 135 (374)
T ss_dssp ----------------TEEEEHHHHHHHHBCCS-CCCHHHHHHHHHHHTCTT----TGGGT--TCTHHHHHHHHH--SCH
T ss_pred ----------------CCCccHHHHHHhcccCC-CCCHHHHHHHHHHCCCHH----HHHHh--cChHHHHHHHcC--CCH
Confidence 14899999999999999 899999999999999974 88886 578899999974 899
Q ss_pred HHHHHhCCCCCCChHHHHHhhcCCCCCceeecCCCCCCCCCeeEEEEEEEEccCCCCCcccCcccHHhhh-cCCCCCCCC
Q 014169 180 LEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKN-AIPLEGNGD 258 (429)
Q Consensus 180 ~dvl~~f~~~~~~~gq~l~~~~p~~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~~-l~~G~~~~~ 258 (429)
+|+|.+||+ ++++|||+++. +++.+|+|||||+|..+++.++|+|+++.|+++ |+.+.|.||+||++ +++|+
T Consensus 136 ~~vl~~~p~-~~~~Gq~v~l~-~~~~~R~YSIaSsp~~~~~~i~l~V~~v~~~~~-~~~~~G~~S~~L~~~l~~Gd---- 208 (374)
T 1ddg_A 136 VDMVRFSPA-QLDAEALINLL-RPLTPRLYSIASSQAEVENEVHVTVGVVRYDVE-GRARAGGASSFLADRVEEEG---- 208 (374)
T ss_dssp HHHHHHSCC-CCCHHHHHHHS-CBCCCEEEEBCCCTTTSCSEEEEEEEECEEEET-TEEEECHHHHHHHHSCCSSC----
T ss_pred HHHHHHCCC-CCCHHHHHhhc-cCCCCccceecCCCCCCCCEEEEEEEEEEeecC-CCCCCCCchHHHHhcCCCCC----
Confidence 999999998 99999999999 779999999999997667899999999988775 66788999999999 99998
Q ss_pred ccEEEEEEeCC-CccCCCCCCCCEEEEccCcccchhHHHHHHHHHHhhcCCCCCCeEEEEecccCCcccccHHHHHHHHH
Q 014169 259 CSWAPIFIRPS-NFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEE 337 (429)
Q Consensus 259 ~~~v~v~~p~g-~F~lp~~~~~pii~Ia~GtGIAP~~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~~eL~~~~~ 337 (429)
.|.+.+|.| .|.+|.+..+|+||||+|||||||+||++++... + ..++++||||||+.+.|++|++||++|++
T Consensus 209 --~v~v~~~~~g~F~lp~~~~~piimIa~GtGIAP~~s~l~~~~~~---~-~~~~~~L~~G~R~~~~d~ly~~El~~~~~ 282 (374)
T 1ddg_A 209 --EVRVFIEHNDNFRLPANPETPVIMIGPGTGIAPFRAFMQQRAAD---E-APGKNWLFFGNPHFTEDFLYQVEWQRYVK 282 (374)
T ss_dssp --EEEEEEECCTTSCCCSSTTSCEEEECCGGGGHHHHHHHHHHHHH---T-CCSCEEEEEEESCHHHHCTTHHHHHHHHH
T ss_pred --EEEEEEeeCCCccCCCCCCCCEEEEECCccHHHHHHHHHHHHhc---C-CCCCEEEEEEeCCchhhhhHHHHHHHHHH
Confidence 999999655 9999987789999999999999999999998863 2 45799999999998339999999999999
Q ss_pred cCCccEEEEEEecCCCCccchhhhHHHhHHHHHHhhcCCcEEEEeC-CCchhHHHHHHHHHHHHHHccCCCHHHHHHHHH
Q 014169 338 EGVISELILAFSREGSQKEYVQHKMMDKAAQLWSLLSKEGYLYVCG-DAKGMARDVHRTLHTIVQEQENVDSSKAESIVK 416 (429)
Q Consensus 338 ~~~~~~l~~a~Sr~~~~k~yvq~~l~~~~~~l~~~l~~~~~vyvCG-p~~~M~~~v~~~L~~i~~~~~~~~~~~a~~~~~ 416 (429)
.+.+++++++|||++..++|||+++.++.+.+++++.+++.||||| | +.|+++|.++|.++++++++++.++|++|++
T Consensus 283 ~~~~~~l~~a~Srd~~~k~yVq~~l~~~~~~l~~~l~~~~~vYvCG~p-~~M~~~V~~~L~~i~~~~~~~~~~~a~~~~~ 361 (374)
T 1ddg_A 283 EGVLTRIDLAWSRDQKEKVYVQDKLREQGAELWRWINDGAHIYVCGDA-NRMAKDVEQALLEVIAEFGGMDTEAADEFLS 361 (374)
T ss_dssp TTSCCEEEEEETTSSSSCCCHHHHHHHTHHHHHHHHHTTCEEEEEECT-TTHHHHHHHHHHHHHHHTTTCCHHHHHHHHH
T ss_pred hCCCcEEEEEEecCCCCCccHHHHHHHhHHHHHHHHhCCcEEEEECCC-HHHHHHHHHHHHHHHHHhCCCCHHHHHHHHH
Confidence 9988899999999988899999999998888988887789999999 7 8999999999999999999999999999999
Q ss_pred HHHHCCCeEEeeC
Q 014169 417 KFQMEGRYLRDVW 429 (429)
Q Consensus 417 ~l~~~~Ry~~dvw 429 (429)
+|+++|||++|||
T Consensus 362 ~l~~~~Ry~~dv~ 374 (374)
T 1ddg_A 362 ELRVERRYQRDVY 374 (374)
T ss_dssp HHHHTTCEEEEEC
T ss_pred HHHHCCCeEEecC
Confidence 9999999999999
No 8
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4
Probab=100.00 E-value=5.7e-75 Score=623.90 Aligned_cols=395 Identities=36% Similarity=0.656 Sum_probs=351.6
Q ss_pred CCCCCCEEEEEEeeeeecCCCCCCcEEEEEEEeCCC-CcccCCCCeEEEeccCCHHHHHHHHHHhCC--CCCcEEEEeeC
Q 014169 24 FDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGT-GITYETGDHVGVYVENCDETVEEAGKLLGQ--SLELLFSLHTD 100 (429)
Q Consensus 24 ~~~~~~~~~~v~~~~~Lt~~~~~~~~~~i~l~~~~~-~~~y~~GD~l~v~p~N~~~~V~~~l~~l~~--~~~~~~~~~~~ 100 (429)
++.++||.++|++|++||+.+++|+|+||+|+++++ +++|+|||+|+|+|.|+++.|+++|++|++ ++|+.|.+...
T Consensus 246 ~~~~~~~~a~v~~~~~Lt~~~~~~~~~hiel~~~~~~~~~Y~~GD~l~V~P~N~~~~V~~~l~~l~~~~~~d~~v~~~~~ 325 (688)
T 1tll_A 246 VHKKRVSAARLLSRQNLQSPKSSRSTIFVRLHTNGNQELQYQPGDHLGVFPGNHEDLVNALIERLEDAPPANHVVKVEML 325 (688)
T ss_dssp HTTSCCEEEEEEEEEECSCTTCSSCEEEEEEECTTCGGGCCCTTCEEEECCCCCHHHHHHHHTTCSSCCCSCSCEEEEEE
T ss_pred cccCCceEEEEEeeeecCCCCCCceEEEEEEecCCCCCCccCCCCEEEEecCCCHHHHHHHHHHhCCCCCCCeEEEEecc
Confidence 567899999999999999999999999999999875 799999999999999999999999999986 67888888653
Q ss_pred CCCCCCCC----CCCCCCCCCcccHHHHHhhhcccCCCCCHHHHHHHHHhCCCHHHHHHHHhccCCCChhHHHHHHHhcC
Q 014169 101 NEDGTPRG----SSLTPPFPGPCTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFLSSPQGKDDYSQWVVASQ 176 (429)
Q Consensus 101 ~~~~~~~~----~~~~~~~~~~~tl~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~s~~g~~~~~~~~~~~~ 176 (429)
.....+.+ ...+.+|| ++|++++|++|+||+++|+|.||+.||.||+|+.+|++|.+|++ ++++|.+|+...+
T Consensus 326 ~~~~~p~~~~~~~~~~~~~p-~~tl~~~l~~~lDi~~~p~~~~l~~la~~a~~~~ek~~L~~l~~--~~~~~~~~~~~~~ 402 (688)
T 1tll_A 326 EERNTALGVISNWKDESRLP-PCTIFQAFKYYLDITTPPTPLQLQQFASLATNEKEKQRLLVLSK--GLQEYEEWKWGKN 402 (688)
T ss_dssp EECCCSSSCCEEEEECCSSC-SBCHHHHHHHTBCCSSCCCHHHHHHHHTTBCCHHHHHHHHHHTT--CSHHHHHHHHHHC
T ss_pred ccccCCCcccccccccCCCC-CccHHHHHHhheeCCCCCCHHHHHHHHHHcCCHHHHHHHHHHhc--CHHHHHHHHhhcC
Confidence 22111100 01234788 99999999999999999999999999999999999999999974 7899999999999
Q ss_pred CCHHHHHHhCCCCCCChHHHHHhhcCCCCCceeecCCCCCCCCCeeEEEEEEEEccCCCC--CcccCcccHHhhhcCCCC
Q 014169 177 RSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTPTG--RIHKGVCSTWMKNAIPLE 254 (429)
Q Consensus 177 ~~~~dvl~~f~~~~~~~gq~l~~~~p~~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g--~~~~G~~S~~L~~l~~G~ 254 (429)
++++|||.+||++++|++.++..+ |++.+|+|||||+|..+++.++|+|+++.|.++.| +.+.|.||+||+++++|+
T Consensus 403 ~~i~evl~~fps~~~p~~~l~~~l-p~l~~R~YSIsSsp~~~~~~i~l~V~vv~~~~~~g~~~~~~G~~S~~L~~l~~Gd 481 (688)
T 1tll_A 403 PTMVEVLEEFPSIQMPATLLLTQL-SLLQPRYYSISSSPDMYPDEVHLTVAIVSYHTRDGEGPVHHGVCSSWLNRIQADD 481 (688)
T ss_dssp CCHHHHHHHSTTBCCCHHHHHHHS-CBCCCEEEEBCSCTTTSTTEEEEEEECCEEETGGGTSCEEECHHHHHHTTCCTTS
T ss_pred CCHHHHHHhCCCcCCCHHHHHHhC-cccceeEEeecCCcccCCCeEEEEEEEEEEecCCCCCCcCCCchhHHHHhCCCCC
Confidence 999999999999999999888888 99999999999999866789999999998877654 567899999999999998
Q ss_pred CCCCccEEEEEEeCC-CccCCCCCCCCEEEEccCcccchhHHHHHHHHHHhh-cCCCCCCeEEEEecccCCcccccHHHH
Q 014169 255 GNGDCSWAPIFIRPS-NFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQ-DGAQLGPALLFFGCRNRRMDFIYEDEL 332 (429)
Q Consensus 255 ~~~~~~~v~v~~p~g-~F~lp~~~~~pii~Ia~GtGIAP~~s~l~~~~~~~~-~~~~~~~~~L~~G~R~~~~d~ly~~eL 332 (429)
.|.|.+|.+ .|.+|.+..+|+||||+|||||||+||++++....+ .+...++++||||||+.+.|++|++||
T Consensus 482 ------~v~v~~~p~g~F~lp~~~~~piIlIagGtGIAP~~s~l~~~~~~~~~~~~~~~~v~L~~G~R~~~~D~ly~dEL 555 (688)
T 1tll_A 482 ------VVPCFVRGAPSFHLPRNPQVPCILVGPGTGIAPFRSFWQQRQFDIQHKGMNPCPMVLVFGCRQSKIDHIYREET 555 (688)
T ss_dssp ------EEEEEEECCGGGSCCSCTTSCEEEEEEGGGGTTHHHHHHHHHHHHHHSCCCCCCEEEEEEESCTTTTCTTHHHH
T ss_pred ------EEEEEeccCCCcccCcCCCCCEEEEEcCcchHHHHHHHHHHHHhhhhccCCCCCEEEEEEeccchhhhhHHHHH
Confidence 999999655 999998778999999999999999999999887422 122568999999999997689999999
Q ss_pred HHHHHcCCccEEEEEEecCCCC-ccchhhhHHHh-HHHHHHhh-cCCcEEEEeCCCchhHHHHHHHHHHHHHHccCCCHH
Q 014169 333 NNFEEEGVISELILAFSREGSQ-KEYVQHKMMDK-AAQLWSLL-SKEGYLYVCGDAKGMARDVHRTLHTIVQEQENVDSS 409 (429)
Q Consensus 333 ~~~~~~~~~~~l~~a~Sr~~~~-k~yvq~~l~~~-~~~l~~~l-~~~~~vyvCGp~~~M~~~v~~~L~~i~~~~~~~~~~ 409 (429)
++|++.+.+++++++|||++.. ++|||++|.++ .+.+++++ ..+++|||||| +.|+++|.++|.+++.+++|++.+
T Consensus 556 ~~~~~~~~~~~l~~a~Sr~~~~~k~yVq~~l~~~l~~~l~~~l~~~~~~vYvCGp-~~M~~~V~~~L~~i~~~~gg~~~~ 634 (688)
T 1tll_A 556 LQAKNKGVFRELYTAYSREPDRPKKYVQDVLQEQLAESVYRALKEQGGHIYVCGD-VTMAADVLKAIQRIMTQQGKLSEE 634 (688)
T ss_dssp HHHHHTTSEEEEEEEESSCTTSCCCCHHHHHHHSSHHHHHHHHHTSCCEEEEEEE-HHHHHHHHHHHHHHHHTTTCCCTT
T ss_pred HHHHHcCCceEEEEEECCCCCCCccchhhhhHHhHHHHHHHhhccCCcEEEEeCC-HHHHHHHHHHHHHHHHHcCCCCHH
Confidence 9999999888999999998764 89999999988 77788766 56899999999 789999999999999999999999
Q ss_pred HHHHHHHHHHHCCCeEEeeC
Q 014169 410 KAESIVKKFQMEGRYLRDVW 429 (429)
Q Consensus 410 ~a~~~~~~l~~~~Ry~~dvw 429 (429)
+|++|+++|+.++||+.|+|
T Consensus 635 ~a~~~l~~l~~~~ry~~Evf 654 (688)
T 1tll_A 635 DAGVFISRLRDDNRYHEDIF 654 (688)
T ss_dssp HHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHhhhhcCCEEEEec
Confidence 99999999999999999998
No 9
>1fnb_A Ferredoxin-NADP+ reductase; oxidoreductase (NADP+(A),ferredoxin(A)); HET: FAD; 1.70A {Spinacia oleracea} SCOP: b.43.4.2 c.25.1.1 PDB: 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 1qg0_A* 1qga_A* 1qfz_A* 1qfy_A* 1gaw_A* 1gaq_A* 3mhp_A* 1sm4_A* 2xnc_A*
Probab=100.00 E-value=1.3e-41 Score=334.06 Aligned_cols=276 Identities=27% Similarity=0.460 Sum_probs=229.0
Q ss_pred CCCCCCCCCCEEEEEEeeeeecCCCCCCcEEEEEEEeCCCCcccCCCCeEEEeccCCHHHHHHHHHHhCCCCCcEEEEee
Q 014169 20 GNASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKLLGQSLELLFSLHT 99 (429)
Q Consensus 20 ~~~~~~~~~~~~~~v~~~~~Lt~~~~~~~~~~i~l~~~~~~~~y~~GD~l~v~p~N~~~~V~~~l~~l~~~~~~~~~~~~ 99 (429)
....|+..+++.++|++++.+++.++.+++++|+|+.++ .+.|+||+++.|.++|..
T Consensus 28 ~~~~~~~~~~~~~~V~~~~~lt~~~~~~~v~~l~l~~~~-~~~~~pGQ~v~l~~~~~~---------------------- 84 (314)
T 1fnb_A 28 TVNKFKPKTPYVGRCLLNTKITGDDAPGETWHMVFSHEG-EIPYREGQSVGVIPDGED---------------------- 84 (314)
T ss_dssp CCCSBBTTBCEEEEEEEEEECSCSSSSSCEEEEEEECTT-CCCCCTTCEEEEECSSBC----------------------
T ss_pred CccccCCCCCEEEEEEEEEEecCCCCCCcEEEEEEecCC-CCCcCCCCEEEEecCCCC----------------------
Confidence 345678889999999999999998888999999999876 488999999999877530
Q ss_pred CCCCCCCCCCCCCCCCCCcccHHHHHhhhcccCCCCCHHHHHHHHHhCCCHHHHHHHHhccCCCChhHHHHHHHhcCCCH
Q 014169 100 DNEDGTPRGSSLTPPFPGPCTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFLSSPQGKDDYSQWVVASQRSL 179 (429)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~tl~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~s~~g~~~~~~~~~~~~~~~ 179 (429)
.+|
T Consensus 85 --------------------------------------------------------------~~g--------------- 87 (314)
T 1fnb_A 85 --------------------------------------------------------------KNG--------------- 87 (314)
T ss_dssp --------------------------------------------------------------TTS---------------
T ss_pred --------------------------------------------------------------cCC---------------
Confidence 000
Q ss_pred HHHHHhCCCCCCChHHHHHhhcCCCCCceeecCCCCCC---CCCeeEEEEEEEEccCCCCCcccCcccHHhhhcCCCCCC
Q 014169 180 LEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRF---APDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGN 256 (429)
Q Consensus 180 ~dvl~~f~~~~~~~gq~l~~~~p~~~pR~YSIaSsp~~---~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~~l~~G~~~ 256 (429)
.+..+|+|||+|+|.. .++.++|+|+.+.|.++.|+.+.|.+|+||+++++|+
T Consensus 88 ----------------------~~~~~R~ySi~s~p~~~~~~~~~~~l~Vk~~~y~~~~g~~~~G~~S~~L~~l~~Gd-- 143 (314)
T 1fnb_A 88 ----------------------KPHKLRLYSIASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDLKPGA-- 143 (314)
T ss_dssp ----------------------SBCCCEEEECCSCSSCTTSSSCEEEEEEECCEEECTTSCEEECHHHHHHHHCCTTC--
T ss_pred ----------------------CcCCceeEecCCCCcccCCCCCEEEEEEEEEEeccCCCCcCCCchhhHhhcCCCCC--
Confidence 0146899999999863 2578999999887776666667899999999999998
Q ss_pred CCccEEEEEEeCCCcc-CCCCCCCCEEEEccCcccchhHHHHHHHHHHhhcC-CCCCCeEEEEecccCCcccccHHHHHH
Q 014169 257 GDCSWAPIFIRPSNFK-LPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDG-AQLGPALLFFGCRNRRMDFIYEDELNN 334 (429)
Q Consensus 257 ~~~~~v~v~~p~g~F~-lp~~~~~pii~Ia~GtGIAP~~s~l~~~~~~~~~~-~~~~~~~L~~G~R~~~~d~ly~~eL~~ 334 (429)
.|.|.+|.|.|. ++.+..+|+||||+|||||||++|++++......+ ...++++||||||+.+ |++|.+||++
T Consensus 144 ----~v~v~gP~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~~~~~~v~L~~g~R~~~-d~~~~~el~~ 218 (314)
T 1fnb_A 144 ----EVKLTGPVGKEMLMPKDPNATIIMLGTGTGIAPFRSFLWKMFFEKHDDYKFNGLAWLFLGVPTSS-SLLYKEEFEK 218 (314)
T ss_dssp ----EEEEEEEECSTTCCBSCTTCEEEEEEEGGGGHHHHHHHHHHHTCCBTTBCCCSEEEEEEEESSGG-GCCSHHHHHH
T ss_pred ----EEEEEeccCCceeCCCCCCCCEEEEeCCccHHHHHHHHHHHHHhccccccCCCCEEEEEecCCHH-HhhhHHHHHH
Confidence 999999999764 55545689999999999999999999987521100 0146799999999998 9999999999
Q ss_pred HHHcCC-ccEEEEEEecCCC----CccchhhhHHHhHHHHHHhhc-CCcEEEEeCCCchhHHHHHHHHHHHHHHccCCCH
Q 014169 335 FEEEGV-ISELILAFSREGS----QKEYVQHKMMDKAAQLWSLLS-KEGYLYVCGDAKGMARDVHRTLHTIVQEQENVDS 408 (429)
Q Consensus 335 ~~~~~~-~~~l~~a~Sr~~~----~k~yvq~~l~~~~~~l~~~l~-~~~~vyvCGp~~~M~~~v~~~L~~i~~~~~~~~~ 408 (429)
+++.+. ++++++++|+++. .++||+++|.+..+.+++.+. .++.||+||| ++|+++|.++|.+++.+.+ .
T Consensus 219 l~~~~~~~~~~~~~~s~~~~~~~g~~~~v~~~l~~~~~~~~~~~~~~~~~vyvCGp-~~m~~~v~~~L~~~~~~~g-~-- 294 (314)
T 1fnb_A 219 MKEKAPDNFRLDFAVSREQTNEKGEKMYIQTRMAQYAVELWEMLKKDNTYVYMCGL-KGMEKGIDDIMVSLAAAEG-I-- 294 (314)
T ss_dssp HHHHCTTTEEEEEEETTTCBCTTCCBCCHHHHHHTTHHHHHHHTTSTTEEEEEEEC-TTHHHHHHHHHHHHHHTTT-C--
T ss_pred HHHhCCCcEEEEEEECCCCcccCCCceechHHHHHhHHHHHHHHhcCCeEEEEECC-HHHHHHHHHHHHHHHHHhC-c--
Confidence 988765 6789999999754 478999999887767766564 5789999999 8999999999999998754 3
Q ss_pred HHHHHHHHHHHHCCCeEEeeC
Q 014169 409 SKAESIVKKFQMEGRYLRDVW 429 (429)
Q Consensus 409 ~~a~~~~~~l~~~~Ry~~dvw 429 (429)
+|++++++|+++|||++|+|
T Consensus 295 -~~~~~~~~l~~~~r~~~d~~ 314 (314)
T 1fnb_A 295 -DWIEYKRQLKKAEQWNVEVY 314 (314)
T ss_dssp -CHHHHHHHHHHTTCEEEEEC
T ss_pred -hHHHHHHHHHHCCcEEEecC
Confidence 47899999999999999999
No 10
>2bmw_A Ferredoxin--NADP reductase; oxidoreductase, flavoprotein, FAD, FNR, reductase reductase, phycobilisome, thylakoid; HET: FAD; 1.5A {Anabaena SP} SCOP: b.43.4.2 c.25.1.1 PDB: 1h42_A* 2vyq_A* 2vzl_A* 1ogi_A* 1ogj_A* 1gjr_A* 1e62_A* 1e64_A* 1quf_A* 1e63_A* 1go2_A* 1w34_A* 1b2r_A* 1w35_A* 1w87_A* 1que_A* 1ewy_A* 1gr1_A* 2bsa_A* 1bqe_A* ...
Probab=100.00 E-value=1.6e-41 Score=331.78 Aligned_cols=277 Identities=24% Similarity=0.406 Sum_probs=229.1
Q ss_pred CCCCCCCCCCEEEEEEeeeeecCCCCCCcEEEEEEEeCCCCcccCCCCeEEEeccCCHHHHHHHHHHhCCCCCcEEEEee
Q 014169 20 GNASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKLLGQSLELLFSLHT 99 (429)
Q Consensus 20 ~~~~~~~~~~~~~~v~~~~~Lt~~~~~~~~~~i~l~~~~~~~~y~~GD~l~v~p~N~~~~V~~~l~~l~~~~~~~~~~~~ 99 (429)
....|+..+|+.++|+++++|++.++++++++|+|++++..+.|+||+++.|.++|...
T Consensus 12 ~~~~~~~~~~~~~~V~~~~~l~~~~~~~~v~~l~~~~~~~~~~~~pGQ~v~l~~~~~~~--------------------- 70 (304)
T 2bmw_A 12 PVNLYRPNAPFIGKVISNEPLVKEGGIGIVQHIKFDLTGGNLKYIEGQSIGIIPPGVDK--------------------- 70 (304)
T ss_dssp CCCSBBTTBCEEEEEEEEEECSCTTCSSCEEEEEEECTTSCCCCCTTCEEEEECSSBCT---------------------
T ss_pred cccccCCCCCEEEEEEEEEEecCCCCCCcEEEEEEecCCCccccCCCCEEEEEcCCCcc---------------------
Confidence 45678889999999999999999889999999999998656899999999998876310
Q ss_pred CCCCCCCCCCCCCCCCCCcccHHHHHhhhcccCCCCCHHHHHHHHHhCCCHHHHHHHHhccCCCChhHHHHHHHhcCCCH
Q 014169 100 DNEDGTPRGSSLTPPFPGPCTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFLSSPQGKDDYSQWVVASQRSL 179 (429)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~tl~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~s~~g~~~~~~~~~~~~~~~ 179 (429)
+|
T Consensus 71 ---------------------------------------------------------------~g--------------- 72 (304)
T 2bmw_A 71 ---------------------------------------------------------------NG--------------- 72 (304)
T ss_dssp ---------------------------------------------------------------TS---------------
T ss_pred ---------------------------------------------------------------cC---------------
Confidence 00
Q ss_pred HHHHHhCCCCCCChHHHHHhhcCCCCCceeecCCCCCC---CCCeeEEEEEEEEccCCC-CCcccCcccHHhhhcCCCCC
Q 014169 180 LEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRF---APDRVHVTCALVYGPTPT-GRIHKGVCSTWMKNAIPLEG 255 (429)
Q Consensus 180 ~dvl~~f~~~~~~~gq~l~~~~p~~~pR~YSIaSsp~~---~~~~i~l~v~~v~~~~~~-g~~~~G~~S~~L~~l~~G~~ 255 (429)
.+..+|+|||+|+|.. .++.++|+|+.+.|.+|. ++.+.|.+|+||+++++|+
T Consensus 73 ----------------------~~~~~R~ySias~~~~~~~~~~~l~l~Vk~~~y~~~~~~~~~~G~~S~~L~~l~~Gd- 129 (304)
T 2bmw_A 73 ----------------------KPEKLRLYSIASTRHGDDVDDKTISLCVRQLEYKHPESGETVYGVCSTYLTHIEPGS- 129 (304)
T ss_dssp ----------------------CBCCCEEEEBCSCTTTTTTSSSEEEEEEECCEECSSSSSSCEECHHHHHHHTCCTTC-
T ss_pred ----------------------CCCCCcceecCCCCcccCCCCCEEEEEEEEEEeeccccCcCCCcchhhHHhcCCCCC-
Confidence 0136899999999853 257899999987776543 3446799999999999998
Q ss_pred CCCccEEEEEEeCCCc-cCCCCCCCCEEEEccCcccchhHHHHHHHHHHhhc--C---CCCCCeEEEEecccCCcccccH
Q 014169 256 NGDCSWAPIFIRPSNF-KLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQD--G---AQLGPALLFFGCRNRRMDFIYE 329 (429)
Q Consensus 256 ~~~~~~v~v~~p~g~F-~lp~~~~~pii~Ia~GtGIAP~~s~l~~~~~~~~~--~---~~~~~~~L~~G~R~~~~d~ly~ 329 (429)
.|.|.+|.|.| .++.+..+|+||||+|||||||+||+++++..... + ...++++||||||+.+ |++|.
T Consensus 130 -----~v~v~gP~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~~~~~~~~~~v~l~~g~r~~~-d~~~~ 203 (304)
T 2bmw_A 130 -----EVKITGPVGKEMLLPDDPEANVIMLAGGTGITPMRTYLWRMFKDAERAANPEYQFKGFSWLVFGVPTTP-NILYK 203 (304)
T ss_dssp -----EEEEEEEECSSSCCCSCTTCEEEEEEEGGGHHHHHHHHHHHHCHHHHHHCTTCCCCSCEEEEEEESSGG-GCTTH
T ss_pred -----EEEEEeccCCceeCCCCCCCCEEEEecCccHHHHHHHHHHHHHhhhhhcccccccCCCEEEEEEeCChH-hcchH
Confidence 99999999965 46655568999999999999999999988753211 0 0136899999999988 99999
Q ss_pred HHHHHHHHcCC-ccEEEEEEecCCC----CccchhhhHHHhHHHHHHhhc-CCcEEEEeCCCchhHHHHHHHHHHHHHHc
Q 014169 330 DELNNFEEEGV-ISELILAFSREGS----QKEYVQHKMMDKAAQLWSLLS-KEGYLYVCGDAKGMARDVHRTLHTIVQEQ 403 (429)
Q Consensus 330 ~eL~~~~~~~~-~~~l~~a~Sr~~~----~k~yvq~~l~~~~~~l~~~l~-~~~~vyvCGp~~~M~~~v~~~L~~i~~~~ 403 (429)
+||+++++.+. ++++++++||++. .++|+++++.+..+.+++++. .++.||+||| ++|+++|+++|.+++.+.
T Consensus 204 ~el~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~v~~~l~~~~~~l~~~~~~~~~~vyvCGp-~~m~~~v~~~l~~~~~~~ 282 (304)
T 2bmw_A 204 EELEEIQQKYPDNFRLTYAISREQKNPQGGRMYIQDRVAEHADQLWQLIKNQKTHTYICGP-PPMEEGIDAALSAAAAKE 282 (304)
T ss_dssp HHHHHHHHHCTTTEEEEEEETTTCBCTTSSBCCHHHHHHHTHHHHHHHHTSTTEEEEEEEC-TTHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCcEEEEEEEcCCCCCCCCCcceehHHHHHhHHHHHHHhhcCCcEEEEECC-HHHHHHHHHHHHHHHHHc
Confidence 99999988764 6789999999753 478999999887777777664 4678999999 899999999999998764
Q ss_pred cCCCHHHHHHHHHHHHHCCCeEEeeC
Q 014169 404 ENVDSSKAESIVKKFQMEGRYLRDVW 429 (429)
Q Consensus 404 ~~~~~~~a~~~~~~l~~~~Ry~~dvw 429 (429)
|++ +++++++|+++|||++|+|
T Consensus 283 -g~~---~~~~~~~m~~~~ry~~e~~ 304 (304)
T 2bmw_A 283 -GVT---WSDYQKDLKKAGRWHVETY 304 (304)
T ss_dssp -TCC---HHHHHHHHHHTTCEEEEEC
T ss_pred -Ccc---HHHHHHHHHHcCCeEEecC
Confidence 454 7889999999999999999
No 11
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A*
Probab=100.00 E-value=2.3e-40 Score=324.71 Aligned_cols=276 Identities=26% Similarity=0.451 Sum_probs=231.7
Q ss_pred CCCCCCCCCCEEEEEEeeeeecCCCCCCcEEEEEEEeCCCCcccCCCCeEEEeccCCHHHHHHHHHHhCCCCCcEEEEee
Q 014169 20 GNASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKLLGQSLELLFSLHT 99 (429)
Q Consensus 20 ~~~~~~~~~~~~~~v~~~~~Lt~~~~~~~~~~i~l~~~~~~~~y~~GD~l~v~p~N~~~~V~~~l~~l~~~~~~~~~~~~ 99 (429)
....|....|+.++|++++.++..+...++++|+|+.+. .+.|+||.++.|.++...
T Consensus 24 ~~~~~~p~~~~~~~V~~~~~l~~~~~~~~v~~l~l~~~~-~~~~~pGQ~v~l~~~~~~---------------------- 80 (310)
T 3vo2_A 24 VTNKYKPKEPYVGRCLSNTRITGDDAPGETWHMVFSTEG-EIPYREGQSIGIIADGED---------------------- 80 (310)
T ss_dssp CCCSBBTTBCEEEEEEEEEECSCSSSSSCEEEEEEECTT-CCCCCTTCEEEEECSSBC----------------------
T ss_pred ceeeecCCCCEEEEEEEEEEccCCCCCccEEEEEEeCCC-CCcccCCCEEEEECCCcC----------------------
Confidence 556789999999999999999987777889999999764 688999999998764210
Q ss_pred CCCCCCCCCCCCCCCCCCcccHHHHHhhhcccCCCCCHHHHHHHHHhCCCHHHHHHHHhccCCCChhHHHHHHHhcCCCH
Q 014169 100 DNEDGTPRGSSLTPPFPGPCTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFLSSPQGKDDYSQWVVASQRSL 179 (429)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~tl~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~s~~g~~~~~~~~~~~~~~~ 179 (429)
.+|
T Consensus 81 --------------------------------------------------------------~~g--------------- 83 (310)
T 3vo2_A 81 --------------------------------------------------------------KNG--------------- 83 (310)
T ss_dssp --------------------------------------------------------------TTS---------------
T ss_pred --------------------------------------------------------------CCC---------------
Confidence 000
Q ss_pred HHHHHhCCCCCCChHHHHHhhcCCCCCceeecCCCCCC---CCCeeEEEEEEEEccCCCCCcccCcccHHhhhcCCCCCC
Q 014169 180 LEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRF---APDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGN 256 (429)
Q Consensus 180 ~dvl~~f~~~~~~~gq~l~~~~p~~~pR~YSIaSsp~~---~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~~l~~G~~~ 256 (429)
-++.+|+|||+|+|.. .++.++|+|+++.|.++.|+.+.|.+|+||+++++|+
T Consensus 84 ----------------------~~~~~R~ySias~p~~~~~~~~~~~l~Vk~~~~~~~~~~~~~G~~S~~L~~l~~Gd-- 139 (310)
T 3vo2_A 84 ----------------------KPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNDQGEIVKGVCSNFLCDLKPGA-- 139 (310)
T ss_dssp ----------------------CBCCCEEEECCSCTTTTTTSSSEEEEEEECCEEECTTSCEEECHHHHHHHTCCTTC--
T ss_pred ----------------------CcCcceeeecCCCCcccCCCCCEEEEEEEEEEeccCCCCcCCcchhhHHhcCCCCC--
Confidence 1135899999999963 3578999999988877777778899999999999998
Q ss_pred CCccEEEEEEeCCCcc-CCCCCCCCEEEEccCcccchhHHHHHHHHHHhhcC-CCCCCeEEEEecccCCcccccHHHHHH
Q 014169 257 GDCSWAPIFIRPSNFK-LPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDG-AQLGPALLFFGCRNRRMDFIYEDELNN 334 (429)
Q Consensus 257 ~~~~~v~v~~p~g~F~-lp~~~~~pii~Ia~GtGIAP~~s~l~~~~~~~~~~-~~~~~~~L~~G~R~~~~d~ly~~eL~~ 334 (429)
.|.+.+|.|.|. +|.+..+|+||||||||||||++|++++......+ ...++++||||||+.+ |++|.+||++
T Consensus 140 ----~v~v~gP~G~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~~~~~~v~L~~g~r~~~-d~~~~~el~~ 214 (310)
T 3vo2_A 140 ----DVKITGPVGKEMLMPKDPNATVIMLATGTGIAPFRSFLWKMFLEEHEDYKFSGLAWLFLGVPTSD-SLLYKEELEK 214 (310)
T ss_dssp ----EEEEEEEECSTTCCBSCTTCEEEEEEEGGGGHHHHHHHHHHHSSCCTTCCCCSEEEEEEEESSGG-GCCSHHHHHH
T ss_pred ----EEEEEeccCCcccCCCCCCCCEEEEeCCcchhHHHHHHHHHHHhhcccccCCCcEEEEEEecChh-hcccHHHHHH
Confidence 999999999655 55556789999999999999999999987521110 0136899999999998 9999999999
Q ss_pred HHHcCC-ccEEEEEEecCCC----CccchhhhHHHhHHHHHHhhc-CCcEEEEeCCCchhHHHHHHHHHHHHHHccCCCH
Q 014169 335 FEEEGV-ISELILAFSREGS----QKEYVQHKMMDKAAQLWSLLS-KEGYLYVCGDAKGMARDVHRTLHTIVQEQENVDS 408 (429)
Q Consensus 335 ~~~~~~-~~~l~~a~Sr~~~----~k~yvq~~l~~~~~~l~~~l~-~~~~vyvCGp~~~M~~~v~~~L~~i~~~~~~~~~ 408 (429)
+++.+. ++++++++||++. .++||++++.+..+.+++++. +++.||+||| ++|+++|+++|.+++.+.+ +
T Consensus 215 l~~~~~~~~~v~~~~sr~~~~~~g~~~~v~~~l~~~~~~l~~~l~~~~~~vyvCGp-~~M~~~v~~~L~~~~~~~g-~-- 290 (310)
T 3vo2_A 215 MKEMAPDNFRLDFAVSREQTNAAGEKMYIQTRMAEYREELWELLKKDNTYVYMCGL-KGMEKGIDDIMLNLAAKDG-I-- 290 (310)
T ss_dssp HHHHCTTTEEEEEEETTTCBCTTCCBCCHHHHHHTTHHHHHHHHTSTTEEEEEEES-TTHHHHHHHHHHHHHHHTT-C--
T ss_pred HHHhCCCCEEEEEEECCCCCCCCCcceehHHHHHHHHHHHHHhcccCCcEEEEeCC-HHHHHHHHHHHHHHHHHcC-c--
Confidence 998865 7789999999864 578999999988888887774 5789999999 8999999999999998764 4
Q ss_pred HHHHHHHHHHHHCCCeEEeeC
Q 014169 409 SKAESIVKKFQMEGRYLRDVW 429 (429)
Q Consensus 409 ~~a~~~~~~l~~~~Ry~~dvw 429 (429)
++++|+++|+++|||++|||
T Consensus 291 -~~~~~~~~l~~~~r~~~e~y 310 (310)
T 3vo2_A 291 -DWMQYKKQLKKGEQWNVEVY 310 (310)
T ss_dssp -CHHHHHHHHHHTTSEEEEEC
T ss_pred -CHHHHHHHHHHCCceEEecC
Confidence 48999999999999999999
No 12
>2b5o_A FNR, ferredoxin--NADP reductase; complex with FAD, oxidoreductase; HET: FAD; 2.50A {Synechococcus SP}
Probab=100.00 E-value=7.5e-40 Score=331.88 Aligned_cols=274 Identities=25% Similarity=0.399 Sum_probs=227.4
Q ss_pred CCCCCCCEEEEEEeeeeecCCCCCCcEEEEEEEeCCCCcccCCCCeEEEeccCCHHHHHHHHHHhCCCCCcEEEEeeCCC
Q 014169 23 SFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKLLGQSLELLFSLHTDNE 102 (429)
Q Consensus 23 ~~~~~~~~~~~v~~~~~Lt~~~~~~~~~~i~l~~~~~~~~y~~GD~l~v~p~N~~~~V~~~l~~l~~~~~~~~~~~~~~~ 102 (429)
.|...+|+.++|++++++++.++.+++++|+|+.++..+.|+||+++.|.+++..
T Consensus 116 ~~~~~~~~~~~V~~~~~lt~~~~~~~v~~l~l~~~~~~~~~~pGQ~v~l~~~~~~------------------------- 170 (402)
T 2b5o_A 116 IYRPKTPFLGKCIENYELVDEGGSGTVRHVTFDISEGDLRYLEGQSIGIIPPGED------------------------- 170 (402)
T ss_dssp SSCSSSCEEEEEEEEEECSCTTCCSCEEEEEEECTTSCCCCCTTCEEEEECSSEE-------------------------
T ss_pred cccCCCCEEEEEEEEEEcCCCCCCCcEEEEEEECCCCCCCcCCCCEEEEEecCCC-------------------------
Confidence 4678889999999999999988888999999998865589999999999876520
Q ss_pred CCCCCCCCCCCCCCCcccHHHHHhhhcccCCCCCHHHHHHHHHhCCCHHHHHHHHhccCCCChhHHHHHHHhcCCCHHHH
Q 014169 103 DGTPRGSSLTPPFPGPCTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFLSSPQGKDDYSQWVVASQRSLLEV 182 (429)
Q Consensus 103 ~~~~~~~~~~~~~~~~~tl~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~s~~g~~~~~~~~~~~~~~~~dv 182 (429)
.+|
T Consensus 171 -----------------------------------------------------------~~g------------------ 173 (402)
T 2b5o_A 171 -----------------------------------------------------------KNG------------------ 173 (402)
T ss_dssp -----------------------------------------------------------TTT------------------
T ss_pred -----------------------------------------------------------cCC------------------
Confidence 000
Q ss_pred HHhCCCCCCChHHHHHhhcCCCCCceeecCCCCCC---CCCeeEEEEEEEEccCCC-CCcccCcccHHhhhcCCC-CCCC
Q 014169 183 MAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRF---APDRVHVTCALVYGPTPT-GRIHKGVCSTWMKNAIPL-EGNG 257 (429)
Q Consensus 183 l~~f~~~~~~~gq~l~~~~p~~~pR~YSIaSsp~~---~~~~i~l~v~~v~~~~~~-g~~~~G~~S~~L~~l~~G-~~~~ 257 (429)
.+..+|+|||+|+|.. .++.++|+|+++.|.+|. ++.+.|.+|+||+++++| +
T Consensus 174 -------------------~~~~~R~ySIas~p~~~~~~~~~l~l~Vk~~~y~~~~~~~~~~G~~S~~L~~l~~G~d--- 231 (402)
T 2b5o_A 174 -------------------KPHKLRLYSIASTRHGDMEDNKTVSLCVRQLEYQDPESGETVYGVCSTYLCNLPVGTD--- 231 (402)
T ss_dssp -------------------EECCCEEEEBCSCTTTTTTSSCEEEEEEECCEEECTTTCCEEECHHHHHHHTCCTTCC---
T ss_pred -------------------CccCceeeeccCCCccccCCCCEEEEEEEEeeecccccCcCCCCchhHHHhhCCCCCc---
Confidence 0136899999999863 257899999987666532 344679999999999999 9
Q ss_pred CccEEEEEEeCCCc-cCCCCCCCCEEEEccCcccchhHHHHHHHHHHhhcC-CCCCCeEEEEecccCCcccccHHHHHHH
Q 014169 258 DCSWAPIFIRPSNF-KLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDG-AQLGPALLFFGCRNRRMDFIYEDELNNF 335 (429)
Q Consensus 258 ~~~~v~v~~p~g~F-~lp~~~~~pii~Ia~GtGIAP~~s~l~~~~~~~~~~-~~~~~~~L~~G~R~~~~d~ly~~eL~~~ 335 (429)
.|.|.+|.|.| .++.+..+|+||||||||||||++|++++......+ ...++++||||||+.+ |++|.+||+++
T Consensus 232 ---~v~v~gP~G~~~~l~~~~~~~vvlIAgGtGIaP~~s~l~~l~~~~~~~~~~~~~v~L~~g~R~~~-d~~~~~eL~~l 307 (402)
T 2b5o_A 232 ---DVKITGPVGKEMLLPDDEDATVVMLATGTGIAPFRAFLWRMFKEQHEDYKFKGKAWLIFGVPYTA-NILYKDDFEKM 307 (402)
T ss_dssp ---CEEEEEEECSTTCCCSCTTCEEEEEEEGGGGHHHHHHHHHHHTCCCSSCCCCSEEEEEEEESSGG-GCTTHHHHHHH
T ss_pred ---eEEEEcccCCcccCCccCCCCEEEEEcccCHHHHHHHHHHHHHhccccccccCCEEEEEecCCHH-HhHHHHHHHHH
Confidence 99999999965 566555789999999999999999999987521000 0136899999999998 99999999999
Q ss_pred HHcCC-ccEEEEEEecCCC----CccchhhhHHHhHHHHHHhhc-CCcEEEEeCCCchhHHHHHHHHHHHHHHccCCCHH
Q 014169 336 EEEGV-ISELILAFSREGS----QKEYVQHKMMDKAAQLWSLLS-KEGYLYVCGDAKGMARDVHRTLHTIVQEQENVDSS 409 (429)
Q Consensus 336 ~~~~~-~~~l~~a~Sr~~~----~k~yvq~~l~~~~~~l~~~l~-~~~~vyvCGp~~~M~~~v~~~L~~i~~~~~~~~~~ 409 (429)
++.+. ++++++++|+++. .++||+++|.+..+.+++++. .++.||+||| ++|+++|.++|.+++.+.+.
T Consensus 308 ~~~~~~~~~v~~~~S~~~~~~~g~~~~v~~~l~~~~~~l~~~l~~~~~~vyvCGP-~~M~~~v~~~L~~~g~~~g~---- 382 (402)
T 2b5o_A 308 AAENPDNFRLTYAISREQKTADGGKVYVQSRVSEYADELFEMIQKPNTHVYMCGL-KGMQPPIDETFTAEAEKRGL---- 382 (402)
T ss_dssp HHHCTTTEEEEEEETTTCBCTTSCBCCHHHHHHHTHHHHHHHHTSTTEEEEEEEC-GGGHHHHHHHHHHHHHHTTC----
T ss_pred HHhCCCcEEEEEEECCCCcccCCCccchHHHHHHhHHHHHHHhccCCcEEEEECC-HHHHHHHHHHHHHHHHHcCc----
Confidence 98765 7789999999753 478999999888777877774 5789999999 89999999999999988753
Q ss_pred HHHHHHHHHHHCCCeEEeeC
Q 014169 410 KAESIVKKFQMEGRYLRDVW 429 (429)
Q Consensus 410 ~a~~~~~~l~~~~Ry~~dvw 429 (429)
.+++++++|+++|||++|+|
T Consensus 383 ~~~~~~~~m~~~~Ry~~e~~ 402 (402)
T 2b5o_A 383 NWEEMRRSMKKEHRWHVEVY 402 (402)
T ss_dssp CHHHHHHHHHHTTCEEEEEC
T ss_pred hHHHHHHHHHHCCCEEEecC
Confidence 47899999999999999999
No 13
>2rc5_A Ferredoxin-NADP reductase; FAD, oxidoreductase; HET: FAD; 2.43A {Leptospira interrogans} PDB: 2rc6_A*
Probab=100.00 E-value=9.1e-39 Score=313.67 Aligned_cols=282 Identities=23% Similarity=0.324 Sum_probs=222.6
Q ss_pred CCCCCCCCCCEEEEEEeeeeecCCCCCCc---------EEEEEEEeCCCCcccCCCCeEEEeccCCHHHHHHHHHHhCCC
Q 014169 20 GNASFDIHHPCRVNVAVRRELHKPDSDRS---------CIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKLLGQS 90 (429)
Q Consensus 20 ~~~~~~~~~~~~~~v~~~~~Lt~~~~~~~---------~~~i~l~~~~~~~~y~~GD~l~v~p~N~~~~V~~~l~~l~~~ 90 (429)
....|.+.+|+.++|+++++|++.++.++ +++|+|+.++..+.|+||+++.|.++|....
T Consensus 12 ~~~~~~~~~~~~~~V~~~~~lt~~~~~~~~~~~e~~~~~~~l~l~~~~~~~~~~pGQ~v~l~~~~~~~~----------- 80 (314)
T 2rc5_A 12 QINLFKKSNPYKAKVISNVLLTPETGTGKRPKKEGEALVHRIVLAIDHSAYPYVIGQSGGVIPPGEDPE----------- 80 (314)
T ss_dssp CCCSBBTTBCEEEEEEEEEECSCCTTSSSCCSSSCCCCEEEEEEECCTTTCCCCTTCEEEEECSSBCHH-----------
T ss_pred ccCCCCCCCCEEEEEEEeEEcCCccccccccccccCceEEEEEEeCCCCcCcccCCCEEEEECCCCccc-----------
Confidence 34567888999999999999999877777 9999999886558999999999998774210
Q ss_pred CCcEEEEeeCCCCCCCCCCCCCCCCCCcccHHHHHhhhcccCCCCCHHHHHHHHHhCCCHHHHHHHHhccCCCChhHHHH
Q 014169 91 LELLFSLHTDNEDGTPRGSSLTPPFPGPCTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFLSSPQGKDDYSQ 170 (429)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~s~~g~~~~~~ 170 (429)
+. +. .++
T Consensus 81 -------------g~------------~~--------------------------------------~~~---------- 87 (314)
T 2rc5_A 81 -------------KK------------AK--------------------------------------GLA---------- 87 (314)
T ss_dssp -------------HH------------HT--------------------------------------TCS----------
T ss_pred -------------cC------------cc--------------------------------------chh----------
Confidence 00 00 000
Q ss_pred HHHhcCCCHHHHHHhCCCCCCChHHHHHhhcCCCCCceeecCCCCCC---CCCeeEEEEEEEEccCCCCCc-ccCcccHH
Q 014169 171 WVVASQRSLLEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRF---APDRVHVTCALVYGPTPTGRI-HKGVCSTW 246 (429)
Q Consensus 171 ~~~~~~~~~~dvl~~f~~~~~~~gq~l~~~~p~~~pR~YSIaSsp~~---~~~~i~l~v~~v~~~~~~g~~-~~G~~S~~ 246 (429)
+| | +.+|+|||+|+|.. .++.++|+|+++.+.++.|+. +.|.+|+|
T Consensus 88 --------------~~---------------~-~~~R~ySi~s~p~~~~~~~~~l~l~vk~~~~~~~~g~~~~~G~~S~~ 137 (314)
T 2rc5_A 88 --------------DV---------------G-YTVRLYSIASPSYSFGMKEDNIEFIIKRDNIYDENGNIQFKGVCSNY 137 (314)
T ss_dssp --------------CC---------------B-CCCEEEECCSCTTCGGGCCCEEEEEEECCBCC--CCSCSSBCHHHHH
T ss_pred --------------hc---------------C-CCceeeeccCCccccCCCCCEEEEEEEEEeecCCCCCcCCCcchHHH
Confidence 11 1 57899999999852 357899999987665555543 56999999
Q ss_pred hhhcCCCCCCCCccEEEEEEeCCCcc-CCC-CCCCCEEEEccCcccchhHHHHHHHHHHhhcCCCCCCeEEEEecccCCc
Q 014169 247 MKNAIPLEGNGDCSWAPIFIRPSNFK-LPA-NPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRM 324 (429)
Q Consensus 247 L~~l~~G~~~~~~~~v~v~~p~g~F~-lp~-~~~~pii~Ia~GtGIAP~~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~ 324 (429)
|+++++|+ .|.|.+|.|.|. ++. +..+|+||||+|||||||++|++++..... ....++++||||+|+.+
T Consensus 138 L~~l~~Gd------~v~v~gP~G~~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~l~~~~~-~~~~~~v~l~~g~r~~~- 209 (314)
T 2rc5_A 138 MCDLKPGD------EVTMTGPSGKKFLLPNTDFSGDIMFLATGTGIAPFIGMSEELLEHKL-IKFTGNITLVYGAPYSD- 209 (314)
T ss_dssp HHTCCTTC------EEEEEEEECSSSCCCSSCBCSCEEEEEEGGGGHHHHHHHHHHHTTCS-SCBCSCEEEEEEESSGG-
T ss_pred HhcCCCcC------EEEEEeccCCceeCCCCCCCCCEEEEECCccHHHHHHHHHHHHHhcc-cCCCCcEEEEEEeCCHH-
Confidence 99999998 999999999765 454 356899999999999999999999875210 01236899999999999
Q ss_pred ccccHHHHHHHHHcCCccEEEEEEecCCC-----CccchhhhHHHhHHHHHHhhcCCcEEEEe-CCCchhHHHHHHHHHH
Q 014169 325 DFIYEDELNNFEEEGVISELILAFSREGS-----QKEYVQHKMMDKAAQLWSLLSKEGYLYVC-GDAKGMARDVHRTLHT 398 (429)
Q Consensus 325 d~ly~~eL~~~~~~~~~~~l~~a~Sr~~~-----~k~yvq~~l~~~~~~l~~~l~~~~~vyvC-Gp~~~M~~~v~~~L~~ 398 (429)
|++|.+||+++++.+.++++++++||+.. .++||++++.+..+.+.+.+.+...+|+| || ++|+++|++.|.+
T Consensus 210 d~~~~~el~~l~~~~~~~~~~~~~s~~~~~~~~g~~~~v~~~l~~~~~~l~~~~~~~~~~yvCGGp-~~m~~~v~~~L~~ 288 (314)
T 2rc5_A 210 ELVMMDYLKGLESKHKNFKLITAISREEKNSFDGGRMYISHRVREQAEAVKKILNGGGRFYICGGP-KGMEKGVIEEIQK 288 (314)
T ss_dssp GSCSHHHHHHHHHHHSSEEEEEEETTTCBCTTTSSBCCHHHHHHHTHHHHHHHHHHTCEEEEEESS-TTTHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHhCCcEEEEEEECCCCCcccCCCceehhHHHHHhHHHHHHHhhcCCeEEEeCCc-HHHHHHHHHHHHH
Confidence 99999999999877557789999999743 36899999988766666655333345999 99 8999999999999
Q ss_pred HHHHccCCCHHHHHHHHHHHHHCCCeEEeeC
Q 014169 399 IVQEQENVDSSKAESIVKKFQMEGRYLRDVW 429 (429)
Q Consensus 399 i~~~~~~~~~~~a~~~~~~l~~~~Ry~~dvw 429 (429)
++. .++. ++.|+.+|+++|||++|+|
T Consensus 289 ~g~--~~i~---~e~f~~~l~~~gr~~~e~~ 314 (314)
T 2rc5_A 289 ISG--NTGT---YEEFKHHLEGAHQLFVETY 314 (314)
T ss_dssp HHT--CCSC---HHHHHHHHHHTTCEEEEEC
T ss_pred HHh--ccch---HHHHHHHHHHCCCEEEecC
Confidence 876 3333 7889999999999999999
No 14
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=100.00 E-value=2.5e-38 Score=310.12 Aligned_cols=229 Identities=24% Similarity=0.382 Sum_probs=188.2
Q ss_pred CCCChHHHHHhhcCCC---------CCceeecCCCCCC---CCCeeEEEEEEEEccCCCC----CcccCcccHHhhhcCC
Q 014169 189 ATPPIGVFFAAVAPHL---------QPRYYSISSSPRF---APDRVHVTCALVYGPTPTG----RIHKGVCSTWMKNAIP 252 (429)
Q Consensus 189 ~~~~~gq~l~~~~p~~---------~pR~YSIaSsp~~---~~~~i~l~v~~v~~~~~~g----~~~~G~~S~~L~~l~~ 252 (429)
..+.+|||+.+.+|.. .+|+|||+|+|.. .++.++|+|+++.+..+.. +.+.|.+|+||+++++
T Consensus 59 ~~~~pGQ~v~l~~~~~~~~~~g~~~~~R~ySias~p~~~~~~~~~~~l~Vk~~~~~~~~~~~~~~~~~G~~S~~L~~l~~ 138 (311)
T 3lo8_A 59 VPYWEGQSYGVIPPGENPKKPGAPQNVRLYSIASTRYGDNFDGRTGSLCVRRAVYYDPETGKEDPSKNGVCSNFLCNSKP 138 (311)
T ss_dssp SCCCTTCEEEEECSSBCTTSTTCBCCCEEEEBCSCTTTTTTSSSEEEEEEECCCCCCTTTCCCCGGGSCHHHHHHHTCCT
T ss_pred CcccCCCEEEEeCCCCccccCCCCCCceeeEecCCCcccCCCCCEEEEEEEEEEecccccCcCCcCCCCchhhHHhcCCC
Confidence 4568999999987753 6899999999964 2478999999764433321 1367999999999999
Q ss_pred CCCCCCccEEEEEEeCCCccCCC--CCCCCEEEEccCcccchhHHHHHHHHHHhhcC-CCCCCeEEEEecccCCcccccH
Q 014169 253 LEGNGDCSWAPIFIRPSNFKLPA--NPSVPIIMVGPGTGLAPFRGFLQERMALKQDG-AQLGPALLFFGCRNRRMDFIYE 329 (429)
Q Consensus 253 G~~~~~~~~v~v~~p~g~F~lp~--~~~~pii~Ia~GtGIAP~~s~l~~~~~~~~~~-~~~~~~~L~~G~R~~~~d~ly~ 329 (429)
|+ .|.+.+|.|.|.+.. +..+|+||||||||||||++|+++++.....+ ...++++||||+|+.+ |++|.
T Consensus 139 Gd------~v~v~gP~G~~~~~~~~~~~~~~vlIagGtGIaP~~s~l~~~~~~~~~~~~~~~~v~l~~g~r~~~-d~~~~ 211 (311)
T 3lo8_A 139 GD------KIQLTGPSGKIMLLPEEDPNATHIMIATGTGVAPFRGYLRRMFMEDVPNYRFGGLAWLFLGVANSD-SLLYD 211 (311)
T ss_dssp TC------EEEEEEEECCTTCCCCSCTTCEEEEEEEGGGGHHHHHHHHHHHTEECTTCCCCSEEEEEEEESSGG-GCSSH
T ss_pred cC------EEEEEeccCCcccCCCcCCCCCEEEEECCEEHHHHHHHHHHHHHhccccccCCCCEEEEEecCChH-HhhHH
Confidence 98 999999999776543 35689999999999999999999987631110 0136799999999998 99999
Q ss_pred HHHHHHHHcCC-ccEEEEEEecCCC----CccchhhhHHHhHHHHHHhhcCCcEEEEeCCCchhHHHHHHHHHHHHHHcc
Q 014169 330 DELNNFEEEGV-ISELILAFSREGS----QKEYVQHKMMDKAAQLWSLLSKEGYLYVCGDAKGMARDVHRTLHTIVQEQE 404 (429)
Q Consensus 330 ~eL~~~~~~~~-~~~l~~a~Sr~~~----~k~yvq~~l~~~~~~l~~~l~~~~~vyvCGp~~~M~~~v~~~L~~i~~~~~ 404 (429)
+||+++++.+. .+++++++|+++. .++||++.+.+..+.+++++..++.||+||| ++|+++|+++|.+++.+.+
T Consensus 212 ~el~~l~~~~~~~~~~~~~~s~~~~~~~g~~~~v~~~l~~~~~~~~~~~~~~~~vyvCGp-~~m~~~v~~~L~~~~~~~g 290 (311)
T 3lo8_A 212 EEFTSYLKQYPDNFRYDKALSREQKNRSGGKMYVQDKIEEYSDEIFKLLDGGAHIYFCGL-KGMMPGIQDTLKKVAERRG 290 (311)
T ss_dssp HHHHHHHHHCTTTEEEEEEETTTC-------CCHHHHHHHTHHHHHHHHHTTCEEEEEEC-GGGHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhCCCcEEEEEEECCCCcccCCCcceehHHHHHHHHHHHHhhcCCcEEEEECC-HHHHHHHHHHHHHHHHhcc
Confidence 99999998865 7789999999864 4789999998887777776667899999999 8999999999999997764
Q ss_pred CCCHHHHHHHHHHHHHCCCeEEeeC
Q 014169 405 NVDSSKAESIVKKFQMEGRYLRDVW 429 (429)
Q Consensus 405 ~~~~~~a~~~~~~l~~~~Ry~~dvw 429 (429)
++|++++++|+++|||++|+|
T Consensus 291 ----~~~~~~~~~l~~~~ry~~e~y 311 (311)
T 3lo8_A 291 ----ESWDQKLAQLKKNKQWHVEVY 311 (311)
T ss_dssp ----CCHHHHHHHHHHTTCEEEEEC
T ss_pred ----HHHHHHHHHHHHCCcEEEecC
Confidence 358899999999999999999
No 15
>3jqq_A Ferredoxin NADP reductase; FAD, oxidoreductase; HET: FAD A2P; 2.20A {Plasmodium falciparum} PDB: 2ok8_A* 2ok7_A* 3jqr_A* 3jqp_A*
Probab=100.00 E-value=1.6e-37 Score=305.17 Aligned_cols=294 Identities=20% Similarity=0.341 Sum_probs=214.4
Q ss_pred CCCCCCCCCCEEEEEEeeeeecCCCCCCcEEEEEEEeCCCCcccCCCCeEEEeccCCHHHHHHHHHHhCCCCCcEEEEee
Q 014169 20 GNASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENCDETVEEAGKLLGQSLELLFSLHT 99 (429)
Q Consensus 20 ~~~~~~~~~~~~~~v~~~~~Lt~~~~~~~~~~i~l~~~~~~~~y~~GD~l~v~p~N~~~~V~~~l~~l~~~~~~~~~~~~ 99 (429)
...-|..++|+.++|+++.+|+.++...+|+||+|+.++ .+.|.+|..++|.|+..+.. + .
T Consensus 6 ~~~~~~~~~p~~~~v~~~~~l~~~~~~~~v~~~~~~~~~-~~~~~~GQ~~~i~~~~~~~~----------~--~------ 66 (316)
T 3jqq_A 6 FINLYTVKNPLKCKIVDKINLVRPNSPNEVYHLEINHNG-LFKYLEGHTCGIIPYYNELD----------N--N------ 66 (316)
T ss_dssp CBTSSCSSSCEEEEEEEEEECSCTTCSCCEEEEEEECTT-CCCCCTTCEEEECTTCC-----------------------
T ss_pred ceeeecCCCCEEEEEEeeEEccCCCCCCceEEEEEeCCC-CcceecCcEeEEECCCcccc----------c--c------
Confidence 345789999999999999999999888999999999965 69999999999999876432 0 0
Q ss_pred CCCCCCCCCCCCCCCCCCcccHHHHHhhhcccCCCCCHHHHHHHHHhCCCHHHHHHHHhccCCCChhHHHHHHHhcCCCH
Q 014169 100 DNEDGTPRGSSLTPPFPGPCTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFLSSPQGKDDYSQWVVASQRSL 179 (429)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~tl~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l~s~~g~~~~~~~~~~~~~~~ 179 (429)
. ++ +.+.+- .++-++. ++ . +..+
T Consensus 67 --~-~~--------~~~~~~-------~~~~~~~------------~~---------~------------------h~~~ 89 (316)
T 3jqq_A 67 --P-NN--------QINKDH-------NIINTTN------------HT---------N------------------HNNI 89 (316)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --c-cc--------cccccc-------ccccccc------------cc---------c------------------cccc
Confidence 0 00 000000 0000000 00 0 0000
Q ss_pred HHHHHhCCCCCCChHHHHHhhcCCCCCceeecCCCCCCCCCeeEEEEEEEEccCC---CCCcccCcccHHhhhcCCCCCC
Q 014169 180 LEVMAEFPSATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTP---TGRIHKGVCSTWMKNAIPLEGN 256 (429)
Q Consensus 180 ~dvl~~f~~~~~~~gq~l~~~~p~~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~---~g~~~~G~~S~~L~~l~~G~~~ 256 (429)
+ -..+- +...+|+|||||+|.. +.++|+|+++.|..+ .++.+.|.+|+||+++++|+
T Consensus 90 ~---------------~~~~~-g~~~~R~ySIaS~p~~--~~l~l~Vk~~~y~~~~~~~~~~~~G~~S~~L~~l~~Gd-- 149 (316)
T 3jqq_A 90 A---------------LSHIK-KQRCARLYSISSSNNM--ENLSVAIKIHKYEQTENAPNITNYGYCSGFIKNLKIND-- 149 (316)
T ss_dssp -----------------------CCCCEEEEBCSCTTS--SSEEEEEECCBC---------CCBCHHHHHHHTCCTTC--
T ss_pred c---------------cccCC-CcccceeeecccCCCC--CeEEEEEEEEEecccccccCcCCCCchhHHHhhCCCCC--
Confidence 0 00111 4468999999999974 689999998766532 23456799999999999998
Q ss_pred CCccEEEEEEeCCCccCCCC---CCCCEEEEccCcccchhHHHHHHHHHHhhc------CCCCCCeEEEEecccCCcccc
Q 014169 257 GDCSWAPIFIRPSNFKLPAN---PSVPIIMVGPGTGLAPFRGFLQERMALKQD------GAQLGPALLFFGCRNRRMDFI 327 (429)
Q Consensus 257 ~~~~~v~v~~p~g~F~lp~~---~~~pii~Ia~GtGIAP~~s~l~~~~~~~~~------~~~~~~~~L~~G~R~~~~d~l 327 (429)
.|.|.+|.|.|.++.+ ..+|+||||||||||||+||++++...... +...++++||||+|+.+ |++
T Consensus 150 ----~v~v~gP~G~f~l~~~~~~~~~~vvlIAgGtGIaP~~sil~~l~~~~~~~~~~~~~~~~~~v~L~~g~R~~~-d~~ 224 (316)
T 3jqq_A 150 ----DIYLTGAHGYFNLPNDAIQKNTNFIFIATGTGISPYISFLKKLFAYDKNNLYNRNSNYTGYITIYYGVYNED-SIL 224 (316)
T ss_dssp ----EEEEEEEECCCCCCTTHHHHTCCEEEEEEGGGGHHHHHHHHHHTTCCGGGTTCCCCCCCCCEEEEEEESSGG-GCT
T ss_pred ----EEEEEecCCceEcCCcccCCCCcEEEEeCCceechHHHHHHHHHHhccccccccccCCCCcEEEEEEecCHH-Hhh
Confidence 9999999999999875 368999999999999999999998763110 01247899999999999 999
Q ss_pred cHHHHHHHHHcCC-ccEEEEEEecCCC---CccchhhhHHHhHHHHHHhhc-CCcEEEEeCCCchhHHHHHHHHHHHHHH
Q 014169 328 YEDELNNFEEEGV-ISELILAFSREGS---QKEYVQHKMMDKAAQLWSLLS-KEGYLYVCGDAKGMARDVHRTLHTIVQE 402 (429)
Q Consensus 328 y~~eL~~~~~~~~-~~~l~~a~Sr~~~---~k~yvq~~l~~~~~~l~~~l~-~~~~vyvCGp~~~M~~~v~~~L~~i~~~ 402 (429)
|.+||+++++... ++++++++||++. .++||++.+.+..+.+++++. .++.||+||| ++|++++.+.|.+.+
T Consensus 225 ~~~eL~~l~~~~~~~~~~~~~~s~~~~~~g~~g~V~~~l~~~~~~~~~~l~~~~~~vyvCGP-~~m~~~v~~~l~~~G-- 301 (316)
T 3jqq_A 225 YLNELEYFQKMYPNNINIHYVFSYKQNSDATSFYVQDEIYKRKTEFLNLFNNYKCELYICGK-KSIRYKVMDILKSHD-- 301 (316)
T ss_dssp THHHHHHHHHHCTTTEEEEEEEGGGCC---CBCCHHHHHHHTHHHHHHHHHHTCCEEEEEEC-STHHHHHHHHHHC----
T ss_pred cHHHHHHHHHhCCCcEEEEEEECCCcccCCCccchhHHHHHhHHHHHHhhccCCeEEEEeCC-HHHHHHHHHHHHHcC--
Confidence 9999999998765 6789999999853 578999999988777777664 6889999999 899999998887654
Q ss_pred ccCCCHHHHHHHHHHHHHCCCeEEeeC
Q 014169 403 QENVDSSKAESIVKKFQMEGRYLRDVW 429 (429)
Q Consensus 403 ~~~~~~~~a~~~~~~l~~~~Ry~~dvw 429 (429)
+++. ..++|++.|+|
T Consensus 302 --~~~~----------v~~~rih~E~f 316 (316)
T 3jqq_A 302 --QFDE----------KKKKRVHVEVY 316 (316)
T ss_dssp ----CH----------HHHTTEEEEEC
T ss_pred --CCcc----------cccccEEEEeC
Confidence 2221 34578999886
No 16
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2
Probab=99.96 E-value=1.9e-29 Score=239.22 Aligned_cols=186 Identities=18% Similarity=0.243 Sum_probs=154.4
Q ss_pred CCCChHHHHHhhcCC-CCCceeecCCCCCCCCCeeEEEEEEEEccCCCCCcccCcccHHhh-hcCCCCCCCCccEEEEEE
Q 014169 189 ATPPIGVFFAAVAPH-LQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMK-NAIPLEGNGDCSWAPIFI 266 (429)
Q Consensus 189 ~~~~~gq~l~~~~p~-~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~-~l~~G~~~~~~~~v~v~~ 266 (429)
..+.+|||+.+.+|. ...|+|||+|+|.. .+.++|+|+++ ..|.+|+||+ ++++|+ .|.+.+
T Consensus 42 ~~~~pGQ~v~l~~~~~~~~R~ySi~s~~~~-~~~l~i~vk~~---------~~G~~s~~l~~~l~~Gd------~v~v~g 105 (250)
T 1tvc_A 42 VKFEPGQFMDLTIPGTDVSRSYSPANLPNP-EGRLEFLIRVL---------PEGRFSDYLRNDARVGQ------VLSVKG 105 (250)
T ss_dssp CSCCSCCEEEECTTSCSSSEEECCBCCSSS-SCCEEEEECCC---------TTSSSHHHHHHHSSSSS------EEEEEE
T ss_pred cCcCCCcEEEEEeCCCccccccccCCCCCC-CCeEEEEEEEC---------CCCCchHHHHhcCCCCC------EEEEEc
Confidence 346799999998776 57899999999964 47899999854 2499999996 799998 999999
Q ss_pred eCCCccCCCCCCCCEEEEccCcccchhHHHHHHHHHHhhcCCCCCCeEEEEecccCCcccccHHHHHHHHHcCCccEEEE
Q 014169 267 RPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISELIL 346 (429)
Q Consensus 267 p~g~F~lp~~~~~pii~Ia~GtGIAP~~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~~eL~~~~~~~~~~~l~~ 346 (429)
|.|.|.++.+..+++||||+|||||||++|++++... + ...+++|+||+|+.+ |++|.+||+++++....++++.
T Consensus 106 P~G~~~~~~~~~~~~vliagGtGiaP~~~~l~~l~~~---~-~~~~v~l~~~~r~~~-~~~~~~el~~l~~~~~~~~~~~ 180 (250)
T 1tvc_A 106 PLGVFGLKERGMAPRYFVAGGTGLAPVVSMVRQMQEW---T-APNETRIYFGVNTEP-ELFYIDELKSLERSMRNLTVKA 180 (250)
T ss_dssp EECCCSCCCCSSSCEEEEEESSTTHHHHHHHHHHHHH---T-CCSCEEEEEECSSST-TCCCHHHHHHHHHHSSSCEEEE
T ss_pred CccccccCccCCceEEEEEeccCHHHHHHHHHHHHhc---C-CCceEEEEEEeCCHH-HhhhHHHHHHHHHhCCCeEEEE
Confidence 9999998866568999999999999999999998763 2 457899999999999 9999999999988777788999
Q ss_pred EEecCCC----CccchhhhHHHhHHHHHHhhcCCcEEEEeCCCchhHHHHHHHHHHHH
Q 014169 347 AFSREGS----QKEYVQHKMMDKAAQLWSLLSKEGYLYVCGDAKGMARDVHRTLHTIV 400 (429)
Q Consensus 347 a~Sr~~~----~k~yvq~~l~~~~~~l~~~l~~~~~vyvCGp~~~M~~~v~~~L~~i~ 400 (429)
++|++++ .+++|++.+.+.. .+. ..+..||+||| +.|++++++.|.+.+
T Consensus 181 ~~s~~~~~~~g~~g~v~~~l~~~~---~~~-~~~~~vyvCGp-~~m~~~v~~~l~~~G 233 (250)
T 1tvc_A 181 CVWHPSGDWEGEQGSPIDALREDL---ESS-DANPDIYLCGP-PGMIDAACELVRSRG 233 (250)
T ss_dssp CCSSCSSCCSSSSSSSSHHHHHHH---HHS-SSSSEEEEESS-HHHHHHHHHHHHHHC
T ss_pred EeccCCCCcCCccceehHHHHhhh---hcc-cCCcEEEEeCC-HHHHHHHHHHHHHcC
Confidence 9998533 4678888776432 111 24679999999 899999999987654
No 17
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1
Probab=99.96 E-value=2.8e-29 Score=235.26 Aligned_cols=183 Identities=15% Similarity=0.172 Sum_probs=148.2
Q ss_pred CCCChHHHHHhhcCCCCCceeecCCCCCCCCCeeEEEEEEEEccCCCCCcccCcccHH-hhhcCCCCCCCCccEEEEEEe
Q 014169 189 ATPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTW-MKNAIPLEGNGDCSWAPIFIR 267 (429)
Q Consensus 189 ~~~~~gq~l~~~~p~~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~~~G~~S~~-L~~l~~G~~~~~~~~v~v~~p 267 (429)
..+.+|||+.+.+|....|+|||+|+|.. ++.++|+|+++. .|.+|++ +.++++|+ .|.+.+|
T Consensus 28 ~~~~pGq~v~l~~~~~~~R~ySi~s~~~~-~~~l~l~i~~~~---------~G~~s~~~~~~l~~Gd------~v~v~gP 91 (232)
T 1qfj_A 28 FSFRAGQYLMVVMDERDKRPFSMASTPDE-KGFIELHIGASE---------INLYAKAVMDRILKDH------QIVVDIP 91 (232)
T ss_dssp CCCCTTCEEEEESSSSCEEEEECCSCTTS-TTCEEEEEC---------------CCHHHHHHHHHHS------EEEEEEE
T ss_pred CCcCCCCEEEEECCCCceeeeecCCCCCC-CCcEEEEEEEcc---------CCchhHHHHHhCCCCC------EEEEeCC
Confidence 35689999999878778999999999975 478999998752 3666775 56699998 9999999
Q ss_pred CCCccCCCCCCCCEEEEccCcccchhHHHHHHHHHHhhcCCCCCCeEEEEecccCCcccccHHHHHHHHHcCCccEEEEE
Q 014169 268 PSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISELILA 347 (429)
Q Consensus 268 ~g~F~lp~~~~~pii~Ia~GtGIAP~~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~~eL~~~~~~~~~~~l~~a 347 (429)
.|.|.++.+..+++||||+|||||||++|++++... + ...+++|+||+|+.+ |++|.+||+++++...+++++.+
T Consensus 92 ~G~~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~---~-~~~~v~l~~~~r~~~-~~~~~~el~~l~~~~~~~~~~~~ 166 (232)
T 1qfj_A 92 HGEAWLRDDEERPMILIAGGTGFSYARSILLTALAR---N-PNRDITIYWGGREEQ-HLYDLCELEALSLKHPGLQVVPV 166 (232)
T ss_dssp ECSCCCCSCSSSCEEEEEETTCHHHHHHHHHHHHHH---C-TTCCEEEEEEESSGG-GCTTHHHHHHHHHHCTTEEEEEE
T ss_pred ccceEeCCCCCCcEEEEEecccHhHHHHHHHHHHhc---C-CCCcEEEEEeeCCHH-HhhhHHHHHHHHHHCCCeEEEEE
Confidence 999998865568999999999999999999998763 2 457899999999999 99999999999987777889999
Q ss_pred EecCCC----CccchhhhHHHhHHHHHHhhc-CCcEEEEeCCCchhHHHHHHHH-HHH
Q 014169 348 FSREGS----QKEYVQHKMMDKAAQLWSLLS-KEGYLYVCGDAKGMARDVHRTL-HTI 399 (429)
Q Consensus 348 ~Sr~~~----~k~yvq~~l~~~~~~l~~~l~-~~~~vyvCGp~~~M~~~v~~~L-~~i 399 (429)
+|++++ .++++++.+.+. +.. .++.||+||| ++|++++++.| .+.
T Consensus 167 ~s~~~~~~~g~~g~v~~~~~~~------~~~~~~~~vyvCGp-~~m~~~v~~~l~~~~ 217 (232)
T 1qfj_A 167 VEQPEAGWRGRTGTVLTAVLQD------HGTLAEHDIYIAGR-FEMAKIARDLFCSER 217 (232)
T ss_dssp ESSCCTTCCSEESCHHHHHHHH------CSCCTTCEEEEESC-HHHHHHHHHHHHHHS
T ss_pred EcCCCCCcCCceeeHHHHHHHh------cCCccccEEEEECC-HHHHHHHHHHHHHHc
Confidence 998654 356787766442 111 4678999999 89999999988 554
No 18
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum}
Probab=99.96 E-value=2.1e-29 Score=237.77 Aligned_cols=187 Identities=18% Similarity=0.226 Sum_probs=150.0
Q ss_pred CCChHHHHHhhcC--C-CCCceeecCCCCCCCCCeeEEEEEEEEccCCCCCcccCcccHHhhhcCCCCCCCCccEEEEEE
Q 014169 190 TPPIGVFFAAVAP--H-LQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFI 266 (429)
Q Consensus 190 ~~~~gq~l~~~~p--~-~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~~l~~G~~~~~~~~v~v~~ 266 (429)
.+.+|||+.+.+| + ...|+|||+|+|.. .+.++|+|+++ ..|.+|+||+++++|+ .|.+.+
T Consensus 41 ~~~pGq~v~l~~~~~g~~~~R~ysi~s~~~~-~~~~~l~vk~~---------~~G~~S~~l~~l~~Gd------~v~v~g 104 (243)
T 2eix_A 41 GLPIGQHMSVKATVDGKEIYRPYTPVSSDDE-KGYFDLIIKVY---------EKGQMSQYIDHLNPGD------FLQVRG 104 (243)
T ss_dssp CCCTTCEEEEEEEETTEEEEEEECCCSCTTC-CSEEEEEEECC---------TTCHHHHHHHTCCTTC------EEEEEE
T ss_pred CcCCceEEEEEEeeCCCEEEeeeeecCCCCC-CCEEEEEEEEc---------CCCCcchHhhcCCCCC------EEEEEC
Confidence 4679999999865 2 35799999999864 57899999854 2499999999999998 999999
Q ss_pred eCCCccCCCCCCCCEEEEccCcccchhHHHHHHHHHHhhcCCCCCCeEEEEecccCCcccccHHHHHHHHHcCCccEEEE
Q 014169 267 RPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISELIL 346 (429)
Q Consensus 267 p~g~F~lp~~~~~pii~Ia~GtGIAP~~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~~eL~~~~~~~~~~~l~~ 346 (429)
|.|.|.++.+..++++|||+|||||||++|++++... .....+++|+||+|+.+ |++|.+||+++++...+++++.
T Consensus 105 P~G~f~~~~~~~~~~vliagG~GiaP~~~~l~~l~~~---~~~~~~v~l~~~~r~~~-~~~~~~el~~l~~~~~~~~~~~ 180 (243)
T 2eix_A 105 PKGQFDYKPNMVKEMGMIAGGTGITPMLQVARAIIKN---PKEKTIINLIFANVNED-DILLRTELDDMAKKYSNFKVYY 180 (243)
T ss_dssp EECSCCCCTTSSSEEEEEEEGGGHHHHHHHHHHHHTC---TTCCCEEEEEEEEEEGG-GCTTHHHHHHHHHHCTTEEEEE
T ss_pred CeEEEEeCCCCCcEEEEEecCccHHHHHHHHHHHHhC---CCCCcEEEEEEEcCCHH-HhhHHHHHHHHHHHCCCeEEEE
Confidence 9999998866568999999999999999999998752 11357899999999998 9999999999988777788999
Q ss_pred EEecCCC----CccchhhhHHHhHHHHHHhhcCCcEEEEeCCCchhHHHHHHHHHHHH
Q 014169 347 AFSREGS----QKEYVQHKMMDKAAQLWSLLSKEGYLYVCGDAKGMARDVHRTLHTIV 400 (429)
Q Consensus 347 a~Sr~~~----~k~yvq~~l~~~~~~l~~~l~~~~~vyvCGp~~~M~~~v~~~L~~i~ 400 (429)
++|++.+ .++++++.+.+. +......+..||+||| ++|++++++.|.+.+
T Consensus 181 ~~s~~~~~~~g~~g~v~~~~l~~---~~~~~~~~~~vy~CGp-~~m~~~v~~~l~~~G 234 (243)
T 2eix_A 181 VLNNPPAGWTGGVGFVSADMIKQ---HFSPPSSDIKVMMCGP-PMMNKAMQGHLETLG 234 (243)
T ss_dssp EEEECCTTCCSEESSCCHHHHHH---HSCCTTSSEEEEEESS-HHHHHHHHHHHHHHT
T ss_pred EeCCCCccccCcCCccCHHHHHH---hcCCCCCCeEEEEECC-HHHHHHHHHHHHHcC
Confidence 9998543 356777533211 1111113568999999 899999999988654
No 19
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis}
Probab=99.96 E-value=6.2e-29 Score=240.64 Aligned_cols=196 Identities=18% Similarity=0.306 Sum_probs=152.7
Q ss_pred CCChHHHHHhhcCC--------------------------------CCCceeecCCCCCCCCCeeEEEEEEEEcc--C--
Q 014169 190 TPPIGVFFAAVAPH--------------------------------LQPRYYSISSSPRFAPDRVHVTCALVYGP--T-- 233 (429)
Q Consensus 190 ~~~~gq~l~~~~p~--------------------------------~~pR~YSIaSsp~~~~~~i~l~v~~v~~~--~-- 233 (429)
.+.+|||+.+.+|. ..+|+|||+|+|.. .+.++|+|++.... +
T Consensus 38 ~~~pGQ~v~l~~p~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~R~ySi~s~~~~-~~~l~l~v~~~~~~~~~~~ 116 (290)
T 2r6h_A 38 NFKSGSYAQIKIPKYNIRYADYDIQDRFRGDWDKMDAWSLTCKNEEETVRAYSMANYPAE-GNIITLNVRIATPPFDRAA 116 (290)
T ss_dssp CCCTTCEEEEEECSEEEEGGGCCCCTTTHHHHHHTTGGGCEEEECSCEEEEEECCSCTTC-CSEEEEEEECCCCCEETTT
T ss_pred ccCCCceEEEEcccccccccccccchhhcccccccccccccccCCCCcceeeeccCCCCC-CCEEEEEEEEecccccccc
Confidence 46799999986552 35799999999975 57899999864210 0
Q ss_pred CC--CCcccCcccHHhhhcCCCCCCCCccEEEEEEeCCCccCCCCCCCCEEEEccCcccchhHHHHHHHHHHhhcCCCCC
Q 014169 234 PT--GRIHKGVCSTWMKNAIPLEGNGDCSWAPIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLG 311 (429)
Q Consensus 234 ~~--g~~~~G~~S~~L~~l~~G~~~~~~~~v~v~~p~g~F~lp~~~~~pii~Ia~GtGIAP~~s~l~~~~~~~~~~~~~~ 311 (429)
+. .+...|.+|+||+++++|+ .|.|.+|.|.|.++. ..+++||||+|||||||++|+++++... ....
T Consensus 117 ~~~~~~~~~G~~S~~l~~l~~Gd------~v~v~gP~G~f~~~~-~~~~~vliagGtGitP~~s~l~~~~~~~---~~~~ 186 (290)
T 2r6h_A 117 NKWKAGIKPGISSSYIFSLKPGD------KVMMSGPYGDFHIQD-TDAEMLYIGGGAGMAPLRAQILHLFRTL---KTGR 186 (290)
T ss_dssp TEECTTCCCCHHHHHHTTCCTTC------EEEEEEEECCCCCCS-SSCEEEEEEEGGGHHHHHHHHHHHHHTS---CCCS
T ss_pred ccccccCCCcchhhHHhcCCCCC------EEEEEecccCCcCCC-CCCeEEEEECccCHHHHHHHHHHHHHhc---CCCC
Confidence 00 1134699999999999998 999999999998874 4689999999999999999999887621 1357
Q ss_pred CeEEEEecccCCcccccHHHHHHHHHcCCccEEEEEEecCCC------CccchhhhHHHhHHHHHHhh-cCCcEEEEeCC
Q 014169 312 PALLFFGCRNRRMDFIYEDELNNFEEEGVISELILAFSREGS------QKEYVQHKMMDKAAQLWSLL-SKEGYLYVCGD 384 (429)
Q Consensus 312 ~~~L~~G~R~~~~d~ly~~eL~~~~~~~~~~~l~~a~Sr~~~------~k~yvq~~l~~~~~~l~~~l-~~~~~vyvCGp 384 (429)
+++|+||+|+.+ |++|.+||+++++.+.++++++++||+.. .++||++.+.+.. +.+.. ..++.||+|||
T Consensus 187 ~v~l~~~~r~~~-d~~~~~el~~l~~~~~~~~~~~~~s~~~~~~~~~g~~g~v~~~~~~~~--l~~~~~~~~~~vyvCGp 263 (290)
T 2r6h_A 187 KVSYWYGARSKN-EIFYEEDFREIEREFPNFKFHIALSDPQPEDNWTGYVGFIHQVIYDNY--LKDHDAPEDIEYYMCGP 263 (290)
T ss_dssp CEEEEEEESSGG-GCCSHHHHHHHHHHCTTEEEEEEESSCCGGGCCCSCBSCHHHHHHHHT--TTTCSCGGGEEEEEECC
T ss_pred cEEEEEEcCCHH-HHHHHHHHHHHHHhCCCeEEEEEEccCCcccCCCCeeEecCHHHHHhH--HhhccCcCCcEEEEECC
Confidence 899999999999 99999999999987777899999998642 3578877663321 11111 13568999999
Q ss_pred CchhHHHHHHHHHHHH
Q 014169 385 AKGMARDVHRTLHTIV 400 (429)
Q Consensus 385 ~~~M~~~v~~~L~~i~ 400 (429)
++|+++|++.|.+.+
T Consensus 264 -~~m~~~v~~~l~~~G 278 (290)
T 2r6h_A 264 -GPMANAVKGMLENLG 278 (290)
T ss_dssp -HHHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHHHHcC
Confidence 899999999998764
No 20
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A*
Probab=99.96 E-value=5.6e-29 Score=235.52 Aligned_cols=190 Identities=18% Similarity=0.207 Sum_probs=152.4
Q ss_pred CCCChHHHHHhhcCC---CCCceeecCCCCCCCCCeeEEEEEEEEccCCCCCcccCcccHHhhhcCCCCCCCCccEEEEE
Q 014169 189 ATPPIGVFFAAVAPH---LQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIF 265 (429)
Q Consensus 189 ~~~~~gq~l~~~~p~---~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~~l~~G~~~~~~~~v~v~ 265 (429)
..+.+|||+.+.+|. ...|+|||+|+|.. +.++|+|+.+ ..|.+|+||+++++|+ .|.+.
T Consensus 29 ~~~~pGq~v~l~~~~~g~~~~R~ySi~s~~~~--~~l~~~v~~~---------~~G~~s~~l~~l~~Gd------~v~v~ 91 (248)
T 1fdr_A 29 LPFTAGQFTKLGLEIDGERVQRAYSYVNSPDN--PDLEFYLVTV---------PDGKLSPRLAALKPGD------EVQVV 91 (248)
T ss_dssp CCCCTTCEEEEEECC---CEEEEEECCSCTTC--SSEEEEEECC---------TTCSSHHHHHTCCTTC------EEEEE
T ss_pred CCcCCCCcEEEEccCCCCeeeeeecccCCCCC--CcEEEEEEEe---------CCCchhhHHHhCCCcC------EEEEe
Confidence 456899999998773 35799999999864 6899998754 2599999999999998 99999
Q ss_pred -EeCCCccCCCCC-CCCEEEEccCcccchhHHHHHHHHHHhhcCCCCCCeEEEEecccCCcccccHHHHHHHHHcC-Ccc
Q 014169 266 -IRPSNFKLPANP-SVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEG-VIS 342 (429)
Q Consensus 266 -~p~g~F~lp~~~-~~pii~Ia~GtGIAP~~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~~eL~~~~~~~-~~~ 342 (429)
+|.|.|.++.+. .+++||||+|||||||++|++++.. .+ ...+++|+||+|+.+ |++|.+||+++++.. .++
T Consensus 92 ~gP~G~f~l~~~~~~~~~vliagG~GitP~~~~l~~l~~---~~-~~~~v~l~~~~r~~~-~~~~~~el~~l~~~~~~~~ 166 (248)
T 1fdr_A 92 SEAAGFFVLDEVPHCETLWMLATGTAIGPYLSILRLGKD---LD-RFKNLVLVHAARYAA-DLSYLPLMQELEKRYEGKL 166 (248)
T ss_dssp SSCBCCCSGGGSCCCSEEEEEEEGGGGHHHHHHHHHCCS---CT-TCSEEEEEEEESSGG-GCTTHHHHHHHHHHTTTSE
T ss_pred cCCcceeEcCCCCCCceEEEEEecccHHHHHHHHHHHHh---hC-CCCcEEEEEEcCCHH-HhhHHHHHHHHHHhCcCcE
Confidence 999999987543 6799999999999999999998653 11 347899999999998 999999999998764 466
Q ss_pred EEEEEEecCCC---CccchhhhHHHhH-HHHHHh-h-cCCcEEEEeCCCchhHHHHHHHH-HHHHH
Q 014169 343 ELILAFSREGS---QKEYVQHKMMDKA-AQLWSL-L-SKEGYLYVCGDAKGMARDVHRTL-HTIVQ 401 (429)
Q Consensus 343 ~l~~a~Sr~~~---~k~yvq~~l~~~~-~~l~~~-l-~~~~~vyvCGp~~~M~~~v~~~L-~~i~~ 401 (429)
+++.++|+++. .++++++.+.+.. +..... . ..++.||+||| ++|++++++.| .+.+.
T Consensus 167 ~~~~~~s~~~~~~~~~g~v~~~l~~~~l~~~~~~~~~~~~~~vy~CGp-~~m~~~v~~~l~~~~G~ 231 (248)
T 1fdr_A 167 RIQTVVSRETAAGSLTGRIPALIESGELESTIGLPMNKETSHVMLCGN-PQMVRDTQQLLKETRQM 231 (248)
T ss_dssp EEEEEESSSCCTTEEESCHHHHHHTSHHHHHHTSCCCTTTEEEEEEEC-HHHHHHHHHHHHHHHCC
T ss_pred EEEEEEecCCCCCCcceeeChHHHhhhHHHhhccCCCccCCEEEEeCC-HHHHHHHHHHHHHHcCC
Confidence 88999998764 3678888776532 222211 2 24678999999 89999999999 76543
No 21
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A*
Probab=99.95 E-value=2.6e-29 Score=241.55 Aligned_cols=196 Identities=16% Similarity=0.190 Sum_probs=151.1
Q ss_pred CCChHHHHHhhcCC---CCCceeecCCCCCCCCCeeEEEEEEEEccCCCCCcccCcccHHhhhcCCCCCCCCccEEEEEE
Q 014169 190 TPPIGVFFAAVAPH---LQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFI 266 (429)
Q Consensus 190 ~~~~gq~l~~~~p~---~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~~l~~G~~~~~~~~v~v~~ 266 (429)
.+.+|||+.+.+|. ..+|+|||+|+|.. ++.++|+|+++.+.+..+....|.+|+||+++++|+ .|.|.+
T Consensus 46 ~~~pGQ~v~l~~~~~g~~~~R~ySi~s~~~~-~~~~~l~vk~~~~~~~~~~~~~G~~S~~L~~l~~Gd------~v~v~g 118 (275)
T 1umk_A 46 GLPVGQHIYLSARIDGNLVVRPYTPISSDDD-KGFVDLVIKVYFKDTHPKFPAGGKMSQYLESMQIGD------TIEFRG 118 (275)
T ss_dssp CCCTTCEEEEEEEETTEEEEEEECCSSCTTC-CSEEEEEEECCCSSSBTTBTTCCHHHHHHHHCCTTC------EEEEEE
T ss_pred CCCCCcEEEEEEeeCCcEEEeccccCCccCC-CCeEEEEEEEeccCcccccCCCChhHHHHhcCCCCC------EEEEEc
Confidence 46799999997542 36899999999864 578999999764443222335699999999999998 999999
Q ss_pred eCCCccC--------CCC--------CCCCEEEEccCcccchhHHHHHHHHHHhhcCCCCCCeEEEEecccCCcccccHH
Q 014169 267 RPSNFKL--------PAN--------PSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYED 330 (429)
Q Consensus 267 p~g~F~l--------p~~--------~~~pii~Ia~GtGIAP~~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~~ 330 (429)
|.|.|.+ +.+ ..+++||||+|||||||++|++++... .....+++|+||+|+.+ |++|.+
T Consensus 119 P~G~~~~~~~~~f~l~~~~~~~~~~~~~~~~vliagGtGIaP~~~~l~~l~~~---~~~~~~v~l~~~~r~~~-d~~~~~ 194 (275)
T 1umk_A 119 PSGLLVYQGKGKFAIRPDKKSNPIIRTVKSVGMIAGGTGITPMLQVIRAIMKD---PDDHTVCHLLFANQTEK-DILLRP 194 (275)
T ss_dssp EECSEEEEETTEEEECSSTTSCCEEEECSEEEEEEEGGGHHHHHHHHHHHHTC---TTCCCEEEEEEEESSGG-GCTTHH
T ss_pred CccceEecCCccccccccccccccccCCceEEEEecCccHhHHHHHHHHHHhC---CCCCcEEEEEEEcCCHH-HhhHHH
Confidence 9998754 321 357999999999999999999998752 11357899999999998 999999
Q ss_pred HHHHHHHcCC-ccEEEEEEecCCCC----ccchhhhHHHhHHHHHHhhcCCcEEEEeCCCchhHH-HHHHHHHHHH
Q 014169 331 ELNNFEEEGV-ISELILAFSREGSQ----KEYVQHKMMDKAAQLWSLLSKEGYLYVCGDAKGMAR-DVHRTLHTIV 400 (429)
Q Consensus 331 eL~~~~~~~~-~~~l~~a~Sr~~~~----k~yvq~~l~~~~~~l~~~l~~~~~vyvCGp~~~M~~-~v~~~L~~i~ 400 (429)
||+++++... .++++.++|+++.. +++|++.+.+. .......++.||+||| ++|++ ++++.|.+.+
T Consensus 195 el~~l~~~~~~~~~~~~~~s~~~~~~~~~~g~v~~~~l~~---~l~~~~~~~~vyvCGp-~~m~~~~v~~~L~~~G 266 (275)
T 1umk_A 195 ELEELRNKHSARFKLWYTLDRAPEAWDYGQGFVNEEMIRD---HLPPPEEEPLVLMCGP-PPMIQYACLPNLDHVG 266 (275)
T ss_dssp HHHHHHHHCTTTEEEEEEESSCCSSCSSEESSCCHHHHHH---HSCCGGGCCEEEEESC-HHHHHHTTHHHHHHHT
T ss_pred HHHHHHHhCcCcEEEEEEEcCCCccccCccCccCHHHHHH---hcCCCCCCeEEEEECC-HHHHHHHHHHHHHHcC
Confidence 9999988754 56789999986542 56777643221 1111124679999999 89999 8999988754
No 22
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.95 E-value=2.1e-28 Score=242.35 Aligned_cols=183 Identities=25% Similarity=0.293 Sum_probs=153.5
Q ss_pred CCCChHHHHHhhcCC-CCCceeecCCCCCCCCCeeEEEEEEEEccCCCCCcccCcccHHhh-hcCCCCCCCCccEEEEEE
Q 014169 189 ATPPIGVFFAAVAPH-LQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMK-NAIPLEGNGDCSWAPIFI 266 (429)
Q Consensus 189 ~~~~~gq~l~~~~p~-~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~-~l~~G~~~~~~~~v~v~~ 266 (429)
..+.+|||+.+.+|. ..+|+|||+|+|. .+.++|+|+++ ..|.+|+||+ ++++|+ .|.+.+
T Consensus 137 ~~~~pGQ~v~l~~~~~~~~R~ySi~s~~~--~~~l~~~vk~~---------~~G~~S~~L~~~l~~Gd------~v~v~g 199 (338)
T 1krh_A 137 IHFLAGQYVNVTLPGTTETRSYSFSSQPG--NRLTGFVVRNV---------PQGKMSEYLSVQAKAGD------KMSFTG 199 (338)
T ss_dssp CCCCTTCEEEEECTTSSCEEEEECCSCTT--CSEEEEEEECC---------TTCHHHHHHHTTCCTTC------EEEEEE
T ss_pred CCcCCCCeEEEEcCCCCccccccccCCCC--CCeEEEEEEEc---------CCCCchhhHhhccCCCC------EEEEEC
Confidence 456899999998776 5689999999986 57899999854 2499999996 699998 999999
Q ss_pred eCCCccCCCCCCCCEEEEccCcccchhHHHHHHHHHHhhcCCCCCCeEEEEecccCCcccccHHHHHHHHHcCCccEEEE
Q 014169 267 RPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISELIL 346 (429)
Q Consensus 267 p~g~F~lp~~~~~pii~Ia~GtGIAP~~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~~eL~~~~~~~~~~~l~~ 346 (429)
|.|.|.++.+ .+++||||+|||||||++|++++... + ...+++|+||+|+.+ |++|.++|+++++...++++++
T Consensus 200 P~G~f~~~~~-~~~~vliagGtGiaP~~s~l~~l~~~---~-~~~~v~l~~~~r~~~-d~~~~~el~~l~~~~~~~~~~~ 273 (338)
T 1krh_A 200 PFGSFYLRDV-KRPVLMLAGGTGIAPFLSMLQVLEQK---G-SEHPVRLVFGVTQDC-DLVALEQLDALQQKLPWFEYRT 273 (338)
T ss_dssp EECSCSCCCC-SSCEEEEEEGGGHHHHHHHHHHHHHH---C-CSSCEEEEEEESSGG-GCCCHHHHHHHHHHCTTEEEEE
T ss_pred CccceEeCCC-CceEEEEEccccHhHHHHHHHHHHHc---C-CCCeEEEEEEeCCHH-HhhhHHHHHHHHHhCCCeEEEE
Confidence 9999998765 48999999999999999999998763 2 457899999999998 9999999999998777788999
Q ss_pred EEecCCC---CccchhhhHHHhHHHHHHhhcCCcEEEEeCCCchhHHHHHHHHHHHH
Q 014169 347 AFSREGS---QKEYVQHKMMDKAAQLWSLLSKEGYLYVCGDAKGMARDVHRTLHTIV 400 (429)
Q Consensus 347 a~Sr~~~---~k~yvq~~l~~~~~~l~~~l~~~~~vyvCGp~~~M~~~v~~~L~~i~ 400 (429)
++|+++. .+++|++.+.+.. + -..+..||+||| ++|++++++.|.+.+
T Consensus 274 ~~s~~~~~~~~~g~v~~~l~~~~--~---~~~~~~vy~CGp-~~m~~~v~~~l~~~G 324 (338)
T 1krh_A 274 VVAHAESQHERKGYVTGHIEYDW--L---NGGEVDVYLCGP-VPMVEAVRSWLDTQG 324 (338)
T ss_dssp EETTCCSSSSEESCSGGGCCGGG--G---GGGCSEEEEEEE-HHHHHHHHHHHHHHT
T ss_pred EEecCCCCCCccCccCHHHHHhh--c---ccCCcEEEEECC-HHHHHHHHHHHHHcC
Confidence 9998754 3578888775321 1 124678999999 899999999997654
No 23
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor}
Probab=99.95 E-value=3.1e-28 Score=229.63 Aligned_cols=185 Identities=15% Similarity=0.282 Sum_probs=148.3
Q ss_pred CCCChHHHHHhhcCCC-----CCceeecCCCCCCCCCeeEEEEEEEEccCCCCCcccCcccHHhh-hcCCCCCCCCccEE
Q 014169 189 ATPPIGVFFAAVAPHL-----QPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMK-NAIPLEGNGDCSWA 262 (429)
Q Consensus 189 ~~~~~gq~l~~~~p~~-----~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~-~l~~G~~~~~~~~v 262 (429)
..+.+|||+.+.+|.. .+|+|||+|+|.. +.++|+|+.+. .++...|.+|+||+ ++++|+ .|
T Consensus 32 ~~~~pGq~v~l~~~~~~~~~~~~R~ySi~s~~~~--~~~~i~vk~~~----~~~~~~G~~S~~l~~~l~~G~------~v 99 (243)
T 4eh1_A 32 LDYQPGQYIGIEVTPEGSDYREIRQYSLSHASNG--REYRISVKREG----VGSDNPGLVSHYLHNNVKVGD------SV 99 (243)
T ss_dssp CCCCTTCEEEEEECCSSCSSCEEEEEEBCSCCCS--SCEEEEEECTT----TTSSSCCHHHHHHHHHCCTTC------EE
T ss_pred CCcCCCCEEEEEEecCCCccccceeeEeccCCCC--CeEEEEEEEee----cCCCCCCeehhHHHhcCCCCC------EE
Confidence 3567999999987632 3599999999863 67888887531 12235699999997 599998 99
Q ss_pred EEEEeCCCccCCCCCCCCEEEEccCcccchhHHHHHHHHHHhhcCCCCCCeEEEEecccCCcccccHHHHHHHHHcCCcc
Q 014169 263 PIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVIS 342 (429)
Q Consensus 263 ~v~~p~g~F~lp~~~~~pii~Ia~GtGIAP~~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~~eL~~~~~~~~~~ 342 (429)
.+.+|.|.|.++ +..+++||||+|||||||++|++++... + ... ++|+||+|+.+ |++|.+||+++++.+ .+
T Consensus 100 ~v~gP~G~~~~~-~~~~~~vliagGtGitp~~~~l~~l~~~---~-~~~-v~l~~~~r~~~-~~~~~~el~~l~~~~-~~ 171 (243)
T 4eh1_A 100 KLYAPAGDFFYV-ERERPVVLISAGVGATPMQAILHTLAKQ---N-KSG-VTYLYACNSAK-EHTFAQETAQLIAQQ-GW 171 (243)
T ss_dssp EEEEEECSCCCC-CCSSCEEEEEEGGGHHHHHHHHHHHHHT---T-CCS-EEEEEEESSGG-GCTTHHHHHHHHHHH-TC
T ss_pred EEEccCcccCcC-CCCCCEEEEEccccHHHHHHHHHHHHHc---C-CCe-EEEEEEeCChh-hhhHHHHHHHHHHhC-Ce
Confidence 999999999988 5578999999999999999999998762 2 223 99999999999 999999999999877 67
Q ss_pred EEEEEEecCCCC---ccchhhhHHHhHHHHHHhhcCCcEEEEeCCCchhHHHHHHHHHHHHH
Q 014169 343 ELILAFSREGSQ---KEYVQHKMMDKAAQLWSLLSKEGYLYVCGDAKGMARDVHRTLHTIVQ 401 (429)
Q Consensus 343 ~l~~a~Sr~~~~---k~yvq~~l~~~~~~l~~~l~~~~~vyvCGp~~~M~~~v~~~L~~i~~ 401 (429)
+++.++|++... +++++..+. .+-..+..||+||| +.|++++++.|.+.+.
T Consensus 172 ~~~~~~s~~~~~~~~~g~~~~~~~-------~~~~~~~~vyvCGp-~~m~~~v~~~l~~~g~ 225 (243)
T 4eh1_A 172 MQQVWYRDESADDVLQGEMQLAEL-------ILPIEDGDFYLCGP-IGFMQYVVKQLLALGV 225 (243)
T ss_dssp EEEEEESSCCCTTCEESSCCCTTS-------CCCTTTCEEEEEEC-HHHHHHHHHHHHHHTC
T ss_pred EEEEEEccCCCcccccCCccHHHe-------eccCCCcEEEEECC-HHHHHHHHHHHHHcCC
Confidence 899999986552 456654432 11125689999999 8999999999987653
No 24
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5
Probab=99.95 E-value=6.3e-28 Score=243.92 Aligned_cols=182 Identities=15% Similarity=0.244 Sum_probs=148.3
Q ss_pred CCChHHHHHhhcCC-----CCCceeecCCCCCCCCCeeEEEEEEEEccCCCCCcccCcccHHhhh-cCCCCCCCCccEEE
Q 014169 190 TPPIGVFFAAVAPH-----LQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKN-AIPLEGNGDCSWAP 263 (429)
Q Consensus 190 ~~~~gq~l~~~~p~-----~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~~-l~~G~~~~~~~~v~ 263 (429)
.+.+|||+.+.+|. ..+|+|||+|+|. .+.++|+|+.+ ..|.+|+||++ +++|| .|.
T Consensus 182 ~~~pGQ~v~l~~~~~~~~~~~~R~YSi~s~p~--~~~~~i~Vk~~---------~~G~~S~~L~~~l~~Gd------~v~ 244 (396)
T 1gvh_A 182 EYRPGQYLGVWLKPEGFPHQEIRQYSLTRKPD--GKGYRIAVKRE---------EGGQVSNWLHNHANVGD------VVK 244 (396)
T ss_dssp CCCTTCEEEEEECCTTCSSCEEEEEECCSCCC--SSCEEEEEECC---------TTCHHHHHHHHTCCTTC------EEE
T ss_pred CCCCCCeEEEEecCCCCccceeecceeccCCC--CCeEEEEEEEc---------CCCcchHHHHhcCCCCC------EEE
Confidence 56899999998663 2479999999986 46899999843 24999999998 99999 999
Q ss_pred EEEeCCCccCCCCCCCCEEEEccCcccchhHHHHHHHHHHhhcCCCCCCeEEEEecccCCcccccHHHHHHHHHcCCccE
Q 014169 264 IFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISE 343 (429)
Q Consensus 264 v~~p~g~F~lp~~~~~pii~Ia~GtGIAP~~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~~eL~~~~~~~~~~~ 343 (429)
+.+|.|.|.++.+..+|+||||+|||||||++|++++... + ...+++|+||+|+.+ |++|.+||+++++.+.+++
T Consensus 245 v~gP~G~f~l~~~~~~~~vlIagGtGitP~~s~l~~l~~~---~-~~~~v~l~~~~r~~~-~~~~~~el~~l~~~~~~~~ 319 (396)
T 1gvh_A 245 LVAPAGDFFMAVADDTPVTLISAGVGQTPMLAMLDTLAKA---G-HTAQVNWFHAAENGD-VHAFADEVKELGQSLPRFT 319 (396)
T ss_dssp EEEEECSCCCCCCTTCCEEEEEEGGGGHHHHHHHHHHHHH---T-CCSCEEEEEEESCTT-TCCSHHHHHHHHHTSSSEE
T ss_pred EEcCCcceECCCCCCCCEEEEecchhHhHHHHHHHHHHhc---C-CCCcEEEEEEeCCHH-HhhhHHHHHHHHHHCCCeE
Confidence 9999999999755678999999999999999999998763 2 457899999999999 9999999999998877788
Q ss_pred EEEEEecCCCC---------ccchhhhHHHhHHHHHHh-hcCCcEEEEeCCCchhHHHHHHHHHHHH
Q 014169 344 LILAFSREGSQ---------KEYVQHKMMDKAAQLWSL-LSKEGYLYVCGDAKGMARDVHRTLHTIV 400 (429)
Q Consensus 344 l~~a~Sr~~~~---------k~yvq~~l~~~~~~l~~~-l~~~~~vyvCGp~~~M~~~v~~~L~~i~ 400 (429)
+++++|+++.. .+++.... +.+. ..+++.||+||| ++|+++|++.|.+.+
T Consensus 320 ~~~~~s~~~~~~~~~~~~~~~G~~~~~~------l~~~~~~~~~~vyvCGp-~~m~~~v~~~L~~~G 379 (396)
T 1gvh_A 320 AHTWYRQPSEADRAKGQFDSEGLMDLSK------LEGAFSDPTMQFYLCGP-VGFMQFTAKQLVDLG 379 (396)
T ss_dssp EEEEESSCCHHHHHHTCCSEESSCCGGG------SSSCCCCTTCEEEEESC-HHHHHHHHHHHHHTT
T ss_pred EEEEECCCCccccccCccCccCcCCHHH------HhhccCCCCCEEEEeCC-HHHHHHHHHHHHHcC
Confidence 99999987531 23443321 1111 113689999999 899999999987654
No 25
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A*
Probab=99.95 E-value=7.6e-29 Score=237.88 Aligned_cols=205 Identities=17% Similarity=0.192 Sum_probs=157.3
Q ss_pred CCCChHHHHHhhcCC---CCCceeecCCCCCCCCCeeEEEEEEEEccCCCCCcccCcccHHhhhcCCCCCCCCccEEEEE
Q 014169 189 ATPPIGVFFAAVAPH---LQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIF 265 (429)
Q Consensus 189 ~~~~~gq~l~~~~p~---~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~~l~~G~~~~~~~~v~v~ 265 (429)
..+.+|||+.+.+|. ...|+|||+|+|.. +.++|+|+.+ ..|.+|+||+++++|+ .|.+.
T Consensus 45 ~~~~pGQ~v~l~~~~~~~~~~r~ySi~s~~~~--~~~~~~v~~~---------~~G~~s~~l~~l~~Gd------~v~v~ 107 (271)
T 4fk8_A 45 LRFNNGEFTMVGLEVDGKPLTRAYSIVSPNYE--EHLEFFSIKV---------QNGPLTSRLQHLKVGD------PVLIG 107 (271)
T ss_dssp CCCCTTCEEEEEEEETTEEEEEEEECCSCTTS--SSEEEEEECC---------TTCTTHHHHTTCCTTC------EEEEE
T ss_pred CCcCCCCEEEEEccCCCceeeeeEeccCCCCC--CcEEEEEEEE---------CCCchhhHHhcCCCCC------EEEEe
Confidence 356799999998662 34799999999863 6788888754 3599999999999998 99999
Q ss_pred -EeCCCccCCC-CCCCCEEEEccCcccchhHHHHHHHHHHhhcCCCCCCeEEEEecccCCcccccHHHHHHHHHcCC---
Q 014169 266 -IRPSNFKLPA-NPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGV--- 340 (429)
Q Consensus 266 -~p~g~F~lp~-~~~~pii~Ia~GtGIAP~~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~~eL~~~~~~~~--- 340 (429)
+|.|.|.++. ...++++|||+|||||||+++++++.... ...+++|+||+|+.+ |++|.+||+++++...
T Consensus 108 ~gP~G~~~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~~----~~~~v~l~~~~r~~~-~~~~~~el~~l~~~~~~~~ 182 (271)
T 4fk8_A 108 KKPTGTLVADNLLPGKTLWMLSTGTGLAPFMSIIRDPDIYE----RFDKVVLTHTCRLKG-ELAYMDYIKHDLPGHEYLG 182 (271)
T ss_dssp SCCBCSCCGGGBCCCSEEEEEECGGGGHHHHHHTTCHHHHH----HCSEEEEEECCCSHH-HHHHHHHHHTCCTTCTTHH
T ss_pred cCCCcceecCCcCCCCeEEEEECCEEHHHHHHHHHHHHhcC----CCCCEEEEEecCCHH-HHhHHHHHHHHHHhCcccc
Confidence 9999998875 35689999999999999999999876532 346899999999998 9999999999877654
Q ss_pred -----ccEEEEEEecCCC-CccchhhhHHHhHHHHHHh----h-cCCcEEEEeCCCchhHHHHHHHHHHHHHHccCCCHH
Q 014169 341 -----ISELILAFSREGS-QKEYVQHKMMDKAAQLWSL----L-SKEGYLYVCGDAKGMARDVHRTLHTIVQEQENVDSS 409 (429)
Q Consensus 341 -----~~~l~~a~Sr~~~-~k~yvq~~l~~~~~~l~~~----l-~~~~~vyvCGp~~~M~~~v~~~L~~i~~~~~~~~~~ 409 (429)
.++++.++|+++. .++++++.+.+.. .+..+ + ..++.||+||| +.|++++++.|.+.+.....+
T Consensus 183 ~~~~~~~~~~~~~s~~~~~~~G~v~~~~~~~~-l~~~~~~~~~~~~~~~v~vCGp-~~m~~~v~~~l~~~gv~~~~i--- 257 (271)
T 4fk8_A 183 DVIREKLVYYPTVTREEFENEGRITDLIASGK-LFTDLDMPPFSPEQDRVMLCGS-TAMLKDTTELLKKAGLVEGKN--- 257 (271)
T ss_dssp HHHHHHEEEEECC-------CCHHHHHHHHSH-HHHHTTCCCCCTTTEEEEEEEC-HHHHHHHHHHHHHTTCCBCBT---
T ss_pred ccccceEEEEEEecCCccccccccChHHhcch-hhhhcccccCCCCCCEEEEECC-HHHHHHHHHHHHHcCCchhhc---
Confidence 4678888888764 4678887765421 11111 1 24679999999 899999999998776544433
Q ss_pred HHHHHHHHHHHCCCeEEeeC
Q 014169 410 KAESIVKKFQMEGRYLRDVW 429 (429)
Q Consensus 410 ~a~~~~~~l~~~~Ry~~dvw 429 (429)
...|+|+.|.|
T Consensus 258 ---------~~~~~~~~E~y 268 (271)
T 4fk8_A 258 ---------SAPGHYVIERA 268 (271)
T ss_dssp ---------TBCBSEEEEES
T ss_pred ---------CCCCcEEEEEe
Confidence 34678888765
No 26
>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A*
Probab=99.95 E-value=5.4e-28 Score=232.27 Aligned_cols=188 Identities=18% Similarity=0.222 Sum_probs=150.0
Q ss_pred CCChHHHHHhhcCC----CCCceeecCCCCCCCCCeeEEEEEEEEccCCCCCcccCcccHHhhhcCCCCCCCCccEEEEE
Q 014169 190 TPPIGVFFAAVAPH----LQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIF 265 (429)
Q Consensus 190 ~~~~gq~l~~~~p~----~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~~l~~G~~~~~~~~v~v~ 265 (429)
.+.+|||+.+.+|. ..+|+|||+|+|.. +.++|+|+.+ ..|.+|+||+++++|+ .|.+.
T Consensus 43 ~~~pGQ~v~l~~~~~~g~~~~R~ySi~s~~~~--~~~~l~v~~~---------~~G~~s~~l~~l~~Gd------~v~v~ 105 (272)
T 2bgi_A 43 RFRSGEFVMIGLLDDNGKPIMRAYSIASPAWD--EELEFYSIKV---------PDGPLTSRLQHIKVGE------QIILR 105 (272)
T ss_dssp CCCTTCEEEEEEECTTSCEEEEEEECCSCTTC--SEEEEEEECC---------TTCTTHHHHTTCCTTC------EEEEE
T ss_pred ccCCCCEEEEEeccCCCCeeeeeeeeccCCCC--CeEEEEEEEc---------cCCCchhHHHhCCCCC------EEEEe
Confidence 46799999998763 25799999999863 7899988754 2599999999999998 99999
Q ss_pred -EeCCCccCCCCC-CCCEEEEccCcccchhHHHHHHHHHHhhcCCCCCCeEEEEecccCCcccccHHHHH-HHHH-----
Q 014169 266 -IRPSNFKLPANP-SVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELN-NFEE----- 337 (429)
Q Consensus 266 -~p~g~F~lp~~~-~~pii~Ia~GtGIAP~~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~~eL~-~~~~----- 337 (429)
+|.|.|.++... .+++||||+|||||||++|++++... + ...+++|+||+|+.+ |++|.+||+ ++++
T Consensus 106 ~gP~G~f~~~~~~~~~~~vliagG~GiaP~~~~l~~l~~~---~-~~~~v~l~~~~r~~~-~~~~~~el~~~l~~~~~~~ 180 (272)
T 2bgi_A 106 PKPVGTLVIDALLPGKRLWFLATGTGIAPFASLMREPEAY---E-KFDEVIMMHACRTVA-ELEYGRQLVEALQEDPLIG 180 (272)
T ss_dssp EEEECSCCGGGBCCCSEEEEEEEGGGGHHHHHHTTCGGGG---T-SCSEEEEEEEESSSG-GGHHHHHHHHHHHHCTTTT
T ss_pred eCCCCcccccccccCCeEEEEeecccHHHHHHHHHHHHhc---C-CCCcEEEEEEeCCHH-HhhHHHHHHHHHHhcchhh
Confidence 899999887543 57999999999999999999886542 1 357899999999999 999999999 9987
Q ss_pred c--CCccEEEEEEecCCC-CccchhhhHHHhH-HHHHHh--h-cCCcEEEEeCCCchhHHHHHHHHHHHH
Q 014169 338 E--GVISELILAFSREGS-QKEYVQHKMMDKA-AQLWSL--L-SKEGYLYVCGDAKGMARDVHRTLHTIV 400 (429)
Q Consensus 338 ~--~~~~~l~~a~Sr~~~-~k~yvq~~l~~~~-~~l~~~--l-~~~~~vyvCGp~~~M~~~v~~~L~~i~ 400 (429)
. ...++++.++|++.. .++++++.+.+.. .....+ + ..++.||+||| ++|++++++.|.+.+
T Consensus 181 ~~~~~~~~~~~~~s~~~~~~~g~v~~~l~~~~l~~~~~~~~~~~~~~~vyvCGp-~~m~~~v~~~l~~~G 249 (272)
T 2bgi_A 181 ELVEGKLKYYPTTTREEFHHMGRITDNLASGKVFEDLGIAPMNPETDRAMVCGS-LAFNVDVMKVLESYG 249 (272)
T ss_dssp TTSTTTEEEEEEESSSCCSSBCCHHHHHHSCHHHHHHTCCCCCTTTEEEEEEEC-HHHHHHHHHHHHTTT
T ss_pred cccCCcEEEEEEecCCccccCceechHHHhhhHhhhcccccCCCCCcEEEEECC-HHHHHHHHHHHHHcC
Confidence 3 356688999998743 4688988775432 111111 1 14679999999 899999999987654
No 27
>4g1v_A Flavohemoglobin; three domains: globin fold, antiparallel beta-barrel, alpha/ fold, RESP., FAD, oxidoreductase; HET: HEM FAD; 2.10A {Saccharomyces cerevisiae} PDB: 4g1b_A*
Probab=99.94 E-value=1.9e-27 Score=240.80 Aligned_cols=185 Identities=13% Similarity=0.254 Sum_probs=150.0
Q ss_pred CCChHHHHHhhc--C--C---CCCceeecCCCCCCCCCeeEEEEEEEEccCCCCCcccCcccHHhh-hcCCCCCCCCccE
Q 014169 190 TPPIGVFFAAVA--P--H---LQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMK-NAIPLEGNGDCSW 261 (429)
Q Consensus 190 ~~~~gq~l~~~~--p--~---~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~-~l~~G~~~~~~~~ 261 (429)
.+.+|||+.+.+ | + ..+|+|||+|+|. ++.++|+|+.... .+....|.+|+||+ ++++|+ .
T Consensus 183 ~~~pGQ~v~l~~~~~~~~~~~~~~R~ySi~s~p~--~~~~~i~Vk~~~~---~~~~~~G~~S~~L~~~l~~Gd------~ 251 (399)
T 4g1v_A 183 PITPGQYITVNTHPIRQENQYDALRHYSLCSAST--KNGLRFAVKMEAA---RENFPAGLVSEYLHKDAKVGD------E 251 (399)
T ss_dssp CCCTTCEEEEEECCCSTTCCSCEEEEEEBSCSCC--TTCEEEEEECCCC---BTTBCCCHHHHHHHHTCCTTC------E
T ss_pred CCCCCCEEEEEEeCCCCCCccceeeeecccCCCC--CCeEEEEEEeccC---CCCCCCCEehhHHHhCCCCCC------E
Confidence 567999999974 4 3 2469999999996 3679999885311 11124699999997 699999 9
Q ss_pred EEEEEeCCCccCCCC----CCCCEEEEccCcccchhHHHHHHHHHHhhcCCCCCCeEEEEecccCCcccccHHHHHHHHH
Q 014169 262 APIFIRPSNFKLPAN----PSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEE 337 (429)
Q Consensus 262 v~v~~p~g~F~lp~~----~~~pii~Ia~GtGIAP~~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~~eL~~~~~ 337 (429)
|.+.+|.|.|.++.+ ..+|+||||+|||||||++|++++... + ..++++|+||+|+.+ |++|.++|+++++
T Consensus 252 v~v~gP~G~f~l~~~~~~~~~~~~vlIagG~GitP~~s~l~~l~~~---~-~~~~v~l~~~~r~~~-~~~~~~el~~l~~ 326 (399)
T 4g1v_A 252 IKLSAPAGDFAINKELIHQNEVPLVLLSSGVGVTPLLAMLEEQVKC---N-PNRPIYWIQSSYDEK-TQAFKKHVDELLA 326 (399)
T ss_dssp EEEEEEECSCCCCTTTTTCSSSCEEEEEEGGGHHHHHHHHHHHHHH---C-TTSCEEEEEEESSST-TSTTHHHHHHHHT
T ss_pred EEEEecccceeeCcccccCCCCCEEEEecceeHhHHHHHHHHHHHc---C-CCCCEEEEEecCCHH-HhhhHHHHHHHHH
Confidence 999999999999865 578999999999999999999998763 2 457899999999998 9999999999998
Q ss_pred cCCccEEEEEEecCCCCccchhhhHHHhHHHHHHhhcCCcEEEEeCCCchhHHHHHHHHHHHH
Q 014169 338 EGVISELILAFSREGSQKEYVQHKMMDKAAQLWSLLSKEGYLYVCGDAKGMARDVHRTLHTIV 400 (429)
Q Consensus 338 ~~~~~~l~~a~Sr~~~~k~yvq~~l~~~~~~l~~~l~~~~~vyvCGp~~~M~~~v~~~L~~i~ 400 (429)
...++++++++|++. ++++.. .+.+.+.+++.||+||| ++|++++++.|.+.+
T Consensus 327 ~~~~~~~~~~~s~~~---g~~~~~------~l~~~~~~~~~vyvCGp-~~m~~~v~~~L~~~G 379 (399)
T 4g1v_A 327 ECANVDKIIVHTDTE---PLINAA------FLKEKSPAHADVYTCGS-LAFMQAMIGHLKELE 379 (399)
T ss_dssp TCSSEEEEEEETTTS---CCCCHH------HHHHHSCSSCEEEEEEC-HHHHHHHHHHHHHTT
T ss_pred hCCCcEEEEEEeCCC---CcccHH------HHHhhCCCCCEEEEECC-HHHHHHHHHHHHHcC
Confidence 888888999999864 455422 12233445789999999 899999999997764
No 28
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A*
Probab=99.94 E-value=9.1e-28 Score=230.06 Aligned_cols=195 Identities=14% Similarity=0.204 Sum_probs=145.2
Q ss_pred CCChHHHHHhhcC--C-CCCceeecCCCCCCCCCeeEEEEEEEEccCCCCC-cccCcccHHhhhcCCCCCCCCccEEEEE
Q 014169 190 TPPIGVFFAAVAP--H-LQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGR-IHKGVCSTWMKNAIPLEGNGDCSWAPIF 265 (429)
Q Consensus 190 ~~~~gq~l~~~~p--~-~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~-~~~G~~S~~L~~l~~G~~~~~~~~v~v~ 265 (429)
.+.+|||+.+.++ + ..+|+|||+|+|.. ++.++|+|+++.. +..++ ...|.+|+||+++++|+ .|.+.
T Consensus 42 ~~~pGQ~v~l~~~~~g~~~~R~ySi~s~~~~-~~~~~l~vk~~~~-~~~~~~~~~G~~s~~l~~l~~Gd------~v~v~ 113 (270)
T 2cnd_A 42 GLPIGKHIFVCATIEGKLCMRAYTPTSMVDE-IGHFDLLVKVYFK-NEHPKFPNGGLMTQYLDSLPVGS------YIDVK 113 (270)
T ss_dssp CCCTTCEEEEEEEETTEEEEEEECCCSCTTC-CSEEEEEEECCCS-SCBTTBTTCCHHHHHHHHCCTTC------EEEEE
T ss_pred CCCCCCEEEEEeeeCCcEEEEeeccCCCccC-CCEEEEEEEEecc-CcccccCCCCchhhHHhcCCCCC------EEEEE
Confidence 4689999988744 2 35799999999864 5789999986521 11111 13599999999999998 99999
Q ss_pred EeCCC--------ccCCC--CCCCCEEEEccCcccchhHHHHHHHHHHhhcCCCCCCeEEEEecccCCcccccHHHHHHH
Q 014169 266 IRPSN--------FKLPA--NPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNF 335 (429)
Q Consensus 266 ~p~g~--------F~lp~--~~~~pii~Ia~GtGIAP~~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~~eL~~~ 335 (429)
+|.|. |.++. +..+++||||+|||||||++|++++.... .....+++|+||+|+.+ |++|.+||+++
T Consensus 114 gP~G~~~~~~~g~f~l~~~~~~~~~~vliagGtGiaP~~~~l~~l~~~~--~~~~~~v~l~~~~r~~~-d~~~~~el~~l 190 (270)
T 2cnd_A 114 GPLGHVEYTGRGSFVINGKQRNARRLAMICGGSGITPMYQIIQAVLRDQ--PEDHTEMHLVYANRTED-DILLRDELDRW 190 (270)
T ss_dssp EEECSEECCSSSCEEETTEEECCSEEEEEEEGGGHHHHHHHHHHHHHTT--TTCCCEEEEEEEESCGG-GCTTHHHHHHH
T ss_pred CCcccceeccccceeccCCcccCCEEEEEeccccHHHHHHHHHHHHhcC--CCCCcEEEEEEEcCCHH-HcchHHHHHHH
Confidence 99996 55653 24679999999999999999999987621 11357899999999999 99999999999
Q ss_pred HHcCC-ccEEEEEEecC---CC----CccchhhhHHHhHHHHHHhhcCCcEEEEeCCCchhHHH-HHHHHHHH
Q 014169 336 EEEGV-ISELILAFSRE---GS----QKEYVQHKMMDKAAQLWSLLSKEGYLYVCGDAKGMARD-VHRTLHTI 399 (429)
Q Consensus 336 ~~~~~-~~~l~~a~Sr~---~~----~k~yvq~~l~~~~~~l~~~l~~~~~vyvCGp~~~M~~~-v~~~L~~i 399 (429)
++... .++++.++|++ +. .++++++.+.+. +......++.||+||| ++|+++ +++.|.+.
T Consensus 191 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~g~v~~~~l~~---~l~~~~~~~~vyvCGp-~~m~~~~~~~~L~~~ 259 (270)
T 2cnd_A 191 AAEYPDRLKVWYVIDQVKRPEEGWKYSVGFVTEAVLRE---HVPEGGDDTLALACGP-PPMIQFAISPNLEKM 259 (270)
T ss_dssp HHHCTTTEEEEEEESCCSCGGGCCCSEESSCCHHHHHH---HSCCCSSSEEEEEECC-HHHHHTTTHHHHHTT
T ss_pred HHHCcCcEEEEEEECCCCCCCCCcccccccCCHHHHHH---hcCCCcCCEEEEEECC-HHHHHHHHHHHHHHc
Confidence 87754 56788888873 21 257777654221 1111113468999999 899996 57777653
No 29
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=99.94 E-value=1.6e-27 Score=227.68 Aligned_cols=173 Identities=20% Similarity=0.234 Sum_probs=140.1
Q ss_pred CCChHHHHHhhcCC---CCCceeecCCCCCCCCCeeEEEEEEEEccCCCCCcccCcccHHhhhcCCCCCCCCccEEEEEE
Q 014169 190 TPPIGVFFAAVAPH---LQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFI 266 (429)
Q Consensus 190 ~~~~gq~l~~~~p~---~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~~l~~G~~~~~~~~v~v~~ 266 (429)
.+.+|||+.+.+|. ..+|+|||+|+|.. .+.++|+|+.+ ..|.+|+||+++++|+ .|.+.+
T Consensus 33 ~~~pGQ~v~l~~~~~~~~~~R~ySi~s~~~~-~~~l~~~vk~~---------~~G~~S~~l~~l~~Gd------~v~v~g 96 (262)
T 1ep3_B 33 MDLPGQFLHLAVPNGAMLLRRPISISSWDKR-AKTCTILYRIG---------DETTGTYKLSKLESGA------KVDVMG 96 (262)
T ss_dssp CCSTTCEEEECCSCTTCCSCEEEECCEEETT-TTEEEEEEECC---------CTTSHHHHHHTCCTTC------EEEEEE
T ss_pred cCCCCceEEEEcCCCCceeeEEEEeeeecCC-CCEEEEEEEEe---------cCCchHHHHhcCCCCC------EEEEEc
Confidence 45799999998775 57899999999864 57899999853 2499999999999998 999999
Q ss_pred eCCC-ccCCCC-CCCCEEEEccCcccchhHHHHHHHHHHhhcCCCCCCeEEEEecccCCcccccHHHHHHHHHcCCccEE
Q 014169 267 RPSN-FKLPAN-PSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISEL 344 (429)
Q Consensus 267 p~g~-F~lp~~-~~~pii~Ia~GtGIAP~~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~~eL~~~~~~~~~~~l 344 (429)
|.|. |.++.+ ..+++||||+|||||||++|++++... ..+++|+||+|+++ |++|.+||++++.. ++
T Consensus 97 P~G~~f~l~~~~~~~~~lliagGtGitP~~s~l~~l~~~------~~~v~l~~~~r~~~-~~~~~~el~~l~~~----~~ 165 (262)
T 1ep3_B 97 PLGNGFPVAEVTSTDKILIIGGGIGVPPLYELAKQLEKT------GCQMTILLGFASEN-VKILENEFSNLKNV----TL 165 (262)
T ss_dssp EESBCCCCTTCCTTSEEEEEEEGGGSHHHHHHHHHHHHH------TCEEEEEEEESSGG-GCCCHHHHHTSTTE----EE
T ss_pred ccCCCccCCCccCCCeEEEEECcCcHHHHHHHHHHHHHc------CCeEEEEEEcCCHH-HhhhHHHHhhhccC----cE
Confidence 9996 998864 468999999999999999999998762 26899999999999 99999999986532 34
Q ss_pred EEEEecCCC--CccchhhhHHHhHHHHHHhhcCCcEEEEeCCCchhHHHHHHHHHHH
Q 014169 345 ILAFSREGS--QKEYVQHKMMDKAAQLWSLLSKEGYLYVCGDAKGMARDVHRTLHTI 399 (429)
Q Consensus 345 ~~a~Sr~~~--~k~yvq~~l~~~~~~l~~~l~~~~~vyvCGp~~~M~~~v~~~L~~i 399 (429)
+++ +++++ .++++++.+.+. +.+++.||+||| +.|++++++ |.+.
T Consensus 166 ~~~-~~~~~~~~~g~v~~~l~~~-------~~~~~~vyvCGp-~~m~~~v~~-l~~~ 212 (262)
T 1ep3_B 166 KIA-TDDGSYGTKGHVGMLMNEI-------DFEVDALYTCGA-PAMLKAVAK-KYDQ 212 (262)
T ss_dssp EEE-ETTCSSSEESCHHHHHHHC-------CSCCSEEEEESC-HHHHHHHHH-HTTT
T ss_pred EEE-ECCCCCcceeehHHHHHhh-------ccCCCEEEEECC-HHHHHHHHH-HHhC
Confidence 443 44432 357888755432 345679999999 899999998 8653
No 30
>1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet, helix-FLA five-stranded parallel beta sheet, lipid binding protein; HET: HEM FAD DGG; 1.75A {Cupriavidus necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 PDB: 3ozu_A* 3ozv_B* 3ozw_A*
Probab=99.94 E-value=4.8e-27 Score=238.00 Aligned_cols=186 Identities=19% Similarity=0.288 Sum_probs=148.3
Q ss_pred CCChHHHHHhhcC--C---CCCceeecCCCCCCCCCeeEEEEEEEEccCCCCCcccCcccHHhhh-cCCCCCCCCccEEE
Q 014169 190 TPPIGVFFAAVAP--H---LQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKN-AIPLEGNGDCSWAP 263 (429)
Q Consensus 190 ~~~~gq~l~~~~p--~---~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~~-l~~G~~~~~~~~v~ 263 (429)
.+.+|||+.+.+| + ..+|+|||+|+|. .+.++|+|+.+. .++.+.|.+|+||++ +++|| .|.
T Consensus 184 ~~~pGQ~v~l~~~~~~~~~~~~R~YSi~s~p~--~~~~~i~Vk~~~----~~~~~~G~~S~~L~~~l~~Gd------~v~ 251 (403)
T 1cqx_A 184 NFEPGQYTSVAIDVPALGLQQIRQYSLSDMPN--GRTYRISVKREG----GGPQPPGYVSNLLHDHVNVGD------QVK 251 (403)
T ss_dssp CCCTTCEEEEEEEETTTTEEEEEEEECCSCCC--SSCEEEEEECCC----BTTBCCCHHHHHHHHHCCTTC------EEE
T ss_pred CCCCCCEEEEEEecCCCCcceeecceecCCCC--CCeEEEEEEECC----CCCCCCCeehHHHhhCCCCCC------EEE
Confidence 5679999999865 2 2479999999986 478999998542 112235999999995 99999 999
Q ss_pred EEEeCCCccCCCCCCCCEEEEccCcccchhHHHHHHHHHHhhcCCCCCCeEEEEecccCCcccccHHHHHHHHHcCCccE
Q 014169 264 IFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISE 343 (429)
Q Consensus 264 v~~p~g~F~lp~~~~~pii~Ia~GtGIAP~~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~~eL~~~~~~~~~~~ 343 (429)
+.+|.|.|.++.+..+|+||||+|||||||++|++++.. ....+++|+||+|+.+ |++|.+||+++++.+.+++
T Consensus 252 v~gP~G~f~l~~~~~~~~vlIagGtGitP~~s~l~~l~~-----~~~~~v~l~~~~r~~~-~~~~~~el~~l~~~~~~~~ 325 (403)
T 1cqx_A 252 LAAPYGSFHIDVDAKTPIVLISGGVGLTPMVSMLKVALQ-----APPRQVVFVHGARNSA-VHAMRDRLREAAKTYENLD 325 (403)
T ss_dssp ECCCBCSCSCCTTCCSCEEEEESSCCHHHHHHHHHHHTC-----SSCCCEEEEEEESCSS-SCHHHHHHHHHHHHCTTEE
T ss_pred EecCccCcccCCCCCCCEEEEEecccHhhHHHHHHHHHh-----CCCCcEEEEEEeCChh-hCcHHHHHHHHHHhCCCcE
Confidence 999999999975567899999999999999999998764 1457899999999999 9999999999998877788
Q ss_pred EEEEEecCCCC---------ccchhhh-HHHhHHHHHHhhcCCcEEEEeCCCchhHHHHHHHHHHHH
Q 014169 344 LILAFSREGSQ---------KEYVQHK-MMDKAAQLWSLLSKEGYLYVCGDAKGMARDVHRTLHTIV 400 (429)
Q Consensus 344 l~~a~Sr~~~~---------k~yvq~~-l~~~~~~l~~~l~~~~~vyvCGp~~~M~~~v~~~L~~i~ 400 (429)
+++++|+++.. .+++... +.+. + .+ +++.||+||| ++|+++|++.|.+.+
T Consensus 326 ~~~~~s~~~~~~~~~~~~~~~G~i~~~~l~~~---~--~~-~~~~vyvCGp-~~m~~~v~~~L~~~G 385 (403)
T 1cqx_A 326 LFVFYDQPLPEDVQGRDYDYPGLVDVKQIEKS---I--LL-PDADYYICGP-IPFMRMQHDALKNLG 385 (403)
T ss_dssp EEEEESSCCTTCCBTTTBSEESSCCGGGSHHH---H--CC-TTCEEEEESS-HHHHHHHHHHHHHTT
T ss_pred EEEEECCCCcccccccccCcCCCcCHHHHhhc---c--CC-CCCEEEEeCC-HHHHHHHHHHHHHcC
Confidence 99999987542 2344332 2110 0 12 3789999999 899999999987654
No 31
>2qdx_A Ferredoxin reductase; oxidoreductase; HET: FAD; 1.55A {Pseudomonas aeruginosa} PDB: 3crz_A* 1a8p_A*
Probab=99.94 E-value=5.8e-28 Score=229.94 Aligned_cols=189 Identities=16% Similarity=0.173 Sum_probs=149.1
Q ss_pred CCCChHHHHHhhcCC---CCCceeecCCCCCCCCCeeEEEEEEEEccCCCCCcccCcccHHhhhcCCCCCCCCccEEEEE
Q 014169 189 ATPPIGVFFAAVAPH---LQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIF 265 (429)
Q Consensus 189 ~~~~~gq~l~~~~p~---~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~~l~~G~~~~~~~~v~v~ 265 (429)
..+.+|||+.+.+|. ...|+|||+|+|.. +.++|+|+.+ ..|.+|+||+++++|+ .|.+.
T Consensus 29 ~~~~pGq~v~l~~~~~g~~~~R~ySi~s~~~~--~~~~~~i~~~---------~~G~~s~~l~~l~~Gd------~v~v~ 91 (257)
T 2qdx_A 29 LRFKTGQFVMIGLEVDGRPLMRAYSIASPNYE--EHLEFFSIKV---------PDGPLTSRLQHLKEGD------ELMVS 91 (257)
T ss_dssp CCCCTTCEEEEEEEETTEEEEEEEECCSCTTS--SEEEEEEECC---------TTCTTHHHHTTCCTTC------EEEEC
T ss_pred CccCCCCEEEEEecCCCCceeeeeEeecCCCC--CeEEEEEEEe---------CCCcchhHHHhCCCCC------EEEEe
Confidence 346899999998663 35799999999864 6889988754 2599999999999998 99999
Q ss_pred -EeCCCccCCCCC-CCCEEEEccCcccchhHHHHHHHHHHhhcCCCCCCeEEEEecccCCcccccHHHHH-HHHH-----
Q 014169 266 -IRPSNFKLPANP-SVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELN-NFEE----- 337 (429)
Q Consensus 266 -~p~g~F~lp~~~-~~pii~Ia~GtGIAP~~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~~eL~-~~~~----- 337 (429)
+|.|.|.++... .+++||||+|||||||++|++++.... ...+++|+||+|+.+ |++|.+||+ ++++
T Consensus 92 ~gp~G~f~~~~~~~~~~~vliagG~GitP~~~~l~~l~~~~----~~~~v~l~~~~r~~~-~~~~~~el~~~l~~~~~~~ 166 (257)
T 2qdx_A 92 RKPTGTLVHDDLLPGKHLYLLSTGTGMAPFLSVIQDPETYE----RYEKVILVHGVRWVS-ELAYADFITKVLPEHEYFG 166 (257)
T ss_dssp SCCBCSCCGGGBCSCSEEEEEEEGGGGHHHHHHTTCHHHHH----HCSEEEEEEEESSGG-GCTTHHHHHTTGGGCTTTH
T ss_pred cCCCCCccCCcccCCCeEEEEEeceEHHHHHHHHHHHHhcC----CCCeEEEEEEcCCHH-HhHhHHHHHHHHHhchhhh
Confidence 899999887542 579999999999999999999876531 236899999999998 999999999 8865
Q ss_pred c--CCccEEEEEEecCCC-CccchhhhHHHhH-HHHHHh--h-cCCcEEEEeCCCchhHHHHHHHHHHHH
Q 014169 338 E--GVISELILAFSREGS-QKEYVQHKMMDKA-AQLWSL--L-SKEGYLYVCGDAKGMARDVHRTLHTIV 400 (429)
Q Consensus 338 ~--~~~~~l~~a~Sr~~~-~k~yvq~~l~~~~-~~l~~~--l-~~~~~vyvCGp~~~M~~~v~~~L~~i~ 400 (429)
. ...++++.++|++.. .++++++.+.+.. .....+ + ..++.||+||| ++|++++++.|.+.+
T Consensus 167 ~~~~~~~~~~~~~s~~~~~~~g~v~~~l~~~~l~~~~~~~~~~~~~~~vyvCGp-~~m~~~v~~~l~~~G 235 (257)
T 2qdx_A 167 DQVKEKLIYYPLVTREPFRNQGRQTDLMRSGKLFEDIGLPPMNPQDDRAMICGS-PSMLEETSAVLDSFG 235 (257)
T ss_dssp HHHHHHEEEEEEESSSCCSSBSCHHHHHHHSHHHHHHTCCCCCTTTEEEEEEEC-HHHHHHHHHHHHHTT
T ss_pred ccCCCcEEEEEEecCCCcccCceechhhhhhhHHHhcccccCCcCCCEEEEECC-HHHHHHHHHHHHHcC
Confidence 2 245678899998743 4688988776432 111111 1 24679999999 899999999987654
No 32
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.93 E-value=1.7e-26 Score=227.06 Aligned_cols=174 Identities=16% Similarity=0.198 Sum_probs=139.8
Q ss_pred CCChHHHHHhhcCCCCCceeecCCCCCCCCCeeEEEEEEEEccCCCCCcccCc-ccHHhh-hcCCCCCCCCccEEEEEEe
Q 014169 190 TPPIGVFFAAVAPHLQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGV-CSTWMK-NAIPLEGNGDCSWAPIFIR 267 (429)
Q Consensus 190 ~~~~gq~l~~~~p~~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~~~G~-~S~~L~-~l~~G~~~~~~~~v~v~~p 267 (429)
.+.+|||+.+.+|....|+|||+|+|.. .+.++|+|+.+ ..|. +|+||+ ++++|+ .|.+.+|
T Consensus 38 ~~~pGQ~v~l~~~~g~~R~ySi~s~~~~-~~~l~i~Vk~~---------~~G~g~S~~L~~~l~~Gd------~v~v~gP 101 (321)
T 2pia_A 38 PFEAGANLTVAVPNGSRRTYSLCNDSQE-RNRYVIAVKRD---------SNGRGGSISFIDDTSEGD------AVEVSLP 101 (321)
T ss_dssp CCCTTCEEEEECTTSCEEEEECCSCTTC-CSEEEEEEECC---------TTSCSHHHHHHHSCCTTC------EEEECCC
T ss_pred CCCCCCEEEEECCCCCcEEEEeCCCCCC-CCeEEEEEEEe---------cCCcchhHHHHhcCCCCC------EEEEeCC
Confidence 4679999999877668999999999965 47899999854 2487 899999 699998 9999999
Q ss_pred CCCccCCCCCCCCEEEEccCcccchhHHHHHHHHHHhhcCCCCCCeEEEEecccCCcccccHHHHHHHHHcCCccEEEEE
Q 014169 268 PSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISELILA 347 (429)
Q Consensus 268 ~g~F~lp~~~~~pii~Ia~GtGIAP~~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~~eL~~~~~~~~~~~l~~a 347 (429)
.|.|.++.+ .+++||||+|||||||++|++++... + ..+++|+||+|+.+ |++|.+||++++ .+.. +.+.
T Consensus 102 ~g~f~l~~~-~~~~vliagG~GItP~~s~l~~l~~~---~--~~~v~l~~~~r~~~-~~~~~~el~~l~-~~~~--~~~~ 171 (321)
T 2pia_A 102 RNEFPLDKR-AKSFILVAGGIGITPMLSMARQLRAE---G--LRSFRLYYLTRDPE-GTAFFDELTSDE-WRSD--VKIH 171 (321)
T ss_dssp BCCSCCCTT-CSEEEEEEEGGGHHHHHHHHHHHHHH---C--SSEEEEEEEESCGG-GCTTHHHHHSTT-TTTT--EEEE
T ss_pred ccccccCCC-CCCEEEEEecccHhHHHHHHHHHHHc---C--CCcEEEEEEECChh-hhHHHHHHhcCc-cCCe--EEEE
Confidence 999999865 67999999999999999999998762 2 26899999999999 999999999886 3333 4455
Q ss_pred EecCCC-CccchhhhHHHhHHHHHHhhcCCcEEEEeCCCchhHHHHHHHHHH
Q 014169 348 FSREGS-QKEYVQHKMMDKAAQLWSLLSKEGYLYVCGDAKGMARDVHRTLHT 398 (429)
Q Consensus 348 ~Sr~~~-~k~yvq~~l~~~~~~l~~~l~~~~~vyvCGp~~~M~~~v~~~L~~ 398 (429)
++++.. .+.++++.+.+ ...+..||+||| ++|+++|++.|.+
T Consensus 172 ~~~~~~~g~~~~~~ll~~--------~~~~~~vyvCGP-~~m~~~v~~~l~~ 214 (321)
T 2pia_A 172 HDHGDPTKAFDFWSVFEK--------SKPAQHVYCCGP-QALMDTVRDMTGH 214 (321)
T ss_dssp ECTTCTTSCCCHHHHHSS--------CCTTEEEEEESC-HHHHHHHHHHTTT
T ss_pred ECCCcccCccCHHHHhcc--------cCCCCEEEEECC-HHHHHHHHHHHHh
Confidence 565432 23344443321 235679999999 8999999999876
No 33
>2gpj_A Siderophore-interacting protein; structural genomics, joint for structural genomics, JCSG; HET: FAD; 2.20A {Shewanella putrefaciens}
Probab=99.84 E-value=9.5e-22 Score=186.71 Aligned_cols=169 Identities=15% Similarity=0.109 Sum_probs=122.7
Q ss_pred CChHHHHHhhcCC----CCCceeecCCCCCCCCCeeEEEEEEEEccCCCCCcccCcccHHhhhcCCCCCCCCccEEEEEE
Q 014169 191 PPIGVFFAAVAPH----LQPRYYSISSSPRFAPDRVHVTCALVYGPTPTGRIHKGVCSTWMKNAIPLEGNGDCSWAPIFI 266 (429)
Q Consensus 191 ~~~gq~l~~~~p~----~~pR~YSIaSsp~~~~~~i~l~v~~v~~~~~~g~~~~G~~S~~L~~l~~G~~~~~~~~v~v~~ 266 (429)
+.+|||+.+.+|. ...|+|||+|.+. +.++|.|++.. ..|.+|+||+++++|| .|.+.+
T Consensus 39 ~~pGQ~v~l~~~~~~~~~~~R~YSi~~~~~---~~~~i~~~~~~--------~~G~~S~~l~~l~~Gd------~l~v~g 101 (252)
T 2gpj_A 39 DQESAYIKLLFPQAGERPLMRTYTIRQQRD---DEIDVDFVLHD--------TDGPASSWAKTAQVGE------LIQIGG 101 (252)
T ss_dssp CCTTCEEEEEECCTTSCCEEEEEECCEEET---TEEEEEEECCS--------SCCHHHHHHHHCCTTC------EEEEEE
T ss_pred CCCCCeEEEEcccCCCCCCCCceeeeccCC---CEEEEEEEEeC--------CCCcHHHHHhhCCCCC------EEEEec
Confidence 5799999998774 3569999999764 56777766431 1289999999999999 999999
Q ss_pred eCCCccCCCCCCCCEEEEccCcccchhHHHHHHHHHHhhcCCCCCCeEEEEecccCCcccccHHHHHHHHHcCCccEEEE
Q 014169 267 RPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISELIL 346 (429)
Q Consensus 267 p~g~F~lp~~~~~pii~Ia~GtGIAP~~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~~eL~~~~~~~~~~~l~~ 346 (429)
|.|.|.++.+ .++++|||+|||||||++|++++.. ..++++++++|+.+ |.... + ....++++.
T Consensus 102 P~G~f~l~~~-~~~~lliagGtGitPi~s~l~~l~~-------~~~~~~~~~~~~~~-d~~~l---~----~~~~~~v~~ 165 (252)
T 2gpj_A 102 PGLKKLINFE-ADWFLLAGDMTALPAISVNLAKLPN-------NAVGYAVIEVLSEA-DIQPL---V----HPEHVELHW 165 (252)
T ss_dssp EECCCCCCSS-SSEEEEEEEGGGHHHHHHHHHHSCT-------TCEEEEEEEESSGG-GCCCC---C----CCTEEEEEE
T ss_pred CCCCCcCCCC-CceEEEEcchhhHHHHHHHHHhCCC-------CCcEEEEEEECCHH-Hhhcc---c----CCCCcEEEE
Confidence 9999998754 4799999999999999999998632 25778999999987 65432 1 223456666
Q ss_pred EEecCCCC-ccchhhhHHHhHHHHHHh-h-cCCcEEEEeCCCchhHHHHHHHHH-HHH
Q 014169 347 AFSREGSQ-KEYVQHKMMDKAAQLWSL-L-SKEGYLYVCGDAKGMARDVHRTLH-TIV 400 (429)
Q Consensus 347 a~Sr~~~~-k~yvq~~l~~~~~~l~~~-l-~~~~~vyvCGp~~~M~~~v~~~L~-~i~ 400 (429)
+++.+... ...+.+.+ .++ + ..+..+|+||| ++|++++++.|. +.+
T Consensus 166 ~~~~~~~~~g~~~~~~l-------~~~~~~~~~~~vy~CGP-~~m~~av~~~l~~~~G 215 (252)
T 2gpj_A 166 VINPEADPEGRPLVERI-------AQLPWLAGEPAVWIACE-FNSMRALRRHFKQAHA 215 (252)
T ss_dssp EECSSCCTTCHHHHHHH-------TTSCCCSSCEEEEEEEE-HHHHHHHHHHHHHHCC
T ss_pred EeCCCCCcccHHHHHHH-------HhccCCCCCcEEEEEcC-HHHHHHHHHHHHHhcC
Confidence 66554321 11122222 221 1 23568999999 899999999987 444
No 34
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=99.79 E-value=4.6e-20 Score=162.72 Aligned_cols=128 Identities=9% Similarity=-0.015 Sum_probs=85.0
Q ss_pred cCCCCCCCCccE-EEEEEeCCCccCCCCCCCCEEEEccCcccchhHHHHHHHHHHhhcCCCCCCeEEEEecccCCccccc
Q 014169 250 AIPLEGNGDCSW-APIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIY 328 (429)
Q Consensus 250 l~~G~~~~~~~~-v~v~~p~g~F~lp~~~~~pii~Ia~GtGIAP~~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly 328 (429)
+++|| . +.+.+|.|.|.... ..++++|||||||||||+||+++... . ..+++|+ |+|+.+ |++|
T Consensus 1 L~~Gd------~vl~v~gP~G~~f~~~-~~~~~llIaGG~GItPl~sm~~~l~~---~---~~~v~l~-g~r~~~-d~~~ 65 (158)
T 3lrx_A 1 MKEGD------SLLNVAGPLGTPVPME-KFGKILAIGAYTGIVEVYPIAKAWQE---I---GNDVTTL-HVTFEP-MVIL 65 (158)
T ss_dssp -----------------CCCCCCBCCC-CCSEEEEEEETTHHHHHHHHHHHHHH---H---TCEEEEE-EECBGG-GCCS
T ss_pred CcCCC------EeeEEECCCCCCCccC-CCCeEEEEEccCcHHHHHHHHHHHHh---c---CCcEEEE-EeCCHH-HhhH
Confidence 46787 8 59999999755433 46899999999999999999998865 2 2479999 999999 9999
Q ss_pred HHHHHHHHHcCCccEEEEEEecCCC--------CccchhhhHHHhHHHHHHhhcCCcEEEEeCCCchhHHHHHHHHHHHH
Q 014169 329 EDELNNFEEEGVISELILAFSREGS--------QKEYVQHKMMDKAAQLWSLLSKEGYLYVCGDAKGMARDVHRTLHTIV 400 (429)
Q Consensus 329 ~~eL~~~~~~~~~~~l~~a~Sr~~~--------~k~yvq~~l~~~~~~l~~~l~~~~~vyvCGp~~~M~~~v~~~L~~i~ 400 (429)
.+||++++.+ ..+..+++++.. .++++++.+.+... + .+...||+||| ++|++++.+.|.+.+
T Consensus 66 ~~el~~l~~~---~~~~~v~~~~~~~~~~~~~g~~G~v~~~l~~~l~---~--~~~~~vy~CGP-~~mm~~v~~~l~~~G 136 (158)
T 3lrx_A 66 KEELEKAVTR---HIVEPVPLNPNQDFLANMKNVSQRLKEKVRELLE---S--EDWDLVFMVGP-VGDQKQVFEVVKEYG 136 (158)
T ss_dssp HHHHHHHSSE---EEECCBCCCTTSCHHHHHHHHHHHHHHHHHHHHH---H--SCCSEEEEESC-HHHHHHHHHHHGGGT
T ss_pred HHHHHHHHhc---eEEEEeeccccccCCCCCCCCcccccHHHHHhhc---c--CCCCEEEEECC-HHHHHHHHHHHHHcC
Confidence 9999998642 223323333211 24566554433211 1 14568999999 899999999887764
Q ss_pred H
Q 014169 401 Q 401 (429)
Q Consensus 401 ~ 401 (429)
.
T Consensus 137 v 137 (158)
T 3lrx_A 137 V 137 (158)
T ss_dssp C
T ss_pred C
Confidence 3
No 35
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=99.76 E-value=1.1e-18 Score=151.16 Aligned_cols=122 Identities=10% Similarity=0.016 Sum_probs=86.2
Q ss_pred EEEEEeCCCccCCCCCCCCEEEEccCcccchhHHHHHHHHHHhhcCCCCCCeEEEEecccCCcccccHHHHHHHHHcCCc
Q 014169 262 APIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVI 341 (429)
Q Consensus 262 v~v~~p~g~F~lp~~~~~pii~Ia~GtGIAP~~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~~eL~~~~~~~~~ 341 (429)
+.+.+|.|.|...++ .++++||||||||||++|++++... ...++.|+ |+|+++ |++|.+||++++.+
T Consensus 3 ~~v~GP~G~~~~~~~-~~~~llIaGG~GiaPl~sm~~~l~~------~~~~v~l~-g~R~~~-~~~~~~el~~l~~~--- 70 (142)
T 3lyu_A 3 LNVAGPLGTPVPMEK-FGKILAIGAYTGIVEVYPIAKAWQE------IGNDVTTL-HVTFEP-MVILKEELEKAVTR--- 70 (142)
T ss_dssp ----CCCSCCBCCCC-CSEEEEEEETTHHHHHHHHHHHHHH------TTCEEEEE-EEEEGG-GCCSHHHHHTTSSE---
T ss_pred eeeeCCCCCCccCCC-CCeEEEEECcCcHHHHHHHHHHHHh------cCCcEEEE-EeCCHH-HhhHHHHHHHHHhh---
Confidence 578999997765543 6899999999999999999998765 23579999 999999 99999999987542
Q ss_pred cEEEEEEecCCC--------CccchhhhHHHhHHHHHHhhcCCcEEEEeCCCchhHHHHHHHHHHHHH
Q 014169 342 SELILAFSREGS--------QKEYVQHKMMDKAAQLWSLLSKEGYLYVCGDAKGMARDVHRTLHTIVQ 401 (429)
Q Consensus 342 ~~l~~a~Sr~~~--------~k~yvq~~l~~~~~~l~~~l~~~~~vyvCGp~~~M~~~v~~~L~~i~~ 401 (429)
..+..+++++.. .+++|.+.+.+... + .+...||+||| ++|+++|.+.+.+...
T Consensus 71 ~~~~~~~~~~~~~~~d~~~g~~G~v~~~l~~~~~---~--~~~~~vy~CGP-~~Mm~av~~~l~~~~~ 132 (142)
T 3lyu_A 71 HIVEPVPLNPNQDFLANMKNVSQRLKEKVRELLE---S--EDWDLVFMVGP-VGDQKQVFEVVKEYGV 132 (142)
T ss_dssp EEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHH---S--SCCSEEEEESC-HHHHHHHHHHHHHHTC
T ss_pred eEEEEeecccccCCCCCCCCCccchhHHHHHhcc---c--CCCCEEEEECC-HHHHHHHHHHHHHcCC
Confidence 234444444321 23555554433211 1 13468999999 8999999999887653
No 36
>3a1f_A Cytochrome B-245 heavy chain; GP91(PHOX), NADPH binding domain, oxidoreductase; 2.00A {Homo sapiens}
Probab=99.76 E-value=5.2e-19 Score=159.03 Aligned_cols=137 Identities=14% Similarity=0.183 Sum_probs=94.9
Q ss_pred EEEEeCCCccCCCCCCCCEEEEccCcccchhHHHHHHHHHHhhc---CCCCCCeEEEEecccCCcccc-cHHHHHHHHHc
Q 014169 263 PIFIRPSNFKLPANPSVPIIMVGPGTGLAPFRGFLQERMALKQD---GAQLGPALLFFGCRNRRMDFI-YEDELNNFEEE 338 (429)
Q Consensus 263 ~v~~p~g~F~lp~~~~~pii~Ia~GtGIAP~~s~l~~~~~~~~~---~~~~~~~~L~~G~R~~~~d~l-y~~eL~~~~~~ 338 (429)
.|.+|+|.|.++....+++||||||||||||++|++++...... +....+++|+||+|+.+ +++ |.++|+++++.
T Consensus 2 ~v~GP~G~~~~~~~~~~~~vlIagG~GItP~~s~l~~l~~~~~~~~~~~~~~~v~l~~~~r~~~-~~~w~~~~l~~l~~~ 80 (186)
T 3a1f_A 2 AVDGPFGTASEDVFSYEVVMLVGAGIGVTPFASILKSVWYKYCNNATNLKLKKIYFYWLCRDTH-AFEWFADLLQLLESQ 80 (186)
T ss_dssp CTTSTTSHHHHHHTTSSEEEEEEEGGGHHHHHHHHHHHHHHHHHCTTCCCCCEEEEEEEESCTT-TTHHHHHHHHHHHHH
T ss_pred eEECCCCCCccChhhCCeEEEEecCccHHHHHHHHHHHHHHHhhcccCCCCcEEEEEEEECCcc-hHHHHHHHHHHHHHH
Confidence 45789998876544467999999999999999999998764321 11357899999999999 888 99999999875
Q ss_pred ------CCccEEEEEEecCCCC---ccchh-----------------hhHHH--hHHHHHHhhc-CCcEEEEeCCCchhH
Q 014169 339 ------GVISELILAFSREGSQ---KEYVQ-----------------HKMMD--KAAQLWSLLS-KEGYLYVCGDAKGMA 389 (429)
Q Consensus 339 ------~~~~~l~~a~Sr~~~~---k~yvq-----------------~~l~~--~~~~l~~~l~-~~~~vyvCGp~~~M~ 389 (429)
..++++++++|++... ..|++ .++.. ..+.+..... .+..||+||| ++|+
T Consensus 81 ~~~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~gR~~~~~~~~~~~~~~~~~~~~v~~CGP-~~m~ 159 (186)
T 3a1f_A 81 MQERNNAGFLSYNIYLTGWDESQANHFAVHHDEEKDVITGLKQKTLYGRPNWDNEFKTIASQHPNTRIGVFLCGP-EALA 159 (186)
T ss_dssp HHHTTCTTSEEEEEEETTC-----------------------CCEEESCCCHHHHHHHHHHHSTTCEEEEEEESC-HHHH
T ss_pred HhhccCCCeEEEEEEEcCCCCCcccceeeccccccccCCCCccccccCCCCHHHHHHHHHHhCCCCcEEEEEeCC-HHHH
Confidence 3356788999986321 11111 11100 0111111112 3568999999 8999
Q ss_pred HHHHHHHHHHHH
Q 014169 390 RDVHRTLHTIVQ 401 (429)
Q Consensus 390 ~~v~~~L~~i~~ 401 (429)
++|+++|.+.+.
T Consensus 160 ~~v~~~l~~~g~ 171 (186)
T 3a1f_A 160 ETLSKQSISNSE 171 (186)
T ss_dssp HHHHHHHHHTCC
T ss_pred HHHHHHHHHhhc
Confidence 999999987653
No 37
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=89.59 E-value=0.93 Score=42.93 Aligned_cols=54 Identities=19% Similarity=0.343 Sum_probs=45.7
Q ss_pred CCCCCCCCCEEEEEEeeeeecCCCCCCcEEEEEEEeCCCCcccCCCCeEEEeccC
Q 014169 21 NASFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVEN 75 (429)
Q Consensus 21 ~~~~~~~~~~~~~v~~~~~Lt~~~~~~~~~~i~l~~~~~~~~y~~GD~l~v~p~N 75 (429)
...+....++.++|++.+.++..+...++++++|..+. .+.|+||.++.|..+.
T Consensus 20 ~~~~~~~~~~~~~V~~~~~~t~~~~~~~v~~~~l~~~~-~~~~~pGQ~v~l~~~~ 73 (311)
T 3lo8_A 20 LNTYKPKEPFTATIVSVESLVGPKAPGETCHIVIDHGG-NVPYWEGQSYGVIPPG 73 (311)
T ss_dssp CCSBBTTBCEEEEEEEEEECSCTTSSSCEEEEEEECTT-SSCCCTTCEEEEECSS
T ss_pred ccccCCCCCeEEEEEeeEeccCCCCCCccEEEEEeCCC-CCcccCCCEEEEeCCC
Confidence 44577888999999999999976666789999999875 5899999999998764
No 38
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2
Probab=60.66 E-value=10 Score=34.12 Aligned_cols=48 Identities=13% Similarity=0.243 Sum_probs=38.7
Q ss_pred CCCCCCCEEEEEEeeeeecCCCCCCcEEEEEEEe-C-CC---CcccCCCCeEEEeccC
Q 014169 23 SFDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDV-S-GT---GITYETGDHVGVYVEN 75 (429)
Q Consensus 23 ~~~~~~~~~~~v~~~~~Lt~~~~~~~~~~i~l~~-~-~~---~~~y~~GD~l~v~p~N 75 (429)
-+.+..++.++|++.+.+++ +++.++|.. + +. ...|+||.++.|..++
T Consensus 4 ~~~~~~~~~~~V~~~~~~~~-----~~~~l~l~~~~~~~~~~~~~~~pGQ~v~l~~~~ 56 (250)
T 1tvc_A 4 SFGEVGSFEAEVVGLNWVSS-----NTVQFLLQKRPDECGNRGVKFEPGQFMDLTIPG 56 (250)
T ss_dssp CSCCSSEEEEEBCCCEEEET-----TEEEEEECSSTTSSSSSCCSCCSCCEEEECTTS
T ss_pred ecCCcceEEEEEEEEEEcCC-----CeEEEEEEecCCCCcccccCcCCCcEEEEEeCC
Confidence 35566678899999999984 689999988 6 43 5789999999998754
No 39
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis}
Probab=54.24 E-value=24 Score=32.41 Aligned_cols=42 Identities=5% Similarity=0.169 Sum_probs=34.9
Q ss_pred CEEEEEEeeeeecCCCCCCcEEEEEEEeCC-CCcccCCCCeEEEeccC
Q 014169 29 PCRVNVAVRRELHKPDSDRSCIHLEFDVSG-TGITYETGDHVGVYVEN 75 (429)
Q Consensus 29 ~~~~~v~~~~~Lt~~~~~~~~~~i~l~~~~-~~~~y~~GD~l~v~p~N 75 (429)
.+.++|++++.+++ ++++|+|..++ ..+.|+||.++.|..+.
T Consensus 9 ~~~~~V~~~~~~t~-----~~~~l~l~~~~~~~~~~~pGQ~v~l~~p~ 51 (290)
T 2r6h_A 9 EWECEVLSNKNVST-----FIKEFVVKLPEGETMNFKSGSYAQIKIPK 51 (290)
T ss_dssp EEEEEEEEEEESSS-----SEEEEEEECSTTCCCCCCTTCEEEEEECS
T ss_pred EEEEEEEEeeecCC-----CeEEEEEEcCCCCccccCCCceEEEEccc
Confidence 47799999999985 68999999875 35789999999997654
No 40
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A*
Probab=51.87 E-value=37 Score=30.76 Aligned_cols=45 Identities=9% Similarity=0.147 Sum_probs=36.4
Q ss_pred CCCCCEEEEEEeeeeecCCCCCCcEEEEEEEeCCC--CcccCCCCeEEEecc
Q 014169 25 DIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGT--GITYETGDHVGVYVE 74 (429)
Q Consensus 25 ~~~~~~~~~v~~~~~Lt~~~~~~~~~~i~l~~~~~--~~~y~~GD~l~v~p~ 74 (429)
+....+.++|++.+.++. +++.++|.+++. ...|+||.++.|..+
T Consensus 12 ~~~~~~~~~V~~~~~~~~-----~~~~~~l~~~~~~~~~~~~pGQ~v~l~~~ 58 (275)
T 1umk_A 12 SPDIKYPLRLIDREIISH-----DTRRFRFALPSPQHILGLPVGQHIYLSAR 58 (275)
T ss_dssp CTTCCEEEEEEEEEECSS-----SEEEEEEECSSTTCBCCCCTTCEEEEEEE
T ss_pred CCCccEEEEEEEEEEcCC-----CeEEEEEEcCCcccccCCCCCcEEEEEEe
Confidence 445668899999999974 688999998753 468999999999854
No 41
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=50.06 E-value=22 Score=32.28 Aligned_cols=42 Identities=14% Similarity=0.085 Sum_probs=34.0
Q ss_pred EEEEEEeeeeecCCCCCCcEEEEEEEeCCCCcccCCCCeEEEeccCC
Q 014169 30 CRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVENC 76 (429)
Q Consensus 30 ~~~~v~~~~~Lt~~~~~~~~~~i~l~~~~~~~~y~~GD~l~v~p~N~ 76 (429)
+.++|++.+.+++ +++.++|..++....|+||.++.|..++.
T Consensus 6 ~~~~V~~~~~~t~-----~~~~l~l~~~~~~~~~~pGQ~v~l~~~~~ 47 (262)
T 1ep3_B 6 EMMTVVSQREVAY-----NIFEMVLKGTLVDEMDLPGQFLHLAVPNG 47 (262)
T ss_dssp EEEEEEEEEEEET-----TEEEEEEESGGGGGCCSTTCEEEECCSCT
T ss_pred cceEEEEEEEecC-----CEEEEEEEcCcccccCCCCceEEEEcCCC
Confidence 4689999999984 68999998765346899999999987653
No 42
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1
Probab=48.56 E-value=31 Score=30.36 Aligned_cols=40 Identities=8% Similarity=0.207 Sum_probs=33.2
Q ss_pred EEEEEEeeeeecCCCCCCcEEEEEEEeCCCCcccCCCCeEEEeccC
Q 014169 30 CRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVEN 75 (429)
Q Consensus 30 ~~~~v~~~~~Lt~~~~~~~~~~i~l~~~~~~~~y~~GD~l~v~p~N 75 (429)
+.++|++.+.+++ +++.++|..+. .+.|+||.++.|..++
T Consensus 3 ~~~~V~~~~~~~~-----~~~~l~l~~~~-~~~~~pGq~v~l~~~~ 42 (232)
T 1qfj_A 3 LSCKVTSVEAITD-----TVYRVRIVPDA-AFSFRAGQYLMVVMDE 42 (232)
T ss_dssp EEEEEEEEEESSS-----SCEEEEEEESS-CCCCCTTCEEEEESSS
T ss_pred eEEEEEEEEecCC-----CEEEEEEecCC-CCCcCCCCEEEEECCC
Confidence 5789999999974 67899998764 6799999999998753
No 43
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum}
Probab=48.15 E-value=47 Score=29.38 Aligned_cols=44 Identities=9% Similarity=0.165 Sum_probs=35.4
Q ss_pred CCCCEEEEEEeeeeecCCCCCCcEEEEEEEeCCC--CcccCCCCeEEEecc
Q 014169 26 IHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGT--GITYETGDHVGVYVE 74 (429)
Q Consensus 26 ~~~~~~~~v~~~~~Lt~~~~~~~~~~i~l~~~~~--~~~y~~GD~l~v~p~ 74 (429)
......++|++++.+++ +++.++|.+++. ...|+||.++.|..+
T Consensus 8 ~~~~~~~~v~~~~~~t~-----~~~~~~l~~~~~~~~~~~~pGq~v~l~~~ 53 (243)
T 2eix_A 8 PNEYKKFMLREKQIINH-----NTRLFRFNLHHPEDVVGLPIGQHMSVKAT 53 (243)
T ss_dssp SSSCEEEEEEEEEEEET-----TEEEEEEECSSTTCCCCCCTTCEEEEEEE
T ss_pred CCceEEEEEEEEEEeCC-----CeEEEEEEcCCCCcccCcCCceEEEEEEe
Confidence 34456799999999985 688899988752 478999999999865
No 44
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A*
Probab=47.38 E-value=34 Score=30.92 Aligned_cols=45 Identities=13% Similarity=0.262 Sum_probs=34.8
Q ss_pred CCCCCEEEEEEeeeeecCCCCCCcEEEEEEEeCCC--CcccCCCCeEEEecc
Q 014169 25 DIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGT--GITYETGDHVGVYVE 74 (429)
Q Consensus 25 ~~~~~~~~~v~~~~~Lt~~~~~~~~~~i~l~~~~~--~~~y~~GD~l~v~p~ 74 (429)
+....+.++|++++.+++ +++.++|..++. ...|+||.++.|..+
T Consensus 8 ~~~~~~~~~v~~~~~~~~-----~~~~~~l~~~~~~~~~~~~pGQ~v~l~~~ 54 (270)
T 2cnd_A 8 NPRGRIHCRLVAKKELSR-----DVRLFRFSLPSPDQVLGLPIGKHIFVCAT 54 (270)
T ss_dssp ---CCEEEEEEEEEEEET-----TEEEEEEECSSTTCCCCCCTTCEEEEEEE
T ss_pred CCCceEEEEEEEEEEeCC-----CeEEEEEECCCCccccCCCCCCEEEEEee
Confidence 344568899999999985 688999998753 468999999999754
No 45
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=47.06 E-value=34 Score=32.28 Aligned_cols=43 Identities=21% Similarity=0.310 Sum_probs=35.5
Q ss_pred CCEEEEEEeeeeecCCCCCCcEEEEEEEeCCC--CcccCCCCeEEEeccC
Q 014169 28 HPCRVNVAVRRELHKPDSDRSCIHLEFDVSGT--GITYETGDHVGVYVEN 75 (429)
Q Consensus 28 ~~~~~~v~~~~~Lt~~~~~~~~~~i~l~~~~~--~~~y~~GD~l~v~p~N 75 (429)
.++.++|++.+.+++ +++.++|..++. ...|+||.++.|..++
T Consensus 107 ~~~~~~V~~~~~~~~-----~~~~l~l~~~~~~~~~~~~pGQ~v~l~~~~ 151 (338)
T 1krh_A 107 HHFEGTLARVENLSD-----STITFDIQLDDGQPDIHFLAGQYVNVTLPG 151 (338)
T ss_dssp EEEEEEEEEEEESSS-----SEEEEEEEECTTCCCCCCCTTCEEEEECTT
T ss_pred eEEEEEEEEEEEcCC-----CEEEEEEEeCCCCCCCCcCCCCeEEEEcCC
Confidence 346789999999984 689999998763 5889999999998654
No 46
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=46.30 E-value=43 Score=31.37 Aligned_cols=44 Identities=18% Similarity=0.276 Sum_probs=35.6
Q ss_pred CCCEEEEEEeeeeecCCCCCCcEEEEEEEeCCC-C-cccCCCCeEEEeccC
Q 014169 27 HHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGT-G-ITYETGDHVGVYVEN 75 (429)
Q Consensus 27 ~~~~~~~v~~~~~Lt~~~~~~~~~~i~l~~~~~-~-~~y~~GD~l~v~p~N 75 (429)
...+.++|++.+.+++ +++.++|..++. . ..|+||.++.|..++
T Consensus 6 ~~~~~~~V~~~~~~t~-----~~~~l~l~~~~~~~~~~~~pGQ~v~l~~~~ 51 (321)
T 2pia_A 6 DGFLRLKIASKEKIAR-----DIWSFELTDPQGAPLPPFEAGANLTVAVPN 51 (321)
T ss_dssp TTCEEEEEEEEEEEET-----TEEEEEEECTTCCCCCCCCTTCEEEEECTT
T ss_pred CCcEEEEEEEEEEcCC-----CEEEEEEEcCCCCcCCCCCCCCEEEEECCC
Confidence 3457899999999984 689999998763 2 389999999998764
No 47
>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A*
Probab=44.98 E-value=35 Score=31.02 Aligned_cols=46 Identities=11% Similarity=0.125 Sum_probs=34.7
Q ss_pred CCCCCCEEEEEEeeeeecCCCCCCcEEEEEEEeCCCCcccCCCCeEEEeccC
Q 014169 24 FDIHHPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVEN 75 (429)
Q Consensus 24 ~~~~~~~~~~v~~~~~Lt~~~~~~~~~~i~l~~~~~~~~y~~GD~l~v~p~N 75 (429)
..+..++.++|++.+.+++ +++.++|..++ .+.|+||.++.|..+.
T Consensus 11 ~~~~~~~~~~V~~~~~~~~-----~~~~l~l~~~~-~~~~~pGQ~v~l~~~~ 56 (272)
T 2bgi_A 11 PAKVLPDAQTVTSVRHWTD-----TLFSFRVTRPQ-TLRFRSGEFVMIGLLD 56 (272)
T ss_dssp -----CEEEEEEEEEEEET-----TEEEEEEECCT-TCCCCTTCEEEEEEEC
T ss_pred eEEEEeEEEEEEEEEEcCC-----CEEEEEEeCCC-CCccCCCCEEEEEecc
Confidence 3445678899999999985 68899998765 5789999999998763
No 48
>2qdx_A Ferredoxin reductase; oxidoreductase; HET: FAD; 1.55A {Pseudomonas aeruginosa} PDB: 3crz_A* 1a8p_A*
Probab=42.47 E-value=46 Score=29.83 Aligned_cols=41 Identities=15% Similarity=0.191 Sum_probs=33.8
Q ss_pred CEEEEEEeeeeecCCCCCCcEEEEEEEeCCCCcccCCCCeEEEeccC
Q 014169 29 PCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVEN 75 (429)
Q Consensus 29 ~~~~~v~~~~~Lt~~~~~~~~~~i~l~~~~~~~~y~~GD~l~v~p~N 75 (429)
.+.++|++.+.+++ +++.++|..++ ...|+||.++.|..+.
T Consensus 3 ~~~~~V~~~~~~~~-----~~~~l~l~~~~-~~~~~pGq~v~l~~~~ 43 (257)
T 2qdx_A 3 LYTERVLSVHHWND-----TLFSFKTTRNP-GLRFKTGQFVMIGLEV 43 (257)
T ss_dssp SEEEEEEEEEEEET-----TEEEEEEECCT-TCCCCTTCEEEEEEEE
T ss_pred eEEEEEEEEEEcCC-----CeEEEEEeCCC-CCccCCCCEEEEEecC
Confidence 46789999999985 68899988764 5789999999998763
No 49
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=40.58 E-value=20 Score=34.38 Aligned_cols=24 Identities=25% Similarity=0.346 Sum_probs=20.6
Q ss_pred CCEEEEccCcc--cchhHHHHHHHHH
Q 014169 279 VPIIMVGPGTG--LAPFRGFLQERMA 302 (429)
Q Consensus 279 ~pii~Ia~GtG--IAP~~s~l~~~~~ 302 (429)
+.|++.||||| |.|.+++.+++..
T Consensus 3 ~~i~i~~GGTgGHi~palala~~L~~ 28 (365)
T 3s2u_A 3 GNVLIMAGGTGGHVFPALACAREFQA 28 (365)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHH
T ss_pred CcEEEEcCCCHHHHHHHHHHHHHHHh
Confidence 57899999997 8899999998765
No 50
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A*
Probab=37.48 E-value=45 Score=30.12 Aligned_cols=41 Identities=10% Similarity=0.109 Sum_probs=34.1
Q ss_pred CCEEEEEEeeeeecCCCCCCcEEEEEEEeCCCCcccCCCCeEEEecc
Q 014169 28 HPCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVE 74 (429)
Q Consensus 28 ~~~~~~v~~~~~Lt~~~~~~~~~~i~l~~~~~~~~y~~GD~l~v~p~ 74 (429)
..+.++|++.+.+++ +++.++|..++ ...|+||.++.|..+
T Consensus 18 ~~~~~~V~~~~~~~~-----~~~~~~l~~~~-~~~~~pGQ~v~l~~~ 58 (271)
T 4fk8_A 18 KFDTATVLSVHHWTD-----TLFSFTCTRDQ-ALRFNNGEFTMVGLE 58 (271)
T ss_dssp CEEEEEEEEEEEEET-----TEEEEEECCCT-TCCCCTTCEEEEEEE
T ss_pred cceeEEEEEEEEcCC-----CEEEEEEEcCC-CCCcCCCCEEEEEcc
Confidence 446789999999985 68889888765 689999999999865
No 51
>2lnb_A Z-DNA-binding protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, immune system; NMR {Homo sapiens}
Probab=36.94 E-value=76 Score=23.47 Aligned_cols=26 Identities=4% Similarity=0.043 Sum_probs=22.1
Q ss_pred HHccCCCHHHHHHHHHHHHHCCCeEE
Q 014169 401 QEQENVDSSKAESIVKKFQMEGRYLR 426 (429)
Q Consensus 401 ~~~~~~~~~~a~~~~~~l~~~~Ry~~ 426 (429)
++..|++..+....+++|+++|+..-
T Consensus 41 ae~~GvdKKeVdKaik~LKkEgkI~S 66 (80)
T 2lnb_A 41 VKECQAPKRELNQVLYRMKKELKVSL 66 (80)
T ss_dssp HHHHTSCHHHHHHHHHHHHHTTSEEE
T ss_pred HHHHCCCHHHHHHHHHHHHHcCCccC
Confidence 45578999999999999999998753
No 52
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor}
Probab=35.54 E-value=95 Score=27.24 Aligned_cols=41 Identities=12% Similarity=0.140 Sum_probs=33.2
Q ss_pred EEEEEEeeeeecCCCCCCcEEEEEEEeCCC--CcccCCCCeEEEeccC
Q 014169 30 CRVNVAVRRELHKPDSDRSCIHLEFDVSGT--GITYETGDHVGVYVEN 75 (429)
Q Consensus 30 ~~~~v~~~~~Lt~~~~~~~~~~i~l~~~~~--~~~y~~GD~l~v~p~N 75 (429)
-.++|++.+.+++ +++.++|..++. ...|+||.++.|..+.
T Consensus 4 ~~~~V~~~~~~~~-----~~~~~~l~~~~~~~~~~~~pGq~v~l~~~~ 46 (243)
T 4eh1_A 4 RTFVVREKQVESA-----YVTSFVLVPADGGAVLDYQPGQYIGIEVTP 46 (243)
T ss_dssp EEEEEEEEEECSS-----SEEEEEEEESSCSCCCCCCTTCEEEEEECC
T ss_pred EEEEEEEEEEcCC-----CeEEEEEEeCCCCcCCCcCCCCEEEEEEec
Confidence 3578999998874 689999998753 3789999999998764
No 53
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5
Probab=32.20 E-value=93 Score=29.84 Aligned_cols=41 Identities=12% Similarity=0.256 Sum_probs=33.4
Q ss_pred CEEEEEEeeeeecCCCCCCcEEEEEEEeCCC--CcccCCCCeEEEecc
Q 014169 29 PCRVNVAVRRELHKPDSDRSCIHLEFDVSGT--GITYETGDHVGVYVE 74 (429)
Q Consensus 29 ~~~~~v~~~~~Lt~~~~~~~~~~i~l~~~~~--~~~y~~GD~l~v~p~ 74 (429)
...++|++.+.+++ +++.++|..++. -..|+||.++.|..+
T Consensus 152 ~~~~~V~~~~~~s~-----~i~~~~l~~~~~~~~~~~~pGQ~v~l~~~ 194 (396)
T 1gvh_A 152 TRDFRIVAKTPRSA-----LITSFELEPVDGGAVAEYRPGQYLGVWLK 194 (396)
T ss_dssp EEEEEEEEEEECSS-----SEEEEEEEETTCCCCCCCCTTCEEEEEEC
T ss_pred cEEEEEEEEEEcCC-----CeEEEEEEeCCCCcCCCCCCCCeEEEEec
Confidence 35689999999974 788999998753 258999999999876
No 54
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A*
Probab=31.78 E-value=92 Score=27.48 Aligned_cols=40 Identities=10% Similarity=0.106 Sum_probs=32.2
Q ss_pred CEEEEEEeeeeecCCCCCCcEEEEEEEeCCCCcccCCCCeEEEeccC
Q 014169 29 PCRVNVAVRRELHKPDSDRSCIHLEFDVSGTGITYETGDHVGVYVEN 75 (429)
Q Consensus 29 ~~~~~v~~~~~Lt~~~~~~~~~~i~l~~~~~~~~y~~GD~l~v~p~N 75 (429)
.+.++|++++.+++ +++.++|. + ....|+||.++.|..+.
T Consensus 4 ~~~~~V~~~~~~~~-----~~~~l~l~-~-~~~~~~pGq~v~l~~~~ 43 (248)
T 1fdr_A 4 WVTGKVTKVQNWTD-----ALFSLTVH-A-PVLPFTAGQFTKLGLEI 43 (248)
T ss_dssp EEEEEEEEEEECSS-----SEEEEEEE-C-CCCCCCTTCEEEEEECC
T ss_pred eEEEEEEEEEEcCC-----CEEEEEEe-C-CCCCcCCCCcEEEEccC
Confidence 35689999999974 68889886 4 35789999999998764
No 55
>2gpj_A Siderophore-interacting protein; structural genomics, joint for structural genomics, JCSG; HET: FAD; 2.20A {Shewanella putrefaciens}
Probab=29.48 E-value=92 Score=27.88 Aligned_cols=44 Identities=9% Similarity=0.205 Sum_probs=34.2
Q ss_pred CCEEEEEEeeeeecCCCCCCcEEEEEEEeCCC-Cc-ccCCCCeEEEeccCC
Q 014169 28 HPCRVNVAVRRELHKPDSDRSCIHLEFDVSGT-GI-TYETGDHVGVYVENC 76 (429)
Q Consensus 28 ~~~~~~v~~~~~Lt~~~~~~~~~~i~l~~~~~-~~-~y~~GD~l~v~p~N~ 76 (429)
..+.++|++++.+++ +++.|+|..++. .. .|+||.+|.|..+++
T Consensus 7 ~~~~~~V~~~~~~t~-----~~~~l~l~~~~~~~~~~~~pGQ~v~l~~~~~ 52 (252)
T 2gpj_A 7 APRELEVIRSTYITP-----HMLRITLGGAGLAGFPADQESAYIKLLFPQA 52 (252)
T ss_dssp CCEEEEEEEEEEEET-----TEEEEEEESGGGTTCCSCCTTCEEEEEECCT
T ss_pred CcEEEEEEEEEEcCC-----CEEEEEEEcCChhhcCCCCCCCeEEEEcccC
Confidence 346789999999985 689999987652 23 589999999976643
No 56
>3nrs_A Dihydrofolate:folylpolyglutamate synthetase; structural genomics, center for structural genomics of infec diseases, csgid; HET: TLA MES; 1.80A {Yersinia pestis} PDB: 3n2a_A* 3pyz_A* 3qcz_A*
Probab=29.33 E-value=2.8e+02 Score=27.02 Aligned_cols=106 Identities=15% Similarity=0.206 Sum_probs=55.7
Q ss_pred CCEEEEccCcccchhHHHHHHHH------HHhhcCCCCCCeEEEEecccCCcccccHHHHHHHHHcCCccEEEEEEecCC
Q 014169 279 VPIIMVGPGTGLAPFRGFLQERM------ALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISELILAFSREG 352 (429)
Q Consensus 279 ~pii~Ia~GtGIAP~~s~l~~~~------~~~~~~~~~~~~~L~~G~R~~~~d~ly~~eL~~~~~~~~~~~l~~a~Sr~~ 352 (429)
.|.+++=++.=-.-+.++++... .. ...+++++++|+-... |+ ++-+..++.. ...++ ++.-+.
T Consensus 311 ~~~vi~D~AHNp~a~~all~~l~~~~~~~~~----~~~~r~i~V~G~~~dk-d~--~~~~~~l~~~--~~~v~-~~~~~~ 380 (437)
T 3nrs_A 311 QPLLILDVAHNPHAARYLVNRLAQVINPVNA----SKQGKVRAVVGMLSDK-DI--AGTLACLSER--VDEWY-CAPLEG 380 (437)
T ss_dssp TTEEEECCCCSHHHHHHHHHHHHHTC------------CCEEEEECCBTTB-CH--HHHHHHHTTT--CCEEE-ECCCSS
T ss_pred CCeEEEECCCCHHHHHHHHHHHHhhcchhhh----cCCCCEEEEEeCCCCC-CH--HHHHHHHHhc--CCEEE-EeCCCC
Confidence 46677776655555677776654 21 1246899999987654 64 5555555432 22233 333222
Q ss_pred CC------------c-cchhhhHHHhHHHHHHhhcCCcEEEEeCCCchhHHHHHHHH
Q 014169 353 SQ------------K-EYVQHKMMDKAAQLWSLLSKEGYLYVCGDAKGMARDVHRTL 396 (429)
Q Consensus 353 ~~------------k-~yvq~~l~~~~~~l~~~l~~~~~vyvCGp~~~M~~~v~~~L 396 (429)
.. . .++.+ +.+-.+.+.+...++..|.+||+ -.|+.++++.+
T Consensus 381 ~r~~~~~~l~~~~~~~~~~~d-~~~Ai~~a~~~a~~~D~VLv~GS-~~~v~~~~~~~ 435 (437)
T 3nrs_A 381 PRGASAGQLAEHLVSARQFSD-VETAWRQAMQDADTQDVVIVCGS-FHTVAHVMAAL 435 (437)
T ss_dssp TTBCCHHHHHTTCSSCEECSS-HHHHHHHHHHHCCTTCEEEEESS-HHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHhhCCCcCC-HHHHHHHHHHhcCCCCeEEEEeh-HHHHHHHHHHh
Confidence 10 0 01111 11111222233356788999999 78888887654
No 57
>1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet, helix-FLA five-stranded parallel beta sheet, lipid binding protein; HET: HEM FAD DGG; 1.75A {Cupriavidus necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 PDB: 3ozu_A* 3ozv_B* 3ozw_A*
Probab=25.58 E-value=1.6e+02 Score=28.20 Aligned_cols=41 Identities=10% Similarity=0.138 Sum_probs=33.2
Q ss_pred CEEEEEEeeeeecCCCCCCcEEEEEEEeCCC--CcccCCCCeEEEecc
Q 014169 29 PCRVNVAVRRELHKPDSDRSCIHLEFDVSGT--GITYETGDHVGVYVE 74 (429)
Q Consensus 29 ~~~~~v~~~~~Lt~~~~~~~~~~i~l~~~~~--~~~y~~GD~l~v~p~ 74 (429)
...++|++++.++. +++.++|..++. -..|+||.++.|..+
T Consensus 154 ~~~~~V~~~~~~s~-----~i~~~~l~~~~~~~~~~~~pGQ~v~l~~~ 196 (403)
T 1cqx_A 154 WRTFVIREKRPESD-----VITSFILEPADGGPVVNFEPGQYTSVAID 196 (403)
T ss_dssp CEEEEEEEEEECSS-----SEEEEEEEETTCCCCCCCCTTCEEEEEEE
T ss_pred ceeEEEEEEEEcCC-----CeEEEEEEeCCCCcCCCCCCCCEEEEEEe
Confidence 35689999999974 788999988653 258999999999876
No 58
>1w78_A FOLC bifunctional protein; DHFS, dihydrofolate synthase, synthase, ATP-binding, folate biosynthesis, ligase, multifunctional enzyme; HET: KCX PD8 ADP; 1.82A {Escherichia coli} PDB: 1w7k_A*
Probab=23.66 E-value=4.9e+02 Score=24.92 Aligned_cols=107 Identities=14% Similarity=0.182 Sum_probs=54.8
Q ss_pred CEEEEccCcccchhHHHHHHHHHHhhcCCCCCCeEEEEecccCCcccccHHHHHHHHHcCCccEEEEEEecCCCC---c-
Q 014169 280 PIIMVGPGTGLAPFRGFLQERMALKQDGAQLGPALLFFGCRNRRMDFIYEDELNNFEEEGVISELILAFSREGSQ---K- 355 (429)
Q Consensus 280 pii~Ia~GtGIAP~~s~l~~~~~~~~~~~~~~~~~L~~G~R~~~~d~ly~~eL~~~~~~~~~~~l~~a~Sr~~~~---k- 355 (429)
+.+++=.+.=-.-+.+.++..... ...+++++++|+-... |+ ++.+..+... ...++ ++..+... .
T Consensus 297 ~~~i~D~Ahnp~s~~~~l~~l~~~----~~~~~~i~V~g~~~~k-d~--~~~~~~l~~~--~d~vi-~~~~~~~r~~~~~ 366 (422)
T 1w78_A 297 PRVIFDVAHNPHAAEYLTGRMKAL----PKNGRVLAVIGMLHDK-DI--AGTLAWLKSV--VDDWY-CAPLEGPRGATAE 366 (422)
T ss_dssp TEEEEECCCSHHHHHHHHHHHHHS----CSCSCEEEEECCBTTS-CH--HHHHHHHHTT--CSEEE-ECCCCSSSBCCHH
T ss_pred CeEEEECCCCHHHHHHHHHHHHHh----CCCCCEEEEEeccCCC-CH--HHHHHHHHhh--CCEEE-EECCCCCCCCCHH
Confidence 556666555444466666554431 1236889999985544 54 4444444432 22233 22222110 0
Q ss_pred ---------cchhhhHHHhHHHHHHhhcCCcEEEEeCCCchhHHHHHHHHHH
Q 014169 356 ---------EYVQHKMMDKAAQLWSLLSKEGYLYVCGDAKGMARDVHRTLHT 398 (429)
Q Consensus 356 ---------~yvq~~l~~~~~~l~~~l~~~~~vyvCGp~~~M~~~v~~~L~~ 398 (429)
.++.+ +.+-.+.+.+...++..|++||+ -.|+..+.+.|..
T Consensus 367 ~l~~~~~~~~~~~~-~~~ai~~a~~~~~~~d~vLv~GS-~~~~~~~~~~l~~ 416 (422)
T 1w78_A 367 QLLEHLGNGKSFDS-VAQAWDAAMADAKAEDTVLVCGS-FHTVAHVMEVIDA 416 (422)
T ss_dssp HHHHHHSSCEECSS-HHHHHHHHHHHCCTTCEEEEESS-HHHHHHHHHHHHH
T ss_pred HHHHHHhhcccCCC-HHHHHHHHHHhcCCCCEEEEEee-HHHHHHHHHHHHh
Confidence 01111 11111222233356789999999 7888888776654
No 59
>4dka_C RNA-editing complex protein MP81; krepa1, VHH, single domain antibody, protein binding, RNA BI protein-immune system complex; 1.97A {Trypanosoma brucei} PDB: 4dk3_C 4dk6_C
Probab=21.99 E-value=2e+02 Score=22.42 Aligned_cols=55 Identities=13% Similarity=0.061 Sum_probs=28.0
Q ss_pred CCeeEEEEEEEEccCCCCCcccCccc--HHhhh-cCCCCCCCCccEEEEEEeCCCc-cCCCCC----CCCEEEEccCccc
Q 014169 219 PDRVHVTCALVYGPTPTGRIHKGVCS--TWMKN-AIPLEGNGDCSWAPIFIRPSNF-KLPANP----SVPIIMVGPGTGL 290 (429)
Q Consensus 219 ~~~i~l~v~~v~~~~~~g~~~~G~~S--~~L~~-l~~G~~~~~~~~v~v~~p~g~F-~lp~~~----~~pii~Ia~GtGI 290 (429)
+++-.++|++. |.-. ..|.+ ++.|. .+.+.|..--. .++... .-|+|-+.+|+|-
T Consensus 38 ~eke~~tVRC~-----------Gd~~~~~~lk~~lk~g~------~v~V~GrLRm~p~~d~~~kkyy~yP~IqV~pp~G~ 100 (105)
T 4dka_C 38 GEKEFIVIRCM-----------GDNFPASLLKDQVKLGS------RVLVQGTLRMNRHVDDVSKRLHAYPFIQVVPPLGY 100 (105)
T ss_dssp -CCEEEEEEEE-----------CC---------CCCTTC------EEEEEEEEECCCEECTTTCSEECCCEEEEC--CCE
T ss_pred CcccEEEEEEc-----------CccchHHHHHHHHhCCC------EEEEEeEEEeeeccccccceeccCCEEEEECCCcE
Confidence 44556777765 4333 44655 88887 88887754211 111112 2499999999994
No 60
>1p32_A Mitochondrial matrix protein, SF2P32; 2.25A {Homo sapiens} SCOP: d.25.1.1 PDB: 3rpx_A
Probab=21.61 E-value=45 Score=29.52 Aligned_cols=40 Identities=18% Similarity=0.115 Sum_probs=35.9
Q ss_pred ccHHHHHhhhcccCCCCCHHHHHHHHHhCCCHHHHHHHHhc
Q 014169 119 CTLRTALARYADILNPPRKAALIALAAHATEPSEAERLKFL 159 (429)
Q Consensus 119 ~tl~~~l~~~~Dl~~~p~~~~l~~la~~~~~~~~k~~L~~l 159 (429)
-.|.++|..||+-++ .+..|...|..|+.+.++++.+..|
T Consensus 160 e~Lq~~l~~yLeeRG-I~~~la~fl~~y~~~KE~~eYi~WL 199 (209)
T 1p32_A 160 WALYDHLMDFLADRG-VDNTFADELVELSTALEHQEYITFL 199 (209)
T ss_dssp HHHHHHHHHHHHTTT-CSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-CCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 479999999999998 8889999999999999988888777
Done!