Query 014170
Match_columns 429
No_of_seqs 144 out of 249
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 06:44:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014170.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014170hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ahq_A ERO1-like protein alpha 100.0 1E-140 3E-145 1090.7 6.5 370 49-427 27-447 (465)
2 3m31_A Endoplasmic oxidoreduct 100.0 3E-130 1E-134 989.3 15.6 347 63-427 8-367 (388)
3 3qrx_B Melittin; calcium-bindi 30.1 16 0.00055 23.3 0.8 11 389-399 1-11 (26)
4 2wfu_A Probable insulin-like p 24.1 17 0.00057 23.5 0.0 15 65-79 1-18 (26)
5 1pid_A Despentapeptide insulin 22.1 17 0.00058 23.5 -0.2 15 65-79 1-18 (26)
6 2k72_A Matrix metalloproteinas 19.8 13 0.00045 25.0 -1.2 18 103-120 4-21 (37)
7 2wfv_A Probable insulin-like p 18.7 21 0.00073 23.0 -0.3 16 64-79 3-21 (26)
8 1igl_A Insulin-like growth fac 14.4 61 0.0021 25.0 1.3 18 63-80 39-59 (67)
9 2p63_A Cell division control p 11.5 87 0.003 23.4 1.3 20 235-254 27-46 (56)
10 3s8f_B Cytochrome C oxidase su 11.4 1.2E+02 0.0041 27.1 2.5 21 17-37 16-36 (168)
No 1
>3ahq_A ERO1-like protein alpha; disulfide bond, PDI, redox, hyperactive human ERO1, oxidored; HET: FAD; 2.35A {Homo sapiens} PDB: 3ahr_A*
Probab=100.00 E-value=9.7e-141 Score=1090.70 Aligned_cols=370 Identities=41% Similarity=0.764 Sum_probs=292.8
Q ss_pred CCCCcccccCCCccccccccCcccchHhHHHhhhhhhhhhhHHhhcCCCceeEeeeCCCCCCCCCCCCCCCCCCCccccC
Q 014170 49 PADKSCHCAQEKDKYSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDCPFWPDDGMCRLRDCSVCEC 128 (429)
Q Consensus 49 ~~~~~c~c~~~~~~~~g~v~dc~c~~etId~~N~~~l~p~L~~L~~t~fFRyfKVnL~~~CPFW~dd~~C~~~~C~V~~c 128 (429)
++.+.|||+ ++|+|+||||+|+|||++|+.+|+|+|++|+++||||||||||+++||||+|++||++++|+|++|
T Consensus 27 ~~~~~c~c~-----~~g~v~Dc~c~~etId~~N~~~i~p~L~~L~~t~fFRyfkVnL~k~CPFW~d~~~C~~~~C~V~~c 101 (465)
T 3ahq_A 27 TAAQRCFCQ-----VSGYLDDCTCDVETIDRFNNYRLFPRLQKLLESDYFRYYKVNLKRPCPFWNDISQCGRRDCAVKPA 101 (465)
T ss_dssp ----CEEEE-----CSSSSCEEECCHHHHHHHHHHTTHHHHHHHHHSHHHHEEEECCCCCCSSCC---------------
T ss_pred CCCCCcccC-----CCCccccCcCCHHHHHHHHHHHHHHHHHHHhcCCceEEEEecCCCCCCCCCccCCcCCCCCeeecC
Confidence 566789999 999999999999999999997799999999999999999999999999999999999999999999
Q ss_pred CCCCCCcCCCcccccCCCCC----cchhccCCCccccccccch---hhccCCcccCCC---CCCCCCCCCCcceEeeCCC
Q 014170 129 PETEFPESFKKPFIRGLSSD----DLACQEGKPEAAVDRTLDS---QAFRGWTETDNP---WTHDDETDNAEMTYVNLQL 198 (429)
Q Consensus 129 ~e~eiP~~wr~~~~~~~~~~----~~~c~~~~~~~~vd~~l~~---~~~~~w~~~d~~---~~~~de~~~~~~~YVDL~~ 198 (429)
+|+|||++||++.. +++.. ...|++...++.||++++. ..+.+|.++|++ +|..|++++++++||||++
T Consensus 102 ~e~eiP~~wr~~~~-~~~~~~~~~~~~c~~~~~lg~vd~tls~~~~~~~~~w~~~dd~~~~fC~~dDe~~~~~~YVdLl~ 180 (465)
T 3ahq_A 102 QSDEVPDGIKSASY-KYSEEANNLIEEAEQAERLGAVDESLSEETQKAVLQWTKHDDSSDNFAEADDIQSPEAEYVDLLL 180 (465)
T ss_dssp ----------------------------CCHHHHHCCCCCCCHHHHHHHHHHHHHHHHTTCC-------CCSCEEEEGGG
T ss_pred CcccCChhhccccc-ccchhhccccccccccccccccccccchhhhhhhhccccccCcccccccccCCCCCCceEEeccc
Confidence 99999999998643 23221 1247666667889998884 578889887653 4544444668999999999
Q ss_pred CCCCCCCCCCCChhhhHHHHhhhcCCCCCC------------------------cchhhHHHHHHHHhhhhhHHHHHHHH
Q 014170 199 NPERYTGYTGPSARRIWDAIYSENCPTYPS------------------------KQLCQEERILYKLISGLHSSISIHIA 254 (429)
Q Consensus 199 NPERyTGY~G~~A~~IW~aIY~ENCf~~~~------------------------~~~C~EkrvfyRLISGLHaSIs~Hi~ 254 (429)
||||||||+|++|+|||++||+||||++.+ +++|+|||||||||||||||||||||
T Consensus 181 NPEryTGY~G~~A~rIW~aIY~ENCF~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ClEkrvFyRLISGLHaSIs~Hl~ 260 (465)
T 3ahq_A 181 NPERYTGYKGPDAWKIWNVIYEENCFKPQTIKRPLNPLASGQGTSEENTFYSWLEGLCVEKRAFYRLISGLHASINVHLS 260 (465)
T ss_dssp SCCCCCCCCHHHHHHHHHHHHTTCCBCC---------------------------CCCBCCHHHHHHHHHHHHHHHHHHH
T ss_pred CcCcccCCCCCcHHHHHHHHHHHhccCccccccccCccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999997542 68999999999999999999999999
Q ss_pred hhhcccc--ccCcCCCCHHHHHHHh------hccccchhhHHHHHHHHHHHHHHHHhhhhhhcc--CCCCccccHHHHHH
Q 014170 255 ADYLLDE--ANNLWGQNLTLMYDRV------LRYPDRVRNLYFTFLFVLRAVTKAAEYLEQAEY--ETGNPMEDLKTQSL 324 (429)
Q Consensus 255 ~~Yl~d~--~~~~w~pNl~~f~~Rv------~~~PeRl~NLYF~Y~lvLRAl~Ka~p~L~~~~f--~tg~~~eD~~t~~l 324 (429)
++|++++ .++.|+||+++|++|| |+|||||+||||+|+||||||+||+|||.++.| +|||..+|.+|+++
T Consensus 261 ~~Yl~~~~~~~~~W~pNl~~F~~R~~~~~t~G~~PeRl~NLYF~Y~lvLRAl~K~~p~l~~~~y~~~tGn~~eD~~tk~~ 340 (465)
T 3ahq_A 261 ARYLLQETWLEKKWGHNITEFQQRFDGILTEGEGPRRLKNLYFLYLIELRALSKVLPFFERPDFQLFTGNKIQDEENKML 340 (465)
T ss_dssp HTEEEEECSSCEEEECCHHHHHHHHCHHHHTTHHHHHHHHHHHHHHHHHHHHHHTHHHHHSTTCCCCCSCSSHHHHHHHH
T ss_pred HHHhccccccCCCcCCCHHHHHHHhccccccCCChHHHHhHHHHHHHHHHHHHHhhhhhhhccccccCCChhhhHHHHHH
Confidence 9999765 2789999999999997 579999999999999999999999999997666 99999999999999
Q ss_pred HHHHhccccccccCCCCCccccccCCC--CcchHHHHHHHhhhhhhhhhcCccCCccccchhhhhhHHHHHHHHhhccCC
Q 014170 325 MKQLLYNPQLQAACPLPFDEAKLWKGQ--RGPELKQKIQGQFRNISALMDCVGCEKCRLWGKLQVLGLGTALKILFSVNG 402 (429)
Q Consensus 325 v~~Ll~~~~~~~sc~~~FDE~~lF~~~--~~~~LKeefr~~FrNISrIMDCVgCeKCRLWGKlQt~GLgTALKILF~~~~ 402 (429)
|.+|++.. .+||.+|||+.||++. .+.+||+|||+|||||||||||||||||||||||||+||||||||||+.++
T Consensus 341 l~~ll~~~---~s~p~~FDE~~lF~~~~~~~~~LKeeFr~~FrNISrIMDCVgCdKCRLWGKLQt~GlgTALKILF~~~~ 417 (465)
T 3ahq_A 341 LLEILHEI---KSFPLHFDENSFFAGDKKEAHKLKEDFRLHFRNISRIMDCVGCFKCRLWGKLQTQGLGTALKILFSEKL 417 (465)
T ss_dssp HHHHHHHH---HHSCEEECTTCTTSCCTHHHHHHHHHHHHHHHHHHHHHTTCSSHHHHHHHHHHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHH---HhCCCccChHhhcCCcchhHHHHHHHHHHHHHhHhHHhcCCccchhhhhhHHHHHHHHHHHHHHhccCc
Confidence 99999853 4799999999999984 678999999999999999999999999999999999999999999998765
Q ss_pred CcC-----CCCCccccccceeeeecccccc
Q 014170 403 EEH-----LSQTVSITSNGRFETSHSNFLF 427 (429)
Q Consensus 403 ~~~-----~~~~~~L~R~EiVAL~N~~~~~ 427 (429)
.++ ....++|+|+|||||||||.||
T Consensus 418 ~~~~~~~~~~~~~~L~R~ElVALiNtf~Rl 447 (465)
T 3ahq_A 418 IANMPESGPSYEFHLTRQEIVSLFNAFGRI 447 (465)
T ss_dssp HHTCCSSSCCSSCCCCHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccHHHHHHHHHHHHHH
Confidence 321 1235799999999999999886
No 2
>3m31_A Endoplasmic oxidoreductin-1; disulfide mutant, disulfide bond, electron transport, endopl reticulum, FAD, flavoprotein, glycoprotein; HET: FAD; 1.85A {Saccharomyces cerevisiae} SCOP: a.227.1.1 PDB: 1rp4_A* 1rq1_A* 3nvj_A*
Probab=100.00 E-value=3.1e-130 Score=989.33 Aligned_cols=347 Identities=30% Similarity=0.609 Sum_probs=289.0
Q ss_pred ccccccCcccchHhHHHhhhhhhhhhhHHhhcCCCceeEeeeCCCCCCCCCC-CCCCCCCCCccccCCC-CCCCcCCCcc
Q 014170 63 YSGVVEDCCCDYETVNQLNEQVLHPSLQELVKTPFFRYFKVKLWCDCPFWPD-DGMCRLRDCSVCECPE-TEFPESFKKP 140 (429)
Q Consensus 63 ~~g~v~dc~c~~etId~~N~~~l~p~L~~L~~t~fFRyfKVnL~~~CPFW~d-d~~C~~~~C~V~~c~e-~eiP~~wr~~ 140 (429)
-+|.|. |++|+|||++|.+ |+|+|++||+|||||||||||+++||||+| +++|++++|+|++|++ ++||++||++
T Consensus 8 ~~~~~~--~~~~~~i~~~N~~-i~p~L~~L~~tdfFryfKVnL~k~CPFW~d~~~~C~~~~CaV~~cd~~~~iP~~w~~~ 84 (388)
T 3m31_A 8 SSGLVP--RGSFNELNAINEN-IRDDLSALLKSDFFKYFRLDLYKQCSFWDANDGLCLNRACSVDVVEDWDTLPEYWQPE 84 (388)
T ss_dssp ---------CHHHHHHHHHHH-HHHHHHHHTTSTTTSEEEEESCCCCSSSCCSSCCCCTTTTBCC----CTTSCGGGSHH
T ss_pred cCCCCC--CCCHHHHHHHHHH-HHHHHHHHhcCCCceeeeecCCCCCCCCCCcCCCCCCCCCeeeeCCCcccCchhhccc
Confidence 367776 5699999999998 899999999999999999999999999998 7999999999999997 9999999998
Q ss_pred cccCCCCCc--------chhccCCCccccccccchhhccCCcccCCCCCCCCCCCCCcceEeeCCCCCCCCCCCCCCChh
Q 014170 141 FIRGLSSDD--------LACQEGKPEAAVDRTLDSQAFRGWTETDNPWTHDDETDNAEMTYVNLQLNPERYTGYTGPSAR 212 (429)
Q Consensus 141 ~~~~~~~~~--------~~c~~~~~~~~vd~~l~~~~~~~w~~~d~~~~~~de~~~~~~~YVDL~~NPERyTGY~G~~A~ 212 (429)
..++++... ..|.........++.+ .+.+.++.||+.||+++++++||||++||||||||+|++|+
T Consensus 85 ~l~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~------~~~d~~~~~c~~dD~~~~~~~YVdLl~NPEryTGY~G~~a~ 158 (388)
T 3m31_A 85 ILGSFNNDTMKEADDSDDECKFLDQLAQTSKKP------VDIEDTINYCDVNDFNGKNAVLIDLTANPERFTGYGGKQAG 158 (388)
T ss_dssp HHTCCCTTTCEECCTTCGGGSBHHHHC-------------------CHHHHTTCCCTTEEEEETTTSCCCCCCBCHHHHH
T ss_pred cccCccccccccccccchhhhhhhhhccccccc------ccccCcCCeecccccCCCCceEeecccCCccccCCCCCchH
Confidence 766554321 1122100000011111 11234556776666678999999999999999999999999
Q ss_pred hhHHHHhhhcCCCCCCcchhhHHHHHHHHhhhhhHHHHHHHHhhhccccccCcCCCCHHHHHHHhhccccchhhHHHHHH
Q 014170 213 RIWDAIYSENCPTYPSKQLCQEERILYKLISGLHSSISIHIAADYLLDEANNLWGQNLTLMYDRVLRYPDRVRNLYFTFL 292 (429)
Q Consensus 213 ~IW~aIY~ENCf~~~~~~~C~EkrvfyRLISGLHaSIs~Hi~~~Yl~d~~~~~w~pNl~~f~~Rv~~~PeRl~NLYF~Y~ 292 (429)
+||++||+||||+++.+++|+|||+|||||||||||||||||++|+ ++.++.|+||+++|++|||+|||||+||||+|+
T Consensus 159 ~IW~aIY~ENCF~~~~~~~ClEkrvFyrLISGlHaSIs~Hl~~~yl-~~~~~~w~pNl~~F~~R~g~~P~Rl~NLYF~Y~ 237 (388)
T 3m31_A 159 QIWSTIYQDNCFTIGETGESLAKDAFYRLVSGFHASIGTHLSKEYL-NTKTGKWEPNLDLFMARIGNFPDRVTNMYFNYA 237 (388)
T ss_dssp HHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHSEE-CTTTCCEECCHHHHHHHTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCCcccccHHHHHHHHHhhhhHHHHHHHHHHHHh-CccCCCcCCCHHHHHHHHccchhHHHHHHHHHH
Confidence 9999999999999988999999999999999999999999999998 566789999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhccCCCCccccHHHHHHHHHHhccccccccCCCCCccccccCCCCcchHHHHHHHhhhhhhhhhc
Q 014170 293 FVLRAVTKAAEYLEQAEYETGNPMEDLKTQSLMKQLLYNPQLQAACPLPFDEAKLWKGQRGPELKQKIQGQFRNISALMD 372 (429)
Q Consensus 293 lvLRAl~Ka~p~L~~~~f~tg~~~eD~~t~~lv~~Ll~~~~~~~sc~~~FDE~~lF~~~~~~~LKeefr~~FrNISrIMD 372 (429)
+|||||+||+|||.+++|+| .+|.+|+++|.+|++. .+|.+|||+.||+++.+..||+|||+||||||||||
T Consensus 238 l~lRAl~K~~p~l~~~~~~~---~~d~d~k~~~~~l~~~-----~~~~~FDE~~lF~~~~a~~LKeefr~~FrNISrIMD 309 (388)
T 3m31_A 238 VVAKALWKIQPYLPEFSFAD---LVNKEIKNKMDNVISQ-----LDTKIFNEDLVFANDLSLTLKDEFRSRFKNVTKIMD 309 (388)
T ss_dssp HHHHHHHHHGGGCCCSCSSC---HHHHHHHHHHHHHHHT-----TCCGGGGSCTTCTTTSCHHHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHhhccCCc---cccHHHHHHHHHHHHH-----hCcCCCCHHHhcCCCchHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999998 4688889999999864 346799999999999999999999999999999999
Q ss_pred CccCCccccchhhhhhHHHHHHHHhhccCCCcCCCCC---ccccccceeeeecccccc
Q 014170 373 CVGCEKCRLWGKLQVLGLGTALKILFSVNGEEHLSQT---VSITSNGRFETSHSNFLF 427 (429)
Q Consensus 373 CVgCeKCRLWGKlQt~GLgTALKILF~~~~~~~~~~~---~~L~R~EiVAL~N~~~~~ 427 (429)
|||||||||||||||+||||||||||+.++.++.+.. .+|+|+||||||||+.++
T Consensus 310 CVgCeKCRLWGKLQt~GlgTALKILF~~~~~~~~~~~~~~~~L~R~EiVAL~Ntf~rl 367 (388)
T 3m31_A 310 CVQCDRCRLWGKIQTTGYATALKILFEINDADEFTKQHIVGKLTKYELIALLQTFGRL 367 (388)
T ss_dssp GCCSHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHTSBHHHHHHHHHHHHHH
T ss_pred ccCcchheeehhhhHHHHHHHHHHHhcCccccccccccccccccHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998765332111 279999999999999876
No 3
>3qrx_B Melittin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 1bh1_A 2mlt_A
Probab=30.06 E-value=16 Score=23.27 Aligned_cols=11 Identities=45% Similarity=0.918 Sum_probs=9.5
Q ss_pred HHHHHHHHhhc
Q 014170 389 GLGTALKILFS 399 (429)
Q Consensus 389 GLgTALKILF~ 399 (429)
|+|.|||+|-.
T Consensus 1 giGa~LKVLa~ 11 (26)
T 3qrx_B 1 GIGAVLKVLTT 11 (26)
T ss_pred CchHHHHHHHc
Confidence 78999999964
No 4
>2wfu_A Probable insulin-like peptide 5 A chain; cleavage on PAIR of basic residues, signaling protein; 1.85A {Drosophila melanogaster}
Probab=24.09 E-value=17 Score=23.50 Aligned_cols=15 Identities=47% Similarity=1.360 Sum_probs=11.1
Q ss_pred ccccCcc---cchHhHHH
Q 014170 65 GVVEDCC---CDYETVNQ 79 (429)
Q Consensus 65 g~v~dc~---c~~etId~ 79 (429)
|+||.|| |++.++.+
T Consensus 1 GIVdeCC~~~Cs~~~L~~ 18 (26)
T 2wfu_A 1 GVVDSCCRNSCSFSTLRA 18 (26)
T ss_dssp CHHHHHTSSCBCHHHHHH
T ss_pred CcchhhcCCcCCHHHHHH
Confidence 7888888 67776654
No 5
>1pid_A Despentapeptide insulin; hormone, glucose metabolism; 1.30A {Bos taurus} SCOP: g.1.1.1 PDB: 1bph_A 1aph_A 1dph_A 1cph_A 2a3g_A 2bn1_A 2ins_A 2zp6_A 4e7t_A 4e7u_A 4e7v_A 2bn3_A 2qiu_A 2r34_A 2r35_A 2r36_A 1a7f_A 1ai0_A* 1aiy_A* 1b17_A ...
Probab=22.13 E-value=17 Score=23.46 Aligned_cols=15 Identities=40% Similarity=1.183 Sum_probs=10.9
Q ss_pred ccccCcc---cchHhHHH
Q 014170 65 GVVEDCC---CDYETVNQ 79 (429)
Q Consensus 65 g~v~dc~---c~~etId~ 79 (429)
|+||.|| |++..+++
T Consensus 1 GIVdeCC~~~Cs~~~L~~ 18 (26)
T 1pid_A 1 GIVEQCCASVCSLYQLEN 18 (26)
T ss_dssp CHHHHHTTSCCCHHHHHT
T ss_pred CcchhhCCCcCCHHHHHH
Confidence 7888888 66666654
No 6
>2k72_A Matrix metalloproteinase-23; toxin, metalloprotease, MMP23, potassium channel, cleavage on PAIR of basic residues, glycoprotein, hydrolase; NMR {Synthetic}
Probab=19.81 E-value=13 Score=25.02 Aligned_cols=18 Identities=22% Similarity=0.728 Sum_probs=14.8
Q ss_pred eeCCCCCCCCCCCCCCCC
Q 014170 103 VKLWCDCPFWPDDGMCRL 120 (429)
Q Consensus 103 VnL~~~CPFW~dd~~C~~ 120 (429)
+|....|+||...|.|..
T Consensus 4 ~D~~~~C~~Wa~~G~C~~ 21 (37)
T 2k72_A 4 LDRIFVCTSWARKGFCDV 21 (37)
T ss_dssp CCCCSCHHHHHTTTTTTT
T ss_pred cCcchhhHHHHhCCccCC
Confidence 466679999999999874
No 7
>2wfv_A Probable insulin-like peptide 5 A chain; signaling protein, cleavage on PAIR of basic residues; 1.85A {Drosophila melanogaster}
Probab=18.71 E-value=21 Score=22.96 Aligned_cols=16 Identities=44% Similarity=1.271 Sum_probs=11.8
Q ss_pred cccccCcc---cchHhHHH
Q 014170 64 SGVVEDCC---CDYETVNQ 79 (429)
Q Consensus 64 ~g~v~dc~---c~~etId~ 79 (429)
.|+||.|| |++.++.+
T Consensus 3 rGIvdECC~~~Ct~~~L~~ 21 (26)
T 2wfv_A 3 RGVVDSCCRNSCSFSTLRA 21 (26)
T ss_dssp CHHHHHHTSSCBCHHHHHH
T ss_pred CcchhhhcCCcCCHHHHHH
Confidence 49999998 66666554
No 8
>1igl_A Insulin-like growth factor II; NMR {Homo sapiens} SCOP: g.1.1.1 PDB: 2l29_B 2v5p_C* 3e4z_C 3kr3_D
Probab=14.42 E-value=61 Score=24.99 Aligned_cols=18 Identities=39% Similarity=1.071 Sum_probs=14.3
Q ss_pred ccccccCcc---cchHhHHHh
Q 014170 63 YSGVVEDCC---CDYETVNQL 80 (429)
Q Consensus 63 ~~g~v~dc~---c~~etId~~ 80 (429)
-.|+||.|| |++..+.+.
T Consensus 39 ~rGIVdECC~~~Ct~~~L~~Y 59 (67)
T 1igl_A 39 SRGIVEECCFRSCDLALLETY 59 (67)
T ss_dssp CCCTTCCCCCSCCCSHHHHHH
T ss_pred cCCcHHHhcCCCCCHHHHHHH
Confidence 479999997 888877653
No 9
>2p63_A Cell division control protein 4; ubiquitination, helix bundle, SCF complex, cell cycle; 2.67A {Saccharomyces cerevisiae}
Probab=11.49 E-value=87 Score=23.44 Aligned_cols=20 Identities=15% Similarity=0.451 Sum_probs=15.2
Q ss_pred HHHHHHHhhhhhHHHHHHHH
Q 014170 235 ERILYKLISGLHSSISIHIA 254 (429)
Q Consensus 235 krvfyRLISGLHaSIs~Hi~ 254 (429)
|.+.|+|+|+||-|=-.-|+
T Consensus 27 knLiF~Lvs~m~RseLSDl~ 46 (56)
T 2p63_A 27 KNLLFRLVANMDRSELSDLG 46 (56)
T ss_dssp HHHHHHHHHHCCHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHH
Confidence 77999999999977444433
No 10
>3s8f_B Cytochrome C oxidase subunit 2; complex IV, respiratory chain, lipid cubic phase, monoolein, peroxide, electron transport, proton pump; HET: HEM HAS OLC; 1.80A {Thermus thermophilus} PDB: 1ehk_B* 2qpd_B* 3qjq_B* 3qjr_B* 3qju_B* 3qjv_B* 1xme_B* 3s8g_B* 4esl_B* 4ev3_B* 4f05_B* 4fa7_B* 4faa_B* 3qjs_B* 3bvd_B* 2qpe_B* 3qjt_B* 3s3b_B* 3s33_B* 3s39_B* ...
Probab=11.41 E-value=1.2e+02 Score=27.10 Aligned_cols=21 Identities=19% Similarity=0.311 Sum_probs=15.9
Q ss_pred CchHHHHHHHHHHHHHHHHhh
Q 014170 17 TRWSLLVGALIAILIAVALAY 37 (429)
Q Consensus 17 ~~~~~~~~~~~~~~~~~~~~~ 37 (429)
++|..+.+++|++++++.+-+
T Consensus 16 ~~w~~~~~~~~~~f~~~~~~~ 36 (168)
T 3s8f_B 16 KGWLAFSLAMLFVFIALIAYT 36 (168)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 568888888888888776554
Done!