Citrus Sinensis ID: 014171

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------43
Protein Sequence
MIKILIGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISSRNVPPSPSGHRNPRKL
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHccccccEEccccccccccccccccccEEEEEEccccHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccEEEEccccccccccccccccccccccccHHHcccccccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccccccccccccccHHHHHHHHHHccccccccccHHHHHcccccccccccccccccHHHHHHHHHHHHHcHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccEEHHHHHHHHHHHccccccHHHHHHHHHHHcccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHcccccHHHHHHHHcccccccccHHHHHHHHHcccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHcccccEEEEEcccccHHHHHHHHHHHHHHEHHHHccccHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHcccEcccccccHEEEEccccccccEEEccccEEEEccccEEEcccccHHHHcHHHHHHHcccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHccccccccccccccHHHHHHHHccccccHHHcccHHHHHcccccccccccccccEcHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHcccccccEEEHHHHHHHHHHHccccccHHHHHHHHHHHcccccccEcHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccEcHHHHHHHHcccccHHHHHHHHcccccccEcHHHHHHHHHcccccccccccccccccccccc
Coil and Loop (DISEMBL)
mikiligdtrsancLDMVnlvtpmlpptrpmeivlplRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHlhglvhrdmkpenflfksakedsslkatdfglsdfikpgkkfqDIVGSAYYvapevlkrksgpesdvwsIGVITYILLcgrrpfwdktedGIFKEVlrnkpdfrrkpwpsisnSAKDFVKKLLVKDPRARLTAAQalshpwvreggdaseipiDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRdqfdaidvdkngsiSLEEMRQALAKDLPWKLKESRVLEILQAIdcntdglvDFSEFVAATLHVHqleehdsekwhLRSQAAFEkfdidrdgfitpeelrmhtglkgsidplleeadidkdgriSLSEFRRLLRTAsissrnvppspsghrnprkl
Flexible Loop (DISEMBL)
mikiligdtrsancLDMVNLvtpmlpptrpmEIVLPLRKLRRIRLCEGGELLDrilakkdsryteKDAAVVVRQMLRVAAECHLhglvhrdmKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEvlkrksgpesdvwsiGVITYILLCGRRPFWDKTEDGIFKevlrnkpdfrrkpwpsisnsaKDFVKKLLVKDPRARLTaaqalshpwvreggdaSEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQleehdsekwHLRSQAAFEKFDIDRDGFITPEelrmhtglkgsidplleeadidkdgriSLSEFRRLLrtasissrnvppspsghrnprkl
Low Complexity Region (SEG)
MIKILIGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISSRNVPPSPSGHRNPRKL
Disordered region (IsUnstruct)
***ILIGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK********KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI**SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLL*******************************************
Disordered Region (DISOPRED)
MIKILIGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRL************************
Disordered Region (DISEMBL)
MIKILIGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTASIS*****************
Disordered Region (DISPRO)
*IKILIGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRT*********************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MIKILIGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISSRNVPPSPSGHRNPRKL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	429	2.2.26 [Sep-21-2011]
Q7XJR9	571	Calcium-dependent protein	yes	no	0.899	0.676	0.881	0.0
Q9FKW4	523	Calcium-dependent protein	no	no	0.895	0.734	0.862	0.0
Q1PE17	534	Calcium-dependent protein	no	no	0.899	0.722	0.826	0.0
Q9FMP5	528	Calcium-dependent protein	no	no	0.832	0.676	0.485	1e-103
Q3E9C0	523	Calcium-dependent protein	no	no	0.853	0.699	0.470	1e-101
Q42479	529	Calcium-dependent protein	no	no	0.836	0.678	0.485	1e-101
Q38870	646	Calcium-dependent protein	no	no	0.839	0.557	0.504	1e-100
O49717	554	Calcium-dependent protein	no	no	0.832	0.644	0.486	1e-100
P28582	532	Calcium-dependent protein	N/A	no	0.813	0.656	0.487	1e-100
P49101	513	Calcium-dependent protein	N/A	no	0.829	0.693	0.491	1e-100

>sp|Q7XJR9|CDPKG_ARATH Calcium-dependent protein kinase 16 OS=Arabidopsis thaliana GN=CPK16 PE=1 SV=1

 Score =  696 bits (1796), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/387 (88%), Positives = 362/387 (93%), Gaps = 1/387 (0%)

Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + LCEGGELLDRILA+KDSRY+E+DAAVVVRQML+VAAECHL GLVHRDMKPENFLFKS 
Sbjct: 186 MELCEGGELLDRILARKDSRYSERDAAVVVRQMLKVAAECHLRGLVHRDMKPENFLFKST 245

Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 162
           +EDS LKATDFGLSDFIKPGKKF DIVGSAYYVAPEVLKR+SGPESDVWSIGVI+YILLC
Sbjct: 246 EEDSPLKATDFGLSDFIKPGKKFHDIVGSAYYVAPEVLKRRSGPESDVWSIGVISYILLC 305

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           GRRPFWDKTEDGIFKEVL+NKPDFRRKPWP+ISNSAKDFVKKLLVKDPRARLTAAQALSH
Sbjct: 306 GRRPFWDKTEDGIFKEVLKNKPDFRRKPWPTISNSAKDFVKKLLVKDPRARLTAAQALSH 365

Query: 223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDV 282
           PWVREGGDASEIPIDISVLNNMRQFVK+SRLKQFALRALA+TLD+EELADLRDQFDAIDV
Sbjct: 366 PWVREGGDASEIPIDISVLNNMRQFVKFSRLKQFALRALATTLDEEELADLRDQFDAIDV 425

Query: 283 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 342
           DKNG ISLEEMRQALAKD PWKLK++RV EILQAID NTDG VDF EFVAA LHV+QLEE
Sbjct: 426 DKNGVISLEEMRQALAKDHPWKLKDARVAEILQAIDSNTDGFVDFGEFVAAALHVNQLEE 485

Query: 343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEF 402
           HDSEKW  RS+AAFEKFDID DGFIT EELRMHTGLKGSI+PLLEEADID DG+ISL EF
Sbjct: 486 HDSEKWQQRSRAAFEKFDIDGDGFITAEELRMHTGLKGSIEPLLEEADIDNDGKISLQEF 545

Query: 403 RRLLRTASISSRNVPPSPSGHRNPRKL 429
           RRLLRTASI SRNV  SP G+   RK+
Sbjct: 546 RRLLRTASIKSRNV-RSPPGYLISRKV 571

May play a role in signal transduction pathways that involve calcium as a second messenger.
Arabidopsis thaliana (taxid: 3702)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 1

>sp|Q9FKW4|CDPKS_ARATH Calcium-dependent protein kinase 28 OS=Arabidopsis thaliana GN=CPK28 PE=1 SV=1

 Score =  693 bits (1788), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/385 (86%), Positives = 365/385 (94%), Gaps = 1/385 (0%)

Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + LCEGGELLDRIL+KK +RY+EKDAAVVVRQML+VA ECHLHGLVHRDMKPENFLFKSA
Sbjct: 140 MELCEGGELLDRILSKKGNRYSEKDAAVVVRQMLKVAGECHLHGLVHRDMKPENFLFKSA 199

Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 162
           + DS LKATDFGLSDFIKPGK+F DIVGSAYYVAPEVLKR+SGPESDVWSIGVITYILLC
Sbjct: 200 QLDSPLKATDFGLSDFIKPGKRFHDIVGSAYYVAPEVLKRRSGPESDVWSIGVITYILLC 259

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           GRRPFWD+TEDGIFKEVLRNKPDF RKPW +IS+SAKDFVKKLLVKDPRARLTAAQALSH
Sbjct: 260 GRRPFWDRTEDGIFKEVLRNKPDFSRKPWATISDSAKDFVKKLLVKDPRARLTAAQALSH 319

Query: 223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDV 282
            WVREGG+A++IP+DISVLNN+RQFV+YSRLKQFALRALASTLD+ E++DLRDQFDAIDV
Sbjct: 320 AWVREGGNATDIPVDISVLNNLRQFVRYSRLKQFALRALASTLDEAEISDLRDQFDAIDV 379

Query: 283 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 342
           DKNG ISLEEMRQALAKDLPWKLK+SRV EIL+AID NTDGLVDF+EFVAA LHVHQLEE
Sbjct: 380 DKNGVISLEEMRQALAKDLPWKLKDSRVAEILEAIDSNTDGLVDFTEFVAAALHVHQLEE 439

Query: 343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEF 402
           HDSEKW LRS+AAFEKFD+D+DG+ITPEELRMHTGL+GSIDPLL+EADID+DG+ISL EF
Sbjct: 440 HDSEKWQLRSRAAFEKFDLDKDGYITPEELRMHTGLRGSIDPLLDEADIDRDGKISLHEF 499

Query: 403 RRLLRTASISSRNVPPSPSGHRNPR 427
           RRLLRTASISS+   PSP+GHRN R
Sbjct: 500 RRLLRTASISSQRA-PSPAGHRNLR 523

May play a role in signal transduction pathways that involve calcium as a second messenger.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q1PE17|CDPKI_ARATH Calcium-dependent protein kinase 18 OS=Arabidopsis thaliana GN=CPK18 PE=2 SV=1

 Score =  667 bits (1721), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 320/387 (82%), Positives = 358/387 (92%), Gaps = 1/387 (0%)

Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + LC+GGELLDRILAKKDSRYTEKDAAVVVRQML+VAAECHL GLVHRDMKPENFLFKS 
Sbjct: 149 MELCDGGELLDRILAKKDSRYTEKDAAVVVRQMLKVAAECHLRGLVHRDMKPENFLFKST 208

Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 162
           +E SSLKATDFGLSDFIKPG KFQDIVGSAYYVAPEVLKR+SGPESDVWSIGVITYILLC
Sbjct: 209 EEGSSLKATDFGLSDFIKPGVKFQDIVGSAYYVAPEVLKRRSGPESDVWSIGVITYILLC 268

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           GRRPFWDKT+DGIF EV+R KPDFR  PWP+ISN AKDFVKKLLVK+PRARLTAAQALSH
Sbjct: 269 GRRPFWDKTQDGIFNEVMRKKPDFREVPWPTISNGAKDFVKKLLVKEPRARLTAAQALSH 328

Query: 223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDV 282
            WV+EGG+ASE+PIDISVLNNMRQFVK+SRLKQ ALRALA T++++EL DLRDQFDAID+
Sbjct: 329 SWVKEGGEASEVPIDISVLNNMRQFVKFSRLKQIALRALAKTINEDELDDLRDQFDAIDI 388

Query: 283 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 342
           DKNGSISLEEMRQALAKD+PWKLK++RV EILQA D NTDGLVDF+EFV A LHV+QLEE
Sbjct: 389 DKNGSISLEEMRQALAKDVPWKLKDARVAEILQANDSNTDGLVDFTEFVVAALHVNQLEE 448

Query: 343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEF 402
           HDSEKW  RS+AAF+KFDID DGFITPEELR+ TGLKGSI+PLLEEAD+D+DGRIS++EF
Sbjct: 449 HDSEKWQQRSRAAFDKFDIDGDGFITPEELRLQTGLKGSIEPLLEEADVDEDGRISINEF 508

Query: 403 RRLLRTASISSRNVPPSPSGHRNPRKL 429
           RRLLR+AS+ S+NV  SP G++  +K+
Sbjct: 509 RRLLRSASLKSKNV-KSPPGYQLSQKM 534

May play a role in signal transduction pathways that involve calcium as a second messenger.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q9FMP5|CDPKH_ARATH Calcium-dependent protein kinase 17 OS=Arabidopsis thaliana GN=CPK17 PE=2 SV=1

 Score =  374 bits (960), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 182/375 (48%), Positives = 258/375 (68%), Gaps = 18/375 (4%)

Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + LC GGEL DRI+AK    Y+E+ AA ++R ++++   CH  G++HRD+KPENFL  + 
Sbjct: 151 MELCAGGELFDRIIAK--GHYSERAAASLLRTIVQIVHTCHSMGVIHRDLKPENFLLLNK 208

Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 162
            E+S LKATDFGLS F KPG+ F+DIVGSAYY+APEVLKRK GPE+D+WSIGV+ YILLC
Sbjct: 209 DENSPLKATDFGLSVFYKPGEVFKDIVGSAYYIAPEVLKRKYGPEADIWSIGVMLYILLC 268

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           G  PFW ++E+GIF  +LR   DF   PWPSIS  AKD VKK+L  DP+ RLTAAQ L+H
Sbjct: 269 GVPPFWAESENGIFNAILRGHVDFSSDPWPSISPQAKDLVKKMLNSDPKQRLTAAQVLNH 328

Query: 223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDV 282
           PW++E G+A ++P+D +V++ ++QF   +  K+ ALR +A  L +EE+  L++ F  +D 
Sbjct: 329 PWIKEDGEAPDVPLDNAVMSRLKQFKAMNNFKKVALRVIAGCLSEEEIMGLKEMFKGMDT 388

Query: 283 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 342
           D +G+I+LEE+RQ LAK    +L E  V ++++A D + +G +D+ EF+AAT+H+++L+ 
Sbjct: 389 DSSGTITLEELRQGLAKQ-GTRLSEYEVQQLMEAADADGNGTIDYGEFIAATMHINRLDR 447

Query: 343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELR-------MHTGLKGSIDPLLEEADIDKDG 395
            +    HL S  AF+ FD D  G+IT EEL        M+ G    I  ++ E D D DG
Sbjct: 448 EE----HLYS--AFQHFDKDNSGYITMEELEQALREFGMNDGR--DIKEIISEVDGDNDG 499

Query: 396 RISLSEFRRLLRTAS 410
           RI+  EF  ++R  +
Sbjct: 500 RINYDEFVAMMRKGN 514

May play a role in signal transduction pathways that involve calcium as a second messenger.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q3E9C0|CDPKY_ARATH Calcium-dependent protein kinase 34 OS=Arabidopsis thaliana GN=CPK34 PE=2 SV=1

 Score =  369 bits (948), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 183/389 (47%), Positives = 261/389 (67%), Gaps = 23/389 (5%)

Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + LC GGEL DRI+AK    Y+E+ AA ++R ++++   CH  G++HRD+KPENFL  S 
Sbjct: 146 MELCAGGELFDRIIAK--GHYSERAAASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLSK 203

Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 162
            E+S LKATDFGLS F KPG+ F+DIVGSAYY+APEVL+RK GPE+D+WSIGV+ YILLC
Sbjct: 204 DENSPLKATDFGLSVFYKPGEVFKDIVGSAYYIAPEVLRRKYGPEADIWSIGVMLYILLC 263

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           G  PFW ++E+GIF  +L  + DF   PWP IS  AKD V+K+L  DP+ RLTAAQ L+H
Sbjct: 264 GVPPFWAESENGIFNAILSGQVDFSSDPWPVISPQAKDLVRKMLNSDPKQRLTAAQVLNH 323

Query: 223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDV 282
           PW++E G+A ++P+D +V++ ++QF   +  K+ ALR +A  L +EE+  L++ F  +D 
Sbjct: 324 PWIKEDGEAPDVPLDNAVMSRLKQFKAMNNFKKVALRVIAGCLSEEEIMGLKEMFKGMDT 383

Query: 283 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 342
           D +G+I+LEE+RQ LAK    +L E  V ++++A D + +G +D+ EF+AAT+H+++L+ 
Sbjct: 384 DNSGTITLEELRQGLAKQ-GTRLSEYEVQQLMEAADADGNGTIDYGEFIAATMHINRLDR 442

Query: 343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELR-------MHTGLKGSIDPLLEEADIDKDG 395
            +    HL S  AF+ FD D  G+IT EEL        M+ G    I  ++ E D D DG
Sbjct: 443 EE----HLYS--AFQHFDKDNSGYITTEELEQALREFGMNDGR--DIKEIISEVDGDNDG 494

Query: 396 RISLSEFRRLLRTASISSRNVPPSPSGHR 424
           RI+  EF  ++R       N  P+P   R
Sbjct: 495 RINYEEFVAMMRKG-----NPDPNPKKRR 518

May play a role in signal transduction pathways that involve calcium as a second messenger.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q42479|CDPK3_ARATH Calcium-dependent protein kinase 3 OS=Arabidopsis thaliana GN=CPK3 PE=1 SV=1

 Score =  369 bits (947), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 181/373 (48%), Positives = 260/373 (69%), Gaps = 14/373 (3%)

Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + LCEGGEL DRI++K    Y+E+ AA + RQM+ V   CH  G++HRD+KPENFLF S 
Sbjct: 156 MELCEGGELFDRIISK--GLYSERAAADLCRQMVMVVHSCHSMGVMHRDLKPENFLFLSK 213

Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 162
            E+S LKATDFGLS F KPG KF+D+VGSAYYVAPEVLKR  GPE+D+WS GVI YILL 
Sbjct: 214 DENSPLKATDFGLSVFFKPGDKFKDLVGSAYYVAPEVLKRNYGPEADIWSAGVILYILLS 273

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           G  PFW + E GIF  +L+ + DF   PWP++S+ AKD V+K+L  DP+ RLTAA+ L+H
Sbjct: 274 GVPPFWGENETGIFDAILQGQLDFSADPWPALSDGAKDLVRKMLKYDPKDRLTAAEVLNH 333

Query: 223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDV 282
           PW+RE G+AS+ P+D +VL+ M+QF   ++LK+ AL+ +A  L +EE+  L++ F ++D 
Sbjct: 334 PWIREDGEASDKPLDNAVLSRMKQFRAMNKLKKMALKVIAENLSEEEIIGLKEMFKSLDT 393

Query: 283 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 342
           D NG ++LEE+R  L K L  K+ E+ + ++++A D + DG +D+ EF++AT+H++++E 
Sbjct: 394 DNNGIVTLEELRTGLPK-LGSKISEAEIRQLMEAADMDGDGSIDYLEFISATMHMNRIER 452

Query: 343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRM-----HTGLKGSIDPLLEEADIDKDGRI 397
            D    HL +  AF+ FD D  G+IT EEL +     + G   SI  ++ E D D+DG+I
Sbjct: 453 ED----HLYT--AFQFFDNDNSGYITMEELELAMKKYNMGDDKSIKEIIAEVDTDRDGKI 506

Query: 398 SLSEFRRLLRTAS 410
           +  EF  +++  +
Sbjct: 507 NYEEFVAMMKKGN 519

May play a role in signal transduction pathways that involve calcium as a second messenger. Functions in abscisic acid (ABA) regulation of guard cell S-type anion-and Ca(2+)-permeable channels and stomatal closure.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|Q38870|CDPK2_ARATH Calcium-dependent protein kinase 2 OS=Arabidopsis thaliana GN=CPK2 PE=1 SV=1

 Score =  367 bits (941), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 188/373 (50%), Positives = 249/373 (66%), Gaps = 13/373 (3%)

Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + LC GGEL DRI+ +    YTE+ AA + R ++ V   CH  G++HRD+KPENFLF S 
Sbjct: 264 MELCSGGELFDRIIQR--GHYTERKAAELARTIVGVLEACHSLGVMHRDLKPENFLFVSR 321

Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 162
           +EDS LK  DFGLS F KP + F D+VGS YYVAPEVL+++ GPESDVWS GVI YILL 
Sbjct: 322 EEDSLLKTIDFGLSMFFKPDEVFTDVVGSPYYVAPEVLRKRYGPESDVWSAGVIVYILLS 381

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           G  PFW +TE GIF++VL    DF   PWPSIS SAKD V+K+LV+DP+ RLTA Q L H
Sbjct: 382 GVPPFWAETEQGIFEQVLHGDLDFSSDPWPSISESAKDLVRKMLVRDPKRRLTAHQVLCH 441

Query: 223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDV 282
           PWV+  G A + P+D +VL+ M+QF   ++ K+ ALR +A +L +EE+A L+  F  ID 
Sbjct: 442 PWVQIDGVAPDKPLDSAVLSRMKQFSAMNKFKKMALRVIAESLSEEEIAGLKQMFKMIDA 501

Query: 283 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 342
           D +G I+ EE++  L K +   LKES +L+++QA D +  G +D+ EF+AATLH++++E 
Sbjct: 502 DNSGQITFEELKAGL-KRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIER 560

Query: 343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEE----ADIDKDGRIS 398
            D    HL   AAF  FD D  GFITP+EL+      G  D  +EE     D DKDGRI 
Sbjct: 561 ED----HLF--AAFSYFDKDESGFITPDELQQACEEFGVEDARIEEMMRDVDQDKDGRID 614

Query: 399 LSEFRRLLRTASI 411
            +EF  +++  SI
Sbjct: 615 YNEFVAMMQKGSI 627

May play a role in signal transduction pathways that involve calcium as a second messenger.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|O49717|CDPKF_ARATH Calcium-dependent protein kinase 15 OS=Arabidopsis thaliana GN=CPK15 PE=2 SV=1

 Score =  366 bits (939), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 181/372 (48%), Positives = 255/372 (68%), Gaps = 15/372 (4%)

Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + LC G EL DRI+A+    Y+EK AA V+R +L V   CH  G++HRD+KPENFL  S 
Sbjct: 180 MELCGGSELFDRIIAQ--GHYSEKAAAGVIRSVLNVVQICHFMGVIHRDLKPENFLLAST 237

Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 162
            E++ LKATDFGLS FI+ GK ++DIVGSAYYVAPEVL+R  G E D+WS G+I YILLC
Sbjct: 238 DENAMLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRSYGKEIDIWSAGIILYILLC 297

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           G  PFW +TE GIF E+++ + DF  +PWPSIS SAKD V+KLL KDP+ R++AAQAL H
Sbjct: 298 GVPPFWSETEKGIFNEIIKGEIDFDSQPWPSISESAKDLVRKLLTKDPKQRISAAQALEH 357

Query: 223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDV 282
           PW+R GG+A + PID +VL+ M+QF   ++LK+ AL+ +A +L +EE+  L+  F  +D 
Sbjct: 358 PWIR-GGEAPDKPIDSAVLSRMKQFRAMNKLKKLALKVIAESLSEEEIKGLKTMFANMDT 416

Query: 283 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 342
           DK+G+I+ EE++  LAK L  KL E+ V ++++A D + +G +D+ EF++AT+H ++ + 
Sbjct: 417 DKSGTITYEELKNGLAK-LGSKLTEAEVKQLMEAADVDGNGTIDYIEFISATMHRYRFDR 475

Query: 343 HDSEKWHLRSQAAFEKFDIDRDGFITPEEL-----RMHTGLKGSIDPLLEEADIDKDGRI 397
            +    H+    AF+ FD D  GFIT +EL         G + SI  ++ E D D DGRI
Sbjct: 476 DE----HVFK--AFQYFDKDNSGFITMDELESAMKEYGMGDEASIKEVIAEVDTDNDGRI 529

Query: 398 SLSEFRRLLRTA 409
           +  EF  ++R+ 
Sbjct: 530 NYEEFCAMMRSG 541

May play a role in signal transduction pathways that involve calcium as a second messenger.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P28582|CDPK_DAUCA Calcium-dependent protein kinase OS=Daucus carota PE=2 SV=2

 Score =  365 bits (937), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 178/365 (48%), Positives = 247/365 (67%), Gaps = 16/365 (4%)

Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + LC GGEL DRI+A+    Y+E+ AA + RQ++ V   CH  G++HRD+KPENFL  S 
Sbjct: 159 MELCAGGELFDRIIAQ--GHYSERAAATICRQIVNVVHVCHFMGVMHRDLKPENFLLSSK 216

Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 162
            +D+ LKATDFGLS FI+ GK +++IVGSAYYVAPEVL+R  G E D+WS GVI YILL 
Sbjct: 217 DKDAMLKATDFGLSVFIEEGKVYRNIVGSAYYVAPEVLRRSYGKEIDIWSAGVILYILLS 276

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           G  PFW + E GIF  +L    DF  +PWPS+SNSAKD V+K+L +DPR R+T+AQ L H
Sbjct: 277 GVPPFWAENEKGIFDAILEGVIDFESEPWPSVSNSAKDLVRKMLTQDPRRRITSAQVLDH 336

Query: 223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDV 282
           PW+REGG+AS+ PID +VL+ M+QF   ++LKQ AL+ +A +L +EE+  L+  F  +D 
Sbjct: 337 PWMREGGEASDKPIDSAVLSRMKQFRAMNKLKQLALKVIAESLSEEEIKGLKSMFANMDT 396

Query: 283 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 342
           DK+G+I+ EE++  LA+ L  KL E  V +++ A D + +G +D+ EF+ AT+H H+LE 
Sbjct: 397 DKSGTITYEELKSGLAR-LGSKLSEVEVQQLMDAADVDGNGTIDYLEFITATMHRHKLES 455

Query: 343 HDSEKWHLRSQAAFEKFDIDRDGFITPEEL-----RMHTGLKGSIDPLLEEADIDKDGRI 397
           ++ +        AF+ FD D  GFIT +EL         G + +I  ++ E D D DGRI
Sbjct: 456 YEHQ--------AFQYFDKDNSGFITKDELESAMKEYGMGDEATIKDIISEVDSDNDGRI 507

Query: 398 SLSEF 402
           +  EF
Sbjct: 508 NYDEF 512

May play a role in signal transduction pathways that involve calcium as a second messenger.

Daucus carota (taxid: 4039)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

>sp|P49101|CDPK2_MAIZE Calcium-dependent protein kinase 2 OS=Zea mays GN=CPK2 PE=2 SV=1

 Score =  365 bits (936), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 182/370 (49%), Positives = 250/370 (67%), Gaps = 14/370 (3%)

Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + LC GGEL DRI+AK    YTE+ AA + R ++ V   CH  G++HRD+KPENFL  + 
Sbjct: 143 MELCAGGELFDRIIAK--GHYTERAAATICRAVVNVVNICHFMGVMHRDLKPENFLLATM 200

Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 162
           +E++ LKATDFGLS FI+ GK ++DIVGSAYYVAPEVL+R  G E DVWS GVI YILL 
Sbjct: 201 EENAMLKATDFGLSVFIEEGKMYRDIVGSAYYVAPEVLRRSYGKEIDVWSAGVILYILLS 260

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           G  PFW + E GIF  +L  + DF  +PWPSIS SAKD V+K+L +DP+ RLT+AQ L H
Sbjct: 261 GVPPFWAEIEKGIFDAILHEEIDFESQPWPSISESAKDLVRKMLTRDPKKRLTSAQVLQH 320

Query: 223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDV 282
            W+REGG+AS+ PID +VL+ M+QF   ++LK+ AL+ +AS L++EE+  L+  F  +D 
Sbjct: 321 QWLREGGEASDKPIDSAVLSRMKQFRAMNKLKKMALKVIASNLNEEEIKGLKQMFMNMDT 380

Query: 283 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 342
           D +G+I+ EE++  LAK L  KL E+ V ++++A D + +G +D+ EF+ AT+H H+LE 
Sbjct: 381 DNSGTITYEELKAGLAK-LGSKLSEAEVKQLMEAADVDGNGSIDYVEFITATMHRHKLER 439

Query: 343 HDSEKWHLRSQAAFEKFDIDRDGFITPEEL-----RMHTGLKGSIDPLLEEADIDKDGRI 397
            +    HL    AF+ FD D  GFIT +EL         G   +I  ++ E D D DGRI
Sbjct: 440 DE----HLFK--AFQYFDKDNSGFITRDELESALIEHEMGDTSTIREIISEVDTDNDGRI 493

Query: 398 SLSEFRRLLR 407
           +  EF  ++R
Sbjct: 494 NYEEFCAMMR 503

May play a role in signal transduction pathways that involve calcium as a second messenger.

Zea mays (taxid: 4577)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	429
255561295	575	calcium-dependent protein kinase, putati	0.899	0.671	0.930	0.0
224074263	557	calcium dependent protein kinase 16 [Pop	0.899	0.692	0.914	0.0
147789502	534	hypothetical protein VITISV_019799 [Viti	0.899	0.722	0.917	0.0
225431134	558	PREDICTED: calcium-dependent protein kin	0.899	0.691	0.917	0.0
224134094	556	calcium dependent protein kinase 18 [Pop	0.899	0.694	0.912	0.0
357483761	560	Calcium-dependent protein kinase [Medica	0.890	0.682	0.908	0.0
449434158	543	PREDICTED: calcium-dependent protein kin	0.867	0.685	0.943	0.0
395863620	550	CDPK1 [Fragaria vesca]	0.899	0.701	0.894	0.0
325683724	552	calcium-dependent protein kinase [Fragar	0.899	0.699	0.896	0.0
356496639	523	PREDICTED: calcium-dependent protein kin	0.897	0.736	0.899	0.0

>gi|255561295|ref|XP_002521658.1| calcium-dependent protein kinase, putative [Ricinus communis] gi|223539049|gb|EEF40645.1| calcium-dependent protein kinase, putative [Ricinus communis]

 Score =  740 bits (1910), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 360/387 (93%), Positives = 373/387 (96%), Gaps = 1/387 (0%)

Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + LCEGGELLDRIL KKDSRYTEKDAAV+VRQML+VAAECHLHGLVHRDMKPENFLFKS 
Sbjct: 190 MELCEGGELLDRILLKKDSRYTEKDAAVIVRQMLKVAAECHLHGLVHRDMKPENFLFKST 249

Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 162
           K+DS LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR+SGPESDVWSIGVITYILLC
Sbjct: 250 KDDSPLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRRSGPESDVWSIGVITYILLC 309

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS+SAKDFVKKLLVKDPR RLTAAQALSH
Sbjct: 310 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISSSAKDFVKKLLVKDPRVRLTAAQALSH 369

Query: 223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDV 282
           PWVREGG+ASEIPIDISVLNNMRQFVKYSR KQFALRALASTLDDEEL+DLRDQFDAIDV
Sbjct: 370 PWVREGGNASEIPIDISVLNNMRQFVKYSRFKQFALRALASTLDDEELSDLRDQFDAIDV 429

Query: 283 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 342
           DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID NTDGLVDFSEFVAA LHVHQLEE
Sbjct: 430 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDSNTDGLVDFSEFVAAALHVHQLEE 489

Query: 343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEF 402
           H+SEKW  RSQAAFEKFDID+DGFIT EELRMHTGL+GSIDPLLEEADIDKDG+ISLSEF
Sbjct: 490 HNSEKWQHRSQAAFEKFDIDKDGFITSEELRMHTGLRGSIDPLLEEADIDKDGKISLSEF 549

Query: 403 RRLLRTASISSRNVPPSPSGHRNPRKL 429
           RRLLRTASISSRN  PSPSGHRN RK+
Sbjct: 550 RRLLRTASISSRNA-PSPSGHRNSRKM 575

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224074263|ref|XP_002304327.1| calcium dependent protein kinase 16 [Populus trichocarpa] gi|222841759|gb|EEE79306.1| calcium dependent protein kinase 16 [Populus trichocarpa]

 Score =  736 bits (1899), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 354/387 (91%), Positives = 375/387 (96%), Gaps = 1/387 (0%)

Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + LCEGGELLDRILAKKDSRYTEKDAAVVVRQML+VAAECHLHGLVHRDMKPENFLFKS 
Sbjct: 172 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDMKPENFLFKST 231

Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 162
           KEDS LKATDFGLSDFIKPG+KF+DIVGSAYYVAPEVLKR SGPESDVWSIGVITYILLC
Sbjct: 232 KEDSPLKATDFGLSDFIKPGRKFKDIVGSAYYVAPEVLKRNSGPESDVWSIGVITYILLC 291

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           GRRPFWDKTEDGIFKEVLRNKPDFRRKPWP+IS SAKDFV+KLLVKDPRARLTAAQALSH
Sbjct: 292 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPTISTSAKDFVQKLLVKDPRARLTAAQALSH 351

Query: 223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDV 282
           PWVREGGDASEIPIDISVL+NMRQFVKYSRLKQFALRALAST+D+EELADL+DQFDAIDV
Sbjct: 352 PWVREGGDASEIPIDISVLSNMRQFVKYSRLKQFALRALASTIDEEELADLKDQFDAIDV 411

Query: 283 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 342
           DKNG+ISLEEMRQALAKDLPWKLKES VLEI+QAID NTDGLVDF+EFVAA LHVHQLEE
Sbjct: 412 DKNGAISLEEMRQALAKDLPWKLKESLVLEIVQAIDSNTDGLVDFTEFVAAALHVHQLEE 471

Query: 343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEF 402
           H+SEKW LRSQAAFEKFDIDRDG+ITPEELRMH+GL+GS+DPLLEEADIDKDGRISLSEF
Sbjct: 472 HNSEKWQLRSQAAFEKFDIDRDGYITPEELRMHSGLRGSVDPLLEEADIDKDGRISLSEF 531

Query: 403 RRLLRTASISSRNVPPSPSGHRNPRKL 429
           RRLLRTAS+SS+NV P PSGHRN +KL
Sbjct: 532 RRLLRTASMSSQNV-PDPSGHRNSKKL 557

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147789502|emb|CAN69589.1| hypothetical protein VITISV_019799 [Vitis vinifera]

 Score =  735 bits (1897), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/387 (91%), Positives = 374/387 (96%), Gaps = 1/387 (0%)

Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + LCEGGELLDRILAKKDSRY+EKDAA VVRQML+VAAECHLHGLVHRDMKPENFLFKS 
Sbjct: 149 MELCEGGELLDRILAKKDSRYSEKDAAKVVRQMLKVAAECHLHGLVHRDMKPENFLFKST 208

Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 162
           KEDS LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL+RKSGPESDVWSIGVITYILLC
Sbjct: 209 KEDSPLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLRRKSGPESDVWSIGVITYILLC 268

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           G+RPFWDKTEDGIFKEVL+NKPDFRRKPWP+ISN AKDFVKKLLVKDPRARLTAAQALSH
Sbjct: 269 GKRPFWDKTEDGIFKEVLKNKPDFRRKPWPTISNGAKDFVKKLLVKDPRARLTAAQALSH 328

Query: 223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDV 282
           PWVREGGDASEIPIDISVL+NMR+FVKYS LKQFALRALASTLDDEELADLRDQFDAIDV
Sbjct: 329 PWVREGGDASEIPIDISVLSNMREFVKYSHLKQFALRALASTLDDEELADLRDQFDAIDV 388

Query: 283 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 342
           DKNGSISLEEMRQALAKDLPWK+KESRVLEILQAID NTDGLVDF+EFVAATLHVHQLEE
Sbjct: 389 DKNGSISLEEMRQALAKDLPWKMKESRVLEILQAIDSNTDGLVDFTEFVAATLHVHQLEE 448

Query: 343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEF 402
           HDS+KW  RSQAAF+KFD+DRDGFITPEEL++HTGL+GSIDPLLEEADIDKDGRISL+EF
Sbjct: 449 HDSDKWRQRSQAAFDKFDVDRDGFITPEELKLHTGLRGSIDPLLEEADIDKDGRISLAEF 508

Query: 403 RRLLRTASISSRNVPPSPSGHRNPRKL 429
           RRLLRTASISSR V PS SG RNPRK+
Sbjct: 509 RRLLRTASISSRQV-PSSSGFRNPRKI 534

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225431134|ref|XP_002267099.1| PREDICTED: calcium-dependent protein kinase 16 [Vitis vinifera] gi|297735013|emb|CBI17375.3| unnamed protein product [Vitis vinifera]

 Score =  734 bits (1896), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 355/387 (91%), Positives = 374/387 (96%), Gaps = 1/387 (0%)

Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + LCEGGELLDRILAKKDSRY+EKDAA VVRQML+VAAECHLHGLVHRDMKPENFLFKS 
Sbjct: 173 MELCEGGELLDRILAKKDSRYSEKDAAKVVRQMLKVAAECHLHGLVHRDMKPENFLFKST 232

Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 162
           KEDS LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL+RKSGPESDVWSIGVITYILLC
Sbjct: 233 KEDSPLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLRRKSGPESDVWSIGVITYILLC 292

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           G+RPFWDKTEDGIFKEVL+NKPDFRRKPWP+ISN AKDFVKKLLVKDPRARLTAAQALSH
Sbjct: 293 GKRPFWDKTEDGIFKEVLKNKPDFRRKPWPTISNGAKDFVKKLLVKDPRARLTAAQALSH 352

Query: 223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDV 282
           PWVREGGDASEIPIDISVL+NMR+FVKYS LKQFALRALASTLDDEELADLRDQFDAIDV
Sbjct: 353 PWVREGGDASEIPIDISVLSNMREFVKYSHLKQFALRALASTLDDEELADLRDQFDAIDV 412

Query: 283 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 342
           DKNGSISLEEMRQALAKDLPWK+KESRVLEILQAID NTDGLVDF+EFVAATLHVHQLEE
Sbjct: 413 DKNGSISLEEMRQALAKDLPWKMKESRVLEILQAIDSNTDGLVDFTEFVAATLHVHQLEE 472

Query: 343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEF 402
           HDS+KW  RSQAAF+KFD+DRDGFITPEEL++HTGL+GSIDPLLEEADIDKDGRISL+EF
Sbjct: 473 HDSDKWRQRSQAAFDKFDVDRDGFITPEELKLHTGLRGSIDPLLEEADIDKDGRISLAEF 532

Query: 403 RRLLRTASISSRNVPPSPSGHRNPRKL 429
           RRLLRTASISSR V PS SG RNPRK+
Sbjct: 533 RRLLRTASISSRQV-PSSSGFRNPRKI 558

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224134094|ref|XP_002327754.1| calcium dependent protein kinase 18 [Populus trichocarpa] gi|222836839|gb|EEE75232.1| calcium dependent protein kinase 18 [Populus trichocarpa]

 Score =  733 bits (1891), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/387 (91%), Positives = 373/387 (96%), Gaps = 1/387 (0%)

Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + LCEGGELLDRIL+KKDSRYTEKDAAVVVRQML+VAAECHLHGLVHRDMKPENFLFKS 
Sbjct: 171 MELCEGGELLDRILSKKDSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDMKPENFLFKST 230

Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 162
           K DS LKATDFGLSDFIKPG+KFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC
Sbjct: 231 KGDSPLKATDFGLSDFIKPGRKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 290

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           GRRPFWDKTEDGIFKEVL+NKPDFRRKPWP+IS SAKDFV KLLVKDPRARLTAAQALSH
Sbjct: 291 GRRPFWDKTEDGIFKEVLKNKPDFRRKPWPTISTSAKDFVNKLLVKDPRARLTAAQALSH 350

Query: 223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDV 282
           PWVREGG ASEIPIDISVL+NMRQFVKYSRLKQFALRALAST+D+EELADL+DQFDAIDV
Sbjct: 351 PWVREGGVASEIPIDISVLSNMRQFVKYSRLKQFALRALASTIDEEELADLKDQFDAIDV 410

Query: 283 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 342
           DKNG+ISLEEMRQALAKDLPWKLKESRVLEI+QAID NTDGLVDF+EFVAA LHVHQL+E
Sbjct: 411 DKNGAISLEEMRQALAKDLPWKLKESRVLEIVQAIDSNTDGLVDFTEFVAAALHVHQLQE 470

Query: 343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEF 402
           H+SEKW LRSQAAFEKFDIDRDG+ITPEELRMHTGL+GSIDPLLEEADIDKDG+ISLSEF
Sbjct: 471 HNSEKWQLRSQAAFEKFDIDRDGYITPEELRMHTGLRGSIDPLLEEADIDKDGKISLSEF 530

Query: 403 RRLLRTASISSRNVPPSPSGHRNPRKL 429
           RRLLRTAS+SSRNV PSPSGHR   K+
Sbjct: 531 RRLLRTASMSSRNV-PSPSGHRKSHKI 556

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357483761|ref|XP_003612167.1| Calcium-dependent protein kinase [Medicago truncatula] gi|60172742|gb|AAX14494.1| calcium-dependent protein kinase CDPK1444 [Medicago truncatula] gi|60265085|gb|AAX15706.1| calcium-dependent protein kinase [Medicago truncatula] gi|355513502|gb|AES95125.1| Calcium-dependent protein kinase [Medicago truncatula]

 Score =  720 bits (1858), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/382 (90%), Positives = 367/382 (96%)

Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + LCEGGELLDRIL KKDSRYTEKDAAVVVRQML+VAA+CHLHGLVHRDMKPENFLFKS 
Sbjct: 177 MELCEGGELLDRILNKKDSRYTEKDAAVVVRQMLKVAAQCHLHGLVHRDMKPENFLFKSN 236

Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 162
           KEDS+LKATDFGLSDFIKPGK+FQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC
Sbjct: 237 KEDSALKATDFGLSDFIKPGKRFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 296

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           GRRPFWDKTEDGIFKEVLRNKPDFRRKPWP+ISN+AKDFVKKLLVKDPRARLTAAQALSH
Sbjct: 297 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPTISNAAKDFVKKLLVKDPRARLTAAQALSH 356

Query: 223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDV 282
           PWVREGG+ASEIPIDISVLNNMRQFVKYSRLKQFALRALASTL++ EL+DL+DQFDAIDV
Sbjct: 357 PWVREGGEASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLNEGELSDLKDQFDAIDV 416

Query: 283 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 342
           DKNG+ISLEEMRQALAKDLPWKLKESRVLEILQAID NTDGLVDF+EFVAATLHVHQLEE
Sbjct: 417 DKNGAISLEEMRQALAKDLPWKLKESRVLEILQAIDSNTDGLVDFTEFVAATLHVHQLEE 476

Query: 343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEF 402
           HDS+KW  RSQAAFEKFDID+DG+ITPEELRMHTG++GSIDPLLEEADIDKDG+ISL EF
Sbjct: 477 HDSDKWQQRSQAAFEKFDIDKDGYITPEELRMHTGMRGSIDPLLEEADIDKDGKISLPEF 536

Query: 403 RRLLRTASISSRNVPPSPSGHR 424
           RRLLRTASI SRNV      HR
Sbjct: 537 RRLLRTASIGSRNVTSPTLRHR 558

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|449434158|ref|XP_004134863.1| PREDICTED: calcium-dependent protein kinase 28-like [Cucumis sativus] gi|449491358|ref|XP_004158870.1| PREDICTED: calcium-dependent protein kinase 28-like [Cucumis sativus]

 Score =  718 bits (1854), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/372 (94%), Positives = 362/372 (97%)

Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + LCEGGELLDRIL+KKDSRYTEKDAAVVVRQML+VAAECHLHGLVHRD+KPENFLFKSA
Sbjct: 169 MELCEGGELLDRILSKKDSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDLKPENFLFKSA 228

Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 162
           KEDS LKATDFGLSDFIKPGKKF DIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC
Sbjct: 229 KEDSHLKATDFGLSDFIKPGKKFHDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 288

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS SAKDF+KKLLVKDPRARLTAAQALSH
Sbjct: 289 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISPSAKDFIKKLLVKDPRARLTAAQALSH 348

Query: 223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDV 282
            WVREGGDASEIPIDISVL+NMRQFVKYSRLKQFALRALAST+ +EELADLRDQFDAIDV
Sbjct: 349 RWVREGGDASEIPIDISVLSNMRQFVKYSRLKQFALRALASTIGEEELADLRDQFDAIDV 408

Query: 283 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 342
           DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID NTDGLVDF+EFVAATLHVHQLEE
Sbjct: 409 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDVNTDGLVDFTEFVAATLHVHQLEE 468

Query: 343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEF 402
           HDS KW  RSQAAFEKFDID+DGFITPEELRMHTGLKGSIDPLLEEADIDKDG+ISLSEF
Sbjct: 469 HDSVKWQQRSQAAFEKFDIDKDGFITPEELRMHTGLKGSIDPLLEEADIDKDGKISLSEF 528

Query: 403 RRLLRTASISSR 414
           RRLLRTASISSR
Sbjct: 529 RRLLRTASISSR 540

Source: Cucumis sativus

Species: Cucumis sativus

Genus: Cucumis

Family: Cucurbitaceae

Order: Cucurbitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|395863620|gb|AFN80337.1| CDPK1 [Fragaria vesca]

 Score =  712 bits (1839), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/387 (89%), Positives = 369/387 (95%), Gaps = 1/387 (0%)

Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + LCEGGELLDRIL KKDSRYTEKDAAVVVRQML+VAAECHLHGLVHRDMKPENFLFKS 
Sbjct: 165 MELCEGGELLDRILEKKDSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDMKPENFLFKSK 224

Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 162
             DS LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL+RKSGPESDVWSIGVI+YILLC
Sbjct: 225 ALDSPLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLRRKSGPESDVWSIGVISYILLC 284

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           GRRPFWDKTEDGIFKEVLRNKPDFRRKPWP+ISNSAKDFVKKLLVKDPRARLTAAQALSH
Sbjct: 285 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPTISNSAKDFVKKLLVKDPRARLTAAQALSH 344

Query: 223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDV 282
           PWVREGGDAS+IPIDISVLNNMRQFV+YSRLKQFALRALASTL+ EELADL+DQFDAIDV
Sbjct: 345 PWVREGGDASDIPIDISVLNNMRQFVRYSRLKQFALRALASTLNAEELADLKDQFDAIDV 404

Query: 283 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 342
           DKNGSISLEEMRQALAKD+PWKLK+SRV+EIL+AID NTDGLVDF+EFVAATLHVHQLEE
Sbjct: 405 DKNGSISLEEMRQALAKDIPWKLKDSRVVEILEAIDSNTDGLVDFTEFVAATLHVHQLEE 464

Query: 343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEF 402
           HDSEKW   S+AAFEKFDIDRDG+ITP+ELRMHTGLKGSIDPLL+EADIDKDG+ISLSEF
Sbjct: 465 HDSEKWQQLSRAAFEKFDIDRDGYITPDELRMHTGLKGSIDPLLDEADIDKDGKISLSEF 524

Query: 403 RRLLRTASISSRNVPPSPSGHRNPRKL 429
           RRLLRTAS+S + V   PSG RN R++
Sbjct: 525 RRLLRTASMSPQKV-ADPSGQRNSRQV 550

Source: Fragaria vesca

Species: Fragaria vesca

Genus: Fragaria

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|325683724|gb|ADZ44603.1| calcium-dependent protein kinase [Fragaria x ananassa]

 Score =  712 bits (1839), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 347/387 (89%), Positives = 369/387 (95%), Gaps = 1/387 (0%)

Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + LCEGGELLDRIL KKDSRYTEKDAAVVVRQML+VAAECHLHGLVHRDMKPENFLFKS 
Sbjct: 167 MELCEGGELLDRILEKKDSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDMKPENFLFKSK 226

Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 162
             DS LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL+RKSG ESDVWSIGVITYILLC
Sbjct: 227 ALDSPLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLRRKSGRESDVWSIGVITYILLC 286

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           GRRPFWDKTEDGIFKEVLRNKPDFRRKPWP+ISNSAKDF KKLLVKDPRARLTAAQALSH
Sbjct: 287 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPTISNSAKDFAKKLLVKDPRARLTAAQALSH 346

Query: 223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDV 282
           PWVREGGDAS+IPIDISVLNNMRQFV+YSRLKQFALRALASTL+ EELADL+DQFDAIDV
Sbjct: 347 PWVREGGDASDIPIDISVLNNMRQFVRYSRLKQFALRALASTLNAEELADLKDQFDAIDV 406

Query: 283 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 342
           DKNGSISLEEMRQALAKD+PWKLK+SRV+EIL+AID NTDGLVDF+EFVAATLHVHQLEE
Sbjct: 407 DKNGSISLEEMRQALAKDIPWKLKDSRVVEILEAIDSNTDGLVDFTEFVAATLHVHQLEE 466

Query: 343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEF 402
           HDSEKW   S+AAFEKFDIDRDG+ITP+ELRMHTGLKGSIDPLL+EADIDKDG+ISLSEF
Sbjct: 467 HDSEKWQQLSRAAFEKFDIDRDGYITPDELRMHTGLKGSIDPLLDEADIDKDGKISLSEF 526

Query: 403 RRLLRTASISSRNVPPSPSGHRNPRKL 429
           RRLLRTAS+SS+ V  SPSG RN R++
Sbjct: 527 RRLLRTASMSSQKV-ASPSGQRNSRQV 552

Source: Fragaria x ananassa

Species: Fragaria x ananassa

Genus: Fragaria

Family: Rosaceae

Order: Rosales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356496639|ref|XP_003517173.1| PREDICTED: calcium-dependent protein kinase 28-like [Glycine max]

 Score =  712 bits (1837), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 348/387 (89%), Positives = 370/387 (95%), Gaps = 2/387 (0%)

Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + LCEGGELLDRILAKKDSRYTEKDAAVVVRQML+VAAECHLHGLVHRDMKPENFLFKS 
Sbjct: 139 MELCEGGELLDRILAKKDSRYTEKDAAVVVRQMLKVAAECHLHGLVHRDMKPENFLFKST 198

Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 162
           KEDS LKATDFGLSDFIKPGK+FQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC
Sbjct: 199 KEDSPLKATDFGLSDFIKPGKRFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 258

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           GRRPFWDKTEDGIFKEVLRNKPDFRRKPWP+ISN+AKDF+KKLLVKDPRAR TAAQALSH
Sbjct: 259 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPTISNAAKDFMKKLLVKDPRARYTAAQALSH 318

Query: 223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDV 282
           PWVREGG+A EIPIDISVLNNMRQFVKYSRLKQFALRALASTL++ EL+DL+DQFDAIDV
Sbjct: 319 PWVREGGEALEIPIDISVLNNMRQFVKYSRLKQFALRALASTLNEGELSDLKDQFDAIDV 378

Query: 283 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 342
           DKNGSISLEEMRQALAKD PWKLKESRVLEILQAID NTDGLVDF+EFVAATLHVHQLEE
Sbjct: 379 DKNGSISLEEMRQALAKDQPWKLKESRVLEILQAIDSNTDGLVDFTEFVAATLHVHQLEE 438

Query: 343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEF 402
           HDS+KW  RSQAAFEKFD+D+DG+ITP+ELRMHTGL+GSIDPLLEEADIDKDG+ISL EF
Sbjct: 439 HDSDKWQQRSQAAFEKFDLDKDGYITPDELRMHTGLRGSIDPLLEEADIDKDGKISLPEF 498

Query: 403 RRLLRTASISSRNVPPSPSGHRNPRKL 429
           RRLLRTAS+ SR V  SPS HR+ RK+
Sbjct: 499 RRLLRTASMGSRTV-MSPS-HRHHRKI 523

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	429
TAIR|locus:2827826	571	CPK16 "AT2G17890" [Arabidopsis	0.899	0.676	0.881	6.1e-181
TAIR|locus:2156947	523	CPK28 "calcium-dependent prote	0.895	0.734	0.862	5.5e-180
TAIR|locus:2177023	528	CPK17 "calcium-dependent prote	0.829	0.674	0.489	3.8e-94
TAIR|locus:2128409	529	CDPK6 "calcium-dependent prote	0.829	0.672	0.489	7.8e-94
TAIR|locus:2075885	646	CPK2 "calmodulin-domain protei	0.839	0.557	0.498	3.4e-93
TAIR|locus:2150225	523	CPK34 "AT5G19360" [Arabidopsis	0.857	0.703	0.470	4.3e-93
TAIR|locus:2175503	610	CPK1 "calcium dependent protei	0.834	0.586	0.495	6.3e-92
TAIR|locus:2015846	521	CPK33 "calcium-dependent prote	0.836	0.689	0.477	2.5e-90
TAIR|locus:2092399	541	CPK9 "calmodulin-domain protei	0.836	0.663	0.477	1.7e-89
TAIR|locus:2138897	531	CPK21 "calcium-dependent prote	0.834	0.674	0.474	5.9e-89

TAIR|locus:2827826 CPK16 "AT2G17890" [Arabidopsis thaliana (taxid:3702)]

 Score = 1756 (623.2 bits), Expect = 6.1e-181, P = 6.1e-181
 Identities = 341/387 (88%), Positives = 362/387 (93%)

Query:    43 IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
             + LCEGGELLDRILA+KDSRY+E+DAAVVVRQML+VAAECHL GLVHRDMKPENFLFKS 
Sbjct:   186 MELCEGGELLDRILARKDSRYSERDAAVVVRQMLKVAAECHLRGLVHRDMKPENFLFKST 245

Query:   103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 162
             +EDS LKATDFGLSDFIKPGKKF DIVGSAYYVAPEVLKR+SGPESDVWSIGVI+YILLC
Sbjct:   246 EEDSPLKATDFGLSDFIKPGKKFHDIVGSAYYVAPEVLKRRSGPESDVWSIGVISYILLC 305

Query:   163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
             GRRPFWDKTEDGIFKEVL+NKPDFRRKPWP+ISNSAKDFVKKLLVKDPRARLTAAQALSH
Sbjct:   306 GRRPFWDKTEDGIFKEVLKNKPDFRRKPWPTISNSAKDFVKKLLVKDPRARLTAAQALSH 365

Query:   223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDV 282
             PWVREGGDASEIPIDISVLNNMRQFVK+SRLKQFALRALA+TLD+EELADLRDQFDAIDV
Sbjct:   366 PWVREGGDASEIPIDISVLNNMRQFVKFSRLKQFALRALATTLDEEELADLRDQFDAIDV 425

Query:   283 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 342
             DKNG ISLEEMRQALAKD PWKLK++RV EILQAID NTDG VDF EFVAA LHV+QLEE
Sbjct:   426 DKNGVISLEEMRQALAKDHPWKLKDARVAEILQAIDSNTDGFVDFGEFVAAALHVNQLEE 485

Query:   343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEF 402
             HDSEKW  RS+AAFEKFDID DGFIT EELRMHTGLKGSI+PLLEEADID DG+ISL EF
Sbjct:   486 HDSEKWQQRSRAAFEKFDIDGDGFITAEELRMHTGLKGSIEPLLEEADIDNDGKISLQEF 545

Query:   403 RRLLRTASISSRNVPPSPSGHRNPRKL 429
             RRLLRTASI SRNV  SP G+   RK+
Sbjct:   546 RRLLRTASIKSRNVR-SPPGYLISRKV 571

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0007165 "signal transduction" evidence=IEA

GO:0009507 "chloroplast" evidence=ISM

GO:0005886 "plasma membrane" evidence=IDA

GO:0004672 "protein kinase activity" evidence=IDA

TAIR|locus:2156947 CPK28 "calcium-dependent protein kinase 28" [Arabidopsis thaliana (taxid:3702)]

 Score = 1747 (620.0 bits), Expect = 5.5e-180, P = 5.5e-180
 Identities = 332/385 (86%), Positives = 365/385 (94%)

Query:    43 IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
             + LCEGGELLDRIL+KK +RY+EKDAAVVVRQML+VA ECHLHGLVHRDMKPENFLFKSA
Sbjct:   140 MELCEGGELLDRILSKKGNRYSEKDAAVVVRQMLKVAGECHLHGLVHRDMKPENFLFKSA 199

Query:   103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 162
             + DS LKATDFGLSDFIKPGK+F DIVGSAYYVAPEVLKR+SGPESDVWSIGVITYILLC
Sbjct:   200 QLDSPLKATDFGLSDFIKPGKRFHDIVGSAYYVAPEVLKRRSGPESDVWSIGVITYILLC 259

Query:   163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
             GRRPFWD+TEDGIFKEVLRNKPDF RKPW +IS+SAKDFVKKLLVKDPRARLTAAQALSH
Sbjct:   260 GRRPFWDRTEDGIFKEVLRNKPDFSRKPWATISDSAKDFVKKLLVKDPRARLTAAQALSH 319

Query:   223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDV 282
              WVREGG+A++IP+DISVLNN+RQFV+YSRLKQFALRALASTLD+ E++DLRDQFDAIDV
Sbjct:   320 AWVREGGNATDIPVDISVLNNLRQFVRYSRLKQFALRALASTLDEAEISDLRDQFDAIDV 379

Query:   283 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 342
             DKNG ISLEEMRQALAKDLPWKLK+SRV EIL+AID NTDGLVDF+EFVAA LHVHQLEE
Sbjct:   380 DKNGVISLEEMRQALAKDLPWKLKDSRVAEILEAIDSNTDGLVDFTEFVAAALHVHQLEE 439

Query:   343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEF 402
             HDSEKW LRS+AAFEKFD+D+DG+ITPEELRMHTGL+GSIDPLL+EADID+DG+ISL EF
Sbjct:   440 HDSEKWQLRSRAAFEKFDLDKDGYITPEELRMHTGLRGSIDPLLDEADIDRDGKISLHEF 499

Query:   403 RRLLRTASISSRNVPPSPSGHRNPR 427
             RRLLRTASISS+  P SP+GHRN R
Sbjct:   500 RRLLRTASISSQRAP-SPAGHRNLR 523

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0004713 "protein tyrosine kinase activity" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0010200 "response to chitin" evidence=RCA

TAIR|locus:2177023 CPK17 "calcium-dependent protein kinase 17" [Arabidopsis thaliana (taxid:3702)]

 Score = 937 (334.9 bits), Expect = 3.8e-94, P = 3.8e-94
 Identities = 181/370 (48%), Positives = 256/370 (69%)

Query:    43 IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
             + LC GGEL DRI+AK    Y+E+ AA ++R ++++   CH  G++HRD+KPENFL  + 
Sbjct:   151 MELCAGGELFDRIIAK--GHYSERAAASLLRTIVQIVHTCHSMGVIHRDLKPENFLLLNK 208

Query:   103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 162
              E+S LKATDFGLS F KPG+ F+DIVGSAYY+APEVLKRK GPE+D+WSIGV+ YILLC
Sbjct:   209 DENSPLKATDFGLSVFYKPGEVFKDIVGSAYYIAPEVLKRKYGPEADIWSIGVMLYILLC 268

Query:   163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
             G  PFW ++E+GIF  +LR   DF   PWPSIS  AKD VKK+L  DP+ RLTAAQ L+H
Sbjct:   269 GVPPFWAESENGIFNAILRGHVDFSSDPWPSISPQAKDLVKKMLNSDPKQRLTAAQVLNH 328

Query:   223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDV 282
             PW++E G+A ++P+D +V++ ++QF   +  K+ ALR +A  L +EE+  L++ F  +D 
Sbjct:   329 PWIKEDGEAPDVPLDNAVMSRLKQFKAMNNFKKVALRVIAGCLSEEEIMGLKEMFKGMDT 388

Query:   283 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 342
             D +G+I+LEE+RQ LAK    +L E  V ++++A D + +G +D+ EF+AAT+H+++L+ 
Sbjct:   389 DSSGTITLEELRQGLAKQ-GTRLSEYEVQQLMEAADADGNGTIDYGEFIAATMHINRLDR 447

Query:   343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---HTGLKGSID--PLLEEADIDKDGRI 397
              +    HL S  AF+ FD D  G+IT EEL       G+    D   ++ E D D DGRI
Sbjct:   448 EE----HLYS--AFQHFDKDNSGYITMEELEQALREFGMNDGRDIKEIISEVDGDNDGRI 501

Query:   398 SLSEFRRLLR 407
             +  EF  ++R
Sbjct:   502 NYDEFVAMMR 511

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0080092 "regulation of pollen tube growth" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

TAIR|locus:2128409 CDPK6 "calcium-dependent protein kinase 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 934 (333.8 bits), Expect = 7.8e-94, P = 7.8e-94
 Identities = 181/370 (48%), Positives = 259/370 (70%)

Query:    43 IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
             + LCEGGEL DRI++K    Y+E+ AA + RQM+ V   CH  G++HRD+KPENFLF S 
Sbjct:   156 MELCEGGELFDRIISK--GLYSERAAADLCRQMVMVVHSCHSMGVMHRDLKPENFLFLSK 213

Query:   103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 162
              E+S LKATDFGLS F KPG KF+D+VGSAYYVAPEVLKR  GPE+D+WS GVI YILL 
Sbjct:   214 DENSPLKATDFGLSVFFKPGDKFKDLVGSAYYVAPEVLKRNYGPEADIWSAGVILYILLS 273

Query:   163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
             G  PFW + E GIF  +L+ + DF   PWP++S+ AKD V+K+L  DP+ RLTAA+ L+H
Sbjct:   274 GVPPFWGENETGIFDAILQGQLDFSADPWPALSDGAKDLVRKMLKYDPKDRLTAAEVLNH 333

Query:   223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDV 282
             PW+RE G+AS+ P+D +VL+ M+QF   ++LK+ AL+ +A  L +EE+  L++ F ++D 
Sbjct:   334 PWIREDGEASDKPLDNAVLSRMKQFRAMNKLKKMALKVIAENLSEEEIIGLKEMFKSLDT 393

Query:   283 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 342
             D NG ++LEE+R  L K L  K+ E+ + ++++A D + DG +D+ EF++AT+H++++E 
Sbjct:   394 DNNGIVTLEELRTGLPK-LGSKISEAEIRQLMEAADMDGDGSIDYLEFISATMHMNRIER 452

Query:   343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRM-----HTGLKGSIDPLLEEADIDKDGRI 397
              D    HL +  AF+ FD D  G+IT EEL +     + G   SI  ++ E D D+DG+I
Sbjct:   453 ED----HLYT--AFQFFDNDNSGYITMEELELAMKKYNMGDDKSIKEIIAEVDTDRDGKI 506

Query:   398 SLSEFRRLLR 407
             +  EF  +++
Sbjct:   507 NYEEFVAMMK 516

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0009507 "chloroplast" evidence=ISM

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005773 "vacuole" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=IMP

GO:0010119 "regulation of stomatal movement" evidence=IMP

GO:0010359 "regulation of anion channel activity" evidence=RCA;IMP

GO:0005515 "protein binding" evidence=IPI

GO:0009651 "response to salt stress" evidence=IMP

GO:0016020 "membrane" evidence=IDA

GO:0005829 "cytosol" evidence=IDA

GO:0046777 "protein autophosphorylation" evidence=IDA

GO:0006970 "response to osmotic stress" evidence=RCA

GO:0032880 "regulation of protein localization" evidence=RCA

GO:0046686 "response to cadmium ion" evidence=RCA

GO:0051049 "regulation of transport" evidence=RCA

TAIR|locus:2075885 CPK2 "calmodulin-domain protein kinase cdpk isoform 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 928 (331.7 bits), Expect = 3.4e-93, P = 3.4e-93
 Identities = 186/373 (49%), Positives = 253/373 (67%)

Query:    43 IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
             + LC GGEL DRI+ +    YTE+ AA + R ++ V   CH  G++HRD+KPENFLF S 
Sbjct:   264 MELCSGGELFDRIIQR--GHYTERKAAELARTIVGVLEACHSLGVMHRDLKPENFLFVSR 321

Query:   103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 162
             +EDS LK  DFGLS F KP + F D+VGS YYVAPEVL+++ GPESDVWS GVI YILL 
Sbjct:   322 EEDSLLKTIDFGLSMFFKPDEVFTDVVGSPYYVAPEVLRKRYGPESDVWSAGVIVYILLS 381

Query:   163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
             G  PFW +TE GIF++VL    DF   PWPSIS SAKD V+K+LV+DP+ RLTA Q L H
Sbjct:   382 GVPPFWAETEQGIFEQVLHGDLDFSSDPWPSISESAKDLVRKMLVRDPKRRLTAHQVLCH 441

Query:   223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDV 282
             PWV+  G A + P+D +VL+ M+QF   ++ K+ ALR +A +L +EE+A L+  F  ID 
Sbjct:   442 PWVQIDGVAPDKPLDSAVLSRMKQFSAMNKFKKMALRVIAESLSEEEIAGLKQMFKMIDA 501

Query:   283 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 342
             D +G I+ EE++  L K +   LKES +L+++QA D +  G +D+ EF+AATLH++++E 
Sbjct:   502 DNSGQITFEELKAGL-KRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIER 560

Query:   343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---HTGLKGS-IDPLLEEADIDKDGRIS 398
              D    HL   AAF  FD D  GFITP+EL+      G++ + I+ ++ + D DKDGRI 
Sbjct:   561 ED----HLF--AAFSYFDKDESGFITPDELQQACEEFGVEDARIEEMMRDVDQDKDGRID 614

Query:   399 LSEFRRLLRTASI 411
              +EF  +++  SI
Sbjct:   615 YNEFVAMMQKGSI 627

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;NAS

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IDA

TAIR|locus:2150225 CPK34 "AT5G19360" [Arabidopsis thaliana (taxid:3702)]

 Score = 927 (331.4 bits), Expect = 4.3e-93, P = 4.3e-93
 Identities = 182/387 (47%), Positives = 260/387 (67%)

Query:    43 IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
             + LC GGEL DRI+AK    Y+E+ AA ++R ++++   CH  G++HRD+KPENFL  S 
Sbjct:   146 MELCAGGELFDRIIAK--GHYSERAAASLLRTIVQIIHTCHSMGVIHRDLKPENFLLLSK 203

Query:   103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 162
              E+S LKATDFGLS F KPG+ F+DIVGSAYY+APEVL+RK GPE+D+WSIGV+ YILLC
Sbjct:   204 DENSPLKATDFGLSVFYKPGEVFKDIVGSAYYIAPEVLRRKYGPEADIWSIGVMLYILLC 263

Query:   163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
             G  PFW ++E+GIF  +L  + DF   PWP IS  AKD V+K+L  DP+ RLTAAQ L+H
Sbjct:   264 GVPPFWAESENGIFNAILSGQVDFSSDPWPVISPQAKDLVRKMLNSDPKQRLTAAQVLNH 323

Query:   223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDV 282
             PW++E G+A ++P+D +V++ ++QF   +  K+ ALR +A  L +EE+  L++ F  +D 
Sbjct:   324 PWIKEDGEAPDVPLDNAVMSRLKQFKAMNNFKKVALRVIAGCLSEEEIMGLKEMFKGMDT 383

Query:   283 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 342
             D +G+I+LEE+RQ LAK    +L E  V ++++A D + +G +D+ EF+AAT+H+++L+ 
Sbjct:   384 DNSGTITLEELRQGLAKQ-GTRLSEYEVQQLMEAADADGNGTIDYGEFIAATMHINRLDR 442

Query:   343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---HTGLKGSID--PLLEEADIDKDGRI 397
              +    HL S  AF+ FD D  G+IT EEL       G+    D   ++ E D D DGRI
Sbjct:   443 EE----HLYS--AFQHFDKDNSGYITTEELEQALREFGMNDGRDIKEIISEVDGDNDGRI 496

Query:   398 SLSEFRRLLRTASISSRNVPPSPSGHR 424
             +  EF  ++R       N  P+P   R
Sbjct:   497 NYEEFVAMMRKG-----NPDPNPKKRR 518

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0080092 "regulation of pollen tube growth" evidence=IMP

GO:0005737 "cytoplasm" evidence=IDA

GO:0006944 "cellular membrane fusion" evidence=RCA

GO:0004672 "protein kinase activity" evidence=IDA

TAIR|locus:2175503 CPK1 "calcium dependent protein kinase 1" [Arabidopsis thaliana (taxid:3702)]

 Score = 916 (327.5 bits), Expect = 6.3e-92, P = 6.3e-92
 Identities = 184/371 (49%), Positives = 251/371 (67%)

Query:    46 CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
             C GGEL DRI+ +    YTE+ AA + R ++ V   CH  G++HRD+KPENFLF S  ED
Sbjct:   231 CAGGELFDRIIQR--GHYTERKAAELTRTIVGVVEACHSLGVMHRDLKPENFLFVSKHED 288

Query:   106 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRR 165
             S LK  DFGLS F KP   F D+VGS YYVAPEVL+++ GPE+DVWS GVI YILL G  
Sbjct:   289 SLLKTIDFGLSMFFKPDDVFTDVVGSPYYVAPEVLRKRYGPEADVWSAGVIVYILLSGVP 348

Query:   166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
             PFW +TE GIF++VL    DF   PWPSIS SAKD V+K+LV+DP+ RLTA Q L HPWV
Sbjct:   349 PFWAETEQGIFEQVLHGDLDFSSDPWPSISESAKDLVRKMLVRDPKKRLTAHQVLCHPWV 408

Query:   226 REGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKN 285
             +  G A + P+D +VL+ M+QF   ++ K+ ALR +A +L +EE+A L++ F+ ID DK+
Sbjct:   409 QVDGVAPDKPLDSAVLSRMKQFSAMNKFKKMALRVIAESLSEEEIAGLKEMFNMIDADKS 468

Query:   286 GSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS 345
             G I+ EE++  L K +   LKES +L+++QA D +  G +D+ EF+AATLH++++E  D 
Sbjct:   469 GQITFEELKAGL-KRVGANLKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIERED- 526

Query:   346 EKWHLRSQAAFEKFDIDRDGFITPEELRM---HTGLKG-SIDPLLEEADIDKDGRISLSE 401
                HL   AAF  FD D  G+ITP+EL+      G++   I+ L+ + D D DGRI  +E
Sbjct:   527 ---HLF--AAFTYFDKDGSGYITPDELQQACEEFGVEDVRIEELMRDVDQDNDGRIDYNE 581

Query:   402 FRRLLRTASIS 412
             F  +++  SI+
Sbjct:   582 FVAMMQKGSIT 592

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA;IDA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS;IDA

GO:0009507 "chloroplast" evidence=ISM

GO:0016020 "membrane" evidence=NAS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005777 "peroxisome" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0046777 "protein autophosphorylation" evidence=IDA

TAIR|locus:2015846 CPK33 "calcium-dependent protein kinase 33" [Arabidopsis thaliana (taxid:3702)]

 Score = 901 (322.2 bits), Expect = 2.5e-90, P = 2.5e-90
 Identities = 178/373 (47%), Positives = 253/373 (67%)

Query:    43 IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
             + LC GGEL DRILAK    Y+E+ AA V RQ++ V   CH  G++HRD+KPENFL  S 
Sbjct:   151 MELCAGGELFDRILAK--GHYSERAAASVCRQIVNVVNICHFMGVMHRDLKPENFLLSSK 208

Query:   103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 162
              E + +KATDFGLS FI+ G+ ++DIVGSAYYVAPEVLKR+ G E D+WS G+I YILL 
Sbjct:   209 DEKALIKATDFGLSVFIEEGRVYKDIVGSAYYVAPEVLKRRYGKEIDIWSAGIILYILLS 268

Query:   163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
             G  PFW +TE GIF  +L  + DF  +PWPSISNSAKD V+++L +DP+ R++AA+ L H
Sbjct:   269 GVPPFWAETEKGIFDAILEGEIDFESQPWPSISNSAKDLVRRMLTQDPKRRISAAEVLKH 328

Query:   223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDV 282
             PW+REGG+AS+ PID +VL+ M+QF   ++LK+ AL+ +A  +D EE+  L+  F  ID 
Sbjct:   329 PWLREGGEASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENIDTEEIQGLKAMFANIDT 388

Query:   283 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 342
             D +G+I+ EE+++ LAK L  +L E+ V +++ A D + +G +D+ EF+ AT+H H+LE 
Sbjct:   389 DNSGTITYEELKEGLAK-LGSRLTEAEVKQLMDAADVDGNGSIDYIEFITATMHRHRLES 447

Query:   343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHT-----GLKGSIDPLLEEADIDKDGRI 397
             +++         AF+ FD D  G+IT +EL         G   +I  +L + D D DGRI
Sbjct:   448 NENV------YKAFQHFDKDGSGYITTDELEAALKEYGMGDDATIKEILSDVDADNDGRI 501

Query:   398 SLSEFRRLLRTAS 410
             +  EF  ++R+ +
Sbjct:   502 NYDEFCAMMRSGN 514

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005886 "plasma membrane" evidence=ISM;IDA

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

TAIR|locus:2092399 CPK9 "calmodulin-domain protein kinase 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 893 (319.4 bits), Expect = 1.7e-89, P = 1.7e-89
 Identities = 178/373 (47%), Positives = 250/373 (67%)

Query:    43 IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
             + LC GGEL DRI+AK    YTE+ AA V RQ++ V   CH  G++HRD+KPENFL  S 
Sbjct:   169 MELCAGGELFDRIIAK--GHYTERAAASVCRQIVNVVKICHFMGVLHRDLKPENFLLSSK 226

Query:   103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 162
              E + +KATDFGLS FI+ GK ++DIVGSAYYVAPEVL+R+ G E D+WS G+I YILL 
Sbjct:   227 DEKALIKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRRYGKEVDIWSAGIILYILLS 286

Query:   163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
             G  PFW +TE GIF  +L    DF  +PWPSIS+SAKD V+++L  DP+ R++AA  L H
Sbjct:   287 GVPPFWAETEKGIFDAILEGHIDFESQPWPSISSSAKDLVRRMLTADPKRRISAADVLQH 346

Query:   223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDV 282
             PW+REGG+AS+ PID +VL+ M+QF   ++LK+ AL+ +A  +D EE+  L+  F  ID 
Sbjct:   347 PWLREGGEASDKPIDSAVLSRMKQFRAMNKLKKLALKVIAENIDTEEIQGLKAMFANIDT 406

Query:   283 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 342
             D +G+I+ EE+++ LAK L  KL E+ V +++ A D + +G +D+ EF+ AT+H H+LE 
Sbjct:   407 DNSGTITYEELKEGLAK-LGSKLTEAEVKQLMDAADVDGNGSIDYIEFITATMHRHRLES 465

Query:   343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHT-----GLKGSIDPLLEEADIDKDGRI 397
             +++         AF+ FD D  G+IT +EL         G   +I  +L + D D DGRI
Sbjct:   466 NEN------LYKAFQHFDKDSSGYITIDELESALKEYGMGDDATIKEVLSDVDSDNDGRI 519

Query:   398 SLSEFRRLLRTAS 410
             +  EF  ++R+ +
Sbjct:   520 NYEEFCAMMRSGN 532

GO:0004672 "protein kinase activity" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0007165 "signal transduction" evidence=TAS

GO:0005886 "plasma membrane" evidence=IDA

GO:0000165 "MAPK cascade" evidence=RCA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0007154 "cell communication" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0009723 "response to ethylene stimulus" evidence=RCA

GO:0009738 "abscisic acid mediated signaling pathway" evidence=RCA

GO:0009862 "systemic acquired resistance, salicylic acid mediated signaling pathway" evidence=RCA

GO:0009867 "jasmonic acid mediated signaling pathway" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0030968 "endoplasmic reticulum unfolded protein response" evidence=RCA

GO:0031348 "negative regulation of defense response" evidence=RCA

GO:0043069 "negative regulation of programmed cell death" evidence=RCA

GO:0050832 "defense response to fungus" evidence=RCA

TAIR|locus:2138897 CPK21 "calcium-dependent protein kinase 21" [Arabidopsis thaliana (taxid:3702)]

 Score = 888 (317.7 bits), Expect = 5.9e-89, P = 5.9e-89
 Identities = 177/373 (47%), Positives = 254/373 (68%)

Query:    43 IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
             + LC GGEL DRI+A+    Y+E+ AA ++R ++ V   CH  G+VHRD+KPENFL  S 
Sbjct:   158 MELCAGGELFDRIIAQ--GHYSERAAAGIIRSIVNVVQICHFMGVVHRDLKPENFLLSSK 215

Query:   103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 162
             +E++ LKATDFGLS FI+ GK ++DIVGSAYYVAPEVL+R  G E D+WS GVI YILL 
Sbjct:   216 EENAMLKATDFGLSVFIEEGKVYRDIVGSAYYVAPEVLRRSYGKEIDIWSAGVILYILLS 275

Query:   163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
             G  PFW + E GIF EV++ + DF  +PWPSIS SAKD V+K+L KDP+ R+TAAQ L H
Sbjct:   276 GVPPFWAENEKGIFDEVIKGEIDFVSEPWPSISESAKDLVRKMLTKDPKRRITAAQVLEH 335

Query:   223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDV 282
             PW++ GG+A + PID +VL+ M+QF   ++LK+ AL+ +A +L +EE+  L+  F  ID 
Sbjct:   336 PWIK-GGEAPDKPIDSAVLSRMKQFRAMNKLKKLALKVIAESLSEEEIKGLKTMFANIDT 394

Query:   283 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 342
             DK+G+I+ EE++  L + L  +L E+ V ++++A D + +G +D+ EF++AT+H ++L+ 
Sbjct:   395 DKSGTITYEELKTGLTR-LGSRLSETEVKQLMEAADVDGNGTIDYYEFISATMHRYKLDR 453

Query:   343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHT-----GLKGSIDPLLEEADIDKDGRI 397
              +    H+    AF+ FD D  G IT +EL         G + SI  ++ E D D DGRI
Sbjct:   454 DE----HVYK--AFQHFDKDNSGHITRDELESAMKEYGMGDEASIKEVISEVDTDNDGRI 507

Query:   398 SLSEFRRLLRTAS 410
             +  EF  ++R+ S
Sbjct:   508 NFEEFCAMMRSGS 520

GO:0004672 "protein kinase activity" evidence=IEA;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004683 "calmodulin-dependent protein kinase activity" evidence=ISS

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0006468 "protein phosphorylation" evidence=IEA;ISS

GO:0016301 "kinase activity" evidence=ISS

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0005886 "plasma membrane" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0019903 "protein phosphatase binding" evidence=IPI

GO:0009506 "plasmodesma" evidence=IDA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q7XJR9	CDPKG_ARATH	2, ., 7, ., 1, 1, ., 1	0.8811	0.8997	0.6760	yes	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
4th Layer	2.7.11.1	0.991
3rd Layer	2.7.11	0.976

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	429
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	2e-62
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	8e-56
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	8e-40
cd05581	280	cd05581, STKc_PDK1, Catalytic domain of the Protei	8e-37
cd05122	253	cd05122, PKc_STE, Catalytic domain of STE family P	6e-35
cd05579	265	cd05579, STKc_MAST_like, Catalytic domain of Micro	1e-33
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	1e-31
cd06606	260	cd06606, STKc_MAPKKK, Catalytic domain of the Prot	5e-29
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	4e-28
cd06627	254	cd06627, STKc_Cdc7_like, Catalytic domain of Cell	2e-27
cd08215	258	cd08215, STKc_Nek, Catalytic domain of the Protein	1e-26
cd06648	285	cd06648, STKc_PAK_II, Catalytic domain of the Prot	1e-26
cd05611	260	cd05611, STKc_Rim15_like, Catalytic domain of fung	3e-26
cd06626	264	cd06626, STKc_MEKK4, Catalytic domain of the Prote	4e-26
cd06623	264	cd06623, PKc_MAPKK_plant_like, Catalytic domain of	3e-25
cd05580	290	cd05580, STKc_PKA, Catalytic domain of the Protein	9e-25
cd05572	262	cd05572, STKc_cGK_PKG, Catalytic domain of the Pro	1e-24
cd06611	280	cd06611, STKc_SLK_like, Catalytic domain of Ste20-	1e-24
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	2e-24
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	7e-24
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	1e-23
cd05573	350	cd05573, STKc_ROCK_NDR_like, Catalytic domain of R	1e-23
cd05578	258	cd05578, STKc_Yank1, Catalytic domain of the Prote	1e-23
cd06614	286	cd06614, STKc_PAK, Catalytic domain of the Protein	3e-23
cd06610	267	cd06610, STKc_OSR1_SPAK, Catalytic domain of the P	6e-23
cd06657	292	cd06657, STKc_PAK4, Catalytic domain of the Protei	7e-23
cd05583	288	cd05583, STKc_MSK_N, N-terminal catalytic domain o	9e-23
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	1e-22
cd05612	291	cd05612, STKc_PRKX_like, Catalytic domain of PRKX-	1e-22
cd06609	274	cd06609, STKc_MST3_like, Catalytic domain of Mamma	1e-22
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	3e-22
cd05574	316	cd05574, STKc_phototropin_like, Catalytic domain o	8e-22
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	9e-22
cd06632	258	cd06632, STKc_MEKK1_plant, Catalytic domain of the	2e-21
cd05600	333	cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fun	2e-21
cd06659	297	cd06659, STKc_PAK6, Catalytic domain of the Protei	2e-21
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	5e-21
cd06658	292	cd06658, STKc_PAK5, Catalytic domain of the Protei	9e-21
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	6e-20
cd05571	323	cd05571, STKc_PKB, Catalytic domain of the Protein	7e-20
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	1e-19
cd06647	293	cd06647, STKc_PAK_I, Catalytic domain of the Prote	2e-19
cd06612	256	cd06612, STKc_MST1_2, Catalytic domain of the Prot	2e-19
cd06608	275	cd06608, STKc_myosinIII_like, Catalytic domain of	2e-19
cd06628	267	cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain o	4e-19
cd05570	318	cd05570, STKc_PKC, Catalytic domain of the Protein	5e-19
cd08217	265	cd08217, STKc_Nek2, Catalytic domain of the Protei	6e-19
cd05586	330	cd05586, STKc_Sck1_like, Catalytic domain of Suppr	1e-18
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	1e-18
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	2e-18
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	2e-18
cd05594	325	cd05594, STKc_PKB_alpha, Catalytic domain of the P	2e-18
cd05584	323	cd05584, STKc_p70S6K, Catalytic domain of the Prot	2e-18
cd05595	323	cd05595, STKc_PKB_beta, Catalytic domain of the Pr	3e-18
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	3e-18
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	4e-18
cd06605	265	cd06605, PKc_MAPKK, Catalytic domain of the dual-s	4e-18
cd05609	305	cd05609, STKc_MAST, Catalytic domain of the Protei	4e-18
cd05613	290	cd05613, STKc_MSK1_N, N-terminal catalytic domain	5e-18
cd05582	318	cd05582, STKc_RSK_N, N-terminal catalytic domain o	7e-18
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	1e-17
cd05614	332	cd05614, STKc_MSK2_N, N-terminal catalytic domain	1e-17
cd08529	256	cd08529, STKc_FA2-like, Catalytic domain of the Pr	1e-17
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	2e-17
cd05593	328	cd05593, STKc_PKB_gamma, Catalytic domain of the P	2e-17
cd06621	287	cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of	3e-17
cd05601	330	cd05601, STKc_CRIK, Catalytic domain of the Protei	3e-17
PTZ00263	329	PTZ00263, PTZ00263, protein kinase A catalytic sub	5e-17
cd06637	272	cd06637, STKc_TNIK, Catalytic domain of the Protei	5e-17
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	5e-17
PTZ00184	149	PTZ00184, PTZ00184, calmodulin; Provisional	5e-17
cd05632	285	cd05632, STKc_GRK5, Catalytic domain of the Protei	5e-17
cd06644	292	cd06644, STKc_STK10_LOK, Catalytic domain of the P	6e-17
cd06656	297	cd06656, STKc_PAK3, Catalytic domain of the Protei	6e-17
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	7e-17
cd06655	296	cd06655, STKc_PAK2, Catalytic domain of the Protei	7e-17
cd05590	320	cd05590, STKc_nPKC_eta, Catalytic domain of the Pr	7e-17
cd06654	296	cd06654, STKc_PAK1, Catalytic domain of the Protei	1e-16
cd08221	256	cd08221, STKc_Nek9, Catalytic domain of the Protei	1e-16
cd06917	277	cd06917, STKc_NAK1_like, Catalytic domain of Funga	1e-16
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	2e-16
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	2e-16
cd06613	262	cd06613, STKc_MAP4K3_like, Catalytic domain of Mit	2e-16
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	2e-16
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	2e-16
cd05577	277	cd05577, STKc_GRK, Catalytic domain of the Protein	2e-16
cd06636	282	cd06636, STKc_MAP4K4_6, Catalytic domain of the Pr	2e-16
PTZ00267	478	PTZ00267, PTZ00267, NIMA-related protein kinase; P	3e-16
cd06622	286	cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of	4e-16
cd05592	316	cd05592, STKc_nPKC_theta_delta, Catalytic domain o	4e-16
cd05591	321	cd05591, STKc_nPKC_epsilon, Catalytic domain of th	6e-16
cd05630	285	cd05630, STKc_GRK6, Catalytic domain of the Protei	9e-16
cd06643	282	cd06643, STKc_SLK, Catalytic domain of the Protein	2e-15
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	2e-15
cd06618	296	cd06618, PKc_MKK7, Catalytic domain of the dual-sp	3e-15
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	3e-15
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	4e-15
cd06625	263	cd06625, STKc_MEKK3_like, Catalytic domain of MAP/	5e-15
cd08220	256	cd08220, STKc_Nek8, Catalytic domain of the Protei	6e-15
cd05619	316	cd05619, STKc_nPKC_theta, Catalytic domain of the	9e-15
cd05596	370	cd05596, STKc_ROCK, Catalytic domain of the Protei	9e-15
cd05602	325	cd05602, STKc_SGK1, Catalytic domain of the Protei	1e-14
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	2e-14
cd05575	323	cd05575, STKc_SGK, Catalytic domain of the Protein	2e-14
PTZ00283	496	PTZ00283, PTZ00283, serine/threonine protein kinas	2e-14
cd06607	307	cd06607, STKc_TAO, Catalytic domain of the Protein	2e-14
cd05624	331	cd05624, STKc_MRCK_beta, Catalytic domain of the P	2e-14
cd06653	264	cd06653, STKc_MEKK3_like_1, Catalytic domain of MA	2e-14
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	3e-14
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	3e-14
cd05618	329	cd05618, STKc_aPKC_iota, Catalytic domain of the P	4e-14
cd05631	285	cd05631, STKc_GRK4, Catalytic domain of the Protei	4e-14
cd06651	266	cd06651, STKc_MEKK3, Catalytic domain of the Prote	5e-14
cd05585	312	cd05585, STKc_YPK1_like, Catalytic domain of Yeast	6e-14
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	7e-14
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	7e-14
COG5126	160	COG5126, FRQ1, Ca2+-binding protein (EF-Hand super	7e-14
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	7e-14
cd05597	331	cd05597, STKc_DMPK_like, Catalytic domain of Myoto	7e-14
cd05623	332	cd05623, STKc_MRCK_alpha, Catalytic domain of the	7e-14
cd06652	265	cd06652, STKc_MEKK2, Catalytic domain of the Prote	1e-13
cd08219	255	cd08219, STKc_Nek3, Catalytic domain of the Protei	1e-13
cd06633	313	cd06633, STKc_TAO3, Catalytic domain of the Protei	1e-13
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	2e-13
cd05587	324	cd05587, STKc_cPKC, Catalytic domain of the Protei	2e-13
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	2e-13
cd05605	285	cd05605, STKc_GRK4_like, Catalytic domain of G pro	2e-13
cd05598	376	cd05598, STKc_LATS, Catalytic domain of the Protei	2e-13
cd06645	267	cd06645, STKc_MAP4K3, Catalytic domain of the Prot	2e-13
PHA03390	267	PHA03390, pk1, serine/threonine-protein kinase 1;	3e-13
cd06642	277	cd06642, STKc_STK25-YSK1, Catalytic domain of the	3e-13
cd06630	268	cd06630, STKc_MEKK1, Catalytic domain of the Prote	3e-13
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	3e-13
cd05607	277	cd05607, STKc_GRK7, Catalytic domain of the Protei	4e-13
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	5e-13
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	5e-13
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	6e-13
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	6e-13
cd05620	316	cd05620, STKc_nPKC_delta, Catalytic domain of the	7e-13
cd06638	286	cd06638, STKc_myosinIIIA, Catalytic domain of the	7e-13
cd05617	327	cd05617, STKc_aPKC_zeta, Catalytic domain of the P	8e-13
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	1e-12
cd08530	256	cd08530, STKc_CNK2-like, Catalytic domain of the P	1e-12
cd06620	284	cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of	2e-12
cd05589	324	cd05589, STKc_PKN, Catalytic domain of the Protein	2e-12
cd05588	329	cd05588, STKc_aPKC, Catalytic domain of the Protei	2e-12
PTZ00426	340	PTZ00426, PTZ00426, cAMP-dependent protein kinase	3e-12
PLN00034	353	PLN00034, PLN00034, mitogen-activated protein kina	3e-12
cd06635	317	cd06635, STKc_TAO1, Catalytic domain of the Protei	3e-12
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	3e-12
cd05627	360	cd05627, STKc_NDR2, Catalytic domain of the Protei	4e-12
cd05599	364	cd05599, STKc_NDR_like, Catalytic domain of Nuclea	6e-12
cd08528	269	cd08528, STKc_Nek10, Catalytic domain of the Prote	6e-12
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	6e-12
cd05628	363	cd05628, STKc_NDR1, Catalytic domain of the Protei	6e-12
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	6e-12
cd05622	371	cd05622, STKc_ROCK1, Catalytic domain of the Prote	7e-12
cd05604	325	cd05604, STKc_SGK3, Catalytic domain of the Protei	8e-12
cd05608	280	cd05608, STKc_GRK1, Catalytic domain of the Protei	9e-12
cd06639	291	cd06639, STKc_myosinIIIB, Catalytic domain of the	1e-11
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	1e-11
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	1e-11
cd05603	321	cd05603, STKc_SGK2, Catalytic domain of the Protei	2e-11
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	2e-11
cd05616	323	cd05616, STKc_cPKC_beta, Catalytic domain of the P	2e-11
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	2e-11
cd06634	308	cd06634, STKc_TAO2, Catalytic domain of the Protei	2e-11
cd08222	260	cd08222, STKc_Nek11, Catalytic domain of the Prote	3e-11
cd05615	323	cd05615, STKc_cPKC_alpha, Catalytic domain of the	3e-11
cd06617	283	cd06617, PKc_MKK3_6, Catalytic domain of the dual-	5e-11
cd06641	277	cd06641, STKc_MST3, Catalytic domain of the Protei	5e-11
cd00051	63	cd00051, EFh, EF-hand, calcium binding motif; A di	5e-11
cd06640	277	cd06640, STKc_MST4, Catalytic domain of the Protei	6e-11
PTZ00183	158	PTZ00183, PTZ00183, centrin; Provisional	8e-11
cd05621	370	cd05621, STKc_ROCK2, Catalytic domain of the Prote	8e-11
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	9e-11
cd00051	63	cd00051, EFh, EF-hand, calcium binding motif; A di	1e-10
cd06646	267	cd06646, STKc_MAP4K5, Catalytic domain of the Prot	1e-10
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	1e-10
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	2e-10
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	3e-10
cd06631	265	cd06631, STKc_YSK4, Catalytic domain of the Protei	3e-10
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	3e-10
cd06624	268	cd06624, STKc_ASK, Catalytic domain of the Protein	3e-10
smart00219	257	smart00219, TyrKc, Tyrosine kinase, catalytic doma	7e-10
smart00221	258	smart00221, STYKc, Protein kinase; unclassified sp	8e-10
cd08224	267	cd08224, STKc_Nek6_Nek7, Catalytic domain of the P	8e-10
cd08223	257	cd08223, STKc_Nek4, Catalytic domain of the Protei	1e-09
cd08225	257	cd08225, STKc_Nek5, Catalytic domain of the Protei	1e-09
cd08218	256	cd08218, STKc_Nek1, Catalytic domain of the Protei	1e-09
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	1e-09
TIGR03903	1266	TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclas	3e-09
cd06616	288	cd06616, PKc_MKK4, Catalytic domain of the dual-sp	3e-09
cd06615	308	cd06615, PKc_MEK, Catalytic domain of the dual-spe	4e-09
PRK13184	932	PRK13184, pknD, serine/threonine-protein kinase; R	6e-09
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	6e-09
cd05625	382	cd05625, STKc_LATS1, Catalytic domain of the Prote	7e-09
cd00192	262	cd00192, PTKc, Catalytic domain of Protein Tyrosin	1e-08
PHA03209	357	PHA03209, PHA03209, serine/threonine kinase US3; P	1e-08
cd05626	381	cd05626, STKc_LATS2, Catalytic domain of the Prote	1e-08
cd05065	269	cd05065, PTKc_EphR_B, Catalytic domain of the Prot	1e-08
cd05033	266	cd05033, PTKc_EphR, Catalytic domain of Ephrin Rec	2e-08
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	2e-08
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	2e-08
cd05606	278	cd05606, STKc_beta_ARK, Catalytic domain of the Pr	2e-08
cd05633	279	cd05633, STKc_GRK3, Catalytic domain of the Protei	3e-08
cd06619	279	cd06619, PKc_MKK5, Catalytic domain of the dual-sp	3e-08
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	5e-08
cd05066	267	cd05066, PTKc_EphR_A, Catalytic domain of the Prot	5e-08
cd05629	377	cd05629, STKc_NDR_like_fungal, Catalytic domain of	1e-07
cd05063	268	cd05063, PTKc_EphR_A2, Catalytic domain of the Pro	1e-07
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	2e-07
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	4e-07
pfam07714	258	pfam07714, Pkinase_Tyr, Protein tyrosine kinase	5e-07
pfam13499	60	pfam13499, EF_hand_5, EF-hand domain pair	5e-07
cd05057	279	cd05057, PTKc_EGFR_like, Catalytic domain of Epide	5e-07
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	1e-06
COG5126	160	COG5126, FRQ1, Ca2+-binding protein (EF-Hand super	3e-06
cd06649	331	cd06649, PKc_MEK2, Catalytic domain of the dual-sp	3e-06
cd05111	279	cd05111, PTK_HER3, Pseudokinase domain of the Prot	3e-06
cd05059	256	cd05059, PTKc_Tec_like, Catalytic domain of Tec-li	3e-06
cd06650	333	cd06650, PKc_MEK1, Catalytic domain of the dual-sp	5e-06
cd08228	267	cd08228, STKc_Nek6, Catalytic domain of the Protei	6e-06
cd05083	254	cd05083, PTKc_Chk, Catalytic domain of the Protein	6e-06
pfam13499	60	pfam13499, EF_hand_5, EF-hand domain pair	9e-06
cd05038	284	cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domai	1e-05
cd08229	267	cd08229, STKc_Nek7, Catalytic domain of the Protei	1e-05
cd05044	269	cd05044, PTKc_c-ros, Catalytic domain of the Prote	1e-05
cd05092	280	cd05092, PTKc_TrkA, Catalytic domain of the Protei	2e-05
cd05068	261	cd05068, PTKc_Frk_like, Catalytic domain of Fyn-re	3e-05
cd05079	284	cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) doma	4e-05
cd05112	256	cd05112, PTKc_Itk, Catalytic domain of the Protein	5e-05
cd05080	283	cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) doma	8e-05
PHA03212	391	PHA03212, PHA03212, serine/threonine kinase US3; P	9e-05
cd05113	256	cd05113, PTKc_Btk_Bmx, Catalytic domain of the Pro	9e-05
cd05082	256	cd05082, PTKc_Csk, Catalytic domain of the Protein	1e-04
cd05067	260	cd05067, PTKc_Lck_Blk, Catalytic domain of the Pro	1e-04
cd05610	669	cd05610, STKc_MASTL, Catalytic domain of the Prote	2e-04
PHA03211	461	PHA03211, PHA03211, serine/threonine kinase US3; P	2e-04
cd05108	316	cd05108, PTKc_EGFR, Catalytic domain of the Protei	2e-04
cd05032	277	cd05032, PTKc_InsR_like, Catalytic domain of Insul	2e-04
cd05110	303	cd05110, PTKc_HER4, Catalytic domain of the Protei	2e-04
pfam10591	112	pfam10591, SPARC_Ca_bdg, Secreted protein acidic a	2e-04
cd00252	116	cd00252, SPARC_EC, SPARC_EC; extracellular Ca2+ bi	2e-04
cd05109	279	cd05109, PTKc_HER2, Catalytic domain of the Protei	3e-04
pfam13833	53	pfam13833, EF_hand_6, EF-hand domain pair	3e-04
cd05039	256	cd05039, PTKc_Csk_like, Catalytic domain of C-term	4e-04
cd05048	283	cd05048, PTKc_Ror, Catalytic Domain of the Protein	4e-04
cd05093	288	cd05093, PTKc_TrkB, Catalytic domain of the Protei	4e-04
cd05081	284	cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2)	4e-04
pfam13202	25	pfam13202, EF_hand_3, EF hand	4e-04
cd05049	280	cd05049, PTKc_Trk, Catalytic domain of the Protein	5e-04
pfam13405	30	pfam13405, EF_hand_4, EF-hand domain	5e-04
cd05060	257	cd05060, PTKc_Syk_like, Catalytic domain of Spleen	8e-04
cd05101	304	cd05101, PTKc_FGFR2, Catalytic domain of the Prote	8e-04
cd05064	266	cd05064, PTKc_EphR_A10, Catalytic domain of the Pr	8e-04
cd05114	256	cd05114, PTKc_Tec_Rlk, Catalytic domain of the Pro	9e-04
cd05116	257	cd05116, PTKc_Syk, Catalytic domain of the Protein	9e-04
pfam13499	60	pfam13499, EF_hand_5, EF-hand domain pair	0.001
pfam13202	25	pfam13202, EF_hand_3, EF hand	0.001
cd05085	250	cd05085, PTKc_Fer, Catalytic domain of the Protein	0.001
cd05576	237	cd05576, STKc_RPK118_like, Catalytic domain of the	0.001
COG4248	637	COG4248, COG4248, Uncharacterized protein with pro	0.001
cd05050	288	cd05050, PTKc_Musk, Catalytic domain of the Protei	0.001
pfam00036	29	pfam00036, efhand, EF hand	0.001
cd05094	291	cd05094, PTKc_TrkC, Catalytic domain of the Protei	0.002
PLN03224	507	PLN03224, PLN03224, probable serine/threonine prot	0.002
cd05148	261	cd05148, PTKc_Srm_Brk, Catalytic domain of the Pro	0.002
smart00054	29	smart00054, EFh, EF-hand, calcium binding motif	0.002
pfam13499	60	pfam13499, EF_hand_5, EF-hand domain pair	0.003
cd05069	260	cd05069, PTKc_Yes, Catalytic domain of the Protein	0.003
cd05036	277	cd05036, PTKc_ALK_LTK, Catalytic domain of the Pro	0.003
cd05087	269	cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of t	0.003
cd05099	314	cd05099, PTKc_FGFR4, Catalytic domain of the Prote	0.003
cd00052	67	cd00052, EH, Eps15 homology domain; found in prote	0.003
cd05040	257	cd05040, PTKc_Ack_like, Catalytic domain of the Pr	0.003
cd05055	302	cd05055, PTKc_PDGFR, Catalytic domain of the Prote	0.004
TIGR02771	171	TIGR02771, TraF_Ti, conjugative transfer signal pe	0.004
PHA03207	392	PHA03207, PHA03207, serine/threonine kinase US3; P	0.004
cd05098	307	cd05098, PTKc_FGFR1, Catalytic domain of the Prote	0.004
PHA03210	501	PHA03210, PHA03210, serine/threonine kinase US3; P	0.004

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score =  201 bits (515), Expect = 2e-62
 Identities = 84/183 (45%), Positives = 109/183 (59%), Gaps = 8/183 (4%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
            CEGG+L D +  KK  R +E +A   +RQ+L      H  G+VHRD+KPEN L     E
Sbjct: 78  YCEGGDLFDLL--KKRGRLSEDEARFYLRQILSALEYLHSKGIVHRDLKPENILLD---E 132

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCG 163
           D  +K  DFGL+  + PG+K    VG+  Y+APEVL  K  G   D+WS+GVI Y LL G
Sbjct: 133 DGHVKLADFGLARQLDPGEKLTTFVGTPEYMAPEVLLGKGYGKAVDIWSLGVILYELLTG 192

Query: 164 RRPFW-DKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           + PF  D     +FK++ + KP F    W  IS  AKD ++KLLVKDP  RLTA +AL H
Sbjct: 193 KPPFPGDDQLLELFKKIGKPKPPFPPPEWD-ISPEAKDLIRKLLVKDPEKRLTAEEALQH 251

Query: 223 PWV 225
           P+ 
Sbjct: 252 PFF 254

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score =  185 bits (471), Expect = 8e-56
 Identities = 72/187 (38%), Positives = 99/187 (52%), Gaps = 11/187 (5%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
            CEGG+L D +        +E +A  +  Q+LR     H +G++HRD+KPEN L     E
Sbjct: 79  YCEGGDLFDYLSRGG--PLSEDEAKKIALQILRGLEYLHSNGIIHRDLKPENILLD---E 133

Query: 105 DSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILL 161
           +  +K  DFGL+   +K        VG+ +Y+APEVL      GP+ DVWS+GVI Y LL
Sbjct: 134 NGVVKIADFGLAKKLLKSSSSLTTFVGTPWYMAPEVLLGGNGYGPKVDVWSLGVILYELL 193

Query: 162 CGRRPFWDKTEDG---IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 218
            G+ PF  +       + + +L    +F    W S S  AKD +KK L KDP  R TA +
Sbjct: 194 TGKPPFSGENILDQLQLIRRILGPPLEFDEPKWSSGSEEAKDLIKKCLNKDPSKRPTAEE 253

Query: 219 ALSHPWV 225
            L HPW 
Sbjct: 254 ILQHPWF 260

Length = 260

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score =  142 bits (361), Expect = 8e-40
 Identities = 63/186 (33%), Positives = 100/186 (53%), Gaps = 16/186 (8%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC-HLHGLVHRDMKPENFLFKSAK 103
              GGEL   +   K+ R++E+ A     +++ +A E  H  G+++RD+KPEN L     
Sbjct: 74  YAPGGELFSHL--SKEGRFSEERARFYAAEIV-LALEYLHSLGIIYRDLKPENILLD--- 127

Query: 104 EDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILL 161
            D  +K TDFGL+ +    G +     G+  Y+APEVL  K  G   D WS+GV+ Y +L
Sbjct: 128 ADGHIKLTDFGLAKELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEML 187

Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA-- 219
            G+ PF+ +    I++++L++   F   P   +S  A+D +  LL KDP  RL +  A  
Sbjct: 188 TGKPPFYAEDRKEIYEKILKDPLRF---P-EFLSPEARDLISGLLQKDPTKRLGSGGAEE 243

Query: 220 -LSHPW 224
             +HP+
Sbjct: 244 IKAHPF 249

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

>gnl|CDD|173672 cd05581, STKc_PDK1, Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

 Score =  135 bits (342), Expect = 8e-37
 Identities = 64/206 (31%), Positives = 96/206 (46%), Gaps = 35/206 (16%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
               GELL  I  +K     EK       ++L      H  G++HRD+KPEN L     +
Sbjct: 83  YAPNGELLQYI--RKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLD---K 137

Query: 105 DSSLKATDFGLSDFIKPGKKFQDI---------------------VGSAYYVAPEVLKRK 143
           D  +K TDFG +  + P    +                       VG+A YV+PE+L  K
Sbjct: 138 DMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEK 197

Query: 144 -SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 202
            +G  SD+W++G I Y +L G+ PF    E   F+++L+ +  F     P+    AKD +
Sbjct: 198 PAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKILKLEYSFP----PNFPPDAKDLI 253

Query: 203 KKLLVKDPRARLTA----AQALSHPW 224
           +KLLV DP+ RL       +  +HP+
Sbjct: 254 EKLLVLDPQDRLGVNEGYDELKAHPF 279

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to autophosphorylate and is constitutively active in mammalian cells. PDK1 is essential for normal embryo development and is important in regulating cell volume. Length = 280

>gnl|CDD|173659 cd05122, PKc_STE, Catalytic domain of STE family Protein Kinases

 Score =  129 bits (327), Expect = 6e-35
 Identities = 67/184 (36%), Positives = 97/184 (52%), Gaps = 12/184 (6%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSA 102
            C GG L D +L   +   TE   A V +++L+     +LH  G++HRD+K  N L  S 
Sbjct: 78  FCSGGSLKD-LLKSTNQTLTESQIAYVCKELLK--GLEYLHSNGIIHRDIKAANILLTS- 133

Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYI-L 160
             D  +K  DFGLS  +   K    +VG+ Y++APEV+  K    ++D+WS+G IT I L
Sbjct: 134 --DGEVKLIDFGLSAQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLG-ITAIEL 190

Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
             G+ P+ +        ++  N P   R P    S+  KDF+KK L K+P  R TA Q L
Sbjct: 191 AEGKPPYSELPPMKALFKIATNGPPGLRNPEKW-SDEFKDFLKKCLQKNPEKRPTAEQLL 249

Query: 221 SHPW 224
            HP+
Sbjct: 250 KHPF 253

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPKK, which itself is phosphorylated and activated by a MAPKKK. Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAPKKK to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. Other STE family members include p21-activated kinases (PAKs) and class III myosins, among others. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain, which can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, as well as autophosphorylate the C-terminal motor domain. They play an important role in maintaining the structural integrity of photoreceptor cell microvilli. Length = 253

>gnl|CDD|173670 cd05579, STKc_MAST_like, Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

 Score =  126 bits (319), Expect = 1e-33
 Identities = 58/158 (36%), Positives = 80/158 (50%), Gaps = 24/158 (15%)

Query: 83  HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---------IKPGKKFQDIVGSAY 133
           H +G++HRD+KP+N L  S   +  LK TDFGLS               K+ + IVG+  
Sbjct: 110 HSNGIIHRDLKPDNILIDS---NGHLKLTDFGLSKVGLVRRQINLNDDEKEDKRIVGTPD 166

Query: 134 YVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 192
           Y+APEV+  +      D WS+G I Y  L G  PF  +T + IF+ +L  K       WP
Sbjct: 167 YIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGK-----IEWP 221

Query: 193 S---ISNSAKDFVKKLLVKDPRARLTAAQA---LSHPW 224
               +S+ A D + KLLV DP  RL A       +HP+
Sbjct: 222 EDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPF 259

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert relative to other kinases. The fungal kinases in this subfamily harbor other domains in addition to a central catalytic domain, which also contains an insert relative to MAST kinases like MASTL. Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. The fungal proteins Rim15 and cek1 are involved in the regulation of meiosis and mitosis, respectively. Length = 265

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score =  119 bits (301), Expect = 1e-31
 Identities = 58/182 (31%), Positives = 86/182 (47%), Gaps = 41/182 (22%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
            CEGG L D +L + + + +E +   ++ Q+L      H +G++HRD+KPEN L  S  +
Sbjct: 72  YCEGGSLKD-LLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDS--D 128

Query: 105 DSSLKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILL 161
           +  +K  DFGLS  +   K   + IVG+  Y+APEVL  K     +SD+WS+GVI Y L 
Sbjct: 129 NGKVKLADFGLSKLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL- 187

Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 221
                                                KD ++K+L KDP  R +A + L 
Sbjct: 188 ----------------------------------PELKDLIRKMLQKDPEKRPSAKEILE 213

Query: 222 HP 223
           H 
Sbjct: 214 HL 215

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173724 cd06606, STKc_MAPKKK, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

 Score =  113 bits (286), Expect = 5e-29
 Identities = 58/188 (30%), Positives = 93/188 (49%), Gaps = 16/188 (8%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
              GG L   +  KK  +  E       RQ+L   A  H +G+VHRD+K  N L  S   
Sbjct: 82  YVSGGSLSSLL--KKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDS--- 136

Query: 105 DSSLKATDFGLS---DFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYIL 160
           D  +K  DFG +     I+ G+    + G+ Y++APEV++  + G  +D+WS+G     +
Sbjct: 137 DGVVKLADFGCAKRLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEM 196

Query: 161 LCGRRPFWDKTEDG--IFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAA 217
             G+ P+ +       ++K     +P       P  +S  AKDF++K L +DP+ R TA 
Sbjct: 197 ATGKPPWSELGNPMAALYKIGSSGEPP----EIPEHLSEEAKDFLRKCLRRDPKKRPTAD 252

Query: 218 QALSHPWV 225
           + L HP++
Sbjct: 253 ELLQHPFL 260

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKKK5) and ASK2 (or MAPKKK6), MEKK1, MEKK2, MEKK3, MEKK4, as well as plant and fungal MAPKKKs. Also included in this subfamily are the cell division control proteins Schizosaccharomyces pombe Cdc7 and Saccharomyces cerevisiae Cdc15. Length = 260

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score =  114 bits (284), Expect = 4e-28
 Identities = 69/288 (23%), Positives = 112/288 (38%), Gaps = 24/288 (8%)

Query: 43  IRLCEGGELLDRILAKKD-SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 101
           +   +GG L D +         +E +A  ++ Q+L      H  G++HRD+KPEN L   
Sbjct: 77  MEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDR 136

Query: 102 AKEDSSLKATDFGLSDFIKPGK-------KFQDIVGSAYYVAPEVLK----RKSGPESDV 150
             +   +K  DFGL+  +                VG+  Y+APEVL       +   SD+
Sbjct: 137 --DGRVVKLIDFGLAKLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDI 194

Query: 151 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRN---------KPDFRRKPWPSISNSAKDF 201
           WS+G+  Y LL G  PF  +       + L+                     IS +A D 
Sbjct: 195 WSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSLASPLSPSNPELISKAASDL 254

Query: 202 VKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNN-MRQFVKYSRLKQFALRA 260
           +KKLL KDP+ RL+++  LSH  +           D+   ++     +      +  + +
Sbjct: 255 LKKLLAKDPKNRLSSSSDLSHDLLAHLKLKESDLSDLLKPDDSAPLRLSLPPSLEALISS 314

Query: 261 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 308
           L S         L D   + ++  NG  S      +L        + S
Sbjct: 315 LNSLAISGSDLKLDDSNFSKELAPNGVSSSPHNSSSLLLSTASSKRSS 362

Length = 384

>gnl|CDD|173731 cd06627, STKc_Cdc7_like, Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

 Score =  109 bits (275), Expect = 2e-27
 Identities = 69/186 (37%), Positives = 93/186 (50%), Gaps = 18/186 (9%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
            E G L   I  KK   + E   AV V Q+L+  A  H  G++HRD+K  N L     +D
Sbjct: 81  AENGSLRQII--KKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTT---KD 135

Query: 106 SSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKSGP--ESDVWSIGVITYI-LL 161
             +K  DFG++       K    +VG+ Y++APEV+   SG    SD+WS+G  T I LL
Sbjct: 136 GVVKLADFGVATKLNDVSKDDASVVGTPYWMAPEVI-EMSGASTASDIWSLG-CTVIELL 193

Query: 162 CGRRPFWDKTEDGI-FKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQA 219
            G  P++D       F+ V  + P     P P  IS   KDF+ +   KDP  R TA Q 
Sbjct: 194 TGNPPYYDLNPMAALFRIVQDDHP-----PLPEGISPELKDFLMQCFQKDPNLRPTAKQL 248

Query: 220 LSHPWV 225
           L HPW+
Sbjct: 249 LKHPWI 254

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Cdc7 is essential for cell division by playing a key role in the initiation of septum formation and cytokinesis. Budding yeast Cdc15 functions to coordinate mitotic exit with cytokinesis. Arabidopsis MAPKKK epsilon is required for pollen development in the plasma membrane. Length = 254

>gnl|CDD|173755 cd08215, STKc_Nek, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

 Score =  107 bits (269), Expect = 1e-26
 Identities = 56/192 (29%), Positives = 92/192 (47%), Gaps = 30/192 (15%)

Query: 46  CEGGELLDRILAKKDSR--YTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPEN-FLFK 100
            +GG+L  +I  +K     + E+       Q+    A  +LH   ++HRD+KP+N FL  
Sbjct: 81  ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQL--CLALKYLHSRKILHRDIKPQNIFLTS 138

Query: 101 SAKEDSSLKATDFGLSDFIKPGKKFQD-------IVGSAYYVAPEVLKRKS-GPESDVWS 152
               +  +K  DFG+S      K           +VG+ YY++PE+ + K    +SD+WS
Sbjct: 139 ----NGLVKLGDFGIS------KVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWS 188

Query: 153 IGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI-SNSAKDFVKKLLVKDPR 211
           +G + Y L   + PF  +    +  ++L+ +      P PS  S+  ++ V  LL KDP 
Sbjct: 189 LGCVLYELCTLKHPFEGENLLELALKILKGQY----PPIPSQYSSELRNLVSSLLQKDPE 244

Query: 212 ARLTAAQALSHP 223
            R + AQ L  P
Sbjct: 245 ERPSIAQILQSP 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Length = 258

>gnl|CDD|132979 cd06648, STKc_PAK_II, Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

 Score =  107 bits (270), Expect = 1e-26
 Identities = 59/190 (31%), Positives = 103/190 (54%), Gaps = 9/190 (4%)

Query: 47  EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 106
           EGG L D +     +R  E+  A V   +L+  +  H  G++HRD+K ++ L  S   D 
Sbjct: 99  EGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTS---DG 152

Query: 107 SLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGR 164
            +K +DFG  +   K   + + +VG+ Y++APEV+ R   G E D+WS+G++   ++ G 
Sbjct: 153 RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGE 212

Query: 165 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 224
            P++++      K +  N P   +     +S   + F+ ++LV+DP  R TAA+ L+HP+
Sbjct: 213 PPYFNEPPLQAMKRIRDNLPPKLKNL-HKVSPRLRSFLDRMLVRDPAQRATAAELLNHPF 271

Query: 225 VREGGDASEI 234
           + + G  S I
Sbjct: 272 LAKAGPPSSI 281

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs found in group I PAKs, such as an AID (autoinhibitory domain) and SH3 binding sites. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. While group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX, no such binding has been demonstrated for group II PAKs. Some known substrates of group II PAKs are also substrates of group I PAKs such as Raf, BAD, LIMK and GEFH1. Unique group II substrates include MARK/Par-1 and PDZ-RhoGEF. Group II PAKs play important roles in filopodia formation, neuron extension, cytoskeletal organization, and cell survival. Length = 285

>gnl|CDD|173702 cd05611, STKc_Rim15_like, Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

 Score =  106 bits (266), Expect = 3e-26
 Identities = 54/150 (36%), Positives = 77/150 (51%), Gaps = 12/150 (8%)

Query: 83  HLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL 140
            LH  G++HRD+KPEN L     +   LK TDFGLS      KKF   VG+  Y+APE +
Sbjct: 112 DLHQRGIIHRDIKPENLLID---QTGHLKLTDFGLSRNGLENKKF---VGTPDYLAPETI 165

Query: 141 KRKSGPE-SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 199
                 + SD WS+G + +  L G  PF  +T D +F  +L  + ++  +     S  A 
Sbjct: 166 LGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSPEAV 225

Query: 200 DFVKKLLVKDPRARLTA---AQALSHPWVR 226
           D + +LL  DP  RL A    +  SHP+ +
Sbjct: 226 DLINRLLCMDPAKRLGANGYQEIKSHPFFK 255

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a downstream effector of PKA and regulates entry into stationary phase (G0). Thus, it plays a crucial role in regulating yeast proliferation, differentiation, and aging. Cek1 may facilitate progression of mitotic anaphase. Length = 260

>gnl|CDD|132957 cd06626, STKc_MEKK4, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

 Score =  105 bits (265), Expect = 4e-26
 Identities = 61/197 (30%), Positives = 95/197 (48%), Gaps = 35/197 (17%)

Query: 44  RLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 103
            L E G +LD  + +    YT         Q+L   A  H HG+VHRD+KP N       
Sbjct: 88  ELLEHGRILDEHVIR---VYT--------LQLLEGLAYLHSHGIVHRDIKPANIFLDH-- 134

Query: 104 EDSSLKATDFGLSDFIKP-----GKKFQDIVGSAYYVAPEVLKRKS----GPESDVWSIG 154
            +  +K  DFG +  +K      G++ Q + G+  Y+APEV+        G  +D+WS+G
Sbjct: 135 -NGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLG 193

Query: 155 VITYILLCGRRPFWDKTEDG---IFKEVLRNKPDFRRKPWP---SISNSAKDFVKKLLVK 208
            +   +  G+RP W + ++    +F     +KP     P P    +S   KDF+ + L  
Sbjct: 194 CVVLEMATGKRP-WSELDNEFQIMFHVGAGHKP-----PIPDSLQLSPEGKDFLDRCLES 247

Query: 209 DPRARLTAAQALSHPWV 225
           DP+ R TA++ L HP+V
Sbjct: 248 DPKKRPTASELLQHPFV 264

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. MEKK4 also plays roles in the re-polarization of the actin cytoskeleton in response to osmotic stress, in the proper closure of the neural tube, in cardiovascular development, and in immune responses. Length = 264

>gnl|CDD|132954 cd06623, PKc_MAPKK_plant_like, Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

 Score =  103 bits (259), Expect = 3e-25
 Identities = 58/188 (30%), Positives = 96/188 (51%), Gaps = 15/188 (7%)

Query: 47  EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG---LVHRDMKPENFLFKSAK 103
           +GG L D  L KK  +  E   A + RQ+L+     +LH    ++HRD+KP N L  S  
Sbjct: 82  DGGSLAD--LLKKVGKIPEPVLAYIARQILKGLD--YLHTKRHIIHRDIKPSNLLINSKG 137

Query: 104 EDSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILL 161
           E   +K  DFG+S  ++    +    VG+  Y++PE ++ +S    +D+WS+G+      
Sbjct: 138 E---VKIADFGISKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECA 194

Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS--ISNSAKDFVKKLLVKDPRARLTAAQA 219
            G+ PF        F E+++   D      P+   S   +DF+   L KDP+ R +AA+ 
Sbjct: 195 LGKFPF-LPPGQPSFFELMQAICDGPPPSLPAEEFSPEFRDFISACLQKDPKKRPSAAEL 253

Query: 220 LSHPWVRE 227
           L HP++++
Sbjct: 254 LQHPFIKK 261

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania mexicana, is important in differentiation and virulence. Dictyostelium discoideum MEK1 is required for proper chemotaxis. MEK1 null mutants display severe defects in cell polarization and directional movement. Plants contain multiple MAPKKs like other eukaryotes. The Arabidopsis genome encodes for 10 MAPKKs while poplar and rice contain 13 MAPKKs each. The functions of these proteins have not been fully elucidated. There is evidence to suggest that MAPK cascades are involved in plant stress responses. In Arabidopsis, MKK3 plays a role in pathogen signaling, MKK2 is involved in cold and salt stress signaling, MKK4/MKK5 participates in innate immunity, and MKK7 regulates basal and systemic acquired resistance. Length = 264

>gnl|CDD|173671 cd05580, STKc_PKA, Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

 Score =  103 bits (258), Expect = 9e-25
 Identities = 63/191 (32%), Positives = 94/191 (49%), Gaps = 23/191 (12%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAK 103
             GGEL   +  +K  R+ E  A     Q++ +A E +LH   +V+RD+KPEN L  S  
Sbjct: 83  VPGGELFSHL--RKSGRFPEPVARFYAAQVV-LALE-YLHSLDIVYRDLKPENLLLDS-- 136

Query: 104 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC 162
            D  +K TDFG +  +K       + G+  Y+APE++  K  G   D W++G++ Y +L 
Sbjct: 137 -DGYIKITDFGFAKRVKGRT--YTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLA 193

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL-----TA 216
           G  PF+D     I++++L  K  F     PS  S  AKD ++ LL  D   RL       
Sbjct: 194 GYPPFFDDNPIQIYEKILEGKVRF-----PSFFSPDAKDLIRNLLQVDLTKRLGNLKNGV 248

Query: 217 AQALSHPWVRE 227
               +HPW   
Sbjct: 249 NDIKNHPWFAG 259

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubiquitously in cells and interacts with many different downstream targets. It plays a role in the regulation of diverse processes such as growth, development, memory, metabolism, gene expression, immunity, and lipolysis. Length = 290

>gnl|CDD|173663 cd05572, STKc_cGK_PKG, Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

 Score =  101 bits (255), Expect = 1e-24
 Identities = 62/191 (32%), Positives = 95/191 (49%), Gaps = 21/191 (10%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
            C GGEL   IL  +   + E  A   +  ++      H  G+++RD+KPEN L      
Sbjct: 74  YCLGGELWT-ILRDRG-LFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLL----- 126

Query: 105 DSS--LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILL 161
           DS+  +K  DFG +  +K G+K     G+  YVAPE++  K      D WS+G++ Y LL
Sbjct: 127 DSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELL 186

Query: 162 CGRRPFWDKTED--GIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQ 218
            GR PF +  ED   I+ ++L+         +P+ I  +AKD +K+LL ++P  RL   +
Sbjct: 187 TGRPPFGEDDEDPMEIYNDILKGNGKLE---FPNYIDKAAKDLIKQLLRRNPEERLGNLK 243

Query: 219 A-----LSHPW 224
                   H W
Sbjct: 244 GGIKDIKKHKW 254

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowing autophosphorylation and activation of the kinase. cGKI is a soluble protein expressed in all smooth muscles, platelets, cerebellum, and kidney. It is also expressed at lower concentrations in other tissues. cGKII is a membrane-bound protein that is most abundantly expressed in the intestine. It is also present in the brain nuclei, adrenal cortex, kidney, lung, and prostate. cGKI is involved in the regulation of smooth muscle tone, smooth cell proliferation, and platelet activation. cGKII plays a role in the regulation of secretion, such as renin secretion by the kidney and aldosterone secretion by the adrenal. It also regulates bone growth and the circadian rhythm. Length = 262

>gnl|CDD|132942 cd06611, STKc_SLK_like, Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

 Score =  102 bits (255), Expect = 1e-24
 Identities = 72/203 (35%), Positives = 104/203 (51%), Gaps = 20/203 (9%)

Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           I  C+GG L D I+ + +   TE     V RQML      H H ++HRD+K  N L    
Sbjct: 81  IEFCDGGAL-DSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTL- 138

Query: 103 KEDSSLKATDFGLSDFIKPGKKFQD-IVGSAYYVAPEVL---KRKSGP---ESDVWSIGV 155
             D  +K  DFG+S   K   + +D  +G+ Y++APEV+     K  P   ++D+WS+G 
Sbjct: 139 --DGDVKLADFGVSAKNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLG- 195

Query: 156 ITYILLCGRRPFWDKTEDG--IFKEVLRNKPDFRRKP--WPSISNSAKDFVKKLLVKDPR 211
           IT I L    P   +      + K +L+++P    +P  W   S+S  DF+K  LVKDP 
Sbjct: 196 ITLIELAQMEPPHHELNPMRVLLK-ILKSEPPTLDQPSKW---SSSFNDFLKSCLVKDPD 251

Query: 212 ARLTAAQALSHPWVREGGDASEI 234
            R TAA+ L HP+V +  D   I
Sbjct: 252 DRPTAAELLKHPFVSDQSDNKAI 274

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. SmSLK is capable of activating the MAPK Jun N-terminal kinase (JNK) pathway in human embryonic kidney (HEK) cells as well as in Xenopus oocytes. It may participate in regulating MAPK cascades during host-parasite interactions. Length = 280

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score =  101 bits (255), Expect = 2e-24
 Identities = 55/181 (30%), Positives = 85/181 (46%), Gaps = 31/181 (17%)

Query: 72  VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVG 130
           + Q+LR  A CH H ++HRD+KP+N L      D  LK  DFGL+  F  P + +   V 
Sbjct: 104 MYQLLRGLAYCHSHRILHRDLKPQNILINR---DGVLKLADFGLARAFGIPLRTYTHEVV 160

Query: 131 SAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK--EVL----- 180
           + +Y APE+L   +      D+WS+G I   ++ G+  F   +E D +FK  ++L     
Sbjct: 161 TLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTE 220

Query: 181 -------------RNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHP 223
                           P F  K      P +     D + K+L  +P  R++A +AL HP
Sbjct: 221 ESWPGVTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHP 280

Query: 224 W 224
           +
Sbjct: 281 Y 281

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score =  100 bits (250), Expect = 7e-24
 Identities = 61/180 (33%), Positives = 85/180 (47%), Gaps = 32/180 (17%)

Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH HG++HRD+KPEN L      +  LK  DFGL+  F  P + +   V + 
Sbjct: 106 QLLQGLAFCHSHGILHRDLKPENLLI---NTEGVLKLADFGLARSFGSPVRPYTHYVVTR 162

Query: 133 YYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK--EVL------- 180
           +Y APE+L          D+WS+G I   LL  R  F  K+E D +FK    L       
Sbjct: 163 WYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEV 222

Query: 181 ------------RNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 224
                        + P     P     P+ S  A D + ++L  DP  R+TA QAL+HP+
Sbjct: 223 WPKFTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPY 282

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score = 99.7 bits (249), Expect = 1e-23
 Identities = 63/204 (30%), Positives = 93/204 (45%), Gaps = 35/204 (17%)

Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           L  +L  ++    E      +R +L+  A  H +G++HRD+KP N L  +   D  LK  
Sbjct: 85  LSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISA---DGVLKIA 141

Query: 112 DFGLSDFIKPGKKFQ--DIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF 167
           DFGL+      +       V + +Y APE+L   RK  P  D+W++G I   LL G  P 
Sbjct: 142 DFGLARLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGS-PL 200

Query: 168 WDKTEDG-----IFKEV----------LRNKPDF--------RRKPW----PSISNSAKD 200
           +    D      +F+ +          L + PD+        +  P     P  S  A D
Sbjct: 201 FPGENDIEQLAIVFRTLGTPNEETWPGLTSLPDYNKITFPESKPIPLEEIFPDASPEALD 260

Query: 201 FVKKLLVKDPRARLTAAQALSHPW 224
            +K LLV DP  RL+AA+AL HP+
Sbjct: 261 LLKGLLVYDPSKRLSAAEALRHPY 284

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173664 cd05573, STKc_ROCK_NDR_like, Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

 Score =  100 bits (252), Expect = 1e-23
 Identities = 62/209 (29%), Positives = 93/209 (44%), Gaps = 38/209 (18%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG+L+  +L +KD  + E+ A   + +++      H  G +HRD+KP+N L      D  
Sbjct: 85  GGDLM-NLLIRKD-VFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILID---ADGH 139

Query: 108 LKATDFGLS-DFIKPGKKFQD-----------------------------IVGSAYYVAP 137
           +K  DFGL     K   +                                 VG+  Y+AP
Sbjct: 140 IKLADFGLCKKMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAP 199

Query: 138 EVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 196
           EVL+    G E D WS+GVI Y +L G  PF+  T    + +++  K   R  P P +S 
Sbjct: 200 EVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNKIINWKESLRFPPDPPVSP 259

Query: 197 SAKDFVKKLLVKDPRARLTAA-QALSHPW 224
            A D + +LL  DP  RL +  +  SHP+
Sbjct: 260 EAIDLICRLLC-DPEDRLGSFEEIKSHPF 287

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Proteins in this subfamily are involved in regulating many cellular functions including contraction, motility, division, proliferation, apoptosis, morphogenesis, and cytokinesis. Length = 350

>gnl|CDD|173669 cd05578, STKc_Yank1, Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

 Score = 98.9 bits (247), Expect = 1e-23
 Identities = 46/148 (31%), Positives = 69/148 (46%), Gaps = 13/148 (8%)

Query: 83  HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 142
           H  G++HRD+KP+N L     E   +  TDF ++  + P        G+  Y+APEVL R
Sbjct: 117 HSKGIIHRDIKPDNILLD---EQGHVHITDFNIATKVTPDTLTTSTSGTPGYMAPEVLCR 173

Query: 143 K-SGPESDVWSIGVITYILLCGRRPFWDKT---EDGIFKEVLRNKPDFRRKPWPSISNSA 198
           +      D WS+GV  Y  L G+RP+   +    D I  +       +      + S  A
Sbjct: 174 QGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQETADVLY----PATWSTEA 229

Query: 199 KDFVKKLLVKDPRARL--TAAQALSHPW 224
            D + KLL +DP+ RL        +HP+
Sbjct: 230 IDAINKLLERDPQKRLGDNLKDLKNHPY 257

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A. Length = 258

>gnl|CDD|173728 cd06614, STKc_PAK, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

 Score = 98.4 bits (246), Expect = 3e-23
 Identities = 62/192 (32%), Positives = 98/192 (51%), Gaps = 9/192 (4%)

Query: 47  EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 106
           +GG L D I+ +   R  E   A V R++L+     H   ++HRD+K +N L      D 
Sbjct: 98  DGGSLTD-IITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSK---DG 153

Query: 107 SLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGR 164
           S+K  DFG +  +   K K   +VG+ Y++APEV+KRK  GP+ D+WS+G++   +  G 
Sbjct: 154 SVKLADFGFAAQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGE 213

Query: 165 RPFWDKT-EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 223
            P+  +     +F    +  P  +       S   KDF+ K LVKDP  R +A + L HP
Sbjct: 214 PPYLREPPLRALFLITTKGIPPLKNPE--KWSPEFKDFLNKCLVKDPEKRPSAEELLQHP 271

Query: 224 WVREGGDASEIP 235
           ++++     E  
Sbjct: 272 FLKKACPKEEFA 283

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). Group II PAKs contain a PBD and a catalytic domain, but lack other motifs found in group I PAKs. Since group II PAKs do not contain an obvious AID, they may be regulated differently from group I PAKs. Group I PAKs interact with the SH3 containing proteins Nck, Grb2 and PIX; no such binding has been demonstrated for group II PAKs. Length = 286

>gnl|CDD|173726 cd06610, STKc_OSR1_SPAK, Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

 Score = 97.0 bits (242), Expect = 6e-23
 Identities = 59/194 (30%), Positives = 89/194 (45%), Gaps = 21/194 (10%)

Query: 44  RLCEGGELLDRILAK-KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
               GG LLD + +        E   A V++++L+     H +G +HRD+K  N L    
Sbjct: 79  PYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLG-- 136

Query: 103 KEDSSLKATDFGLSDFI-KPG----KKFQDIVGSAYYVAPEVLKRKSG--PESDVWSIGV 155
            ED S+K  DFG+S  +   G    K  +  VG+  ++APEV+++  G   ++D+WS G 
Sbjct: 137 -EDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFG- 194

Query: 156 ITYI-LLCGRRPFWDKTEDGIFKEVLRNKP-----DFRRKPWPSISNSAKDFVKKLLVKD 209
           IT I L  G  P+       +    L+N P         K +   S S +  +   L KD
Sbjct: 195 ITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLETGADYKKY---SKSFRKMISLCLQKD 251

Query: 210 PRARLTAAQALSHP 223
           P  R TA + L H 
Sbjct: 252 PSKRPTAEELLKHK 265

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 and SPAK contain a conserved C-terminal (CCT) domain, which recognizes a unique motif ([RK]FX[VI]) present in their activating kinases (WNK1/WNK4) and their substrates. Length = 267

>gnl|CDD|132988 cd06657, STKc_PAK4, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

 Score = 97.8 bits (243), Expect = 7e-23
 Identities = 65/201 (32%), Positives = 109/201 (54%), Gaps = 10/201 (4%)

Query: 47  EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 106
           EGG L D +     +R  E+  A V   +L+  +  H  G++HRD+K ++ L      D 
Sbjct: 100 EGGALTDIV---THTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLT---HDG 153

Query: 107 SLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGR 164
            +K +DFG  +   K   + + +VG+ Y++APE++ R   GPE D+WS+G++   ++ G 
Sbjct: 154 RVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE 213

Query: 165 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 224
            P++++      K +  N P  + K    +S S K F+ +LLV+DP  R TAA+ L HP+
Sbjct: 214 PPYFNEPPLKAMKMIRDNLPP-KLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPF 272

Query: 225 VREGGDASEIPIDISVLNNMR 245
           + + G  S I + +   N MR
Sbjct: 273 LAKAGPPSCI-VPLMRQNRMR 292

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell morphology and cytoskeletal organization. It is essential for embryonic viability and proper neural development. Mice lacking PAK4 die due to defects in the fetal heart. In addition, their spinal cord motor neurons showed failure to differentiate and migrate. PAK4 also plays a role in cell survival and tumorigenesis. It is overexpressed in many primary tumors including colon, esophageal, and mammary tumors. PAK4 has also been implicated in viral and bacterial infection pathways. Length = 292

>gnl|CDD|173674 cd05583, STKc_MSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

 Score = 97.2 bits (242), Expect = 9e-23
 Identities = 66/186 (35%), Positives = 100/186 (53%), Gaps = 28/186 (15%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKED 105
           GGEL   +  ++   +TE +  V + ++  V A  HLH  G+++RD+K EN L  S   +
Sbjct: 89  GGELFTHLYQRE--HFTESEVRVYIAEI--VLALDHLHQLGIIYRDIKLENILLDS---E 141

Query: 106 SSLKATDFGLSDFIKPGKKFQ--DIVGSAYYVAPEVLKRKSGPESDV---WSIGVITYIL 160
             +  TDFGLS      ++ +     G+  Y+APEV++  SG        WS+GV+T+ L
Sbjct: 142 GHVVLTDFGLSKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFEL 201

Query: 161 LCGRRPFWDKTEDG-------IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRAR 213
           L G  PF   T DG       I + +L++KP F      ++S  A+DF++KLL KDP+ R
Sbjct: 202 LTGASPF---TVDGEQNSQSEISRRILKSKPPFP----KTMSAEARDFIQKLLEKDPKKR 254

Query: 214 LTAAQA 219
           L A  A
Sbjct: 255 LGANGA 260

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines. This triggers phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) in the C-terminal extension of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSKs are predominantly nuclear proteins. They are widely expressed in many tissues including heart, brain, lung, liver, kidney, and pancreas. There are two isoforms of MSK, called MSK1 and MSK2. Length = 288

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 96.6 bits (241), Expect = 1e-22
 Identities = 58/183 (31%), Positives = 82/183 (44%), Gaps = 35/183 (19%)

Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI--KPGKKFQDIVGS 131
           Q+L+  A CH H ++HRD+KPEN L     E   LK  DFG +  +  +P     D V +
Sbjct: 108 QLLQAIAYCHSHNIIHRDIKPENILV---SESGVLKLCDFGFARALRARPASPLTDYVAT 164

Query: 132 AYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK----------- 177
            +Y APE+L      G   DVW+IG I   LL G   F   ++ D ++            
Sbjct: 165 RWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPS 224

Query: 178 --EVLRNKPDFRRKPWPSI--------------SNSAKDFVKKLLVKDPRARLTAAQALS 221
             E+  + P F    +P                S+ A DF+K  L  DP+ RLT  + L 
Sbjct: 225 HQELFSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284

Query: 222 HPW 224
           HP+
Sbjct: 285 HPY 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|173703 cd05612, STKc_PRKX_like, Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

 Score = 96.7 bits (241), Expect = 1e-22
 Identities = 53/154 (34%), Positives = 80/154 (51%), Gaps = 23/154 (14%)

Query: 83  HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD----IVGSAYYVAPE 138
           H   +V+RD+KPEN L      +  +K TDFG +      KK +D    + G+  Y+APE
Sbjct: 118 HSKEIVYRDLKPENILLDK---EGHIKLTDFGFA------KKLRDRTWTLCGTPEYLAPE 168

Query: 139 VLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS 197
           V++ K      D W++G++ Y +L G  PF+D    GI++++L  K +F R     +   
Sbjct: 169 VIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPR----HLDLY 224

Query: 198 AKDFVKKLLVKDPRARL-----TAAQALSHPWVR 226
           AKD +KKLLV D   RL      A    +H W +
Sbjct: 225 AKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFK 258

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyte/macrophage lineage differentiation, renal cell epithelial migration, and tubular morphogenesis in the developing kidney. Length = 291

>gnl|CDD|132940 cd06609, STKc_MST3_like, Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

 Score = 96.1 bits (240), Expect = 1e-22
 Identities = 58/202 (28%), Positives = 94/202 (46%), Gaps = 10/202 (4%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
           C GG  LD +   K  +  E   A ++R++L      H  G +HRD+K  N L     E+
Sbjct: 81  CGGGSCLDLL---KPGKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLS---EE 134

Query: 106 SSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRKSGPE-SDVWSIGVITYILLCG 163
             +K  DFG+S  +     K    VG+ +++APEV+K+    E +D+WS+G+    L  G
Sbjct: 135 GDVKLADFGVSGQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKG 194

Query: 164 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 223
             P  D     +   + +N P          S   KDFV   L KDP+ R +A + L H 
Sbjct: 195 EPPLSDLHPMRVLFLIPKNNPP--SLEGNKFSKPFKDFVSLCLNKDPKERPSAKELLKHK 252

Query: 224 WVREGGDASEIPIDISVLNNMR 245
           ++++    S + + I  +   +
Sbjct: 253 FIKKAKKTSYLTLLIERIKKWK 274

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN) signaling pathway, and plays a role in cytokinesis. SPS1 plays a role in regulating proteins required for spore wall formation. MST4 plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. STK25 may play a role in the regulation of cell migration and polarization. Length = 274

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score = 96.1 bits (240), Expect = 3e-22
 Identities = 65/202 (32%), Positives = 91/202 (45%), Gaps = 34/202 (16%)

Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           L++++  K    T  D    +   LR     H + ++HRD+KP N L  S   D  LK  
Sbjct: 88  LEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIAS---DGVLKLA 144

Query: 112 DFGLS-DFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW 168
           DFGL+  F  P +K    V + +Y APE+L   R  G   D+WS+G I +  L  R PF 
Sbjct: 145 DFGLARSFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCI-FAELLLRVPFL 203

Query: 169 DKTED-----GIFKEVL-----RNKPDFRRKP----------------WPSISNSAKDFV 202
               D      IF E L      N P     P                +P+ S+ A D +
Sbjct: 204 PGDSDIDQLGKIF-EALGTPTEENWPGVTSLPDYVEFKPFPPTPLKQIFPAASDDALDLL 262

Query: 203 KKLLVKDPRARLTAAQALSHPW 224
           ++LL  +P  R+TA QAL HP+
Sbjct: 263 QRLLTLNPNKRITARQALEHPY 284

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173665 cd05574, STKc_phototropin_like, Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

 Score = 95.0 bits (237), Expect = 8e-22
 Identities = 67/218 (30%), Positives = 99/218 (45%), Gaps = 44/218 (20%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE-CHLHGLVHRDMKPENFLFKSAKE 104
           C GGEL   +  +     +E+ A     ++L +A E  HL G+V+RD+KPEN L     E
Sbjct: 83  CPGGELFRLLQRQPGKCLSEEVARFYAAEVL-LALEYLHLLGIVYRDLKPENILLH---E 138

Query: 105 DSSLKATDFGLS----------------------------DFIK--PGKKFQDIVGSAYY 134
              +  +DF LS                            +     P  +    VG+  Y
Sbjct: 139 SGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEY 198

Query: 135 VAPEVLKRKSGPESDV--WSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 192
           +APEV+    G  S V  W++G++ Y +L G  PF     D  F  +L+ +  F   P  
Sbjct: 199 IAPEVIS-GDGHGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNILKKEVTFPGSP-- 255

Query: 193 SISNSAKDFVKKLLVKDPRARL----TAAQALSHPWVR 226
            +S+SA+D ++KLLVKDP  RL     AA+   HP+ R
Sbjct: 256 PVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFR 293

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-terminal photosensory domain and a C-terminal catalytic domain. The N-terminal domain contains two LOV (Light, Oxygen or Voltage) domains that binds FMN. Photoexcitation of the LOV domains results in autophosphorylation at multiple sites and activation of the catalytic domain. Neurospora crassa nrc-2 plays a role in growth and development by controlling entry into the conidiation program. Length = 316

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score = 94.1 bits (235), Expect = 9e-22
 Identities = 60/204 (29%), Positives = 92/204 (45%), Gaps = 34/204 (16%)

Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           L  +L   + ++TE      ++Q+L      H +G++HRD+K  N L  +   D  LK  
Sbjct: 86  LTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINN---DGVLKLA 142

Query: 112 DFGLSDFIKPGKK--FQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF 167
           DFGL+          + + V + +Y  PE+L    + GPE D+WS+G I   L  G+  F
Sbjct: 143 DFGLARPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIF 202

Query: 168 WDKTE----DGIFKEV----------LRNKPDFR----RKPWPS---------ISNSAKD 200
              TE    + IF+            +   P F     +KP+           I  SA D
Sbjct: 203 QGSTELEQLEKIFELCGSPTDENWPGVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALD 262

Query: 201 FVKKLLVKDPRARLTAAQALSHPW 224
            + KLL  DP+ R++A QAL H +
Sbjct: 263 LLDKLLTLDPKKRISADQALQHEY 286

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|132963 cd06632, STKc_MEKK1_plant, Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

 Score = 92.9 bits (231), Expect = 2e-21
 Identities = 61/186 (32%), Positives = 92/186 (49%), Gaps = 21/186 (11%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG L  ++L K  S + E    +  RQ+L      H    VHRD+K  N L  +   +  
Sbjct: 86  GGSLA-KLLKKYGS-FPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDT---NGV 140

Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRR 165
           +K  DFG++  +      +   GS Y++APEV+ ++   G  +D+WS+G  T + +   +
Sbjct: 141 VKLADFGMAKQVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGC-TVLEMATGK 199

Query: 166 PFWDKTED--GIFKEVLRNKPDFRRKPWPSI----SNSAKDFVKKLLVKDPRARLTAAQA 219
           P W + E    +FK         R K  P I    S+ AKDF+ K L +DP  R TAA+ 
Sbjct: 200 PPWSQLEGVAAVFKIG-------RSKELPPIPDHLSDEAKDFILKCLQRDPSLRPTAAEL 252

Query: 220 LSHPWV 225
           L HP+V
Sbjct: 253 LEHPFV 258

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidopsis thaliana MEKK1 activates MPK4, a MAPK that regulates systemic acquired resistance. MEKK1 also participates in the regulation of temperature-sensitive and tissue-specific cell death. Length = 258

>gnl|CDD|173691 cd05600, STKc_Sid2p_Dbf2p, Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

 Score = 94.0 bits (234), Expect = 2e-21
 Identities = 54/160 (33%), Positives = 81/160 (50%), Gaps = 12/160 (7%)

Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           +M       H  G +HRD+KPENFL  +      +K TDFGLS  I        +VGS  
Sbjct: 109 EMFEAVDALHELGYIHRDLKPENFLIDA---SGHIKLTDFGLSKGIV--TYANSVVGSPD 163

Query: 134 YVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR---- 188
           Y+APEVL+ +      D WS+G + Y  LCG  PF   T +  ++ +   K   +R    
Sbjct: 164 YMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYD 223

Query: 189 KPWPSISNSAKDFVKKLLVKDPRARLTAAQAL-SHPWVRE 227
            P  ++S+ A D + KL+  DP  R  + + + +HP+ +E
Sbjct: 224 DPRFNLSDEAWDLITKLI-NDPSRRFGSLEDIKNHPFFKE 262

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. Dbf2p is important in regulating the mitotic exit network (MEN) and in cytokinesis. Length = 333

>gnl|CDD|132990 cd06659, STKc_PAK6, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

 Score = 93.6 bits (232), Expect = 2e-21
 Identities = 58/185 (31%), Positives = 100/185 (54%), Gaps = 9/185 (4%)

Query: 47  EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 106
           +GG L D +     +R  E+  A V   +L+     H  G++HRD+K ++ L      D 
Sbjct: 101 QGGALTDIV---SQTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTL---DG 154

Query: 107 SLKATDFGLSDFI-KPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGR 164
            +K +DFG    I K   K + +VG+ Y++APEV+ R   G E D+WS+G++   ++ G 
Sbjct: 155 RVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGE 214

Query: 165 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 224
            P++  +     K  LR+ P  + K    IS   +DF++++L ++P+ R TA + L HP+
Sbjct: 215 PPYFSDSPVQAMKR-LRDSPPPKLKNAHKISPVLRDFLERMLTREPQERATAQELLDHPF 273

Query: 225 VREGG 229
           + + G
Sbjct: 274 LLQTG 278

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role in stress responses through its activation by the mitogen-activated protein kinase (MAPK) p38 and MAPK kinase 6 (MKK6) pathway. PAK6 is highly expressed in the brain. It is not required for viability, but together with PAK5, it is required for normal levels of locomotion and activity, and for learning and memory. Increased expression of PAK6 is found in primary and metastatic prostate cancer. PAK6 may play a role in the regulation of motility. Length = 297

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 93.0 bits (232), Expect = 5e-21
 Identities = 57/199 (28%), Positives = 94/199 (47%), Gaps = 42/199 (21%)

Query: 74  QMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI--- 128
           Q+LR     +LH   ++HRD+KP N L      +  LK  DFGL+  + P +  +     
Sbjct: 111 QILR--GLKYLHSANVIHRDLKPSNIL---VNSNCDLKICDFGLARGVDPDEDEKGFLTE 165

Query: 129 -VGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF---------WDK------ 170
            V + +Y APE+L    +     D+WS+G I   LL  R+P           +       
Sbjct: 166 YVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELL-TRKPLFPGRDYIDQLNLIVEVLG 224

Query: 171 --TEDGI-------FKEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAA 217
             +E+ +        +  L++ P   +KP     P  S  A D ++K+LV DP+ R+TA 
Sbjct: 225 TPSEEDLKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITAD 284

Query: 218 QALSHPWVREGGDASEIPI 236
           +AL+HP++ +  D  + P+
Sbjct: 285 EALAHPYLAQLHDPEDEPV 303

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|132989 cd06658, STKc_PAK5, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

 Score = 91.6 bits (227), Expect = 9e-21
 Identities = 60/190 (31%), Positives = 102/190 (53%), Gaps = 9/190 (4%)

Query: 47  EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 106
           EGG L D +     +R  E+  A V   +LR  +  H  G++HRD+K ++ L  S   D 
Sbjct: 102 EGGALTDIV---THTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTS---DG 155

Query: 107 SLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGR 164
            +K +DFG  +   K   K + +VG+ Y++APEV+ R   G E D+WS+G++   ++ G 
Sbjct: 156 RIKLSDFGFCAQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGE 215

Query: 165 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 224
            P++++      + +  N P  R K    +S+  + F+  +LV++P  R TA + L HP+
Sbjct: 216 PPYFNEPPLQAMRRIRDNLPP-RVKDSHKVSSVLRGFLDLMLVREPSQRATAQELLQHPF 274

Query: 225 VREGGDASEI 234
           ++  G  S I
Sbjct: 275 LKLAGPPSCI 284

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly expressed in the brain. It is not required for viability, but together with PAK6, it is required for normal levels of locomotion and activity, and for learning and memory. PAK5 cooperates with Inca (induced in neural crest by AP2) in the regulation of cell adhesion and cytoskeletal organization in the embryo and in neural crest cells during craniofacial development. PAK5 may also play a role in controlling the signaling of Raf-1, an effector of Ras, at the mitochondria. Length = 292

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 89.2 bits (222), Expect = 6e-20
 Identities = 56/179 (31%), Positives = 81/179 (45%), Gaps = 29/179 (16%)

Query: 71  VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 130
           ++RQ+LR     H H +VHRD+KP+N L  S   D  +K  DFGL+           +V 
Sbjct: 112 LMRQLLRGVDFLHSHRIVHRDLKPQNILVTS---DGQVKIADFGLARIYSFEMALTSVVV 168

Query: 131 SAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG-----IF-------- 176
           + +Y APEVL + S     D+WS+G I   L   RRP +  T +      IF        
Sbjct: 169 TLWYRAPEVLLQSSYATPVDMWSVGCIFAELF-RRRPLFRGTSEADQLDKIFDVIGLPSE 227

Query: 177 ----KEVLRNKPDFRRKP-------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 224
               + V   +  F            P I     D +KK+L  +P  R++A +AL HP+
Sbjct: 228 EEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPY 286

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173662 cd05571, STKc_PKB, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

 Score = 89.5 bits (222), Expect = 7e-20
 Identities = 57/179 (31%), Positives = 91/179 (50%), Gaps = 17/179 (9%)

Query: 44  RLC------EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 97
           RLC       GGEL   +   ++  ++E  A     +++      H   +V+RD+K EN 
Sbjct: 69  RLCFVMEYANGGELFFHL--SRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENL 126

Query: 98  LFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGV 155
           +     +D  +K TDFGL  + I  G   +   G+  Y+APEVL+    G   D W +GV
Sbjct: 127 MLD---KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 183

Query: 156 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 214
           + Y ++CGR PF+++  + +F+ +L  +  F R     +S  AK  +  LL KDP+ RL
Sbjct: 184 VMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRT----LSPEAKSLLAGLLKKDPKQRL 238

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having been implicated in tumor initiation, progression, and metastasis. Length = 323

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 88.0 bits (219), Expect = 1e-19
 Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 31/204 (15%)

Query: 49  GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 108
           G L   +  +K   ++E     ++ Q+L+  A  H HG  HRD+KPEN L    +    +
Sbjct: 82  GNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPE---VV 138

Query: 109 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRP 166
           K  DFGL+  I+    + D V + +Y APE+L R +   S  D+W++G I   L   R  
Sbjct: 139 KIADFGLAREIRSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPL 198

Query: 167 FWDKTE-DGIFK--EVL-----RNKPD---------FR---------RKPWPSISNSAKD 200
           F   +E D ++K   VL     ++ P+         FR          +  P+ S  A D
Sbjct: 199 FPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASKLGFRFPQFAPTSLHQLIPNASPEAID 258

Query: 201 FVKKLLVKDPRARLTAAQALSHPW 224
            +K +L  DP+ R TA+QAL HP+
Sbjct: 259 LIKDMLRWDPKKRPTASQALQHPY 282

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|132978 cd06647, STKc_PAK_I, Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

 Score = 88.0 bits (218), Expect = 2e-19
 Identities = 54/182 (29%), Positives = 95/182 (52%), Gaps = 11/182 (6%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG L D +    ++   E   A V R+ L+     H + ++HRD+K +N L      D S
Sbjct: 100 GGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM---DGS 153

Query: 108 LKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRR 165
           +K TDFG    I P + K   +VG+ Y++APEV+ RK+ GP+ D+WS+G++   ++ G  
Sbjct: 154 VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEP 213

Query: 166 PFWDKTE-DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 224
           P+ ++     ++       P+ +      +S   +DF+ + L  D   R +A + L HP+
Sbjct: 214 PYLNENPLRALYLIATNGTPELQNP--EKLSAIFRDFLNRCLEMDVEKRGSAKELLQHPF 271

Query: 225 VR 226
           ++
Sbjct: 272 LK 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group I PAKs, also called conventional PAKs, include PAK1, PAK2, and PAK3. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). They interact with the SH3 domain containing proteins Nck, Grb2 and PIX. Binding of group I PAKs to activated GTPases leads to conformational changes that destabilize the AID, allowing autophosphorylation and full activation of the kinase domain. Known group I PAK substrates include MLCK, Bad, Raf, MEK1, LIMK, Merlin, Vimentin, Myc, Stat5a, and Aurora A, among others. Length = 293

>gnl|CDD|132943 cd06612, STKc_MST1_2, Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

 Score = 87.3 bits (217), Expect = 2e-19
 Identities = 60/196 (30%), Positives = 94/196 (47%), Gaps = 35/196 (17%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
           C  G + D I+   +   TE++ A ++ Q L+     H +  +HRD+K  N L     E+
Sbjct: 80  CGAGSVSD-IMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLN---EE 135

Query: 106 SSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLC 162
              K  DFG+S        K   ++G+ +++APEV++ + G  +  D+WS+G IT I + 
Sbjct: 136 GQAKLADFGVSGQLTDTMAKRNTVIGTPFWMAPEVIQ-EIGYNNKADIWSLG-ITAIEMA 193

Query: 163 -GRRPFWDKTEDGIFKEVLRNKPDFR------RKPWPSISNSAK------DFVKKLLVKD 209
            G+ P               +    R       KP P++S+  K      DFVKK LVKD
Sbjct: 194 EGKPP-------------YSDIHPMRAIFMIPNKPPPTLSDPEKWSPEFNDFVKKCLVKD 240

Query: 210 PRARLTAAQALSHPWV 225
           P  R +A Q L HP++
Sbjct: 241 PEERPSAIQLLQHPFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a MAPK kinase) and MEKK1 (a MAPK kinase kinase) by acting as a MAPK kinase kinase kinase (MAPKKKK). Activation of JNK by MST1 leads to caspase activation and apoptosis. MST1 has also been implicated in cell proliferation and differentiation. Krs1 may regulate cell growth arrest and apoptosis in response to cellular stress. Length = 256

>gnl|CDD|173725 cd06608, STKc_myosinIII_like, Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

 Score = 87.7 bits (218), Expect = 2e-19
 Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 19/193 (9%)

Query: 45  LCEGGELLD--RILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           LC GG + D  + L KK  R  E+  A ++R+ LR  A  H + ++HRD+K +N L    
Sbjct: 90  LCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLT-- 147

Query: 103 KEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPE------SDVWSIGV 155
            +++ +K  DFG+S        +    +G+ Y++APEV+     P+      SDVWS+G 
Sbjct: 148 -KNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLG- 205

Query: 156 ITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKP--WPSISNSAKDFVKKLLVKDPRA 212
           IT I L  G+ P  D        ++ RN P   + P  W   S    DF+ + L+K+   
Sbjct: 206 ITAIELADGKPPLCDMHPMRALFKIPRNPPPTLKSPENW---SKKFNDFISECLIKNYEQ 262

Query: 213 RLTAAQALSHPWV 225
           R    + L HP++
Sbjct: 263 RPFMEELLEHPFI 275

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin III may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. It may also function as a cargo carrier during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. The Drosophila class III myosin, called NinaC (Neither inactivation nor afterpotential protein C), is critical in normal adaptation and termination of photoresponse. Vertebrates contain two isoforms of class III myosin, IIIA and IIIB. This subfamily also includes mammalian NIK-like embryo-specific kinase (NESK), Traf2- and Nck-interacting kinase (TNIK), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6). MAP4Ks are involved in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Length = 275

>gnl|CDD|173732 cd06628, STKc_MAPKKK_Byr2_like, Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

 Score = 86.4 bits (214), Expect = 4e-19
 Identities = 56/164 (34%), Positives = 87/164 (53%), Gaps = 18/164 (10%)

Query: 72  VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKK 124
           VRQ+L+     H  G++HRD+K  N L  +      +K +DFG+S  +       K    
Sbjct: 112 VRQILKGLNYLHNRGIIHRDIKGANILVDN---KGGIKISDFGISKKLEANSLSTKTNGA 168

Query: 125 FQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLRN 182
              + GS +++APEV+K+ S   ++D+WS+G +   +L G+ PF D T+   IFK     
Sbjct: 169 RPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENA 228

Query: 183 KPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
            P+      PS IS+ A DF++K    D   R TAA+ L HP++
Sbjct: 229 SPEI-----PSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast Byr2 is regulated by Ras1. It responds to pheromone signaling and controls mating through the MAPK pathway. Budding yeast Ste11 functions in MAPK cascades that regulate mating, high osmolarity glycerol, and filamentous growth responses. Length = 267

>gnl|CDD|173661 cd05570, STKc_PKC, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

 Score = 87.0 bits (216), Expect = 5e-19
 Identities = 51/152 (33%), Positives = 80/152 (52%), Gaps = 14/152 (9%)

Query: 83  HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK 141
           H  G+++RD+K +N L  S   +  +K  DFG+  + I  G       G+  Y+APE+L 
Sbjct: 113 HERGIIYRDLKLDNVLLDS---EGHIKIADFGMCKEGILGGVTTSTFCGTPDYIAPEILS 169

Query: 142 RKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 200
            +  GP  D W++GV+ Y +L G+ PF    ED +F+ +L ++  + R     +S  AK 
Sbjct: 170 YQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYPR----WLSKEAKS 225

Query: 201 FVKKLLVKDPRARL----TAAQAL-SHPWVRE 227
            +K  L K+P  RL    T  Q +  HP+ RE
Sbjct: 226 ILKSFLTKNPEKRLGCLPTGEQDIKGHPFFRE 257

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only require PS. PKCs phosphorylate and modify the activities of a wide variety of cellular proteins including receptors, enzymes, cytoskeletal proteins, transcription factors, and other kinases. They play a central role in signal transduction pathways that regulate cell migration and polarity, proliferation, differentiation, and apoptosis. Also included in this subfamily are the PKC-like proteins, called PKNs. Length = 318

>gnl|CDD|173757 cd08217, STKc_Nek2, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

 Score = 85.8 bits (213), Expect = 6e-19
 Identities = 58/188 (30%), Positives = 94/188 (50%), Gaps = 17/188 (9%)

Query: 46  CEGGELLDRIL-AKKDSRYTEKDAAV-VVRQMLRVAAECHL-----HGLVHRDMKPENFL 98
           CEGG+L   I   KK+ +Y E++    ++ Q+L    ECH      + ++HRD+KP N +
Sbjct: 83  CEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPAN-I 141

Query: 99  FKSAKEDSSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVI 156
           F  A    ++K  DFGL+  +     F +  VG+ YY++PE L       +SD+WS+G +
Sbjct: 142 FLDANN--NVKLGDFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCL 199

Query: 157 TYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRARLT 215
            Y L     PF  + +  +  ++   K  FRR   P   S+   + +K +L  DP  R +
Sbjct: 200 IYELCALSPPFTARNQLQLASKIKEGK--FRR--IPYRYSSELNEVIKSMLNVDPDKRPS 255

Query: 216 AAQALSHP 223
             + L  P
Sbjct: 256 TEELLQLP 263

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exit. NIMA is involved in nuclear membrane fission. Vertebrate Nek2 is a cell cycle-regulated STK, localized in centrosomes and kinetochores, that regulates centrosome splitting at the G2/M phase. It also interacts with other mitotic kinases such as Polo-like kinase 1 and may play a role in spindle checkpoint. An increase in the expression of the human NEK2 gene is strongly associated with the progression of non-Hodgkin lymphoma. Length = 265

>gnl|CDD|173677 cd05586, STKc_Sck1_like, Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

 Score = 86.5 bits (214), Expect = 1e-18
 Identities = 53/172 (30%), Positives = 88/172 (51%), Gaps = 11/172 (6%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGEL   +  +K+ R++E  A   + +++      H + +V+RD+KPEN L  +      
Sbjct: 80  GGELFWHL--QKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDA---TGH 134

Query: 108 LKATDFGLSDF-IKPGKKFQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCGR 164
           +   DFGLS   +   K      G+  Y+APEVL  + G     D WS+GV+ + + CG 
Sbjct: 135 IALCDFGLSKANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGW 194

Query: 165 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA 216
            PF+ +    +++ +   K  F   P   +S+  + FVK LL ++P+ RL A
Sbjct: 195 SPFYAEDTQQMYRNIAFGKVRF---PKNVLSDEGRQFVKGLLNRNPQHRLGA 243

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of yeast to environmental changes. Length = 330

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 85.2 bits (211), Expect = 1e-18
 Identities = 54/179 (30%), Positives = 79/179 (44%), Gaps = 31/179 (17%)

Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH + ++HRD+KP+N L         LK  DFGL+  F  P   F + V + 
Sbjct: 108 QLLKGIAFCHENRVLHRDLKPQNLLINK---RGELKLADFGLARAFGIPVNTFSNEVVTL 164

Query: 133 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--------- 181
           +Y AP+VL   R      D+WS+G I   ++ GR  F     +    ++ R         
Sbjct: 165 WYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTEST 224

Query: 182 ---------NKPDFRRKP-------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 224
                     KP F R P       +P       D + +LL  +P  R++A  AL HPW
Sbjct: 225 WPGISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPW 283

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 84.7 bits (210), Expect = 2e-18
 Identities = 58/181 (32%), Positives = 90/181 (49%), Gaps = 35/181 (19%)

Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD-FIKPGKKFQDIVGSA 132
           Q+L+  A CH H ++HRD+KP+N L      + +LK  DFGL+  F  P + +   V + 
Sbjct: 107 QLLQGIAYCHSHRVLHRDLKPQNLLIDR---EGALKLADFGLARAFGVPVRTYTHEVVTL 163

Query: 133 YYVAPEVL---KRKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK--EVL----- 180
           +Y APE+L   ++ S P  D+WSIG I +  +  RRP +  D   D +F+    L     
Sbjct: 164 WYRAPEILLGSRQYSTP-VDIWSIGCI-FAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDE 221

Query: 181 ------RNKPDF-------RRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHP 223
                  + PD+        R+      P++     D + K+LV DP  R++A  AL HP
Sbjct: 222 DVWPGVTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHP 281

Query: 224 W 224
           +
Sbjct: 282 Y 282

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 84.7 bits (210), Expect = 2e-18
 Identities = 57/185 (30%), Positives = 86/185 (46%), Gaps = 35/185 (18%)

Query: 71  VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIV 129
           ++ Q L+    CH H  +HRD+KPEN L     +   +K  DFG +  +  PG  + D V
Sbjct: 105 IIWQTLQAVNFCHKHNCIHRDVKPENILI---TKQGQIKLCDFGFARILTGPGDDYTDYV 161

Query: 130 GSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTED-----------GIF 176
            + +Y APE+L    + GP  DVW+IG +   LL G +P W    D           G  
Sbjct: 162 ATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTG-QPLWPGKSDVDQLYLIRKTLGDL 220

Query: 177 ----KEVLRNKPDFR---------RKP----WPSISNSAKDFVKKLLVKDPRARLTAAQA 219
               +++      F+         R+P    +P+IS+ A  F+K  L  DP  RL+  + 
Sbjct: 221 IPRHQQIFSTNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEEL 280

Query: 220 LSHPW 224
           L HP+
Sbjct: 281 LEHPY 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|173685 cd05594, STKc_PKB_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

 Score = 85.5 bits (211), Expect = 2e-18
 Identities = 60/184 (32%), Positives = 97/184 (52%), Gaps = 26/184 (14%)

Query: 44  RLC------EGGELL-----DRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 92
           RLC       GGEL      +R+ ++  +R+     A +V  +  + +E     +V+RD+
Sbjct: 69  RLCFVMEYANGGELFFHLSRERVFSEDRARFY---GAEIVSALDYLHSE---KNVVYRDL 122

Query: 93  KPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDV 150
           K EN +     +D  +K TDFGL  + IK G   +   G+  Y+APEVL+    G   D 
Sbjct: 123 KLENLMLD---KDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDW 179

Query: 151 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDP 210
           W +GV+ Y ++CGR PF+++  + +F+ +L  +  F R    ++S  AK  +  LL KDP
Sbjct: 180 WGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLSPEAKSLLSGLLKKDP 235

Query: 211 RARL 214
           + RL
Sbjct: 236 KQRL 239

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficient in PKB-alpha exhibit perinatal morbidity, growth retardation, reduction in body weight accompanied by reduced sizes of multiple organs, and enhanced apoptosis in some cell types. PKB-alpha activity has been reported to be frequently elevated in breast and prostate cancers. In some cancer cells, PKB-alpha may act as a suppressor of metastasis. Length = 325

>gnl|CDD|173675 cd05584, STKc_p70S6K, Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

 Score = 84.8 bits (210), Expect = 2e-18
 Identities = 60/157 (38%), Positives = 82/157 (52%), Gaps = 24/157 (15%)

Query: 83  HLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEV 139
           HLH  G+++RD+KPEN L  +      +K TDFGL  + I  G       G+  Y+APE+
Sbjct: 115 HLHQQGIIYRDLKPENILLDA---QGHVKLTDFGLCKESIHEGTVTHTFCGTIEYMAPEI 171

Query: 140 LKRKS-GPESDVWSIGVITYILLCGRRPFW----DKTEDGIFKEVLRNKPDFRRKPWPSI 194
           L R   G   D WS+G + Y +L G  PF      KT D I K  L N P       P +
Sbjct: 172 LMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKL-NLP-------PYL 223

Query: 195 SNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVR 226
           +  A+D +KKLL ++P +RL      AA+  SHP+ R
Sbjct: 224 TPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFR 260

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the insulin receptor substrate IRS-1, among others. Mammals contain two isoforms of p70S6K, named S6K1 and S6K2 (or S6K-beta). Length = 323

>gnl|CDD|173686 cd05595, STKc_PKB_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

 Score = 85.1 bits (210), Expect = 3e-18
 Identities = 58/179 (32%), Positives = 93/179 (51%), Gaps = 17/179 (9%)

Query: 44  RLC------EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 97
           RLC       GGEL   +   ++  +TE+ A     +++      H   +V+RD+K EN 
Sbjct: 69  RLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENL 126

Query: 98  LFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGV 155
           +     +D  +K TDFGL  + I  G   +   G+  Y+APEVL+    G   D W +GV
Sbjct: 127 MLD---KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 183

Query: 156 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 214
           + Y ++CGR PF+++  + +F+ +L  +  F R    ++S  AK  +  LL KDP+ RL
Sbjct: 184 VMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRL 238

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in PKB-beta display normal growth weights but exhibit severe insulin resistance and diabetes, accompanied by lipoatrophy and B-cell failure. Length = 323

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 85.0 bits (211), Expect = 3e-18
 Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 36/215 (16%)

Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           L+ I+  K  + ++     +V Q+LR     H  G++HRD+KP N    +  ED  LK  
Sbjct: 106 LNNIV--KCQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNI---AVNEDCELKIL 160

Query: 112 DFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGR----- 164
           DFGL+       +    V + +Y APE++          D+WS+G I   LL G+     
Sbjct: 161 DFGLAR--HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPG 218

Query: 165 ------------------RPFWDKTEDGIFKEVLRNKPDFRRKPWPSI----SNSAKDFV 202
                                  K      +  +++ P   +K +  +    +  A D +
Sbjct: 219 SDHIDQLKRIMNLVGTPDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLL 278

Query: 203 KKLLVKDPRARLTAAQALSHPWVREGGDASEIPID 237
           +K+LV DP  R+TAA+AL+HP++ E  D  + P+ 
Sbjct: 279 EKMLVLDPDKRITAAEALAHPYLAEYHDPEDEPVA 313

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 84.5 bits (209), Expect = 4e-18
 Identities = 62/192 (32%), Positives = 94/192 (48%), Gaps = 34/192 (17%)

Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           Q+LR     H  G+VHRD+KP N L     E+  LK  DFGL+    P  +    V + Y
Sbjct: 116 QILRGLKYVHSAGVVHRDLKPSNILIN---ENCDLKICDFGLARIQDP--QMTGYVSTRY 170

Query: 134 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDK---TEDGIFKEVLRNKPDF-- 186
           Y APE++   +K   E D+WS G I   +L G+  F  K    +  I  ++L   PD   
Sbjct: 171 YRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVI 230

Query: 187 ----------------RRKPWP------SISNSAKDFVKKLLVKDPRARLTAAQALSHPW 224
                           +R+P P      +   SA D ++K+LV DP+ R++AA+AL+HP+
Sbjct: 231 NTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPY 290

Query: 225 VREGGDASEIPI 236
           +    D ++ P+
Sbjct: 291 LAPYHDPTDEPV 302

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173723 cd06605, PKc_MAPKK, Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

 Score = 83.5 bits (207), Expect = 4e-18
 Identities = 65/195 (33%), Positives = 98/195 (50%), Gaps = 28/195 (14%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH-LHGLVHRDMKPENFLFKSAK 103
             +GG L D+IL +   R  E+    +   +L+     H  H ++HRD+KP N L  S  
Sbjct: 80  YMDGGSL-DKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRG 138

Query: 104 EDSSLKATDFGLSDFIKPGK----KFQDIVGSAYYVAPEVLKRKSGP----ESDVWSIGV 155
           +   +K  DFG+S     G+      +  VG++ Y+APE   R  G     +SD+WS+G+
Sbjct: 139 Q---IKLCDFGVS-----GQLVNSLAKTFVGTSSYMAPE---RIQGNDYSVKSDIWSLGL 187

Query: 156 ITYILLCGRRPF--WDKTEDGIFKEVLR---NKPDFRRKPWPSISNSAKDFVKKLLVKDP 210
               L  GR P+   +   DGIF E+L+   N+P   R P    S   +DFV   L+KDP
Sbjct: 188 SLIELATGRFPYPPENDPPDGIF-ELLQYIVNEPP-PRLPSGKFSPDFQDFVNLCLIKDP 245

Query: 211 RARLTAAQALSHPWV 225
           R R +  + L HP++
Sbjct: 246 RERPSYKELLEHPFI 260

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity PKs that phosphorylate their downstream targets, MAPKs, at specific threonine and tyrosine residues. There are three MAPK subfamilies: extracellular signal-regulated kinase (ERK), c-Jun N-terminal kinase (JNK), and p38. In mammalian cells, there are seven MAPKKs (named MKK1-7) and 20 MAPKKKs. Each MAPK subfamily can be activated by at least two cognate MAPKKs and by multiple MAPKKKs. Length = 265

>gnl|CDD|173700 cd05609, STKc_MAST, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

 Score = 84.1 bits (208), Expect = 4e-18
 Identities = 51/159 (32%), Positives = 80/159 (50%), Gaps = 29/159 (18%)

Query: 83  HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF--------------IKPGKKFQD- 127
           H +G+VHRD+KP+N L  S      +K TDFGLS                 K  ++F D 
Sbjct: 118 HNYGIVHRDLKPDNLLITSM---GHIKLTDFGLSKIGLMSLTTNLYEGHIEKDTREFLDK 174

Query: 128 -IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD 185
            + G+  Y+APEV+ R+  G   D W++G+I Y  L G  PF+  T + +F +V+ +  +
Sbjct: 175 QVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIE 234

Query: 186 FRRKPWP----SISNSAKDFVKKLLVKDPRARLTAAQAL 220
                WP    ++   A+D + +LL ++P  RL    A 
Sbjct: 235 -----WPEGDEALPADAQDLISRLLRQNPLERLGTGGAF 268

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that are also expressed at neuromuscular junctions and postsynaptic densities. MAST1, MAST2, and MAST3 bind and phosphorylate the tumor suppressor PTEN, and may contribute to the regulation and stabilization of PTEN. MAST2 is involved in the regulation of the Fc-gamma receptor of the innate immune response in macrophages, and may also be involved in the regulation of the Na+/H+ exchanger NHE3. Length = 305

>gnl|CDD|173704 cd05613, STKc_MSK1_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

 Score = 83.5 bits (206), Expect = 5e-18
 Identities = 57/180 (31%), Positives = 97/180 (53%), Gaps = 26/180 (14%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGEL   +  ++  R+ E++  +   +++      H  G+++RD+K EN L  S   +  
Sbjct: 89  GGELFTHLSQRE--RFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDS---NGH 143

Query: 108 LKATDFGLS-DFIKPG-KKFQDIVGSAYYVAPEVLKRKSGPES---DVWSIGVITYILLC 162
           +  TDFGLS +F +   ++     G+  Y+AP++++   G      D WS+GV+ Y LL 
Sbjct: 144 VVLTDFGLSKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLT 203

Query: 163 GRRPFWDKTEDG-------IFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
           G  PF   T DG       I + +L+++P     P+P  +S  AKD +++LL+KDP+ RL
Sbjct: 204 GASPF---TVDGEKNSQAEISRRILKSEP-----PYPQEMSALAKDIIQRLLMKDPKKRL 255

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK1 plays a role in the regulation of translational control and transcriptional activation. It phosphorylates the transcription factors, CREB and NFkappaB. It also phosphorylates the nucleosomal proteins H3 and HMG-14. Increased phosphorylation of MEK1 is associated with the development of cerebral ischemic/hypoxic preconditioning. Length = 290

>gnl|CDD|173673 cd05582, STKc_RSK_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

 Score = 83.7 bits (207), Expect = 7e-18
 Identities = 61/177 (34%), Positives = 93/177 (52%), Gaps = 21/177 (11%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKED 105
           GG+L  R+   K+  +TE+D    + + L +A + HLH  G+++RD+KPEN L     E+
Sbjct: 82  GGDLFTRL--SKEVMFTEEDVKFYLAE-LALALD-HLHSLGIIYRDLKPENILLD---EE 134

Query: 106 SSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCG 163
             +K TDFGLS + I   KK     G+  Y+APEV+ R+   +S D WS GV+ + +L G
Sbjct: 135 GHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTG 194

Query: 164 RRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
             PF  K        +L+ K   P F       +S  A+  ++ L  ++P  RL A 
Sbjct: 195 SLPFQGKDRKETMTMILKAKLGMPQF-------LSPEAQSLLRALFKRNPANRLGAG 244

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylates all known RSK substrates. RSKs act as downstream effectors of mitogen-activated protein kinase (MAPK) and play key roles in mitogen-activated cell growth, differentiation, and survival. Mammals possess four RSK isoforms (RSK1-4) from distinct genes. RSK proteins are also referred to as MAP kinase-activated protein kinases (MAPKAPKs), p90-RSKs, or p90S6Ks. Length = 318

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score = 82.7 bits (205), Expect = 1e-17
 Identities = 55/184 (29%), Positives = 88/184 (47%), Gaps = 34/184 (18%)

Query: 72  VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVG 130
           + Q+L   A  H + ++HRD+K  N L  +      LK  DFGL+ ++  P K +  +V 
Sbjct: 112 MLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGI---LKICDFGLAREYGSPLKPYTQLVV 168

Query: 131 SAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFKEV----L 180
           + +Y APE+L   ++     D+WS+G I   LL  +  F  K+E    + IFK +     
Sbjct: 169 TLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTE 228

Query: 181 RNKPDF-------------------RRK-PWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           +  P F                   R+K P  S+S++  D + +LL  DP  R++A  AL
Sbjct: 229 KIWPGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDAL 288

Query: 221 SHPW 224
            HP+
Sbjct: 289 KHPY 292

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|173705 cd05614, STKc_MSK2_N, N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

 Score = 83.1 bits (205), Expect = 1e-17
 Identities = 58/193 (30%), Positives = 97/193 (50%), Gaps = 24/193 (12%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGE+   +  + +  ++E +      +++      H  G+V+RD+K EN L  S   +  
Sbjct: 89  GGEMFTHLYQRDN--FSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDS---EGH 143

Query: 108 LKATDFGLS-DFIKPGK-KFQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYILLCG 163
           +  TDFGLS +F+   K +     G+  Y+APE+++ K G     D WS+G++ + LL G
Sbjct: 144 VVLTDFGLSKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTG 203

Query: 164 RRPFW----DKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAA- 217
             PF       T+  + + +L+  P     P+PS I   A+D + KLL KDP+ RL A  
Sbjct: 204 ASPFTLEGERNTQSEVSRRILKCDP-----PFPSFIGPEAQDLLHKLLRKDPKKRLGAGP 258

Query: 218 ----QALSHPWVR 226
               +   HP+ +
Sbjct: 259 QGASEIKEHPFFK 271

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the NTD, which in turn phosphorylates downstream targets. MSK2 and MSK1 play nonredundant roles in activating histone H3 kinases, which play pivotal roles in compaction of the chromatin fiber. MSK2 is the required H3 kinase in response to stress stimuli and activation of the p38 MAPK pathway. MSK2 also plays a role in the pathogenesis of psoriasis. Length = 332

>gnl|CDD|173771 cd08529, STKc_FA2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

 Score = 81.8 bits (202), Expect = 1e-17
 Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 10/181 (5%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
            E G+L   +  ++     E        Q+L   A  H   ++HRD+K  N         
Sbjct: 81  AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLD---AY 137

Query: 106 SSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEVLKRKSGPE-SDVWSIGVITYILLCG 163
            ++K  D G++  +     F   IVG+ YY++PE+ + K   E SDVW++GV+ Y    G
Sbjct: 138 DNVKIGDLGVAKLLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTG 197

Query: 164 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           + PF    +  +  +++R        P     S      + + L KD R R    Q L +
Sbjct: 198 KHPFDANNQGALILKIIRG----VFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253

Query: 223 P 223
           P
Sbjct: 254 P 254

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cycle progression. No cellular function has yet been ascribed to CNK4. Length = 256

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 82.2 bits (203), Expect = 2e-17
 Identities = 60/189 (31%), Positives = 95/189 (50%), Gaps = 36/189 (19%)

Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD-FIKPGKKFQDIVGSA 132
           Q+LR  A CH H ++HRD+KP+N L    +  ++LK  DFGL+  F  P + F   V + 
Sbjct: 110 QILRGIAYCHSHRVLHRDLKPQNLLID--RRTNALKLADFGLARAFGIPVRTFTHEVVTL 167

Query: 133 YYVAPEVL---KRKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFKEVLR------ 181
           +Y APE+L   +  S P  D+WS+G I +  +  ++P +  D   D +FK + R      
Sbjct: 168 WYRAPEILLGSRHYSTP-VDIWSVGCI-FAEMVNQKPLFPGDSEIDELFK-IFRILGTPN 224

Query: 182 --------NKPDFRRK--PW---------PSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
                   + PD++     W         P++  +  D + K+L  DP  R+TA  AL H
Sbjct: 225 EETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284

Query: 223 PWVREGGDA 231
            + ++ GDA
Sbjct: 285 EYFKDLGDA 293

Length = 294

>gnl|CDD|173684 cd05593, STKc_PKB_gamma, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

 Score = 82.4 bits (203), Expect = 2e-17
 Identities = 59/186 (31%), Positives = 94/186 (50%), Gaps = 31/186 (16%)

Query: 44  RLC------EGGELL-----DRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHR 90
           RLC       GGEL      +R+ ++  +R+   +          V+A  +LH   +V+R
Sbjct: 69  RLCFVMEYVNGGELFFHLSRERVFSEDRTRFYGAEI---------VSALDYLHSGKIVYR 119

Query: 91  DMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPES 148
           D+K EN +     +D  +K TDFGL  + I      +   G+  Y+APEVL+    G   
Sbjct: 120 DLKLENLMLD---KDGHIKITDFGLCKEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAV 176

Query: 149 DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVK 208
           D W +GV+ Y ++CGR PF+++  + +F+ +L     F R    ++S  AK  +  LL+K
Sbjct: 177 DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFPR----TLSADAKSLLSGLLIK 232

Query: 209 DPRARL 214
           DP  RL
Sbjct: 233 DPNKRL 238

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulated in estrogen-deficient breast cancer cells, androgen-independent prostate cancer cells, and primary ovarian tumors. It acts as a key mediator in the genesis of ovarian cancer. Length = 328

>gnl|CDD|132952 cd06621, PKc_MAPKK_Pek1_like, Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

 Score = 81.3 bits (201), Expect = 3e-17
 Identities = 66/217 (30%), Positives = 96/217 (44%), Gaps = 28/217 (12%)

Query: 46  CEGGELLDRI---LAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           CEGG L D I   + K+  R  EK    +   +L+  +  H   ++HRD+KP N L    
Sbjct: 83  CEGGSL-DSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLT-- 139

Query: 103 KEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYIL 160
                +K  DFG+S + +          G+++Y+APE ++ K     SDVWS+G+    +
Sbjct: 140 -RKGQVKLCDFGVSGELVNSLAG--TFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEV 196

Query: 161 LCGRRPF-WDKTEDGIFKEVLR---NKPDFRRKPWPSI----SNSAKDFVKKLLVKDPRA 212
              R PF  +        E+L    N P+   K  P      S   KDF+K+ L KDP  
Sbjct: 197 AQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEPGNGIKWSEEFKDFIKQCLEKDPTR 256

Query: 213 RLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVK 249
           R T    L HPW++    A           NM +FV 
Sbjct: 257 RPTPWDMLEHPWIK----AQMKKK-----VNMAKFVA 284

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharomyces cerevisiae, and related proteins. Both fission yeast Pek1 and baker's yeast MKK2 are components of the cell integrity MAPK pathway. In fission yeast, Pek1 phosphorylates and activates the MAPK Pmk1/Spm1 and is regulated by the MAPKKK Mkh1. In baker's yeast, the pathway involves the MAPK Slt2, the MAPKKs MKK1 and MKK2, and the MAPKKK Bck1. The cell integrity MAPK cascade is activated by multiple stress conditions, and is essential in cell wall construction, morphogenesis, cytokinesis, and ion homeostasis. Length = 287

>gnl|CDD|173692 cd05601, STKc_CRIK, Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

 Score = 82.2 bits (203), Expect = 3e-17
 Identities = 60/208 (28%), Positives = 93/208 (44%), Gaps = 25/208 (12%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG+LL  +L + + ++ E  A   + +++      H  G VHRD+KPEN L         
Sbjct: 85  GGDLLS-LLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRT---GH 140

Query: 108 LKATDFGLSDFIKPGKKFQDI--VGSAYYVAPEVL-------KRKSGPESDVWSIGVITY 158
           +K  DFG +  +   K       VG+  Y+APEVL       K   G E D WS+GVI Y
Sbjct: 141 IKLADFGSAARLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAY 200

Query: 159 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 218
            ++ GR PF + T    +  ++  +   +    P +S+   D ++ LL    + RL    
Sbjct: 201 EMIYGRSPFHEGTSAKTYNNIMNFQRFLKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEG 259

Query: 219 ALSHPWVREGGDASEIPIDISVLNNMRQ 246
              HP+       S+I       NN+R 
Sbjct: 260 LCCHPFF------SKID-----WNNIRN 276

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome critical region protein TTC3 interacts with CRIK and inhibits CRIK-dependent neuronal differentiation and neurite extension. Length = 330

>gnl|CDD|140289 PTZ00263, PTZ00263, protein kinase A catalytic subunit; Provisional

 Score = 81.4 bits (201), Expect = 5e-17
 Identities = 57/200 (28%), Positives = 89/200 (44%), Gaps = 23/200 (11%)

Query: 83  HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 142
           H   +++RD+KPEN L  +      +K TDFG +  + P + F  + G+  Y+APEV++ 
Sbjct: 135 HSKDIIYRDLKPENLLLDN---KGHVKVTDFGFAKKV-PDRTFT-LCGTPEYLAPEVIQS 189

Query: 143 KS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDF 201
           K  G   D W++GV+ Y  + G  PF+D T   I++++L  +  F    W      A+D 
Sbjct: 190 KGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFPN--W--FDGRARDL 245

Query: 202 VKKLLVKDPRARLTA-----AQALSHPWVREG--------GDASEIPIDISVLNNMRQFV 248
           VK LL  D   RL       A   +HP+               + IP+ +    +   F 
Sbjct: 246 VKGLLQTDHTKRLGTLKGGVADVKNHPYFHGANWDKLYARYYPAPIPVRVKSPGDTSNFE 305

Query: 249 KYSRLKQFALRALASTLDDE 268
           KY       L  L +    E
Sbjct: 306 KYPDSPVDRLPPLTAAQQAE 325

Length = 329

>gnl|CDD|132968 cd06637, STKc_TNIK, Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

 Score = 80.5 bits (198), Expect = 5e-17
 Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 14/191 (7%)

Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +  C  G + D I   K +   E+  A + R++LR  +  H H ++HRD+K +N L    
Sbjct: 88  MEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL--- 144

Query: 103 KEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPE------SDVWSIGV 155
            E++ +K  DFG+S    +   +    +G+ Y++APEV+     P+      SD+WS+G+
Sbjct: 145 TENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGI 204

Query: 156 ITYILLCGRRPFWDKTEDGIFKEVLRN-KPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 214
               +  G  P  D         + RN  P  + K W   S   + F++  LVK+   R 
Sbjct: 205 TAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKW---SKKFQSFIESCLVKNHSQRP 261

Query: 215 TAAQALSHPWV 225
           T  Q + HP++
Sbjct: 262 TTEQLMKHPFI 272

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activates the c-Jun N-terminal kinase (JNK) pathway and plays a role in regulating the actin cytoskeleton. Length = 272

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 80.6 bits (199), Expect = 5e-17
 Identities = 56/178 (31%), Positives = 82/178 (46%), Gaps = 29/178 (16%)

Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH HG++HRD+KP+N L    K    LK  D GL   F  P K +   + + 
Sbjct: 118 QLLKGVAHCHKHGVMHRDLKPQNLLVDKQKG--LLKIADLGLGRAFSIPVKSYTHEIVTL 175

Query: 133 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTED----GIFKEV------- 179
           +Y APEVL          D+WS+G I   +   +  F   +E      IFK +       
Sbjct: 176 WYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQV 235

Query: 180 ------LRN-------KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 224
                 LR+       KP    +  P +S    D ++K+L  DP  R++A  AL+HP+
Sbjct: 236 WPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPY 293

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|185504 PTZ00184, PTZ00184, calmodulin; Provisional

 Score = 77.5 bits (191), Expect = 5e-17
 Identities = 46/152 (30%), Positives = 91/152 (59%), Gaps = 12/152 (7%)

Query: 261 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 320
           +A  L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D +
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59

Query: 321 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTG 377
            +G +DF EF+  TL   ++++ DSE+  ++   AF+ FD D +GFI+  ELR    + G
Sbjct: 60  GNGTIDFPEFL--TLMARKMKDTDSEE-EIKE--AFKVFDRDGNGFISAAELRHVMTNLG 114

Query: 378 LKGS---IDPLLEEADIDKDGRISLSEFRRLL 406
            K +   +D ++ EAD+D DG+I+  EF +++
Sbjct: 115 EKLTDEEVDEMIREADVDGDGQINYEEFVKMM 146

Length = 149

>gnl|CDD|173721 cd05632, STKc_GRK5, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

 Score = 80.4 bits (198), Expect = 5e-17
 Identities = 55/185 (29%), Positives = 86/185 (46%), Gaps = 9/185 (4%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG+L   I    +  + E+ A     ++L    + H    V+RD+KPEN L     +   
Sbjct: 84  GGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLD---DYGH 140

Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRP 166
           ++ +D GL+  I  G+  +  VG+  Y+APEVL  ++     D W +G + Y ++ G+ P
Sbjct: 141 IRISDLGLAVKIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSP 200

Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALS 221
           F  + E    +EV R   +         S  AK   K LL KDP+ RL      A +   
Sbjct: 201 FRGRKEKVKREEVDRRVLETEEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260

Query: 222 HPWVR 226
           HP+ R
Sbjct: 261 HPFFR 265

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with the membrane though an N-terminal PIP2 binding domain and also binds phospholipids via its C-terminus. GRK5 deficiency is associated with early Alzheimer's disease in humans and mouse models. GRK5 also plays a crucial role in the pathogenesis of sporadic Parkinson's disease. It participates in the regulation and desensitization of PDGFRbeta, a receptor tyrosine kinase involved in a variety of downstream cellular effects including cell growth, chemotaxis, apoptosis, and angiogenesis. GRK5 also regulates Toll-like receptor 4, which is involved in innate and adaptive immunity. Length = 285

>gnl|CDD|132975 cd06644, STKc_STK10_LOK, Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

 Score = 80.5 bits (198), Expect = 6e-17
 Identities = 59/194 (30%), Positives = 94/194 (48%), Gaps = 16/194 (8%)

Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           I  C GG + D I+ + D   TE    V+ RQML      H   ++HRD+K  N L    
Sbjct: 88  IEFCPGGAV-DAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLL--- 143

Query: 103 KEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVL---KRKSGP---ESDVWSIGV 155
             D  +K  DFG+S   +K  ++    +G+ Y++APEV+     K  P   ++D+WS+G+
Sbjct: 144 TLDGDIKLADFGVSAKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGI 203

Query: 156 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP--WPSISNSAKDFVKKLLVKDPRAR 213
               +     P  +     +  ++ +++P    +P  W   S   +DF+K  L K P  R
Sbjct: 204 TLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLSQPSKW---SMEFRDFLKTALDKHPETR 260

Query: 214 LTAAQALSHPWVRE 227
            +AAQ L HP+V  
Sbjct: 261 PSAAQLLEHPFVSS 274

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types. Length = 292

>gnl|CDD|132987 cd06656, STKc_PAK3, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

 Score = 80.5 bits (198), Expect = 6e-17
 Identities = 55/181 (30%), Positives = 94/181 (51%), Gaps = 9/181 (4%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG L D +    ++   E   A V R+ L+     H + ++HRD+K +N L      D S
Sbjct: 100 GGSLTDVV---TETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGM---DGS 153

Query: 108 LKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRR 165
           +K TDFG    I P + K   +VG+ Y++APEV+ RK+ GP+ D+WS+G++   ++ G  
Sbjct: 154 VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEP 213

Query: 166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           P+ ++        +  N     + P   +S   +DF+ + L  D   R +A + L HP++
Sbjct: 214 PYLNENPLRALYLIATNGTPELQNP-ERLSAVFRDFLNRCLEMDVDRRGSAKELLQHPFL 272

Query: 226 R 226
           +
Sbjct: 273 K 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the brain. It is implicated in neuronal plasticity, synapse formation, dendritic spine morphogenesis, cell cycle progression, neuronal migration, and apoptosis. Inactivating mutations in the PAK3 gene cause X-linked non-syndromic mental retardation, the severity of which depends on the site of the mutation. Length = 297

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 80.9 bits (200), Expect = 7e-17
 Identities = 64/244 (26%), Positives = 102/244 (41%), Gaps = 45/244 (18%)

Query: 31  MEIVLPLRKLRRIRLCEGGELLDRILA---KKDSRYTEKDAAVVVRQMLRVAAECHLHGL 87
           M+IV P      + L E  EL++  L    +     T+      + Q+L      H   +
Sbjct: 70  MDIVFP-GNFNELYLYE--ELMEADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANV 126

Query: 88  VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD-----IVGSAYYVAPEVLKR 142
           +HRD+KP N L  +   D  LK  DFGL+                 V + +Y APE++  
Sbjct: 127 LHRDLKPGNLLVNA---DCELKICDFGLARGFSENPGENAGFMTEYVATRWYRAPEIMLS 183

Query: 143 KSGPES--DVWSIGVITYILLCGRRPFWD-----------------KTEDGIFK------ 177
                   DVWS+G I   LL GR+P +                    E+ + +      
Sbjct: 184 FQSYTKAIDVWSVGCILAELL-GRKPVFKGKDYVDQLNQILQVLGTPDEETLSRIGSPKA 242

Query: 178 -EVLRNKPDFRRKPWPSI----SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 232
              +R+ P+  +KP+ SI    +  A D ++KLL  DP  R++  +AL HP++    D  
Sbjct: 243 QNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWHDPD 302

Query: 233 EIPI 236
           + P+
Sbjct: 303 DEPV 306

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|132986 cd06655, STKc_PAK2, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

 Score = 80.5 bits (198), Expect = 7e-17
 Identities = 55/181 (30%), Positives = 94/181 (51%), Gaps = 9/181 (4%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG L D +    ++   E   A V R+ L+     H + ++HRD+K +N L      D S
Sbjct: 100 GGSLTDVV---TETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGM---DGS 153

Query: 108 LKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRR 165
           +K TDFG    I P + K   +VG+ Y++APEV+ RK+ GP+ D+WS+G++   ++ G  
Sbjct: 154 VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEP 213

Query: 166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           P+ ++        +  N     + P   +S   +DF+ + L  D   R +A + L HP++
Sbjct: 214 PYLNENPLRALYLIATNGTPELQNP-EKLSPIFRDFLNRCLEMDVEKRGSAKELLQHPFL 272

Query: 226 R 226
           +
Sbjct: 273 K 273

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK2 plays a role in pro-apoptotic signaling. It is cleaved and activated by caspases leading to morphological changes during apoptosis. PAK2 is also activated in response to a variety of stresses including DNA damage, hyperosmolarity, serum starvation, and contact inhibition, and may play a role in coordinating the stress response. PAK2 also contributes to cancer cell invasion through a mechanism distinct from that of PAK1. Length = 296

>gnl|CDD|173681 cd05590, STKc_nPKC_eta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

 Score = 80.7 bits (199), Expect = 7e-17
 Identities = 57/188 (30%), Positives = 93/188 (49%), Gaps = 17/188 (9%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG+L+  I  +K  R+ E  A     ++       H  G+++RD+K +N L      +  
Sbjct: 80  GGDLMFHI--QKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLD---HEGH 134

Query: 108 LKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRR 165
            K  DFG+  + I  GK      G+  Y+APE+L+    GP  D W++GV+ Y +LCG  
Sbjct: 135 CKLADFGMCKEGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHA 194

Query: 166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA------AQA 219
           PF  + ED +F+ +L ++  +    W  +S  A D +K  + K+P  RL +         
Sbjct: 195 PFEAENEDDLFEAILNDEVVY--PTW--LSQDAVDILKAFMTKNPTMRLGSLTLGGEEAI 250

Query: 220 LSHPWVRE 227
           L HP+ +E
Sbjct: 251 LRHPFFKE 258

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signaling of cell-type specific differentiation. It is also expressed in pro-B cells and early-stage thymocytes, and acts as a key regulator in early B-cell development. PKC-eta increases glioblastoma multiforme (GBM) proliferation and resistance to radiation, and is being developed as a therapeutic target for the management of GBM. Length = 320

>gnl|CDD|132985 cd06654, STKc_PAK1, Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

 Score = 79.8 bits (196), Expect = 1e-16
 Identities = 54/181 (29%), Positives = 93/181 (51%), Gaps = 9/181 (4%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG L D +    ++   E   A V R+ L+     H + ++HRD+K +N L      D S
Sbjct: 101 GGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM---DGS 154

Query: 108 LKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRR 165
           +K TDFG    I P + K   +VG+ Y++APEV+ RK+ GP+ D+WS+G++   ++ G  
Sbjct: 155 VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 214

Query: 166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           P+ ++        +  N     + P   +S   +DF+ + L  D   R +A + L H ++
Sbjct: 215 PYLNENPLRALYLIATNGTPELQNP-EKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFL 273

Query: 226 R 226
           +
Sbjct: 274 K 274

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK1 is important in the regulation of many cellular processes including cytoskeletal dynamics, cell motility, growth, and proliferation. Although PAK1 has been regarded mainly as a cytosolic protein, recent reports indicate that PAK1 also exists in significant amounts in the nucleus, where it is involved in transcription modulation and in cell cycle regulatory events. PAK1 is also involved in transformation and tumorigenesis. Its overexpression, hyperactivation and increased nuclear accumulation is correlated to breast cancer invasiveness and progression. Nuclear accumulation is also linked to tamoxifen resistance in breast cancer cells. Length = 296

>gnl|CDD|173761 cd08221, STKc_Nek9, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

 Score = 79.0 bits (195), Expect = 1e-16
 Identities = 55/185 (29%), Positives = 90/185 (48%), Gaps = 18/185 (9%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKE 104
             GG L D+I+ +K   + E+     + Q++   +  H  G++HRD+K  N FL K    
Sbjct: 81  ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTK---- 136

Query: 105 DSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYIL 160
              +K  DFG+S     G ++   + +VG+ YY++PE+ +      +SD+W++G + Y L
Sbjct: 137 AGLIKLGDFGISK--ILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYEL 194

Query: 161 LCGRRPF-WDKTEDGIFKEVLRNKPDFRRKPWPSISNSA-KDFVKKLLVKDPRARLTAAQ 218
           L  +R F      + + K V  N       P  S+ +S     V  LL +DP  R TA +
Sbjct: 195 LTLKRTFDATNPLNLVVKIVQGN-----YTPVVSVYSSELISLVHSLLQQDPEKRPTADE 249

Query: 219 ALSHP 223
            L  P
Sbjct: 250 VLDQP 254

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associates with FACT (FAcilitates Chromatin Transcription) and modulates interphase progression. It also interacts with Nek6, and Nek7, during mitosis, resulting in their activation. Length = 256

>gnl|CDD|132991 cd06917, STKc_NAK1_like, Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

 Score = 79.0 bits (195), Expect = 1e-16
 Identities = 52/184 (28%), Positives = 91/184 (49%), Gaps = 11/184 (5%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
            EGG +  R L K      EK  +V++R++L      H  G++HRD+K  N L  +    
Sbjct: 84  AEGGSV--RTLMKA-GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNT--- 137

Query: 106 SSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLC 162
            ++K  DFG++    +   K    VG+ Y++APEV+   +    ++D+WS+G+  Y +  
Sbjct: 138 GNVKLCDFGVAALLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMAT 197

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           G  P+ D         + ++KP   R      S   ++FV   L ++P+ RL+A + L  
Sbjct: 198 GNPPYSDVDAFRAMMLIPKSKPP--RLEDNGYSKLLREFVAACLDEEPKERLSAEELLKS 255

Query: 223 PWVR 226
            W++
Sbjct: 256 KWIK 259

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of centrin, and phosphorylates substrates in a Cdc31p-dependent manner. Length = 277

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 80.1 bits (198), Expect = 2e-16
 Identities = 60/206 (29%), Positives = 88/206 (42%), Gaps = 53/206 (25%)

Query: 74  QMLRVAAEC---HLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 128
           QML     C   HLH  G++HRD+KP N + KS   D +LK  DFGL+            
Sbjct: 126 QML-----CGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPY 177

Query: 129 VGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDK------TED 173
           V + YY APEV+      E+ D+WS+G I   ++ G   F        W+K      T  
Sbjct: 178 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPS 237

Query: 174 GIFKEVL--------RNKPDFRRKPWPSI-----------------SNSAKDFVKKLLVK 208
             F   L         N+P +    +  +                 ++ A+D + K+LV 
Sbjct: 238 DEFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVI 297

Query: 209 DPRARLTAAQALSHPWVREGGDASEI 234
           DP  R++   AL HP++    D SE+
Sbjct: 298 DPEKRISVDDALQHPYINVWYDPSEV 323

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 79.9 bits (198), Expect = 2e-16
 Identities = 58/192 (30%), Positives = 88/192 (45%), Gaps = 38/192 (19%)

Query: 71  VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ---- 126
           ++ Q+L+     H   ++HRD+KP N L  S   D  +K  DFGL+  +   ++      
Sbjct: 112 IMYQLLKALKYIHSGNVIHRDLKPSNILLNS---DCRVKLADFGLARSLSELEENPENPV 168

Query: 127 --DIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF--------------- 167
             D V + +Y APE+L    +     D+WS+G I   +L G+  F               
Sbjct: 169 LTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEV 228

Query: 168 -WDKTEDGI------FKE-VLRNKPDFRRKP----WPSISNSAKDFVKKLLVKDPRARLT 215
               + + I      F   +L + P   RKP     P  S+ A D +KKLLV +P  RLT
Sbjct: 229 IGPPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLT 288

Query: 216 AAQALSHPWVRE 227
           A +AL HP+V +
Sbjct: 289 AEEALEHPYVAQ 300

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|173727 cd06613, STKc_MAP4K3_like, Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

 Score = 78.5 bits (194), Expect = 2e-16
 Identities = 64/190 (33%), Positives = 89/190 (46%), Gaps = 22/190 (11%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
           C GG L D I        +E   A V R+ L+  A  H  G +HRD+K  N L     ED
Sbjct: 82  CGGGSLQD-IYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILL---TED 137

Query: 106 SSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVL--KRKSGPES--DVWSIGVITYIL 160
             +K  DFG+S  +     K +  +G+ Y++APEV   +RK G +   D+W++G IT I 
Sbjct: 138 GDVKLADFGVSAQLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALG-ITAIE 196

Query: 161 LC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK------DFVKKLLVKDPRAR 213
           L   + P +D          L         P P + +  K      DF+KK L KDP+ R
Sbjct: 197 LAELQPPMFDLHP----MRALFLISKSNFPP-PKLKDKEKWSPVFHDFIKKCLTKDPKKR 251

Query: 214 LTAAQALSHP 223
            TA + L HP
Sbjct: 252 PTATKLLQHP 261

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K1, also called haematopoietic progenitor kinase 1 (HPK1), is a hematopoietic-specific STK involved in many cellular signaling cascades including MAPK, antigen receptor, apoptosis, growth factor, and cytokine signaling. It participates in the regulation of T cell receptor signaling and T cell-mediated immune responses. MAP4K2 was referred to as germinal center (GC) kinase because of its preferred location in GC B cells. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. It is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). Length = 262

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 78.7 bits (194), Expect = 2e-16
 Identities = 54/181 (29%), Positives = 88/181 (48%), Gaps = 35/181 (19%)

Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD-FIKPGKKFQDIVGSA 132
           Q+L+  A CH H ++HRD+KP+N L      + ++K  DFGL+  F  P + +   V + 
Sbjct: 108 QLLQGLAFCHSHRVLHRDLKPQNLLI---NTEGAIKLADFGLARAFGVPVRTYTHEVVTL 164

Query: 133 YYVAPEVL---KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLRN------ 182
           +Y APE+L   K  S    D+WS+G I   ++  R  F   +E D +F+ + R       
Sbjct: 165 WYRAPEILLGCKYYSTA-VDIWSLGCIFAEMVTRRALFPGDSEIDQLFR-IFRTLGTPDE 222

Query: 183 ------------KPDF---RRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHP 223
                       KP F    R+ +    P +    +D + ++L  DP  R++A  AL+HP
Sbjct: 223 VVWPGVTSLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHP 282

Query: 224 W 224
           +
Sbjct: 283 F 283

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 78.7 bits (194), Expect = 2e-16
 Identities = 56/182 (30%), Positives = 83/182 (45%), Gaps = 25/182 (13%)

Query: 58  KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 117
           +   R+ E+       Q+L   A  H  G++HRD+K +N L  +   D   K +DFG+S 
Sbjct: 100 RTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDA---DGICKISDFGIS- 155

Query: 118 FIKPGKKFQDIV---------GSAYYVAPEVLKRKSGPES---DVWSIGVITYILLCGRR 165
                KK  DI          GS +++APEV+   S   S   D+WS+G +   +  GRR
Sbjct: 156 -----KKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRR 210

Query: 166 PFWDKTE--DGIFK-EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           P W   E    +FK    R+ P        ++S  A DF+      +P  R TA + L H
Sbjct: 211 P-WSDEEAIAAMFKLGNKRSAPPIPPDVSMNLSPVALDFLNACFTINPDNRPTARELLQH 269

Query: 223 PW 224
           P+
Sbjct: 270 PF 271

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|173668 cd05577, STKc_GRK, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

 Score = 78.7 bits (194), Expect = 2e-16
 Identities = 50/152 (32%), Positives = 79/152 (51%), Gaps = 11/152 (7%)

Query: 83  HLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL 140
           HLH   +V+RD+KPEN L     +  +++ +D GL+  +K GKK +   G+  Y+APEVL
Sbjct: 110 HLHQRRIVYRDLKPENVLLD---DHGNVRISDLGLAVELKGGKKIKGRAGTPGYMAPEVL 166

Query: 141 KRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK 199
           + +    S D +++G   Y ++ GR PF  + E    +E+ R   +   +     S  AK
Sbjct: 167 QGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFSPEAK 226

Query: 200 DFVKKLLVKDPRARL-----TAAQALSHPWVR 226
           D  + LL KDP  RL     +A +   HP  +
Sbjct: 227 DLCEALLQKDPEKRLGCRGGSADEVREHPLFK 258

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of G protein signaling) homology (RH) domain and several motifs. The C-terminus diverges among different groups of GRKs. There are seven types of GRKs, named GRK1 to GRK7. They are subdivided into three main groups: visual (GRK1/7); beta-adrenergic receptor kinases (GRK2/3); and GRK4-like (GRK4/5/6). Expression of GRK2/3/5/6 is widespread while GRK1/4/7 show a limited tissue distribution. The substrate spectrum of the widely expressed GRKs partially overlaps. GRKs play important roles in the cardiovascular, immune, respiratory, skeletal, and nervous systems. Length = 277

>gnl|CDD|132967 cd06636, STKc_MAP4K4_6, Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

 Score = 78.5 bits (193), Expect = 2e-16
 Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 14/191 (7%)

Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +  C  G + D +   K +   E   A + R++LR  A  H H ++HRD+K +N L    
Sbjct: 98  MEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLL--- 154

Query: 103 KEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPE------SDVWSIGV 155
            E++ +K  DFG+S    +   +    +G+ Y++APEV+     P+      SD+WS+G+
Sbjct: 155 TENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGI 214

Query: 156 ITYILLCGRRPFWDKTEDGIFKEVLRN-KPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 214
               +  G  P  D         + RN  P  + K W   S    DF++  LVK+  +R 
Sbjct: 215 TAIEMAEGAPPLCDMHPMRALFLIPRNPPPKLKSKKW---SKKFIDFIEGCLVKNYLSRP 271

Query: 215 TAAQALSHPWV 225
           +  Q L HP++
Sbjct: 272 STEQLLKHPFI 282

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K4 is also called Nck Interacting kinase (NIK). It facilitates the activation of the MAPKs, extracellular signal-regulated kinase (ERK) 1, ERK2, and c-Jun N-terminal kinase (JNK), by phosphorylating and activating MEKK1. MAP4K4 plays a role in tumor necrosis factor (TNF) alpha-induced insulin resistance. MAP4K4 silencing in skeletal muscle cells from type II diabetic patients restores insulin-mediated glucose uptake. MAP4K4, through JNK, also plays a broad role in cell motility, which impacts inflammation, homeostasis, as well as the invasion and spread of cancer. MAP4K4 is found to be highly expressed in most tumor cell lines relative to normal tissue. MAP4K6 (also called MINK for Misshapen/NIKs-related kinase) is activated after Ras induction and mediates activation of p38 MAPK. MAP4K6 plays a role in cell cycle arrest, cytoskeleton organization, cell adhesion, and cell motility. Length = 282

>gnl|CDD|140293 PTZ00267, PTZ00267, NIMA-related protein kinase; Provisional

 Score = 80.4 bits (198), Expect = 3e-16
 Identities = 60/187 (32%), Positives = 93/187 (49%), Gaps = 28/187 (14%)

Query: 48  GGELLDRILAKKDSR--YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKE 104
           GG+L  +I  +      + E +  ++  Q++    E H   ++HRD+K  N FL  +   
Sbjct: 149 GGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTG-- 206

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIV---------GSAYYVAPEVLKRKS-GPESDVWSIG 154
              +K  DFG S      K++ D V         G+ YY+APE+ +RK    ++D+WS+G
Sbjct: 207 --IIKLGDFGFS------KQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLG 258

Query: 155 VITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP-SISNSAKDFVKKLLVKDPRAR 213
           VI Y LL   RPF   ++  I ++VL  K D    P+P  +S+  K  +  LL K+P  R
Sbjct: 259 VILYELLTLHRPFKGPSQREIMQQVLYGKYD----PFPCPVSSGMKALLDPLLSKNPALR 314

Query: 214 LTAAQAL 220
            T  Q L
Sbjct: 315 PTTQQLL 321

Length = 478

>gnl|CDD|132953 cd06622, PKc_MAPKK_PBS2_like, Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

 Score = 78.0 bits (192), Expect = 4e-16
 Identities = 54/159 (33%), Positives = 79/159 (49%), Gaps = 21/159 (13%)

Query: 85  HGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRK 143
           H ++HRD+KP N L     +   +K  DFG+S + +    K    +G   Y+APE +K  
Sbjct: 122 HNIIHRDVKPTNVLVNGNGQ---VKLCDFGVSGNLVASLAKTN--IGCQSYMAPERIK-S 175

Query: 144 SGP--------ESDVWSIGVITYILLCGRRPFWDKTEDGIFKE---VLRNKPDFRRKPWP 192
            GP        +SDVWS+G+    +  GR P+  +T   IF +   ++   P     P  
Sbjct: 176 GGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDPP--TLP-S 232

Query: 193 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 231
             S+ A+DFV K L K P  R T AQ L HPW+ +  +A
Sbjct: 233 GYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKNA 271

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Polymyxin B resistance protein 2 (PBS2) from Saccharomyces cerevisiae, Wis1 from Schizosaccharomyces pombe, and related proteins. PBS2 and Wis1 are components of stress-activated MAPK cascades in budding and fission yeast, respectively. PBS2 is the specific activator of the MAPK Hog1, which plays a central role in the response of budding yeast to stress including exposure to arsenite and hyperosmotic environments. Wis1 phosphorylates and activates the MAPK Sty1 (also called Spc1 or Phh1), which stimulates a transcriptional response to a wide range of cellular insults through the bZip transcription factors Atf1, Pcr1, and Pap1. Length = 286

>gnl|CDD|173683 cd05592, STKc_nPKC_theta_delta, Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

 Score = 78.3 bits (193), Expect = 4e-16
 Identities = 61/183 (33%), Positives = 92/183 (50%), Gaps = 12/183 (6%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG+L+  I +    R+ E  A     +++      H  G+++RD+K +N L     +D  
Sbjct: 80  GGDLMFHIQSSG--RFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLD---KDGH 134

Query: 108 LKATDFGLSDF-IKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRR 165
           +K  DFG+    +    K     G+  Y+APE+LK +   ES D WS GV+ Y +L G+ 
Sbjct: 135 IKIADFGMCKENMNGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQS 194

Query: 166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-TAAQALSHPW 224
           PF  + ED +F  +L ++P F R  W  IS  AKD + KL  +DP  RL        HP+
Sbjct: 195 PFHGEDEDELFDSILNDRPHFPR--W--ISKEAKDCLSKLFERDPTKRLGVDGDIRQHPF 250

Query: 225 VRE 227
            R 
Sbjct: 251 FRG 253

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. Length = 316

>gnl|CDD|173682 cd05591, STKc_nPKC_epsilon, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

 Score = 78.0 bits (192), Expect = 6e-16
 Identities = 53/189 (28%), Positives = 94/189 (49%), Gaps = 18/189 (9%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG+L+ +I  ++  ++ E  +     ++       H HG+++RD+K +N L  +   +  
Sbjct: 80  GGDLMFQI--QRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDA---EGH 134

Query: 108 LKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRR 165
            K  DFG+  + I  G       G+  Y+APE+L+  + GP  D W++GV+ Y ++ G+ 
Sbjct: 135 CKLADFGMCKEGILNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQP 194

Query: 166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL--TAAQALS-- 221
           PF    ED +F+ +L +  D     W  +S  A   +K  + K+P  RL   A+Q     
Sbjct: 195 PFEADNEDDLFESILHD--DVLYPVW--LSKEAVSILKAFMTKNPNKRLGCVASQGGEDA 250

Query: 222 ---HPWVRE 227
              HP+ +E
Sbjct: 251 IKQHPFFKE 259

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to neoplastic transformation depending on the cell type. It contributes to oncogenesis by inducing disordered cell growth and inhibiting cell death. It also plays a role in tumor invasion and metastasis. PKC-epsilon has also been found to confer cardioprotection against ischemia and reperfusion-mediated damage. Other cellular functions include the regulation of gene expression, cell adhesion, and cell motility. Length = 321

>gnl|CDD|173719 cd05630, STKc_GRK6, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

 Score = 77.0 bits (189), Expect = 9e-16
 Identities = 52/191 (27%), Positives = 92/191 (48%), Gaps = 9/191 (4%)

Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + L  GG+L   I    ++ + E  A     ++     + H   +V+RD+KPEN L    
Sbjct: 79  LTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLD-- 136

Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILL 161
            +   ++ +D GL+  +  G+  +  VG+  Y+APEV+K +    S D W++G + Y ++
Sbjct: 137 -DHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMI 195

Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TA 216
            G+ PF  + +    +EV R   + + +     S  A+   K LL KDP+ RL      A
Sbjct: 196 AGQSPFQQRKKKIKREEVERLVKEVQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGA 255

Query: 217 AQALSHPWVRE 227
            +   HP  ++
Sbjct: 256 REVKEHPLFKQ 266

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK6 plays important roles in the regulation of dopamine, M3 muscarinic, opioid, and chemokine receptor signaling. It also plays maladaptive roles in addiction and Parkinson's disease. GRK6-deficient mice exhibit altered dopamine receptor regulation, decreased lymphocyte chemotaxis, and increased acute inflammation and neutrophil chemotaxis. Length = 285

>gnl|CDD|132974 cd06643, STKc_SLK, Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

 Score = 76.2 bits (187), Expect = 2e-15
 Identities = 57/192 (29%), Positives = 94/192 (48%), Gaps = 16/192 (8%)

Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           I  C GG + D ++ + +   TE    VV +Q L      H + ++HRD+K  N LF   
Sbjct: 81  IEFCAGGAV-DAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTL- 138

Query: 103 KEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVL------KRKSGPESDVWSIGV 155
             D  +K  DFG+S    +  ++    +G+ Y++APEV+       R    ++DVWS+G+
Sbjct: 139 --DGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGI 196

Query: 156 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP--WPSISNSAKDFVKKLLVKDPRAR 213
               +     P  +     +  ++ +++P    +P  W   S+  KDF+KK L K+  AR
Sbjct: 197 TLIEMAQIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---SSEFKDFLKKCLEKNVDAR 253

Query: 214 LTAAQALSHPWV 225
            T  Q L HP+V
Sbjct: 254 WTTTQLLQHPFV 265

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration. Length = 282

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 75.9 bits (187), Expect = 2e-15
 Identities = 55/197 (27%), Positives = 93/197 (47%), Gaps = 35/197 (17%)

Query: 60  DSRYTEKDAAVV---VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 116
           DS   + D  +V   + Q+L+  A CH H ++HRD+KP+N L     ++  LK  DFGL+
Sbjct: 90  DSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLI---NKNGELKLADFGLA 146

Query: 117 -DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTE- 172
             F  P + +   V + +Y  P+VL       +  D+WS G I   L    RP +   + 
Sbjct: 147 RAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV 206

Query: 173 ----DGIFKEV----------LRNKPDFRRKP-------W----PSISNSAKDFVKKLLV 207
                 IF+ +          +   PD++  P            P ++++ +D ++ LLV
Sbjct: 207 DDQLKRIFRLLGTPTEESWPGVSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLV 266

Query: 208 KDPRARLTAAQALSHPW 224
            +P  R++A +AL HP+
Sbjct: 267 CNPVQRISAEEALQHPY 283

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|132949 cd06618, PKc_MKK7, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

 Score = 75.9 bits (187), Expect = 3e-15
 Identities = 48/154 (31%), Positives = 74/154 (48%), Gaps = 22/154 (14%)

Query: 85  HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 143
           HG++HRD+KP N L        ++K  DFG+S  +   K      G A Y+APE +    
Sbjct: 134 HGVIHRDVKPSNILLD---ASGNVKLCDFGISGRLVDSKAKTRSAGCAAYMAPERIDPPD 190

Query: 144 SGPE----SDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDFRRKPWPSISNSA 198
             P+    +DVWS+G+    L  G+ P+ + KTE  +  ++L+ +P       PS+  + 
Sbjct: 191 PNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEP-------PSLPPNE 243

Query: 199 ------KDFVKKLLVKDPRARLTAAQALSHPWVR 226
                   FV   L KD R R    + L HP++R
Sbjct: 244 GFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIR 277

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates its downstream target, c-Jun N-terminal kinase (JNK), on specific threonine and tyrosine residues. Although MKK7 is capable of dual phosphorylation, it prefers to phosphorylate the threonine residue of JNK. Thus, optimal activation of JNK requires both MKK4 (not included in this subfamily) and MKK7. MKK7 is primarily activated by cytokines. MKK7 is essential for liver formation during embryogenesis. It plays roles in G2/M cell cycle arrest and cell growth. In addition, it is involved in the control of programmed cell death, which is crucial in oncogenesis, cancer chemoresistance, and antagonism to TNFalpha-induced killing, through its inhibition by Gadd45beta and the subsequent suppression of the JNK cascade. Length = 296

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 76.1 bits (187), Expect = 3e-15
 Identities = 60/202 (29%), Positives = 85/202 (42%), Gaps = 34/202 (16%)

Query: 63  YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 122
            +E     +V QML      H  G++HRD+KP N    +  ED  LK  DFGL+      
Sbjct: 114 LSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNL---AVNEDCELKILDFGLAR--HAD 168

Query: 123 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRR--------------- 165
            +    V + +Y APEV+          D+WS+G I   +L G+                
Sbjct: 169 AEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQIL 228

Query: 166 --------PFWDKTEDGIFKEVLRNKPDFRRKP----WPSISNSAKDFVKKLLVKDPRAR 213
                    F  K ED   K  +++ P + RK     +P  S  A D ++K+L  D   R
Sbjct: 229 KVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKR 288

Query: 214 LTAAQALSHPWVREGGDASEIP 235
           LTA +AL HP+     DA E  
Sbjct: 289 LTATEALEHPYFDSFRDADEET 310

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 75.8 bits (187), Expect = 4e-15
 Identities = 52/196 (26%), Positives = 88/196 (44%), Gaps = 36/196 (18%)

Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP----GKKFQDIV 129
           Q+LR     H   ++HRD+KP N L  +      LK  DFGL+    P         + V
Sbjct: 114 QILRGLKYIHSANVLHRDLKPSNLLLNTN---CDLKICDFGLARIADPEHDHTGFLTEYV 170

Query: 130 GSAYYVAPEV-LKRKSGPES-DVWSIGVITYILLCGRRPFWDK----------------T 171
            + +Y APE+ L  K   ++ D+WS+G I   +L  R  F  K                +
Sbjct: 171 ATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPS 230

Query: 172 EDGIF-------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           ++ +        +  +++ P   + PW    P+    A D + K+L  +P  R+T  +AL
Sbjct: 231 QEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEAL 290

Query: 221 SHPWVREGGDASEIPI 236
           +HP++ +  D S+ P+
Sbjct: 291 AHPYLEQYHDPSDEPV 306

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|132956 cd06625, STKc_MEKK3_like, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 74.5 bits (183), Expect = 5e-15
 Identities = 54/185 (29%), Positives = 95/185 (51%), Gaps = 16/185 (8%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG + D++  K     TE       RQ+L      H + +VHRD+K  N L  SA    +
Sbjct: 88  GGSVKDQL--KAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSA---GN 142

Query: 108 LKATDFGLSDFIKP----GKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC 162
           +K  DFG S  ++     G   + + G+ Y+++PEV+  +  G ++DVWS+G  T + + 
Sbjct: 143 VKLGDFGASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGC-TVVEML 201

Query: 163 GRRPFWDKTED--GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
             +P W + E    IFK  +  +P   + P   +S  A++F+++  V++ + R +A + L
Sbjct: 202 TEKPPWAEFEAMAAIFK--IATQPTNPQLP-SHVSPDARNFLRRTFVENAKKRPSAEELL 258

Query: 221 SHPWV 225
            H +V
Sbjct: 259 RHFFV 263

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 263

>gnl|CDD|173760 cd08220, STKc_Nek8, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

 Score = 74.1 bits (182), Expect = 6e-15
 Identities = 45/182 (24%), Positives = 78/182 (42%), Gaps = 10/182 (5%)

Query: 47  EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 106
            GG L + I  + +S   E        Q+L      H   ++HRD+K +N L    K   
Sbjct: 82  PGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLD--KHKM 139

Query: 107 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRR 165
            +K  DFG+S  +    K   +VG+  Y++PE+ + K    +SD+W++G + Y L   +R
Sbjct: 140 VVKIGDFGISKILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKR 199

Query: 166 PFWDKTEDGIFKEVLRNK--PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 223
            F       +  +++     P   R      S   +  +  +L  DP  R   +Q ++ P
Sbjct: 200 AFEAANLPALVLKIMSGTFAPISDR-----YSPDLRQLILSMLNLDPSKRPQLSQIMAQP 254

Query: 224 WV 225
             
Sbjct: 255 IC 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with a rare form of juvenile renal cystic disease, nephronophthisis type 9. It has been suggested that a defect in the ciliary localization of Nek8 contributes to the development of cysts manifested by these diseases. Length = 256

>gnl|CDD|173709 cd05619, STKc_nPKC_theta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

 Score = 74.2 bits (182), Expect = 9e-15
 Identities = 49/148 (33%), Positives = 77/148 (52%), Gaps = 10/148 (6%)

Query: 83  HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVL- 140
           H  G+V+RD+K +N L  +   D  +K  DFG+  + +    K     G+  Y+APE+L 
Sbjct: 113 HSKGIVYRDLKLDNILLDT---DGHIKIADFGMCKENMLGDAKTCTFCGTPDYIAPEILL 169

Query: 141 KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 200
            +K     D WS GV+ Y +L G+ PF    E+ +F+ +  + P + R  W  ++  AKD
Sbjct: 170 GQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYPR--W--LTREAKD 225

Query: 201 FVKKLLVKDPRARL-TAAQALSHPWVRE 227
            + KL V++P  RL        HP+ RE
Sbjct: 226 ILVKLFVREPERRLGVKGDIRQHPFFRE 253

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in several aspects of T-cell biology. Although T-cells also express other PKC isoforms, PKC-theta is unique in that upon antigen stimulation, it is translocated to the plasma membrane at the immunological synapse, where it mediates signals essential for T-cell activation. It is essential for TCR-induced proliferation, cytokine production, T-cell survival, and the differentiation and effector function of T-helper (Th) cells, particularly Th2 and Th17. PKC-theta is being developed as a therapeutic target for Th2-mediated allergic inflammation and Th17-mediated autoimmune diseases. Length = 316

>gnl|CDD|173687 cd05596, STKc_ROCK, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

 Score = 74.8 bits (184), Expect = 9e-15
 Identities = 43/133 (32%), Positives = 61/133 (45%), Gaps = 14/133 (10%)

Query: 83  HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ----DIVGSAYYVAPE 138
           H  G +HRD+KP+N L         LK  DFG    +K            VG+  Y++PE
Sbjct: 159 HSMGFIHRDVKPDNMLLDK---SGHLKLADFGTC--MKMDANGMVRCDTAVGTPDYISPE 213

Query: 139 VLKRKS-----GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 193
           VLK +      G E D WS+GV  Y +L G  PF+  +  G + +++ +K          
Sbjct: 214 VLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPDDIE 273

Query: 194 ISNSAKDFVKKLL 206
           IS  AKD +   L
Sbjct: 274 ISKQAKDLICAFL 286

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via interaction with Rho GTPases and is involved in many cellular functions including contraction, adhesion, migration, motility, proliferation, and apoptosis. The ROCK subfamily consists of two isoforms, ROCK1 and ROCK2, which may be functionally redundant in some systems, but exhibit different tissue distributions. Both isoforms are ubiquitously expressed in most tissues, but ROCK2 is more prominent in brain and skeletal muscle while ROCK1 is more pronounced in the liver, testes, and kidney. Studies in knockout mice result in different phenotypes, suggesting that the two isoforms do not compensate for each other during embryonic development. Length = 370

>gnl|CDD|173693 cd05602, STKc_SGK1, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

 Score = 73.9 bits (181), Expect = 1e-14
 Identities = 54/171 (31%), Positives = 86/171 (50%), Gaps = 11/171 (6%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGEL   +  +++  + E  A     ++       H   +V+RD+KPEN L  S      
Sbjct: 80  GGELFYHL--QRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDS---QGH 134

Query: 108 LKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRR 165
           +  TDFGL  + I+         G+  Y+APEVL ++    + D W +G + Y +L G  
Sbjct: 135 IVLTDFGLCKENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLP 194

Query: 166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA 216
           PF+ +    ++  +L NKP  + K  P+I+NSA+  ++ LL KD   RL A
Sbjct: 195 PFYSRNTAEMYDNIL-NKP-LQLK--PNITNSARHLLEGLLQKDRTKRLGA 241

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt sensitivity, memory consolidation, and cardiac repolarization. A common SGK1 variant is associated with increased blood pressure and body weight. SGK1 may also contribute to tumor growth, neurodegeneration, fibrosing disease, and ischemia. Length = 325

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 73.2 bits (180), Expect = 2e-14
 Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 33/181 (18%)

Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSA 132
           Q+LR    CH H ++HRD+KPEN L   +     +K  DFG +  +  PG+ + D V + 
Sbjct: 108 QILRGIEFCHSHNIIHRDIKPENILVSQSG---VVKLCDFGFARTLAAPGEVYTDYVATR 164

Query: 133 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF-WDKTEDGIFKEVL-------RN 182
           +Y APE+L    K G   D+W++G +   +L G   F  D   D ++  +        R+
Sbjct: 165 WYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRH 224

Query: 183 KPDFRRKP-------------------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 223
           +  F++ P                   +P +S    D  K+ L  DP  R +++Q L H 
Sbjct: 225 QEIFQKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHE 284

Query: 224 W 224
           +
Sbjct: 285 F 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173666 cd05575, STKc_SGK, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

 Score = 73.7 bits (181), Expect = 2e-14
 Identities = 51/138 (36%), Positives = 76/138 (55%), Gaps = 11/138 (7%)

Query: 83  HLHGL--VHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEV 139
           +LH L  ++RD+KPEN L  S      +  TDFGL  + I+  K      G+  Y+APEV
Sbjct: 111 YLHSLNIIYRDLKPENILLDS---QGHVVLTDFGLCKEGIEHSKTTSTFCGTPEYLAPEV 167

Query: 140 LKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 198
           L+++    + D W +G + Y +L G  PF+ +    ++  +L NKP  R KP  +IS SA
Sbjct: 168 LRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNIL-NKP-LRLKP--NISVSA 223

Query: 199 KDFVKKLLVKDPRARLTA 216
           +  ++ LL KD   RL A
Sbjct: 224 RHLLEGLLQKDRTKRLGA 241

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell proliferation, and apoptosis. Length = 323

>gnl|CDD|240344 PTZ00283, PTZ00283, serine/threonine protein kinase; Provisional

 Score = 74.9 bits (184), Expect = 2e-14
 Identities = 58/176 (32%), Positives = 90/176 (51%), Gaps = 20/176 (11%)

Query: 57  AKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 116
           AK +  + E +A ++  Q+L      H   ++HRD+K  N L  S   +  +K  DFG S
Sbjct: 134 AKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCS---NGLVKLGDFGFS 190

Query: 117 DFIKP------GKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWD 169
                      G+ F    G+ YYVAPE+ +RK    ++D++S+GV+ Y LL  +RPF  
Sbjct: 191 KMYAATVSDDVGRTF---CGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPF-- 245

Query: 170 KTEDGI-FKEVLRNKPDFRRKPWP-SISNSAKDFVKKLLVKDPRARLTAAQALSHP 223
              DG   +EV+      R  P P SIS   ++ V  LL  DP+ R ++++ L+ P
Sbjct: 246 ---DGENMEEVMHKTLAGRYDPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNMP 298

Length = 496

>gnl|CDD|132938 cd06607, STKc_TAO, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

 Score = 73.3 bits (180), Expect = 2e-14
 Identities = 52/168 (30%), Positives = 78/168 (46%), Gaps = 16/168 (9%)

Query: 65  EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 124
           E + A +    L+  A  H H  +HRD+K  N L     E  ++K  DFG +  + P   
Sbjct: 114 EVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLT---EPGTVKLADFGSASLVSPANS 170

Query: 125 FQDIVGSAYYVAPEV-LKRKSGP---ESDVWSIGVITYILLCGRRP--FWDKTEDGIFKE 178
           F   VG+ Y++APEV L    G    + DVWS+G IT I L  R+P  F       ++  
Sbjct: 171 F---VGTPYWMAPEVILAMDEGQYDGKVDVWSLG-ITCIELAERKPPLFNMNAMSALYHI 226

Query: 179 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 226
              + P      W   S+  ++FV   L K P+ R ++ + L H +V 
Sbjct: 227 AQNDSPTLSSNDW---SDYFRNFVDSCLQKIPQDRPSSEELLKHRFVL 271

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily members, named TAO1, TAO2, and TAO3. Length = 307

>gnl|CDD|173713 cd05624, STKc_MRCK_beta, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

 Score = 73.5 bits (180), Expect = 2e-14
 Identities = 52/176 (29%), Positives = 88/176 (50%), Gaps = 19/176 (10%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG+LL  +L+K + R  E  A   + +M+      H    VHRD+KP+N L      +  
Sbjct: 85  GGDLLT-LLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDM---NGH 140

Query: 108 LKATDFGLSDFIKPGKKFQD--IVGSAYYVAPEVLKR------KSGPESDVWSIGVITYI 159
           ++  DFG    +      Q    VG+  Y++PE+L+       K GPE D WS+GV  Y 
Sbjct: 141 IRLADFGSCLKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYE 200

Query: 160 LLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS----ISNSAKDFVKKLLVKDPR 211
           +L G  PF+ ++    + +++ ++  F+   +PS    +S  AKD +++L+    R
Sbjct: 201 MLYGETPFYAESLVETYGKIMNHEERFQ---FPSHITDVSEEAKDLIQRLICSRER 253

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues. Length = 331

>gnl|CDD|132984 cd06653, STKc_MEKK3_like_1, Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

 Score = 72.4 bits (177), Expect = 2e-14
 Identities = 58/185 (31%), Positives = 97/185 (52%), Gaps = 17/185 (9%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG + D++  K     TE       RQ+L+  +  H + +VHRD+K  N L  SA    +
Sbjct: 90  GGSIKDQL--KAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSA---GN 144

Query: 108 LKATDFGLSDFIK----PGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC 162
           +K  DFG S  I+     G   + + G+ Y+++PEV+  +  G ++DVWS+   T + + 
Sbjct: 145 VKLGDFGASKRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVAC-TVVEML 203

Query: 163 GRRPFWDKTE--DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
             +P W + E    IFK  +  +P     P   +S++ +DF+K++ V++ R R TA   L
Sbjct: 204 TEKPPWAEYEAMAAIFK--IATQPTKPMLP-DGVSDACRDFLKQIFVEEKR-RPTAEFLL 259

Query: 221 SHPWV 225
            HP+V
Sbjct: 260 RHPFV 264

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK2 and MEKK3 activate MEK5 (also called MKK5), which activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. MEKK2 and MEKK3 can also activate the MAPKs, c-Jun N-terminal kinase (JNK) and p38, through their respective MAPKKs. Length = 264

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 73.1 bits (179), Expect = 3e-14
 Identities = 58/206 (28%), Positives = 94/206 (45%), Gaps = 34/206 (16%)

Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + +E     +V QML+     H  G++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 111 KHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNL---AVNEDCELKILDFGLAR- 166

Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGR------------ 164
            +   +    V + +Y APEV+          D+WS+G I   +L G+            
Sbjct: 167 -QTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQL 225

Query: 165 -----------RPFWDKTEDGIFKEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKD 209
                      + F  K +    K  ++  P FR+K +    P+ +  A + ++K+LV D
Sbjct: 226 MEIMKVTGTPSKEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLD 285

Query: 210 PRARLTAAQALSHPWVREGGDASEIP 235
             +R+TAA+AL+HP+  E  D  +  
Sbjct: 286 AESRITAAEALAHPYFEEFHDPEDET 311

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 72.3 bits (178), Expect = 3e-14
 Identities = 55/180 (30%), Positives = 81/180 (45%), Gaps = 31/180 (17%)

Query: 72  VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 131
           + Q+L+     H +G+ HRD+KPEN L K    D  LK  DFG    I     + + + +
Sbjct: 106 MYQLLKSLDHMHRNGIFHRDIKPENILIK----DDILKLADFGSCRGIYSKPPYTEYIST 161

Query: 132 AYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK--EVL---RNK 183
            +Y APE L      GP+ D+W++G + + +L     F    E D I K  +VL     +
Sbjct: 162 RWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAE 221

Query: 184 PDFRRKPW-------------------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 224
              + +                     P+ S    D +KKLL  DP  R+TA QAL HP+
Sbjct: 222 VLKKFRKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPY 281

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|88519 cd05618, STKc_aPKC_iota, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

 Score = 72.8 bits (178), Expect = 4e-14
 Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 36/206 (17%)

Query: 43  IRLCEGGELL-----DRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 97
           I    GG+L+      R L ++ +R+   + ++ +  +       H  G+++RD+K +N 
Sbjct: 75  IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL-------HERGIIYRDLKLDNV 127

Query: 98  LFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGV 155
           L  S   +  +K TD+G+  + ++PG       G+  Y+APE+L+ +  G   D W++GV
Sbjct: 128 LLDS---EGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGV 184

Query: 156 ITYILLCGRRPF---------WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 206
           + + ++ GR PF            TED +F+ +L  +    R    S+S  A   +K  L
Sbjct: 185 LMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKAASVLKSFL 240

Query: 207 VKDPRARLTA------AQALSHPWVR 226
            KDP+ RL        A    HP+ R
Sbjct: 241 NKDPKERLGCHPQTGFADIQGHPFFR 266

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target of tumor-specific gene amplification in many human cancers, and has been identified as a human oncogene. In addition to its role in transformed growth, PKC-iota also promotes invasion, chemoresistance, and tumor cell survival. Expression profiling of PKC-iota is a prognostic marker of poor clinical outcome in several human cancers. PKC-iota also plays a role in establishing cell polarity, and has critical embryonic functions. Length = 329

>gnl|CDD|173720 cd05631, STKc_GRK4, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

 Score = 71.9 bits (176), Expect = 4e-14
 Identities = 51/182 (28%), Positives = 85/182 (46%), Gaps = 9/182 (4%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG+L   I    +  + E+ A     ++     +     +V+RD+KPEN L     +   
Sbjct: 84  GGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLD---DRGH 140

Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRP 166
           ++ +D GL+  I  G+  +  VG+  Y+APEV+  +    S D W +G + Y ++ G+ P
Sbjct: 141 IRISDLGLAVQIPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSP 200

Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALS 221
           F  + E    +EV R   + + +     S  AK   + LL K+P+ RL      AA    
Sbjct: 201 FRKRKERVKREEVDRRVKEDQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260

Query: 222 HP 223
           HP
Sbjct: 261 HP 262

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found in the testis, but is also present in the cerebellum and kidney. It is expressed as multiple splice variants with different domain architectures. It is post-translationally palmitoylated and localized in the membrane. GRK4 polymorphisms are associated with hypertension and salt sensitivity, as they cause hyperphosphorylation, desensitization, and internalization of the dopamine 1 (D1) receptor while increasing the expression of the angiotensin II type 1 receptor. GRK4 plays a crucial role in the D1 receptor regulation of sodium excretion and blood pressure. Length = 285

>gnl|CDD|132982 cd06651, STKc_MEKK3, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

 Score = 71.6 bits (175), Expect = 5e-14
 Identities = 58/187 (31%), Positives = 95/187 (50%), Gaps = 19/187 (10%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG + D++  K     TE       RQ+L   +  H + +VHRD+K  N L  SA    +
Sbjct: 90  GGSVKDQL--KAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSA---GN 144

Query: 108 LKATDFGLSDFIK----PGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC 162
           +K  DFG S  ++     G   + + G+ Y+++PEV+  +  G ++DVWS+G  T + + 
Sbjct: 145 VKLGDFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGC-TVVEML 203

Query: 163 GRRPFWDKTE--DGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQA 219
             +P W + E    IFK  +  +P       PS IS  A+DF+  + V + R R +A + 
Sbjct: 204 TEKPPWAEYEAMAAIFK--IATQPT--NPQLPSHISEHARDFLGCIFV-EARHRPSAEEL 258

Query: 220 LSHPWVR 226
           L HP+ +
Sbjct: 259 LRHPFAQ 265

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development. In addition, MEKK3 is involved in interleukin-1 receptor and Toll-like receptor 4 signaling. It is also a specific regulator of the proinflammatory cytokines IL-6 and GM-CSF in some immune cells. MEKK3 also regulates calcineurin, which plays a critical role in T cell activation, apoptosis, skeletal myocyte differentiation, and cardiac hypertrophy. Length = 266

>gnl|CDD|173676 cd05585, STKc_YPK1_like, Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

 Score = 71.9 bits (176), Expect = 6e-14
 Identities = 54/186 (29%), Positives = 90/186 (48%), Gaps = 22/186 (11%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC-HLHGLVHRDMKPENFLFKSAKEDS 106
           GGEL   +  +++ R+    A     ++L  A E  H   +++RD+KPEN L        
Sbjct: 77  GGELFHHL--QREGRFDLSRARFYTAELL-CALENLHKFNVIYRDLKPENILLDYQ---G 130

Query: 107 SLKATDFGLSDF-IKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGR 164
            +   DFGL    +K   K     G+  Y+APE+L      ++ D W++GV+ Y +L G 
Sbjct: 131 HIALCDFGLCKLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGL 190

Query: 165 RPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARL---TAAQ 218
            PF+D+  + +++++L+     PD            AKD +  LL +DP  RL    A +
Sbjct: 191 PPFYDENVNEMYRKILQEPLRFPD-------GFDRDAKDLLIGLLSRDPTRRLGYNGAQE 243

Query: 219 ALSHPW 224
             +HP+
Sbjct: 244 IKNHPF 249

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It plays a role in cell growth and sexual development. Length = 312

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 72.0 bits (177), Expect = 7e-14
 Identities = 57/194 (29%), Positives = 89/194 (45%), Gaps = 35/194 (18%)

Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ-DIVGSA 132
           Q+LR     H   ++HRD+KP N L  +   +  LK  DFGL+        F  + V + 
Sbjct: 116 QLLRGLKYIHSANVLHRDLKPSNLLLNA---NCDLKICDFGLARTTSEKGDFMTEYVVTR 172

Query: 133 YYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFW-------------------DKT 171
           +Y APE+L   S      DVWS+G I   LL GR+P +                    + 
Sbjct: 173 WYRAPELLLNCSEYTTAIDVWSVGCIFAELL-GRKPLFPGKDYVHQLKLITELLGSPSEE 231

Query: 172 EDGIF-----KEVLRNKPDFRRKP----WPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           + G       +  +R+ P   R+     +P  +  A D ++K+LV DP  R+T  +AL+H
Sbjct: 232 DLGFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291

Query: 223 PWVREGGDASEIPI 236
           P++    D S+ P+
Sbjct: 292 PYLASLHDPSDEPV 305

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 72.1 bits (177), Expect = 7e-14
 Identities = 71/258 (27%), Positives = 107/258 (41%), Gaps = 52/258 (20%)

Query: 16  DMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRIL---AKKDSRYTEKDAAVVV 72
           D+V +   MLPP+R        R+ + I +    EL++  L    K +   T +     +
Sbjct: 60  DIVEIKHIMLPPSR--------REFKDIYVV--FELMESDLHQVIKANDDLTPEHHQFFL 109

Query: 73  RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI---KPGKKF-QDI 128
            Q+LR     H   + HRD+KP+N L   A  D  LK  DFGL+       P   F  D 
Sbjct: 110 YQLLRALKYIHTANVFHRDLKPKNIL---ANADCKLKICDFGLARVAFNDTPTAIFWTDY 166

Query: 129 VGSAYYVAPEV---LKRKSGPESDVWSIGVITYILLCGRRPFWDK--------------- 170
           V + +Y APE+      K  P  D+WSIG I   +L G+  F  K               
Sbjct: 167 VATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGT 226

Query: 171 ----TEDGI-------FKEVLRNKP--DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
               T   +       +   +R K    F +K +P+    A   +++LL  DP+ R TA 
Sbjct: 227 PSPETISRVRNEKARRYLSSMRKKQPVPFSQK-FPNADPLALRLLERLLAFDPKDRPTAE 285

Query: 218 QALSHPWVREGGDASEIP 235
           +AL+ P+ +        P
Sbjct: 286 EALADPYFKGLAKVEREP 303

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|227455 COG5126, FRQ1, Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]

 Score = 68.9 bits (169), Expect = 7e-14
 Identities = 46/164 (28%), Positives = 81/164 (49%), Gaps = 21/164 (12%)

Query: 249 KYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 308
           K S L  F      + L +E++ +L++ F   D D +G I   E+ + L + L +   E+
Sbjct: 4   KISDLLTF------TQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKIL-RSLGFNPSEA 56

Query: 309 RVLEILQAIDCNTDGLVDFSEFVAA-TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFI 367
            + ++ + ID   +  VDF EF+   ++ + + ++ +  +       AF+ FD D DG+I
Sbjct: 57  EINKLFEEIDAGNET-VDFPEFLTVMSVKLKRGDKEEELRE------AFKLFDKDHDGYI 109

Query: 368 TPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRL 405
           +  ELR      G       ++ LL+E D D DG I   EF++L
Sbjct: 110 SIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEIDYEEFKKL 153

Length = 160

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 71.3 bits (175), Expect = 7e-14
 Identities = 52/181 (28%), Positives = 85/181 (46%), Gaps = 35/181 (19%)

Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+    CH   ++HRD+KP+N L  +      +K  DFGL+  F  P + +   V + 
Sbjct: 109 QILQGILFCHSRRVLHRDLKPQNLLIDN---KGVIKLADFGLARAFGIPVRVYTHEVVTL 165

Query: 133 YYVAPEVL---KRKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK---------- 177
           +Y APEVL    R S P  D+WSIG I +  +  ++P +  D   D +F+          
Sbjct: 166 WYRAPEVLLGSPRYSTP-VDIWSIGTI-FAEMATKKPLFHGDSEIDQLFRIFRILGTPTE 223

Query: 178 ------EVLRN--------KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 223
                   L +        K    R    ++     D ++K+L+ DP  R++A +AL+HP
Sbjct: 224 DVWPGVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHP 283

Query: 224 W 224
           +
Sbjct: 284 Y 284

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173688 cd05597, STKc_DMPK_like, Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

 Score = 71.7 bits (176), Expect = 7e-14
 Identities = 57/189 (30%), Positives = 93/189 (49%), Gaps = 17/189 (8%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG+LL  +L+K + R  E  A   + +M+      H  G VHRD+KP+N L     ++  
Sbjct: 85  GGDLLT-LLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLD---KNGH 140

Query: 108 LKATDFGLSDFIKPGKKFQD--IVGSAYYVAPEVL------KRKSGPESDVWSIGVITYI 159
           ++  DFG    +      Q    VG+  Y++PE+L      K + GPE D WS+GV  Y 
Sbjct: 141 IRLADFGSCLRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYE 200

Query: 160 LLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW-PSISNSAKDFVKKLLVKDPRARL---T 215
           +L G  PF+ ++    + +++ +K  F+  P    +S  AKD +++L+   P  RL    
Sbjct: 201 MLYGETPFYAESLVETYGKIMNHKEHFQFPPDVTDVSEEAKDLIRRLICS-PETRLGRNG 259

Query: 216 AAQALSHPW 224
                 HP+
Sbjct: 260 LQDFKDHPF 268

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy, and cardiac conduction defects. The genetic basis for DM1 is the mutational expansion of a CTG repeat in the 3'-UTR of DMPK. DMPK is expressed in skeletal and cardiac muscles, and in central nervous tissues. The functional role of DMPK is not fully understood. It may play a role in the signal transduction and homeostasis of calcium. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKgamma is expressed in heart and skeletal muscles, unlike MRCKalpha and MRCKbeta, which are expressed ubiquitously. Length = 331

>gnl|CDD|88524 cd05623, STKc_MRCK_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

 Score = 72.0 bits (176), Expect = 7e-14
 Identities = 52/171 (30%), Positives = 87/171 (50%), Gaps = 19/171 (11%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG+LL  +L+K + R  E  A   + +M+      H    VHRD+KP+N L      +  
Sbjct: 85  GGDLLT-LLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDM---NGH 140

Query: 108 LKATDFGLSDFIKPGKKFQD--IVGSAYYVAPEVL------KRKSGPESDVWSIGVITYI 159
           ++  DFG    +      Q    VG+  Y++PE+L      K K GPE D WS+GV  Y 
Sbjct: 141 IRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYE 200

Query: 160 LLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS----ISNSAKDFVKKLL 206
           +L G  PF+ ++    + +++ +K  F+   +P+    +S  AKD +++L+
Sbjct: 201 MLYGETPFYAESLVETYGKIMNHKERFQ---FPAQVTDVSEDAKDLIRRLI 248

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathway. Length = 332

>gnl|CDD|132983 cd06652, STKc_MEKK2, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

 Score = 70.1 bits (171), Expect = 1e-13
 Identities = 57/207 (27%), Positives = 100/207 (48%), Gaps = 25/207 (12%)

Query: 26  PPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH 85
           P  R + I +            GG + D++  K     TE       RQ+L   +  H +
Sbjct: 76  PMERTLSIFM--------EHMPGGSIKDQL--KSYGALTENVTRKYTRQILEGVSYLHSN 125

Query: 86  GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK----PGKKFQDIVGSAYYVAPEVLK 141
            +VHRD+K  N L  S     ++K  DFG S  ++     G   + + G+ Y+++PEV+ 
Sbjct: 126 MIVHRDIKGANILRDSV---GNVKLGDFGASKRLQTICLSGTGMKSVTGTPYWMSPEVIS 182

Query: 142 RKS-GPESDVWSIGVITYILLCGRRPFWDKTE--DGIFKEVLRNKPDFRRKPWPSISNSA 198
            +  G ++D+WS+G  T + +   +P W + E    IFK  +  +P     P P +S+  
Sbjct: 183 GEGYGRKADIWSVGC-TVVEMLTEKPPWAEFEAMAAIFK--IATQPTNPVLP-PHVSDHC 238

Query: 199 KDFVKKLLVKDPRARLTAAQALSHPWV 225
           +DF+K++ V + + R +A + L H +V
Sbjct: 239 RDFLKRIFV-EAKLRPSADELLRHTFV 264

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their respective MAPKKs MEK1/2, JNK-activating kinase 2 (JNKK2), and MKK3/6. MEKK2 plays roles in T cell receptor signaling, immune synapse formation, cytokine gene expression, as well as in EGF and FGF receptor signaling. Length = 265

>gnl|CDD|173759 cd08219, STKc_Nek3, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

 Score = 70.0 bits (171), Expect = 1e-13
 Identities = 53/180 (29%), Positives = 88/180 (48%), Gaps = 12/180 (6%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKE 104
           C+GG+L+ +I  ++   + E        QM       H   ++HRD+K +N FL ++ K 
Sbjct: 80  CDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGK- 138

Query: 105 DSSLKATDFGLSDFI-KPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC 162
              +K  DFG +  +  PG      VG+ YYV PE+ +      +SD+WS+G I Y L  
Sbjct: 139 ---VKLGDFGSARLLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCT 195

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALS 221
            + PF    +   +K ++        KP PS  S   +  +K++  ++PR+R +A   LS
Sbjct: 196 LKHPF----QANSWKNLILKVCQGSYKPLPSHYSYELRSLIKQMFKRNPRSRPSATTILS 251

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activation of Vav2 and contributes to prolactin-mediated motility of breast cancer cells. Length = 255

>gnl|CDD|132964 cd06633, STKc_TAO3, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

 Score = 70.8 bits (173), Expect = 1e-13
 Identities = 52/168 (30%), Positives = 80/168 (47%), Gaps = 16/168 (9%)

Query: 65  EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 124
           E + A +    L+  A  H H ++HRD+K  N L     E   +K  DFG +    P   
Sbjct: 120 EVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL---TEPGQVKLADFGSASKSSPANS 176

Query: 125 FQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRP--FWDKTEDGIFKE 178
           F   VG+ Y++APEV+    + +   + DVWS+G IT I L  R+P  F       ++  
Sbjct: 177 F---VGTPYWMAPEVILAMDEGQYDGKVDVWSLG-ITCIELAERKPPLFNMNAMSALYHI 232

Query: 179 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 226
              + P  +   W   ++S + FV   L K P+ R  +A+ L H +VR
Sbjct: 233 AQNDSPTLQSNEW---TDSFRGFVDYCLQKIPQERPASAELLRHDFVR 277

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a component of the RAM (regulation of Ace2p activity and cellular morphogenesis) signaling pathway. TAO3 is upregulated in retinal ganglion cells after axotomy, and may play a role in apoptosis. Length = 313

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 70.9 bits (173), Expect = 2e-13
 Identities = 58/204 (28%), Positives = 88/204 (43%), Gaps = 50/204 (24%)

Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           QML      H  G++HRD+KP N + KS   D +LK  DFGL+            V + Y
Sbjct: 127 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRY 183

Query: 134 YVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGIFKEVLRNKP 184
           Y APEV+      E+ D+WS+G I        IL  GR     W+K    + +++    P
Sbjct: 184 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNK----VIEQLGTPCP 239

Query: 185 DFRRKPWPSISN----------------------------------SAKDFVKKLLVKDP 210
           +F +K  P++ N                                   A+D + K+LV DP
Sbjct: 240 EFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDP 299

Query: 211 RARLTAAQALSHPWVREGGDASEI 234
             R++  +AL HP++    D +E+
Sbjct: 300 AKRISVDEALQHPYINVWYDPAEV 323

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|173678 cd05587, STKc_cPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

 Score = 70.6 bits (173), Expect = 2e-13
 Identities = 41/134 (30%), Positives = 70/134 (52%), Gaps = 9/134 (6%)

Query: 83  HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPE-VL 140
           H  G+++RD+K +N +  +   +  +K  DFG+  + I  GK  +   G+  Y+APE + 
Sbjct: 118 HSKGIIYRDLKLDNVMLDA---EGHIKIADFGMCKENIFGGKTTRTFCGTPDYIAPEIIA 174

Query: 141 KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 200
            +  G   D W+ GV+ Y +L G+ PF  + ED +F+ ++ +   + +    S+S  A  
Sbjct: 175 YQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK----SLSKEAVS 230

Query: 201 FVKKLLVKDPRARL 214
             K LL K P  RL
Sbjct: 231 ICKGLLTKHPAKRL 244

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory domain. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. cPKCs are potent kinases for histones, myelin basic protein, and protamine. PKC-gamma is mainly expressed in neuronal tissues. It plays a role in protection from ischemia. Length = 324

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 70.9 bits (174), Expect = 2e-13
 Identities = 60/197 (30%), Positives = 87/197 (44%), Gaps = 47/197 (23%)

Query: 70  VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---Q 126
           V + Q+LR     H  G++HRD+KP N L  S   +  LK  DFGL+   +P +     Q
Sbjct: 107 VFLYQILRGLKYLHSAGILHRDIKPGNLLVNS---NCVLKICDFGLARVEEPDESKHMTQ 163

Query: 127 DIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF----------------- 167
           ++V + YY APE+L   R      D+WS+G I   LL  R  F                 
Sbjct: 164 EVV-TQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLG 222

Query: 168 ------WDKTEDGIFKEVLRNKPDFRRKPWPSIS----------NSAKDFVKKLLVKDPR 211
                      +G    +LR       KP PS+           + A   + ++LV DP 
Sbjct: 223 TPSLEAMRSACEGARAHILRGPH----KP-PSLPVLYTLSSQATHEAVHLLCRMLVFDPD 277

Query: 212 ARLTAAQALSHPWVREG 228
            R++AA AL+HP++ EG
Sbjct: 278 KRISAADALAHPYLDEG 294

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|173696 cd05605, STKc_GRK4_like, Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

 Score = 69.9 bits (171), Expect = 2e-13
 Identities = 53/188 (28%), Positives = 91/188 (48%), Gaps = 9/188 (4%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L  GG+L   I    +  + E+ A     ++     + H   +V+RD+KPEN L     +
Sbjct: 81  LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLD---D 137

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCG 163
              ++ +D GL+  I  G+  +  VG+  Y+APEV+K  +     D W +G + Y ++ G
Sbjct: 138 YGHIRISDLGLAVEIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEG 197

Query: 164 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQ 218
           + PF  + E    +EV R   + + +     S +A+   ++LL KDP  RL      A +
Sbjct: 198 KSPFRQRKEKVKREEVERRVKEDQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEE 257

Query: 219 ALSHPWVR 226
             +HP+ R
Sbjct: 258 VKAHPFFR 265

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (RH) domain and a catalytic domain, but lack a G protein betagamma-subunit binding domain. They are localized to the plasma membrane through post-translational lipid modification or direct binding to PIP2. Length = 285

>gnl|CDD|173689 cd05598, STKc_LATS, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

 Score = 70.6 bits (173), Expect = 2e-13
 Identities = 51/192 (26%), Positives = 74/192 (38%), Gaps = 52/192 (27%)

Query: 83  HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL---------SDFIKPGKKF-QD----- 127
           H  G +HRD+KP+N L      D  +K TDFGL         S + + G    QD     
Sbjct: 118 HKMGFIHRDIKPDNILID---RDGHIKLTDFGLCTGFRWTHDSKYYQKGDHHRQDSMEPS 174

Query: 128 -----------------------------IVGSAYYVAPEVLKRKSGPES-DVWSIGVIT 157
                                        +VG+  Y+APEVL R    +  D WS+GVI 
Sbjct: 175 EEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 234

Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL--- 214
           Y +L G+ PF   T      +V+  +          +S  A D + + L      RL   
Sbjct: 235 YEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILR-LCCGAEDRLGKN 293

Query: 215 TAAQALSHPWVR 226
            A +  +HP+ +
Sbjct: 294 GADEIKAHPFFK 305

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Length = 376

>gnl|CDD|132976 cd06645, STKc_MAP4K3, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

 Score = 69.3 bits (169), Expect = 2e-13
 Identities = 64/203 (31%), Positives = 96/203 (47%), Gaps = 29/203 (14%)

Query: 40  LRRIRL------CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMK 93
           LRR +L      C GG L D  +       +E   A V R+ L+     H  G +HRD+K
Sbjct: 76  LRRDKLWICMEFCGGGSLQD--IYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIK 133

Query: 94  PENFLFKSAKEDSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEV--LKRKSGPES-- 148
             N L     ++  +K  DFG+S  I     K +  +G+ Y++APEV  ++RK G     
Sbjct: 134 GANILLT---DNGHVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLC 190

Query: 149 DVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDFR------RKPWPSISNSAKDF 201
           D+W++G+    L   + P +D      +F   L  K +F+      +  W   SNS   F
Sbjct: 191 DIWAVGITAIELAELQPPMFDLHPMRALF---LMTKSNFQPPKLKDKMKW---SNSFHHF 244

Query: 202 VKKLLVKDPRARLTAAQALSHPW 224
           VK  L K+P+ R TA + L HP+
Sbjct: 245 VKMALTKNPKKRPTAEKLLQHPF 267

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K3 plays a role in the nutrient-responsive pathway of mTOR (mammalian target of rapamycin) signaling. MAP4K3 is required in the activation of S6 kinase by amino acids and for the phosphorylation of the mTOR-regulated inhibitor of eukaryotic initiation factor 4E. mTOR regulates ribosome biogenesis and protein translation, and is frequently deregulated in cancer. Length = 267

>gnl|CDD|223069 PHA03390, pk1, serine/threonine-protein kinase 1; Provisional

 Score = 69.5 bits (171), Expect = 3e-13
 Identities = 53/171 (30%), Positives = 91/171 (53%), Gaps = 10/171 (5%)

Query: 47  EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 106
           + G+L D  L KK+ + +E +   ++RQ++    + H H ++H D+K EN L+  AK+  
Sbjct: 92  KDGDLFD--LLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKD-- 147

Query: 107 SLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGR 164
            +   D+GL   I  P     D  G+  Y +PE +K  +   S D W++GV+TY LL G+
Sbjct: 148 RIYLCDYGLCKIIGTPSC--YD--GTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGK 203

Query: 165 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 215
            PF +  ++ +  E L  +   +     ++S +A DFV+ +L  +   RLT
Sbjct: 204 HPFKEDEDEELDLESLLKRQQKKLPFIKNVSKNANDFVQSMLKYNINYRLT 254

Length = 267

>gnl|CDD|132973 cd06642, STKc_STK25-YSK1, Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

 Score = 69.3 bits (169), Expect = 3e-13
 Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 19/184 (10%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG  LD +   K     E   A ++R++L+     H    +HRD+K  N L     E   
Sbjct: 86  GGSALDLL---KPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLS---EQGD 139

Query: 108 LKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITYILLCGRR 165
           +K  DFG++  +   + K    VG+ +++APEV+K+ +   ++D+WS+G+    L  G  
Sbjct: 140 VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEP 199

Query: 166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSI----SNSAKDFVKKLLVKDPRARLTAAQALS 221
           P  D     +   + +N P       P++    S   K+FV+  L KDPR R TA + L 
Sbjct: 200 PNSDLHPMRVLFLIPKNSP-------PTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLK 252

Query: 222 HPWV 225
           H ++
Sbjct: 253 HKFI 256

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 is a candidate gene responsible for pseudopseudohypoparathyroidism (PPHP), a disease that shares features with the Albright hereditary osteodystrophy (AHO) phenotype. Length = 277

>gnl|CDD|132961 cd06630, STKc_MEKK1, Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

 Score = 69.1 bits (169), Expect = 3e-13
 Identities = 47/170 (27%), Positives = 74/170 (43%), Gaps = 25/170 (14%)

Query: 72  VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG----LSDFIKPGKKFQ- 126
             Q+LR  +  H + ++HRD+K  N L  S  +   L+  DFG    L+       +FQ 
Sbjct: 109 TEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQR--LRIADFGAAARLAAKGTGAGEFQG 166

Query: 127 DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG-----IFKEVL 180
            ++G+  ++APEVL+ +  G   DVWS+G +   +   + P W+  +       IFK   
Sbjct: 167 QLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPP-WNAEKHSNHLALIFKIAS 225

Query: 181 RNKPDFRRKPWPSI----SNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 226
                      PSI    S   +D   + L   P  R  + + L HP  R
Sbjct: 226 ATTA-------PSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR 268

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their respective MAPKKs, MEK1/2 and MKK4/MKK7, respectively. MEKK1 is important in regulating cell survival and apoptosis. MEKK1 also plays a role in cell migration, tissue maintenance and homeostasis, and wound healing. Length = 268

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 70.1 bits (171), Expect = 3e-13
 Identities = 58/192 (30%), Positives = 85/192 (44%), Gaps = 44/192 (22%)

Query: 83  HLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV- 139
           HLH  G++HRD+KP N + KS   D +LK  DFGL+            V + YY APEV 
Sbjct: 138 HLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVI 194

Query: 140 LKRKSGPESDVWSIGVITYILLCGRRPF--------WDKTEDGI----------FKEVLR 181
           L        D+WS+G I   L+ G   F        W+K  + +           +  +R
Sbjct: 195 LGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVR 254

Query: 182 ----NKPD---------FRRKPWPSIS-------NSAKDFVKKLLVKDPRARLTAAQALS 221
               N+P          F    +PS S       + A+D + K+LV DP  R++  +AL 
Sbjct: 255 NYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALR 314

Query: 222 HPWVREGGDASE 233
           HP++    D +E
Sbjct: 315 HPYITVWYDPAE 326

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|173698 cd05607, STKc_GRK7, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

 Score = 69.2 bits (169), Expect = 4e-13
 Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 13/148 (8%)

Query: 83  HLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL 140
           HLH   +V+RDMKPEN L     +  + + +D GL+  +K GK      G+  Y+APE+L
Sbjct: 110 HLHSMDIVYRDMKPENVLLD---DQGNCRLSDLGLAVELKDGKTITQRAGTNGYMAPEIL 166

Query: 141 KRKSGPES-DVWSIGVITYILLCGRRPFWDKTE----DGIFKEVLRNKPDFRRKPWPSIS 195
           K +      D +++G   Y ++ GR PF D  E    + + +  L ++  F  +   + +
Sbjct: 167 KEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKFEHQ---NFT 223

Query: 196 NSAKDFVKKLLVKDPRARLTAAQALSHP 223
             +KD  +  L K P  RL + +    P
Sbjct: 224 EESKDICRLFLAKKPEDRLGSREKNDDP 251

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual group of GRKs. It is primarily found in the retina and plays a role in the regulation of opsin light receptors. GRK7 is located in retinal cone outer segments and plays an important role in regulating photoresponse of the cones. Length = 277

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 69.7 bits (170), Expect = 5e-13
 Identities = 55/199 (27%), Positives = 87/199 (43%), Gaps = 42/199 (21%)

Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           QML      H  G++HRD+KP N + KS   D +LK  DFGL+            V + Y
Sbjct: 134 QMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPYVVTRY 190

Query: 134 YVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGI--------- 175
           Y APEV+      E+ D+WS+G I   ++ G   F        W+K  + +         
Sbjct: 191 YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMK 250

Query: 176 -----FKEVLRNKPDFR----RKPWPSI------------SNSAKDFVKKLLVKDPRARL 214
                 +  + N+P +      K +P +            ++ A+D + K+LV D   R+
Sbjct: 251 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 310

Query: 215 TAAQALSHPWVREGGDASE 233
           +  +AL HP++    D SE
Sbjct: 311 SVDEALQHPYINVWYDPSE 329

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 69.3 bits (169), Expect = 5e-13
 Identities = 57/207 (27%), Positives = 86/207 (41%), Gaps = 34/207 (16%)

Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 113 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 168

Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 169 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 227

Query: 177 KEVLR--NKPD---FRRKPWPSISN----------------------SAKDFVKKLLVKD 209
           K +LR    P     ++    S  N                       A D ++K+LV D
Sbjct: 228 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 287

Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 288 SDKRITAAQALAHAYFAQYHDPDDEPV 314

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 68.6 bits (168), Expect = 6e-13
 Identities = 52/183 (28%), Positives = 81/183 (44%), Gaps = 35/183 (19%)

Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSA 132
           Q+LR  A CH   ++HRD+KP+N L     E   LK  DFGL+     P K + + V + 
Sbjct: 111 QLLRGLAYCHQRRVLHRDLKPQNLLISERGE---LKLADFGLARAKSVPSKTYSNEVVTL 167

Query: 133 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-----DGIFK-------- 177
           +Y  P+VL    +     D+W +G I Y +  GR  F   T+       IF+        
Sbjct: 168 WYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEE 227

Query: 178 ---EVLRNK-------PDFRRKP----WPSIS--NSAKDFVKKLLVKDPRARLTAAQALS 221
               V  N        P +  +P     P +      ++   K L  +P+ R++AA+A+ 
Sbjct: 228 TWPGVSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287

Query: 222 HPW 224
           HP+
Sbjct: 288 HPY 290

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 68.9 bits (168), Expect = 6e-13
 Identities = 49/186 (26%), Positives = 79/186 (42%), Gaps = 32/186 (17%)

Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSA 132
           Q+LR    CH   ++HRD+KP+N L     E   LK  DFGL+     P K + + V + 
Sbjct: 112 QLLRGLNYCHRRKVLHRDLKPQNLLI---NERGELKLADFGLARAKSIPTKTYSNEVVTL 168

Query: 133 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--------- 181
           +Y  P++L        + D+W +G I Y +  GR  F   T +     + R         
Sbjct: 169 WYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEET 228

Query: 182 -------------NKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 224
                        N P +R        P + +   + + KLL  + R R++A +A+ HP+
Sbjct: 229 WPGILSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPY 288

Query: 225 VREGGD 230
               G+
Sbjct: 289 FHCLGE 294

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|173710 cd05620, STKc_nPKC_delta, Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

 Score = 68.8 bits (168), Expect = 7e-13
 Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)

Query: 83  HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLK 141
           H  G+++RD+K +N +      D  +K  DFG+  + +    +     G+  Y+APE+L+
Sbjct: 113 HSKGIIYRDLKLDNVMLD---RDGHIKIADFGMCKENVFGDNRASTFCGTPDYIAPEILQ 169

Query: 142 -RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 200
             K     D WS GV+ Y +L G+ PF    ED +F+ +  + P + R  W  I+  +KD
Sbjct: 170 GLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYPR--W--ITKESKD 225

Query: 201 FVKKLLVKDPRARL 214
            ++KL  +DP  RL
Sbjct: 226 ILEKLFERDPTRRL 239

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhancing cell differentiation. PKC-delta is also involved in the regulation of transcription as well as immune and inflammatory responses. It plays a central role in the genotoxic stress response that leads to DNA damaged-induced apoptosis. Length = 316

>gnl|CDD|132969 cd06638, STKc_myosinIIIA, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

 Score = 68.5 bits (167), Expect = 7e-13
 Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 17/194 (8%)

Query: 43  IRLCEGGELLDRI--LAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 100
           + LC GG + D +    K+  R  E   A ++ + L      H++  +HRD+K  N L  
Sbjct: 99  LELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLT 158

Query: 101 SAKEDSSLKATDFGLSDFIKPGKKFQDI-VGSAYYVAPEVLKRKSGPES------DVWSI 153
           +   +  +K  DFG+S  +   +  ++  VG+ +++APEV+  +   +S      DVWS+
Sbjct: 159 T---EGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSL 215

Query: 154 GVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP--WPSISNSAKDFVKKLLVKDPR 211
           G+    L  G  P  D        ++ RN P    +P  W   SN   DF++K L KD  
Sbjct: 216 GITAIELGDGDPPLADLHPMRALFKIPRNPPPTLHQPELW---SNEFNDFIRKCLTKDYE 272

Query: 212 ARLTAAQALSHPWV 225
            R T +  L H ++
Sbjct: 273 KRPTVSDLLQHVFI 286

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear hair cells. It is localized to the distal ends of actin-bundled structures. Mutations in human myosin IIIA are responsible for progressive nonsyndromic hearing loss. Human myosin IIIA possesses ATPase and kinase activities, and the ability to move actin filaments in a motility assay. It may function as a cellular transporter capable of moving along actin bundles in sensory cells. Length = 286

>gnl|CDD|173708 cd05617, STKc_aPKC_zeta, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

 Score = 68.5 bits (167), Expect = 8e-13
 Identities = 51/182 (28%), Positives = 87/182 (47%), Gaps = 20/182 (10%)

Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           I    GG+L+  +  ++  +  E+ A     ++       H  G+++RD+K +N L    
Sbjct: 75  IEYVNGGDLMFHM--QRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLD-- 130

Query: 103 KEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYIL 160
             D  +K TD+G+  + + PG       G+  Y+APE+L+  + G   D W++GV+ + +
Sbjct: 131 -ADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEM 189

Query: 161 LCGRRPFWD--------KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRA 212
           + GR PF D         TED +F+ +L       R     +S  A   +K  L KDP+ 
Sbjct: 190 MAGRSPF-DIITDNPDMNTEDYLFQVILEKPIRIPR----FLSVKASHVLKGFLNKDPKE 244

Query: 213 RL 214
           RL
Sbjct: 245 RL 246

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways. PKC-zeta also plays a central role in maintaining cell polarity in yeast and mammalian cells. In addition, it affects actin remodeling in muscle cells. Length = 327

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 67.8 bits (166), Expect = 1e-12
 Identities = 58/215 (26%), Positives = 87/215 (40%), Gaps = 52/215 (24%)

Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           L  +L+ K+ ++T  +   V++ +L      H + ++HRDMK  N L     +D  LK  
Sbjct: 105 LAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILIT---KDGILKLA 161

Query: 112 DFGLS-DFIKP----GKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVI-------- 156
           DFGL+  F         ++ + V + +Y  PE+L  +R  GP  D+W  G I        
Sbjct: 162 DFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRS 221

Query: 157 ------------TYIL-LCG-----------RRPFWDKTE---DGIFKEVLRNKPDFRRK 189
                       T I  LCG           +   + K E       K   R KP  +  
Sbjct: 222 PIMQGNTEQHQLTLISQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVK-- 279

Query: 190 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 224
                   A D + KLLV DP  R+ A  AL+H +
Sbjct: 280 -----DPHALDLIDKLLVLDPAKRIDADTALNHDF 309

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|173772 cd08530, STKc_CNK2-like, Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

 Score = 67.1 bits (164), Expect = 1e-12
 Identities = 45/154 (29%), Positives = 75/154 (48%), Gaps = 10/154 (6%)

Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           Q+LR     H   ++HRD+K  N +   A +   +K  D G+S  +K       I G+ +
Sbjct: 111 QLLRGLQALHEQKILHRDLKSAN-ILLVANDL--VKIGDLGISKVLKKNMAKTQI-GTPH 166

Query: 134 YVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 192
           Y+APEV K +    +SD+WS+G + Y +     PF  ++   +  +V R K      P P
Sbjct: 167 YMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYP----PIP 222

Query: 193 SI-SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
            I S   ++F++ +L   P+ R    + L+ P V
Sbjct: 223 PIYSQDLQNFIRSMLQVKPKLRPNCDKILASPAV 256

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, and it regulates cell size, through influencing the size threshold at which cells commit to mitosis. Length = 256

>gnl|CDD|132951 cd06620, PKc_MAPKK_Byr1_like, Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

 Score = 67.1 bits (164), Expect = 2e-12
 Identities = 50/169 (29%), Positives = 76/169 (44%), Gaps = 26/169 (15%)

Query: 85  HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI----VGSAYYVAPEVL 140
           H ++HRD+KP N L  S  +   +K  DFG+S     G+    I    VG++ Y++PE +
Sbjct: 123 HRIMHRDIKPSNILVNSRGQ---IKLCDFGVS-----GELINSIADTFVGTSTYMSPERI 174

Query: 141 K-RKSGPESDVWSIGVITYILLCGRRPFWDKTED--------GIFKEVLR--NKPDFRRK 189
           +  K   +SDVWS+G+    L  G+ PF     D        GI   + +   +P   R 
Sbjct: 175 QGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPP-PRL 233

Query: 190 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDI 238
           P        +DFV   L+KDP  R T  Q  + P   +        +D+
Sbjct: 234 PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQA--LRASNVDL 280

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Byr1 from Schizosaccharomyces pombe, FUZ7 from Ustilago maydis, and related proteins. Byr1 phosphorylates its downstream target, the MAPK Spk1, and is regulated by the MAPKKK Byr2. The Spk1 cascade is pheromone-responsive and is essential for sporulation and sexual differentiation in fission yeast. FUZ7 phosphorylates and activates its target, the MAPK Crk1, which is required in mating and virulence in U. maydis. Length = 284

>gnl|CDD|173680 cd05589, STKc_PKN, Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

 Score = 67.4 bits (165), Expect = 2e-12
 Identities = 39/138 (28%), Positives = 72/138 (52%), Gaps = 9/138 (6%)

Query: 83  HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLK 141
           H + +V+RD+K +N L  +   +  +K  DFGL  + +  G +     G+  ++APEVL 
Sbjct: 118 HENKIVYRDLKLDNLLLDT---EGFVKIADFGLCKEGMGFGDRTSTFCGTPEFLAPEVLT 174

Query: 142 RKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 200
             S   + D W +GV+ Y +L G  PF    E+ +F  ++ ++  + R     +S  A  
Sbjct: 175 ETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYPR----FLSREAIS 230

Query: 201 FVKKLLVKDPRARLTAAQ 218
            +++LL ++P  RL + +
Sbjct: 231 IMRRLLRRNPERRLGSGE 248

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved in many biological processes including cytokeletal regulation, cell adhesion, vesicle transport, glucose transport, regulation of meiotic maturation and embryonic cell cycles, signaling to the nucleus, and tumorigenesis. Length = 324

>gnl|CDD|173679 cd05588, STKc_aPKC, Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

 Score = 67.2 bits (164), Expect = 2e-12
 Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 24/161 (14%)

Query: 83  HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLK 141
           H  G+++RD+K +N L  +   +  +K TD+G+  + I+PG       G+  Y+APE+L+
Sbjct: 113 HERGIIYRDLKLDNVLLDA---EGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPEILR 169

Query: 142 RKS-GPESDVWSIGVITYILLCGRRPF---------WDKTEDGIFKEVLRNKPDFRRKPW 191
            +  G   D W++GV+ + ++ GR PF            TED +F+ +L  +    R   
Sbjct: 170 GEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPR--- 226

Query: 192 PSISNSAKDFVKKLLVKDPRARLTA------AQALSHPWVR 226
            S+S  A   +K  L KDP+ RL            SHP+ R
Sbjct: 227 -SLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFR 266

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions including proliferation, migration, apoptosis, polarity maintenance and cytoskeletal regulation. They also play a critical role in the regulation of glucose metabolism and in the pathogenesis of type 2 diabetes. Length = 329

>gnl|CDD|173616 PTZ00426, PTZ00426, cAMP-dependent protein kinase catalytic subunit; Provisional

 Score = 67.3 bits (164), Expect = 3e-12
 Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 17/183 (9%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGE       +++ R+          Q++ +        +V+RD+KPEN L     +D  
Sbjct: 115 GGEFF--TFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLD---KDGF 169

Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITYILLCGRRP 166
           +K TDFG +  +    +   + G+  Y+APE+L     G  +D W++G+  Y +L G  P
Sbjct: 170 IKMTDFGFAKVVD--TRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPP 227

Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALS 221
           F+      I++++L     F +     + N+ K  +KKLL  D   R       A     
Sbjct: 228 FYANEPLLIYQKILEGIIYFPK----FLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKE 283

Query: 222 HPW 224
           HPW
Sbjct: 284 HPW 286

Length = 340

>gnl|CDD|215036 PLN00034, PLN00034, mitogen-activated protein kinase kinase; Provisional

 Score = 67.2 bits (164), Expect = 3e-12
 Identities = 52/175 (29%), Positives = 77/175 (44%), Gaps = 24/175 (13%)

Query: 65  EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-KPGK 123
           E+  A V RQ+L   A  H   +VHRD+KP N L  SAK   ++K  DFG+S  + +   
Sbjct: 167 EQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAK---NVKIADFGVSRILAQTMD 223

Query: 124 KFQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPF-------WDK 170
                VG+  Y++PE +          G   D+WS+GV       GR PF       W  
Sbjct: 224 PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWAS 283

Query: 171 TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
               I    +   P+       + S   + F+   L ++P  R +A Q L HP++
Sbjct: 284 LMCAI---CMSQPPE----APATASREFRHFISCCLQREPAKRWSAMQLLQHPFI 331

Length = 353

>gnl|CDD|132966 cd06635, STKc_TAO1, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

 Score = 67.0 bits (163), Expect = 3e-12
 Identities = 51/167 (30%), Positives = 78/167 (46%), Gaps = 16/167 (9%)

Query: 65  EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 124
           E + A +    L+  A  H H ++HRD+K  N L     E   +K  DFG +    P   
Sbjct: 124 EVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILL---TEPGQVKLADFGSASIASPANS 180

Query: 125 FQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRP--FWDKTEDGIFKE 178
           F   VG+ Y++APEV+    + +   + DVWS+G IT I L  R+P  F       ++  
Sbjct: 181 F---VGTPYWMAPEVILAMDEGQYDGKVDVWSLG-ITCIELAERKPPLFNMNAMSALYHI 236

Query: 179 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
                P  +   W   S+  ++FV   L K P+ R T+ + L H +V
Sbjct: 237 AQNESPTLQSNEW---SDYFRNFVDSCLQKIPQDRPTSEELLKHMFV 280

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuronal apoptosis. TAO1 interacts with the checkpoint proteins BubR1 and Mad2, and plays an important role in regulating mitotic progression, which is required for both chromosome congression and checkpoint-induced anaphase delay. TAO1 may play a role in protecting genomic stability. Length = 317

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 66.7 bits (163), Expect = 3e-12
 Identities = 48/194 (24%), Positives = 80/194 (41%), Gaps = 35/194 (18%)

Query: 63  YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 122
           ++E      ++Q+L     CH    +HRD+K  N L  +  +   +K  DFGL+      
Sbjct: 113 FSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQ---IKLADFGLARLYNSE 169

Query: 123 KK--FQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF----------- 167
           +   + + V + +Y  PE+L  + + GP  DVWS G I   L   ++P            
Sbjct: 170 ESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFT-KKPIFQANQELAQLE 228

Query: 168 -------------WDKTEDGIFKEVLRNKPDFRRK---PWPSISNSAKDFVKKLLVKDPR 211
                        W       +   ++ K  +RR+    +  I   A D +  +L  DP 
Sbjct: 229 LISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPS 288

Query: 212 ARLTAAQALSHPWV 225
            R TA +AL+ PW+
Sbjct: 289 KRCTAEEALNSPWL 302

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|173716 cd05627, STKc_NDR2, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

 Score = 66.6 bits (162), Expect = 4e-12
 Identities = 66/247 (26%), Positives = 106/247 (42%), Gaps = 54/247 (21%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG+++  +L KKD+   E     +   +L + A  H  G +HRD+KP+N L  +      
Sbjct: 85  GGDMMT-LLMKKDTLSEEATQFYIAETVLAIDA-IHQLGFIHRDIKPDNLLLDAK---GH 139

Query: 108 LKATDFGLSDFIKPGKK----------------FQDI--------------------VGS 131
           +K +DFGL   +K   +                FQ++                    VG+
Sbjct: 140 VKLSDFGLCTGLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGT 199

Query: 132 AYYVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 190
             Y+APEV  +    +  D WS+GVI Y +L G  PF  +T    +++V+  K      P
Sbjct: 200 PDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYRKVMNWKETLVFPP 259

Query: 191 WPSISNSAKDFVKKLLVKDPRARLTAA---QALSHPWVREGGD-------ASEIPIDISV 240
              IS  AKD + +    D   R+ +    +  SHP+  EG D        + IPI+I  
Sbjct: 260 EVPISEKAKDLILRFCT-DSENRIGSNGVEEIKSHPFF-EGVDWGHIRERPAAIPIEIKS 317

Query: 241 LNNMRQF 247
           +++   F
Sbjct: 318 IDDTSNF 324

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regulating neuronal growth and differentiation, as well as in facilitating neurite outgrowth. It is also implicated in fear conditioning as it contributes to the coupling of neuronal morphological changes with fear-memory consolidation. NDR2 is also referred to as STK38-like. Length = 360

>gnl|CDD|173690 cd05599, STKc_NDR_like, Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 66.2 bits (162), Expect = 6e-12
 Identities = 56/222 (25%), Positives = 92/222 (41%), Gaps = 49/222 (22%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG+++  +L KKD+ +TE++    + + +      H  G +HRD+KP+N L  +      
Sbjct: 85  GGDMMT-LLMKKDT-FTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDA---KGH 139

Query: 108 LKATDFGL---------SDF------IKPGKKFQDI------------------------ 128
           +K +DFGL         ++F        P      I                        
Sbjct: 140 IKLSDFGLCTGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYST 199

Query: 129 VGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR 187
           VG+  Y+APEV  +     E D WS+GVI Y +L G  PF        +++++  K   +
Sbjct: 200 VGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVGYPPFCSDNPQETYRKIINWKETLQ 259

Query: 188 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQA---LSHPWVR 226
                 +S  AKD +K+L   +   RL         SHP+ +
Sbjct: 260 FPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFK 300

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplication. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. This subfamily also contains fungal NDR-like kinases. Length = 364

>gnl|CDD|173770 cd08528, STKc_Nek10, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

 Score = 65.2 bits (159), Expect = 6e-12
 Identities = 45/130 (34%), Positives = 68/130 (52%), Gaps = 11/130 (8%)

Query: 45  LCEGGELLDRI--LAKKDSRYTEKDAAVVVRQMLRVAAECHLHG---LVHRDMKPENFLF 99
           L EG  L +    L +K  R+TE+    +  QM  V A  +LH    +VHRD+ P N + 
Sbjct: 90  LIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQM--VLALRYLHKEKRIVHRDLTPNNIML 147

Query: 100 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITY 158
               ED  +  TDFGL+   +P  K   +VG+  Y  PE++K +  G ++DVW+ G I Y
Sbjct: 148 G---EDDKVTITDFGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILY 204

Query: 159 ILLCGRRPFW 168
            +   + PF+
Sbjct: 205 QMCTLQPPFY 214

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24. Length = 269

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 65.8 bits (161), Expect = 6e-12
 Identities = 52/210 (24%), Positives = 79/210 (37%), Gaps = 43/210 (20%)

Query: 55  ILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG 114
           +L     + TE      + Q+L      H + ++HRD+K  N L  +      LK  DFG
Sbjct: 104 LLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDN---QGILKIADFG 160

Query: 115 LSDFI-----KPGK-------KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYIL 160
           L+         P         K+ ++V + +Y  PE+L  +R+     D+W IG +   +
Sbjct: 161 LARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEM 220

Query: 161 LCGRRPFWDKTE----DGIFK-------------EVLRNKPDFR-RKPWPSI--SNSAK- 199
              R     K++      IFK               L           +P        K 
Sbjct: 221 FTRRPILQGKSDIDQLHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKL 280

Query: 200 -----DFVKKLLVKDPRARLTAAQALSHPW 224
                D + KLL  DP  RLTA+ AL HP+
Sbjct: 281 GPEGLDLLSKLLSLDPYKRLTASDALEHPY 310

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|173717 cd05628, STKc_NDR1, Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

 Score = 66.2 bits (161), Expect = 6e-12
 Identities = 63/248 (25%), Positives = 105/248 (42%), Gaps = 50/248 (20%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG+++  +L KKD+  TE++    + + +      H  G +HRD+KP+N L  S      
Sbjct: 85  GGDMMT-LLMKKDT-LTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSK---GH 139

Query: 108 LKATDFGLSDFIKPGKK----------------FQDI--------------------VGS 131
           +K +DFGL   +K   +                FQ++                    VG+
Sbjct: 140 VKLSDFGLCTGLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGT 199

Query: 132 AYYVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 190
             Y+APEV  +    +  D WS+GVI Y +L G  PF  +T    +K+V+  K      P
Sbjct: 200 PDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPPFCSETPQETYKKVMNWKETLIFPP 259

Query: 191 WPSISNSAKDFVKKLLVK-DPRARLTAAQALSHPWVREGGD-------ASEIPIDISVLN 242
              IS  AKD + +   + + R      + +      EG D        + IPI+I  ++
Sbjct: 260 EVPISEKAKDLILRFCCEWEHRIGAPGVEEIKTNPFFEGVDWEHIRERPAAIPIEIKSID 319

Query: 243 NMRQFVKY 250
           +   F ++
Sbjct: 320 DTSNFDEF 327

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, muscle, lung and spleen. It is not an essential protein because mice deficient of NDR1 remain viable and fertile. However, these mice develop T-cell lymphomas and appear to be hypersenstive to carcinogenic treatment. NDR1 appears to act as a tumor suppressor. NDR1 is also called STK38. Length = 363

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 65.4 bits (159), Expect = 6e-12
 Identities = 50/181 (27%), Positives = 77/181 (42%), Gaps = 34/181 (18%)

Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSA 132
           Q+LR  + CH   ++HRD+KP+N L     E   LK  DFGL+     P K + + V + 
Sbjct: 111 QLLRGLSYCHKRKILHRDLKPQNLLI---NEKGELKLADFGLARAKSVPTKTYSNEVVTL 167

Query: 133 YYVAPEVL---KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-------- 181
           +Y  P+VL      S P  D+W +G I Y +  GR  F   T       + R        
Sbjct: 168 WYRPPDVLLGSTEYSTP-IDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEE 226

Query: 182 --------------NKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHP 223
                           P +R +P     P +     D +  LL+ + ++R++A  AL H 
Sbjct: 227 TWPGITSNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHS 286

Query: 224 W 224
           +
Sbjct: 287 Y 287

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|173712 cd05622, STKc_ROCK1, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

 Score = 66.2 bits (161), Expect = 7e-12
 Identities = 47/139 (33%), Positives = 66/139 (47%), Gaps = 11/139 (7%)

Query: 83  HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDI-VGSAYYVAPEVL 140
           H  G +HRD+KP+N L   +     LK  DFG      K G    D  VG+  Y++PEVL
Sbjct: 159 HSMGFIHRDVKPDNMLLDKS---GHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVL 215

Query: 141 KRKSGP-----ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS 195
           K + G      E D WS+GV  Y +L G  PF+  +  G + +++ +K          IS
Sbjct: 216 KSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDIS 275

Query: 196 NSAKDFVKKLLVKDPRARL 214
             AK+ +   L  D   RL
Sbjct: 276 KEAKNLICAFLT-DREVRL 293

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, and kidney. It mediates signaling from Rho to the actin cytoskeleton. It is implicated in the development of cardiac fibrosis, cardiomyocyte apoptosis, and hyperglycemia. Mice deficient with ROCK1 display eyelids open at birth (EOB) and omphalocele phenotypes due to the disorganization of actin filaments in the eyelids and the umbilical ring. Length = 371

>gnl|CDD|173695 cd05604, STKc_SGK3, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

 Score = 65.8 bits (160), Expect = 8e-12
 Identities = 48/171 (28%), Positives = 80/171 (46%), Gaps = 11/171 (6%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGEL   +  +++  + E  A     ++       H   +V+RD+KPEN L  S      
Sbjct: 80  GGELFFHL--QRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQ---GH 134

Query: 108 LKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRR 165
           +  TDFGL  + I          G+  Y+APEV++++    + D W +G + Y +L G  
Sbjct: 135 VVLTDFGLCKEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLP 194

Query: 166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA 216
           PF+ +    ++  +L      R    P  S +A   +++LL KD + RL A
Sbjct: 195 PFYCRDVAEMYDNILHKPLVLR----PGASLTAWSILEELLEKDRQRRLGA 241

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels, and receptors. It plays a critical role in hair follicle morphogenesis and hair cycling. Length = 325

>gnl|CDD|173699 cd05608, STKc_GRK1, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

 Score = 64.9 bits (158), Expect = 9e-12
 Identities = 51/192 (26%), Positives = 92/192 (47%), Gaps = 12/192 (6%)

Query: 45  LCEGGELLDRI--LAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +  GG+L   I  + +++  + E  A     Q++      H   +++RD+KPEN L    
Sbjct: 74  IMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLL--- 130

Query: 103 KEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYIL 160
             D +++ +D GL+  +K G+ K +   G+  ++APE+L+ +    S D +++GV  Y +
Sbjct: 131 DNDGNVRISDLGLAVELKDGQSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEM 190

Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----T 215
           +  R PF  + E    KE+ +   +         S ++K F + LL KDP  RL      
Sbjct: 191 IAARGPFRARGEKVENKELKQRILNDSVTYPDKFSPASKSFCEALLAKDPEKRLGFRDGN 250

Query: 216 AAQALSHPWVRE 227
                +HP  R+
Sbjct: 251 CDGLRTHPLFRD 262

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual group of GRKs and is expressed in retinal cells. It phosphorylates rhodopsin in rod cells, which leads to termination of the phototransduction cascade. Mutations in GRK1 are associated to a recessively inherited form of stationary nightblindness called Oguchi disease. Length = 280

>gnl|CDD|132970 cd06639, STKc_myosinIIIB, Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

 Score = 65.0 bits (158), Expect = 1e-11
 Identities = 50/195 (25%), Positives = 88/195 (45%), Gaps = 17/195 (8%)

Query: 43  IRLCEGGELLDRI--LAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 100
           + LC GG + + +  L     R  E   + ++   L      H + ++HRD+K  N L  
Sbjct: 103 LELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLT 162

Query: 101 SAKEDSSLKATDFGLSDFIKPGKKFQDI-VGSAYYVAPEVLKRKSGPES------DVWSI 153
           +   +  +K  DFG+S  +   +  ++  VG+ +++APEV+  +   +       DVWS+
Sbjct: 163 T---EGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSL 219

Query: 154 GVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP--WPSISNSAKDFVKKLLVKDPR 211
           G+    L  G  P +D        ++ RN P     P  W     S   F+ + L+KD  
Sbjct: 220 GITAIELGDGDPPLFDMHPVKTLFKIPRNPPPTLLHPEKW---CRSFNHFISQCLIKDFE 276

Query: 212 ARLTAAQALSHPWVR 226
           AR +    L HP+++
Sbjct: 277 ARPSVTHLLEHPFIK 291

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also present in the brain and testis. The human class IIIB myosin gene maps to a region that overlaps the locus for Bardet-Biedl syndrome, which is characterized by dysmorphic extremities, retinal dystrophy, obesity, male hypogenitalism, and renal abnormalities. Length = 291

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 65.0 bits (158), Expect = 1e-11
 Identities = 48/183 (26%), Positives = 81/183 (44%), Gaps = 34/183 (18%)

Query: 72  VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK--KFQDIV 129
           + Q+++    CH + +VHRD+KPEN L      +  LK  DFG +  +  G    + + V
Sbjct: 106 IYQLIKAIHWCHKNDIVHRDIKPENLLISH---NDVLKLCDFGFARNLSEGSNANYTEYV 162

Query: 130 GSAYYVAPE-VLKRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------- 177
            + +Y +PE +L    G   D+WS+G I   L  G+  F  ++E D +F           
Sbjct: 163 ATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPA 222

Query: 178 ---EVLRNKPDFRRKPWPSISNSAK--------------DFVKKLLVKDPRARLTAAQAL 220
              ++  + P F    +P++++                 D +K LL  +P  R    Q L
Sbjct: 223 EQMKLFYSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCL 282

Query: 221 SHP 223
           +HP
Sbjct: 283 NHP 285

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 65.0 bits (159), Expect = 1e-11
 Identities = 61/199 (30%), Positives = 87/199 (43%), Gaps = 43/199 (21%)

Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG----LSDFIKPGKKFQ-DI 128
           Q+LR     H   ++HRD+KP N L     ED  L+  DFG    LS      K F  + 
Sbjct: 115 QLLRGLKYIHSANVIHRDLKPSNLLV---NEDCELRIGDFGMARGLSSSPTEHKYFMTEY 171

Query: 129 VGSAYYVAPEVLKRKSGPES----DVWSIGVITYILLCGRRP-FWDKT------------ 171
           V + +Y APE+L   S PE     D+WS+G I   +L GRR  F  K             
Sbjct: 172 VATRWYRAPELL--LSLPEYTTAIDMWSVGCIFAEML-GRRQLFPGKNYVHQLKLILSVL 228

Query: 172 ---EDGIFKEV--------LRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTA 216
               + +   +        ++N P  +  PW    P  S  A D + ++L  DP  R+T 
Sbjct: 229 GSPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITV 288

Query: 217 AQALSHPWVREGGDASEIP 235
            QAL HP++ +  D  + P
Sbjct: 289 EQALQHPFLAQYHDPDDEP 307

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|173694 cd05603, STKc_SGK2, Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

 Score = 64.6 bits (157), Expect = 2e-11
 Identities = 47/171 (27%), Positives = 80/171 (46%), Gaps = 11/171 (6%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGEL   +  +++  + E  A     ++       H   +++RD+KPEN L  S      
Sbjct: 80  GGELFFHL--QRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDS---QGH 134

Query: 108 LKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRR 165
           +  TDFGL  + ++P +      G+  Y+APEVL+++    + D W +G + Y +L G  
Sbjct: 135 VVLTDFGLCKEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLP 194

Query: 166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA 216
           PF+ +    ++  +L              + +A D +  LL KD R RL A
Sbjct: 195 PFYSRDVSQMYDNILHKPLQLP----GGKTVAACDLLVGLLHKDQRRRLGA 241

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1. Length = 321

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 64.2 bits (156), Expect = 2e-11
 Identities = 52/199 (26%), Positives = 86/199 (43%), Gaps = 33/199 (16%)

Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSA 132
           Q+LR  A CH   ++HRD+KP+N L     E   LK  DFGL+     P K + + V + 
Sbjct: 112 QILRGLAYCHRRKVLHRDLKPQNLLI---NERGELKLADFGLARAKSVPTKTYSNEVVTL 168

Query: 133 YYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--------- 181
           +Y  P+VL   S    + D+W +G I + +  GR  F   T +     + R         
Sbjct: 169 WYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEET 228

Query: 182 -------------NKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 224
                        N P ++ +P     P +     + + K L  + + R++A +A+ H +
Sbjct: 229 WPGISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAY 288

Query: 225 VRE-GGDASEIPIDISVLN 242
            R  G     +P  IS+ +
Sbjct: 289 FRSLGTRIHSLPESISIFS 307

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|173707 cd05616, STKc_cPKC_beta, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

 Score = 64.3 bits (156), Expect = 2e-11
 Identities = 46/169 (27%), Positives = 85/169 (50%), Gaps = 11/169 (6%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG+L+ +I  ++  R+ E  A     ++       H  G+++RD+K +N +  S   +  
Sbjct: 85  GGDLMYQI--QQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDS---EGH 139

Query: 108 LKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRR 165
           +K  DFG+  + +  G   +   G+  Y+APE++  +  G   D W+ GV+ Y +L G+ 
Sbjct: 140 IKIADFGMCKENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQA 199

Query: 166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 214
           PF  + ED +F+ ++ +   + +    S+S  A    K L+ K P  RL
Sbjct: 200 PFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICKGLMTKHPGKRL 244

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicing of a single gene, are preferentially activated by hyperglycemia-induced DAG in retinal tissues. This is implicated in diabetic microangiopathy such as ischemia, neovascularization, and abnormal vasodilator function. PKC-beta also plays an important role in VEGF signaling. In addition, glucose regulates proliferation in retinal endothelial cells via PKC-betaI. PKC-beta is also being explored as a therapeutic target in cancer. It contributes to tumor formation and is involved in the tumor host mechanisms of inflammation and angiogenesis. Length = 323

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 64.3 bits (157), Expect = 2e-11
 Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 32/205 (15%)

Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           L  +L    + ++E     ++ Q+LR     H + ++HRD+K  N L         LK  
Sbjct: 94  LASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGC---LKIA 150

Query: 112 DFGLS-DFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW 168
           DFGL+  +  P K     V + +Y APE+L          D+W++G I   LL  +    
Sbjct: 151 DFGLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLP 210

Query: 169 DKTE---------------DGIF----------KEVLRNKP-DFRRKPWPSISNSAKDFV 202
            K+E               + I+          K  L  +P +  +  +P +S +    +
Sbjct: 211 GKSEIEQLDLIIQLLGTPNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLL 270

Query: 203 KKLLVKDPRARLTAAQALSHPWVRE 227
             LL+ DP+ R TA +AL   + +E
Sbjct: 271 NFLLMYDPKKRATAEEALESSYFKE 295

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|132965 cd06634, STKc_TAO2, Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

 Score = 64.3 bits (156), Expect = 2e-11
 Identities = 51/164 (31%), Positives = 75/164 (45%), Gaps = 16/164 (9%)

Query: 65  EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 124
           E + A V    L+  A  H H ++HRD+K  N L     E   +K  DFG +  + P   
Sbjct: 114 EVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAPANX 170

Query: 125 FQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRP--FWDKTEDGIFKE 178
           F   VG+ Y++APEV+    + +   + DVWS+G IT I L  R+P  F       ++  
Sbjct: 171 F---VGTPYWMAPEVILAMDEGQYDGKVDVWSLG-ITCIELAERKPPLFNMNAMSALYHI 226

Query: 179 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
                P  +   W   S   ++FV   L K P+ R T+   L H
Sbjct: 227 AQNESPALQSGHW---SEYFRNFVDSCLQKIPQDRPTSEVLLKH 267

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. TAO2 contains a long C-terminal extension with autoinhibitory segments. It is activated by the release of this inhibition and the phosphorylation of its activation loop serine. TAO2 functions as a regulator of actin cytoskeletal and microtubule organization. In addition, it regulates the transforming growth factor-activated kinase 1 (TAK1), which is a MAPKKK that plays an essential role in the signaling pathways of tumor necrosis factor (TNF), interleukin 1 (IL-1), and Toll-like receptor (TLR). Length = 308

>gnl|CDD|173762 cd08222, STKc_Nek11, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

 Score = 63.0 bits (153), Expect = 3e-11
 Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 19/188 (10%)

Query: 46  CEGGELLDRI--LAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 103
           CEG +L  ++  L       +E        Q+L      H   ++HRD+K +N   K   
Sbjct: 84  CEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLK--- 140

Query: 104 EDSSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILL 161
            ++ LK  DFG+S  +           G+ YY++PE LK +    +SD+WS+G I Y + 
Sbjct: 141 -NNLLKIGDFGVSRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMC 199

Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI----SNSAKDFVKKLLVKDPRARLTAA 217
           C    F  +    +   ++         P PS+    S      ++ +L KDP  R +AA
Sbjct: 200 CLAHAFEGQNFLSVVLRIVEG-------PTPSLPETYSRQLNSIMQSMLNKDPSLRPSAA 252

Query: 218 QALSHPWV 225
           + L +P++
Sbjct: 253 EILRNPFI 260

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M checkpoint. Nek11 may also play a role in the S-phase checkpoint as well as in DNA replication and genotoxic stress responses. Length = 260

>gnl|CDD|173706 cd05615, STKc_cPKC_alpha, Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

 Score = 63.9 bits (155), Expect = 3e-11
 Identities = 39/138 (28%), Positives = 70/138 (50%), Gaps = 9/138 (6%)

Query: 83  HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLK 141
           H  G+++RD+K +N +  S   +  +K  DFG+  + +  G   +   G+  Y+APE++ 
Sbjct: 118 HRRGIIYRDLKLDNVMLDS---EGHIKIADFGMCKEHMVDGVTTRTFCGTPDYIAPEIIA 174

Query: 142 RKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 200
            +  G   D W+ GV+ Y +L G+ PF  + ED +F+ ++ +   + +    S+S  A  
Sbjct: 175 YQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYPK----SLSKEAVS 230

Query: 201 FVKKLLVKDPRARLTAAQ 218
             K L+ K P  RL    
Sbjct: 231 ICKGLMTKHPSKRLGCGP 248

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. PKC-alpha is expressed in many tissues and is associated with cell proliferation, apoptosis, and cell motility. It plays a role in the signaling of the growth factors PDGF, VEGF, EGF, and FGF. Abnormal levels of PKC-alpha have been detected in many transformed cell lines and several human tumors. In addition, PKC-alpha is required for HER2 dependent breast cancer invasion. Length = 323

>gnl|CDD|173729 cd06617, PKc_MKK3_6, Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

 Score = 62.8 bits (153), Expect = 5e-11
 Identities = 53/162 (32%), Positives = 75/162 (46%), Gaps = 20/162 (12%)

Query: 78  VAAECHLH---GLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAY 133
           V A  +LH    ++HRD+KP N L      +  +K  DFG+S   +    K  D  G   
Sbjct: 113 VKALEYLHSKLSVIHRDVKPSNVL---INRNGQVKLCDFGISGYLVDSVAKTIDA-GCKP 168

Query: 134 YVAPEVLKRKSGPE-----SDVWSIGVITYI-LLCGRRPF--WDKTEDGIFKEVLRNKPD 185
           Y+APE +  +   +     SDVWS+G IT I L  GR P+  W KT     K+V+     
Sbjct: 169 YMAPERINPELNQKGYDVKSDVWSLG-ITMIELATGRFPYDSW-KTPFQQLKQVVEEPSP 226

Query: 186 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
             + P    S   +DFV K L K+ + R    + L HP+   
Sbjct: 227 --QLPAEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFEL 266

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs that phosphorylate and activate their downstream target, p38 MAPK, on specific threonine and tyrosine residues. MKK3/6 plays roles in the regulation of cell cycle progression, cytokine- and stress-induced apoptosis, oncogenic transformation, and adult tissue regeneration. In addition, MKK6 plays a critical role in osteoclast survival in inflammatory disease while MKK3 is associated with tumor invasion, progression, and poor patient survival in glioma. Length = 283

>gnl|CDD|132972 cd06641, STKc_MST3, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

 Score = 62.8 bits (152), Expect = 5e-11
 Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 8/163 (4%)

Query: 65  EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK- 123
           E   A ++R++L+     H    +HRD+K  N L     E   +K  DFG++  +   + 
Sbjct: 100 ETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQI 156

Query: 124 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 182
           K    VG+ +++APEV+K+ +   ++D+WS+G+    L  G  P  +     +   + +N
Sbjct: 157 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKN 216

Query: 183 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
            P      +   S   K+FV+  L K+P  R TA + L H ++
Sbjct: 217 NPPTLEGNY---SKPLKEFVEACLNKEPSFRPTAKELLKHKFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and intrauterine growth retardation. Length = 277

>gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

 Score = 57.6 bits (140), Expect = 5e-11
 Identities = 23/62 (37%), Positives = 38/62 (61%), Gaps = 1/62 (1%)

Query: 272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFV 331
           +LR+ F   D D +G+IS +E++ AL K L   L E  + E+++ +D + DG +DF EF+
Sbjct: 1   ELREAFRLFDKDGDGTISADELKAAL-KSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFL 59

Query: 332 AA 333
             
Sbjct: 60  EL 61

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63

>gnl|CDD|132971 cd06640, STKc_MST4, Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

 Score = 62.4 bits (151), Expect = 6e-11
 Identities = 50/184 (27%), Positives = 88/184 (47%), Gaps = 19/184 (10%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG  LD + A     + E   A +++++L+     H    +HRD+K  N L     E   
Sbjct: 86  GGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLS---EQGD 139

Query: 108 LKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRR 165
           +K  DFG++  +   + K    VG+ +++APEV+++ +   ++D+WS+G+    L  G  
Sbjct: 140 VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEP 199

Query: 166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSI----SNSAKDFVKKLLVKDPRARLTAAQALS 221
           P  D     +   + +N P       P++    S   K+F+   L KDP  R TA + L 
Sbjct: 200 PNSDMHPMRVLFLIPKNNP-------PTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLK 252

Query: 222 HPWV 225
           H ++
Sbjct: 253 HKFI 256

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by interacting with the Golgi matrix protein GM130 and may play a role in cell migration. Length = 277

>gnl|CDD|185503 PTZ00183, PTZ00183, centrin; Provisional

 Score = 59.7 bits (145), Expect = 8e-11
 Identities = 43/155 (27%), Positives = 84/155 (54%), Gaps = 14/155 (9%)

Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           L +++  ++R+ FD  D D +G+I  +E++ A+ + L ++ K+  + +++  +D +  G 
Sbjct: 11  LTEDQKKEIREAFDLFDTDGSGTIDPKELKVAM-RSLGFEPKKEEIKQMIADVDKDGSGK 69

Query: 325 VDFSEFV-AATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEEL-RMHTGLKGSI 382
           +DF EF+   T  +    E D  +  L+   AF  FD D+ G I+ + L R+   L  +I
Sbjct: 70  IDFEEFLDIMTKKLG---ERDPREEILK---AFRLFDDDKTGKISLKNLKRVAKELGETI 123

Query: 383 D-----PLLEEADIDKDGRISLSEFRRLLRTASIS 412
                  +++EAD + DG IS  EF R+++  ++ 
Sbjct: 124 TDEELQEMIDEADRNGDGEISEEEFYRIMKKTNLF 158

Length = 158

>gnl|CDD|173711 cd05621, STKc_ROCK2, Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

 Score = 62.7 bits (152), Expect = 8e-11
 Identities = 53/174 (30%), Positives = 83/174 (47%), Gaps = 14/174 (8%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG+L++ +++  D    EK A     +++      H  GL+HRD+KP+N L     +   
Sbjct: 127 GGDLVN-LMSNYD--VPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLD---KHGH 180

Query: 108 LKATDFGLS-DFIKPGKKFQDI-VGSAYYVAPEVLKRKSGP-----ESDVWSIGVITYIL 160
           LK  DFG      + G    D  VG+  Y++PEVLK + G      E D WS+GV  + +
Sbjct: 181 LKLADFGTCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEM 240

Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 214
           L G  PF+  +  G + +++ +K          IS  AK+ +   L  D   RL
Sbjct: 241 LVGDTPFYADSLVGTYSKIMDHKNSLNFPEDVEISKHAKNLICAFLT-DREVRL 293

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain, heart, and skeletal muscles. It is implicated in vascular and neurological disorders, such as hypertension and vasospasm of the coronary and cerebral arteries. ROCK2 is also activated by caspase-2 cleavage, resulting in thrombin-induced microparticle generation in response to cell activation. Mice deficient in ROCK2 show intrauterine growth retardation and embryonic lethality because of placental dysfunction. Length = 370

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 61.9 bits (150), Expect = 9e-11
 Identities = 52/179 (29%), Positives = 82/179 (45%), Gaps = 29/179 (16%)

Query: 71  VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 130
           ++RQ LR     H + +VHRD+KPEN L  S      +K  DFGL+           +V 
Sbjct: 113 LMRQFLRGLDFLHANCIVHRDLKPENILVTSG---GQVKLADFGLARIYSCQMALTPVVV 169

Query: 131 SAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFW------DK-----------TE 172
           + +Y APEVL + +     D+WS+G I +  +  R+P +      D+            E
Sbjct: 170 TLWYRAPEVLLQSTYATPVDMWSVGCI-FAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 228

Query: 173 DGIFKEVLRNKPDFR-RKPW------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 224
           D   ++V   +  F  R P       P I  S    + ++L  +P  R++A +AL HP+
Sbjct: 229 DDWPRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPF 287

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|238008 cd00051, EFh, EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands

 Score = 56.4 bits (137), Expect = 1e-10
 Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 6/61 (9%)

Query: 353 QAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLL 406
           + AF  FD D DG I+ +EL+      G       ID ++ E D D DG+I   EF  L+
Sbjct: 3   REAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62

Query: 407 R 407
            
Sbjct: 63  A 63

Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers. Length = 63

>gnl|CDD|132977 cd06646, STKc_MAP4K5, Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

 Score = 61.6 bits (149), Expect = 1e-10
 Identities = 55/189 (29%), Positives = 92/189 (48%), Gaps = 23/189 (12%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
           C GG L D  +       +E   A V R+ L+  A  H  G +HRD+K  N L     ++
Sbjct: 88  CGGGSLQD--IYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLT---DN 142

Query: 106 SSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEV--LKRKSGPES--DVWSIGVITYIL 160
             +K  DFG++  I     K +  +G+ Y++APEV  +++  G     D+W++G+    L
Sbjct: 143 GDVKLADFGVAAKITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIEL 202

Query: 161 LCGRRPFWD-KTEDGIFKEVLRNKPDFR------RKPWPSISNSAKDFVKKLLVKDPRAR 213
              + P +D      +F   L +K +F+      +  W   S++  +FVK  L K+P+ R
Sbjct: 203 AELQPPMFDLHPMRALF---LMSKSNFQPPKLKDKTKW---SSTFHNFVKISLTKNPKKR 256

Query: 214 LTAAQALSH 222
            TA + L+H
Sbjct: 257 PTAERLLTH 265

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. MAP4K5, also called germinal center kinase-related enzyme (GCKR), has been shown to activate the MAPK c-Jun N-terminal kinase (JNK). MAP4K5 also facilitates Wnt signaling in B cells, and may therefore be implicated in the control of cell fate, proliferation, and polarity. Length = 267

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 62.4 bits (151), Expect = 1e-10
 Identities = 51/206 (24%), Positives = 88/206 (42%), Gaps = 34/206 (16%)

Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + +++    ++ Q+LR     H  G++HRD+KP N    +  ED  L+  DFGL+  
Sbjct: 111 KCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNV---AVNEDCELRILDFGLAR- 166

Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
            +   +    V + +Y APE++          D+WS+G I   LL G+  F         
Sbjct: 167 -QADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQL 225

Query: 177 KEVLR----NKPDFRRK--------------PWPSISNS---------AKDFVKKLLVKD 209
           K ++       P+  +K                P              A D ++K+LV D
Sbjct: 226 KRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLD 285

Query: 210 PRARLTAAQALSHPWVREGGDASEIP 235
              R++A++AL+HP+  +  D  + P
Sbjct: 286 SDKRISASEALAHPYFSQYHDPEDEP 311

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 61.3 bits (149), Expect = 2e-10
 Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 38/215 (17%)

Query: 45  LCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +    E ++  LA   +    +E+ A + + Q+LR     H   ++HRD+KP N    + 
Sbjct: 91  VYIVQEYMETDLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINT- 149

Query: 103 KEDSSLKATDFGLSDFIKP-----GKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGV 155
            ED  LK  DFGL+  + P     G   + +V + +Y +P +L          D+W+ G 
Sbjct: 150 -EDLVLKIGDFGLARIVDPHYSHKGYLSEGLV-TKWYRSPRLLLSPNNYTKAIDMWAAGC 207

Query: 156 ITYILLCGRRPFWDKTE--------DGI-------FKEVLRNKPDF-------RRKPW-- 191
           I   +L G+  F    E        + +         E+L   P F        R+P   
Sbjct: 208 IFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRD 267

Query: 192 --PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 224
             P ++  A DF++++L  +P  RLTA +AL HP+
Sbjct: 268 LLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPY 302

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 60.8 bits (147), Expect = 3e-10
 Identities = 52/176 (29%), Positives = 79/176 (44%), Gaps = 29/176 (16%)

Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           Q+LR     H H +VHRD+KP+N L  S+ +   +K  DFGL+           +V + +
Sbjct: 118 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVVTLW 174

Query: 134 YVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTED-----GIF----------- 176
           Y APEVL + S     D+WS+G I +  +  R+P +  + D      I            
Sbjct: 175 YRAPEVLLQSSYATPVDLWSVGCI-FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 233

Query: 177 -KEVLRNKPDFRRKPW-------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 224
            ++V   +  F  K           I    KD + K L  +P  R++A  ALSHP+
Sbjct: 234 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPY 289

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|132962 cd06631, STKc_YSK4, Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

 Score = 60.3 bits (146), Expect = 3e-10
 Identities = 45/169 (26%), Positives = 73/169 (43%), Gaps = 28/169 (16%)

Query: 73  RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKF 125
           +Q+L   A  H + +VHRD+K  N +      +  +K  DFG +  +             
Sbjct: 109 KQILDGVAYLHNNCVVHRDIKGNNVMLMP---NGIIKLIDFGCARRLAWVGLHGTHSNML 165

Query: 126 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP 184
           + + G+ Y++APEV+     G +SD+WSIG   + +  G+ P            + R   
Sbjct: 166 KSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPL---------ASMDRLAA 216

Query: 185 DF----RRKPWPSI----SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
            F     R   P +    S +A DFV   L +D   R +A Q L H ++
Sbjct: 217 MFYIGAHRGLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL 265

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Length = 265

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 62.1 bits (150), Expect = 3e-10
 Identities = 57/213 (26%), Positives = 87/213 (40%), Gaps = 29/213 (13%)

Query: 43  IRLCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHL-------HGLVHRDMK 93
           +  C+ G+L   I    K   +  E     + RQ+L   A CH          ++HRD+K
Sbjct: 93  MEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLK 152

Query: 94  PENFLF--------KSAKEDSSL------KATDFGLSDFIKPGKKFQDIVGSAYYVAPEV 139
           P+N           K   + ++L      K  DFGLS  I         VG+ YY +PE+
Sbjct: 153 PQNIFLSTGIRHIGKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPEL 212

Query: 140 LKRKSGP---ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 196
           L  ++     +SD+W++G I Y L  G+ PF            L+  PD    P    S 
Sbjct: 213 LLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLISELKRGPDL---PIKGKSK 269

Query: 197 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGG 229
                +K LL    + R +A Q L +  ++  G
Sbjct: 270 ELNILIKNLLNLSAKERPSALQCLGYQIIKNVG 302

Length = 1021

>gnl|CDD|173730 cd06624, STKc_ASK, Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

 Score = 60.2 bits (146), Expect = 3e-10
 Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 25/166 (15%)

Query: 73  RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGKKFQDIV 129
           +Q+L      H + +VHRD+K +N L  +      +K +DFG S     I P    +   
Sbjct: 115 KQILEGLKYLHDNQIVHRDIKGDNVLVNTYS--GVVKISDFGTSKRLAGINPCT--ETFT 170

Query: 130 GSAYYVAPEVLK---RKSGPESDVWSIGVITYILLCGRRPFWDKTED-------GIFKEV 179
           G+  Y+APEV+    R  G  +D+WS+G     +  G+ PF +  E        G+FK +
Sbjct: 171 GTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKVGMFK-I 229

Query: 180 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
               P+       S+S  AK+F+ +    DP  R +A   L  P++
Sbjct: 230 HPEIPE-------SLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL 268

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4/MKK7 and MKK3/MKK6. It plays important roles in cytokine and stress responses, as well as in reactive oxygen species (ROS)-mediated cellular responses. ASK1 is implicated in various diseases mediated by oxidative stress including inschemic heart disease, hypertension, vessel injury, brain ischemia, Fanconi anemia, asthma, and pulmonary edema, among others. ASK2 (also called MAPKKK6) functions only in a heteromeric complex with ASK1, and can activate ASK1 by direct phosphorylation. The function of MAPKKK15 is still unknown. Length = 268

>gnl|CDD|197581 smart00219, TyrKc, Tyrosine kinase, catalytic domain

 Score = 59.1 bits (144), Expect = 7e-10
 Identities = 38/147 (25%), Positives = 58/147 (39%), Gaps = 40/147 (27%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE-----CHLH--GLVHRDMKPENF 97
             EGG+LL  +   +          + +  +L  A +      +L     +HRD+   N 
Sbjct: 82  YMEGGDLLSYLRKNRP--------KLSLSDLLSFALQIARGMEYLESKNFIHRDLAARNC 133

Query: 98  LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV-----------APEVLK-RKSG 145
           L     E+  +K +DFGLS  +             YY            APE LK  K  
Sbjct: 134 LVG---ENLVVKISDFGLSRDLYDDD---------YYRKRGGKLPIRWMAPESLKEGKFT 181

Query: 146 PESDVWSIGVITY-ILLCGRRPFWDKT 171
            +SDVWS GV+ + I   G +P+   +
Sbjct: 182 SKSDVWSFGVLLWEIFTLGEQPYPGMS 208

Phosphotransferases. Tyrosine-specific kinase subfamily. Length = 257

>gnl|CDD|214568 smart00221, STYKc, Protein kinase; unclassified specificity

 Score = 58.7 bits (143), Expect = 8e-10
 Identities = 38/147 (25%), Positives = 57/147 (38%), Gaps = 39/147 (26%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE-----CHLH--GLVHRDMKPENF 97
              GG+LLD +   +    +       +  +L  A +      +L     +HRD+   N 
Sbjct: 82  YMPGGDLLDYLRKNRPKELS-------LSDLLSFALQIARGMEYLESKNFIHRDLAARNC 134

Query: 98  LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV-----------APEVLK-RKSG 145
           L     E+  +K +DFGLS  +             YY            APE LK  K  
Sbjct: 135 LVG---ENLVVKISDFGLSRDLYDDD---------YYKVKGGKLPIRWMAPESLKEGKFT 182

Query: 146 PESDVWSIGVITY-ILLCGRRPFWDKT 171
            +SDVWS GV+ + I   G  P+   +
Sbjct: 183 SKSDVWSFGVLLWEIFTLGEEPYPGMS 209

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase. Length = 258

>gnl|CDD|173764 cd08224, STKc_Nek6_Nek7, Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

 Score = 59.0 bits (143), Expect = 8e-10
 Identities = 43/153 (28%), Positives = 71/153 (46%), Gaps = 11/153 (7%)

Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF-QDIVGSA 132
           Q+       H   ++HRD+KP N +F +A     +K  D GL  F          +VG+ 
Sbjct: 114 QLCSALEHMHSKRIMHRDIKPAN-VFITA--TGVVKLGDLGLGRFFSSKTTAAHSLVGTP 170

Query: 133 YYVAPEVLKRKSGPE--SDVWSIGVITYILLCGRRPFW-DKTE-DGIFKEVLRNKPDFRR 188
           YY++PE +  ++G    SD+WS+G + Y +   + PF+ DK     + K++   K D+  
Sbjct: 171 YYMSPERI-HENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI--EKCDYPP 227

Query: 189 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 221
            P    S   +D V + +  DP  R   +  L 
Sbjct: 228 LPADHYSEELRDLVSRCINPDPEKRPDISYVLQ 260

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may also be regulators of the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173763 cd08223, STKc_Nek4, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

 Score = 58.4 bits (141), Expect = 1e-09
 Identities = 42/185 (22%), Positives = 82/185 (44%), Gaps = 12/185 (6%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAK 103
            CEGG+L  ++  +K     E        Q+       H   ++HRD+K +N FL ++  
Sbjct: 81  FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRT-- 138

Query: 104 EDSSLKATDFGLSDFIKPGKKFQD-IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILL 161
             + +K  D G++  ++        ++G+ YY++PE+   K    +SDVW++G   Y + 
Sbjct: 139 --NIIKVGDLGIARVLENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMA 196

Query: 162 CGRRPFWDKTEDGIFKEVLRNK-PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
             +  F  K  + +   ++  K P   +   P +     + +  +L K P  R +    L
Sbjct: 197 TLKHAFNAKDMNSLVYRIIEGKLPPMPKDYSPELG----ELIATMLSKRPEKRPSVKSIL 252

Query: 221 SHPWV 225
             P++
Sbjct: 253 RQPYI 257

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown. Length = 257

>gnl|CDD|173765 cd08225, STKc_Nek5, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

 Score = 58.4 bits (141), Expect = 1e-09
 Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 11/184 (5%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKE 104
           C+GG+L+ RI  ++   ++E        Q+       H   ++HRD+K +N FL K+   
Sbjct: 81  CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGM- 139

Query: 105 DSSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC 162
               K  DFG++  +    +     VG+ YY++PE+ + R    ++D+WS+G + Y L  
Sbjct: 140 --VAKLGDFGIARQLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCT 197

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPW-PSISNSAKDFVKKLLVKDPRARLTAAQALS 221
            + PF    E     +++         P  P+ S   +  + +L    PR R +    L 
Sbjct: 198 LKHPF----EGNNLHQLVLKICQGYFAPISPNFSRDLRSLISQLFKVSPRDRPSITSILK 253

Query: 222 HPWV 225
            P++
Sbjct: 254 RPFL 257

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown. Length = 257

>gnl|CDD|173758 cd08218, STKc_Nek1, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

 Score = 58.3 bits (141), Expect = 1e-09
 Identities = 49/188 (26%), Positives = 90/188 (47%), Gaps = 20/188 (10%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKE 104
           CEGG+L  +I A++   + E        Q+       H   ++HRD+K +N FL K    
Sbjct: 81  CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTK---- 136

Query: 105 DSSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC 162
           D ++K  DFG++  +    +  +  +G+ YY++PE+ + R    +SD+W++G + Y +  
Sbjct: 137 DGTIKLGDFGIARVLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCT 196

Query: 163 GRRPFWDKTEDGIFKE-VLRNKPDFRRKPWPSI----SNSAKDFVKKLLVKDPRARLTAA 217
            +  F    E G  K  VL+      R  +P +    S   ++ V +L  ++PR R +  
Sbjct: 197 LKHAF----EAGNMKNLVLK----IIRGSYPPVSSHYSYDLRNLVSQLFKRNPRDRPSVN 248

Query: 218 QALSHPWV 225
             L   ++
Sbjct: 249 SILEKNFI 256

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycystic kidney disease, which is characterized by benign polycystic tumors formed by abnormal overgrowth of renal epithelial cells. It appears also to be involved in DNA damage response, and may be important for both correct DNA damage checkpoint activation and DNA repair. Length = 256

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 58.8 bits (143), Expect = 1e-09
 Identities = 55/219 (25%), Positives = 83/219 (37%), Gaps = 57/219 (26%)

Query: 63  YTEKDAAVVVRQMLRVAAECHLHGL--------VHRDMKPENFLFKS-AKEDSSLKATDF 113
           + +     +   M++      L+G+        +HRD+KP N L      E   +K  D 
Sbjct: 97  HRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDL 156

Query: 114 GLSD-FIKPGKKFQD---IVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF 167
           GL+  F  P K   D   +V + +Y APE+L   R      D+W+IG I   LL     F
Sbjct: 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIF 216

Query: 168 WDKTED-------------GIFK-----------------EVLRNKPDFRRKPWPS---- 193
             +                 IF+                 E      DF+ K +PS    
Sbjct: 217 KGREAKIKKSNPFQRDQLERIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLA 276

Query: 194 ------ISNSAK--DFVKKLLVKDPRARLTAAQALSHPW 224
                     ++  D ++KLL  DP  R+TA +AL HP+
Sbjct: 277 KWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPY 315

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|234389 TIGR03903, TOMM_kin_cyc, TOMM system kinase/cyclase fusion protein

 Score = 59.1 bits (143), Expect = 3e-09
 Identities = 51/166 (30%), Positives = 77/166 (46%), Gaps = 16/166 (9%)

Query: 68  AAVVVRQMLRV---AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 124
           A    R ML+V    A  H  G+VHRD+KP+N +          K  DFG+   + PG +
Sbjct: 78  AGETGRLMLQVLDALACAHNQGIVHRDLKPQNIMVSQTGVRPHAKVLDFGIGTLL-PGVR 136

Query: 125 FQD---------IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG 174
             D         ++G+  Y APE L+ +   P SD+++ G+I    L G+R     +   
Sbjct: 137 DADVATLTRTTEVLGTPTYCAPEQLRGEPVTPNSDLYAWGLIFLECLTGQRVVQGASVAE 196

Query: 175 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           I  + L +  D    PW +  +     ++K L KDPR R  +A AL
Sbjct: 197 ILYQQL-SPVDVSLPPWIA-GHPLGQVLRKALNKDPRQRAASAPAL 240

This model represents proteins of 1350 in length, in multiple species of Burkholderia, in Acidovorax avenae subsp. citrulli AAC00-1 and Delftia acidovorans SPH-1, and in multiple copies in Sorangium cellulosum, in genomic neighborhoods that include a cyclodehydratase/docking scaffold fusion protein (TIGR03882) and a member of the thiazole/oxazole modified metabolite (TOMM) precursor family TIGR03795. It has a kinase domain in the N-terminal 300 amino acids, followed by a cyclase homology domain, followed by regions without named domain definitions. It is a probable bacteriocin-like metabolite biosynthesis protein [Cellular processes, Toxin production and resistance]. Length = 1266

>gnl|CDD|132947 cd06616, PKc_MKK4, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

 Score = 57.4 bits (139), Expect = 3e-09
 Identities = 42/149 (28%), Positives = 70/149 (46%), Gaps = 11/149 (7%)

Query: 85  HGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRK 143
             ++HRD+KP N L      + ++K  DFG+S   +    K +D  G   Y+APE +   
Sbjct: 127 LKIIHRDVKPSNILLD---RNGNIKLCDFGISGQLVDSIAKTRD-AGCRPYMAPERIDPS 182

Query: 144 SGP----ESDVWSIGVITYILLCGRRPF--WDKTEDGIFKEVLRNKPDFRRKPWPSISNS 197
           +       SDVWS+G+  Y +  G+ P+  W+   D + + V  + P          S S
Sbjct: 183 ARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPILSNSEEREFSPS 242

Query: 198 AKDFVKKLLVKDPRARLTAAQALSHPWVR 226
             +F+   L+KD   R    + L HP+++
Sbjct: 243 FVNFINLCLIKDESKRPKYKELLEHPFIK 271

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates the downstream targets, c-Jun N-terminal kinase (JNK) and p38 MAPK, on specific threonine and tyrosine residues. JNK and p38 are collectively known as stress-activated MAPKs, as they are activated in response to a variety of environmental stresses and pro-inflammatory cytokines. Their activation is associated with the induction of cell death. Mice deficient in MKK4 die during embryogenesis and display anemia, severe liver hemorrhage, and abnormal hepatogenesis. MKK4 may also play roles in the immune system and in cardiac hypertrophy. It plays a major role in cancer as a tumor and metastasis suppressor. Under certain conditions, MKK4 is pro-oncogenic. Length = 288

>gnl|CDD|132946 cd06615, PKc_MEK, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

 Score = 57.4 bits (139), Expect = 4e-09
 Identities = 51/181 (28%), Positives = 79/181 (43%), Gaps = 47/181 (25%)

Query: 85  HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI----VGSAYYVAPEVL 140
           H ++HRD+KP N L  S  E   +K  DFG+S     G+    +    VG+  Y++PE L
Sbjct: 119 HKIMHRDVKPSNILVNSRGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERL 170

Query: 141 K-RKSGPESDVWSIGVITYILLCGRRP------------FWDKTEDGIFKEVLR----NK 183
           +      +SD+WS+G+    +  GR P            F     +G  KE  R    + 
Sbjct: 171 QGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSGHP 230

Query: 184 PDFRR-------------KPWPSI-----SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           PD  R             +P P +     S+  +DFV K L K+P+ R    +   HP++
Sbjct: 231 PDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFI 290

Query: 226 R 226
           +
Sbjct: 291 K 291

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the downstream targets, ERK(extracellular signal-regulated kinase) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1/2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. This cascade has also been implicated in synaptic plasticity, migration, morphological determination, and stress response immunological reactions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1/2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 308

>gnl|CDD|183880 PRK13184, pknD, serine/threonine-protein kinase; Reviewed

 Score = 57.9 bits (140), Expect = 6e-09
 Identities = 44/162 (27%), Positives = 72/162 (44%), Gaps = 32/162 (19%)

Query: 83  HLHGLVHRDMKPENFL----------------FKSAKED--SSLKATDFGL--SDFIKPG 122
           H  G++HRD+KP+N L                FK  +E+    +   +  +  S    PG
Sbjct: 130 HSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPG 189

Query: 123 KKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDG---IFKE 178
           K    IVG+  Y+APE L      ES D++++GVI Y +L    P+  + + G    +++
Sbjct: 190 K----IVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPY--RRKKGRKISYRD 243

Query: 179 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           V+ +  +    P+  I         K L  DP  R ++ Q L
Sbjct: 244 VILSPIEV--APYREIPPFLSQIAMKALAVDPAERYSSVQEL 283

Length = 932

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 56.6 bits (136), Expect = 6e-09
 Identities = 51/183 (27%), Positives = 80/183 (43%), Gaps = 35/183 (19%)

Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSA 132
           Q+LR  +  H   ++HRD+KP+N L     E   LK  DFGL+     P   + + V + 
Sbjct: 111 QLLRGLSYIHQRYILHRDLKPQNLLISDTGE---LKLADFGLARAKSVPSHTYSNEVVTL 167

Query: 133 YYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPF--WDKTEDGIFKEVL-------- 180
           +Y  P+VL   +   +  D+W +G I   ++ G   F      +D + +  L        
Sbjct: 168 WYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNED 227

Query: 181 -----RNKPDFR------------RKPWPSIS--NSAKDFVKKLLVKDPRARLTAAQALS 221
                 + P F+            R+ W  +S  N A+D   KLL   P+ RL+A  ALS
Sbjct: 228 TWPGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287

Query: 222 HPW 224
           H +
Sbjct: 288 HEY 290

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|173714 cd05625, STKc_LATS1, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

 Score = 56.9 bits (137), Expect = 7e-09
 Identities = 56/216 (25%), Positives = 85/216 (39%), Gaps = 56/216 (25%)

Query: 63  YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL------- 115
           + E  A   + ++       H  G +HRD+KP+N L      D  +K TDFGL       
Sbjct: 98  FPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILID---RDGHIKLTDFGLCTGFRWT 154

Query: 116 -------------------------------SDFIKP-----GKKFQ-----DIVGSAYY 134
                                           D +KP      ++ Q      +VG+  Y
Sbjct: 155 HDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNY 214

Query: 135 VAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 193
           +APEVL R    +  D WS+GVI Y +L G+ PF  +T      +V+  +      P   
Sbjct: 215 IAPEVLLRTGYTQLCDWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAK 274

Query: 194 ISNSAKDFVKKLLVKDPRARL---TAAQALSHPWVR 226
           +S  A D + K L + P  RL    A +  +HP+ +
Sbjct: 275 LSPEASDLIIK-LCRGPEDRLGKNGADEIKAHPFFK 309

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype and poor prognosis. LATS1 induces G2 arrest and promotes cytokinesis. It may be a component of the mitotic exit network in higher eukaryotes. Length = 382

>gnl|CDD|173624 cd00192, PTKc, Catalytic domain of Protein Tyrosine Kinases

 Score = 55.6 bits (135), Expect = 1e-08
 Identities = 40/156 (25%), Positives = 65/156 (41%), Gaps = 33/156 (21%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC-----HLH--GLVHRDMKPENF 97
             EGG+LLD +   +    + + + + ++ +L  A +      +L     VHRD+   N 
Sbjct: 77  YMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNC 136

Query: 98  LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKS 144
           L     ED  +K +DFGLS  +             YY             APE LK    
Sbjct: 137 LV---GEDLVVKISDFGLSRDVYDDD---------YYRKKTGGKLPIRWMAPESLKDGIF 184

Query: 145 GPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 179
             +SDVWS GV+ + I   G  P+   + + + + +
Sbjct: 185 TSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYL 220

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain, leading to intracellular signaling. Some RTKs are orphan receptors with no known ligands. Non-receptor (or cytoplasmic) tyr kinases are distributed in different intracellular compartments and are usually multi-domain proteins containing a catalytic tyr kinase domain as well as various regulatory domains such as SH3 and SH2. PTKs are usually autoinhibited and require a mechanism for activation. In many PTKs, the phosphorylation of tyr residues in the activation loop is essential for optimal activity. Aberrant expression of PTKs is associated with many development abnormalities and cancers. Length = 262

>gnl|CDD|177557 PHA03209, PHA03209, serine/threonine kinase US3; Provisional

 Score = 56.4 bits (136), Expect = 1e-08
 Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 4/107 (3%)

Query: 56  LAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 115
           L K+        A ++ +Q+L      H   ++HRD+K EN           +   D G 
Sbjct: 147 LTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDV---DQVCIGDLGA 203

Query: 116 SDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILL 161
           + F      F  + G+    APEVL R K   ++D+WS G++ + +L
Sbjct: 204 AQFPVVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEML 250

Length = 357

>gnl|CDD|173715 cd05626, STKc_LATS2, Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

 Score = 56.2 bits (135), Expect = 1e-08
 Identities = 58/238 (24%), Positives = 94/238 (39%), Gaps = 56/238 (23%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG+++  ++  +   + E  A   + ++       H  G +HRD+KP+N L      D  
Sbjct: 85  GGDMMSLLI--RMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDL---DGH 139

Query: 108 LKATDFGL--------------------SDFIKPGKKFQDI------------------- 128
           +K TDFGL                     D ++P   + D+                   
Sbjct: 140 IKLTDFGLCTGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQ 199

Query: 129 ---------VGSAYYVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPFWDKTEDGIFKE 178
                    VG+  Y+APEVL RK   +  D WS+GVI + +L G+ PF   T      +
Sbjct: 200 HQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGVILFEMLVGQPPFLAPTPTETQLK 259

Query: 179 VLRNKPDFRRKPWPSISNSAKDFVKKLL--VKDPRARLTAAQALSHPWVREGGDASEI 234
           V+  +      P   +S  A D + KL    ++   R  A    +HP+  E   +S+I
Sbjct: 260 VINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFFSEVDFSSDI 317

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with poor prognosis in acute lymphoblastic leukemia and breast cancer. Length = 381

>gnl|CDD|173638 cd05065, PTKc_EphR_B, Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

 Score = 55.3 bits (133), Expect = 1e-08
 Identities = 47/181 (25%), Positives = 78/181 (43%), Gaps = 20/181 (11%)

Query: 52  LDRILAKKDSRYTEKDAAVVVRQM---LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 108
           LD  L + D ++T      ++R +   ++  +E +    VHRD+   N L  S   +   
Sbjct: 92  LDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNY---VHRDLAARNILVNS---NLVC 145

Query: 109 KATDFGLSDFIKPGKKFQDIVGS------AYYVAPEVLK-RKSGPESDVWSIGVITY-IL 160
           K +DFGLS F++          S        + APE +  RK    SDVWS G++ + ++
Sbjct: 146 KVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVM 205

Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
             G RP+WD +   +   +   + D+R  P      +    +     KD  AR    Q +
Sbjct: 206 SYGERPYWDMSNQDVINAI---EQDYRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIV 262

Query: 221 S 221
           S
Sbjct: 263 S 263

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion. EphBRs play important roles in synapse formation and plasticity, spine morphogenesis, axon guidance, and angiogenesis. In the intestinal epithelium, EphBRs are Wnt signaling target genes that control cell compartmentalization. They function as suppressors of color cancer progression. Length = 269

>gnl|CDD|133165 cd05033, PTKc_EphR, Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

 Score = 55.0 bits (133), Expect = 2e-08
 Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 16/137 (11%)

Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLR-VAAECHL---HGLVHRDMKPENFLFKSAKEDSS 107
           LD+ L + D ++T       +  MLR +A+          VHRD+   N L  S   +  
Sbjct: 92  LDKFLRENDGKFT----VGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNS---NLV 144

Query: 108 LKATDFGLSDFIKPGKKFQDIVG---SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLC 162
            K +DFGLS  ++  +      G      + APE +  RK    SDVWS G++ + ++  
Sbjct: 145 CKVSDFGLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSY 204

Query: 163 GRRPFWDKTEDGIFKEV 179
           G RP+WD +   + K V
Sbjct: 205 GERPYWDMSNQDVIKAV 221

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. This allows ephrin/EphR dimers to form, leading to the activation of the intracellular tyr kinase domain. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). The main effect of ephrin/EphR interaction is cell-cell repulsion or adhesion. Ephrin/EphR signaling is important in neural development and plasticity, cell morphogenesis and proliferation, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 55.0 bits (132), Expect = 2e-08
 Identities = 52/184 (28%), Positives = 79/184 (42%), Gaps = 37/184 (20%)

Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSA 132
           Q+LR  A  H   ++HRD+KP+N L     E   LK  DFGL+     P + +   V + 
Sbjct: 111 QLLRGLAYIHGQHILHRDLKPQNLLISYLGE---LKLADFGLARAKSIPSQTYSSEVVTL 167

Query: 133 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF-------------WD----KTED 173
           +Y  P+VL          D+W  G I   +L G+  F             W      TED
Sbjct: 168 WYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTED 227

Query: 174 ---GIFKEVLRNKPDFRRKP--------WPSISN--SAKDFVKKLLVKDPRARLTAAQAL 220
              G+ K +   KP++            W  +S    A+D   ++L+  P+ R++A  AL
Sbjct: 228 TWPGVSK-LPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDAL 286

Query: 221 SHPW 224
            HP+
Sbjct: 287 LHPY 290

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 56.0 bits (135), Expect = 2e-08
 Identities = 35/101 (34%), Positives = 53/101 (52%), Gaps = 10/101 (9%)

Query: 128 IVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 186
           I+G+  Y+APE+L  K  GP  D W++GV  +  L G  PF D+T   +F+ +L      
Sbjct: 540 ILGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILN----- 594

Query: 187 RRKPWP----SISNSAKDFVKKLLVKDPRARLTAAQALSHP 223
           R  PWP     +S +A++ ++ LL  DP  R    +   HP
Sbjct: 595 RDIPWPEGEEKLSVNAQNAIEILLTMDPTKRAGLKELKQHP 635

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|173697 cd05606, STKc_beta_ARK, Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

 Score = 54.6 bits (131), Expect = 2e-08
 Identities = 48/159 (30%), Positives = 77/159 (48%), Gaps = 17/159 (10%)

Query: 63  YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKP 121
           ++E +      +++      H   +V+RD+KP N L     E   ++ +D GL+ DF K 
Sbjct: 94  FSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSK- 149

Query: 122 GKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWD-KTEDG--IF 176
            KK    VG+  Y+APEVL++    +S  D +S+G + + LL G  PF   KT+D   I 
Sbjct: 150 -KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEID 208

Query: 177 KEVLRNKPDFRRKPWP-SISNSAKDFVKKLLVKDPRARL 214
           +  L    +      P S S   +  ++ LL +D   RL
Sbjct: 209 RMTLTMAVE-----LPDSFSPELRSLLEGLLQRDVNRRL 242

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is composed of GRK2, GRK3, and similar proteins. GRK2 and GRK3 are both widely expressed in many tissues, although GRK2 is present at higher levels. They contain an N-terminal RGS homology (RH) domain, a central catalytic domain, and C-terminal pleckstrin homology (PH) domain that mediates PIP2 and G protein betagamma-subunit translocation to the membrane. GRK2 (also called beta-ARK or beta-ARK1) is important in regulating several cardiac receptor responses. It plays a role in cardiac development and in hypertension. Deletion of GRK2 in mice results in embryonic lethality, caused by hypoplasia of the ventricular myocardium. GRK2 also plays important roles in the liver (as a regulator of portal blood pressure), in immune cells, and in the nervous system. Altered GRK2 expression has been reported in several disorders including major depression, schizophrenia, bipolar disorder, and Parkinsonism. Length = 278

>gnl|CDD|173722 cd05633, STKc_GRK3, Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

 Score = 54.2 bits (130), Expect = 3e-08
 Identities = 49/156 (31%), Positives = 78/156 (50%), Gaps = 11/156 (7%)

Query: 63  YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKP 121
           ++EK+      +++      H   +V+RD+KP N L     E   ++ +D GL+ DF K 
Sbjct: 94  FSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACDFSK- 149

Query: 122 GKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWD-KTEDGIFKE 178
            KK    VG+  Y+APEVL++ +  +S  D +S+G + + LL G  PF   KT+D    E
Sbjct: 150 -KKPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDK--HE 206

Query: 179 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 214
           + R       +   S S   K  ++ LL +D   RL
Sbjct: 207 IDRMTLTVNVELPDSFSPELKSLLEGLLQRDVSKRL 242

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is widely expressed in many tissues. GRK3-deficient mice show a lack of olfactory receptor desensitization and altered regulation of the M2 muscarinic airway. GRK3 is involved in modulating the cholinergic response of airway smooth muscles. It also plays a role in dopamine receptor regulation. GRK3 promoter polymorphisms may be associated with bipolar disorder. Length = 279

>gnl|CDD|132950 cd06619, PKc_MKK5, Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

 Score = 54.1 bits (130), Expect = 3e-08
 Identities = 43/159 (27%), Positives = 68/159 (42%), Gaps = 24/159 (15%)

Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI--KPGKKFQDIVGSAYYVAPE-VLKRK 143
           ++HRD+KP N L  +  +   +K  DFG+S  +     K +   VG+  Y+APE +   +
Sbjct: 116 ILHRDVKPSNMLVNTRGQ---VKLCDFGVSTQLVNSIAKTY---VGTNAYMAPERISGEQ 169

Query: 144 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP----------DFRRKPWPS 193
            G  SDVWS+G+    L  GR P+       I K      P          D    P   
Sbjct: 170 YGIHSDVWSLGISFMELALGRFPYPQ-----IQKNQGSLMPLQLLQCIVDEDPPVLPVGQ 224

Query: 194 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 232
            S     F+ + + K P+ R      + HP++ +  D +
Sbjct: 225 FSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYNDGN 263

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that phosphorylates its downstream target, extracellular signal-regulated kinase 5 (ERK5), on specific threonine and tyrosine residues. MKK5 is activated by MEKK2 and MEKK3 in response to mitogenic and stress stimuli. The ERK5 cascade promotes cell proliferation, differentiation, neuronal survival, and neuroprotection. This cascade plays an essential role in heart development. Mice deficient in either ERK5 or MKK5 die around embryonic day 10 due to cardiovascular defects including underdevelopment of the myocardium. In addition, MKK5 is associated with metastasis and unfavorable prognosis in prostate cancer. Length = 279

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 54.0 bits (130), Expect = 5e-08
 Identities = 54/235 (22%), Positives = 93/235 (39%), Gaps = 50/235 (21%)

Query: 50  ELLDRILAK---KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 106
           +++   L K   +  R TE     ++ Q+L      H    +HRD+ P N    S     
Sbjct: 100 DIMASDLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGI-- 157

Query: 107 SLKATDFGLS---------------DFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESD 149
             K  DFGL+               + ++  ++    V + +Y APE+L    K     D
Sbjct: 158 -CKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVD 216

Query: 150 VWSIGVITYILLCGRRPF-----------------------W-DKTEDGIFKEVLRNKPD 185
           +WS+G I   LL G+  F                       W    +  ++ E    KP 
Sbjct: 217 MWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPK 276

Query: 186 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG---DASEIPID 237
             +  +P+ S+ A D ++ LL  +P  R++A +AL H + +      D S++P +
Sbjct: 277 DLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDPLPCDPSQLPFN 331

Length = 335

>gnl|CDD|173639 cd05066, PTKc_EphR_A, Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

 Score = 53.4 bits (128), Expect = 5e-08
 Identities = 43/144 (29%), Positives = 66/144 (45%), Gaps = 29/144 (20%)

Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH----GLVHRDMKPENFLFKSAKEDSS 107
           LD  L K D ++T     + +  MLR  A    +    G VHRD+   N L  S   +  
Sbjct: 92  LDAFLRKHDGQFT----VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNS---NLV 144

Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAY----------YVAPEVLK-RKSGPESDVWSIGVI 156
            K +DFGLS      +  +D   +AY          + APE +  RK    SDVWS G++
Sbjct: 145 CKVSDFGLS------RVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIV 198

Query: 157 TY-ILLCGRRPFWDKTEDGIFKEV 179
            + ++  G RP+W+ +   + K +
Sbjct: 199 MWEVMSYGERPYWEMSNQDVIKAI 222

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. EphARs and ephrin-A ligands are expressed in multiple areas of the developing brain, especially in the retina and tectum. They are part of a system controlling retinotectal mapping. Length = 267

>gnl|CDD|173718 cd05629, STKc_NDR_like_fungal, Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

 Score = 53.3 bits (128), Expect = 1e-07
 Identities = 51/206 (24%), Positives = 81/206 (39%), Gaps = 63/206 (30%)

Query: 80  AEC-------HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---------------- 116
           AEC       H  G +HRD+KP+N L         +K +DFGLS                
Sbjct: 108 AECVLAIEAVHKLGFIHRDIKPDNILIDR---GGHIKLSDFGLSTGFHKQHDSAYYQKLL 164

Query: 117 ---------------------------DFIKPGKKFQDI-----VGSAYYVAPEV-LKRK 143
                                      D I   KK + +     VG+  Y+APE+ L++ 
Sbjct: 165 QGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQG 224

Query: 144 SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVK 203
            G E D WS+G I +  L G  PF  +     +++++  +          +S  A+D ++
Sbjct: 225 YGQECDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIR 284

Query: 204 KLLVKDPRARL---TAAQALSHPWVR 226
           +L+  +   RL    A +  SHP+ R
Sbjct: 285 RLIT-NAENRLGRGGAHEIKSHPFFR 309

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of Ace2p activity and cellular morphogenesis) network. CBK1 and Orb6 play similar roles in coordinating cell morphology with cell cycle progression. Ukc1 is involved in morphogenesis, pathogenicity, and pigment formation. Cot1 plays a role in polar tip extension. Length = 377

>gnl|CDD|133194 cd05063, PTKc_EphR_A2, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

 Score = 52.3 bits (125), Expect = 1e-07
 Identities = 49/157 (31%), Positives = 72/157 (45%), Gaps = 21/157 (13%)

Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLR--VAAECHLHGL--VHRDMKPENFLFKSAKEDSS 107
           LD+ L   D  ++    +  +  MLR   A   +L  +  VHRD+   N L  S  E   
Sbjct: 93  LDKYLRDHDGEFS----SYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLE--- 145

Query: 108 LKATDFGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK-RKSGPESDVWSIGVITY-ILL 161
            K +DFGLS  ++  P   +    G     + APE +  RK    SDVWS G++ + ++ 
Sbjct: 146 CKVSDFGLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMS 205

Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 198
            G RP+WD +      EV++   D  R P P    SA
Sbjct: 206 FGERPYWDMSN----HEVMKAINDGFRLPAPMDCPSA 238

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). Ephrin/EphR interaction mainly results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. The EphA2 receptor is overexpressed in tumor cells and tumor blood vessels in a variety of cancers including breast, prostate, lung, and colon. As a result, it is an attractive target for drug design since its inhibition could affect several aspects of tumor progression. Length = 268

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 52.3 bits (125), Expect = 2e-07
 Identities = 52/205 (25%), Positives = 90/205 (43%), Gaps = 32/205 (15%)

Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           Q+ R  A  H   + HRD+KP+N L        +LK  DFG +  +  G++    + S +
Sbjct: 178 QLCRALAYIHSKFICHRDLKPQNLLIDP--NTHTLKLCDFGSAKNLLAGQRSVSYICSRF 235

Query: 134 YVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDK----------------TEDGI 175
           Y APE++   +   +  D+WS+G I   ++ G   F  +                TED +
Sbjct: 236 YRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQL 295

Query: 176 FKEVLRNKPDFR---------RKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
            KE+  N  D +         +K +P    + A +F+ + L  +P  RL   +AL+ P+ 
Sbjct: 296 -KEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFF 354

Query: 226 REGGDAS-EIPIDISVLNNMRQFVK 249
            +  D   ++P  I  L ++  F  
Sbjct: 355 DDLRDPCIKLPKYIDKLPDLFNFCD 379

Length = 440

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 51.2 bits (122), Expect = 4e-07
 Identities = 53/192 (27%), Positives = 76/192 (39%), Gaps = 50/192 (26%)

Query: 83  HLHGLVHRDMKPENFL-FKSAKEDSSLKATDFGLSDF----IKPGKKFQDIVGSAYYVAP 137
           H + ++HRD+KP N L      E   +K  D G +      +KP      +V + +Y AP
Sbjct: 125 HANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP 184

Query: 138 EVL--KRKSGPESDVWSIGVITYILLCGR-------------RPFWDKTEDGIFK----- 177
           E+L   R      D+W+IG I   LL                 PF     D IF      
Sbjct: 185 ELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFP 244

Query: 178 -----EVLRNKP-------DFRRKPWPS-----------ISNSAKDFV--KKLLVKDPRA 212
                E +R  P       DFRR  + +           +   +K F+  +KLL  DP  
Sbjct: 245 ADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTK 304

Query: 213 RLTAAQALSHPW 224
           R+T+ QAL  P+
Sbjct: 305 RITSEQALQDPY 316

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|219530 pfam07714, Pkinase_Tyr, Protein tyrosine kinase

 Score = 50.6 bits (122), Expect = 5e-07
 Identities = 41/148 (27%), Positives = 62/148 (41%), Gaps = 41/148 (27%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE-----CHLH--GLVHRDMKPENF 97
              GG+LLD +    +         + ++ +L++A +      +L     VHRD+   N 
Sbjct: 82  YMPGGDLLDFLRKHGEK--------LTLKDLLQMALQIAKGMEYLESKNFVHRDLAARNC 133

Query: 98  LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKS 144
           L     E+  +K +DFGLS          DI    YY             APE LK  K 
Sbjct: 134 LVT---ENLVVKISDFGLSR---------DIYEDDYYRKRGGGKLPIKWMAPESLKDGKF 181

Query: 145 GPESDVWSIGVITY-ILLCGRRPFWDKT 171
             +SDVWS GV+ + I   G +P+   +
Sbjct: 182 TSKSDVWSFGVLLWEIFTLGEQPYPGMS 209

Length = 258

>gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair

 Score = 46.2 bits (110), Expect = 5e-07
 Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 10/60 (16%)

Query: 357 EKFDIDRDGFITPEELR----------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLL 406
           +  D D DG+I  EELR              ++  I+    E D D DGRIS  EF   +
Sbjct: 1   KLLDKDGDGYIDVEELRKLLKALGLKLTDEEVEELIEADFNEIDKDGDGRISFEEFLEAM 60

Length = 60

>gnl|CDD|173636 cd05057, PTKc_EGFR_like, Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

 Score = 50.5 bits (121), Expect = 5e-07
 Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 8/88 (9%)

Query: 85  HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPE-VL 140
             LVHRD+   N L K+      +K TDFGL+  +   +K     G      ++A E +L
Sbjct: 128 KRLVHRDLAARNVLVKTP---QHVKITDFGLAKLLDVDEKEYHAEGGKVPIKWMALESIL 184

Query: 141 KRKSGPESDVWSIGVITYILLC-GRRPF 167
            R    +SDVWS GV  + L+  G +P+
Sbjct: 185 HRIYTHKSDVWSYGVTVWELMTFGAKPY 212

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, resulting in the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Collectively, they can recognize a variety of ligands including EGF, TGFalpha, and neuregulins, among others. All four subfamily members can form homo- or heterodimers. HER3 contains an impaired kinase domain and depends on its heterodimerization partner for activation. EGFR subfamily members are involved in signaling pathways leading to a broad range of cellular responses including cell proliferation, differentiation, migration, growth inhibition, and apoptosis. Gain of function alterations, through their overexpression, deletions, or point mutations in their kinase domains, have been implicated in various cancers. These receptors are targets of many small molecule inhibitors and monoclonal antibodies used in cancer therapy. Length = 279

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 49.7 bits (118), Expect = 1e-06
 Identities = 50/192 (26%), Positives = 75/192 (39%), Gaps = 50/192 (26%)

Query: 83  HLHGLVHRDMKPENFL-FKSAKEDSSLKATDFGLSDF----IKPGKKFQDIVGSAYYVAP 137
           H + ++HRD+KP N L      E   +K  D G +      +KP      +V + +Y AP
Sbjct: 125 HANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRAP 184

Query: 138 EVL--KRKSGPESDVWSIGVITYILLCGR-------------RPFWDKTEDGIFK----- 177
           E+L   R      D+W+IG I   LL                 P+     D IF      
Sbjct: 185 ELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFP 244

Query: 178 -----EVLRNKP-------DFRRKPWPSIS-------------NSAKDFVKKLLVKDPRA 212
                E ++  P       DFRR  + + S             + A   ++KLL  DP  
Sbjct: 245 ADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIK 304

Query: 213 RLTAAQALSHPW 224
           R+T+ QA+  P+
Sbjct: 305 RITSEQAMQDPY 316

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|227455 COG5126, FRQ1, Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]

 Score = 46.5 bits (111), Expect = 3e-06
 Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 3/74 (4%)

Query: 263 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 322
              D EE  +LR+ F   D D +G IS+ E+R+ L K L  +L +  V ++L+  D + D
Sbjct: 86  KRGDKEE--ELREAFKLFDKDHDGYISIGELRRVL-KSLGERLSDEEVEKLLKEYDEDGD 142

Query: 323 GLVDFSEFVAATLH 336
           G +D+ EF      
Sbjct: 143 GEIDYEEFKKLIKD 156

Length = 160

>gnl|CDD|132980 cd06649, PKc_MEK2, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

 Score = 48.9 bits (116), Expect = 3e-06
 Identities = 42/122 (34%), Positives = 63/122 (51%), Gaps = 8/122 (6%)

Query: 47  EGGELLDRILAKKDSRYTEKDAAVVVRQMLR-VAAECHLHGLVHRDMKPENFLFKSAKED 105
           +GG L D++L K+  R  E+    V   +LR +A     H ++HRD+KP N L  S  E 
Sbjct: 86  DGGSL-DQVL-KEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGE- 142

Query: 106 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGR 164
             +K  DFG+S  +         VG+  Y++PE L+      +SD+WS+G+    L  GR
Sbjct: 143 --IKLCDFGVSGQLIDSMA-NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGR 199

Query: 165 RP 166
            P
Sbjct: 200 YP 201

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK2, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK2, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. Length = 331

>gnl|CDD|173656 cd05111, PTK_HER3, Pseudokinase domain of the Protein Tyrosine Kinase, HER3

 Score = 48.4 bits (115), Expect = 3e-06
 Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 8/88 (9%)

Query: 85  HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPE-VL 140
           H +VHR++   N L KS   DS ++  DFG++D + P  K   + +      ++A E +L
Sbjct: 128 HRMVHRNLAARNILLKS---DSIVQIADFGVADLLYPDDKKYFYSEHKTPIKWMALESIL 184

Query: 141 KRKSGPESDVWSIGVITYILLC-GRRPF 167
             +   +SDVWS GV  + ++  G  P+
Sbjct: 185 FGRYTHQSDVWSYGVTVWEMMSYGAEPY 212

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER3 binds the neuregulin ligands, NRG1 and NRG2. HER3 contains an impaired tyr kinase domain and relies on its heterodimerization partners for activity following ligand binding. The HER2-HER3 heterodimer constitutes a high affinity co-receptor capable of potent mitogenic signaling. HER3 participates in a signaling pathway involved in the proliferation, survival, adhesion, and motility of tumor cells. Length = 279

>gnl|CDD|173637 cd05059, PTKc_Tec_like, Catalytic domain of Tec-like Protein Tyrosine Kinases

 Score = 48.2 bits (115), Expect = 3e-06
 Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 17/106 (16%)

Query: 85  HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAP 137
           +G +HRD+   N L     ED+ +K +DFGL+ ++         G KF        +  P
Sbjct: 119 NGFIHRDLAARNCL---VGEDNVVKVSDFGLARYVLDDQYTSSQGTKF-----PVKWAPP 170

Query: 138 EVLKR-KSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLR 181
           EV    +   +SDVWS GV+ + +   G+ P+   +   + + V  
Sbjct: 171 EVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSA 216

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases form the second largest subfamily of nRTKs and are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. Mutations in Btk cause the severe B-cell immunodeficiency, X-linked agammaglobulinaemia (XLA). Length = 256

>gnl|CDD|132981 cd06650, PKc_MEK1, Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

 Score = 48.1 bits (114), Expect = 5e-06
 Identities = 48/193 (24%), Positives = 75/193 (38%), Gaps = 48/193 (24%)

Query: 85  HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RK 143
           H ++HRD+KP N L  S  E   +K  DFG+S  +         VG+  Y++PE L+   
Sbjct: 123 HKIMHRDVKPSNILVNSRGE---IKLCDFGVSGQLIDSMA-NSFVGTRSYMSPERLQGTH 178

Query: 144 SGPESDVWSIGVITYILLCGRRP------------FWDKTEDGIFKEVLRNKPDFRRKP- 190
              +SD+WS+G+    +  GR P            F    E    +     +P    +P 
Sbjct: 179 YSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRPPGRPL 238

Query: 191 ---------------------------WPSISNSA--KDFVKKLLVKDPRARLTAAQALS 221
                                       PS    A  +DFV K L+K+P  R    Q + 
Sbjct: 239 SSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMV 298

Query: 222 HPWVREGGDASEI 234
           H +++   +A E+
Sbjct: 299 HAFIKR-SEAEEV 310

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downstream targets, extracellular signal-regulated kinase (ERK) 1 and ERK2, on specific threonine and tyrosine residues. The ERK cascade starts with extracellular signals including growth factors, hormones, and neurotransmitters, which act through receptors and ion channels to initiate intracellular signaling that leads to the activation at the MAPKKK (Raf-1 or MOS) level, which leads to the transmission of signals to MEK1, and finally to ERK1/2. The ERK cascade plays an important role in cell proliferation, differentiation, oncogenic transformation, and cell cycle control, as well as in apoptosis and cell survival under certain conditions. Gain-of-function mutations in genes encoding ERK cascade proteins, including MEK1, cause cardiofaciocutaneous (CFC) syndrome, a condition leading to multiple congenital anomalies and mental retardation in patients. MEK1 also plays a role in cell cycle control. Length = 333

>gnl|CDD|173768 cd08228, STKc_Nek6, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

 Score = 47.3 bits (112), Expect = 6e-06
 Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 7/90 (7%)

Query: 83  HLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-GKKFQDIVGSAYYVAPEV 139
           H+H   ++HRD+KP N    +      +K  D GL  F          +VG+ YY++PE 
Sbjct: 121 HMHSRRVMHRDIKPANVFITATGV---VKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPER 177

Query: 140 LKRKS-GPESDVWSIGVITYILLCGRRPFW 168
           +       +SD+WS+G + Y +   + PF+
Sbjct: 178 IHENGYNFKSDIWSLGCLLYEMAALQSPFY 207

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase and anaphase, and to the midbody during cytokinesis. Length = 267

>gnl|CDD|133214 cd05083, PTKc_Chk, Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

 Score = 47.3 bits (112), Expect = 6e-06
 Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 16/114 (14%)

Query: 64  TEKDAAVVVRQMLRVAAEC-----HLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLS 116
           T   A V V Q+L+ + +      +L    LVHRD+   N L     ED   K +DFGL+
Sbjct: 91  TRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNIL---VSEDGVAKVSDFGLA 147

Query: 117 DFIKPGKKFQDIVG-SAYYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRRPF 167
              + G    D       + APE LK +K   +SDVWS GV+ + +   GR P+
Sbjct: 148 ---RVGSMGVDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPY 198

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As a negative regulator of Src kinases, Chk may play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Chk is expressed in brain and hematopoietic cells. Studies in mice reveal that Chk is not functionally redundant with Csk and that it plays an important role as a regulator of immune responses. Chk also plays a role in neural differentiation in a manner independent of Src by enhancing Mapk activation via Ras-mediated signaling. Length = 254

>gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair

 Score = 42.7 bits (101), Expect = 9e-06
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)

Query: 278 DAIDVDKNGSISLEEMRQALAK-DLPWKLKESR--VLEILQAIDCNTDGLVDFSEFVAA 333
             +D D +G I +EE+R+ L    L    +E    +      ID + DG + F EF+ A
Sbjct: 1   KLLDKDGDGYIDVEELRKLLKALGLKLTDEEVEELIEADFNEIDKDGDGRISFEEFLEA 59

Length = 60

>gnl|CDD|173628 cd05038, PTKc_Jak_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

 Score = 46.6 bits (111), Expect = 1e-05
 Identities = 30/94 (31%), Positives = 40/94 (42%), Gaps = 22/94 (23%)

Query: 86  GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV---------- 135
             +HRD+   N L +S   +  +K +DFGL+  +   K +       YYV          
Sbjct: 129 RYIHRDLAARNILVES---EDLVKISDFGLAKVLPEDKDY-------YYVKEPGESPIFW 178

Query: 136 -APEVLK-RKSGPESDVWSIGVITYILLCGRRPF 167
            APE L+  K    SDVWS GV  Y L     P 
Sbjct: 179 YAPECLRTSKFSSASDVWSFGVTLYELFTYGDPS 212

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jaks are also involved in regulating the surface expression of some cytokine receptors. The Jak-STAT pathway is involved in many biological processes including hematopoiesis, immunoregulation, host defense, fertility, lactation, growth, and embryogenesis. Length = 284

>gnl|CDD|173769 cd08229, STKc_Nek7, Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

 Score = 46.6 bits (110), Expect = 1e-05
 Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 7/130 (5%)

Query: 43  IRLCEGGEL--LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 100
           + L + G+L  + +   K+     EK       Q+       H   ++HRD+KP N    
Sbjct: 81  LELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT 140

Query: 101 SAKEDSSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITY 158
           +      +K  D GL  F          +VG+ YY++PE +       +SD+WS+G + Y
Sbjct: 141 AT---GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLY 197

Query: 159 ILLCGRRPFW 168
            +   + PF+
Sbjct: 198 EMAALQSPFY 207

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase. Length = 267

>gnl|CDD|173630 cd05044, PTKc_c-ros, Catalytic domain of the Protein Tyrosine Kinase, C-ros

 Score = 46.4 bits (110), Expect = 1e-05
 Identities = 44/147 (29%), Positives = 65/147 (44%), Gaps = 32/147 (21%)

Query: 43  IRLCEGGELLDRIL-AKKDSRYTEKDAAVVVRQM-LRVAAECH----LHGLVHRDMKPEN 96
           + L EGG+LL  +  A+ +           +  + L VA  C     +H  +HRD+   N
Sbjct: 78  MELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH-FIHRDLAARN 136

Query: 97  FLFKSAKEDSS--LKATDFGLSDFIKPGKKFQDIVGSAYY------------VAPEVL-K 141
            L      D+   +K  DFGL+         +DI  S YY            +APE L  
Sbjct: 137 CLVSEKGYDADRVVKIGDFGLA---------RDIYKSDYYRKEGEGLLPVRWMAPESLLD 187

Query: 142 RKSGPESDVWSIGVITY-ILLCGRRPF 167
            K   +SDVWS GV+ + IL  G++P+
Sbjct: 188 GKFTTQSDVWSFGVLMWEILTLGQQPY 214

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male mice bearing inactive mutations of c-ros lack the initial segment of the epididymis and are infertile. The Drosophila protein, Sevenless, is required for the specification of the R7 photoreceptor cell during eye development. Length = 269

>gnl|CDD|173648 cd05092, PTKc_TrkA, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

 Score = 45.8 bits (108), Expect = 2e-05
 Identities = 36/116 (31%), Positives = 55/116 (47%), Gaps = 33/116 (28%)

Query: 74  QMLRVAAE-----CHLHGL--VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 126
           QML +A++      +L  L  VHRD+   N L     +   +K  DFG+S         +
Sbjct: 123 QMLAIASQIASGMVYLASLHFVHRDLATRNCL---VGQGLVVKIGDFGMS---------R 170

Query: 127 DIVGSAYY------------VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFW 168
           DI  + YY            + PE +L RK   ESD+WS GV+ + I   G++P++
Sbjct: 171 DIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWY 226

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory and sympathetic neurons of the peripheral nervous system, and in basal forebrain cholinergic neurons of the central nervous system. It is critical for neuronal growth, differentiation and survival. Alternative TrkA splicing has been implicated as a pivotal regulator of neuroblastoma (NB) behavior. Normal TrkA expression is associated with better NB prognosis, while the hypoxia-regulated TrkAIII splice variant promotes NB pathogenesis and progression. Aberrant TrkA expression has also been demonstrated in non-neural tumors including prostate, breast, lung, and pancreatic cancers. Length = 280

>gnl|CDD|133199 cd05068, PTKc_Frk_like, Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

 Score = 44.7 bits (106), Expect = 3e-05
 Identities = 52/180 (28%), Positives = 73/180 (40%), Gaps = 43/180 (23%)

Query: 30  PMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC------- 82
           P+ IV  L K         G LL+  L     R      A+ + Q++ +AA+        
Sbjct: 75  PIYIVTELMK--------YGSLLE-YLQGGAGR------ALKLPQLIDMAAQVASGMAYL 119

Query: 83  HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-------PGKKFQDIVGSAYYV 135
                +HRD+   N L     E++  K  DFGL+  IK        G KF        + 
Sbjct: 120 EAQNYIHRDLAARNVL---VGENNICKVADFGLARVIKEDIYEAREGAKF-----PIKWT 171

Query: 136 APE-VLKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 193
           APE  L  +   +SDVWS G+ +T I+  GR P+   T      EVL+      R P P 
Sbjct: 172 APEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN----AEVLQQVDQGYRMPCPP 227

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Frk, also known as Rak, is specifically expressed in liver, lung, kidney, intestine, mammary glands, and the islets of Langerhans. Rodent homologs were previously referred to as GTK (gastrointestinal tyr kinase), BSK (beta-cell Src-like kinase), or IYK (intestinal tyr kinase). Studies in mice reveal that Frk is not essential for viability. It plays a role in the signaling that leads to cytokine-induced beta-cell death in Type I diabetes. It also regulates beta-cell number during embryogenesis and early in life. Length = 261

>gnl|CDD|173644 cd05079, PTKc_Jak1_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

 Score = 44.9 bits (106), Expect = 4e-05
 Identities = 30/79 (37%), Positives = 42/79 (53%), Gaps = 8/79 (10%)

Query: 88  VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF----QDIVGSAYYVAPEVL-KR 142
           VHRD+   N L +S   +  +K  DFGL+  I+  K++     D+    ++ APE L + 
Sbjct: 131 VHRDLAARNVLVES---EHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQS 187

Query: 143 KSGPESDVWSIGVITYILL 161
           K    SDVWS GV  Y LL
Sbjct: 188 KFYIASDVWSFGVTLYELL 206

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak1 is widely expressed in many tissues. Many cytokines are dependent on Jak1 for signaling, including those that use the shared receptor subunits common gamma chain (IL-2, IL-4, IL-7, IL-9, IL-15, IL-21) and gp130 (IL-6, IL-11, oncostatin M, G-CSF, and IFNs, among others). The many varied interactions of Jak1 and its ubiquitous expression suggest many biological roles. Jak1 is important in neurological development, as well as in lymphoid development and function. It also plays a role in the pathophysiology of cardiac hypertrophy and heart failure. A mutation in the ATP-binding site of Jak1 was identified in a human uterine leiomyosarcoma cell line, resulting in defective cytokine induction and antigen presentation, thus allowing the tumor to evade the immune system. Length = 284

>gnl|CDD|133243 cd05112, PTKc_Itk, Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

 Score = 44.2 bits (104), Expect = 5e-05
 Identities = 26/98 (26%), Positives = 52/98 (53%), Gaps = 9/98 (9%)

Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV---APEVLK-R 142
           ++HRD+   N L     E+  +K +DFG++ F+    ++    G+ + V   +PEV    
Sbjct: 121 VIHRDLAARNCL---VGENQVVKVSDFGMTRFVL-DDQYTSSTGTKFPVKWSSPEVFSFS 176

Query: 143 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 179
           K   +SDVWS GV+ + +   G+ P+ +++   + + +
Sbjct: 177 KYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETI 214

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Itk contains the Tec homology (TH) domain containing one proline-rich region and a zinc-binding region. Tec kinases are expressed mainly by haematopoietic cells. Itk is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, Itk plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, Itk is crucial for the development of T-helper(Th)2 effector responses. Length = 256

>gnl|CDD|133211 cd05080, PTKc_Tyk2_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

 Score = 43.7 bits (103), Expect = 8e-05
 Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 8/94 (8%)

Query: 73  RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF----QDI 128
           +Q+    A  H    +HRD+   N L  +   D  +K  DFGL+  +  G ++    +D 
Sbjct: 114 QQICEGMAYLHSQHYIHRDLAARNVLLDN---DRLVKIGDFGLAKAVPEGHEYYRVREDG 170

Query: 129 VGSAYYVAPEVLKR-KSGPESDVWSIGVITYILL 161
               ++ A E LK  K    SDVWS GV  Y LL
Sbjct: 171 DSPVFWYAVECLKENKFSYASDVWSFGVTLYELL 204

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Tyk2 is widely expressed in many tissues. It is involved in signaling via the cytokine receptors IFN-alphabeta, IL-6, IL-10, IL-12, IL-13, and IL-23. It mediates cell surface urokinase receptor (uPAR) signaling and plays a role in modulating vascular smooth muscle cell (VSMC) functional behavior in response to injury. Tyk2 is also important in dendritic cell function and T helper (Th)1 cell differentiation. A homozygous mutation of Tyk2 was found in a patient with hyper-IgE syndrome (HIES), a primary immunodeficiency characterized by recurrent skin abscesses, pneumonia, and elevated serum IgE. This suggests that Tyk2 may play important roles in multiple cytokine signaling involved in innate and adaptive immunity. Length = 283

>gnl|CDD|165478 PHA03212, PHA03212, serine/threonine kinase US3; Provisional

 Score = 44.2 bits (104), Expect = 9e-05
 Identities = 37/118 (31%), Positives = 56/118 (47%), Gaps = 20/118 (16%)

Query: 67  DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 126
           D   + R +LR     H + ++HRD+K EN +F +   D  L   DFG + F  P     
Sbjct: 183 DILAIERSVLRAIQYLHENRIIHRDIKAEN-IFINHPGDVCLG--DFGAACF--P----V 233

Query: 127 DIVGSAYY--------VAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGI 175
           DI  + YY         APE+L R   GP  D+WS G++ + +       ++K  DG+
Sbjct: 234 DINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEK--DGL 289

Length = 391

>gnl|CDD|173657 cd05113, PTKc_Btk_Bmx, Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

 Score = 43.3 bits (102), Expect = 9e-05
 Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 9/88 (10%)

Query: 85  HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV---APEVLK 141
              +HRD+   N L         +K +DFGLS ++    ++   VGS + V    PEVL 
Sbjct: 119 KQFIHRDLAARNCLVDD---QGCVKVSDFGLSRYVL-DDEYTSSVGSKFPVRWSPPEVLL 174

Query: 142 R-KSGPESDVWSIGVITY-ILLCGRRPF 167
             K   +SDVW+ GV+ + +   G+ P+
Sbjct: 175 YSKFSSKSDVWAFGVLMWEVYSLGKMPY 202

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, Btk contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Btk is expressed in B-cells, and a variety of myeloid cells including mast cells, platelets, neutrophils, and dendrictic cells. It interacts with a variety of partners, from cytosolic proteins to nuclear transcription factors, suggesting a diversity of functions. Stimulation of a diverse array of cell surface receptors, including antigen engagement of the B-cell receptor (BCR), leads to PH-mediated membrane translocation of Btk and subsequent phosphorylation by Src kinase and activation. Btk plays an important role in the life cycle of B-cells including their development, differentiation, proliferation, survival, and apoptosis. Mutations in Btk cause the primary immunodeficiency disease, X-linked agammaglobulinaemia (XLA) in humans. Bmx is primarily expressed in bone marrow and the arterial endothelium, and plays an important role in ischemia-induced angiogenesis. It facilitates arterial growth, capillary formation, vessel maturation, and bone marrow-derived endothelial progenitor cell mobilization. Length = 256

>gnl|CDD|133213 cd05082, PTKc_Csk, Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

 Score = 43.4 bits (102), Expect = 1e-04
 Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 9/84 (10%)

Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG-SAYYVAPEVLKRKS- 144
            VHRD+   N L     ED+  K +DFGL+   K     QD       + APE L+ K  
Sbjct: 123 FVHRDLAARNVL---VSEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREKKF 176

Query: 145 GPESDVWSIGVITY-ILLCGRRPF 167
             +SDVWS G++ + I   GR P+
Sbjct: 177 STKSDVWSFGILLWEIYSFGRVPY 200

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Csk is expressed in a wide variety of tissues. As a negative regulator of Src, Csk plays a role in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. In addition, Csk also shows Src-independent functions. It is a critical component in G-protein signaling, and plays a role in cytoskeletal reorganization and cell migration. Length = 256

>gnl|CDD|173640 cd05067, PTKc_Lck_Blk, Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

 Score = 42.9 bits (101), Expect = 1e-04
 Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 21/114 (18%)

Query: 88  VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-------GKKFQDIVGSAYYVAPEVL 140
           +HRD++  N L     E    K  DFGL+  I+        G KF        + APE +
Sbjct: 124 IHRDLRAANIL---VSETLCCKIADFGLARLIEDNEYTAREGAKF-----PIKWTAPEAI 175

Query: 141 KRKS-GPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 192
              +   +SDVWS G+ +T I+  GR P+   T      EV++N     R P P
Sbjct: 176 NYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN----PEVIQNLERGYRMPRP 225

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Lck is expressed in T-cells and natural killer (NK) cells. It plays a critical role in T-cell maturation, activation, and T-cell receptor (TCR) signaling. Lck phosphorylates ITAM (immunoreceptor tyr activation motif) sequences on several subunits of TCRs, leading to the activation of different second messenger cascades. Phosphorylated ITAMs serve as binding sites for other signaling factor such as Syk and ZAP-70, leading to their activation and propagation of downstream events. In addition, Lck regulates drug-induced apoptosis by interfering with the mitochondrial death pathway. The apototic role of Lck is independent of its primary function in T-cell signaling. Blk is expressed specifically in B-cells. It is involved in pre-BCR (B-cell receptor) signaling. Length = 260

>gnl|CDD|173701 cd05610, STKc_MASTL, Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

 Score = 43.3 bits (102), Expect = 2e-04
 Identities = 17/34 (50%), Positives = 24/34 (70%), Gaps = 3/34 (8%)

Query: 83  HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS 116
           H HG++HRD+KP+N L  +   +  +K TDFGLS
Sbjct: 121 HRHGIIHRDLKPDNMLISN---EGHIKLTDFGLS 151

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ14813 is associated with autosomal dominant thrombocytopenia. To date, the function of MASTL is unknown. Length = 669

>gnl|CDD|223009 PHA03211, PHA03211, serine/threonine kinase US3; Provisional

 Score = 43.3 bits (102), Expect = 2e-04
 Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 7/94 (7%)

Query: 69  AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---F 125
             V RQ+L      H  G++HRD+K EN +  +  ED  L   DFG + F +        
Sbjct: 263 TAVARQLLSAIDYIHGEGIIHRDIKTEN-VLVNGPEDICLG--DFGAACFARGSWSTPFH 319

Query: 126 QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITY 158
             I G+    APEVL      P  D+WS G++ +
Sbjct: 320 YGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIF 353

Length = 461

>gnl|CDD|173654 cd05108, PTKc_EGFR, Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

 Score = 43.1 bits (101), Expect = 2e-04
 Identities = 38/114 (33%), Positives = 54/114 (47%), Gaps = 14/114 (12%)

Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPE-VLKR 142
           LVHRD+   N L K+ +    +K TDFGL+  +   +K     G      ++A E +L R
Sbjct: 130 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGADEKEYHAEGGKVPIKWMALESILHR 186

Query: 143 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI-FKEVLRNKPDFRRKPWPSI 194
               +SDVWS GV  + L+  G +P+     DGI   E+        R P P I
Sbjct: 187 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGIPASEISSILEKGERLPQPPI 235

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands for EGFR include EGF, heparin binding EGF-like growth factor (HBEGF), epiregulin, amphiregulin, TGFalpha, and betacellulin. Upon ligand binding, EGFR can form homo- or heterodimers with other EGFR subfamily members. The EGFR signaling pathway is one of the most important pathways regulating cell proliferation, differentiation, survival, and growth. Overexpression and mutation in the kinase domain of EGFR have been implicated in the development and progression of a variety of cancers. A number of monoclonal antibodies and small molecule inhibitors have been developed that target EGFR, including the antibodies Cetuximab and Panitumumab, which are used in combination with other therapies for the treatment of colorectal cancer and non-small cell lung carcinoma (NSCLC). The small molecule inhibitors Gefitinib (Iressa) and Erlotinib (Tarceva), already used for NSCLC, are undergoing clinical trials for other types of cancer including gastrointestinal, breast, head and neck, and bladder. Length = 316

>gnl|CDD|173625 cd05032, PTKc_InsR_like, Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

 Score = 42.7 bits (101), Expect = 2e-04
 Identities = 34/131 (25%), Positives = 58/131 (44%), Gaps = 33/131 (25%)

Query: 74  QMLRVAAE-----CHLHGL--VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 126
           + +++AAE      +L     VHRD+   N +     ED ++K  DFG++         +
Sbjct: 120 KFIQMAAEIADGMAYLAAKKFVHRDLAARNCM---VAEDLTVKIGDFGMT---------R 167

Query: 127 DIVGSAYY------------VAPEVLKR-KSGPESDVWSIGVITY-ILLCGRRPFWDKTE 172
           DI  + YY            +APE LK      +SDVWS GV+ + +     +P+   + 
Sbjct: 168 DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN 227

Query: 173 DGIFKEVLRNK 183
           + + K V+   
Sbjct: 228 EEVLKFVIDGG 238

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR and IGF-1R, which share 84% sequence identity in their kinase domains, display physiologically distinct yet overlapping functions in cell growth, differentiation, and metabolism. InsR activation leads primarily to metabolic effects while IGF-1R activation stimulates mitogenic pathways. In cells expressing both receptors, InsR/IGF-1R hybrids are found together with classical receptors. Both receptors can interact with common adaptor molecules such as IRS-1 and IRS-2. Length = 277

>gnl|CDD|173655 cd05110, PTKc_HER4, Catalytic domain of the Protein Tyrosine Kinase, HER4

 Score = 42.7 bits (100), Expect = 2e-04
 Identities = 41/116 (35%), Positives = 55/116 (47%), Gaps = 18/116 (15%)

Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-R 142
           LVHRD+   N L KS    + +K TDFGL+  ++  +K  +  G      ++A E +  R
Sbjct: 130 LVHRDLAARNVLVKSP---NHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYR 186

Query: 143 KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF----RRKPWPSI 194
           K   +SDVWS GV  + L+     F  K  DGI     R  PD      R P P I
Sbjct: 187 KFTHQSDVWSYGVTIWELMT----FGGKPYDGI---PTREIPDLLEKGERLPQPPI 235

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. Ligands that bind HER4 fall into two groups, the neuregulins (or heregulins) and some EGFR (HER1) ligands including betacellulin, HBEGF, and epiregulin. All four neuregulins (NRG1-4) interact with HER4. Upon ligand binding, HER4 forms homo- or heterodimers with other HER proteins. HER4 is essential in embryonic development. It is implicated in mammary gland, cardiac, and neural development. As a postsynaptic receptor of NRG1, HER4 plays an important role in synaptic plasticity and maturation. The impairment of NRG1/HER4 signaling may contribute to schizophrenia. Length = 303

>gnl|CDD|204523 pfam10591, SPARC_Ca_bdg, Secreted protein acidic and rich in cysteine Ca binding region

 Score = 40.4 bits (95), Expect = 2e-04
 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 8/79 (10%)

Query: 334 TLHVHQLEEHDSEK-WHLRSQAAFEKF---DIDRDGFITPEELR-MHTGLKGS---IDPL 385
             H  +L + D +K + +        F   D + DG+++  EL  +   L      I P 
Sbjct: 33  VDHYSELLKRDEQKNYPMCKDPLGWMFNQLDTNHDGYLSRSELAPLRAPLVPMEHCIKPF 92

Query: 386 LEEADIDKDGRISLSEFRR 404
            +  D DKDG ISL E+ +
Sbjct: 93  FKSCDADKDGLISLREWCK 111

The SPARC_Ca_bdg domain of Secreted Protein Acidic and Rich in Cysteine is responsible for the anti-spreading activity of human urothelial cells. It is rich in alpha-helices. This extracellular calcium-binding domain contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2. Length = 112

>gnl|CDD|238155 cd00252, SPARC_EC, SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP)

 Score = 40.1 bits (94), Expect = 2e-04
 Identities = 22/80 (27%), Positives = 31/80 (38%), Gaps = 2/80 (2%)

Query: 324 LVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR--MHTGLKGS 381
             D  E      H  +L++             F + D + DG ++  EL        +  
Sbjct: 22  HEDLKERDELEKHKLRLKKSLYPMCKDPVGWMFNQLDGNYDGKLSHHELAPIRLDPNEHC 81

Query: 382 IDPLLEEADIDKDGRISLSE 401
           I P  E  D+DKDG ISL E
Sbjct: 82  IKPFFESCDLDKDGSISLDE 101

SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules. Length = 116

>gnl|CDD|133240 cd05109, PTKc_HER2, Catalytic domain of the Protein Tyrosine Kinase, HER2

 Score = 41.9 bits (98), Expect = 3e-04
 Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 8/86 (9%)

Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 142
           LVHRD+   N L KS    + +K TDFGL+  +   +      G      +     +L R
Sbjct: 130 LVHRDLAARNVLVKSP---NHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILHR 186

Query: 143 KSGPESDVWSIGVITYILLC-GRRPF 167
           +   +SDVWS GV  + L+  G +P+
Sbjct: 187 RFTHQSDVWSYGVTVWELMTFGAKPY 212

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as binding sites for downstream signaling molecules. HER2 does not bind to any known EGFR subfamily ligands, but contributes to the kinase activity of all possible heterodimers. It acts as the preferred partner with other ligand-bound EGFR proteins and functions as a signal amplifier, with the HER2-HER3 heterodimer being the most potent pair in mitogenic signaling. HER2 plays an important role in cell development, proliferation, survival and motility. Overexpression of HER2 results in its activation and downstream signaling, even in the absence of ligand. HER2 overexpression, mainly due to gene amplification, has been shown in a variety of human cancers. Its role in breast cancer is especially well-documented. HER2 is up-regulated in about 25% of breast tumors and is associated with increases in tumor aggressiveness, recurrence and mortality. HER2 is a target for monoclonal antibodies and small molecule inhibitors, which are being developed as treatments for cancer. The first humanized antibody approved for clinical use is Trastuzumab (Herceptin), which is being used in combination with other therapies to improve the survival rates of patients with HER2-overexpressing breast cancer. Length = 279

>gnl|CDD|222407 pfam13833, EF_hand_6, EF-hand domain pair

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 6/50 (12%)

Query: 364 DGFITPEELRM---HTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 407
            G IT EEL+      G+  S   +D L  E D D DG+IS  EF  LL+
Sbjct: 2   KGLITREELKRALALLGISLSEEEVDILFREFDTDGDGKISFEEFCVLLQ 51

Length = 53

>gnl|CDD|133171 cd05039, PTKc_Csk_like, Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

 Score = 41.6 bits (98), Expect = 4e-04
 Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 9/84 (10%)

Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG-SAYYVAPEVLK-RKS 144
            VHRD+   N L     ED   K +DFGL+   K   + QD       + APE L+ +K 
Sbjct: 123 FVHRDLAARNVLVS---EDLVAKVSDFGLA---KEASQGQDSGKLPVKWTAPEALREKKF 176

Query: 145 GPESDVWSIGVITY-ILLCGRRPF 167
             +SDVWS G++ + I   GR P+
Sbjct: 177 STKSDVWSFGILLWEIYSFGRVPY 200

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, resulting in their inactivation. Chk inhibit Src kinases using a noncatalytic mechanism by simply binding to them. As negative regulators of Src kinases, Csk and Chk play important roles in cell proliferation, survival, and differentiation, and consequently, in cancer development and progression. Length = 256

>gnl|CDD|133179 cd05048, PTKc_Ror, Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

 Score = 41.7 bits (98), Expect = 4e-04
 Identities = 32/98 (32%), Positives = 46/98 (46%), Gaps = 26/98 (26%)

Query: 85  HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY---------- 134
           H  VHRD+   N L     E  ++K +DFGLS         +DI  + YY          
Sbjct: 143 HHFVHRDLAARNCL---VGEGLTVKISDFGLS---------RDIYSADYYRVQSKSLLPV 190

Query: 135 --VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFW 168
             + PE +L  K   ESD+WS GV+ + I   G +P++
Sbjct: 191 RWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYY 228

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. Ror kinases are expressed in many tissues during development. They play important roles in bone and heart formation. Mutations in human Ror2 result in two different bone development genetic disorders, recessive Robinow syndrome and brachydactyly type B. Drosophila Ror is expressed only in the developing nervous system during neurite outgrowth and neuronal differentiation, suggesting a role for Drosophila Ror in neural development. More recently, mouse Ror1 and Ror2 have also been found to play an important role in regulating neurite growth in central neurons. Ror1 and Ror2 are believed to have some overlapping and redundant functions. Length = 283

>gnl|CDD|173649 cd05093, PTKc_TrkB, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

 Score = 41.6 bits (97), Expect = 4e-04
 Identities = 32/120 (26%), Positives = 57/120 (47%), Gaps = 26/120 (21%)

Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY------------ 134
            VHRD+   N L     E+  +K  DFG+S         +D+  + YY            
Sbjct: 141 FVHRDLATRNCL---VGENLLVKIGDFGMS---------RDVYSTDYYRVGGHTMLPIRW 188

Query: 135 VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 192
           + PE ++ RK   ESDVWS+GV+ + I   G++P++  + + + + + + +   R +  P
Sbjct: 189 MPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCP 248

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly expressed in the nervous system and in some non-neural tissues. It plays important roles in cell proliferation, differentiation, and survival. BDNF/Trk signaling plays a key role in regulating activity-dependent synaptic plasticity. TrkB also contributes to protection against gp120-induced neuronal cell death. TrkB overexpression is associated with poor prognosis in neuroblastoma (NB) and other human cancers. It acts as a suppressor of anoikis (detachment-induced apoptosis) and contributes to tumor metastasis. Length = 288

>gnl|CDD|133212 cd05081, PTKc_Jak2_Jak3_rpt2, Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

 Score = 41.7 bits (98), Expect = 4e-04
 Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 8/78 (10%)

Query: 88  VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIV----GSAYYVAPEVL-KR 142
           VHRD+   N L +S   ++ +K  DFGL+  +   K++  +        ++ APE L + 
Sbjct: 130 VHRDLATRNILVES---ENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFWYAPESLTES 186

Query: 143 KSGPESDVWSIGVITYIL 160
           K    SDVWS GV+ Y L
Sbjct: 187 KFSVASDVWSFGVVLYEL 204

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers and activators of transcription (STATs). Jak2 is widely expressed in many tissues while Jak3 is expressed only in hematopoietic cells. Jak2 is essential for the signaling of hormone-like cytokines such as growth hormone, erythropoietin, thrombopoietin, and prolactin, as well as some IFNs and cytokines that signal through the IL-3 and gp130 receptors. Jak3 binds the shared receptor subunit common gamma chain and thus, is essential in the signaling of cytokines that use it such as IL-2, IL-4, IL-7, IL-9, IL-15, and IL-21. Disruption of Jak2 in mice results in an embryonic lethal phenotype with multiple defects including erythropoietic and cardiac abnormalities. It is the only Jak gene that results in a lethal phenotype when disrupted in mice. A mutation in the pseudokinase domain of Jak2, V617F, is present in many myeloproliferative diseases, including almost all patients with polycythemia vera, and 50% of patients with essential thrombocytosis and myelofibrosis. Jak3 is important in lymphoid development and myeloid cell differentiation. Inactivating mutations in Jak3 have been reported in humans with severe combined immunodeficiency (SCID). Length = 284

>gnl|CDD|205383 pfam13202, EF_hand_3, EF hand

 Score = 36.9 bits (87), Expect = 4e-04
 Identities = 9/21 (42%), Positives = 14/21 (66%)

Query: 353 QAAFEKFDIDRDGFITPEELR 373
           +  F +FD + DG I+ EEL+
Sbjct: 2   KDLFRQFDTNGDGKISKEELK 22

Length = 25

>gnl|CDD|133180 cd05049, PTKc_Trk, Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

 Score = 41.3 bits (97), Expect = 5e-04
 Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 26/95 (27%)

Query: 88  VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY------------V 135
           VHRD+   N L      D  +K  DFG+S         +D+  + YY            +
Sbjct: 144 VHRDLATRNCL---VGYDLVVKIGDFGMS---------RDVYTTDYYRVGGHTMLPIRWM 191

Query: 136 APE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFW 168
            PE ++ RK   ESDVWS GV+ + I   G++P++
Sbjct: 192 PPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWY 226

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalytic domain. Trk receptors are mainly expressed in the peripheral and central nervous systems. They play important roles in cell fate determination, neuronal survival and differentiation, as well as in the regulation of synaptic plasticity. Altered expression of Trk receptors is associated with many human diseases. Length = 280

>gnl|CDD|205583 pfam13405, EF_hand_4, EF-hand domain

 Score = 36.8 bits (86), Expect = 5e-04
 Identities = 13/28 (46%), Positives = 18/28 (64%)

Query: 272 DLRDQFDAIDVDKNGSISLEEMRQALAK 299
           +LR+ F   D D +G IS EE+R+AL  
Sbjct: 1   ELREAFKLFDKDGDGYISAEELRKALRS 28

Length = 30

>gnl|CDD|133191 cd05060, PTKc_Syk_like, Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

 Score = 40.8 bits (96), Expect = 8e-04
 Identities = 35/124 (28%), Positives = 45/124 (36%), Gaps = 26/124 (20%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L   G LL  +  KK       D   +  Q+    A       VHRD+   N L  +   
Sbjct: 76  LAPLGPLLKYL--KKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVN--- 130

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYY------------VAPEVLK-RKSGPESDVW 151
               K +DFG+S  +  G        S YY             APE +   K   +SDVW
Sbjct: 131 RHQAKISDFGMSRALGAG--------SDYYRATTAGRWPLKWYAPECINYGKFSSKSDVW 182

Query: 152 SIGV 155
           S GV
Sbjct: 183 SYGV 186

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. Syk is important in B-cell receptor (BCR) signaling, while Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Syk also plays a central role in Fc receptor-mediated phagocytosis in the adaptive immune system. Shark is exclusively expressed in ectodermally derived epithelia, and is localized preferentially to the apical surface of the epithelial cells, it may play a role in a signaling pathway for epithelial cell polarity. Length = 257

>gnl|CDD|133232 cd05101, PTKc_FGFR2, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

 Score = 40.8 bits (95), Expect = 8e-04
 Identities = 44/146 (30%), Positives = 63/146 (43%), Gaps = 8/146 (5%)

Query: 37  LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 96
           LR+  R R   G E    I    D + T KD      Q+ R          +HRD+   N
Sbjct: 108 LREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARN 167

Query: 97  FLFKSAKEDSSLKATDFGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWS 152
            L     E++ +K  DFGL+   + I   KK  +      ++APE L  R    +SDVWS
Sbjct: 168 VL---VTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 224

Query: 153 IGVITY-ILLCGRRPFWDKTEDGIFK 177
            GV+ + I   G  P+     + +FK
Sbjct: 225 FGVLMWEIFTLGGSPYPGIPVEELFK 250

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. There are many splice variants of FGFR2 which show differential expression and binding to FGF ligands. Disruption of either FGFR2 or FGFR2b is lethal in mice, due to defects in the placenta or severe impairment of tissue development including lung, limb, and thyroid, respectively. Disruption of FGFR2c in mice results in defective bone and skull development. Genetic alterations of FGFR2 are associated with many human skeletal disorders including Apert syndrome, Crouzon syndrome, Jackson-Weiss syndrome, and Pfeiffer syndrome. Length = 304

>gnl|CDD|133195 cd05064, PTKc_EphR_A10, Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

 Score = 40.7 bits (95), Expect = 8e-04
 Identities = 26/98 (26%), Positives = 42/98 (42%), Gaps = 7/98 (7%)

Query: 86  GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS--AYYVAPEVLK-R 142
           G VH+ +     L  S   D   K + F      K    +  + G     + APE ++  
Sbjct: 127 GYVHKGLAAHKVLVNS---DLVCKISGFRRLQEDKSEAIYTTMSGKSPVLWAAPEAIQYH 183

Query: 143 KSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 179
                SDVWS G++ + ++  G RP+WD +   + K V
Sbjct: 184 HFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAV 221

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored to the plasma membrane. The resulting downstream signals occur bidirectionally in both EphR-expressing cells (forward signaling) and ephrin-expressing cells (reverse signaling). EphA10, which contains an inactive tyr kinase domain, may function to attenuate signals of co-clustered active receptors. EphA10 is mainly expressed in the testis. Ephrin/EphR interaction results in cell-cell repulsion or adhesion, making it important in neural development and plasticity, cell morphogenesis, cell-fate determination, embryonic development, tissue patterning, and angiogenesis. Length = 266

>gnl|CDD|173658 cd05114, PTKc_Tec_Rlk, Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

 Score = 40.6 bits (95), Expect = 9e-04
 Identities = 31/113 (27%), Positives = 50/113 (44%), Gaps = 17/113 (15%)

Query: 86  GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPE 138
             +HRD+   N L  S      +K +DFG++ ++         G KF        +  PE
Sbjct: 120 SFIHRDLAARNCLVSST---GVVKVSDFGMTRYVLDDEYTSSSGAKF-----PVKWSPPE 171

Query: 139 VLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK 189
           V    K   +SDVWS GV+ + +   G+ PF  K+   + + + R    +R K
Sbjct: 172 VFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRPK 224

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. Instead of PH, Rlk contains an N-terminal cysteine-rich region. In addition to PH, Tec also contains the Tec homology (TH) domain with proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells. Tec is more widely-expressed than other Tec subfamily kinases. It is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Rlk is expressed in T-cells and mast cell lines. Tec and Rlk are both key components of T-cell receptor (TCR) signaling. They are important in TCR-stimulated proliferation, IL-2 production and phopholipase C-gamma1 activation. Length = 256

>gnl|CDD|133247 cd05116, PTKc_Syk, Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

 Score = 40.3 bits (94), Expect = 9e-04
 Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 21/145 (14%)

Query: 40  LRRIRLCEG---------GEL--LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 88
           +R I +CE           EL  L++ L K +   TEK+   +V Q+            V
Sbjct: 59  VRMIGICEAESWMLVMELAELGPLNKFLQK-NKHVTEKNITELVHQVSMGMKYLEETNFV 117

Query: 89  HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY----VAPEVLK-RK 143
           HRD+   N L  +       K +DFGLS  +   + +        +     APE +   K
Sbjct: 118 HRDLAARNVLLVT---QHYAKISDFGLSKALGADENYYKAKTHGKWPVKWYAPECMNYYK 174

Query: 144 SGPESDVWSIGVITYILLC-GRRPF 167
              +SDVWS GV+ +     G++P+
Sbjct: 175 FSSKSDVWSFGVLMWEAFSYGQKPY 199

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, migration, and phagocytosis. More recently, Syk expression has been detected in other cell types (including epithelial cells, vascular endothelial cells, neurons, hepatocytes, and melanocytes), suggesting a variety of biological functions in non-immune cells. Syk plays a critical role in maintaining vascular integrity and in wound healing during embryogenesis. It also regulates Vav3, which is important in osteoclast function including bone development. In breast epithelial cells, where Syk acts as a negative regulator for epidermal growth factor receptor (EGFR) signaling, loss of Syk expression is associated with abnormal proliferation during cancer development suggesting a potential role as a tumor suppressor. In mice, Syk has been shown to inhibit malignant transformation of mammary epithelial cells induced with murine mammary tumor virus (MMTV). Length = 257

>gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair

 Score = 36.6 bits (85), Expect = 0.001
 Identities = 13/51 (25%), Positives = 23/51 (45%)

Query: 247 FVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQAL 297
           ++    L++          D+E    +   F+ ID D +G IS EE  +A+
Sbjct: 10  YIDVEELRKLLKALGLKLTDEEVEELIEADFNEIDKDGDGRISFEEFLEAM 60

Length = 60

>gnl|CDD|205383 pfam13202, EF_hand_3, EF hand

 Score = 35.7 bits (84), Expect = 0.001
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 273 LRDQFDAIDVDKNGSISLEEMRQAL 297
           L+D F   D + +G IS EE+++ L
Sbjct: 1   LKDLFRQFDTNGDGKISKEELKRLL 25

Length = 25

>gnl|CDD|133216 cd05085, PTKc_Fer, Catalytic domain of the Protein Tyrosine Kinase, Fer

 Score = 40.4 bits (94), Expect = 0.001
 Identities = 38/124 (30%), Positives = 57/124 (45%), Gaps = 17/124 (13%)

Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA---AECHLHGLVHRDMKPENFLF 99
           + L  GG+ L  +  KKD   T++    +V+  L  A   A       +HRD+   N L 
Sbjct: 71  MELVPGGDFLSFLRKKKDELKTKQ----LVKFALDAAAGMAYLESKNCIHRDLAARNCL- 125

Query: 100 KSAKEDSSLKATDFGLS----DFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIG 154
               E++ LK +DFG+S    D I      + I     + APE L   +   ESDVWS G
Sbjct: 126 --VGENNVLKISDFGMSRQEDDGIYSSSGLKQI--PIKWTAPEALNYGRYSSESDVWSYG 181

Query: 155 VITY 158
           ++ +
Sbjct: 182 ILLW 185

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-cell interactions mediated by adherens junctions and focal adhesions. Fer kinase also regulates cell cycle progression in malignant cells. Length = 250

>gnl|CDD|173667 cd05576, STKc_RPK118_like, Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

 Score = 40.2 bits (94), Expect = 0.001
 Identities = 48/184 (26%), Positives = 74/184 (40%), Gaps = 21/184 (11%)

Query: 47  EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 106
           EGG+L   I   K     E+       +M+      H  G+V RD+ P N L        
Sbjct: 68  EGGKLWSHIS--KFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDR---G 122

Query: 107 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRR 165
            ++ T F     ++     + +     Y APEV       E+ D WS+G I + LL G +
Sbjct: 123 HIQLTYFSRWSEVEDSCDGEAV--ENMYCAPEVGGISEETEACDWWSLGAILFELLTG-K 179

Query: 166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA-----L 220
              +    GI      N P++       +S  A+  +++LL  +P  RL A  A      
Sbjct: 180 TLVECHPSGINTHTTLNIPEW-------VSEEARSLLQQLLQFNPTERLGAGVAGVEDIK 232

Query: 221 SHPW 224
           SHP+
Sbjct: 233 SHPF 236

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phosphate (SPP), a lipid messenger involved in many cellular events. RPK118 may be involved in transmitting SPP-mediated signaling. RPK118 also binds the antioxidant peroxiredoxin-3 (PRDX3). RPK118 may be involved in the transport of PRDX3 from the cytoplasm to its site of function in the mitochondria. Length = 237

>gnl|CDD|226699 COG4248, COG4248, Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

 Score = 41.1 bits (96), Expect = 0.001
 Identities = 23/104 (22%), Positives = 40/104 (38%), Gaps = 10/104 (9%)

Query: 71  VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 130
           V R +    A  H HG V  D+   +FL     +   + +  F ++     G      VG
Sbjct: 122 VARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQINA---NGTLHLCPVG 178

Query: 131 SAYYVAPEVLKRKS------GPESDVWSIGVITY-ILLCGRRPF 167
            + +  PE+    S          D + + V+ + +L  GR P+
Sbjct: 179 VSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPY 222

Length = 637

>gnl|CDD|133181 cd05050, PTKc_Musk, Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

 Score = 40.2 bits (94), Expect = 0.001
 Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 26/106 (24%)

Query: 88  VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPE--------- 138
           VHRD+   N L     E+  +K  DFGLS         ++I  + YY A E         
Sbjct: 152 VHRDLATRNCL---VGENMVVKIADFGLS---------RNIYSADYYKASENDAIPIRWM 199

Query: 139 ----VLKRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 179
               +   +   ESDVW+ GV+ + I   G +P++    + +   V
Sbjct: 200 PPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYV 245

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates Musk autophosphorylation and activation, leading to the clustering of acetylcholine receptors (AChRs). To date, there is no evidence to suggest that agrin binds directly to Musk. Mutations in AChR, Musk and other partners are responsible for diseases of the NMJ, such as the autoimmune syndrome myasthenia gravis. Length = 288

>gnl|CDD|200946 pfam00036, efhand, EF hand

 Score = 35.5 bits (83), Expect = 0.001
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 272 DLRDQFDAIDVDKNGSISLEEMRQALAK 299
           +L++ F   D D +G IS EE ++ L K
Sbjct: 1   ELKEAFKEFDKDGDGKISFEEFKELLKK 28

The EF-hands can be divided into two classes: signaling proteins and buffering/transport proteins. The first group is the largest and includes the most well-known members of the family such as calmodulin, troponin C and S100B. These proteins typically undergo a calcium-dependent conformational change which opens a target binding site. The latter group is represented by calbindin D9k and do not undergo calcium dependent conformational changes. Length = 29

>gnl|CDD|173650 cd05094, PTKc_TrkC, Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

 Score = 39.6 bits (92), Expect = 0.002
 Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 33/130 (25%)

Query: 60  DSRYTEKDAAVVVRQMLRVAAECHL-------HGLVHRDMKPENFLFKSAKEDSSLKATD 112
           D +  +    + + QML +A++             VHRD+   N L  +   +  +K  D
Sbjct: 110 DGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGA---NLLVKIGD 166

Query: 113 FGLSDFIKPGKKFQDIVGSAYY------------VAPE-VLKRKSGPESDVWSIGVITY- 158
           FG+S         +D+  + YY            + PE ++ RK   ESDVWS GVI + 
Sbjct: 167 FGMS---------RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWE 217

Query: 159 ILLCGRRPFW 168
           I   G++P++
Sbjct: 218 IFTYGKQPWF 227

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some non-neural tissues including the developing heart. NT3/TrkC signaling plays an important role in the innervation of the cardiac conducting system and the development of smooth muscle cells. Mice deficient with NT3 and TrkC have multiple heart defects. NT3/TrkC signaling is also critical for the development and maintenance of enteric neurons that are important for the control of gut peristalsis. Length = 291

>gnl|CDD|178763 PLN03224, PLN03224, probable serine/threonine protein kinase; Provisional

 Score = 40.1 bits (93), Expect = 0.002
 Identities = 27/72 (37%), Positives = 36/72 (50%), Gaps = 5/72 (6%)

Query: 71  VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 130
           V+RQ+L    + H  G+VHRD+KPEN L      D  +K  DFG +  +  G  F  + G
Sbjct: 314 VMRQVLTGLRKLHRIGIVHRDIKPENLLVTV---DGQVKIIDFGAAVDMCTGINFNPLYG 370

Query: 131 --SAYYVAPEVL 140
                Y  PE L
Sbjct: 371 MLDPRYSPPEEL 382

Length = 507

>gnl|CDD|133248 cd05148, PTKc_Srm_Brk, Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

 Score = 39.3 bits (92), Expect = 0.002
 Identities = 31/114 (27%), Positives = 49/114 (42%), Gaps = 20/114 (17%)

Query: 88  VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA------YYVAPEVL- 140
           +HRD+   N L     ED   K  DFGL+  IK     +D+  S+       + APE   
Sbjct: 126 IHRDLAARNIL---VGEDLVCKVADFGLARLIK-----EDVYLSSDKKIPYKWTAPEAAS 177

Query: 141 KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 193
                 +SDVWS G++ Y +   G+ P+       ++ ++        R P P+
Sbjct: 178 HGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAG----YRMPCPA 227

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Srm and Brk however, lack the N-terminal myristylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Brk has been found to be overexpressed in a majority of breast tumors. Length = 261

>gnl|CDD|197492 smart00054, EFh, EF-hand, calcium binding motif

 Score = 35.0 bits (82), Expect = 0.002
 Identities = 10/22 (45%), Positives = 12/22 (54%)

Query: 353 QAAFEKFDIDRDGFITPEELRM 374
           + AF  FD D DG I  EE + 
Sbjct: 3   KEAFRLFDKDGDGKIDFEEFKD 24

EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions. Length = 29

>gnl|CDD|222177 pfam13499, EF_hand_5, EF-hand domain pair

 Score = 35.4 bits (82), Expect = 0.003
 Identities = 18/58 (31%), Positives = 26/58 (44%), Gaps = 2/58 (3%)

Query: 315 QAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEEL 372
           + +D + DG +D  E     L    L+  D E      +A F + D D DG I+ EE 
Sbjct: 1   KLLDKDGDGYIDVEELRKL-LKALGLKLTDEEV-EELIEADFNEIDKDGDGRISFEEF 56

Length = 60

>gnl|CDD|133200 cd05069, PTKc_Yes, Catalytic domain of the Protein Tyrosine Kinase, Yes

 Score = 39.3 bits (91), Expect = 0.003
 Identities = 50/178 (28%), Positives = 75/178 (42%), Gaps = 24/178 (13%)

Query: 49  GELLDRILAKKDSRYTEKDAAV-VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           G LLD  L + D +Y +    V +  Q+    A       +HRD++  N L     ++  
Sbjct: 85  GSLLD-FLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANIL---VGDNLV 140

Query: 108 LKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVI-TY 158
            K  DFGL+  I       + G KF        + APE  L  +   +SDVWS G++ T 
Sbjct: 141 CKIADFGLARLIEDNEYTARQGAKF-----PIKWTAPEAALYGRFTIKSDVWSFGILLTE 195

Query: 159 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARLT 215
           ++  GR P+       + ++V R      R P P     S  + +K    KDP  R T
Sbjct: 196 LVTKGRVPYPGMVNREVLEQVERG----YRMPCPQGCPESLHELMKLCWKKDPDERPT 249

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Length = 260

>gnl|CDD|133168 cd05036, PTKc_ALK_LTK, Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

 Score = 39.0 bits (91), Expect = 0.003
 Identities = 31/118 (26%), Positives = 44/118 (37%), Gaps = 40/118 (33%)

Query: 78  VAAECHL---HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 134
           VA  C     +  +HRD+   N L          K  DFG++         +DI  ++YY
Sbjct: 125 VAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMA---------RDIYRASYY 175

Query: 135 VAPEVLKRKSG----------PE----------SDVWSIGVITY-ILLCGRRPFWDKT 171
                  RK G          PE          +DVWS GV+ + I   G  P+  +T
Sbjct: 176 -------RKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRT 226

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well as visceral muscle differentiation in Drosophila. ALK is aberrantly expressed as fusion proteins, due to chromosomal translocations, in about 60% of anaplastic large cell lymphomas (ALCLs). ALK fusion proteins are also found in rare cases of diffuse large B cell lymphomas (DLBCLs). LTK is mainly expressed in B lymphocytes and neuronal tissues. It is important in cell proliferation and survival. Transgenic mice expressing TLK display retarded growth and high mortality rate. In addition, a polymorphism in mouse and human LTK is implicated in the pathogenesis of systemic lupus erythematosus. Length = 277

>gnl|CDD|173646 cd05087, PTKc_Aatyk1_Aatyk3, Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

 Score = 39.1 bits (91), Expect = 0.003
 Identities = 45/187 (24%), Positives = 80/187 (42%), Gaps = 37/187 (19%)

Query: 14  CLDMVNLVTPMLPPTRPMEIVLPLRKLRR-IRLCEGGELLDRILAKKDSRYTEKDAAVVV 72
           CL     VTP L     ME   PL  L+  +R C   EL+       D    ++ A  + 
Sbjct: 60  CLGQCTEVTPYL---LVMEFC-PLGDLKGYLRSCRKAELM-----TPDPTTLQRMACEIA 110

Query: 73  RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD-------FIKPGKKF 125
             +L +    H +  +H D+   N L  +   D ++K  D+GLS        ++ P + +
Sbjct: 111 LGLLHL----HKNNFIHSDLALRNCLLTA---DLTVKIGDYGLSHNKYKEDYYVTPDQLW 163

Query: 126 QDIVGSAYYVAPEVLKRKSG--------PESDVWSIGVITYILL-CGRRPFWDKTEDGIF 176
             +     ++APE++    G         ES+VWS+GV  + L   G +P+   +++ + 
Sbjct: 164 VPL----RWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVL 219

Query: 177 KEVLRNK 183
              +R +
Sbjct: 220 TYTVREQ 226

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells. Aatyk1 has been implicated in neural differentiation, and is a regulator of the Na-K-2Cl cotransporter, a membrane protein involved in cell proliferation and survival, epithelial transport, and blood pressure control. The function of Aatyk3 is still unknown. Length = 269

>gnl|CDD|133230 cd05099, PTKc_FGFR4, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

 Score = 39.2 bits (91), Expect = 0.003
 Identities = 39/136 (28%), Positives = 58/136 (42%), Gaps = 8/136 (5%)

Query: 37  LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 96
           LR+  R R   G +    I    + + + KD      Q+ R          +HRD+   N
Sbjct: 105 LREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARN 164

Query: 97  FLFKSAKEDSSLKATDFGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWS 152
            L     ED+ +K  DFGL+     I   KK  +      ++APE L  R    +SDVWS
Sbjct: 165 VL---VTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWS 221

Query: 153 IGVITY-ILLCGRRPF 167
            G++ + I   G  P+
Sbjct: 222 FGILMWEIFTLGGSPY 237

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Unlike other FGFRs, there is only one splice form of FGFR4. It binds FGF1, FGF2, FGF6, FGF19, and FGF23. FGF19 is a selective ligand for FGFR4. Although disruption of FGFR4 in mice causes no obvious phenotype, in vivo inhibition of FGFR4 in cultured skeletal muscle cells resulted in an arrest of muscle progenitor differentiation. FGF6 and FGFR4 are uniquely expressed in myofibers and satellite cells. FGF6/FGFR4 signaling appears to play a key role in the regulation of muscle regeneration. A polymorphism in FGFR4 is found in head and neck squamous cell carcinoma. Length = 314

>gnl|CDD|238009 cd00052, EH, Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction

 Score = 35.7 bits (83), Expect = 0.003
 Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 3/59 (5%)

Query: 275 DQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAA 333
             F ++D D +G IS +E R  L K     L  S + +I    D + DG +D  EF  A
Sbjct: 3   QIFRSLDPDGDGLISGDEARPFLGK---SGLPRSVLAQIWDLADTDKDGKLDKEEFAIA 58

The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs. Length = 67

>gnl|CDD|133172 cd05040, PTKc_Ack_like, Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

 Score = 38.5 bits (90), Expect = 0.003
 Identities = 31/127 (24%), Positives = 46/127 (36%), Gaps = 30/127 (23%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA---AECHLHGLVHRDMKPENFLFKS 101
           L   G LLDR+   +         + +    +++A           +HRD+   N L  S
Sbjct: 76  LAPLGSLLDRL---RKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLAS 132

Query: 102 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPES 148
             +   +K  DFGL   +   +         +YV            APE L+ R     S
Sbjct: 133 DDK---VKIGDFGLMRALPQNED--------HYVMEEHLKVPFAWCAPESLRTRTFSHAS 181

Query: 149 DVWSIGV 155
           DVW  GV
Sbjct: 182 DVWMFGV 188

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with androgen-independent prostate cancer progression. Tnk1 regulates TNFalpha signaling and may play an important role in cell death. Length = 257

>gnl|CDD|133186 cd05055, PTKc_PDGFR, Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

 Score = 38.6 bits (90), Expect = 0.004
 Identities = 48/185 (25%), Positives = 77/185 (41%), Gaps = 24/185 (12%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
           C  G+LL+ +  K++S  T +D      Q+ +  A       +HRD+   N L    K  
Sbjct: 121 CCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGK-- 178

Query: 106 SSLKATDFGLSDFIKPGKKFQDIV-GSAY----YVAPE-VLKRKSGPESDVWSIGVITY- 158
             +K  DFGL+  I     +  +V G+A     ++APE +       ESDVWS G++ + 
Sbjct: 179 -IVKICDFGLARDIMNDSNY--VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWE 235

Query: 159 ILLCGRRPFWDKTEDGIFKEVLRN-----KPDFRRKPWPSISNSAKDFVKKLLVKDPRAR 213
           I   G  P+     D  F ++++      +P+        I  +  D        DP  R
Sbjct: 236 IFSLGSNPYPGMPVDSKFYKLIKEGYRMAQPEHAPAEIYDIMKTCWDA-------DPLKR 288

Query: 214 LTAAQ 218
            T  Q
Sbjct: 289 PTFKQ 293

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR subfamily receptors are important in the development of a variety of cells. PDGFRs are expressed in a many cells including fibroblasts, neurons, endometrial cells, mammary epithelial cells, and vascular smooth muscle cells. PDGFR signaling is critical in normal embryonic development, angiogenesis, and wound healing. PDGFRs transduce mitogenic signals for connective tissue cells and are important for cell shape and motility. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem cells, the interstitial cells of Cajal, and the pacemaker cells of the GI tract. CSF-1R signaling is critical in the regulation of macrophages and osteoclasts. Mammalian FLT3 plays an important role in the survival, proliferation, and differentiation of stem cells. Length = 302

>gnl|CDD|131818 TIGR02771, TraF_Ti, conjugative transfer signal peptidase TraF

 Score = 37.8 bits (88), Expect = 0.004
 Identities = 23/99 (23%), Positives = 31/99 (31%), Gaps = 9/99 (9%)

Query: 26  PPTRPMEIVLPLRKLRRIRLCEGG--ELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH 83
           PP  P       R   R  LC GG   LL R+L     R T +   V +   L   ++  
Sbjct: 57  PPDNPQFEEARERGYLREGLCPGGFGPLLKRVLGLPGDRVTVRADVVAINGQLLPYSKPL 116

Query: 84  LHGLVHRDMKP-------ENFLFKSAKEDSSLKATDFGL 115
                 R + P         F        +S  +  FG 
Sbjct: 117 ATDSSGRPLPPFPEGVIPPGFFVVHDTSPTSFDSRYFGP 155

This protein is found in apparent operons encoding elements of conjugative transfer systems. This family is homologous to a broader family of signal (leader) peptidases such as lepB. This family is present in both Ti-type and I-type conjugative systems. Length = 171

>gnl|CDD|165473 PHA03207, PHA03207, serine/threonine kinase US3; Provisional

 Score = 38.7 bits (90), Expect = 0.004
 Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 9/110 (8%)

Query: 66  KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG----LSDFIKP 121
           + A  + R++L   A  H  G++HRD+K EN +F    E++ L   DFG    L      
Sbjct: 185 EQAITIQRRLLEALAYLHGRGIIHRDVKTEN-IFLDEPENAVLG--DFGAACKLDAHPDT 241

Query: 122 GKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDK 170
            + +    G+    +PE+L       ++D+WS G++ + +       + K
Sbjct: 242 PQCY-GWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGK 290

Length = 392

>gnl|CDD|133229 cd05098, PTKc_FGFR1, Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

 Score = 38.5 bits (89), Expect = 0.004
 Identities = 42/146 (28%), Positives = 61/146 (41%), Gaps = 8/146 (5%)

Query: 37  LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 96
           LR+  R R   G E         + + + KD      Q+ R          +HRD+   N
Sbjct: 111 LREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARN 170

Query: 97  FLFKSAKEDSSLKATDFGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWS 152
            L     ED+ +K  DFGL+     I   KK  +      ++APE L  R    +SDVWS
Sbjct: 171 VL---VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 227

Query: 153 IGVITY-ILLCGRRPFWDKTEDGIFK 177
            GV+ + I   G  P+     + +FK
Sbjct: 228 FGVLLWEIFTLGGSPYPGVPVEELFK 253

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to more that one type of receptor. Alternative splicing of FGFR1 transcripts produces a variety of isoforms, which are differentially expressed in cells. FGFR1 binds the ligands, FGF1 and FGF2, with high affinity and has also been reported to bind FGF4, FGF6, and FGF9. FGFR1 signaling is critical in the control of cell migration during embryo development. It promotes cell proliferation in fibroblasts. Nuclear FGFR1 plays a role in the regulation of transcription. Mutations, insertions or deletions of FGFR1 have been identified in patients with Kallman's syndrome (KS), an inherited disorder characterized by hypogonadotropic hypogonadism and loss of olfaction. Aberrant FGFR1 expression has been found in some human cancers including 8P11 myeloproliferative syndrome (EMS), breast cancer, and pancreatic adenocarcinoma. Length = 307

>gnl|CDD|165476 PHA03210, PHA03210, serine/threonine kinase US3; Provisional

 Score = 38.9 bits (90), Expect = 0.004
 Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 6/89 (6%)

Query: 71  VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG-LSDFIKPGKKFQ-DI 128
           +++Q+L      H   L+HRD+K EN        D  +   DFG    F K  + F    
Sbjct: 272 IMKQLLCAVEYIHDKKLIHRDIKLENIFLNC---DGKIVLGDFGTAMPFEKEREAFDYGW 328

Query: 129 VGSAYYVAPEVLKRKSGPE-SDVWSIGVI 156
           VG+    +PE+L      E +D+WS G+I
Sbjct: 329 VGTVATNSPEILAGDGYCEITDIWSCGLI 357

Length = 501

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	429
KOG0033	355	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0615	475	consensus Serine/threonine protein kinase Chk2 and	100.0
KOG0575	592	consensus Polo-like serine/threonine protein kinas	100.0
KOG0599	411	consensus Phosphorylase kinase gamma subunit [Carb	100.0
KOG0032	382	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0581	364	consensus Mitogen-activated protein kinase kinase	100.0
KOG0592	604	consensus 3-phosphoinositide-dependent protein kin	100.0
KOG0588	786	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0583	370	consensus Serine/threonine protein kinase [Signal	100.0
KOG0604	400	consensus MAP kinase-activated protein kinase 2 [S	100.0
KOG0598	357	consensus Ribosomal protein S6 kinase and related	100.0
KOG0595	429	consensus Serine/threonine-protein kinase involved	100.0
KOG0616	355	consensus cAMP-dependent protein kinase catalytic	100.0
KOG0198	313	consensus MEKK and related serine/threonine protei	100.0
KOG0578	550	consensus p21-activated serine/threonine protein k	100.0
KOG0591	375	consensus NIMA (never in mitosis)-related G2-speci	100.0
KOG0593	396	consensus Predicted protein kinase KKIAMRE [Genera	100.0
KOG0661	538	consensus MAPK related serine/threonine protein ki	100.0
KOG0605	550	consensus NDR and related serine/threonine kinases	100.0
KOG0610	459	consensus Putative serine/threonine protein kinase	100.0
KOG0582	516	consensus Ste20-like serine/threonine protein kina	100.0
KOG4717	864	consensus Serine/threonine protein kinase [Signal	100.0
KOG0611	668	consensus Predicted serine/threonine protein kinas	100.0
KOG0585	576	consensus Ca2+/calmodulin-dependent protein kinase	100.0
KOG0663	419	consensus Protein kinase PITSLRE and related kinas	100.0
KOG0660	359	consensus Mitogen-activated protein kinase [Signal	100.0
KOG0600	560	consensus Cdc2-related protein kinase [Cell cycle	100.0
KOG0658	364	consensus Glycogen synthase kinase-3 [Carbohydrate	100.0
KOG0597	808	consensus Serine-threonine protein kinase FUSED [G	100.0
KOG0659	318	consensus Cdk activating kinase (CAK)/RNA polymera	100.0
KOG0192	362	consensus Tyrosine kinase specific for activated (	100.0
KOG0694	694	consensus Serine/threonine protein kinase [Signal	100.0
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	100.0
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	100.0
PTZ00263	329	protein kinase A catalytic subunit; Provisional	100.0
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	100.0
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	100.0
KOG0594	323	consensus Protein kinase PCTAIRE and related kinas	100.0
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	100.0
KOG0589	426	consensus Serine/threonine protein kinase [General	100.0
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	100.0
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	100.0
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	100.0
PTZ00036	440	glycogen synthase kinase; Provisional	100.0
KOG0580	281	consensus Serine/threonine protein kinase [Cell cy	100.0
KOG0607	463	consensus MAP kinase-interacting kinase and relate	100.0
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	100.0
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	100.0
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	100.0
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	100.0
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	100.0
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	100.0
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	100.0
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	100.0
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	100.0
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	100.0
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	100.0
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	100.0
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	100.0
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	100.0
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	100.0
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	100.0
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	100.0
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	100.0
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	100.0
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	100.0
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	100.0
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	100.0
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	100.0
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	100.0
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	100.0
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	100.0
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	100.0
KOG0201	467	consensus Serine/threonine protein kinase [Signal	100.0
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	100.0
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	100.0
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	100.0
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	100.0
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	100.0
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	100.0
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	100.0
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	100.0
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	100.0
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	100.0
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	100.0
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	100.0
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	100.0
PTZ00267	478	NIMA-related protein kinase; Provisional	100.0
KOG0197	468	consensus Tyrosine kinases [Signal transduction me	100.0
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	100.0
KOG0612	1317	consensus Rho-associated, coiled-coil containing p	100.0
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	100.0
PTZ00283	496	serine/threonine protein kinase; Provisional	100.0
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	100.0
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	100.0
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	100.0
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	100.0
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	100.0
KOG0579	1187	consensus Ste20-like serine/threonine protein kina	100.0
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	100.0
KOG4279	1226	consensus Serine/threonine protein kinase [Signal	100.0
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	100.0
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	100.0
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	100.0
KOG0667	586	consensus Dual-specificity tyrosine-phosphorylatio	100.0
PLN00034	353	mitogen-activated protein kinase kinase; Provision	100.0
PHA02988	283	hypothetical protein; Provisional	100.0
KOG4721	904	consensus Serine/threonine protein kinase, contain	100.0
PHA03212	391	serine/threonine kinase US3; Provisional	100.0
KOG0586	596	consensus Serine/threonine protein kinase [General	100.0
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	100.0
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	100.0
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	100.0
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	100.0
PTZ00284	467	protein kinase; Provisional	100.0
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	100.0
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	100.0
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	100.0
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	100.0
KOG0584	632	consensus Serine/threonine protein kinase [General	100.0
KOG0986	591	consensus G protein-coupled receptor kinase [Signa	100.0
KOG0596	677	consensus Dual specificity; serine/threonine and t	100.0
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	100.0
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	100.0
KOG0690	516	consensus Serine/threonine protein kinase [Signal	100.0
KOG0983	391	consensus Mitogen-activated protein kinase (MAPK)	100.0
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	100.0
KOG4236	888	consensus Serine/threonine protein kinase PKC mu/P	100.0
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	100.0
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	100.0
KOG0577	948	consensus Serine/threonine protein kinase [Signal	100.0
PHA03209	357	serine/threonine kinase US3; Provisional	100.0
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	100.0
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	100.0
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	100.0
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	100.0
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	100.0
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	100.0
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	100.0
KOG4645	1509	consensus MAPKKK (MAP kinase kinase kinase) SSK2 a	100.0
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	100.0
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	100.0
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	100.0
KOG1989	738	consensus ARK protein kinase family [Signal transd	100.0
PTZ00266	1021	NIMA-related protein kinase; Provisional	100.0
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	100.0
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	100.0
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	100.0
KOG0669	376	consensus Cyclin T-dependent kinase CDK9 [Cell cyc	100.0
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	100.0
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	100.0
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	100.0
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.98
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.98
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.98
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.98
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.98
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.98
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.98
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.98
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.98
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.98
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.98
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.98
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.98
KOG0696	683	consensus Serine/threonine protein kinase [Signal	99.98
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.98
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.98
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.98
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.98
PHA03211	461	serine/threonine kinase US3; Provisional	99.98
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.98
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.97
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.97
PHA03207	392	serine/threonine kinase US3; Provisional	99.97
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.97
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.97
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.97
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.97
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.97
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.97
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.97
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.97
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.97
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.97
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.97
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.97
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.97
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.97
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.97
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.97
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.97
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.97
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.97
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.97
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.97
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.97
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.97
KOG0574	502	consensus STE20-like serine/threonine kinase MST [	99.97
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.97
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.97
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.97
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.97
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.97
PLN00009	294	cyclin-dependent kinase A; Provisional	99.97
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.97
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.97
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.97
KOG2345	302	consensus Serine/threonine protein kinase/TGF-beta	99.97
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.97
KOG0614	732	consensus cGMP-dependent protein kinase [Signal tr	99.97
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.97
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.97
KOG0666	438	consensus Cyclin C-dependent kinase CDK8 [Transcri	99.97
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.97
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.97
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.97
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.97
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.97
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.97
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.97
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.97
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.97
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.97
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.97
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.97
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.97
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.97
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.97
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.97
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.97
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.97
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.97
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.97
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.97
KOG0665	369	consensus Jun-N-terminal kinase (JNK) [Signal tran	99.97
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.97
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.97
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.97
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.97
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.97
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.97
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.97
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.97
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.97
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.97
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.97
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.97
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.97
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.97
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.97
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.97
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.97
KOG1026	774	consensus Nerve growth factor receptor TRKA and re	99.97
KOG0671	415	consensus LAMMER dual specificity kinases [Signal	99.97
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.97
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.97
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.97
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.97
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.97
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.97
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.97
KOG0194	474	consensus Protein tyrosine kinase [Signal transduc	99.97
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.97
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.97
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.97
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.97
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.97
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.97
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.97
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.97
KOG0662	292	consensus Cyclin-dependent kinase CDK5 [Intracellu	99.97
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.97
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.97
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.97
PHA03210	501	serine/threonine kinase US3; Provisional	99.97
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.97
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.97
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.97
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.97
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.97
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.97
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.97
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.97
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.97
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.97
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.97
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.97
KOG0608	1034	consensus Warts/lats-like serine threonine kinases	99.97
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.97
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.97
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.97
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.97
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.97
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.97
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.97
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.97
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.97
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.97
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.97
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.97
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.97
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.97
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.97
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.97
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.97
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.97
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.97
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.97
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.97
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.97
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.97
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.97
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.97
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.97
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.97
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.97
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.97
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.97
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.97
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.97
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.97
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.97
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.97
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.97
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.97
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.97
KOG0193	678	consensus Serine/threonine protein kinase RAF [Sig	99.97
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.96
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.96
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.96
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.96
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.96
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.96
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.96
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.96
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.96
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.96
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.96
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.96
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.96
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.96
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.96
KOG0587	953	consensus Traf2- and Nck-interacting kinase and re	99.96
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.96
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.96
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.96
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.96
KOG1095	1025	consensus Protein tyrosine kinase [Signal transduc	99.96
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.96
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.96
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.96
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.96
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.96
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.96
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.96
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.96
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.96
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.96
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.96
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.96
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.96
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.96
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.96
KOG1151	775	consensus Tousled-like protein kinase [Signal tran	99.96
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.96
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.96
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.96
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.96
PHA02882	294	putative serine/threonine kinase; Provisional	99.96
PLN00181	793	protein SPA1-RELATED; Provisional	99.96
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.96
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.96
KOG0695	593	consensus Serine/threonine protein kinase [Signal	99.96
KOG4250	732	consensus TANK binding protein kinase TBK1 [Signal	99.96
KOG4257	974	consensus Focal adhesion tyrosine kinase FAK, cont	99.95
KOG4278	1157	consensus Protein tyrosine kinase [Signal transduc	99.95
KOG0668	338	consensus Casein kinase II, alpha subunit [Signal	99.95
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.95
KOG1187	361	consensus Serine/threonine protein kinase [Signal	99.95
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.95
KOG0670	752	consensus U4/U6-associated splicing factor PRP4 [R	99.95
KOG1035	1351	consensus eIF-2alpha kinase GCN2 [Translation, rib	99.95
KOG1006	361	consensus Mitogen-activated protein kinase (MAPK)	99.95
KOG1027	903	consensus Serine/threonine protein kinase and endo	99.95
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.95
KOG0199	1039	consensus ACK and related non-receptor tyrosine ki	99.95
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.94
KOG0664	449	consensus Nemo-like MAPK-related serine/threonine	99.94
KOG0196	996	consensus Tyrosine kinase, EPH (ephrin) receptor f	99.94
KOG1094	807	consensus Discoidin domain receptor DDR1 [Signal t	99.94
KOG0200	609	consensus Fibroblast/platelet-derived growth facto	99.93
KOG1290	590	consensus Serine/threonine protein kinase [Signal	99.92
KOG0984	282	consensus Mitogen-activated protein kinase (MAPK)	99.92
COG5126	160	FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S	99.91
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.91
KOG0576	829	consensus Mitogen-activated protein kinase kinase	99.91
KOG1167	418	consensus Serine/threonine protein kinase of the C	99.91
KOG1025	1177	consensus Epidermal growth factor receptor EGFR an	99.91
KOG1024	563	consensus Receptor-like protein tyrosine kinase RY	99.91
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.9
KOG0027	151	consensus Calmodulin and related proteins (EF-Hand	99.9
KOG3653	534	consensus Transforming growth factor beta/activin	99.9
KOG2052	513	consensus Activin A type IB receptor, serine/threo	99.9
KOG1345	378	consensus Serine/threonine kinase [Signal transduc	99.89
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.88
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.84
KOG1152	772	consensus Signal transduction serine/threonine kin	99.83
KOG0028	172	consensus Ca2+-binding protein (centrin/caltractin	99.83
KOG4158	598	consensus BRPK/PTEN-induced protein kinase [Signal	99.8
KOG0603	612	consensus Ribosomal protein S6 kinase [Signal tran	99.78
PTZ00183	158	centrin; Provisional	99.78
KOG1164	322	consensus Casein kinase (serine/threonine/tyrosine	99.77
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.77
PTZ00184	149	calmodulin; Provisional	99.77
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.77
KOG1033	516	consensus eIF-2alpha kinase PEK/EIF2AK3 [Translati	99.73
KOG1023	484	consensus Natriuretic peptide receptor, guanylate	99.73
KOG0030	152	consensus Myosin essential light chain, EF-Hand pr	99.72
KOG1163	341	consensus Casein kinase (serine/threonine/tyrosine	99.72
KOG0031	171	consensus Myosin regulatory light chain, EF-Hand p	99.72
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	99.71
KOG0034	187	consensus Ca2+/calmodulin-dependent protein phosph	99.71
KOG0044	193	consensus Ca2+ sensor (EF-Hand superfamily) [Signa	99.7
KOG0195	448	consensus Integrin-linked kinase [Signal transduct	99.7
KOG1240	1431	consensus Protein kinase containing WD40 repeats [	99.69
KOG0037	221	consensus Ca2+-binding protein, EF-Hand protein su	99.64
KOG1165	449	consensus Casein kinase (serine/threonine/tyrosine	99.63
PRK12274	218	serine/threonine protein kinase; Provisional	99.6
PRK09188	365	serine/threonine protein kinase; Provisional	99.58
KOG0590	601	consensus Checkpoint kinase and related serine/thr	99.57
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	99.53
KOG1166	974	consensus Mitotic checkpoint serine/threonine prot	99.51
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.5
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	99.48
KOG0036	463	consensus Predicted mitochondrial carrier protein	99.44
KOG4223	325	consensus Reticulocalbin, calumenin, DNA supercoil	99.43
KOG4223	325	consensus Reticulocalbin, calumenin, DNA supercoil	99.39
KOG0606	1205	consensus Microtubule-associated serine/threonine	99.37
KOG0038	189	consensus Ca2+-binding kinase interacting protein	99.36
KOG1266	458	consensus Protein kinase [Signal transduction mech	99.3
PRK10345	210	hypothetical protein; Provisional	99.28
smart00090	237	RIO RIO-like kinase.	99.28
PLN02964	644	phosphatidylserine decarboxylase	99.23
PRK14879	211	serine/threonine protein kinase; Provisional	99.18
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	99.16
PF13499	66	EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A	99.16
cd05022	89	S-100A13 S-100A13: S-100A13 domain found in protei	99.15
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	99.15
KOG0044	193	consensus Ca2+ sensor (EF-Hand superfamily) [Signa	99.15
cd05022	89	S-100A13 S-100A13: S-100A13 domain found in protei	99.15
PRK09605	535	bifunctional UGMP family protein/serine/threonine	99.13
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	99.11
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	99.1
KOG0377	631	consensus Protein serine/threonine phosphatase RDG	99.07
PF13499	66	EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A	99.05
COG5126	160	FRQ1 Ca2+-binding protein (EF-Hand superfamily) [S	99.05
KOG2137	700	consensus Protein kinase [Signal transduction mech	99.04
KOG0037	221	consensus Ca2+-binding protein, EF-Hand protein su	99.04
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	99.02
cd05027	88	S-100B S-100B: S-100B domain found in proteins sim	99.01
cd05027	88	S-100B S-100B: S-100B domain found in proteins sim	99.0
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	98.96
cd05029	88	S-100A6 S-100A6: S-100A6 domain found in proteins	98.95
PTZ00183	158	centrin; Provisional	98.95
KOG0027	151	consensus Calmodulin and related proteins (EF-Hand	98.94
smart00027	96	EH Eps15 homology domain. Pair of EF hand motifs t	98.94
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	98.93
KOG3087	229	consensus Serine/threonine protein kinase [General	98.92
cd05026	93	S-100Z S-100Z: S-100Z domain found in proteins sim	98.91
cd05026	93	S-100Z S-100Z: S-100Z domain found in proteins sim	98.88
cd00213	88	S-100 S-100: S-100 domain, which represents the la	98.87
cd05023	89	S-100A11 S-100A11: S-100A11 domain found in protei	98.82
cd05031	94	S-100A10_like S-100A10_like: S-100A10 domain found	98.82
cd05025	92	S-100A1 S-100A1: S-100A1 domain found in proteins	98.81
cd05031	94	S-100A10_like S-100A10_like: S-100A10 domain found	98.81
cd05029	88	S-100A6 S-100A6: S-100A6 domain found in proteins	98.8
PTZ00184	149	calmodulin; Provisional	98.8
cd05025	92	S-100A1 S-100A1: S-100A1 domain found in proteins	98.79
cd00052	67	EH Eps15 homology domain; found in proteins implic	98.77
COG4248	637	Uncharacterized protein with protein kinase and he	98.75
cd05023	89	S-100A11 S-100A11: S-100A11 domain found in protei	98.75
PF13833	54	EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A	98.75
KOG0028	172	consensus Ca2+-binding protein (centrin/caltractin	98.74
KOG2643	489	consensus Ca2+ binding protein, contains EF-hand m	98.74
cd00252	116	SPARC_EC SPARC_EC; extracellular Ca2+ binding doma	98.74
cd00052	67	EH Eps15 homology domain; found in proteins implic	98.74
KOG1243	690	consensus Protein kinase [General function predict	98.73
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	98.71
cd00213	88	S-100 S-100: S-100 domain, which represents the la	98.7
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	98.7
smart00027	96	EH Eps15 homology domain. Pair of EF hand motifs t	98.7
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.65
KOG0034	187	consensus Ca2+/calmodulin-dependent protein phosph	98.65
PF14658	66	EF-hand_9: EF-hand domain	98.61
PLN02964	644	phosphatidylserine decarboxylase	98.6
KOG0601	524	consensus Cyclin-dependent kinase WEE1 [Cell cycle	98.57
KOG4251	362	consensus Calcium binding protein [General functio	98.55
KOG0040	2399	consensus Ca2+-binding actin-bundling protein (spe	98.55
cd05030	88	calgranulins Calgranulins: S-100 domain found in p	98.55

>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=5.8e-47  Score=324.43  Aligned_cols=249  Identities=31%  Similarity=0.595  Sum_probs=216.6

Q ss_pred             ccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 014171            8 DTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGL   87 (429)
Q Consensus         8 ~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i   87 (429)
                      +++..+.++|++|+.....-.      .....|+|+|++.||+|..-+..+  ..++|..+-.+++||++||.|||.+||
T Consensus        60 EarIC~~LqHP~IvrL~~ti~------~~~~~ylvFe~m~G~dl~~eIV~R--~~ySEa~aSH~~rQiLeal~yCH~n~I  131 (355)
T KOG0033|consen   60 EARICRKLQHPNIVRLHDSIQ------EESFHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILEALAYCHSNGI  131 (355)
T ss_pred             HHHHHHhcCCCcEeehhhhhc------ccceeEEEEecccchHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHhcCc
Confidence            334444555555555432222      223346899999999999888666  578999999999999999999999999


Q ss_pred             eecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCC
Q 014171           88 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRP  166 (429)
Q Consensus        88 ~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~p  166 (429)
                      ||||+||.|+++.+..++.-+||+|||+|..+..+......+|||.|+|||++.+ +++..+||||+||+||-++.|.+|
T Consensus       132 vHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~P  211 (355)
T KOG0033|consen  132 VHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP  211 (355)
T ss_pred             eeccCChhheeeeeccCCCceeecccceEEEeCCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCC
Confidence            9999999999999888888999999999999987777788899999999999975 679999999999999999999999


Q ss_pred             CCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCCCCCCcChHHHHhhHH
Q 014171          167 FWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQ  246 (429)
Q Consensus       167 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~~~~~~~~~~l~~~~~  246 (429)
                      |++.+...+++.|+.+.+.++.+.|+.+++++++|+++||..||.+|+|+.|+|+|||+++...-.........+..|+.
T Consensus       212 F~~~~~~rlye~I~~g~yd~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~HpWi~~r~~~As~~H~~dtvd~lrk  291 (355)
T KOG0033|consen  212 FWDEDQHRLYEQIKAGAYDYPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALKHPWICNRERVASAIHRQDTVDCLKK  291 (355)
T ss_pred             CCCccHHHHHHHHhccccCCCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhCCchhcchHHHHHHhhhHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999987665555556678999999


Q ss_pred             hhhhhHHHHHHHHhhhcc
Q 014171          247 FVKYSRLKQFALRALAST  264 (429)
Q Consensus       247 ~~~~~~~~~~~l~~~~~~  264 (429)
                      |..+.+++-.++..+...
T Consensus       292 fNarRKLKgavLtav~s~  309 (355)
T KOG0033|consen  292 FNARRKLKGAILTTVIAT  309 (355)
T ss_pred             hhHHHHHHHHHHHHHHhc
Confidence            999999999888776643

>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=7e-48  Score=352.52  Aligned_cols=211  Identities=32%  Similarity=0.603  Sum_probs=186.6

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH   85 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~   85 (429)
                      ++.+.|||++++.+++..            +...||||||++||+|.+++..+  +.+.+...+.+++|++.||.|||++
T Consensus       230 LkkL~HP~IV~~~d~f~~------------~ds~YmVlE~v~GGeLfd~vv~n--k~l~ed~~K~~f~Qll~avkYLH~~  295 (475)
T KOG0615|consen  230 LKKLSHPNIVRIKDFFEV------------PDSSYMVLEYVEGGELFDKVVAN--KYLREDLGKLLFKQLLTAVKYLHSQ  295 (475)
T ss_pred             HHhcCCCCEEEEeeeeec------------CCceEEEEEEecCccHHHHHHhc--cccccchhHHHHHHHHHHHHHHHHc
Confidence            345666666666665543            22337899999999999999776  6899999999999999999999999


Q ss_pred             CCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccCC----CCCCcchHHHHHHHHHHh
Q 014171           86 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK----SGPESDVWSIGVITYILL  161 (429)
Q Consensus        86 ~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~~----~~~~~DiwslG~il~~l~  161 (429)
                      ||+||||||+|||+....+...+||+|||+|+.........+.||||.|.|||++.+.    +..++|+||+||+||-++
T Consensus       296 GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcL  375 (475)
T KOG0615|consen  296 GIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCL  375 (475)
T ss_pred             CcccccCCcceEEeccCCcceEEEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEe
Confidence            9999999999999997666788999999999999888888999999999999999743    245899999999999999


Q ss_pred             hCCCCCCCCChhH-HHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          162 CGRRPFWDKTEDG-IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       162 ~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                      +|.+||.+..... ..+.|..+.+.+.++.|..+++++.+||.+||..||++|||++|+|+||||+....
T Consensus       376 sG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~hpW~~~~~~  445 (475)
T KOG0615|consen  376 SGYPPFSEEYTDPSLKEQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNHPWFKDAPC  445 (475)
T ss_pred             ccCCCcccccCCccHHHHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcChhhhcccc
Confidence            9999998876655 88899999999999999999999999999999999999999999999999997653

>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.1e-43  Score=340.52  Aligned_cols=206  Identities=28%  Similarity=0.527  Sum_probs=181.5

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH   85 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~   85 (429)
                      ++++.|+|++.+.+.++.      ..++      |+|+|+|..|+|.+++.+  .+.++|.+++.+++||+.||.|||++
T Consensus        72 Hr~L~HpnIV~f~~~FED------s~nV------YivLELC~~~sL~el~Kr--rk~ltEpEary~l~QIv~GlkYLH~~  137 (592)
T KOG0575|consen   72 HRSLKHPNIVQFYHFFED------SNNV------YIVLELCHRGSLMELLKR--RKPLTEPEARYFLRQIVEGLKYLHSL  137 (592)
T ss_pred             HHhcCCCcEEeeeeEeec------CCce------EEEEEecCCccHHHHHHh--cCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence            345566666666665554      3333      479999999999998864  47999999999999999999999999


Q ss_pred             CCeecCCCCCcEEEeecCCCCCEEEeecccceeccCC-CcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhC
Q 014171           86 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCG  163 (429)
Q Consensus        86 ~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g  163 (429)
                      +|+|||||..|++++   .+.++||+|||+|..+... +...+.||||.|.|||++.+ +.+..+||||+||++|.|++|
T Consensus       138 ~IiHRDLKLGNlfL~---~~~~VKIgDFGLAt~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G  214 (592)
T KOG0575|consen  138 GIIHRDLKLGNLFLN---ENMNVKIGDFGLATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVG  214 (592)
T ss_pred             Cceecccchhheeec---CcCcEEecccceeeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhC
Confidence            999999999999999   5889999999999998744 77889999999999999975 458999999999999999999


Q ss_pred             CCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCCC
Q 014171          164 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS  232 (429)
Q Consensus       164 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~~  232 (429)
                      ++||...+..+++.+|....+.+|.    .+|.++++||.+||+.||.+|||++++|.|+||+.+..+.
T Consensus       215 ~PPFetk~vkety~~Ik~~~Y~~P~----~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h~Ff~~g~~p~  279 (592)
T KOG0575|consen  215 RPPFETKTVKETYNKIKLNEYSMPS----HLSAEAKDLIRKLLRPNPSERPSLDEVLDHPFFKSGFTPA  279 (592)
T ss_pred             CCCcccchHHHHHHHHHhcCccccc----ccCHHHHHHHHHHhcCCcccCCCHHHHhcCHhhhCCCcCC
Confidence            9999999999999999999988876    6899999999999999999999999999999997655443

>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]

Probab=100.00  E-value=2.1e-44  Score=313.23  Aligned_cols=215  Identities=32%  Similarity=0.618  Sum_probs=186.6

Q ss_pred             eeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccceec
Q 014171           40 LRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI  119 (429)
Q Consensus        40 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~  119 (429)
                      ++|+|+|+-|.|++++.+.  -.++|...+.+++|+++|+.|||.++||||||||+|||++   ++..++|+|||+|+++
T Consensus        99 FlVFdl~prGELFDyLts~--VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILld---dn~~i~isDFGFa~~l  173 (411)
T KOG0599|consen   99 FLVFDLMPRGELFDYLTSK--VTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLD---DNMNIKISDFGFACQL  173 (411)
T ss_pred             hhhhhhcccchHHHHhhhh--eeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeec---cccceEEeccceeecc
Confidence            3699999999999999665  7899999999999999999999999999999999999999   6889999999999999


Q ss_pred             cCCCcccccccCCccccccccc-------CCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCC
Q 014171          120 KPGKKFQDIVGSAYYVAPEVLK-------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP  192 (429)
Q Consensus       120 ~~~~~~~~~~g~~~y~aPE~~~-------~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  192 (429)
                      .++......||||+|+|||.+.       .+|+..+|+||+||++|.++.|.+|||....-.+++.|+.+.+.|..+.|.
T Consensus       174 ~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speWa  253 (411)
T KOG0599|consen  174 EPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEWA  253 (411)
T ss_pred             CCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcchh
Confidence            9999999999999999999984       246888999999999999999999999998888999999999999999999


Q ss_pred             CCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCCC--CCC--cChHHHHhhHHhhhhhHHHHHHHH
Q 014171          193 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS--EIP--IDISVLNNMRQFVKYSRLKQFALR  259 (429)
Q Consensus       193 ~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~~--~~~--~~~~~l~~~~~~~~~~~~~~~~l~  259 (429)
                      ++|...++||++||+.||.+|+|++|+|+||||.......  .+.  .....++.-..++.+.+|+-+++.
T Consensus       254 dis~~~KdLIsrlLqVdp~~Ritake~LaHpff~q~~~~~~r~msP~~~~~~~k~qt~~~aRkrFk~ail~  324 (411)
T KOG0599|consen  254 DISATVKDLISRLLQVDPTKRITAKEALAHPFFIQIAQQQARQMSPVVEVELVKDQTSERARKRFKVAILT  324 (411)
T ss_pred             hccccHHHHHHHHHeeCchhcccHHHHhcChHHHHHHHhcccccCCCcchhhhhhhhhHHhhhheeeeeeh
Confidence            9999999999999999999999999999999996532211  111  123334444445555566554433

>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=100.00  E-value=4.1e-42  Score=329.56  Aligned_cols=242  Identities=54%  Similarity=0.923  Sum_probs=217.3

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCC-CCCEEEeecccc
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE-DSSLKATDFGLS  116 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~-~~~~kL~Dfg~a  116 (429)
                      ..|+|||+|.||.|++.+...   .++|..+..+++|++.|++|||+.||+||||||+|+|+..... ++.+|++|||+|
T Consensus       110 ~~~lvmEL~~GGeLfd~i~~~---~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla  186 (382)
T KOG0032|consen  110 SVYLVMELCEGGELFDRIVKK---HYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLA  186 (382)
T ss_pred             eEEEEEEecCCchHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCc
Confidence            346899999999999999776   3999999999999999999999999999999999999997543 458999999999


Q ss_pred             eeccCCCcccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          117 DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       117 ~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      .....+......+||+.|+|||++. ..++..+|+||+||++|.|++|.+||++.+......++..+.+.+..+.|+.++
T Consensus       187 ~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~~is  266 (382)
T KOG0032|consen  187 KFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWDDIS  266 (382)
T ss_pred             eEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCccccC
Confidence            9988877788899999999999998 688999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCCCCCCcChHHHHhhHHhhhhhHHHHHHHHhhhcccchHHHhhhhc
Q 014171          196 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRD  275 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~  275 (429)
                      ..++++|.+||..||.+|+|+.++|+|||++.................+.++...+++++..++......+   +..++.
T Consensus       267 ~~akd~i~~ll~~dp~~R~ta~~~L~HpWi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  343 (382)
T KOG0032|consen  267 ESAKDFIRKLLEFDPRKRLTAAQALQHPWIKSIGEATNIPLDISVLSRSKQFLSMSKLKKLALRVLAESLS---ISGLKE  343 (382)
T ss_pred             HHHHHHHHHhcccCcccCCCHHHHhcCccccCCcccccccccchhhhhHHHHHHHHHHHHHHHHHHhhhhh---HHHHHH
Confidence            99999999999999999999999999999998766666666666677778888888888777666666655   677888


Q ss_pred             cccccCCCCC
Q 014171          276 QFDAIDVDKN  285 (429)
Q Consensus       276 ~F~~~D~~~~  285 (429)
                      .|...|.+++
T Consensus       344 ~~~~~~~~~~  353 (382)
T KOG0032|consen  344 MFKLMDTDNN  353 (382)
T ss_pred             HHHhhccccc
Confidence            8998888777

>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]

Probab=100.00  E-value=5e-43  Score=318.30  Aligned_cols=210  Identities=25%  Similarity=0.343  Sum_probs=171.5

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-C
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-H   85 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~-~   85 (429)
                      ++++..+..+++.++..|+.+.++..     ..+++||||.||+|..++...  ++++|..+..++.+|++||.|||. .
T Consensus       126 rEl~il~~~~spyIV~~ygaF~~~~~-----~isI~mEYMDgGSLd~~~k~~--g~i~E~~L~~ia~~VL~GL~YLh~~~  198 (364)
T KOG0581|consen  126 RELEILRSCQSPYIVGFYGAFYSNGE-----EISICMEYMDGGSLDDILKRV--GRIPEPVLGKIARAVLRGLSYLHEER  198 (364)
T ss_pred             HHHHHHhhCCCCCeeeEeEEEEeCCc-----eEEeehhhcCCCCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhcc
Confidence            33344444455555555443333332     134799999999999998655  789999999999999999999996 9


Q ss_pred             CCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCC
Q 014171           86 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGR  164 (429)
Q Consensus        86 ~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~  164 (429)
                      +|+||||||+|||++   ..+.+||||||.+..+... ...+.+||..|||||.+.+ .|+.++||||||++++|+++|+
T Consensus       199 ~IIHRDIKPsNlLvN---skGeVKicDFGVS~~lvnS-~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~Gr  274 (364)
T KOG0581|consen  199 KIIHRDIKPSNLLVN---SKGEVKICDFGVSGILVNS-IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGR  274 (364)
T ss_pred             CeeeccCCHHHeeec---cCCCEEeccccccHHhhhh-hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCC
Confidence            999999999999999   4899999999999887765 6688899999999999986 6799999999999999999999


Q ss_pred             CCCCCC-----ChhHHHHHHHhcCCCCCCCCCC-CCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          165 RPFWDK-----TEDGIFKEVLRNKPDFRRKPWP-SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       165 ~pf~~~-----~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                      .||...     ...+.+..|+.+.+.-   .+. ..|+++++||.+||+.||.+|||++|+++|||++....
T Consensus       275 fP~~~~~~~~~~~~~Ll~~Iv~~ppP~---lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~Hpfi~~~~~  343 (364)
T KOG0581|consen  275 FPYPPPNPPYLDIFELLCAIVDEPPPR---LPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQHPFIKKFED  343 (364)
T ss_pred             CCCCCcCCCCCCHHHHHHHHhcCCCCC---CCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcCHHHhhccc
Confidence            999764     4456667777654322   223 38999999999999999999999999999999997643

>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-42  Score=328.26  Aligned_cols=213  Identities=31%  Similarity=0.544  Sum_probs=181.2

Q ss_pred             eeccccccccc-ccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH
Q 014171            5 LIGDTRSANCL-DMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH   83 (429)
Q Consensus         5 ~~~~~~~~n~~-~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH   83 (429)
                      ...+....+.+ .|++++..+..+.....      -|+|+||+++|+|+++|.+.  +.|++..++.++.||+.||+|||
T Consensus       120 V~~Ek~~l~~L~~hPgivkLy~TFQD~~s------LYFvLe~A~nGdll~~i~K~--Gsfde~caR~YAAeIldAleylH  191 (604)
T KOG0592|consen  120 VTREKEALTQLSGHPGIVKLYFTFQDEES------LYFVLEYAPNGDLLDLIKKY--GSFDETCARFYAAEILDALEYLH  191 (604)
T ss_pred             hhHHHHHHHHhhCCCCeEEEEEEeecccc------eEEEEEecCCCcHHHHHHHh--CcchHHHHHHHHHHHHHHHHHHH
Confidence            33333444444 66666666433333333      35799999999999999666  89999999999999999999999


Q ss_pred             HCCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc--------------ccccccCCcccccccccCCC-CCCc
Q 014171           84 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK--------------FQDIVGSAYYVAPEVLKRKS-GPES  148 (429)
Q Consensus        84 ~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~--------------~~~~~g~~~y~aPE~~~~~~-~~~~  148 (429)
                      ++|||||||||+|||++   .+++++|.|||.|+.+.+...              ..+.+||..|.+||+|.... ++.+
T Consensus       192 ~~GIIHRDlKPENILLd---~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~s  268 (604)
T KOG0592|consen  192 SNGIIHRDLKPENILLD---KDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSS  268 (604)
T ss_pred             hcCceeccCChhheeEc---CCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCccc
Confidence            99999999999999999   689999999999987653211              14579999999999998655 8899


Q ss_pred             chHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          149 DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       149 DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      |+|||||++|+|+.|++||.+.++..+.++|+.-.+.|++    ..++.+++||.++|..||++|+|++++.+||||...
T Consensus       269 DiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~fp~----~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~HpFF~~V  344 (604)
T KOG0592|consen  269 DLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYEFPE----GFPEDARDLIKKLLVRDPSDRLTSQQIKAHPFFEGV  344 (604)
T ss_pred             chHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhcccCCC----CCCHHHHHHHHHHHccCccccccHHHHhhCcccccC
Confidence            9999999999999999999999999999999999988875    578999999999999999999999999999999987


Q ss_pred             CCCC
Q 014171          229 GDAS  232 (429)
Q Consensus       229 ~~~~  232 (429)
                      ....
T Consensus       345 dw~n  348 (604)
T KOG0592|consen  345 DWEN  348 (604)
T ss_pred             Chhh
Confidence            6443

>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=1.7e-41  Score=326.75  Aligned_cols=205  Identities=32%  Similarity=0.572  Sum_probs=180.6

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH   85 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~   85 (429)
                      |+-+.|+|+++++.+.      ....+++      +|+||++||.|++++.++  +++++.+++++++||+.|+.|||..
T Consensus        66 MkLi~HpnVl~LydVw------e~~~~ly------lvlEyv~gGELFdylv~k--G~l~e~eaa~ff~QIi~gv~yCH~~  131 (786)
T KOG0588|consen   66 MKLIEHPNVLRLYDVW------ENKQHLY------LVLEYVPGGELFDYLVRK--GPLPEREAAHFFRQILDGVSYCHAF  131 (786)
T ss_pred             HHHhcCCCeeeeeeee------ccCceEE------EEEEecCCchhHHHHHhh--CCCCCHHHHHHHHHHHHHHHHHhhh
Confidence            3344555555544433      3344444      699999999999999766  8999999999999999999999999


Q ss_pred             CCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccCC-C-CCCcchHHHHHHHHHHhhC
Q 014171           86 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-S-GPESDVWSIGVITYILLCG  163 (429)
Q Consensus        86 ~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~~-~-~~~~DiwslG~il~~l~~g  163 (429)
                      +|+|||+||+|+|++.   .+.+||+|||+|....++....+.||+|.|+|||++.+. | +.++||||+|||||.|+||
T Consensus       132 ~icHRDLKpENlLLd~---~~nIKIADFGMAsLe~~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG  208 (786)
T KOG0588|consen  132 NICHRDLKPENLLLDV---KNNIKIADFGMASLEVPGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTG  208 (786)
T ss_pred             cceeccCCchhhhhhc---ccCEeeeccceeecccCCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhC
Confidence            9999999999999994   556999999999988888888999999999999999864 4 8899999999999999999


Q ss_pred             CCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCC
Q 014171          164 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA  231 (429)
Q Consensus       164 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~  231 (429)
                      +.||.+.+-..++.++..+.+.+|    ..++.++++||.+||.+||.+|+|.+++++|||+..+...
T Consensus       209 ~LPFdDdNir~LLlKV~~G~f~MP----s~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP~l~g~~~~  272 (786)
T KOG0588|consen  209 KLPFDDDNIRVLLLKVQRGVFEMP----SNISSEAQDLLRRMLDVDPSTRITTEEILKHPFLSGYTSL  272 (786)
T ss_pred             CCCCCCccHHHHHHHHHcCcccCC----CcCCHHHHHHHHHHhccCccccccHHHHhhCchhhcCCCC
Confidence            999999999999999999999887    4689999999999999999999999999999999986543

>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2e-41  Score=325.00  Aligned_cols=180  Identities=38%  Similarity=0.737  Sum_probs=165.9

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCC-CCEEEeecccce
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED-SSLKATDFGLSD  117 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~-~~~kL~Dfg~a~  117 (429)
                      .|+|||||.||+|++++.+  .++++|..++.+++|+++|++|||++||+||||||+|||++.   + +.+||+|||++.
T Consensus        95 ~~ivmEy~~gGdL~~~i~~--~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~---~~~~~Kl~DFG~s~  169 (370)
T KOG0583|consen   95 IYIVMEYCSGGDLFDYIVN--KGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDG---NEGNLKLSDFGLSA  169 (370)
T ss_pred             EEEEEEecCCccHHHHHHH--cCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecC---CCCCEEEecccccc
Confidence            4579999999999999977  389999999999999999999999999999999999999994   4 899999999999


Q ss_pred             ec-cCCCcccccccCCcccccccccC-C-C-CCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          118 FI-KPGKKFQDIVGSAYYVAPEVLKR-K-S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       118 ~~-~~~~~~~~~~g~~~y~aPE~~~~-~-~-~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      .. .......+.+||+.|+|||++.+ . | +.++||||+||+||.|++|..||...+...++.++..+...++.    .
T Consensus       170 ~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~~~~~p~----~  245 (370)
T KOG0583|consen  170 ISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKGEFKIPS----Y  245 (370)
T ss_pred             ccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcCCccCCC----C
Confidence            88 46677788999999999999986 3 4 68999999999999999999999999888999998888877764    4


Q ss_pred             C-CHHHHHHHHHhccCCccCcCCHHHHhCCCcccc
Q 014171          194 I-SNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE  227 (429)
Q Consensus       194 ~-~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~  227 (429)
                      + |.+++.|+.+||..||.+|+|+.+++.||||+.
T Consensus       246 ~~S~~~~~Li~~mL~~~P~~R~t~~~i~~h~w~~~  280 (370)
T KOG0583|consen  246 LLSPEARSLIEKMLVPDPSTRITLLEILEHPWFQK  280 (370)
T ss_pred             cCCHHHHHHHHHHcCCCcccCCCHHHHhhChhhcc
Confidence            5 999999999999999999999999999999997

>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]

Probab=100.00  E-value=6.4e-41  Score=295.04  Aligned_cols=195  Identities=35%  Similarity=0.678  Sum_probs=179.1

Q ss_pred             eEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccceecc
Q 014171           41 RRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK  120 (429)
Q Consensus        41 lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~  120 (429)
                      +|||.++||.|+.++..+....++|.++..|++||+.|+.|||+.+|.||||||+|+|++....+..+||+|||+|+...
T Consensus       136 iVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~  215 (400)
T KOG0604|consen  136 IVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQ  215 (400)
T ss_pred             eeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccC
Confidence            69999999999999999888889999999999999999999999999999999999999988888899999999999887


Q ss_pred             CCCcccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhhCCCCCCCCC----hhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          121 PGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKT----EDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       121 ~~~~~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~----~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      ......+.+.||+|.|||++. .+|...+|+||+||++|-|++|.+||+...    ..++..+|..+.+.|+.+.|..+|
T Consensus       216 ~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEWs~VS  295 (400)
T KOG0604|consen  216 EPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEWSCVS  295 (400)
T ss_pred             CCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhHhHHH
Confidence            667777889999999999995 467889999999999999999999998764    456788999999999999999999


Q ss_pred             HHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCCCCCC
Q 014171          196 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP  235 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~~~~~  235 (429)
                      ++.+++|+++|..+|.+|.|+.+++.|||+.........+
T Consensus       296 e~aKdlIR~LLkt~PteRlTI~~~m~hpwi~~~~~vp~tp  335 (400)
T KOG0604|consen  296 EAAKDLIRKLLKTEPTERLTIEEVMDHPWINQYEAVPQTP  335 (400)
T ss_pred             HHHHHHHHHHhcCCchhheeHHHhhcCchhcccccCCCCC
Confidence            9999999999999999999999999999999875544433

>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-40  Score=302.56  Aligned_cols=183  Identities=31%  Similarity=0.588  Sum_probs=163.7

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      -|+|+||+.||.|...|.+  ++.++|..++.++.+|+.||.|||++|||||||||+|||++   ..|+++|+|||+++.
T Consensus       100 LylVld~~~GGeLf~hL~~--eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd---~~GHi~LtDFgL~k~  174 (357)
T KOG0598|consen  100 LYLVLDYLNGGELFYHLQR--EGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLD---EQGHIKLTDFGLCKE  174 (357)
T ss_pred             EEEEEeccCCccHHHHHHh--cCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeec---CCCcEEEeccccchh
Confidence            3579999999999998854  48999999999999999999999999999999999999999   689999999999984


Q ss_pred             -ccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCH
Q 014171          119 -IKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN  196 (429)
Q Consensus       119 -~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  196 (429)
                       ...+....+.+||+.|+|||++.+ +++.++|+||+|+++|+|++|.+||.+.+...++.+|..+....++   .-++.
T Consensus       175 ~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p---~~ls~  251 (357)
T KOG0598|consen  175 DLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPP---GYLSE  251 (357)
T ss_pred             cccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCC---ccCCH
Confidence             444556677899999999999864 6799999999999999999999999999999999999988743332   23799


Q ss_pred             HHHHHHHHhccCCccCcC----CHHHHhCCCccccCC
Q 014171          197 SAKDFVKKLLVKDPRARL----TAAQALSHPWVREGG  229 (429)
Q Consensus       197 ~~~~li~~~l~~dp~~R~----s~~e~l~h~~~~~~~  229 (429)
                      ++++++.++|..||++|.    ++.++-+||||+...
T Consensus       252 ~ardll~~LL~rdp~~RLg~~~d~~~ik~HpfF~~in  288 (357)
T KOG0598|consen  252 EARDLLKKLLKRDPRQRLGGPGDAEEIKRHPFFKGIN  288 (357)
T ss_pred             HHHHHHHHHhccCHHHhcCCCCChHHhhcCcccccCC
Confidence            999999999999999995    688999999999764

>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-40  Score=305.10  Aligned_cols=211  Identities=26%  Similarity=0.510  Sum_probs=182.1

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH   85 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~   85 (429)
                      +++++|+|++.++.+++.            +...|||||||.||+|.+++.++  +.++|..++.++.||+.||++||++
T Consensus        63 Lkel~H~nIV~l~d~~~~------------~~~i~lVMEyC~gGDLs~yi~~~--~~l~e~t~r~Fm~QLA~alq~L~~~  128 (429)
T KOG0595|consen   63 LKELKHPNIVRLLDCIED------------DDFIYLVMEYCNGGDLSDYIRRR--GRLPEATARHFMQQLASALQFLHEN  128 (429)
T ss_pred             HHhcCCcceeeEEEEEec------------CCeEEEEEEeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            456677777777665553            23456899999999999999666  7999999999999999999999999


Q ss_pred             CCeecCCCCCcEEEeecCCC---CCEEEeecccceeccCCCcccccccCCcccccccc-cCCCCCCcchHHHHHHHHHHh
Q 014171           86 GLVHRDMKPENFLFKSAKED---SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITYILL  161 (429)
Q Consensus        86 ~i~H~dikp~Nil~~~~~~~---~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~-~~~~~~~~DiwslG~il~~l~  161 (429)
                      +||||||||.|||++.....   -.+||+|||+|+.+.++....+.+|+|.|||||++ ..+|+.|+|+||+|+++|+|+
T Consensus       129 ~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l  208 (429)
T KOG0595|consen  129 NIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCL  208 (429)
T ss_pred             CeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHH
Confidence            99999999999999975222   57899999999999988888899999999999999 578999999999999999999


Q ss_pred             hCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCC
Q 014171          162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA  231 (429)
Q Consensus       162 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~  231 (429)
                      +|++||...+..+....+..+....+. ....++....+++...+..+|.+|.+..+-+.|++.......
T Consensus       209 ~g~~Pf~a~t~~eL~~~~~k~~~~~~~-~~~~~s~~~~~Ll~~ll~~~~~~~~~~~~~~~~~~l~~~p~~  277 (429)
T KOG0595|consen  209 TGKPPFDAETPKELLLYIKKGNEIVPV-LPAELSNPLRELLISLLQRNPKDRISFEDFFDHPFLAANPQD  277 (429)
T ss_pred             hCCCCccccCHHHHHHHHhccccccCc-hhhhccCchhhhhhHHHhcCccccCchHHhhhhhhcccCccc
Confidence            999999999999999887776654433 224567788899999999999999999999999999876543

>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]

Probab=100.00  E-value=1.6e-40  Score=292.38  Aligned_cols=180  Identities=29%  Similarity=0.550  Sum_probs=165.9

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .||||||.+||.|..++.+.  +++++..++.++.||+.||+|||+++|++|||||+|||++   .+|++||+|||+|+.
T Consensus       119 lymvmeyv~GGElFS~Lrk~--~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD---~~G~iKitDFGFAK~  193 (355)
T KOG0616|consen  119 LYMVMEYVPGGELFSYLRKS--GRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLD---QNGHIKITDFGFAKR  193 (355)
T ss_pred             EEEEEeccCCccHHHHHHhc--CCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeec---cCCcEEEEeccceEE
Confidence            36899999999999999554  7999999999999999999999999999999999999999   589999999999998


Q ss_pred             ccCCCcccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHH
Q 014171          119 IKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS  197 (429)
Q Consensus       119 ~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  197 (429)
                      +...  ..+.||||.|+|||++. ++++.++|.|||||++|||+.|.+||.+.+...++.+|+.+...+|.    .++.+
T Consensus       194 v~~r--T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~fP~----~fs~~  267 (355)
T KOG0616|consen  194 VSGR--TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKFPS----YFSSD  267 (355)
T ss_pred             ecCc--EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccCCc----ccCHH
Confidence            8644  57899999999999987 46799999999999999999999999999999999999999998875    57999


Q ss_pred             HHHHHHHhccCCccCcC-----CHHHHhCCCccccCC
Q 014171          198 AKDFVKKLLVKDPRARL-----TAAQALSHPWVREGG  229 (429)
Q Consensus       198 ~~~li~~~l~~dp~~R~-----s~~e~l~h~~~~~~~  229 (429)
                      +++||.++|+.|-.+|.     ...++..||||+...
T Consensus       268 ~kdLl~~LL~vD~t~R~gnlknG~~dIk~H~wF~~v~  304 (355)
T KOG0616|consen  268 AKDLLKKLLQVDLTKRFGNLKNGVEDIKNHPWFKGVD  304 (355)
T ss_pred             HHHHHHHHHhhhhHhhhcCcCCCccccccCccccccc
Confidence            99999999999999994     567899999999754

>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=1.3e-40  Score=307.31  Aligned_cols=215  Identities=28%  Similarity=0.410  Sum_probs=167.6

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG   86 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~   86 (429)
                      ++.+....+++++||+.++.......    ...++.||||+||+|.+++.+..+ .+++..++.+.+||++||.|||++|
T Consensus        63 ~Ei~iL~~l~~p~IV~~~G~~~~~~~----~~~~i~mEy~~~GsL~~~~~~~g~-~l~E~~v~~ytr~iL~GL~ylHs~g  137 (313)
T KOG0198|consen   63 REIRILSRLNHPNIVQYYGSSSSREN----DEYNIFMEYAPGGSLSDLIKRYGG-KLPEPLVRRYTRQILEGLAYLHSKG  137 (313)
T ss_pred             HHHHHHHhCCCCCEEeeCCccccccC----eeeEeeeeccCCCcHHHHHHHcCC-CCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            34444455556666666554222111    234578999999999999987754 8999999999999999999999999


Q ss_pred             CeecCCCCCcEEEeecCCCCCEEEeecccceeccC----CCcccccccCCcccccccccCCC--CCCcchHHHHHHHHHH
Q 014171           87 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP----GKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYIL  160 (429)
Q Consensus        87 i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~----~~~~~~~~g~~~y~aPE~~~~~~--~~~~DiwslG~il~~l  160 (429)
                      |+||||||+|||++.  .++.+||+|||.+.....    ........||+.|+|||++....  .+++||||+||++.||
T Consensus       138 ~vH~DiK~~NiLl~~--~~~~~KlaDFG~a~~~~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM  215 (313)
T KOG0198|consen  138 IVHCDIKPANILLDP--SNGDVKLADFGLAKKLESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEM  215 (313)
T ss_pred             EeccCcccceEEEeC--CCCeEEeccCccccccccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEec
Confidence            999999999999993  158999999999987663    12234578999999999998443  3499999999999999


Q ss_pred             hhCCCCCCCC-ChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          161 LCGRRPFWDK-TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       161 ~~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                      +||++||... ......-.+....  ..+..+..+|.++++||.+||..+|.+||||+++|+|||.+....
T Consensus       216 ~Tg~~PW~~~~~~~~~~~~ig~~~--~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~~~~~~  284 (313)
T KOG0198|consen  216 LTGKPPWSEFFEEAEALLLIGRED--SLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFLKQNSI  284 (313)
T ss_pred             cCCCCcchhhcchHHHHHHHhccC--CCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhhhcccc
Confidence            9999999773 3333333444333  122444679999999999999999999999999999999987543

>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.4e-40  Score=313.26  Aligned_cols=204  Identities=29%  Similarity=0.513  Sum_probs=172.1

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH   85 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~   85 (429)
                      +++.+|+|+++++..+-.           . ..-|+||||++||+|.+.+...   .++|.+++.++++++.||+|||.+
T Consensus       324 m~~~~H~NiVnfl~Sylv-----------~-deLWVVMEym~ggsLTDvVt~~---~~~E~qIA~Icre~l~aL~fLH~~  388 (550)
T KOG0578|consen  324 MRDLHHPNIVNFLDSYLV-----------G-DELWVVMEYMEGGSLTDVVTKT---RMTEGQIAAICREILQGLKFLHAR  388 (550)
T ss_pred             HHhccchHHHHHHHHhcc-----------c-ceeEEEEeecCCCchhhhhhcc---cccHHHHHHHHHHHHHHHHHHHhc
Confidence            456677777776654332           1 4457899999999999988544   699999999999999999999999


Q ss_pred             CCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCC-cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhC
Q 014171           86 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCG  163 (429)
Q Consensus        86 ~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g  163 (429)
                      ||+|||||.+|||++   .++.+||+|||++..+.... ...+.+|||+|||||+... .|++++||||||+++.||+.|
T Consensus       389 gIiHrDIKSDnILL~---~~g~vKltDFGFcaqi~~~~~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveG  465 (550)
T KOG0578|consen  389 GIIHRDIKSDNILLT---MDGSVKLTDFGFCAQISEEQSKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEG  465 (550)
T ss_pred             ceeeeccccceeEec---cCCcEEEeeeeeeeccccccCccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcC
Confidence            999999999999999   58889999999998887655 5678899999999999974 679999999999999999999


Q ss_pred             CCCCCCCChhHHHHHHH-hcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          164 RRPFWDKTEDGIFKEVL-RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       164 ~~pf~~~~~~~~~~~i~-~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      .+||...++-..+..|. .+.+.+  ..+..+|..+++|+.+||+.|+.+|++|.++|+||||+...
T Consensus       466 EPPYlnE~PlrAlyLIa~ng~P~l--k~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~HpFl~~a~  530 (550)
T KOG0578|consen  466 EPPYLNENPLRALYLIATNGTPKL--KNPEKLSPELKDFLDRCLVVDVEQRASAKELLEHPFLKMAK  530 (550)
T ss_pred             CCCccCCChHHHHHHHhhcCCCCc--CCccccCHHHHHHHHHHhhcchhcCCCHHHHhcChhhhhcC
Confidence            99998766655555554 344333  33467999999999999999999999999999999996543

>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=5.8e-40  Score=286.76  Aligned_cols=201  Identities=24%  Similarity=0.419  Sum_probs=168.8

Q ss_pred             ecccccccccccccccccCC-CCCCcceeeccccceeEeeecCCCChHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHH
Q 014171            6 IGDTRSANCLDMVNLVTPML-PPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKK--DSRYTEKDAAVVVRQMLRVAAEC   82 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~-~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~l   82 (429)
                      ++++....+++|+||++.+. ........+     ++|||||.+|+|...+.+.+  ...++|..++.++.|+|.||..|
T Consensus        66 v~Ei~lLkQL~HpNIVqYy~~~f~~~~evl-----nivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~c  140 (375)
T KOG0591|consen   66 VKEISLLKQLNHPNIVQYYAHSFIEDNEVL-----NIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHC  140 (375)
T ss_pred             HHHHHHHHhcCCchHHHHHHHhhhccchhh-----HHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHH
Confidence            45566667788888888776 333333322     47899999999999886543  35699999999999999999999


Q ss_pred             HH--CC--CeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc-ccccccCCccccccccc-CCCCCCcchHHHHHH
Q 014171           83 HL--HG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVI  156 (429)
Q Consensus        83 H~--~~--i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~i  156 (429)
                      |.  .+  |+||||||.||+++   .+|.+||+|||+++.+..... ..+.+|||+||+||.+. .+|+.+|||||+||+
T Consensus       141 H~~~~r~~VmHRDIKPaNIFl~---~~gvvKLGDfGL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCl  217 (375)
T KOG0591|consen  141 HSKIPRGTVMHRDIKPANIFLT---ANGVVKLGDFGLGRFLSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCL  217 (375)
T ss_pred             hccccccceeeccCcchheEEc---CCCceeeccchhHhHhcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHH
Confidence            99  45  99999999999999   689999999999998875544 35679999999999986 578999999999999


Q ss_pred             HHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCH
Q 014171          157 TYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA  216 (429)
Q Consensus       157 l~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~  216 (429)
                      +|||+.-++||.+.+-.+...+|..+...  +-+-..+|.++..+|..|+.+||..||+.
T Consensus       218 lyEMcaL~~PF~g~n~~~L~~KI~qgd~~--~~p~~~YS~~l~~li~~ci~vd~~~RP~t  275 (375)
T KOG0591|consen  218 LYEMCALQSPFYGDNLLSLCKKIEQGDYP--PLPDEHYSTDLRELINMCIAVDPEQRPDT  275 (375)
T ss_pred             HHHHHhcCCCcccccHHHHHHHHHcCCCC--CCcHHHhhhHHHHHHHHHccCCcccCCCc
Confidence            99999999999999999999999988543  22224578999999999999999999986

>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]

Probab=100.00  E-value=1.5e-39  Score=286.98  Aligned_cols=206  Identities=26%  Similarity=0.500  Sum_probs=168.9

Q ss_pred             eecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 014171            5 LIGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL   84 (429)
Q Consensus         5 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~   84 (429)
                      ++++++|+|.++++..+..      .-.      -+||+|||+. ++++.+.+.. ..++...+..++.|++.|+.|||+
T Consensus        54 mLKqLkH~NLVnLiEVFrr------krk------lhLVFE~~dh-TvL~eLe~~p-~G~~~~~vk~~l~Q~l~ai~~cHk  119 (396)
T KOG0593|consen   54 MLKQLKHENLVNLIEVFRR------KRK------LHLVFEYCDH-TVLHELERYP-NGVPSELVKKYLYQLLKAIHFCHK  119 (396)
T ss_pred             HHHhcccchHHHHHHHHHh------cce------eEEEeeecch-HHHHHHHhcc-CCCCHHHHHHHHHHHHHHhhhhhh
Confidence            3556777777777666654      112      2479999996 6666665553 678999999999999999999999


Q ss_pred             CCCeecCCCCCcEEEeecCCCCCEEEeecccceecc-CCCcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHh
Q 014171           85 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILL  161 (429)
Q Consensus        85 ~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~-~~~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~  161 (429)
                      ++++||||||+|||++   .++.+||||||+|+.+. ++..+...+.|.+|+|||.+-+  +|++++||||+||++.||+
T Consensus       120 ~n~IHRDIKPENILit---~~gvvKLCDFGFAR~L~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~  196 (396)
T KOG0593|consen  120 NNCIHRDIKPENILIT---QNGVVKLCDFGFARTLSAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELL  196 (396)
T ss_pred             cCeecccCChhheEEe---cCCcEEeccchhhHhhcCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHh
Confidence            9999999999999999   58999999999999887 6667788899999999999976  6799999999999999999


Q ss_pred             hCCCCCCCCChhHHHHHHHhc--------------CCCC-----CC--------CCCCCCCHHHHHHHHHhccCCccCcC
Q 014171          162 CGRRPFWDKTEDGIFKEVLRN--------------KPDF-----RR--------KPWPSISNSAKDFVKKLLVKDPRARL  214 (429)
Q Consensus       162 ~g~~pf~~~~~~~~~~~i~~~--------------~~~~-----~~--------~~~~~~~~~~~~li~~~l~~dp~~R~  214 (429)
                      +|.+.|.|.++.+.+..|...              ++.|     |.        ..++.++.-+.+|+.+||..||.+|+
T Consensus       197 ~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~  276 (396)
T KOG0593|consen  197 TGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRL  276 (396)
T ss_pred             cCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccc
Confidence            999999999887766544432              1111     11        11355677889999999999999999


Q ss_pred             CHHHHhCCCcccc
Q 014171          215 TAAQALSHPWVRE  227 (429)
Q Consensus       215 s~~e~l~h~~~~~  227 (429)
                      +.+++|.|+||..
T Consensus       277 sc~qll~H~yFd~  289 (396)
T KOG0593|consen  277 SCEQLLHHPYFDG  289 (396)
T ss_pred             cHHHHhcChHHHH
Confidence            9999999999954

>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-38  Score=296.76  Aligned_cols=203  Identities=27%  Similarity=0.435  Sum_probs=170.9

Q ss_pred             cccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 014171           11 SANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR   90 (429)
Q Consensus        11 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~   90 (429)
                      |+|++.+..++...     ...+      |+|||||+ -+|.+++..+ +..|++..++.|+.||++||.|+|.+|+.||
T Consensus        68 hpniikL~Evi~d~-----~~~L------~fVfE~Md-~NLYqLmK~R-~r~fse~~irnim~QilqGL~hiHk~GfFHR  134 (538)
T KOG0661|consen   68 HPNIIKLKEVIRDN-----DRIL------YFVFEFMD-CNLYQLMKDR-NRLFSESDIRNIMYQILQGLAHIHKHGFFHR  134 (538)
T ss_pred             CCcchhhHHHhhcc-----CceE------eeeHHhhh-hhHHHHHhhc-CCcCCHHHHHHHHHHHHHHHHHHHhcCcccc
Confidence            66666665554431     1122      46899998 5999988766 7899999999999999999999999999999


Q ss_pred             CCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCccccccccc--CCCCCCcchHHHHHHHHHHhhCCCCCC
Q 014171           91 DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW  168 (429)
Q Consensus        91 dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~--~~~~~~~DiwslG~il~~l~~g~~pf~  168 (429)
                      |+||+|||+..   ...+||+|||+|+.+.....+...+.|++|+|||++.  +.|+.+.|+||+|||++|+.+-++.|.
T Consensus       135 DlKPENiLi~~---~~~iKiaDFGLARev~SkpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFP  211 (538)
T KOG0661|consen  135 DLKPENILISG---NDVIKIADFGLAREVRSKPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFP  211 (538)
T ss_pred             cCChhheEecc---cceeEecccccccccccCCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCC
Confidence            99999999983   6789999999999999988899999999999999985  467999999999999999999999999


Q ss_pred             CCChhHHHHHHHhcCCCCCCC--------------------------CCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          169 DKTEDGIFKEVLRNKPDFRRK--------------------------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       169 ~~~~~~~~~~i~~~~~~~~~~--------------------------~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      |.++.+.+.+|+.-.......                          ..+..+.++.++|.+|+..||.+||||+++|+|
T Consensus       212 G~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~  291 (538)
T KOG0661|consen  212 GASEIDQIYKICEVLGTPDKDSWPEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH  291 (538)
T ss_pred             CCcHHHHHHHHHHHhCCCccccchhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence            999988877776422111111                          124467899999999999999999999999999


Q ss_pred             CccccCC
Q 014171          223 PWVREGG  229 (429)
Q Consensus       223 ~~~~~~~  229 (429)
                      |||+...
T Consensus       292 pffq~~~  298 (538)
T KOG0661|consen  292 PFFQVGR  298 (538)
T ss_pred             ccccccc
Confidence            9999754

>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]

Probab=100.00  E-value=2.1e-38  Score=299.67  Aligned_cols=186  Identities=30%  Similarity=0.519  Sum_probs=163.2

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .||||||++||++..+|.+.  +.|++..++.++.+++.|++.+|+.|++||||||+|+|++   ..|++||+|||++..
T Consensus       216 LYLiMEylPGGD~mTLL~~~--~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD---~~GHiKLSDFGLs~g  290 (550)
T KOG0605|consen  216 LYLIMEYLPGGDMMTLLMRK--DTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLID---AKGHIKLSDFGLSTG  290 (550)
T ss_pred             eEEEEEecCCccHHHHHHhc--CcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeec---CCCCEeeccccccch
Confidence            36899999999999999665  8999999999999999999999999999999999999999   699999999999753


Q ss_pred             ccC-----------------------C-C-----cc-------------------cccccCCcccccccccC-CCCCCcc
Q 014171          119 IKP-----------------------G-K-----KF-------------------QDIVGSAYYVAPEVLKR-KSGPESD  149 (429)
Q Consensus       119 ~~~-----------------------~-~-----~~-------------------~~~~g~~~y~aPE~~~~-~~~~~~D  149 (429)
                      +..                       . .     ..                   ...+|||-|+|||++.+ +|+..+|
T Consensus       291 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cD  370 (550)
T KOG0605|consen  291 LDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECD  370 (550)
T ss_pred             hhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCcccc
Confidence            210                       0 0     00                   13579999999999975 5799999


Q ss_pred             hHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCC---HHHHhCCCccc
Q 014171          150 VWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT---AAQALSHPWVR  226 (429)
Q Consensus       150 iwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s---~~e~l~h~~~~  226 (429)
                      +||+|||+|||+.|.+||.+.++.+++++|......+..+.-..+++++++||.+||. ||.+|..   ++|+.+||||+
T Consensus       371 wWSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d~~~RLG~~G~~EIK~HPfF~  449 (550)
T KOG0605|consen  371 WWSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-DPENRLGSKGAEEIKKHPFFK  449 (550)
T ss_pred             HHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-CHHHhcCcccHHHHhcCCccc
Confidence            9999999999999999999999999999999887666665556789999999999999 9999984   89999999999


Q ss_pred             cCCC
Q 014171          227 EGGD  230 (429)
Q Consensus       227 ~~~~  230 (429)
                      ....
T Consensus       450 ~v~W  453 (550)
T KOG0605|consen  450 GVDW  453 (550)
T ss_pred             cCCc
Confidence            8653

>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=6.1e-38  Score=287.72  Aligned_cols=205  Identities=31%  Similarity=0.506  Sum_probs=174.5

Q ss_pred             cccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCC
Q 014171           15 LDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKP   94 (429)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp   94 (429)
                      ++|+-+...|.....+.++      |+|||||.||+|..+.+++.++.+++..++.++.+|+.||+|||..|||+|||||
T Consensus       134 lDHPFlPTLYa~fet~~~~------cl~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKP  207 (459)
T KOG0610|consen  134 LDHPFLPTLYASFETDKYS------CLVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKP  207 (459)
T ss_pred             cCCCccchhhheeecccee------EEEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCc
Confidence            4444444444444444444      4799999999999999999999999999999999999999999999999999999


Q ss_pred             CcEEEeecCCCCCEEEeecccceeccC---------------------------------C-C-----------------
Q 014171           95 ENFLFKSAKEDSSLKATDFGLSDFIKP---------------------------------G-K-----------------  123 (429)
Q Consensus        95 ~Nil~~~~~~~~~~kL~Dfg~a~~~~~---------------------------------~-~-----------------  123 (429)
                      +|||+.   ++|+|.|+||.++.....                                 . .                 
T Consensus       208 ENILvr---edGHIMLsDFDLS~~~~~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~  284 (459)
T KOG0610|consen  208 ENILVR---EDGHIMLSDFDLSLRCPVSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELV  284 (459)
T ss_pred             ceeEEe---cCCcEEeeeccccccCCCCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhh
Confidence            999999   699999999998643210                                 0 0                 


Q ss_pred             ------cccccccCCcccccccccCCC-CCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCH
Q 014171          124 ------KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN  196 (429)
Q Consensus       124 ------~~~~~~g~~~y~aPE~~~~~~-~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  196 (429)
                            .....+||-.|.|||++.+.. +.++|+|+|||++|||+.|..||.|.+..+++.+|+.....|+..+  .++.
T Consensus       285 aep~~~RSnSFVGThEYlAPEvI~G~GHgsAVDWWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~~l~Fp~~~--~vs~  362 (459)
T KOG0610|consen  285 AEPTGARSNSFVGTHEYLAPEVIRGEGHGSAVDWWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQPLKFPEEP--EVSS  362 (459)
T ss_pred             cCCCCccccccccccccccceeeecCCCCchhhHHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcCCCcCCCCC--cchh
Confidence                  012346888999999998754 8899999999999999999999999999999999999998887653  6889


Q ss_pred             HHHHHHHHhccCCccCcCC----HHHHhCCCccccCCC
Q 014171          197 SAKDFVKKLLVKDPRARLT----AAQALSHPWVREGGD  230 (429)
Q Consensus       197 ~~~~li~~~l~~dp~~R~s----~~e~l~h~~~~~~~~  230 (429)
                      .+++||+++|..||.+|..    |.|+-+||||+..+.
T Consensus       363 ~akDLIr~LLvKdP~kRlg~~rGA~eIK~HpFF~gVnW  400 (459)
T KOG0610|consen  363 AAKDLIRKLLVKDPSKRLGSKRGAAEIKRHPFFEGVNW  400 (459)
T ss_pred             HHHHHHHHHhccChhhhhccccchHHhhcCccccCCCh
Confidence            9999999999999999998    999999999998754

>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.5e-38  Score=290.90  Aligned_cols=219  Identities=27%  Similarity=0.410  Sum_probs=178.7

Q ss_pred             eecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 014171            5 LIGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL   84 (429)
Q Consensus         5 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~   84 (429)
                      +.++.......+|+|++..+      +.++..-.-|+||.|+.+|++++.+...-...++|..++.++++++.||.|||.
T Consensus        71 l~kE~~~msl~~HPNIv~~~------~sFvv~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~  144 (516)
T KOG0582|consen   71 LRKEVQTMSLIDHPNIVTYH------CSFVVDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQ  144 (516)
T ss_pred             HHHHHHHhhhcCCCCcceEE------EEEEecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHh
Confidence            34455556667777777763      223333445789999999999999988777789999999999999999999999


Q ss_pred             CCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc----c-cccccCCccccccccc---CCCCCCcchHHHHHH
Q 014171           85 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----F-QDIVGSAYYVAPEVLK---RKSGPESDVWSIGVI  156 (429)
Q Consensus        85 ~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~----~-~~~~g~~~y~aPE~~~---~~~~~~~DiwslG~i  156 (429)
                      +|.+|||||+.|||++   .+|.|||+|||.+..+...+.    . .+.+|+++|+|||++.   .+|+.|+||||||++
T Consensus       145 ~G~IHRdvKAgnILi~---~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGIT  221 (516)
T KOG0582|consen  145 NGHIHRDVKAGNILID---SDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGIT  221 (516)
T ss_pred             cCceecccccccEEEc---CCCcEEEcCceeeeeecccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHH
Confidence            9999999999999999   589999999998765543322    1 5668999999999964   468999999999999


Q ss_pred             HHHHhhCCCCCCCCChhHHHHHHHhcCCCCCC------CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          157 TYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       157 l~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~------~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                      ..||.+|..||....+-.++...+.+.+..+.      ......+..++++|..||+.||.+|||++++|+|+||+....
T Consensus       222 A~ELA~G~aPf~k~pPmkvLl~tLqn~pp~~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh~FFk~~k~  301 (516)
T KOG0582|consen  222 ACELAHGHAPFSKYPPMKVLLLTLQNDPPTLLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKHAFFKKAKS  301 (516)
T ss_pred             HHHHhcCCCCcccCChHHHHHHHhcCCCCCcccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhccHHHhhccc
Confidence            99999999999888877777666666653222      222345678999999999999999999999999999998765


Q ss_pred             CC
Q 014171          231 AS  232 (429)
Q Consensus       231 ~~  232 (429)
                      ..
T Consensus       302 ~~  303 (516)
T KOG0582|consen  302 KE  303 (516)
T ss_pred             hh
Confidence            43

>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=5.9e-38  Score=293.96  Aligned_cols=212  Identities=30%  Similarity=0.566  Sum_probs=186.8

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH   85 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~   85 (429)
                      +.+.|....++|+|++..|+.-      -.+...|||+|+-.||+|++||.++ ...+.|..+++|+.||+.|+.|||+.
T Consensus        65 fqEVRCMKLVQHpNiVRLYEVi------DTQTKlyLiLELGD~GDl~DyImKH-e~Gl~E~La~kYF~QI~~AI~YCHqL  137 (864)
T KOG4717|consen   65 FQEVRCMKLVQHPNIVRLYEVI------DTQTKLYLILELGDGGDLFDYIMKH-EEGLNEDLAKKYFAQIVHAISYCHQL  137 (864)
T ss_pred             HHHHHHHHHhcCcCeeeeeehh------cccceEEEEEEecCCchHHHHHHhh-hccccHHHHHHHHHHHHHHHHHHhhh
Confidence            3455566666777777665322      2245557899999999999999877 47899999999999999999999999


Q ss_pred             CCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccCC-C-CCCcchHHHHHHHHHHhhC
Q 014171           86 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-S-GPESDVWSIGVITYILLCG  163 (429)
Q Consensus        86 ~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~~-~-~~~~DiwslG~il~~l~~g  163 (429)
                      .+|||||||+|+.+..  +-|-+||.|||++..+.++....+.+|+..|-|||++.+. | .+++||||+|||||.+++|
T Consensus       138 HVVHRDLKPENVVFFE--KlGlVKLTDFGFSNkf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCG  215 (864)
T KOG4717|consen  138 HVVHRDLKPENVVFFE--KLGLVKLTDFGFSNKFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCG  215 (864)
T ss_pred             hhhcccCCcceeEEee--ecCceEeeeccccccCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhC
Confidence            9999999999998885  6789999999999999999999999999999999999864 4 7899999999999999999


Q ss_pred             CCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          164 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       164 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                      ++||...++.+.+.+|+...+..|    ..++.+|++||..||..||.+|.+.+++..++|++....
T Consensus       216 q~PFqeANDSETLTmImDCKYtvP----shvS~eCrdLI~sMLvRdPkkRAslEeI~s~~Wlq~~D~  278 (864)
T KOG4717|consen  216 QPPFQEANDSETLTMIMDCKYTVP----SHVSKECRDLIQSMLVRDPKKRASLEEIVSTSWLQAGDR  278 (864)
T ss_pred             CCccccccchhhhhhhhcccccCc----hhhhHHHHHHHHHHHhcCchhhccHHHHhccccccCCCC
Confidence            999999999999999998887665    468999999999999999999999999999999998653

>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=7.8e-38  Score=285.61  Aligned_cols=206  Identities=29%  Similarity=0.516  Sum_probs=185.8

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG   86 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~   86 (429)
                      ++++....+||++|++.|..+.+...|+      +||||..+|.|.+|+.++  +.|+|.+++.+++||++|+.|||.++
T Consensus       102 REIeIMSsLNHPhII~IyEVFENkdKIv------ivMEYaS~GeLYDYiSer--~~LsErEaRhfFRQIvSAVhYCHknr  173 (668)
T KOG0611|consen  102 REIEIMSSLNHPHIIQIYEVFENKDKIV------IVMEYASGGELYDYISER--GSLSEREARHFFRQIVSAVHYCHKNR  173 (668)
T ss_pred             HHHHHHhhcCCCceeehhhhhcCCceEE------EEEEecCCccHHHHHHHh--ccccHHHHHHHHHHHHHHHHHHhhcc
Confidence            3455556678888888888888888888      699999999999999777  78999999999999999999999999


Q ss_pred             CeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccCC-C-CCCcchHHHHHHHHHHhhCC
Q 014171           87 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-S-GPESDVWSIGVITYILLCGR  164 (429)
Q Consensus        87 i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~~-~-~~~~DiwslG~il~~l~~g~  164 (429)
                      ++|||||.+|||++   .++.+||+|||++..+.......++||+|.|.+||++++. | ++.+|.||+||+||.++.|.
T Consensus       174 VvHRDLKLENILLD---~N~NiKIADFGLSNly~~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGt  250 (668)
T KOG0611|consen  174 VVHRDLKLENILLD---QNNNIKIADFGLSNLYADKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGT  250 (668)
T ss_pred             ceecccchhheeec---CCCCeeeeccchhhhhccccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcc
Confidence            99999999999999   5889999999999988888888999999999999999974 3 88999999999999999999


Q ss_pred             CCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          165 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       165 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      .||.|.+...+.+.|..+.+.-+.     .+.++..||+.||.+||.+|.|++++..|=|++-+
T Consensus       251 MPFDG~Dhk~lvrQIs~GaYrEP~-----~PSdA~gLIRwmLmVNP~RRATieDiAsHWWvNwg  309 (668)
T KOG0611|consen  251 MPFDGRDHKRLVRQISRGAYREPE-----TPSDASGLIRWMLMVNPERRATIEDIASHWWVNWG  309 (668)
T ss_pred             cccCCchHHHHHHHhhcccccCCC-----CCchHHHHHHHHHhcCcccchhHHHHhhhheeecc
Confidence            999999999999999988875443     46789999999999999999999999999998743

>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=7.2e-38  Score=291.35  Aligned_cols=207  Identities=30%  Similarity=0.597  Sum_probs=176.1

Q ss_pred             eecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCC-CCHHHHHHHHHHHHHHHHHHH
Q 014171            5 LIGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSR-YTEKDAAVVVRQMLRVAAECH   83 (429)
Q Consensus         5 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~-l~~~~~~~i~~qil~aL~~lH   83 (429)
                      +++.++|+|+++++.++..    +....+      |||+|||..|.+...-   ..+. +++.+++.|+++++.||+|||
T Consensus       161 ilKkl~H~nVV~LiEvLDD----P~s~~~------YlVley~s~G~v~w~p---~d~~els~~~Ar~ylrDvv~GLEYLH  227 (576)
T KOG0585|consen  161 ILKKLHHPNVVKLIEVLDD----PESDKL------YLVLEYCSKGEVKWCP---PDKPELSEQQARKYLRDVVLGLEYLH  227 (576)
T ss_pred             HHHhcCCcCeeEEEEeecC----cccCce------EEEEEeccCCccccCC---CCcccccHHHHHHHHHHHHHHHHHHH
Confidence            4678889999998888775    333344      4799999999886532   3345 999999999999999999999


Q ss_pred             HCCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCC------cccccccCCcccccccccCC-----CCCCcchHH
Q 014171           84 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK------KFQDIVGSAYYVAPEVLKRK-----SGPESDVWS  152 (429)
Q Consensus        84 ~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~------~~~~~~g~~~y~aPE~~~~~-----~~~~~Diws  152 (429)
                      .+||+||||||+|+|++   .++++||+|||.+.....+.      .....+|||.|+|||.+.+.     .+.+.||||
T Consensus       228 ~QgiiHRDIKPsNLLl~---~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWa  304 (576)
T KOG0585|consen  228 YQGIIHRDIKPSNLLLS---SDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWA  304 (576)
T ss_pred             hcCeeccccchhheEEc---CCCcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhh
Confidence            99999999999999999   57999999999988663321      12346899999999998652     267899999


Q ss_pred             HHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          153 IGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       153 lG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      +||+||.|+.|+.||.+....+++.+|......++..  +.+.+++++||.+||+.||.+|++..++..|||.....
T Consensus       305 lGVTLYCllfG~~PF~~~~~~~l~~KIvn~pL~fP~~--pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpwvt~~g  379 (576)
T KOG0585|consen  305 LGVTLYCLLFGQLPFFDDFELELFDKIVNDPLEFPEN--PEINEDLKDLIKRLLEKDPEQRITLPDIKLHPWVTRDG  379 (576)
T ss_pred             hhhhHHHhhhccCCcccchHHHHHHHHhcCcccCCCc--ccccHHHHHHHHHHhhcChhheeehhhheecceeccCC
Confidence            9999999999999999999999999999988777654  46789999999999999999999999999999998764

>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]

Probab=100.00  E-value=1.9e-37  Score=276.95  Aligned_cols=210  Identities=26%  Similarity=0.376  Sum_probs=174.2

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG   86 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~   86 (429)
                      ..++|+|++++-.++.-.    +-..      .|+|||||+. +|...+.+.+ .++.+.+++.++.|+++||+|||.+.
T Consensus       130 l~~~H~NIV~vkEVVvG~----~~d~------iy~VMe~~Eh-DLksl~d~m~-q~F~~~evK~L~~QlL~glk~lH~~w  197 (419)
T KOG0663|consen  130 LKARHPNIVEVKEVVVGS----NMDK------IYIVMEYVEH-DLKSLMETMK-QPFLPGEVKTLMLQLLRGLKHLHDNW  197 (419)
T ss_pred             HhcCCCCeeeeEEEEecc----ccce------eeeeHHHHHh-hHHHHHHhcc-CCCchHHHHHHHHHHHHHHHHHhhce
Confidence            366788888877766641    1112      3579999995 8888886654 78999999999999999999999999


Q ss_pred             CeecCCCCCcEEEeecCCCCCEEEeecccceeccCCC-cccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhC
Q 014171           87 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCG  163 (429)
Q Consensus        87 i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g  163 (429)
                      |+||||||+|+|++   ..|.+|++|||+|+.+.... .....+-|.+|+|||.+.+  .|+.+.|+||+|||+.||+++
T Consensus       198 ilHRDLK~SNLLm~---~~G~lKiaDFGLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~  274 (419)
T KOG0663|consen  198 ILHRDLKTSNLLLS---HKGILKIADFGLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQ  274 (419)
T ss_pred             eEecccchhheeec---cCCcEEecccchhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhc
Confidence            99999999999999   68999999999999887653 3566778999999999975  468999999999999999999


Q ss_pred             CCCCCCCChhHHHHHHHhcCCCCCCCCCCC----------------------------CCHHHHHHHHHhccCCccCcCC
Q 014171          164 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPS----------------------------ISNSAKDFVKKLLVKDPRARLT  215 (429)
Q Consensus       164 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~----------------------------~~~~~~~li~~~l~~dp~~R~s  215 (429)
                      ++.|.|.++...+.+|...........||.                            +++...+|+..+|.+||.+|.|
T Consensus       275 kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~t  354 (419)
T KOG0663|consen  275 KPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRIT  354 (419)
T ss_pred             CCCCCCCchHHHHHHHHHHhCCCccccCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCcccccc
Confidence            999999999988888776433323333322                            4577889999999999999999


Q ss_pred             HHHHhCCCccccCCCC
Q 014171          216 AAQALSHPWVREGGDA  231 (429)
Q Consensus       216 ~~e~l~h~~~~~~~~~  231 (429)
                      |+++|+|+||++.+.+
T Consensus       355 A~~~L~h~~F~e~P~p  370 (419)
T KOG0663|consen  355 AEDGLKHEYFRETPLP  370 (419)
T ss_pred             HHHhhcccccccCCCC
Confidence            9999999999996543

>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1e-37  Score=282.67  Aligned_cols=215  Identities=29%  Similarity=0.509  Sum_probs=168.6

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH   85 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~   85 (429)
                      ++..+|+|++.+..++..  +.....     ...|+|+|+++ -+|...+..+  ..+++..+..++.|++.||+|+|+.
T Consensus        75 Lr~~~HeNIi~l~di~~p--~~~~~f-----~DvYiV~elMe-tDL~~iik~~--~~L~d~H~q~f~YQiLrgLKyiHSA  144 (359)
T KOG0660|consen   75 LRHLRHENIIGLLDIFRP--PSRDKF-----NDVYLVFELME-TDLHQIIKSQ--QDLTDDHAQYFLYQILRGLKYIHSA  144 (359)
T ss_pred             HHHhcCCCcceEEeeccc--cccccc-----ceeEEehhHHh-hHHHHHHHcC--ccccHHHHHHHHHHHHHhcchhhcc
Confidence            445567777666666654  111111     12468999994 6888877444  5699999999999999999999999


Q ss_pred             CCeecCCCCCcEEEeecCCCCCEEEeecccceeccC---CCcccccccCCccccccccc--CCCCCCcchHHHHHHHHHH
Q 014171           86 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP---GKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYIL  160 (429)
Q Consensus        86 ~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~---~~~~~~~~g~~~y~aPE~~~--~~~~~~~DiwslG~il~~l  160 (429)
                      ||+||||||+|++++   .+..+|++|||+|+....   ....+..+-|.+|+|||++.  ..|+.+.||||+|||+.||
T Consensus       145 nViHRDLKPsNll~n---~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEm  221 (359)
T KOG0660|consen  145 NVIHRDLKPSNLLLN---ADCDLKICDFGLARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEM  221 (359)
T ss_pred             cccccccchhheeec---cCCCEEeccccceeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHH
Confidence            999999999999999   478899999999998864   33446678899999999985  4679999999999999999


Q ss_pred             hhCCCCCCCCChhHHHHHHHh-----------------------cCCCCCCCC----CCCCCHHHHHHHHHhccCCccCc
Q 014171          161 LCGRRPFWDKTEDGIFKEVLR-----------------------NKPDFRRKP----WPSISNSAKDFVKKLLVKDPRAR  213 (429)
Q Consensus       161 ~~g~~pf~~~~~~~~~~~i~~-----------------------~~~~~~~~~----~~~~~~~~~~li~~~l~~dp~~R  213 (429)
                      ++|++.|.|.+.-+.+..|+.                       ..+..++.+    ++..++.+.+|+.+||..||.+|
T Consensus       222 L~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kR  301 (359)
T KOG0660|consen  222 LTGKPLFPGKDYVHQLQLILELLGTPSEEDLQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKR  301 (359)
T ss_pred             HcCCCCCCCCchHHHHHHHHHhcCCCCHHHHHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCcccc
Confidence            999999988765444433322                       233333322    46788999999999999999999


Q ss_pred             CCHHHHhCCCccccCCCCCC
Q 014171          214 LTAAQALSHPWVREGGDASE  233 (429)
Q Consensus       214 ~s~~e~l~h~~~~~~~~~~~  233 (429)
                      +|++|+|+|||+...-....
T Consensus       302 ita~eAL~hPYl~~~hdp~d  321 (359)
T KOG0660|consen  302 ITAEEALAHPYLAPYHDPED  321 (359)
T ss_pred             CCHHHHhcChhhhhhcCCcc
Confidence            99999999999998655443

>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.5e-37  Score=290.04  Aligned_cols=209  Identities=27%  Similarity=0.442  Sum_probs=172.8

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH   85 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~   85 (429)
                      ++.+.|+|++.+..++..-          .....|||+|||+. +|.-++.. .+-.|++.++.++++|++.||+|||.+
T Consensus       170 Lr~l~HpNIikL~eivt~~----------~~~siYlVFeYMdh-DL~GLl~~-p~vkft~~qIKc~mkQLl~Gl~~cH~~  237 (560)
T KOG0600|consen  170 LRRLDHPNIIKLEEIVTSK----------LSGSIYLVFEYMDH-DLSGLLSS-PGVKFTEPQIKCYMKQLLEGLEYCHSR  237 (560)
T ss_pred             HHhcCCCcccceeeEEEec----------CCceEEEEEecccc-hhhhhhcC-CCcccChHHHHHHHHHHHHHHHHHhhc
Confidence            4577788888877776652          12234689999995 77776643 356799999999999999999999999


Q ss_pred             CCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCC--cccccccCCcccccccccC--CCCCCcchHHHHHHHHHHh
Q 014171           86 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILL  161 (429)
Q Consensus        86 ~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~--~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~  161 (429)
                      ||+|||||.+|||++   +.+.+||+|||+|+.+....  .....+-|.+|+|||++.|  .|+.++|+||+|||+.||+
T Consensus       238 gvlHRDIK~SNiLid---n~G~LKiaDFGLAr~y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~  314 (560)
T KOG0600|consen  238 GVLHRDIKGSNILID---NNGVLKIADFGLARFYTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELF  314 (560)
T ss_pred             CeeeccccccceEEc---CCCCEEeccccceeeccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHH
Confidence            999999999999999   68999999999999765443  4566788999999999976  5799999999999999999


Q ss_pred             hCCCCCCCCChhHHHHHHHhcCCCCCCCCCC-------------------------CCCHHHHHHHHHhccCCccCcCCH
Q 014171          162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP-------------------------SISNSAKDFVKKLLVKDPRARLTA  216 (429)
Q Consensus       162 ~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~-------------------------~~~~~~~~li~~~l~~dp~~R~s~  216 (429)
                      +|++.|.+.++-+.+.+|...........|+                         .++..+.+|+..||..||.+|.||
T Consensus       315 ~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA  394 (560)
T KOG0600|consen  315 LGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTA  394 (560)
T ss_pred             cCCCCcCCccHHHHHHHHHHHhCCCChhccccccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccH
Confidence            9999999999998888876543322222222                         356788999999999999999999


Q ss_pred             HHHhCCCccccCC
Q 014171          217 AQALSHPWVREGG  229 (429)
Q Consensus       217 ~e~l~h~~~~~~~  229 (429)
                      .++|+++||....
T Consensus       395 ~~aL~seyF~t~p  407 (560)
T KOG0600|consen  395 SSALQSEYFTTEP  407 (560)
T ss_pred             HHHhcCcccccCC
Confidence            9999999996543

>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]

Probab=100.00  E-value=1e-37  Score=283.07  Aligned_cols=219  Identities=25%  Similarity=0.408  Sum_probs=181.2

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHH
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECH   83 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~lH   83 (429)
                      +..+.|+|++++.-.+...... ...+..      +||||++ .+|.+++...  .+..++...++-+..||++||.|||
T Consensus        71 m~~l~HpNIV~L~~~f~~~~~~-d~~~ln------lVleymP-~tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh  142 (364)
T KOG0658|consen   71 MRKLDHPNIVRLLYFFSSSTES-DEVYLN------LVLEYMP-ETLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLH  142 (364)
T ss_pred             HHhcCCcCeeeEEEEEEecCCC-chhHHH------HHHHhch-HHHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHH
Confidence            4477888888888777764433 233333      6999998 6999988642  3467999999999999999999999


Q ss_pred             HCCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHh
Q 014171           84 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILL  161 (429)
Q Consensus        84 ~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~  161 (429)
                      +.||+||||||.|+|++.  .++.+||||||.|+.+..++...+...|+.|+|||.+-+  .|+.+.||||.||++.||+
T Consensus       143 ~~~IcHRDIKPqNlLvD~--~tg~LKicDFGSAK~L~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl  220 (364)
T KOG0658|consen  143 SHGICHRDIKPQNLLVDP--DTGVLKICDFGSAKVLVKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELL  220 (364)
T ss_pred             hcCcccCCCChheEEEcC--CCCeEEeccCCcceeeccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHh
Confidence            999999999999999996  689999999999999988888888899999999999864  6799999999999999999


Q ss_pred             hCCCCCCCCChhHHHHHHHhc------------CCC--------CCCCC-----CCCCCHHHHHHHHHhccCCccCcCCH
Q 014171          162 CGRRPFWDKTEDGIFKEVLRN------------KPD--------FRRKP-----WPSISNSAKDFVKKLLVKDPRARLTA  216 (429)
Q Consensus       162 ~g~~pf~~~~~~~~~~~i~~~------------~~~--------~~~~~-----~~~~~~~~~~li~~~l~~dp~~R~s~  216 (429)
                      -|++.|.|.+....+..|...            ++.        +....     ...++++..+|+.++|..+|.+|.++
T Consensus       221 ~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~  300 (364)
T KOG0658|consen  221 KGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSA  300 (364)
T ss_pred             cCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCH
Confidence            999999998887776655432            111        11111     23568999999999999999999999


Q ss_pred             HHHhCCCccccCCCCCCC
Q 014171          217 AQALSHPWVREGGDASEI  234 (429)
Q Consensus       217 ~e~l~h~~~~~~~~~~~~  234 (429)
                      .|++.||||.+...+...
T Consensus       301 ~~~l~h~fFdelr~~~~~  318 (364)
T KOG0658|consen  301 LEALAHPFFDELRDPNTK  318 (364)
T ss_pred             HHHhcchhhHHhhCcCcc
Confidence            999999999987766443

>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]

Probab=100.00  E-value=1.2e-37  Score=294.90  Aligned_cols=205  Identities=27%  Similarity=0.478  Sum_probs=173.9

Q ss_pred             cccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 014171            9 TRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV   88 (429)
Q Consensus         9 ~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~   88 (429)
                      .+....++|+|++..++......++.      +|+|||.| +|..++...  +.++|+.++.++.|++.||.|||+++|.
T Consensus        52 v~i~r~lkHpniv~m~esfEt~~~~~------vVte~a~g-~L~~il~~d--~~lpEe~v~~~a~~LVsaL~yLhs~ril  122 (808)
T KOG0597|consen   52 VRILRSLKHPNIVEMLESFETSAHLW------VVTEYAVG-DLFTILEQD--GKLPEEQVRAIAYDLVSALYYLHSNRIL  122 (808)
T ss_pred             HHHHHhcCCcchhhHHHhhcccceEE------EEehhhhh-hHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHhcCcc
Confidence            33334455555555544444444544      69999996 999999554  8999999999999999999999999999


Q ss_pred             ecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc-ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCC
Q 014171           89 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRP  166 (429)
Q Consensus        89 H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~p  166 (429)
                      |||+||.|||++   .++++|+||||+|+.+..+.. ...+.|||.|||||+..+ +|+..+|+||+||++||+++|++|
T Consensus       123 hrd~kPqniLl~---~~~~~KlcdFg~Ar~m~~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PP  199 (808)
T KOG0597|consen  123 HRDMKPQNILLE---KGGTLKLCDFGLARAMSTNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPP  199 (808)
T ss_pred             cccCCcceeeec---CCCceeechhhhhhhcccCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCC
Confidence            999999999999   689999999999998875543 456789999999999975 579999999999999999999999


Q ss_pred             CCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          167 FWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       167 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      |...+-....+.|.......+    +..+..+..|++.+|..||.+|.|+.+++.|||.+...
T Consensus       200 F~a~si~~Lv~~I~~d~v~~p----~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~HpF~k~~~  258 (808)
T KOG0597|consen  200 FYARSITQLVKSILKDPVKPP----STASSSFVNFLQGLLIKDPAQRLTWTDLLGHPFWKGKI  258 (808)
T ss_pred             chHHHHHHHHHHHhcCCCCCc----ccccHHHHHHHHHHhhcChhhcccHHHHhcChHHhhhh
Confidence            999888888888887765544    36899999999999999999999999999999998754

>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]

Probab=100.00  E-value=1.6e-36  Score=263.34  Aligned_cols=207  Identities=27%  Similarity=0.454  Sum_probs=168.1

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG   86 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~   86 (429)
                      ++++|+|++.++.++-      +...+.      +|+||++ .+|...+.. +...++...++.++.+++.||+|||++.
T Consensus        56 qel~h~nIi~LiD~F~------~~~~l~------lVfEfm~-tdLe~vIkd-~~i~l~pa~iK~y~~m~LkGl~y~H~~~  121 (318)
T KOG0659|consen   56 QELKHPNIIELIDVFP------HKSNLS------LVFEFMP-TDLEVVIKD-KNIILSPADIKSYMLMTLKGLAYCHSKW  121 (318)
T ss_pred             HHccCcchhhhhhhcc------CCCceE------EEEEecc-ccHHHHhcc-cccccCHHHHHHHHHHHHHHHHHHHhhh
Confidence            3455555555544443      333444      6899998 578776644 4578999999999999999999999999


Q ss_pred             CeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcc-cccccCCccccccccc--CCCCCCcchHHHHHHHHHHhhC
Q 014171           87 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCG  163 (429)
Q Consensus        87 i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~-~~~~g~~~y~aPE~~~--~~~~~~~DiwslG~il~~l~~g  163 (429)
                      |+||||||.|+|++   .++.+||+|||+|+.+...... ...+-|.+|+|||.+-  ..|+..+|+||+||++.||+.|
T Consensus       122 IlHRDlKPnNLLis---~~g~lKiADFGLAr~f~~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr  198 (318)
T KOG0659|consen  122 ILHRDLKPNNLLIS---SDGQLKIADFGLARFFGSPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLR  198 (318)
T ss_pred             hhcccCCccceEEc---CCCcEEeecccchhccCCCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHcc
Confidence            99999999999999   5899999999999987654433 3347799999999985  4679999999999999999999


Q ss_pred             CCCCCCCChhHHHHHHHhcCCCCCCCCCC------------------------CCCHHHHHHHHHhccCCccCcCCHHHH
Q 014171          164 RRPFWDKTEDGIFKEVLRNKPDFRRKPWP------------------------SISNSAKDFVKKLLVKDPRARLTAAQA  219 (429)
Q Consensus       164 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~------------------------~~~~~~~~li~~~l~~dp~~R~s~~e~  219 (429)
                      .+-|.|.++-+.+..|........+..||                        ..+.++.+|+.+||..||.+|+|+.|+
T Consensus       199 ~P~fpG~sDidQL~~If~~LGTP~~~~WP~~~~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qa  278 (318)
T KOG0659|consen  199 VPFFPGDSDIDQLSKIFRALGTPTPDQWPEMTSLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQA  278 (318)
T ss_pred             CCCCCCCchHHHHHHHHHHcCCCCcccCccccccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHH
Confidence            99999999999888887654433333343                        346778999999999999999999999


Q ss_pred             hCCCccccCCC
Q 014171          220 LSHPWVREGGD  230 (429)
Q Consensus       220 l~h~~~~~~~~  230 (429)
                      |+|+||+....
T Consensus       279 L~~~yf~~~P~  289 (318)
T KOG0659|consen  279 LKHPYFKSLPL  289 (318)
T ss_pred             hcchhhhcCCC
Confidence            99999997543

>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]

Probab=100.00  E-value=3.1e-36  Score=286.62  Aligned_cols=199  Identities=23%  Similarity=0.291  Sum_probs=165.2

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH   85 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~   85 (429)
                      +..++|||++.+++.+...      .     ...++||||+++|+|.+++.......++...+..++.||+.|+.|||++
T Consensus        93 l~~l~HpNIV~f~G~~~~~------~-----~~~~iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~  161 (362)
T KOG0192|consen   93 LSRLRHPNIVQFYGACTSP------P-----GSLCIVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSE  161 (362)
T ss_pred             HHhCCCCCeeeEEEEEcCC------C-----CceEEEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcC
Confidence            3447777777777765541      1     0345799999999999999875568899999999999999999999999


Q ss_pred             C-CeecCCCCCcEEEeecCCCC-CEEEeecccceeccCC-CcccccccCCcccccccccC---CCCCCcchHHHHHHHHH
Q 014171           86 G-LVHRDMKPENFLFKSAKEDS-SLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYI  159 (429)
Q Consensus        86 ~-i~H~dikp~Nil~~~~~~~~-~~kL~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~~~~---~~~~~~DiwslG~il~~  159 (429)
                      + ||||||||+|||++   ... ++||+|||+++..... .......||+.|||||++.+   .++.++||||||+++||
T Consensus       162 ~~iIHrDLK~~NiLv~---~~~~~~KI~DFGlsr~~~~~~~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWE  238 (362)
T KOG0192|consen  162 GPIIHRDLKSDNILVD---LKGKTLKIADFGLSREKVISKTSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWE  238 (362)
T ss_pred             CCeeecccChhhEEEc---CCCCEEEECCCccceeeccccccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHH
Confidence            9 99999999999999   465 9999999999877654 33344789999999999984   37999999999999999


Q ss_pred             HhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHh
Q 014171          160 LLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL  220 (429)
Q Consensus       160 l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l  220 (429)
                      |+||+.||.+.........+.........  ...+++.+..++.+||..||.+||++.+++
T Consensus       239 l~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~--p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~  297 (362)
T KOG0192|consen  239 LLTGEIPFEDLAPVQVASAVVVGGLRPPI--PKECPPHLSSLMERCWLVDPSRRPSFLEIV  297 (362)
T ss_pred             HHHCCCCCCCCCHHHHHHHHHhcCCCCCC--CccCCHHHHHHHHHhCCCCCCcCCCHHHHH
Confidence            99999999999886666666655433222  223889999999999999999999998876

>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=8.5e-37  Score=296.42  Aligned_cols=181  Identities=27%  Similarity=0.498  Sum_probs=164.2

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+||||+.||++...   ++.+.+++..++.|+..|+.||+|||++||||||||.+|||++   ..|++||+|||+++.
T Consensus       444 l~fvmey~~Ggdm~~~---~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD---~eGh~kiADFGlcKe  517 (694)
T KOG0694|consen  444 LFFVMEYVAGGDLMHH---IHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLD---TEGHVKIADFGLCKE  517 (694)
T ss_pred             EEEEEEecCCCcEEEE---EecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEc---ccCcEEecccccccc
Confidence            4579999999995432   3346899999999999999999999999999999999999999   589999999999986


Q ss_pred             cc-CCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCH
Q 014171          119 IK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN  196 (429)
Q Consensus       119 ~~-~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  196 (429)
                      .- .+....+.+|||.|+|||++.+ .|+.++|+|||||++|+|+.|.+||.+.++++....|....+.+|.    ++|.
T Consensus       518 ~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~d~~~yP~----~ls~  593 (694)
T KOG0694|consen  518 GMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVNDEVRYPR----FLSK  593 (694)
T ss_pred             cCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCCCCCC----cccH
Confidence            54 5566789999999999999985 6799999999999999999999999999999999999999988875    6899


Q ss_pred             HHHHHHHHhccCCccCcCC-----HHHHhCCCccccCC
Q 014171          197 SAKDFVKKLLVKDPRARLT-----AAQALSHPWVREGG  229 (429)
Q Consensus       197 ~~~~li~~~l~~dp~~R~s-----~~e~l~h~~~~~~~  229 (429)
                      ++.++++++|..+|.+|..     +.++.+||||+...
T Consensus       594 ea~~il~~ll~k~p~kRLG~~e~d~~~i~~hpFFr~i~  631 (694)
T KOG0694|consen  594 EAIAIMRRLLRKNPEKRLGSGERDAEDIKKHPFFRSID  631 (694)
T ss_pred             HHHHHHHHHhccCcccccCCCCCCchhhhhCCccccCC
Confidence            9999999999999999985     57899999999864

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=100.00  E-value=1.6e-36  Score=290.27  Aligned_cols=183  Identities=30%  Similarity=0.538  Sum_probs=158.8

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||.||+|.+++...  +.+++..+..++.||+.||+|||++||+||||||+||+++   .++.+||+|||++
T Consensus        68 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~---~~~~~kl~DfG~a  142 (323)
T cd05571          68 DRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLD---KDGHIKITDFGLC  142 (323)
T ss_pred             CEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEEC---CCCCEEEeeCCCC
Confidence            3457899999999999988654  6899999999999999999999999999999999999998   5788999999998


Q ss_pred             eecc-CCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DFIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~~~-~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      .... .........|++.|+|||++.+ .++.++||||+||++|+|++|+.||.+.+.......+......++    ..+
T Consensus       143 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~p----~~~  218 (323)
T cd05571         143 KEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP----RTL  218 (323)
T ss_pred             cccccCCCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCC
Confidence            7542 2233345679999999999865 468999999999999999999999998888777777776655443    357


Q ss_pred             CHHHHHHHHHhccCCccCcC-----CHHHHhCCCccccC
Q 014171          195 SNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG  228 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~-----s~~e~l~h~~~~~~  228 (429)
                      ++++++||.+||+.||.+||     ++.++++||||+..
T Consensus       219 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h~~f~~~  257 (323)
T cd05571         219 SPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEHRFFASI  257 (323)
T ss_pred             CHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence            99999999999999999999     89999999999875

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=100.00  E-value=4.5e-36  Score=282.07  Aligned_cols=189  Identities=27%  Similarity=0.429  Sum_probs=155.9

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..++|||||.+|+|...+.......+++..+..++.|++.||.|||++||+||||||+||+++   .++.++|+|||++.
T Consensus        74 ~~~lv~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~---~~~~~kl~Dfg~~~  150 (285)
T cd05631          74 ALCLVLTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLD---DRGHIRISDLGLAV  150 (285)
T ss_pred             eEEEEEEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEEC---CCCCEEEeeCCCcE
Confidence            357899999999999888665556799999999999999999999999999999999999998   57889999999998


Q ss_pred             eccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCH
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN  196 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  196 (429)
                      ............|++.|+|||++.+ .++.++||||+||++|+|++|+.||.+.........+..............++.
T Consensus       151 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~s~  230 (285)
T cd05631         151 QIPEGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKREEVDRRVKEDQEEYSEKFSE  230 (285)
T ss_pred             EcCCCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHHHHHHHhhcccccCCccCCH
Confidence            7655444456678999999999864 568899999999999999999999987655433332222221112223346899


Q ss_pred             HHHHHHHHhccCCccCcCC-----HHHHhCCCccccCC
Q 014171          197 SAKDFVKKLLVKDPRARLT-----AAQALSHPWVREGG  229 (429)
Q Consensus       197 ~~~~li~~~l~~dp~~R~s-----~~e~l~h~~~~~~~  229 (429)
                      ++.+||.+||+.||.+||+     ++++++||||+...
T Consensus       231 ~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h~~~~~~~  268 (285)
T cd05631         231 DAKSICRMLLTKNPKERLGCRGNGAAGVKQHPIFKNIN  268 (285)
T ss_pred             HHHHHHHHHhhcCHHHhcCCCCCCHHHHhcCHhhcCCC
Confidence            9999999999999999997     89999999998753

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=100.00  E-value=6.1e-36  Score=286.87  Aligned_cols=180  Identities=29%  Similarity=0.544  Sum_probs=157.4

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++.+.  +.+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++.
T Consensus        92 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~---~~~~~kl~Dfg~~~  166 (329)
T PTZ00263         92 RVYFLLEFVVGGELFTHLRKA--GRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLD---NKGHVKVTDFGFAK  166 (329)
T ss_pred             EEEEEEcCCCCChHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEC---CCCCEEEeeccCce
Confidence            356899999999999999654  6899999999999999999999999999999999999998   57899999999998


Q ss_pred             eccCCCcccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCH
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN  196 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  196 (429)
                      ......  ....|++.|+|||++.+. ++.++||||+||++|+|++|..||.+.+.......+..+...++    ..++.
T Consensus       167 ~~~~~~--~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~p----~~~~~  240 (329)
T PTZ00263        167 KVPDRT--FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILAGRLKFP----NWFDG  240 (329)
T ss_pred             EcCCCc--ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhcCCcCCC----CCCCH
Confidence            764332  345789999999998754 58899999999999999999999998888888888877655443    34789


Q ss_pred             HHHHHHHHhccCCccCcCC-----HHHHhCCCccccC
Q 014171          197 SAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG  228 (429)
Q Consensus       197 ~~~~li~~~l~~dp~~R~s-----~~e~l~h~~~~~~  228 (429)
                      .+++||.+||+.||.+|++     +++++.||||+..
T Consensus       241 ~~~~li~~~L~~dP~~R~~~~~~~~~~ll~hp~f~~~  277 (329)
T PTZ00263        241 RARDLVKGLLQTDHTKRLGTLKGGVADVKNHPYFHGA  277 (329)
T ss_pred             HHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCccCCC
Confidence            9999999999999999997     7999999999864

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=100.00  E-value=6.3e-36  Score=287.68  Aligned_cols=180  Identities=27%  Similarity=0.500  Sum_probs=158.2

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++.+.  +.+++..+..++.|++.||.|||++||+||||||+|||++   .++.+||+|||++.
T Consensus       105 ~~~lv~Ey~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~---~~~~ikL~DFG~a~  179 (340)
T PTZ00426        105 YLYLVLEFVIGGEFFTFLRRN--KRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLD---KDGFIKMTDFGFAK  179 (340)
T ss_pred             EEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEEC---CCCCEEEecCCCCe
Confidence            357899999999999999654  6799999999999999999999999999999999999998   57899999999998


Q ss_pred             eccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCH
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN  196 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  196 (429)
                      .....  .....||+.|+|||++.+ .++.++|+||+||++|+|++|..||.+.+.......+..+...++    +.+++
T Consensus       180 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p----~~~~~  253 (340)
T PTZ00426        180 VVDTR--TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPLLIYQKILEGIIYFP----KFLDN  253 (340)
T ss_pred             ecCCC--cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHHHHHHHHhcCCCCCC----CCCCH
Confidence            66432  245679999999999865 458899999999999999999999999888888888877765544    35789


Q ss_pred             HHHHHHHHhccCCccCcC-----CHHHHhCCCccccC
Q 014171          197 SAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG  228 (429)
Q Consensus       197 ~~~~li~~~l~~dp~~R~-----s~~e~l~h~~~~~~  228 (429)
                      .++++|.+||+.||.+|+     +++++++||||++.
T Consensus       254 ~~~~li~~~l~~dp~~R~~~~~~~~~~~~~hp~f~~~  290 (340)
T PTZ00426        254 NCKHLMKKLLSHDLTKRYGNLKKGAQNVKEHPWFGNI  290 (340)
T ss_pred             HHHHHHHHHcccCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence            999999999999999995     89999999999874

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=100.00  E-value=1.5e-35  Score=278.99  Aligned_cols=183  Identities=26%  Similarity=0.356  Sum_probs=154.2

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .++||||+. |+|.+++.......+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++..
T Consensus        84 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~---~~~~~kl~Dfg~~~~  159 (290)
T cd07862          84 LTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT---SSGQIKLADFGLARI  159 (290)
T ss_pred             EEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEc---CCCCEEEccccceEe
Confidence            468999997 6999998766556799999999999999999999999999999999999998   578999999999987


Q ss_pred             ccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCC---------
Q 014171          119 IKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR---------  188 (429)
Q Consensus       119 ~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~---------  188 (429)
                      ...........|++.|+|||.+.+ .++.++||||+||++|+|++|++||.+.+..+.+..+.........         
T Consensus       160 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  239 (290)
T cd07862         160 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL  239 (290)
T ss_pred             ccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhchhhhcc
Confidence            655544456678999999999854 5688999999999999999999999988877776666543211000         


Q ss_pred             --------------CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          189 --------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       189 --------------~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                                    ...+.++..+++++.+||+.||++|||+.++++||||
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~hp~f  290 (290)
T cd07862         240 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYF  290 (290)
T ss_pred             cchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhcCCCC
Confidence                          0124578889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]

Probab=100.00  E-value=1.5e-35  Score=269.27  Aligned_cols=216  Identities=26%  Similarity=0.405  Sum_probs=174.7

Q ss_pred             eeccccccc-ccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHH
Q 014171            5 LIGDTRSAN-CLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKD--SRYTEKDAAVVVRQMLRVAAE   81 (429)
Q Consensus         5 ~~~~~~~~n-~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~--~~l~~~~~~~i~~qil~aL~~   81 (429)
                      ++++++|+| ++.+..++.....+.....      -|+|+||+. -+|..++.....  ..++...++.++.||+.||.|
T Consensus        63 llk~L~~~~~iv~L~dv~~~~~~~~~~~~------l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~  135 (323)
T KOG0594|consen   63 LLKRLSHANHIVRLHDVIHTSNNHRGIGK------LYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAF  135 (323)
T ss_pred             HHHHhCCCcceEEEEeeeeecccccccce------EEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHH
Confidence            356677777 6666666655333222222      247999998 699999976543  468889999999999999999


Q ss_pred             HHHCCCeecCCCCCcEEEeecCCCCCEEEeecccceecc-CCCcccccccCCcccccccccC--CCCCCcchHHHHHHHH
Q 014171           82 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITY  158 (429)
Q Consensus        82 lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~-~~~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~  158 (429)
                      ||++||+||||||.||+++   ..+.+||+|||+|+... +.....+.++|.+|+|||++.+  .|+...||||+||+++
T Consensus       136 ~H~~~IlHRDLKPQNlLi~---~~G~lKlaDFGlAra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfa  212 (323)
T KOG0594|consen  136 LHSHGILHRDLKPQNLLIS---SSGVLKLADFGLARAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFA  212 (323)
T ss_pred             HHhCCeecccCCcceEEEC---CCCcEeeeccchHHHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHH
Confidence            9999999999999999999   58999999999999776 3444677889999999999975  4689999999999999


Q ss_pred             HHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCC--------------------------CCCHHHHHHHHHhccCCccC
Q 014171          159 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP--------------------------SISNSAKDFVKKLLVKDPRA  212 (429)
Q Consensus       159 ~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~--------------------------~~~~~~~~li~~~l~~dp~~  212 (429)
                      ||+++++.|.+.++.+.+..|..-........||                          ..+++..+++.+||+.+|.+
T Consensus       213 Em~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~  292 (323)
T KOG0594|consen  213 EMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAK  292 (323)
T ss_pred             HHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCccc
Confidence            9999999999999988888776543222222222                          23357899999999999999


Q ss_pred             cCCHHHHhCCCccccCCC
Q 014171          213 RLTAAQALSHPWVREGGD  230 (429)
Q Consensus       213 R~s~~e~l~h~~~~~~~~  230 (429)
                      |.|++.+|.||||.....
T Consensus       293 R~Sa~~al~h~yf~~~~~  310 (323)
T KOG0594|consen  293 RISAKGALTHPYFSELPE  310 (323)
T ss_pred             CcCHHHHhcChhhccccc
Confidence            999999999999998744

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.1e-36  Score=285.38  Aligned_cols=183  Identities=27%  Similarity=0.514  Sum_probs=158.0

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||+||+|.+++...  +.+++..+..++.||+.||.|||++||+||||||+||+++   .++.++|+|||++
T Consensus        66 ~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~---~~~~~kl~Dfg~~  140 (312)
T cd05585          66 EKLYLVLAFINGGELFHHLQRE--GRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLD---YQGHIALCDFGLC  140 (312)
T ss_pred             CeEEEEEcCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEEC---CCCcEEEEECccc
Confidence            3457899999999999998654  6799999999999999999999999999999999999998   5788999999998


Q ss_pred             eeccC-CCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DFIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~~~~-~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      ..... ........||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+.+.......+......++    ..+
T Consensus       141 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~~~~~~~----~~~  216 (312)
T cd05585         141 KLNMKDDDKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQEPLRFP----DGF  216 (312)
T ss_pred             ccCccCCCccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCCCC----CcC
Confidence            75432 223345679999999999875 468899999999999999999999998888888887776655443    357


Q ss_pred             CHHHHHHHHHhccCCccCcC---CHHHHhCCCccccC
Q 014171          195 SNSAKDFVKKLLVKDPRARL---TAAQALSHPWVREG  228 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~---s~~e~l~h~~~~~~  228 (429)
                      ++.++++|.+||+.||.+||   ++.++++||||+..
T Consensus       217 ~~~~~~li~~~L~~dp~~R~~~~~~~e~l~hp~~~~~  253 (312)
T cd05585         217 DRDAKDLLIGLLSRDPTRRLGYNGAQEIKNHPFFSQL  253 (312)
T ss_pred             CHHHHHHHHHHcCCCHHHcCCCCCHHHHHcCCCcCCC
Confidence            89999999999999999997   58999999999875

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=4.4e-36  Score=284.22  Aligned_cols=183  Identities=26%  Similarity=0.428  Sum_probs=167.7

Q ss_pred             eeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccceec
Q 014171           40 LRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI  119 (429)
Q Consensus        40 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~  119 (429)
                      ++||+||+||++.+.+.++++..++|+.+..++.|++.|+.|||+++|+|||||+.||+++   .++.|+|+|||+|+.+
T Consensus        80 ~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Niflt---k~~~VkLgDfGlaK~l  156 (426)
T KOG0589|consen   80 CIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLT---KDKKVKLGDFGLAKIL  156 (426)
T ss_pred             EEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhcc---ccCceeecchhhhhhc
Confidence            4799999999999999999888999999999999999999999999999999999999999   4777899999999998


Q ss_pred             cCCC-cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHH
Q 014171          120 KPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS  197 (429)
Q Consensus       120 ~~~~-~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  197 (429)
                      .... ...+.+||+.|++||++.+ +|+.++||||+||++|||++-+++|.+.+......++..+.....   ....+.+
T Consensus       157 ~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Pl---p~~ys~e  233 (426)
T KOG0589|consen  157 NPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPL---PSMYSSE  233 (426)
T ss_pred             CCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCC---CccccHH
Confidence            8765 6678899999999999985 679999999999999999999999999999999999998874322   2467999


Q ss_pred             HHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          198 AKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       198 ~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      ++.+|..||..+|..||++.++|.+|.....
T Consensus       234 l~~lv~~~l~~~P~~RPsa~~LL~~P~l~~~  264 (426)
T KOG0589|consen  234 LRSLVKSMLRKNPEHRPSALELLRRPHLLRY  264 (426)
T ss_pred             HHHHHHHHhhcCCccCCCHHHHhhChhhhhH
Confidence            9999999999999999999999999887743

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=9.8e-36  Score=280.60  Aligned_cols=179  Identities=31%  Similarity=0.579  Sum_probs=157.2

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|||||.||+|.+++.+.  +.+++..+..++.|++.||.|||++||+||||||+||+++   .++.+||+|||++..
T Consensus        76 ~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~---~~~~~kl~Dfg~~~~  150 (291)
T cd05612          76 LYMLMEYVPGGELFSYLRNS--GRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLD---KEGHIKLTDFGFAKK  150 (291)
T ss_pred             EEEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC---CCCCEEEEecCcchh
Confidence            46899999999999998654  6799999999999999999999999999999999999998   578899999999876


Q ss_pred             ccCCCcccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHH
Q 014171          119 IKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS  197 (429)
Q Consensus       119 ~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  197 (429)
                      ....  .....|++.|+|||++.+. ++.++||||+||++|+|++|+.||.+.+.......+..+...++.    .++..
T Consensus       151 ~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~----~~~~~  224 (291)
T cd05612         151 LRDR--TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILAGKLEFPR----HLDLY  224 (291)
T ss_pred             ccCC--cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcCCCc----cCCHH
Confidence            6432  2345789999999998754 588999999999999999999999998888888888877655443    46899


Q ss_pred             HHHHHHHhccCCccCcCC-----HHHHhCCCccccC
Q 014171          198 AKDFVKKLLVKDPRARLT-----AAQALSHPWVREG  228 (429)
Q Consensus       198 ~~~li~~~l~~dp~~R~s-----~~e~l~h~~~~~~  228 (429)
                      +++||.+||+.||.+|++     ++++++||||+..
T Consensus       225 ~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~  260 (291)
T cd05612         225 AKDLIKKLLVVDRTRRLGNMKNGADDVKNHRWFKSV  260 (291)
T ss_pred             HHHHHHHHcCCCHHHccCCccCCHHHHhcCccccCC
Confidence            999999999999999995     9999999999764

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=100.00  E-value=1.3e-35  Score=283.51  Aligned_cols=182  Identities=30%  Similarity=0.568  Sum_probs=158.0

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++.+.  ..+++..+..++.|++.||.|||++||+||||||+||+++   .++.+||+|||++.
T Consensus        70 ~~~iv~Ey~~~g~L~~~i~~~--~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~---~~~~~kL~DfG~~~  144 (320)
T cd05590          70 RLFFVMEFVNGGDLMFHIQKS--RRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLD---HEGHCKLADFGMCK  144 (320)
T ss_pred             EEEEEEcCCCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEEC---CCCcEEEeeCCCCe
Confidence            457899999999999988544  6799999999999999999999999999999999999998   57889999999987


Q ss_pred             ecc-CCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~-~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      ... .........|++.|+|||++.+ .++.++|+||+||++|+|++|+.||.+.+.......+......++    ..++
T Consensus       145 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~  220 (320)
T cd05590         145 EGIFNGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYP----TWLS  220 (320)
T ss_pred             ecCcCCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCCCCC----CCCC
Confidence            543 2223345678999999999875 458899999999999999999999999888888888876655433    3579


Q ss_pred             HHHHHHHHHhccCCccCcCCH------HHHhCCCccccC
Q 014171          196 NSAKDFVKKLLVKDPRARLTA------AQALSHPWVREG  228 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~------~e~l~h~~~~~~  228 (429)
                      .+++++|.+||+.||.+||++      +++++||||+..
T Consensus       221 ~~~~~li~~~L~~dP~~R~~~~~~~~~~~~~~h~~f~~~  259 (320)
T cd05590         221 QDAVDILKAFMTKNPTMRLGSLTLGGEEAILRHPFFKEL  259 (320)
T ss_pred             HHHHHHHHHHcccCHHHCCCCCCCCCHHHHHcCCCcCCC
Confidence            999999999999999999998      999999999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=100.00  E-value=2.2e-35  Score=287.28  Aligned_cols=185  Identities=28%  Similarity=0.477  Sum_probs=158.9

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||+||+|.+++..   ..+++..+..++.||+.||.|||++||+||||||+|||++   .++.+||+|||++.
T Consensus       117 ~~~lv~Ey~~gg~L~~~l~~---~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~---~~~~~kL~DfG~~~  190 (370)
T cd05596         117 YLYMVMEYMPGGDLVNLMSN---YDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD---KSGHLKLADFGTCM  190 (370)
T ss_pred             EEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEc---CCCCEEEEecccee
Confidence            35789999999999998844   3689999999999999999999999999999999999998   57899999999998


Q ss_pred             eccCCC--cccccccCCcccccccccC-----CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCC
Q 014171          118 FIKPGK--KFQDIVGSAYYVAPEVLKR-----KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP  190 (429)
Q Consensus       118 ~~~~~~--~~~~~~g~~~y~aPE~~~~-----~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  190 (429)
                      ......  ......||+.|+|||++.+     .++.++|+||+||++|+|++|+.||.+.+....+..+.........+.
T Consensus       191 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~  270 (370)
T cd05596         191 KMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMDHKNSLTFPD  270 (370)
T ss_pred             eccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHcCCCcCCCCC
Confidence            764332  2245679999999999853     257899999999999999999999999888888888877654444444


Q ss_pred             CCCCCHHHHHHHHHhccCCccC--cCCHHHHhCCCccccC
Q 014171          191 WPSISNSAKDFVKKLLVKDPRA--RLTAAQALSHPWVREG  228 (429)
Q Consensus       191 ~~~~~~~~~~li~~~l~~dp~~--R~s~~e~l~h~~~~~~  228 (429)
                      ...++.++++||.+||+.+|.+  |+|++++++||||+..
T Consensus       271 ~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h~~~~~~  310 (370)
T cd05596         271 DIEISKQAKDLICAFLTDREVRLGRNGVDEIKSHPFFKND  310 (370)
T ss_pred             cCCCCHHHHHHHHHHccChhhccCCCCHHHHhcCcccCCC
Confidence            4468999999999999999988  9999999999999874

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>PTZ00036 glycogen synthase kinase; Provisional

Probab=100.00  E-value=1.3e-35  Score=294.77  Aligned_cols=188  Identities=21%  Similarity=0.331  Sum_probs=152.1

Q ss_pred             eeEeeecCCCChHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           40 LRRIRLCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        40 ~lv~e~~~gg~L~~~l~~--~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ++|||||. |+|.+++..  ..+..+++..++.++.||+.||.|||++||+||||||+||+++.  .++.+||+|||+|+
T Consensus       143 ~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~--~~~~vkL~DFGla~  219 (440)
T PTZ00036        143 NVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDP--NTHTLKLCDFGSAK  219 (440)
T ss_pred             EEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcC--CCCceeeeccccch
Confidence            47999998 577777643  23467999999999999999999999999999999999999984  34579999999998


Q ss_pred             eccCCCcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCC-----------
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP-----------  184 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~-----------  184 (429)
                      ............||+.|+|||++.+  .++.++||||+||++|+|++|.+||.+.+..+.+..+.....           
T Consensus       220 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~~~  299 (440)
T PTZ00036        220 NLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKEMN  299 (440)
T ss_pred             hccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHhc
Confidence            7765555556688999999998754  468899999999999999999999998876665555433110           


Q ss_pred             ------CCCCC--------CCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          185 ------DFRRK--------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       185 ------~~~~~--------~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                            .++..        .....+.++++||.+||+.||.+|||+.++++||||+....
T Consensus       300 ~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~hp~f~~~~~  359 (440)
T PTZ00036        300 PNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALADPFFDDLRD  359 (440)
T ss_pred             hhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCChhHHhhhc
Confidence                  01110        11236789999999999999999999999999999987544

>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=9.4e-36  Score=254.99  Aligned_cols=183  Identities=32%  Similarity=0.607  Sum_probs=167.5

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      +.||++||...|+|...|...+...+++..+..++.|++.||.|||.++|+||||||+|+|++.   .+.+|++|||-+.
T Consensus        96 riyLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~---~~~lkiAdfGwsV  172 (281)
T KOG0580|consen   96 RIYLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGS---AGELKIADFGWSV  172 (281)
T ss_pred             eeEEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCC---CCCeeccCCCcee
Confidence            3457999999999999998778889999999999999999999999999999999999999994   7889999999987


Q ss_pred             eccCCCcccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCH
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN  196 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  196 (429)
                      ..+ .....+.+||.-|.+||...+. .+..+|+|++|++.|+++.|.+||...+..+++++|......++    +.++.
T Consensus       173 ~~p-~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~~~~~p----~~is~  247 (281)
T KOG0580|consen  173 HAP-SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKVDLKFP----STISG  247 (281)
T ss_pred             ecC-CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHccccCC----cccCh
Confidence            765 5556788999999999999764 58899999999999999999999999999999999998887776    46899


Q ss_pred             HHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          197 SAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       197 ~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      .++++|.+|+..+|.+|.+..+++.|||+...
T Consensus       248 ~a~dlI~~ll~~~p~~r~~l~~v~~hpwI~a~  279 (281)
T KOG0580|consen  248 GAADLISRLLVKNPIERLALTEVMDHPWIVAN  279 (281)
T ss_pred             hHHHHHHHHhccCccccccHHHHhhhHHHHhc
Confidence            99999999999999999999999999998653

>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-35  Score=262.38  Aligned_cols=196  Identities=37%  Similarity=0.628  Sum_probs=169.2

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      .+.|||||-+.||+|+..|.++  ..++|.++..+.++|+.||.+||.+||.||||||+|||....+.-.-+|||||.+.
T Consensus       149 ~~FYLVfEKm~GGplLshI~~~--~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLg  226 (463)
T KOG0607|consen  149 TRFYLVFEKMRGGPLLSHIQKR--KHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLG  226 (463)
T ss_pred             ceEEEEEecccCchHHHHHHHh--hhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccc
Confidence            4568999999999999999766  68999999999999999999999999999999999999997655667899999876


Q ss_pred             eeccCC--------CcccccccCCccccccccc------CCCCCCcchHHHHHHHHHHhhCCCCCCCCCh----------
Q 014171          117 DFIKPG--------KKFQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDKTE----------  172 (429)
Q Consensus       117 ~~~~~~--------~~~~~~~g~~~y~aPE~~~------~~~~~~~DiwslG~il~~l~~g~~pf~~~~~----------  172 (429)
                      ..+...        +...+.+|+..|||||+..      ..|..++|.||||||+|-|++|.+||.|.-.          
T Consensus       227 Sg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~  306 (463)
T KOG0607|consen  227 SGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEV  306 (463)
T ss_pred             cccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCc
Confidence            544322        2234568889999999873      3568899999999999999999999965432          


Q ss_pred             -----hHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCCCCC
Q 014171          173 -----DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI  234 (429)
Q Consensus       173 -----~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~~~~  234 (429)
                           ......|..+.++||...|..+|.+.+++|+.+|..|+.+|.++.++++|||++....+...
T Consensus       307 Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnhPw~~~~~~ekal  373 (463)
T KOG0607|consen  307 CRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNHPWVQRCAPEKAL  373 (463)
T ss_pred             cHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCCccccccchhccC
Confidence                 35677899999999999999999999999999999999999999999999999987655443

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=100.00  E-value=3.3e-35  Score=280.22  Aligned_cols=183  Identities=27%  Similarity=0.496  Sum_probs=156.6

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||.||+|..++...  +.+++..+..++.||+.||+|||++||+||||||+||+++   .++.++|+|||++
T Consensus        69 ~~~~lv~E~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~---~~~~~kl~Dfg~~  143 (316)
T cd05620          69 EHLFFVMEFLNGGDLMFHIQDK--GRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLD---RDGHIKIADFGMC  143 (316)
T ss_pred             CEEEEEECCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC---CCCCEEeCccCCC
Confidence            3457899999999999988554  6799999999999999999999999999999999999998   4788999999998


Q ss_pred             eeccC-CCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DFIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~~~~-~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      ..... ........|++.|+|||++.+ .++.++||||+||++|+|++|+.||.+.+.......+....+.++    ..+
T Consensus       144 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~----~~~  219 (316)
T cd05620         144 KENVFGDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIRVDTPHYP----RWI  219 (316)
T ss_pred             eecccCCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----CCC
Confidence            75322 223345678999999999875 468899999999999999999999998888877777766554443    357


Q ss_pred             CHHHHHHHHHhccCCccCcCCH-HHHhCCCccccC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTA-AQALSHPWVREG  228 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~-~e~l~h~~~~~~  228 (429)
                      +.+++++|.+||+.||.+|+++ +++++||||+..
T Consensus       220 ~~~~~~li~~~l~~dP~~R~~~~~~~~~h~~f~~~  254 (316)
T cd05620         220 TKESKDILEKLFERDPTRRLGVVGNIRGHPFFKTI  254 (316)
T ss_pred             CHHHHHHHHHHccCCHHHcCCChHHHHcCCCcCCC
Confidence            8999999999999999999997 588999999874

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=100.00  E-value=1.4e-35  Score=284.18  Aligned_cols=183  Identities=29%  Similarity=0.532  Sum_probs=156.9

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||+||+|..++...  ..+++.++..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++
T Consensus        68 ~~~~lv~Ey~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~---~~~~~kL~DfG~~  142 (328)
T cd05593          68 DRLCFVMEYVNGGELFFHLSRE--RVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLD---KDGHIKITDFGLC  142 (328)
T ss_pred             CEEEEEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEEC---CCCcEEEecCcCC
Confidence            3457899999999999888544  6799999999999999999999999999999999999998   5788999999998


Q ss_pred             eeccC-CCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DFIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~~~~-~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      ..... ........|++.|+|||++.+ .++.++||||+||++|+|++|+.||.+.+.......+......++    ..+
T Consensus       143 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~~~~~~~~p----~~~  218 (328)
T cd05593         143 KEGITDAATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEDIKFP----RTL  218 (328)
T ss_pred             ccCCCcccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHhccCCccCC----CCC
Confidence            75322 223345679999999999864 568899999999999999999999988887777776665554443    357


Q ss_pred             CHHHHHHHHHhccCCccCcC-----CHHHHhCCCccccC
Q 014171          195 SNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG  228 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~-----s~~e~l~h~~~~~~  228 (429)
                      +.++.++|.+||+.||.+|+     ++.++++||||...
T Consensus       219 ~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~  257 (328)
T cd05593         219 SADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRHSFFTGV  257 (328)
T ss_pred             CHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence            99999999999999999997     89999999999764

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=100.00  E-value=2.1e-35  Score=282.38  Aligned_cols=182  Identities=31%  Similarity=0.554  Sum_probs=157.3

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|..++...  +.+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++.
T Consensus        69 ~~~lv~E~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kL~Dfg~~~  143 (323)
T cd05595          69 RLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDFGLCK  143 (323)
T ss_pred             EEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEc---CCCCEEecccHHhc
Confidence            357899999999999888544  6799999999999999999999999999999999999998   57899999999987


Q ss_pred             eccC-CCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~~-~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      .... ........|++.|+|||++.+ .++.++|+||+||++|+|++|+.||.+.+.......+......++    ..++
T Consensus       144 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~~~~~~~p----~~~~  219 (323)
T cd05595         144 EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP----RTLS  219 (323)
T ss_pred             cccCCCCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCC----CCCC
Confidence            5322 223345678999999999864 568899999999999999999999998888877777776655443    3579


Q ss_pred             HHHHHHHHHhccCCccCcC-----CHHHHhCCCccccC
Q 014171          196 NSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG  228 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~-----s~~e~l~h~~~~~~  228 (429)
                      +.++++|.+||+.||.+|+     ++.++++|+||...
T Consensus       220 ~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h~~~~~~  257 (323)
T cd05595         220 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI  257 (323)
T ss_pred             HHHHHHHHHHccCCHHHhCCCCCCCHHHHHcCCCcCCC
Confidence            9999999999999999998     89999999999874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=3.5e-35  Score=282.17  Aligned_cols=184  Identities=30%  Similarity=0.478  Sum_probs=157.3

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||+||+|.+++...  +.+++..++.++.||+.||.|||++||+||||||+||+++   .++.+||+|||++.
T Consensus        75 ~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~kL~Dfg~a~  149 (333)
T cd05600          75 YLYLAMEYVPGGDFRTLLNNL--GVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLID---ASGHIKLTDFGLSK  149 (333)
T ss_pred             EEEEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC---CCCCEEEEeCcCCc
Confidence            457899999999999998544  6799999999999999999999999999999999999998   57899999999987


Q ss_pred             eccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCC----C
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW----P  192 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~----~  192 (429)
                      ....  ......|++.|+|||++.+ .++.++||||+||++|+|++|..||.+.+..+....+......+..+.+    .
T Consensus       150 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  227 (333)
T cd05600         150 GIVT--YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKETLQRPVYDDPRF  227 (333)
T ss_pred             cccc--ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccccccCCCCCcccc
Confidence            6543  3345678999999999865 4688999999999999999999999988887777766654333322222    2


Q ss_pred             CCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          193 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       193 ~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      .++.++.++|.+||..+|.+||+++++++||||+..
T Consensus       228 ~~s~~~~~li~~~l~~~~~rr~s~~~ll~h~~~~~~  263 (333)
T cd05600         228 NLSDEAWDLITKLINDPSRRFGSLEDIKNHPFFKEV  263 (333)
T ss_pred             ccCHHHHHHHHHHhhChhhhcCCHHHHHhCcccCCC
Confidence            568999999999999999999999999999999864

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=100.00  E-value=2.7e-35  Score=286.32  Aligned_cols=185  Identities=26%  Similarity=0.461  Sum_probs=153.6

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||+||+|.+++.+.  +.+++..++.++.|++.||.|||++||+||||||+|||++   .++.+||+|||++.
T Consensus        75 ~~~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~---~~~~vkL~DFGla~  149 (363)
T cd05628          75 NLYLIMEFLPGGDMMTLLMKK--DTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLD---SKGHVKLSDFGLCT  149 (363)
T ss_pred             eEEEEEcCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEEC---CCCCEEEeeccCcc
Confidence            357899999999999999654  6899999999999999999999999999999999999998   47899999999987


Q ss_pred             eccCCC------------------------------------cccccccCCcccccccccC-CCCCCcchHHHHHHHHHH
Q 014171          118 FIKPGK------------------------------------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYIL  160 (429)
Q Consensus       118 ~~~~~~------------------------------------~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l  160 (429)
                      ......                                    .....+||+.|+|||++.+ .++.++|+||+||++|+|
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~el  229 (363)
T cd05628         150 GLKKAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEM  229 (363)
T ss_pred             cccccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHH
Confidence            543211                                    0123579999999999864 468899999999999999


Q ss_pred             hhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCcc---CcCCHHHHhCCCccccC
Q 014171          161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPR---ARLTAAQALSHPWVREG  228 (429)
Q Consensus       161 ~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~---~R~s~~e~l~h~~~~~~  228 (429)
                      ++|+.||.+.+......++.........+....++++++++|.+|+. +|.   .||+++++++||||+..
T Consensus       230 l~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~hp~f~~~  299 (363)
T cd05628         230 LIGYPPFCSETPQETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTNPFFEGV  299 (363)
T ss_pred             HhCCCCCCCCCHHHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCCCCCCCC
Confidence            99999999988888888887644333333334578999999999875 454   45899999999999875

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=100.00  E-value=4.2e-35  Score=285.10  Aligned_cols=185  Identities=27%  Similarity=0.465  Sum_probs=156.3

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++..   ..+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||+|.
T Consensus       117 ~~~lv~Ey~~gg~L~~~l~~---~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~---~~~~~kL~DFG~a~  190 (370)
T cd05621         117 YLYMVMEYMPGGDLVNLMSN---YDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLD---KHGHLKLADFGTCM  190 (370)
T ss_pred             EEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEC---CCCCEEEEecccce
Confidence            35789999999999998843   3689999999999999999999999999999999999998   57899999999998


Q ss_pred             eccCCCc--ccccccCCcccccccccCC-----CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCC
Q 014171          118 FIKPGKK--FQDIVGSAYYVAPEVLKRK-----SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP  190 (429)
Q Consensus       118 ~~~~~~~--~~~~~g~~~y~aPE~~~~~-----~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  190 (429)
                      .......  .....||+.|+|||++.+.     ++.++|+||+||++|+|++|+.||.+.+.......+......+..+.
T Consensus       191 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~  270 (370)
T cd05621         191 KMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLNFPE  270 (370)
T ss_pred             ecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHhCCcccCCCC
Confidence            7643322  2456799999999998642     57899999999999999999999999888888888876554444333


Q ss_pred             CCCCCHHHHHHHHHhccCCccC--cCCHHHHhCCCccccC
Q 014171          191 WPSISNSAKDFVKKLLVKDPRA--RLTAAQALSHPWVREG  228 (429)
Q Consensus       191 ~~~~~~~~~~li~~~l~~dp~~--R~s~~e~l~h~~~~~~  228 (429)
                      ...++..+++++.+||..++.+  |++++++++||||+..
T Consensus       271 ~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~hp~~~~~  310 (370)
T cd05621         271 DVEISKHAKNLICAFLTDREVRLGRNGVEEIKQHPFFKND  310 (370)
T ss_pred             cccCCHHHHHHHHHHccCchhccCCCCHHHHhcCcccCCC
Confidence            3457999999999999865544  8899999999999874

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=100.00  E-value=4.3e-35  Score=280.11  Aligned_cols=183  Identities=27%  Similarity=0.504  Sum_probs=158.7

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||+||+|..++...  ..+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++
T Consensus        69 ~~~~lv~E~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~---~~~~~kL~Dfg~~  143 (321)
T cd05591          69 DRLFFVMEYVNGGDLMFQIQRS--RKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLD---AEGHCKLADFGMC  143 (321)
T ss_pred             CeEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---CCCCEEEeecccc
Confidence            3457899999999999988544  6799999999999999999999999999999999999998   5789999999998


Q ss_pred             eeccC-CCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DFIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~~~~-~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      ..... ........|++.|+|||++.+ .++.++|+||+||++|+|++|+.||.+.+.......+......++    ..+
T Consensus       144 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~~~~~~p----~~~  219 (321)
T cd05591         144 KEGILNGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILHDDVLYP----VWL  219 (321)
T ss_pred             eecccCCccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCC
Confidence            75432 223345678999999999865 568899999999999999999999999988888888877665443    357


Q ss_pred             CHHHHHHHHHhccCCccCcC-------CHHHHhCCCccccC
Q 014171          195 SNSAKDFVKKLLVKDPRARL-------TAAQALSHPWVREG  228 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~-------s~~e~l~h~~~~~~  228 (429)
                      +.++.++|.+||+.||.+|+       +++++++||||+..
T Consensus       220 ~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~hp~~~~~  260 (321)
T cd05591         220 SKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQHPFFKEI  260 (321)
T ss_pred             CHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcCCccCCC
Confidence            89999999999999999999       99999999999764

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=6.1e-35  Score=279.27  Aligned_cols=182  Identities=31%  Similarity=0.563  Sum_probs=157.2

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++.+.  +.+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++.
T Consensus        74 ~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~~~  148 (323)
T cd05584          74 KLYLILEYLSGGELFMHLERE--GIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLD---AQGHVKLTDFGLCK  148 (323)
T ss_pred             eEEEEEeCCCCchHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCCEEEeeCcCCe
Confidence            357899999999999988554  6789999999999999999999999999999999999998   57899999999987


Q ss_pred             eccC-CCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~~-~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      .... ........|++.|+|||++.+ .++.++||||+||++|+|++|+.||.+.........+..+...++    +.++
T Consensus       149 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~~~~~~----~~~~  224 (323)
T cd05584         149 ESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKGKLNLP----PYLT  224 (323)
T ss_pred             ecccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCC
Confidence            5432 222344578999999999865 458899999999999999999999998888877777777654433    4578


Q ss_pred             HHHHHHHHHhccCCccCcC-----CHHHHhCCCccccC
Q 014171          196 NSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG  228 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~-----s~~e~l~h~~~~~~  228 (429)
                      +.++++|.+||+.+|.+||     +++++++||||+..
T Consensus       225 ~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h~~~~~~  262 (323)
T cd05584         225 PEARDLLKKLLKRNPSSRLGAGPGDAAEVQSHPFFRHV  262 (323)
T ss_pred             HHHHHHHHHHcccCHhHcCCCCCCCHHHHhcCCCcCCC
Confidence            9999999999999999999     89999999999864

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=100.00  E-value=3e-35  Score=281.41  Aligned_cols=183  Identities=27%  Similarity=0.458  Sum_probs=157.3

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||.||+|..++.+.  +.+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++
T Consensus        69 ~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~---~~~~~kl~Dfg~~  143 (323)
T cd05575          69 DKLYFVLDYVNGGELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLD---SQGHVVLTDFGLC  143 (323)
T ss_pred             CEEEEEEcCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEEC---CCCcEEEeccCCC
Confidence            3457899999999999988544  6899999999999999999999999999999999999998   5789999999998


Q ss_pred             eeccC-CCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DFIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~~~~-~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      ..... ........|++.|+|||++.+ .++.++||||+||++|+|++|+.||.+.+.......+.......+    +.+
T Consensus       144 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~----~~~  219 (323)
T cd05575         144 KEGIEHSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILNKPLRLK----PNI  219 (323)
T ss_pred             cccccCCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCC
Confidence            75422 223345578999999999865 458899999999999999999999998888888877776654433    457


Q ss_pred             CHHHHHHHHHhccCCccCcCCH----HHHhCCCccccC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTA----AQALSHPWVREG  228 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~----~e~l~h~~~~~~  228 (429)
                      +..+.++|.+||+.||.+||++    .++++||||+..
T Consensus       220 ~~~~~~li~~~l~~~p~~R~~~~~~~~~il~~~~~~~~  257 (323)
T cd05575         220 SVSARHLLEGLLQKDRTKRLGAKDDFLEIKNHVFFSSI  257 (323)
T ss_pred             CHHHHHHHHHHhhcCHHhCCCCCCCHHHHHcCCCcCCC
Confidence            9999999999999999999987    699999999764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.9e-35  Score=284.68  Aligned_cols=186  Identities=27%  Similarity=0.502  Sum_probs=156.7

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||.||+|.+++.+.  +.+++..++.++.||+.||.|||++||+||||||+||+++   .++.++|+|||++
T Consensus        74 ~~~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~---~~~~~kl~Dfg~~  148 (364)
T cd05599          74 NYLYLIMEYLPGGDMMTLLMKK--DTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLD---AKGHIKLSDFGLC  148 (364)
T ss_pred             CeEEEEECCCCCcHHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC---CCCCEEEeecccc
Confidence            3457899999999999998654  6799999999999999999999999999999999999998   5789999999998


Q ss_pred             eeccCCC---------------------------------------cccccccCCcccccccccC-CCCCCcchHHHHHH
Q 014171          117 DFIKPGK---------------------------------------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVI  156 (429)
Q Consensus       117 ~~~~~~~---------------------------------------~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~i  156 (429)
                      ..+....                                       .....+||+.|+|||++.+ .++.++||||+||+
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~i  228 (364)
T cd05599         149 TGLKKSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVI  228 (364)
T ss_pred             eeccccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhH
Confidence            7543211                                       0112468999999999864 56899999999999


Q ss_pred             HHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCC---HHHHhCCCccccC
Q 014171          157 TYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT---AAQALSHPWVREG  228 (429)
Q Consensus       157 l~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s---~~e~l~h~~~~~~  228 (429)
                      +|+|++|..||.+.+.......+......+..+....+++.++++|.+|+. +|.+|++   +.++++||||+..
T Consensus       229 l~el~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h~~~~~~  302 (364)
T cd05599         229 MYEMLVGYPPFCSDNPQETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSHPFFKGV  302 (364)
T ss_pred             HHHhhcCCCCCCCCCHHHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcCCCcCCC
Confidence            999999999999888887777777655444333334578999999999997 8999998   9999999999875

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=100.00  E-value=8.5e-35  Score=277.37  Aligned_cols=182  Identities=32%  Similarity=0.554  Sum_probs=156.4

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|..++...  +.+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++.
T Consensus        70 ~~~lv~e~~~gg~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~---~~~~~kL~Dfg~a~  144 (316)
T cd05592          70 HLFFVMEYLNGGDLMFHIQSS--GRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLD---KDGHIKIADFGMCK  144 (316)
T ss_pred             EEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEEC---CCCCEEEccCcCCe
Confidence            357899999999999988554  5799999999999999999999999999999999999998   57899999999997


Q ss_pred             eccC-CCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~~-~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      .... .......+||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+.+.......+....+.++    ..++
T Consensus       145 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~  220 (316)
T cd05592         145 ENMNGEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILNDRPHFP----RWIS  220 (316)
T ss_pred             ECCCCCCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----CCCC
Confidence            6432 223345678999999999875 458899999999999999999999999888887777766544333    3578


Q ss_pred             HHHHHHHHHhccCCccCcCCH-HHHhCCCccccC
Q 014171          196 NSAKDFVKKLLVKDPRARLTA-AQALSHPWVREG  228 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~-~e~l~h~~~~~~  228 (429)
                      .++.++|.+||+.||.+||++ .++++||||+..
T Consensus       221 ~~~~~ll~~~l~~~P~~R~~~~~~l~~h~~~~~~  254 (316)
T cd05592         221 KEAKDCLSKLFERDPTKRLGVDGDIRQHPFFRGI  254 (316)
T ss_pred             HHHHHHHHHHccCCHHHcCCChHHHHcCcccCCC
Confidence            999999999999999999986 588899999864

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=100.00  E-value=1.2e-34  Score=277.49  Aligned_cols=181  Identities=25%  Similarity=0.460  Sum_probs=156.5

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||+||+|...+..   +.+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++.
T Consensus        76 ~~~lv~E~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~---~~~~~kL~Dfg~~~  149 (324)
T cd05589          76 HVCFVMEYAAGGDLMMHIHT---DVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLD---TEGFVKIADFGLCK  149 (324)
T ss_pred             EEEEEEcCCCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEEC---CCCcEEeCcccCCc
Confidence            45789999999999887733   5799999999999999999999999999999999999998   57899999999987


Q ss_pred             eccC-CCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~~-~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      .... ........|++.|+|||.+.+ .++.++|+||+||++|+|++|+.||.+.+.......+......++    ..++
T Consensus       150 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~p----~~~~  225 (324)
T cd05589         150 EGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVNDEVRYP----RFLS  225 (324)
T ss_pred             cCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----CCCC
Confidence            5432 223345678999999999875 458899999999999999999999999888888887777665443    3579


Q ss_pred             HHHHHHHHHhccCCccCcC-----CHHHHhCCCccccC
Q 014171          196 NSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG  228 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~-----s~~e~l~h~~~~~~  228 (429)
                      ..+.++|.+||+.||.+||     ++.++++||||+..
T Consensus       226 ~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~~~~f~~~  263 (324)
T cd05589         226 REAISIMRRLLRRNPERRLGSGEKDAEDVKKQPFFRDI  263 (324)
T ss_pred             HHHHHHHHHHhhcCHhHcCCCCCCCHHHHhhCCCcCCC
Confidence            9999999999999999999     69999999999874

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=100.00  E-value=2e-35  Score=282.92  Aligned_cols=183  Identities=30%  Similarity=0.540  Sum_probs=157.2

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~-~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      ...|+|||||.||+|..++...  ..+++..+..++.||+.||.|||+ +||+||||||+||+++   .++.+||+|||+
T Consensus        68 ~~~~lv~E~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~---~~~~~kL~Dfg~  142 (325)
T cd05594          68 DRLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD---KDGHIKITDFGL  142 (325)
T ss_pred             CEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEEC---CCCCEEEecCCC
Confidence            3457899999999999888544  579999999999999999999997 7999999999999998   578999999999


Q ss_pred             ceecc-CCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          116 SDFIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       116 a~~~~-~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      +.... .........|++.|+|||++.+ .++.++||||+||++|+|++|+.||.+.+.......+......++    ..
T Consensus       143 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~~~~~~~p----~~  218 (325)
T cd05594         143 CKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP----RT  218 (325)
T ss_pred             CeecCCCCcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCHHHHHHHHhcCCCCCC----CC
Confidence            87543 2223345579999999999864 568899999999999999999999998888777777766655443    35


Q ss_pred             CCHHHHHHHHHhccCCccCcC-----CHHHHhCCCccccC
Q 014171          194 ISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG  228 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~-----s~~e~l~h~~~~~~  228 (429)
                      +++++.++|.+||+.||.+|+     ++.++++||||+..
T Consensus       219 ~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h~~~~~~  258 (325)
T cd05594         219 LSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQHKFFAGI  258 (325)
T ss_pred             CCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcCCCcCCC
Confidence            789999999999999999997     89999999999874

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=100.00  E-value=1e-34  Score=277.19  Aligned_cols=182  Identities=30%  Similarity=0.540  Sum_probs=157.0

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|..++.+.  +.+++..+..++.||+.||.|||++||+||||||+||+++   .++.++|+|||++.
T Consensus        70 ~~~lv~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~---~~~~~kl~Dfg~~~  144 (318)
T cd05570          70 RLFFVMEYVNGGDLMFHIQRS--GRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLD---SEGHIKIADFGMCK  144 (318)
T ss_pred             EEEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEEC---CCCcEEecccCCCe
Confidence            357899999999999888544  6799999999999999999999999999999999999998   57899999999987


Q ss_pred             eccC-CCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~~-~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      .... .......+|++.|+|||++.+ .++.++|+||+||++|+|++|+.||.+.+.......+......++    ..++
T Consensus       145 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~~~~~~~~----~~~~  220 (318)
T cd05570         145 EGILGGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSILEDEVRYP----RWLS  220 (318)
T ss_pred             ecCcCCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC----CcCC
Confidence            5322 222344578999999999875 468899999999999999999999998888777777776655443    3578


Q ss_pred             HHHHHHHHHhccCCccCcCCH-----HHHhCCCccccC
Q 014171          196 NSAKDFVKKLLVKDPRARLTA-----AQALSHPWVREG  228 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~-----~e~l~h~~~~~~  228 (429)
                      ..+.+||.+||+.||.+||++     .++++||||+..
T Consensus       221 ~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~~~~~~~~  258 (318)
T cd05570         221 KEAKSILKSFLTKNPEKRLGCLPTGEQDIKGHPFFREI  258 (318)
T ss_pred             HHHHHHHHHHccCCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence            999999999999999999999     999999999874

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=100.00  E-value=1e-34  Score=284.23  Aligned_cols=185  Identities=29%  Similarity=0.490  Sum_probs=155.1

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||+||+|.+++.+.  +.+++..++.++.||+.||+|||++||+||||||+|||++   .++.+||+|||++.
T Consensus        75 ~~~lv~E~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~---~~g~~kL~DFGla~  149 (382)
T cd05625          75 NLYFVMDYIPGGDMMSLLIRM--GIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILID---RDGHIKLTDFGLCT  149 (382)
T ss_pred             EEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCCEEEeECCCCc
Confidence            357899999999999998654  6799999999999999999999999999999999999998   57899999999875


Q ss_pred             eccCC------------------------------------------------CcccccccCCcccccccccC-CCCCCc
Q 014171          118 FIKPG------------------------------------------------KKFQDIVGSAYYVAPEVLKR-KSGPES  148 (429)
Q Consensus       118 ~~~~~------------------------------------------------~~~~~~~g~~~y~aPE~~~~-~~~~~~  148 (429)
                      .....                                                ......+||+.|+|||++.+ .++.++
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~  229 (382)
T cd05625         150 GFRWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLC  229 (382)
T ss_pred             cccccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCee
Confidence            32100                                                00123468999999999864 568999


Q ss_pred             chHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCC---HHHHhCCCcc
Q 014171          149 DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT---AAQALSHPWV  225 (429)
Q Consensus       149 DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s---~~e~l~h~~~  225 (429)
                      ||||+||++|+|++|++||.+.+.......+.........+....+++++.++|.+|+ .+|.+|++   ++++++||||
T Consensus       230 DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f  308 (382)
T cd05625         230 DWWSVGVILYEMLVGQPPFLAQTPLETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGADEIKAHPFF  308 (382)
T ss_pred             eEEechHHHHHHHhCCCCCCCCCHHHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCHHHHhcCCCc
Confidence            9999999999999999999988887777777765544444445678999999999986 59999997   9999999999


Q ss_pred             ccC
Q 014171          226 REG  228 (429)
Q Consensus       226 ~~~  228 (429)
                      +..
T Consensus       309 ~~~  311 (382)
T cd05625         309 KTI  311 (382)
T ss_pred             CCc
Confidence            875

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=100.00  E-value=2e-34  Score=274.75  Aligned_cols=183  Identities=28%  Similarity=0.495  Sum_probs=156.6

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||+||+|.+++.+.  ..+++.++..++.|++.||.|||++||+||||||+||+++   .++.+||+|||++.
T Consensus        70 ~~~lv~ey~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~---~~~~~kl~Dfg~~~  144 (316)
T cd05619          70 NLFFVMEYLNGGDLMFHIQSC--HKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLD---TDGHIKIADFGMCK  144 (316)
T ss_pred             EEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEEC---CCCCEEEccCCcce
Confidence            357899999999999988554  5799999999999999999999999999999999999998   47889999999987


Q ss_pred             eccC-CCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~~-~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      .... ........||+.|+|||++.+ .++.++|+||+||++|+|++|+.||.+.+..+....+....+.++    ..++
T Consensus       145 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~~~~~~~~----~~~~  220 (316)
T cd05619         145 ENMLGDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIRMDNPCYP----RWLT  220 (316)
T ss_pred             ECCCCCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----ccCC
Confidence            5432 223345678999999999865 468899999999999999999999998888777777765554333    3578


Q ss_pred             HHHHHHHHHhccCCccCcCCHH-HHhCCCccccCC
Q 014171          196 NSAKDFVKKLLVKDPRARLTAA-QALSHPWVREGG  229 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~~-e~l~h~~~~~~~  229 (429)
                      .+++++|.+||+.||.+||++. ++++||||+...
T Consensus       221 ~~~~~li~~~l~~~P~~R~~~~~~l~~h~~~~~~~  255 (316)
T cd05619         221 REAKDILVKLFVREPERRLGVKGDIRQHPFFREID  255 (316)
T ss_pred             HHHHHHHHHHhccCHhhcCCChHHHHcCcccCCCC
Confidence            9999999999999999999996 899999998753

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.6e-34  Score=271.59  Aligned_cols=188  Identities=28%  Similarity=0.465  Sum_probs=155.5

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++   +++.++|+|||++.
T Consensus        74 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~~l~Dfg~~~  150 (285)
T cd05605          74 ALCLVLTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLD---DYGHIRISDLGLAV  150 (285)
T ss_pred             eEEEEEeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEEC---CCCCEEEeeCCCce
Confidence            457899999999999888665556799999999999999999999999999999999999998   57889999999998


Q ss_pred             eccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCH
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN  196 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  196 (429)
                      ............|++.|+|||++.+ .++.++|+||+||++|+|++|+.||.+.........+............+.++.
T Consensus       151 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (285)
T cd05605         151 EIPEGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKREEVERRVKEDQEEYSEKFSE  230 (285)
T ss_pred             ecCCCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhHHHHHHHHhhhcccccCcccCH
Confidence            7654444445678999999999864 458889999999999999999999987765444333322222222222345889


Q ss_pred             HHHHHHHHhccCCccCcC-----CHHHHhCCCccccC
Q 014171          197 SAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG  228 (429)
Q Consensus       197 ~~~~li~~~l~~dp~~R~-----s~~e~l~h~~~~~~  228 (429)
                      .+++||.+||+.||.+||     +++++++||||+..
T Consensus       231 ~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~  267 (285)
T cd05605         231 AARSICRQLLTKDPGFRLGCRGEGAEEVKAHPFFRTA  267 (285)
T ss_pred             HHHHHHHHHccCCHHHhcCCCCCCHHHHhcCcCccCC
Confidence            999999999999999999     99999999999874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=100.00  E-value=1.4e-34  Score=278.56  Aligned_cols=186  Identities=30%  Similarity=0.430  Sum_probs=147.9

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|||||. ++|.+++...  ..+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++..
T Consensus        79 ~~lv~e~~~-~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~---~~~~~kL~Dfg~~~~  152 (338)
T cd07859          79 IYVVFELME-SDLHQVIKAN--DDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILAN---ADCKLKICDFGLARV  152 (338)
T ss_pred             EEEEEecCC-CCHHHHHHhc--ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCcEEEccCccccc
Confidence            468999995 7899888544  5799999999999999999999999999999999999998   578999999999875


Q ss_pred             ccCCC----cccccccCCcccccccccC---CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHh----------
Q 014171          119 IKPGK----KFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR----------  181 (429)
Q Consensus       119 ~~~~~----~~~~~~g~~~y~aPE~~~~---~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~----------  181 (429)
                      .....    ......|++.|+|||++.+   .++.++||||+||++|+|++|++||.+.+.......+..          
T Consensus       153 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~  232 (338)
T cd07859         153 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPETI  232 (338)
T ss_pred             cccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHHHH
Confidence            43221    1234578999999998753   568899999999999999999999977654332221110          


Q ss_pred             -----------------cCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          182 -----------------NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       182 -----------------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                                       ..+......++.+++.+.++|.+||+.||.+|||++++++||||+....
T Consensus       233 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~hp~f~~~~~  298 (338)
T cd07859         233 SRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALADPYFKGLAK  298 (338)
T ss_pred             HHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcCchhhhcCc
Confidence                             0000011123457888999999999999999999999999999987654

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=100.00  E-value=1.6e-34  Score=282.58  Aligned_cols=188  Identities=28%  Similarity=0.433  Sum_probs=152.8

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||+||+|.+++.+.  +.+++..++.++.||+.||.|||++||+||||||+||+++   ..+++||+|||++
T Consensus        74 ~~~~lv~E~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~---~~~~~kL~DFGl~  148 (381)
T cd05626          74 DNLYFVMDYIPGGDMMSLLIRM--EVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILID---LDGHIKLTDFGLC  148 (381)
T ss_pred             CEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEEC---CCCCEEEeeCcCC
Confidence            3457899999999999998654  6799999999999999999999999999999999999998   5789999999987


Q ss_pred             eeccCCC------------------------------------------------cccccccCCcccccccccC-CCCCC
Q 014171          117 DFIKPGK------------------------------------------------KFQDIVGSAYYVAPEVLKR-KSGPE  147 (429)
Q Consensus       117 ~~~~~~~------------------------------------------------~~~~~~g~~~y~aPE~~~~-~~~~~  147 (429)
                      .......                                                .....+||+.|+|||++.+ .++.+
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~  228 (381)
T cd05626         149 TGFRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQL  228 (381)
T ss_pred             cccccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCc
Confidence            5321000                                                0123479999999999864 46889


Q ss_pred             cchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccC--CccCcCCHHHHhCCCcc
Q 014171          148 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVK--DPRARLTAAQALSHPWV  225 (429)
Q Consensus       148 ~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~--dp~~R~s~~e~l~h~~~  225 (429)
                      +||||+||++|+|++|..||...+.......+.........+....+++++++||.+|+..  ++..|++++++++||||
T Consensus       229 ~DiwSlG~il~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~hp~f  308 (381)
T cd05626         229 CDWWSVGVILFEMLVGQPPFLAPTPTETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKAHPFF  308 (381)
T ss_pred             cceeehhhHHHHHHhCCCCCcCCCHHHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCccc
Confidence            9999999999999999999988887776666665443333344456899999999996654  45559999999999999


Q ss_pred             ccCC
Q 014171          226 REGG  229 (429)
Q Consensus       226 ~~~~  229 (429)
                      +...
T Consensus       309 ~~~~  312 (381)
T cd05626         309 SEVD  312 (381)
T ss_pred             CCCC
Confidence            8753

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=100.00  E-value=1.6e-34  Score=281.17  Aligned_cols=185  Identities=26%  Similarity=0.458  Sum_probs=156.6

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++..   ..+++..+..++.||+.||+|||++||+||||||+||+++   .++.+||+|||++.
T Consensus       117 ~~~lv~Ey~~gg~L~~~~~~---~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~---~~~~ikL~DfG~a~  190 (371)
T cd05622         117 YLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD---KSGHLKLADFGTCM  190 (371)
T ss_pred             EEEEEEcCCCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEC---CCCCEEEEeCCcee
Confidence            35789999999999998854   3689999999999999999999999999999999999998   57899999999998


Q ss_pred             eccCCC--cccccccCCcccccccccCC-----CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCC
Q 014171          118 FIKPGK--KFQDIVGSAYYVAPEVLKRK-----SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP  190 (429)
Q Consensus       118 ~~~~~~--~~~~~~g~~~y~aPE~~~~~-----~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  190 (429)
                      ......  ......||+.|+|||++.+.     ++.++||||+||++|+|++|..||.+.+.......+......+..+.
T Consensus       191 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~  270 (371)
T cd05622         191 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPD  270 (371)
T ss_pred             EcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCcccCCC
Confidence            765332  22356799999999998632     57899999999999999999999999888888888877654444444


Q ss_pred             CCCCCHHHHHHHHHhccCCccC--cCCHHHHhCCCccccC
Q 014171          191 WPSISNSAKDFVKKLLVKDPRA--RLTAAQALSHPWVREG  228 (429)
Q Consensus       191 ~~~~~~~~~~li~~~l~~dp~~--R~s~~e~l~h~~~~~~  228 (429)
                      .+.++..++++|.+||..++.+  |++++++++|+||+..
T Consensus       271 ~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~~~~~~  310 (371)
T cd05622         271 DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKND  310 (371)
T ss_pred             cCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCcccCCC
Confidence            5678999999999999844433  7899999999999874

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.4e-35  Score=280.57  Aligned_cols=184  Identities=28%  Similarity=0.522  Sum_probs=158.7

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||.||+|..++.+.  +.+++..+..++.||+.||.|||++||+||||||+||+++   .++.++|+|||++
T Consensus        69 ~~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~---~~~~~kl~Dfg~a  143 (330)
T cd05586          69 SDLYLVTDYMSGGELFWHLQKE--GRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLD---ATGHIALCDFGLS  143 (330)
T ss_pred             CeEEEEEcCCCCChHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC---CCCCEEEecCCcC
Confidence            4467899999999999988543  6899999999999999999999999999999999999998   5788999999998


Q ss_pred             eeccC-CCcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          117 DFIKP-GKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       117 ~~~~~-~~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      ..... ........||+.|+|||++.+  .++.++||||+||++|+|++|+.||.+.........+..+...++.   ..
T Consensus       144 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~---~~  220 (330)
T cd05586         144 KANLTDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIAFGKVRFPK---NV  220 (330)
T ss_pred             cCCCCCCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHHcCCCCCCC---cc
Confidence            75422 233345679999999999864  3588999999999999999999999998888888887776655543   24


Q ss_pred             CCHHHHHHHHHhccCCccCcC----CHHHHhCCCccccC
Q 014171          194 ISNSAKDFVKKLLVKDPRARL----TAAQALSHPWVREG  228 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~----s~~e~l~h~~~~~~  228 (429)
                      ++++++++|.+||+.||.+||    ++.++++||||+..
T Consensus       221 ~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~h~~~~~~  259 (330)
T cd05586         221 LSDEGRQFVKGLLNRNPQHRLGAHRDAVELKEHPFFADI  259 (330)
T ss_pred             CCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhcCccccCC
Confidence            789999999999999999998    79999999999864

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.6e-35  Score=282.71  Aligned_cols=185  Identities=32%  Similarity=0.597  Sum_probs=158.5

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++.+.  +.+++..++.++.||+.||.|||++||+||||||+||+++   .++.+||+|||++.
T Consensus        75 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~---~~~~~kL~Dfg~~~  149 (350)
T cd05573          75 HLYLVMEYMPGGDLMNLLIRK--DVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILID---ADGHIKLADFGLCK  149 (350)
T ss_pred             eEEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---CCCCEEeecCCCCc
Confidence            357899999999999999655  6899999999999999999999999999999999999998   57899999999987


Q ss_pred             eccCCC------------------------------cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCC
Q 014171          118 FIKPGK------------------------------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRP  166 (429)
Q Consensus       118 ~~~~~~------------------------------~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~p  166 (429)
                      ......                              ......||+.|+|||++.+ .++.++||||+||++|+|++|+.|
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~P  229 (350)
T cd05573         150 KMNKAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPP  229 (350)
T ss_pred             cCcccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCC
Confidence            654432                              2234578999999999875 468899999999999999999999


Q ss_pred             CCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCC-HHHHhCCCccccC
Q 014171          167 FWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT-AAQALSHPWVREG  228 (429)
Q Consensus       167 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s-~~e~l~h~~~~~~  228 (429)
                      |.+.........+.........+....++++++++|.+||. ||.+|++ ++++++||||+..
T Consensus       230 f~~~~~~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~hp~~~~~  291 (350)
T cd05573         230 FYSDTLQETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSHPFFKGI  291 (350)
T ss_pred             CCCCCHHHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcCCCcCCC
Confidence            99888777777777633333333344579999999999997 9999999 9999999999864

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=100.00  E-value=9.5e-35  Score=273.46  Aligned_cols=182  Identities=24%  Similarity=0.413  Sum_probs=147.7

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|||||. |+|.+++... +..+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++..
T Consensus        78 ~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~---~~~~~kl~DfG~~~~  152 (288)
T cd07871          78 LTLVFEYLD-SDLKQYLDNC-GNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLIN---EKGELKLADFGLARA  152 (288)
T ss_pred             EEEEEeCCC-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC---CCCCEEECcCcceee
Confidence            468999998 5898887544 35689999999999999999999999999999999999998   578899999999876


Q ss_pred             ccCCC-cccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCC-------
Q 014171          119 IKPGK-KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR-------  188 (429)
Q Consensus       119 ~~~~~-~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~-------  188 (429)
                      ..... ......+++.|+|||++.+  .++.++|+||+||++|+|++|++||.+.+..+....+.......+.       
T Consensus       153 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (288)
T cd07871         153 KSVPTKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGIT  232 (288)
T ss_pred             ccCCCccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccc
Confidence            54322 2344578999999998854  4588999999999999999999999887766655544332111000       


Q ss_pred             -------------------CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          189 -------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       189 -------------------~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                                         ...+.++.++++||.+||+.||.+|||++++++||||
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~hp~f  288 (288)
T cd07871         233 SNEEFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALRHSYF  288 (288)
T ss_pred             cchhhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhcCCCC
Confidence                               0123467899999999999999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=100.00  E-value=9.6e-35  Score=279.06  Aligned_cols=182  Identities=29%  Similarity=0.518  Sum_probs=150.4

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++...  ..+++..+..++.||+.||.|||++||+||||||+|||++   .++.+||+|||++.
T Consensus        79 ~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~---~~~~~kl~DfG~~~  153 (332)
T cd05614          79 KLHLILDYVSGGEMFTHLYQR--DNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLD---SEGHVVLTDFGLSK  153 (332)
T ss_pred             EEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEEC---CCCCEEEeeCcCCc
Confidence            357899999999999998654  6799999999999999999999999999999999999998   47899999999987


Q ss_pred             eccCCC--cccccccCCcccccccccCC--CCCCcchHHHHHHHHHHhhCCCCCCCCCh----hHHHHHHHhcCCCCCCC
Q 014171          118 FIKPGK--KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFKEVLRNKPDFRRK  189 (429)
Q Consensus       118 ~~~~~~--~~~~~~g~~~y~aPE~~~~~--~~~~~DiwslG~il~~l~~g~~pf~~~~~----~~~~~~i~~~~~~~~~~  189 (429)
                      ......  ......||+.|+|||++.+.  ++.++||||+||++|+|++|+.||.....    ......+....+.    
T Consensus       154 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~----  229 (332)
T cd05614         154 EFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQSEVSRRILKCDPP----  229 (332)
T ss_pred             cccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHHHHHHHHhcCCCC----
Confidence            653322  22345789999999998753  57899999999999999999999964332    2233334433332    


Q ss_pred             CCCCCCHHHHHHHHHhccCCccCcC-----CHHHHhCCCccccC
Q 014171          190 PWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG  228 (429)
Q Consensus       190 ~~~~~~~~~~~li~~~l~~dp~~R~-----s~~e~l~h~~~~~~  228 (429)
                      ..+.++..++++|.+||+.||.+||     +++++++||||+..
T Consensus       230 ~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h~~~~~~  273 (332)
T cd05614         230 FPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEHPFFKGL  273 (332)
T ss_pred             CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcCCCcCCC
Confidence            2345799999999999999999999     88999999999874

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=100.00  E-value=1.6e-34  Score=277.06  Aligned_cols=183  Identities=29%  Similarity=0.503  Sum_probs=150.3

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||+||+|..++.+.  +.+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++
T Consensus        69 ~~~~lv~e~~~~g~L~~~~~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~---~~~~~kL~Dfg~~  143 (329)
T cd05588          69 SRLFFVIEFVSGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLD---AEGHIKLTDYGMC  143 (329)
T ss_pred             CEEEEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC---CCCCEEECcCccc
Confidence            3457899999999999888544  6899999999999999999999999999999999999998   5788999999998


Q ss_pred             eec-cCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCC---------hhHHHHHHHhcCCC
Q 014171          117 DFI-KPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKT---------EDGIFKEVLRNKPD  185 (429)
Q Consensus       117 ~~~-~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~---------~~~~~~~i~~~~~~  185 (429)
                      ... .........+||+.|+|||++.+ .++.++|+||+||++|+|++|+.||....         .......+......
T Consensus       144 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (329)
T cd05588         144 KEGIRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIR  223 (329)
T ss_pred             cccccCCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCC
Confidence            753 22333455689999999999875 45889999999999999999999995321         11233334444333


Q ss_pred             CCCCCCCCCCHHHHHHHHHhccCCccCcCC------HHHHhCCCccccC
Q 014171          186 FRRKPWPSISNSAKDFVKKLLVKDPRARLT------AAQALSHPWVREG  228 (429)
Q Consensus       186 ~~~~~~~~~~~~~~~li~~~l~~dp~~R~s------~~e~l~h~~~~~~  228 (429)
                      ++    ..++..+.++|.+||+.||.+|++      ++++++||||+..
T Consensus       224 ~p----~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~hp~~~~~  268 (329)
T cd05588         224 IP----RSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKSHPFFRNI  268 (329)
T ss_pred             CC----CCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence            32    357899999999999999999987      7899999999764

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=100.00  E-value=7.7e-35  Score=284.51  Aligned_cols=186  Identities=27%  Similarity=0.444  Sum_probs=154.7

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||+||+|.+++.+.  +.+++..++.++.||+.||.|||++||+||||||+||+++   .++.+||+|||+|
T Consensus        74 ~~~~lv~E~~~~g~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~---~~~~ikL~DFG~a  148 (376)
T cd05598          74 DNLYFVMDYIPGGDMMSLLIRL--GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILID---RDGHIKLTDFGLC  148 (376)
T ss_pred             CEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEEC---CCCCEEEEeCCCC
Confidence            3457899999999999999554  6799999999999999999999999999999999999998   5789999999987


Q ss_pred             eeccCC--------------------------------------------CcccccccCCcccccccccC-CCCCCcchH
Q 014171          117 DFIKPG--------------------------------------------KKFQDIVGSAYYVAPEVLKR-KSGPESDVW  151 (429)
Q Consensus       117 ~~~~~~--------------------------------------------~~~~~~~g~~~y~aPE~~~~-~~~~~~Diw  151 (429)
                      ..+...                                            ......+||+.|+|||++.+ .++.++|||
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw  228 (376)
T cd05598         149 TGFRWTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWW  228 (376)
T ss_pred             ccccccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeee
Confidence            432100                                            00113478999999999865 458899999


Q ss_pred             HHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcC---CHHHHhCCCccccC
Q 014171          152 SIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL---TAAQALSHPWVREG  228 (429)
Q Consensus       152 slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~---s~~e~l~h~~~~~~  228 (429)
                      |+||++|+|++|+.||.+....+....+.........+....++.++.++|.+|+ .+|.+|+   ++.++++||||+..
T Consensus       229 SlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~ell~h~~~~~~  307 (376)
T cd05598         229 SVGVILYEMLVGQPPFLADTPAETQLKVINWETTLHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEIKAHPFFKGI  307 (376)
T ss_pred             eccceeeehhhCCCCCCCCCHHHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHHhCCCCcCCC
Confidence            9999999999999999988877777766655444444444568999999999977 5999999   99999999999864

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=100.00  E-value=3.2e-34  Score=269.71  Aligned_cols=183  Identities=25%  Similarity=0.391  Sum_probs=151.4

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .++|+||+. ++|.+++.......+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++..
T Consensus        82 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~---~~~~~kl~dfg~~~~  157 (288)
T cd07863          82 VTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVT---SGGQVKLADFGLARI  157 (288)
T ss_pred             EEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCCEEECccCcccc
Confidence            468999998 5898888765556699999999999999999999999999999999999998   578899999999987


Q ss_pred             ccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCC------------
Q 014171          119 IKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD------------  185 (429)
Q Consensus       119 ~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~------------  185 (429)
                      ...........|++.|+|||++.+ .++.++||||+||++|+|++|++||.+.........+......            
T Consensus       158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (288)
T cd07863         158 YSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVTL  237 (288)
T ss_pred             ccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCcccccc
Confidence            654444455678999999998864 5688999999999999999999999887776655554431100            


Q ss_pred             ----CC-------CCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          186 ----FR-------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       186 ----~~-------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                          +.       ....+.++..++++|.+||+.||.+|||+.+++.||||
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~hp~f  288 (288)
T cd07863         238 PRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQHPFF  288 (288)
T ss_pred             cccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence                00       01124567889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.3e-36  Score=276.04  Aligned_cols=184  Identities=27%  Similarity=0.458  Sum_probs=156.9

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...+++||||.||++.+.+  ..+..+++..+..++++++.||.|||.++.+|||||+.||++.   ..+.+||+|||.+
T Consensus        84 ~~LwiiMey~~gGsv~~lL--~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s---~~g~vkl~DfgVa  158 (467)
T KOG0201|consen   84 TKLWIIMEYCGGGSVLDLL--KSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLS---ESGDVKLADFGVA  158 (467)
T ss_pred             ccHHHHHHHhcCcchhhhh--ccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEe---ccCcEEEEeccee
Confidence            4456899999999999988  4445669999999999999999999999999999999999999   4689999999999


Q ss_pred             eeccCCCc-ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DFIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~~~~~~~-~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      ..+..... ..+.+|||.|||||++.+ .|+.++||||||++.+||++|.+|+....+...+..|-...   ++..-...
T Consensus       159 ~ql~~~~~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvlflIpk~~---PP~L~~~~  235 (467)
T KOG0201|consen  159 GQLTNTVKRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVLFLIPKSA---PPRLDGDF  235 (467)
T ss_pred             eeeechhhccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEEEeccCCC---CCcccccc
Confidence            88875543 378899999999999986 68999999999999999999999998777643333333332   22222367


Q ss_pred             CHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      ++.+++||..||+.||+.||+|.++|+|+|++..
T Consensus       236 S~~~kEFV~~CL~k~P~~RpsA~~LLKh~FIk~a  269 (467)
T KOG0201|consen  236 SPPFKEFVEACLDKNPEFRPSAKELLKHKFIKRA  269 (467)
T ss_pred             CHHHHHHHHHHhhcCcccCcCHHHHhhhHHHHhc
Confidence            8999999999999999999999999999999984

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=100.00  E-value=4.8e-35  Score=280.94  Aligned_cols=186  Identities=28%  Similarity=0.490  Sum_probs=157.9

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||+||+|.+++.+. ...+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++.
T Consensus        75 ~~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~---~~~~~kL~Dfg~a~  150 (330)
T cd05601          75 NLYLVMEYQPGGDLLSLLNRY-EDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLID---RTGHIKLADFGSAA  150 (330)
T ss_pred             eEEEEECCCCCCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEEC---CCCCEEeccCCCCe
Confidence            357899999999999988654 35799999999999999999999999999999999999998   57899999999998


Q ss_pred             eccCCCcc--cccccCCccccccccc-------CCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCC
Q 014171          118 FIKPGKKF--QDIVGSAYYVAPEVLK-------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR  188 (429)
Q Consensus       118 ~~~~~~~~--~~~~g~~~y~aPE~~~-------~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~  188 (429)
                      ........  ....|++.|+|||++.       ..++.++||||+||++|+|++|+.||...+....+..+.........
T Consensus       151 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~  230 (330)
T cd05601         151 RLTANKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMNFQRFLKF  230 (330)
T ss_pred             ECCCCCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHcCCCccCC
Confidence            76543322  2346899999999985       23478899999999999999999999988887777777665433333


Q ss_pred             CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          189 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       189 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      +..+.++.++++||.+||. +|.+|||++++++||||+..
T Consensus       231 ~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h~~~~~~  269 (330)
T cd05601         231 PEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCHPFFSKI  269 (330)
T ss_pred             CCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCCCCcCCC
Confidence            3345689999999999998 99999999999999999864

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=100.00  E-value=6.7e-35  Score=278.46  Aligned_cols=183  Identities=29%  Similarity=0.499  Sum_probs=157.9

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||.||+|.+++.+.  ..+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++
T Consensus        71 ~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kL~Dfg~~  145 (318)
T cd05582          71 GKLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD---EEGHIKLTDFGLS  145 (318)
T ss_pred             CEEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEEC---CCCcEEEeeccCC
Confidence            3457899999999999998544  6799999999999999999999999999999999999998   5788999999998


Q ss_pred             eeccCC-CcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DFIKPG-KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~~~~~-~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      ...... .......|++.|+|||.+.+ .++.++||||+||++|+|++|+.||.+.+.......+......++    ..+
T Consensus       146 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~~~~~~p----~~~  221 (318)
T cd05582         146 KESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILKAKLGMP----QFL  221 (318)
T ss_pred             cccCCCCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHcCCCCCC----CCC
Confidence            765433 23345678999999999875 458899999999999999999999998888777777776655443    357


Q ss_pred             CHHHHHHHHHhccCCccCcCC-----HHHHhCCCccccC
Q 014171          195 SNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG  228 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s-----~~e~l~h~~~~~~  228 (429)
                      ++.++++|.+||+.||.+||+     +.+++.||||+..
T Consensus       222 ~~~~~~li~~~l~~~P~~R~~a~~~~~~~~~~~~~~~~~  260 (318)
T cd05582         222 SPEAQSLLRALFKRNPANRLGAGPDGVEEIKRHPFFSTI  260 (318)
T ss_pred             CHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhCCCCcCCC
Confidence            899999999999999999999     7889999999864

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.9e-34  Score=281.86  Aligned_cols=186  Identities=25%  Similarity=0.455  Sum_probs=152.6

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||.||+|.+++...  +.+++..++.++.|++.||+|||++||+||||||+||+++   .++.+||+|||++
T Consensus        74 ~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~---~~~~~kl~DfGla  148 (377)
T cd05629          74 QYLYLIMEFLPGGDLMTMLIKY--DTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILID---RGGHIKLSDFGLS  148 (377)
T ss_pred             CeeEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEC---CCCCEEEeecccc
Confidence            3457899999999999998654  6799999999999999999999999999999999999998   5789999999998


Q ss_pred             eeccCCC------------------------------------------------cccccccCCcccccccccC-CCCCC
Q 014171          117 DFIKPGK------------------------------------------------KFQDIVGSAYYVAPEVLKR-KSGPE  147 (429)
Q Consensus       117 ~~~~~~~------------------------------------------------~~~~~~g~~~y~aPE~~~~-~~~~~  147 (429)
                      +......                                                .....+||+.|+|||++.+ .++.+
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~  228 (377)
T cd05629         149 TGFHKQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQE  228 (377)
T ss_pred             cccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCc
Confidence            6321100                                                0012468999999999864 46899


Q ss_pred             cchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCc---CCHHHHhCCCc
Q 014171          148 SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRAR---LTAAQALSHPW  224 (429)
Q Consensus       148 ~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R---~s~~e~l~h~~  224 (429)
                      +||||+||++|+|++|.+||.+.+.......+......+..+....++.++++||.+||. +|.+|   +++.++++|||
T Consensus       229 ~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~hp~  307 (377)
T cd05629         229 CDWWSLGAIMFECLIGWPPFCSENSHETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSHPF  307 (377)
T ss_pred             eeeEecchhhhhhhcCCCCCCCCCHHHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcCCC
Confidence            999999999999999999998888777777776544333333334578999999999998 67765   59999999999


Q ss_pred             cccC
Q 014171          225 VREG  228 (429)
Q Consensus       225 ~~~~  228 (429)
                      |+..
T Consensus       308 ~~~~  311 (377)
T cd05629         308 FRGV  311 (377)
T ss_pred             cCCC
Confidence            9864

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=100.00  E-value=1.2e-34  Score=277.47  Aligned_cols=183  Identities=26%  Similarity=0.446  Sum_probs=156.6

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||.||+|..++.+.  +.+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++
T Consensus        69 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~---~~~~~kL~DfG~~  143 (325)
T cd05604          69 EKLYFVLDFVNGGELFFHLQRE--RSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLD---SQGHVVLTDFGLC  143 (325)
T ss_pred             CEEEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC---CCCCEEEeecCCc
Confidence            3457899999999999888543  6899999999999999999999999999999999999998   5789999999998


Q ss_pred             eeccC-CCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DFIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~~~~-~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      ..... ........|++.|+|||++.+ .++.++||||+||++|+|++|..||.+.+.......+......+.    +..
T Consensus       144 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~~~~~~~----~~~  219 (325)
T cd05604         144 KEGIAQSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILHKPLVLR----PGA  219 (325)
T ss_pred             ccCCCCCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHcCCccCC----CCC
Confidence            75322 223345678999999999875 458899999999999999999999998888888777776554333    357


Q ss_pred             CHHHHHHHHHhccCCccCcCCH----HHHhCCCccccC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTA----AQALSHPWVREG  228 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~----~e~l~h~~~~~~  228 (429)
                      +..+.++|.+||+.+|.+||++    .++++||||+..
T Consensus       220 ~~~~~~ll~~ll~~~p~~R~~~~~~~~~i~~h~~f~~~  257 (325)
T cd05604         220 SLTAWSILEELLEKDRQRRLGAKEDFLEIQEHPFFESL  257 (325)
T ss_pred             CHHHHHHHHHHhccCHHhcCCCCCCHHHHhcCCCcCCC
Confidence            8999999999999999999976    599999999864

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=100.00  E-value=3.4e-34  Score=274.26  Aligned_cols=184  Identities=27%  Similarity=0.472  Sum_probs=158.6

Q ss_pred             cccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           36 PLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        36 ~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      ....|+|||||+||+|.+++...  +.+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||+
T Consensus        73 ~~~~~lv~E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~---~~~~~kL~Dfg~  147 (324)
T cd05587          73 MDRLYFVMEYVNGGDLMYHIQQV--GKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD---AEGHIKIADFGM  147 (324)
T ss_pred             CCEEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEc---CCCCEEEeecCc
Confidence            34468999999999999988544  6799999999999999999999999999999999999998   578899999999


Q ss_pred             ceecc-CCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          116 SDFIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       116 a~~~~-~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      +.... .........|++.|+|||++.+ .++.++|+||+||++|+|++|+.||.+.+.......+......++    ..
T Consensus       148 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~~----~~  223 (324)
T cd05587         148 CKENIFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP----KS  223 (324)
T ss_pred             ceecCCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCC----CC
Confidence            87532 2223345678999999999875 458899999999999999999999999888888888877665443    35


Q ss_pred             CCHHHHHHHHHhccCCccCcCCH-----HHHhCCCccccC
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTA-----AQALSHPWVREG  228 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~-----~e~l~h~~~~~~  228 (429)
                      ++..+.+++.+||..||.+|+++     +++++||||+..
T Consensus       224 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~hp~~~~~  263 (324)
T cd05587         224 LSKEAVSICKGLLTKHPAKRLGCGPTGERDIREHAFFRRI  263 (324)
T ss_pred             CCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCCCcCCC
Confidence            79999999999999999999976     899999999874

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=100.00  E-value=2.5e-34  Score=275.63  Aligned_cols=183  Identities=30%  Similarity=0.508  Sum_probs=149.8

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||+||+|..++...  +.+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++
T Consensus        69 ~~~~lv~E~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~---~~~~~kL~DfG~~  143 (329)
T cd05618          69 SRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD---SEGHIKLTDYGMC  143 (329)
T ss_pred             CEEEEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEC---CCCCEEEeeCCcc
Confidence            4457899999999999888544  6799999999999999999999999999999999999998   5789999999998


Q ss_pred             eecc-CCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCC---------ChhHHHHHHHhcCCC
Q 014171          117 DFIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDK---------TEDGIFKEVLRNKPD  185 (429)
Q Consensus       117 ~~~~-~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~---------~~~~~~~~i~~~~~~  185 (429)
                      .... .........||+.|+|||++.+ .++.++|+||+||++|+|++|+.||...         ........+......
T Consensus       144 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~  223 (329)
T cd05618         144 KEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIR  223 (329)
T ss_pred             ccccCCCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCC
Confidence            7532 2223345678999999999875 4588999999999999999999999521         111233334444433


Q ss_pred             CCCCCCCCCCHHHHHHHHHhccCCccCcCC------HHHHhCCCccccC
Q 014171          186 FRRKPWPSISNSAKDFVKKLLVKDPRARLT------AAQALSHPWVREG  228 (429)
Q Consensus       186 ~~~~~~~~~~~~~~~li~~~l~~dp~~R~s------~~e~l~h~~~~~~  228 (429)
                      ++    ..++..+.++|.+||+.||.+||+      +.++++||||+..
T Consensus       224 ~p----~~~~~~~~~ll~~~L~~dP~~R~~~~~~~~~~~i~~hp~f~~~  268 (329)
T cd05618         224 IP----RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV  268 (329)
T ss_pred             CC----CCCCHHHHHHHHHHhcCCHHHcCCCCCCCCHHHHhcCCCCCCC
Confidence            33    457899999999999999999998      5799999999764

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=100.00  E-value=1.7e-34  Score=276.53  Aligned_cols=183  Identities=27%  Similarity=0.446  Sum_probs=156.4

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||.||+|.+++...  +.+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++
T Consensus        69 ~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~---~~~~~kl~DfG~a  143 (325)
T cd05602          69 DKLYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLD---SQGHIVLTDFGLC  143 (325)
T ss_pred             CeEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEC---CCCCEEEccCCCC
Confidence            3457899999999999988554  6789999999999999999999999999999999999998   4788999999998


Q ss_pred             eecc-CCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DFIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~~~-~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      .... .........|++.|+|||++.+ .++.++||||+||++|+|++|..||.+.+....+..+......+    .+.+
T Consensus       144 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~----~~~~  219 (325)
T cd05602         144 KENIEHNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQL----KPNI  219 (325)
T ss_pred             cccccCCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHhCCcCC----CCCC
Confidence            7542 2233345679999999999875 45889999999999999999999999888888777776654433    2468


Q ss_pred             CHHHHHHHHHhccCCccCcCCHH----HHhCCCccccC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTAA----QALSHPWVREG  228 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~~----e~l~h~~~~~~  228 (429)
                      +..+.++|.+||+.||.+|+++.    ++++|+||...
T Consensus       220 ~~~~~~li~~~l~~~p~~R~~~~~~~~~i~~~~~~~~~  257 (325)
T cd05602         220 TNSARHLLEGLLQKDRTKRLGAKDDFMEIKNHIFFSPI  257 (325)
T ss_pred             CHHHHHHHHHHcccCHHHCCCCCCCHHHHhcCcccCCC
Confidence            99999999999999999999865    89999999764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=100.00  E-value=2.4e-34  Score=269.58  Aligned_cols=188  Identities=26%  Similarity=0.412  Sum_probs=150.9

Q ss_pred             cceeEeeecCCCChHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           38 RKLRRIRLCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      ..|+|||||+||+|...+...  .+..+++..+..++.||+.||.|||++||+||||||+||+++   .++.++|+|||.
T Consensus        67 ~~~lv~e~~~~g~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~~l~dfg~  143 (280)
T cd05608          67 DLCLVMTIMNGGDLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLD---NDGNVRISDLGL  143 (280)
T ss_pred             eEEEEEeCCCCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEeeCcc
Confidence            357899999999998877542  335699999999999999999999999999999999999998   578899999999


Q ss_pred             ceeccCCCc-ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          116 SDFIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       116 a~~~~~~~~-~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      +........ .....|++.|+|||.+.+ .++.++|+||+||++|+|++|+.||...........+.......+....+.
T Consensus       144 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (280)
T cd05608         144 AVELKDGQSKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRILNDSVTYPDK  223 (280)
T ss_pred             ceecCCCCccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchhHHHHHHhhcccCCCCccc
Confidence            876644322 234578999999999874 458899999999999999999999976543322222222111112222346


Q ss_pred             CCHHHHHHHHHhccCCccCcC-----CHHHHhCCCccccC
Q 014171          194 ISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG  228 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~-----s~~e~l~h~~~~~~  228 (429)
                      ++..+.+++.+||+.||.+||     +++++++||||+..
T Consensus       224 ~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h~~~~~~  263 (280)
T cd05608         224 FSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTHPLFRDL  263 (280)
T ss_pred             CCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcChhhhcC
Confidence            899999999999999999999     88999999999874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=100.00  E-value=4.2e-34  Score=271.04  Aligned_cols=188  Identities=25%  Similarity=0.393  Sum_probs=145.7

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||. |+|.+++... .+.+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++
T Consensus        76 ~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~---~~~~~kl~Dfg~~  150 (303)
T cd07869          76 ETLTLVFEYVH-TDLCQYMDKH-PGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLIS---DTGELKLADFGLA  150 (303)
T ss_pred             CeEEEEEECCC-cCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEECCCCcc
Confidence            34578999996 6888887654 36789999999999999999999999999999999999998   5788999999998


Q ss_pred             eeccCC-CcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChh-HHHHHHHhc--CC------
Q 014171          117 DFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLRN--KP------  184 (429)
Q Consensus       117 ~~~~~~-~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~~~--~~------  184 (429)
                      ...... .......+++.|+|||++.+  .++.++|+||+||++|+|++|..||.+.... .....+...  .+      
T Consensus       151 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (303)
T cd07869         151 RAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWP  230 (303)
T ss_pred             eeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhcc
Confidence            754322 22344578899999998854  3578899999999999999999999875432 222222211  00      


Q ss_pred             ------CCCCCC------------C--CCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          185 ------DFRRKP------------W--PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       185 ------~~~~~~------------~--~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                            .+.+..            +  ...++.+++|+.+||+.||.+|||++++++||||+...
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~h~~f~~~~  295 (303)
T cd07869         231 GVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALSHEYFSDLP  295 (303)
T ss_pred             chhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhcCcccccCC
Confidence                  000000            0  12456789999999999999999999999999998753

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=100.00  E-value=2.7e-34  Score=270.15  Aligned_cols=183  Identities=26%  Similarity=0.419  Sum_probs=145.0

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.+|.+.. +.. ....+++..+..++.||+.||.|||+.||+||||||+||+++   .++.+||+|||++.
T Consensus        74 ~~~lv~e~~~~~~l~~-~~~-~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~---~~~~~kl~Dfg~~~  148 (287)
T cd07848          74 KLYLVFEYVEKNMLEL-LEE-MPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLIS---HNDVLKLCDFGFAR  148 (287)
T ss_pred             EEEEEEecCCCCHHHH-HHh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCcEEEeeccCcc
Confidence            3578999999876654 332 236799999999999999999999999999999999999998   57889999999998


Q ss_pred             eccCCC--cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcC-----------
Q 014171          118 FIKPGK--KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK-----------  183 (429)
Q Consensus       118 ~~~~~~--~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~-----------  183 (429)
                      ......  ......|++.|+|||++.+ .++.++|+||+||++|+|++|++||.+.+..+....+....           
T Consensus       149 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (287)
T cd07848         149 NLSEGSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLF  228 (287)
T ss_pred             cccccccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhh
Confidence            764322  2234578999999999864 46889999999999999999999998776544433322211           


Q ss_pred             ---CCC-----CC---------CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          184 ---PDF-----RR---------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       184 ---~~~-----~~---------~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                         +.+     +.         .....++..+.+||.+||+.||.+|||++++++||||
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~hp~f  287 (287)
T cd07848         229 YSNPRFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLNHPAF  287 (287)
T ss_pred             hccchhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence               000     00         0012367889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=100.00  E-value=6.2e-34  Score=266.37  Aligned_cols=185  Identities=26%  Similarity=0.418  Sum_probs=152.4

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+||||+.||+|.+++.......+++..+..++.|++.||.|||+.||+||||||+||+++   .++.++|+|||++.
T Consensus        67 ~~~lv~e~~~g~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~---~~~~~~l~Dfg~~~  143 (277)
T cd05607          67 HLCLVMSLMNGGDLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLD---DQGNCRLSDLGLAV  143 (277)
T ss_pred             eEEEEEecCCCCCHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEc---CCCCEEEeeceeee
Confidence            357899999999999988766556799999999999999999999999999999999999998   57889999999988


Q ss_pred             eccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChh----HHHHHHHhcCCCCCCCCCC
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED----GIFKEVLRNKPDFRRKPWP  192 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~----~~~~~i~~~~~~~~~~~~~  192 (429)
                      ............|++.|+|||++.+ .++.++|+||+||++|+|++|+.||......    ............+   ...
T Consensus       144 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---~~~  220 (277)
T cd05607         144 ELKDGKTITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKVAKEELKRRTLEDEVKF---EHQ  220 (277)
T ss_pred             ecCCCceeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchhhHHHHHHHhhcccccc---ccc
Confidence            7665444445678999999999864 4688999999999999999999999764332    2233333322222   123


Q ss_pred             CCCHHHHHHHHHhccCCccCcCCH----HHHhCCCccccC
Q 014171          193 SISNSAKDFVKKLLVKDPRARLTA----AQALSHPWVREG  228 (429)
Q Consensus       193 ~~~~~~~~li~~~l~~dp~~R~s~----~e~l~h~~~~~~  228 (429)
                      .++.+++++|.+||+.||.+||++    ++++.|+||+..
T Consensus       221 ~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~~~h~~f~~~  260 (277)
T cd05607         221 NFTEESKDICRLFLAKKPEDRLGSREKNDDPRKHEFFKTI  260 (277)
T ss_pred             cCCHHHHHHHHHHhccCHhhCCCCccchhhhhcChhhcCC
Confidence            579999999999999999999999    678899999874

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=100.00  E-value=3e-34  Score=274.26  Aligned_cols=183  Identities=26%  Similarity=0.425  Sum_probs=155.2

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||+||+|...+...  ..+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++
T Consensus        69 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~~  143 (321)
T cd05603          69 EKLYFVLDYVNGGELFFHLQRE--RCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLD---SQGHVVLTDFGLC  143 (321)
T ss_pred             CEEEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEEC---CCCCEEEccCCCC
Confidence            3457899999999999888543  6799999999999999999999999999999999999998   5789999999998


Q ss_pred             eecc-CCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DFIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~~~-~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      .... .........|++.|+|||++.+ .++.++|+||+||++|+|++|..||.+.+.......+......++    +..
T Consensus       144 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~----~~~  219 (321)
T cd05603         144 KEGVEPEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILHKPLQLP----GGK  219 (321)
T ss_pred             ccCCCCCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhcCCCCCC----CCC
Confidence            7532 2223345578999999999865 468899999999999999999999998887777777776554333    357


Q ss_pred             CHHHHHHHHHhccCCccCcCCH----HHHhCCCccccC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTA----AQALSHPWVREG  228 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~----~e~l~h~~~~~~  228 (429)
                      +..+.++|.+||+.||.+|+++    .++++|+||...
T Consensus       220 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~~~~~~~  257 (321)
T cd05603         220 TVAACDLLVGLLHKDQRRRLGAKADFLEIKNHVFFSPI  257 (321)
T ss_pred             CHHHHHHHHHHccCCHhhcCCCCCCHHHHhCCCCcCCC
Confidence            8899999999999999999875    599999999764

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=100.00  E-value=5.8e-34  Score=272.52  Aligned_cols=183  Identities=26%  Similarity=0.460  Sum_probs=158.7

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||+||+|.+++...  +.+++..+..++.||+.||.|||++||+||||||+|||++   .++.+||+|||++
T Consensus        74 ~~~~lv~E~~~~g~L~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~---~~~~~kL~DfG~~  148 (323)
T cd05616          74 DRLYFVMEYVNGGDLMYQIQQV--GRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD---SEGHIKIADFGMC  148 (323)
T ss_pred             CEEEEEEcCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEEC---CCCcEEEccCCCc
Confidence            3457999999999999988554  6799999999999999999999999999999999999998   5789999999998


Q ss_pred             eeccC-CCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DFIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~~~~-~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      ..... ........|++.|+|||++.+ .++.++|+||+||++|+|++|+.||.+.+.......+......++    ..+
T Consensus       149 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~~~~~~p----~~~  224 (323)
T cd05616         149 KENMWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP----KSM  224 (323)
T ss_pred             eecCCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----CcC
Confidence            75432 223345678999999999875 468999999999999999999999999888888888877665544    357


Q ss_pred             CHHHHHHHHHhccCCccCcCC-----HHHHhCCCccccC
Q 014171          195 SNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG  228 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s-----~~e~l~h~~~~~~  228 (429)
                      +.++.+++.+||+.||.+|++     ..++++||||+..
T Consensus       225 s~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~~~~~  263 (323)
T cd05616         225 SKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI  263 (323)
T ss_pred             CHHHHHHHHHHcccCHHhcCCCCCCCHHHHhcCCCcCCC
Confidence            999999999999999999997     4899999999864

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=7.6e-34  Score=285.25  Aligned_cols=184  Identities=29%  Similarity=0.472  Sum_probs=156.9

Q ss_pred             cceeEeeecCCCChHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           38 RKLRRIRLCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      ..|+|||||+||+|.+++...  ....+++..+..++.||+.||.|||++||+||||||+||+++   ..+.+||+|||+
T Consensus       139 ~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~---~~~~~kL~DFgl  215 (478)
T PTZ00267        139 KLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLM---PTGIIKLGDFGF  215 (478)
T ss_pred             EEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEEC---CCCcEEEEeCcC
Confidence            356899999999999988543  235689999999999999999999999999999999999998   578999999999


Q ss_pred             ceeccCCC---cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCC
Q 014171          116 SDFIKPGK---KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW  191 (429)
Q Consensus       116 a~~~~~~~---~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  191 (429)
                      +.......   .....+||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+.+.......+..+....   ..
T Consensus       216 a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~---~~  292 (478)
T PTZ00267        216 SKQYSDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGKYDP---FP  292 (478)
T ss_pred             ceecCCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC---CC
Confidence            98764332   2345579999999999864 46889999999999999999999998888877777777655431   22


Q ss_pred             CCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcccc
Q 014171          192 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE  227 (429)
Q Consensus       192 ~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~  227 (429)
                      ..++..++++|.+||..||.+||++.+++.|+|++.
T Consensus       293 ~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~~~~~~  328 (478)
T PTZ00267        293 CPVSSGMKALLDPLLSKNPALRPTTQQLLHTEFLKY  328 (478)
T ss_pred             ccCCHHHHHHHHHHhccChhhCcCHHHHHhCHHHHH
Confidence            357899999999999999999999999999999865

>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]

Probab=100.00  E-value=5.1e-34  Score=271.12  Aligned_cols=197  Identities=22%  Similarity=0.292  Sum_probs=166.7

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH   85 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~   85 (429)
                      |+.++|+|++++.+++....            ..||||||+..|+|.++|.+..+..+...+...++.|||+|++||+++
T Consensus       255 Mk~L~H~~lV~l~gV~~~~~------------piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~  322 (468)
T KOG0197|consen  255 MKKLRHEKLVKLYGVCTKQE------------PIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESK  322 (468)
T ss_pred             HHhCcccCeEEEEEEEecCC------------ceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhC
Confidence            56788888888888777521            235789999999999999876667899999999999999999999999


Q ss_pred             CCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCccccc--ccCCccccccccc-CCCCCCcchHHHHHHHHHHhh
Q 014171           86 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI--VGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC  162 (429)
Q Consensus        86 ~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~--~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~  162 (429)
                      ++|||||-..|||++   ++..+||+|||+|+.+.........  --...|.|||.+. +.++.+||||||||+||||+|
T Consensus       323 ~~IHRDLAARNiLV~---~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT  399 (468)
T KOG0197|consen  323 NYIHRDLAARNILVD---EDLVVKISDFGLARLIGDDEYTASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFT  399 (468)
T ss_pred             Cccchhhhhhheeec---cCceEEEcccccccccCCCceeecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhc
Confidence            999999999999999   5889999999999965443332221  1245799999996 678999999999999999999


Q ss_pred             -CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHh
Q 014171          163 -GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL  220 (429)
Q Consensus       163 -g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l  220 (429)
                       |+.||.+.+..+.+..+..+..- ++  ++.+|+.+.+++..||..+|++|||++.+.
T Consensus       400 ~G~~py~~msn~ev~~~le~GyRl-p~--P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~  455 (468)
T KOG0197|consen  400 YGRVPYPGMSNEEVLELLERGYRL-PR--PEGCPDEVYELMKSCWHEDPEDRPTFETLR  455 (468)
T ss_pred             cCCCCCCCCCHHHHHHHHhccCcC-CC--CCCCCHHHHHHHHHHhhCCcccCCCHHHHH
Confidence             99999999999999988887643 33  246999999999999999999999998553

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=100.00  E-value=1.6e-34  Score=280.58  Aligned_cols=185  Identities=28%  Similarity=0.495  Sum_probs=153.9

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||+||+|.+++.+.  +.+++..++.++.|++.||.|||++||+||||||+||+++   .++.++|+|||++.
T Consensus        75 ~~~lv~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~---~~~~vkL~DfG~~~  149 (360)
T cd05627          75 NLYLIMEFLPGGDMMTLLMKK--DTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLD---AKGHVKLSDFGLCT  149 (360)
T ss_pred             EEEEEEeCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEEC---CCCCEEEeeccCCc
Confidence            357899999999999998654  6799999999999999999999999999999999999998   57899999999986


Q ss_pred             eccCCC------------------------------------cccccccCCcccccccccC-CCCCCcchHHHHHHHHHH
Q 014171          118 FIKPGK------------------------------------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYIL  160 (429)
Q Consensus       118 ~~~~~~------------------------------------~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l  160 (429)
                      ......                                    .....+||+.|+|||++.+ .++.++|+||+||++|+|
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel  229 (360)
T cd05627         150 GLKKAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEM  229 (360)
T ss_pred             ccccccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeec
Confidence            542110                                    0123478999999999864 468899999999999999


Q ss_pred             hhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcC---CHHHHhCCCccccC
Q 014171          161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL---TAAQALSHPWVREG  228 (429)
Q Consensus       161 ~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~---s~~e~l~h~~~~~~  228 (429)
                      ++|+.||.+.+.......+.........+....++++++++|.+|+ .||.+|+   +++++++||||+..
T Consensus       230 ~tG~~Pf~~~~~~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~hp~f~~~  299 (360)
T cd05627         230 LIGYPPFCSETPQETYRKVMNWKETLVFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKSHPFFEGV  299 (360)
T ss_pred             ccCCCCCCCCCHHHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhcCCCCCCC
Confidence            9999999998888887777754433322222347899999999987 4999998   48999999999875

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=4.7e-34  Score=289.54  Aligned_cols=185  Identities=28%  Similarity=0.462  Sum_probs=164.5

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      -|+||||++||+|..++.+.  .++|+..++.|+..|+.||..+|+.|+|||||||+|||++   ..|++||+|||.+-.
T Consensus       150 LYlVMdY~pGGDlltLlSk~--~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld---~~GHikLADFGsClk  224 (1317)
T KOG0612|consen  150 LYLVMDYMPGGDLLTLLSKF--DRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLD---KSGHIKLADFGSCLK  224 (1317)
T ss_pred             eEEEEecccCchHHHHHhhc--CCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEec---ccCcEeeccchhHHh
Confidence            47899999999999999766  4899999999999999999999999999999999999999   699999999999887


Q ss_pred             ccCCCc--ccccccCCccccccccc------CCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCC
Q 014171          119 IKPGKK--FQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP  190 (429)
Q Consensus       119 ~~~~~~--~~~~~g~~~y~aPE~~~------~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  190 (429)
                      +...+.  ....+|||-|.|||++.      +.|++.+|+||+||++|||+.|..||+..+.-+++.+|+...-.+..|.
T Consensus       225 m~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~hk~~l~FP~  304 (1317)
T KOG0612|consen  225 MDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMNHKESLSFPD  304 (1317)
T ss_pred             cCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhchhhhcCCCc
Confidence            775443  45668999999999994      4568999999999999999999999999999999999998755444444


Q ss_pred             CCCCCHHHHHHHHHhccCCccCcCC---HHHHhCCCccccCC
Q 014171          191 WPSISNSAKDFVKKLLVKDPRARLT---AAQALSHPWVREGG  229 (429)
Q Consensus       191 ~~~~~~~~~~li~~~l~~dp~~R~s---~~e~l~h~~~~~~~  229 (429)
                      ...+|..+++||.+++.. |..|..   ++++-.||||.+..
T Consensus       305 ~~~VSeeakdLI~~ll~~-~e~RLgrngiedik~HpFF~g~~  345 (1317)
T KOG0612|consen  305 ETDVSEEAKDLIEALLCD-REVRLGRNGIEDIKNHPFFEGID  345 (1317)
T ss_pred             ccccCHHHHHHHHHHhcC-hhhhcccccHHHHHhCccccCCC
Confidence            456999999999999865 999988   99999999999754

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=100.00  E-value=9.1e-34  Score=271.58  Aligned_cols=183  Identities=29%  Similarity=0.475  Sum_probs=149.9

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||+||+|..++...  +.+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++
T Consensus        69 ~~~~lv~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~---~~~~~kl~Dfg~~  143 (327)
T cd05617          69 SRLFLVIEYVNGGDLMFHMQRQ--RKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLD---ADGHIKLTDYGMC  143 (327)
T ss_pred             CEEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEe---CCCCEEEeccccc
Confidence            3457899999999999888544  6799999999999999999999999999999999999998   5788999999998


Q ss_pred             eecc-CCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCC-------hhHHHHHHHhcCCCCC
Q 014171          117 DFIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKT-------EDGIFKEVLRNKPDFR  187 (429)
Q Consensus       117 ~~~~-~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~-------~~~~~~~i~~~~~~~~  187 (429)
                      .... ........+|++.|+|||++.+ .++.++|+||+||++|+|++|+.||....       .......+......+ 
T Consensus       144 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~-  222 (327)
T cd05617         144 KEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRI-  222 (327)
T ss_pred             eeccCCCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCC-
Confidence            7532 2333345679999999999864 46889999999999999999999995422       122333333333222 


Q ss_pred             CCCCCCCCHHHHHHHHHhccCCccCcCC------HHHHhCCCccccC
Q 014171          188 RKPWPSISNSAKDFVKKLLVKDPRARLT------AAQALSHPWVREG  228 (429)
Q Consensus       188 ~~~~~~~~~~~~~li~~~l~~dp~~R~s------~~e~l~h~~~~~~  228 (429)
                         +..++..+.++|.+||+.||.+|++      ++++++||||+..
T Consensus       223 ---p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~h~~f~~~  266 (327)
T cd05617         223 ---PRFLSVKASHVLKGFLNKDPKERLGCQPQTGFSDIKSHTFFRSI  266 (327)
T ss_pred             ---CCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHHcCCCCCCC
Confidence               2357899999999999999999997      5799999999875

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=100.00  E-value=1.6e-33  Score=283.31  Aligned_cols=184  Identities=28%  Similarity=0.474  Sum_probs=157.5

Q ss_pred             ceeEeeecCCCChHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           39 KLRRIRLCEGGELLDRILAKK--DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      .++||||+.+|+|.+++....  ...+++..+..++.|++.||.|||++||+||||||+||+++   .++.+||+|||++
T Consensus       114 i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~---~~~~vkL~DFGls  190 (496)
T PTZ00283        114 IALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLC---SNGLVKLGDFGFS  190 (496)
T ss_pred             EEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEe---CCCCEEEEecccC
Confidence            368999999999999986532  35699999999999999999999999999999999999998   4789999999998


Q ss_pred             eeccCC---CcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCC
Q 014171          117 DFIKPG---KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP  192 (429)
Q Consensus       117 ~~~~~~---~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  192 (429)
                      +.....   .......||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+.+.......+..+....   ..+
T Consensus       191 ~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~---~~~  267 (496)
T PTZ00283        191 KMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDP---LPP  267 (496)
T ss_pred             eeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCC---CCC
Confidence            765432   22345679999999999875 46899999999999999999999999888877777776654332   235


Q ss_pred             CCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          193 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       193 ~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      .+++++.+++.+||+.||.+||++.++++|||++..
T Consensus       268 ~~~~~l~~li~~~L~~dP~~RPs~~ell~~p~~~~~  303 (496)
T PTZ00283        268 SISPEMQEIVTALLSSDPKRRPSSSKLLNMPICKLF  303 (496)
T ss_pred             CCCHHHHHHHHHHcccChhhCcCHHHHHhCHHHHHh
Confidence            689999999999999999999999999999998753

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=100.00  E-value=2.4e-33  Score=272.74  Aligned_cols=182  Identities=26%  Similarity=0.405  Sum_probs=147.3

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+||||+. ++|...+.    ..+++..+..++.|++.||.|||++||+||||||+||+++   .++.+||+|||++..
T Consensus       104 ~~lv~e~~~-~~l~~~~~----~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kL~DfG~a~~  175 (364)
T cd07875         104 VYIVMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKILDFGLART  175 (364)
T ss_pred             EEEEEeCCC-CCHHHHHH----hcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEEC---CCCcEEEEeCCCccc
Confidence            478999997 47777663    3588999999999999999999999999999999999998   578899999999987


Q ss_pred             ccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCC------------
Q 014171          119 IKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD------------  185 (429)
Q Consensus       119 ~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~------------  185 (429)
                      ...........+++.|+|||++.+ .++.++||||+||++|+|++|+.||.+.+.......+......            
T Consensus       176 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (364)
T cd07875         176 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPT  255 (364)
T ss_pred             cCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhhHH
Confidence            655444456678999999999865 4588999999999999999999999887766655554432110            


Q ss_pred             ----------CCC----------------CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          186 ----------FRR----------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       186 ----------~~~----------------~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                                +..                ......+..+++||.+||+.||.+|||+.++|+||||...
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~hp~~~~~  324 (364)
T cd07875         256 VRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW  324 (364)
T ss_pred             HHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcCcccccc
Confidence                      000                0001134678999999999999999999999999999753

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=100.00  E-value=9.8e-34  Score=266.15  Aligned_cols=185  Identities=26%  Similarity=0.468  Sum_probs=152.3

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+||||+.||+|.+++.......+++..+..++.|++.||.|||+.||+||||||+||+++   .++.++|+|||++.
T Consensus        74 ~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~---~~~~~~l~Dfg~~~  150 (285)
T cd05630          74 ALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLD---DHGHIRISDLGLAV  150 (285)
T ss_pred             EEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEEC---CCCCEEEeecccee
Confidence            357899999999999988665556799999999999999999999999999999999999998   47789999999987


Q ss_pred             eccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhH---HHHHHHhcCCCCCCCCCCC
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDG---IFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~~~~  193 (429)
                      ............|+..|+|||++.+ .++.++|+||+||++|+|++|+.||.......   .........   .......
T Consensus       151 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~~~~~~~~~~---~~~~~~~  227 (285)
T cd05630         151 HVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEV---QEEYSEK  227 (285)
T ss_pred             ecCCCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHHHHHhhhhhh---hhhcCcc
Confidence            6654444445678999999999864 46889999999999999999999997654322   222222111   1122345


Q ss_pred             CCHHHHHHHHHhccCCccCcCC-----HHHHhCCCccccC
Q 014171          194 ISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG  228 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s-----~~e~l~h~~~~~~  228 (429)
                      +++++++|+.+||+.||.+|||     ++++++||||++.
T Consensus       228 ~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h~~~~~~  267 (285)
T cd05630         228 FSPDARSLCKMLLCKDPKERLGCQGGGAREVKEHPLFKQI  267 (285)
T ss_pred             CCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcChhhhcc
Confidence            7899999999999999999999     9999999999864

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=100.00  E-value=2.2e-33  Score=269.48  Aligned_cols=186  Identities=25%  Similarity=0.355  Sum_probs=148.7

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~-~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ..++|||||.||+|.+++...  ..+++..+..++.|++.||.|||+. +|+||||||+||+++   .++.++|+|||++
T Consensus        77 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~~  151 (331)
T cd06649          77 EISICMEHMDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVN---SRGEIKLCDFGVS  151 (331)
T ss_pred             EEEEEeecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEc---CCCcEEEccCccc
Confidence            357899999999999998654  5799999999999999999999986 699999999999998   5788999999998


Q ss_pred             eeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcC------------
Q 014171          117 DFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK------------  183 (429)
Q Consensus       117 ~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~------------  183 (429)
                      ...... ......|++.|+|||++.+ .++.++|+||+||++|+|++|+.||......+....+....            
T Consensus       152 ~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (331)
T cd06649         152 GQLIDS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSIS  230 (331)
T ss_pred             cccccc-ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccC
Confidence            765432 2344578999999999875 46889999999999999999999997655443322111000            


Q ss_pred             --------------------------------CCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          184 --------------------------------PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       184 --------------------------------~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                                                      ...+......++.++++||.+||+.||++|||+.++++||||+...
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~  308 (331)
T cd06649         231 PRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTFIKRSE  308 (331)
T ss_pred             cccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChHHhhcc
Confidence                                            0001111124678999999999999999999999999999998753

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=100.00  E-value=3.3e-33  Score=260.55  Aligned_cols=205  Identities=26%  Similarity=0.416  Sum_probs=160.4

Q ss_pred             ccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 014171           10 RSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH   89 (429)
Q Consensus        10 ~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H   89 (429)
                      +|+|++.+.+.+....+.+.      ....|+|||||.+|+|.+++...+...+++..+..++.|++.||.|||+++|+|
T Consensus        61 ~h~~i~~~~~~~~~~~~~~~------~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh  134 (272)
T cd06637          61 HHRNIATYYGAFIKKNPPGM------DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIH  134 (272)
T ss_pred             CCCCeeeEeeEEeecCCCCC------CcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCcc
Confidence            46666666555443222111      123468999999999999997765667999999999999999999999999999


Q ss_pred             cCCCCCcEEEeecCCCCCEEEeecccceeccCC-CcccccccCCcccccccccC------CCCCCcchHHHHHHHHHHhh
Q 014171           90 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLC  162 (429)
Q Consensus        90 ~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~~~~------~~~~~~DiwslG~il~~l~~  162 (429)
                      +||+|+||+++   .++.++|+|||++...... .......|++.|+|||++.+      .++.++|+||+||++|+|++
T Consensus       135 ~dl~~~nili~---~~~~~~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~  211 (272)
T cd06637         135 RDIKGQNVLLT---ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAE  211 (272)
T ss_pred             CCCCHHHEEEC---CCCCEEEccCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHh
Confidence            99999999998   5778999999998765432 22344578899999998842      35778999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       163 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                      |+.||...........+....  ........++..+++|+.+||+.+|.+|||+.+++.||||
T Consensus       212 g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~~  272 (272)
T cd06637         212 GAPPLCDMHPMRALFLIPRNP--APRLKSKKWSKKFQSFIESCLVKNHSQRPTTEQLMKHPFI  272 (272)
T ss_pred             CCCCccccCHHHHHHHHhcCC--CCCCCCCCcCHHHHHHHHHHcCCChhhCCCHHHHhhCCCC
Confidence            999997665544444333322  1222234578899999999999999999999999999997

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=100.00  E-value=1.7e-33  Score=272.89  Aligned_cols=207  Identities=26%  Similarity=0.390  Sum_probs=156.6

Q ss_pred             ccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 014171            8 DTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGL   87 (429)
Q Consensus         8 ~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i   87 (429)
                      .++|+|++.+++++.......      .....|+|||||.+ +|.+.+.    ..+++..+..++.|++.||.|||++||
T Consensus        72 ~l~h~niv~~~~~~~~~~~~~------~~~~~~lv~e~~~~-~l~~~~~----~~l~~~~~~~~~~qi~~aL~~LH~~gi  140 (355)
T cd07874          72 CVNHKNIISLLNVFTPQKSLE------EFQDVYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAGI  140 (355)
T ss_pred             HhCCCchhceeeeeecccccc------ccceeEEEhhhhcc-cHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            455666666666554321111      11234789999975 6766663    358999999999999999999999999


Q ss_pred             eecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCC
Q 014171           88 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRP  166 (429)
Q Consensus        88 ~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~p  166 (429)
                      +||||||+||+++   .++.+||+|||++.............|++.|+|||++.+ .++.++|+||+||++|+|++|+.|
T Consensus       141 vHrDikp~Nill~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~p  217 (355)
T cd07874         141 IHRDLKPSNIVVK---SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKIL  217 (355)
T ss_pred             ccCCCChHHEEEC---CCCCEEEeeCcccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence            9999999999998   478899999999987655544556688999999999865 468899999999999999999999


Q ss_pred             CCCCChhHHHHHHHhcC----------------------CCCC----------------CCCCCCCCHHHHHHHHHhccC
Q 014171          167 FWDKTEDGIFKEVLRNK----------------------PDFR----------------RKPWPSISNSAKDFVKKLLVK  208 (429)
Q Consensus       167 f~~~~~~~~~~~i~~~~----------------------~~~~----------------~~~~~~~~~~~~~li~~~l~~  208 (429)
                      |.+.........+....                      +.+.                .......+..+++||.+||+.
T Consensus       218 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~  297 (355)
T cd07874         218 FPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVI  297 (355)
T ss_pred             CCCCCHHHHHHHHHHHhCCCCHHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcC
Confidence            98776544433222110                      0000                000112356789999999999


Q ss_pred             CccCcCCHHHHhCCCccccC
Q 014171          209 DPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       209 dp~~R~s~~e~l~h~~~~~~  228 (429)
                      ||.+|||+.++++||||...
T Consensus       298 dP~~Rps~~ell~hp~~~~~  317 (355)
T cd07874         298 DPAKRISVDEALQHPYINVW  317 (355)
T ss_pred             CchhcCCHHHHhcCcchhcc
Confidence            99999999999999999754

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1e-33  Score=271.06  Aligned_cols=207  Identities=27%  Similarity=0.436  Sum_probs=172.2

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH   85 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~   85 (429)
                      ++++.||+++.++.-+            |.....+++.|||.||-.-..+... +..|++.++..+++|+|.||.|||++
T Consensus        83 La~CdHP~ivkLl~ay------------y~enkLwiliEFC~GGAVDaimlEL-~r~LtE~QIqvvc~q~ldALn~LHs~  149 (1187)
T KOG0579|consen   83 LAECDHPVIVKLLSAY------------YFENKLWILIEFCGGGAVDAIMLEL-GRVLTEDQIQVVCYQVLDALNWLHSQ  149 (1187)
T ss_pred             hhcCCChHHHHHHHHH------------hccCceEEEEeecCCchHhHHHHHh-ccccchHHHHHHHHHHHHHHHHHhhc
Confidence            4567777776666532            3345557889999999988877765 57899999999999999999999999


Q ss_pred             CCeecCCCCCcEEEeecCCCCCEEEeecccceeccC-CCcccccccCCccccccccc------CCCCCCcchHHHHHHHH
Q 014171           86 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITY  158 (429)
Q Consensus        86 ~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~-~~~~~~~~g~~~y~aPE~~~------~~~~~~~DiwslG~il~  158 (429)
                      +|+|||||..|||++.   +|.++|+|||.+..... .....+++|||+|||||+..      .+|..++||||||++|.
T Consensus       150 ~iIHRDLKAGNiL~Tl---dGdirLADFGVSAKn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLI  226 (1187)
T KOG0579|consen  150 NIIHRDLKAGNILLTL---DGDIRLADFGVSAKNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLI  226 (1187)
T ss_pred             chhhhhccccceEEEe---cCcEeeecccccccchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHH
Confidence            9999999999999994   78999999998765432 33456789999999999873      36788999999999999


Q ss_pred             HHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          159 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       159 ~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      +|..+.+|-...++-..+-+|....+..... +...+..+++|+.+||..||..||++.++|+||||.+..
T Consensus       227 EMAqiEPPHhelnpMRVllKiaKSePPTLlq-PS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~Hpfv~~~~  296 (1187)
T KOG0579|consen  227 EMAQIEPPHHELNPMRVLLKIAKSEPPTLLQ-PSHWSRSFSDFLKRCLVKNPRNRPPAAQLLKHPFVQNAP  296 (1187)
T ss_pred             HHhccCCCccccchHHHHHHHhhcCCCcccC-cchhhhHHHHHHHHHHhcCCccCCCHHHHhhCcccccCC
Confidence            9999999998888888887777666543222 234588899999999999999999999999999998764

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=100.00  E-value=2.9e-33  Score=267.69  Aligned_cols=184  Identities=25%  Similarity=0.449  Sum_probs=158.3

Q ss_pred             cccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           36 PLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        36 ~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      ....|+|||||+||+|.+++...  +.+++.++..++.||+.||.|||++||+||||||+||+++   .++.++|+|||+
T Consensus        73 ~~~~~lv~Ey~~~g~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~---~~~~ikL~Dfg~  147 (323)
T cd05615          73 VDRLYFVMEYVNGGDLMYHIQQV--GKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLD---SEGHIKIADFGM  147 (323)
T ss_pred             CCEEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---CCCCEEEecccc
Confidence            34468999999999999988544  6799999999999999999999999999999999999998   578899999999


Q ss_pred             ceeccCC-CcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          116 SDFIKPG-KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       116 a~~~~~~-~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      +...... .......||+.|+|||++.+ .++.++|+||+||++|+|++|+.||.+.+.......+......++    ..
T Consensus       148 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~~~~~~p----~~  223 (323)
T cd05615         148 CKEHMVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEHNVSYP----KS  223 (323)
T ss_pred             ccccCCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----cc
Confidence            8754322 22344578999999999864 468899999999999999999999999888888888877665443    35


Q ss_pred             CCHHHHHHHHHhccCCccCcCC-----HHHHhCCCccccC
Q 014171          194 ISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG  228 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s-----~~e~l~h~~~~~~  228 (429)
                      ++.++.+++.+||+.+|.+|++     .+++++||||+..
T Consensus       224 ~~~~~~~li~~~l~~~p~~R~~~~~~~~~~i~~h~~f~~~  263 (323)
T cd05615         224 LSKEAVSICKGLMTKHPSKRLGCGPEGERDIREHAFFRRI  263 (323)
T ss_pred             CCHHHHHHHHHHcccCHhhCCCCCCCCHHHHhcCcccCCC
Confidence            7899999999999999999997     5799999999864

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=3e-34  Score=277.27  Aligned_cols=209  Identities=24%  Similarity=0.341  Sum_probs=168.3

Q ss_pred             eecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCC--CHHHHHHHHHHHHHHHHHH
Q 014171            5 LIGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRY--TEKDAAVVVRQMLRVAAEC   82 (429)
Q Consensus         5 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l--~~~~~~~i~~qil~aL~~l   82 (429)
                      |.+.++|.|+++.++.+...    ....        +.||-++||+|.+++.. +-+++  .|..+..+.+||++||.||
T Consensus       625 LH~~LrHkNIVrYLGs~sen----Gf~k--------IFMEqVPGGSLSsLLrs-kWGPlKDNEstm~fYtkQILeGLkYL  691 (1226)
T KOG4279|consen  625 LHSTLRHKNIVRYLGSVSEN----GFFK--------IFMEQVPGGSLSSLLRS-KWGPLKDNESTMNFYTKQILEGLKYL  691 (1226)
T ss_pred             HHHHHhhHhHHHHhhccCCC----CeEE--------EEeecCCCCcHHHHHHh-ccCCCccchhHHHHHHHHHHHHhhhh
Confidence            34566777777777765542    1222        45899999999997754 46788  8999999999999999999


Q ss_pred             HHCCCeecCCCCCcEEEeecCCCCCEEEeecccceeccC-CCcccccccCCccccccccc---CCCCCCcchHHHHHHHH
Q 014171           83 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLK---RKSGPESDVWSIGVITY  158 (429)
Q Consensus        83 H~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~-~~~~~~~~g~~~y~aPE~~~---~~~~~~~DiwslG~il~  158 (429)
                      |++.|||||||-+|+|++.  .+|.+||+|||-++++.. ++...+..||..|||||++.   .+|+.++|||||||++.
T Consensus       692 Hen~IVHRDIKGDNVLvNT--ySGvlKISDFGTsKRLAginP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~v  769 (1226)
T KOG4279|consen  692 HENKIVHRDIKGDNVLVNT--YSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMV  769 (1226)
T ss_pred             hhcceeeccccCCcEEEee--ccceEEecccccchhhccCCccccccccchhhhChHhhccCCcCCCchhhhhhccceeE
Confidence            9999999999999999996  789999999999987753 33446778999999999995   35799999999999999


Q ss_pred             HHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          159 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       159 ~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      ||.||++||.......... ..-+-+...++.+..++.+++.||.+|+.+||.+||+|.++|++||++...
T Consensus       770 EMATGrPPF~ElgspqAAM-FkVGmyKvHP~iPeelsaeak~FilrcFepd~~~R~sA~~LL~DpFlq~~~  839 (1226)
T KOG4279|consen  770 EMATGRPPFVELGSPQAAM-FKVGMYKVHPPIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQDPFLQHNN  839 (1226)
T ss_pred             eeccCCCCeeecCChhHhh-hhhcceecCCCCcHHHHHHHHHHHHHHcCCCcccCccHHHhccCcccccCC
Confidence            9999999997554332221 122223334444567899999999999999999999999999999998764

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=100.00  E-value=1.8e-33  Score=273.19  Aligned_cols=208  Identities=27%  Similarity=0.396  Sum_probs=154.8

Q ss_pred             ccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 014171            8 DTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGL   87 (429)
Q Consensus         8 ~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i   87 (429)
                      .++|+|++.+++++.......      .....|+||||+.+ +|...+.    ..+++..+..++.||+.||.|||++||
T Consensus        76 ~l~h~niv~~~~~~~~~~~~~------~~~~~~lv~e~~~~-~l~~~~~----~~~~~~~~~~~~~qi~~~L~~LH~~~i  144 (359)
T cd07876          76 CVNHKNIISLLNVFTPQKSLE------EFQDVYLVMELMDA-NLCQVIH----MELDHERMSYLLYQMLCGIKHLHSAGI  144 (359)
T ss_pred             hCCCCCEeeeeeeeccCCCcc------ccceeEEEEeCCCc-CHHHHHh----ccCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            445666666555443321110      11224689999975 5666652    358999999999999999999999999


Q ss_pred             eecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCC
Q 014171           88 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRP  166 (429)
Q Consensus        88 ~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~p  166 (429)
                      +||||||+||+++   .++.+||+|||++.............||+.|+|||++.+ .++.++||||+||++|+|++|+.|
T Consensus       145 vHrDlkp~NIl~~---~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~p  221 (359)
T cd07876         145 IHRDLKPSNIVVK---SDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVI  221 (359)
T ss_pred             ccCCCCHHHEEEC---CCCCEEEecCCCccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCC
Confidence            9999999999998   578999999999976554444455678999999999875 468899999999999999999999


Q ss_pred             CCCCChhHHHHHHHh----------------------cCCCCCCC----------------CCCCCCHHHHHHHHHhccC
Q 014171          167 FWDKTEDGIFKEVLR----------------------NKPDFRRK----------------PWPSISNSAKDFVKKLLVK  208 (429)
Q Consensus       167 f~~~~~~~~~~~i~~----------------------~~~~~~~~----------------~~~~~~~~~~~li~~~l~~  208 (429)
                      |.+.+....+..+..                      ..+..+..                .....+..+++||.+||+.
T Consensus       222 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~  301 (359)
T cd07876         222 FQGTDHIDQWNKVIEQLGTPSAEFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVI  301 (359)
T ss_pred             CCCCCHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhcc
Confidence            987665433322211                      11111100                0012357799999999999


Q ss_pred             CccCcCCHHHHhCCCccccCC
Q 014171          209 DPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       209 dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      ||.+|||+.|+++||||+...
T Consensus       302 dP~~R~t~~e~l~hp~~~~~~  322 (359)
T cd07876         302 DPDKRISVDEALRHPYITVWY  322 (359)
T ss_pred             CcccCCCHHHHhcCchhhhhc
Confidence            999999999999999998643

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=100.00  E-value=5.1e-33  Score=261.31  Aligned_cols=190  Identities=29%  Similarity=0.449  Sum_probs=157.3

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+||||+.+|+|.+.+.......+++..+..++.|++.||.|||+.||+||||||+||+++   .++.++|+|||++
T Consensus        73 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~---~~~~~kl~Dfg~~  149 (285)
T cd05632          73 DALCLVLTIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLD---DYGHIRISDLGLA  149 (285)
T ss_pred             CEEEEEEEeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEC---CCCCEEEecCCcc
Confidence            3457899999999999888765556799999999999999999999999999999999999998   4678999999998


Q ss_pred             eeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          117 DFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       117 ~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      .............|+..|+|||.+.+ .++.++|+||+||++|+|++|..||.+.........+............+.++
T Consensus       150 ~~~~~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (285)
T cd05632         150 VKIPEGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEVDRRVLETEEVYSAKFS  229 (285)
T ss_pred             eecCCCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhhccccccCccCC
Confidence            76654444455678999999999864 46889999999999999999999998776554444333322222223335678


Q ss_pred             HHHHHHHHHhccCCccCcCC-----HHHHhCCCccccCC
Q 014171          196 NSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREGG  229 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s-----~~e~l~h~~~~~~~  229 (429)
                      ..+.+|+.+||+.||.+||+     +.++++|+||+...
T Consensus       230 ~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~~~~~~~~  268 (285)
T cd05632         230 EEAKSICKMLLTKDPKQRLGCQEEGAGEVKRHPFFRNMN  268 (285)
T ss_pred             HHHHHHHHHHccCCHhHcCCCcccChHHHHcChhhhcCC
Confidence            99999999999999999999     88999999998763

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=100.00  E-value=3.8e-33  Score=267.92  Aligned_cols=188  Identities=26%  Similarity=0.457  Sum_probs=155.8

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||.||+|.+++.+. ...+++..++.++.||+.||.|||++||+||||||+||+++   .++.+||+|||++
T Consensus        74 ~~~~lv~ey~~~g~L~~~l~~~-~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~---~~~~~kL~DfG~a  149 (332)
T cd05623          74 NNLYLVMDYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMD---MNGHIRLADFGSC  149 (332)
T ss_pred             CEEEEEEeccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEC---CCCCEEEeecchh
Confidence            3457899999999999998653 35799999999999999999999999999999999999998   5789999999998


Q ss_pred             eeccCCCc--ccccccCCccccccccc------CCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCC
Q 014171          117 DFIKPGKK--FQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR  188 (429)
Q Consensus       117 ~~~~~~~~--~~~~~g~~~y~aPE~~~------~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~  188 (429)
                      ........  .....||+.|+|||++.      +.++.++|+||+||++|+|++|+.||.+.+.......+......+..
T Consensus       150 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~  229 (332)
T cd05623         150 LKLMEDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQF  229 (332)
T ss_pred             eecccCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCccccC
Confidence            76543222  23357899999999985      24588999999999999999999999988888888777765443322


Q ss_pred             -CCCCCCCHHHHHHHHHhccCCccC--cCCHHHHhCCCccccC
Q 014171          189 -KPWPSISNSAKDFVKKLLVKDPRA--RLTAAQALSHPWVREG  228 (429)
Q Consensus       189 -~~~~~~~~~~~~li~~~l~~dp~~--R~s~~e~l~h~~~~~~  228 (429)
                       .....++.++++||.+||..++.+  |++++++++||||+..
T Consensus       230 p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h~~f~~~  272 (332)
T cd05623         230 PAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQHPFFTGI  272 (332)
T ss_pred             CCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCCCCcCCC
Confidence             223467999999999999765554  6899999999999864

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]

Probab=100.00  E-value=1.2e-33  Score=274.34  Aligned_cols=191  Identities=28%  Similarity=0.344  Sum_probs=158.2

Q ss_pred             ccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecc
Q 014171           35 LPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG  114 (429)
Q Consensus        35 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg  114 (429)
                      .....|||+|+++ -+|.+++..++-.+++...++.++.||+.||..||+.||||+||||+|||+.... ...||++|||
T Consensus       259 fr~HlciVfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~-r~~vKVIDFG  336 (586)
T KOG0667|consen  259 FRNHLCIVFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPK-RSRIKVIDFG  336 (586)
T ss_pred             cccceeeeehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCC-cCceeEEecc
Confidence            3455688999997 6999999988888999999999999999999999999999999999999998654 4589999999


Q ss_pred             cceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCC-------
Q 014171          115 LSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF-------  186 (429)
Q Consensus       115 ~a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~-------  186 (429)
                      .|+.......  +.+.++.|+|||++.| +|+.+.||||||||++||++|.+.|.|.++.+.+..|+.-.-..       
T Consensus       337 SSc~~~q~vy--tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~  414 (586)
T KOG0667|consen  337 SSCFESQRVY--TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDT  414 (586)
T ss_pred             cccccCCcce--eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence            9987764433  7788999999999876 67999999999999999999999999998887776655421100       


Q ss_pred             --------CC-----------C---------------------CCC-C-----------CCHHHHHHHHHhccCCccCcC
Q 014171          187 --------RR-----------K---------------------PWP-S-----------ISNSAKDFVKKLLVKDPRARL  214 (429)
Q Consensus       187 --------~~-----------~---------------------~~~-~-----------~~~~~~~li~~~l~~dp~~R~  214 (429)
                              ..           .                     ..| .           -...+.+||.+||..||.+|+
T Consensus       415 ~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~  494 (586)
T KOG0667|consen  415 AKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERI  494 (586)
T ss_pred             ccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcC
Confidence                    00           0                     000 0           113578999999999999999


Q ss_pred             CHHHHhCCCccccCC
Q 014171          215 TAAQALSHPWVREGG  229 (429)
Q Consensus       215 s~~e~l~h~~~~~~~  229 (429)
                      |+.++|+||||....
T Consensus       495 tp~qal~Hpfl~~~~  509 (586)
T KOG0667|consen  495 TPAQALNHPFLTGTS  509 (586)
T ss_pred             CHHHHhcCccccccc
Confidence            999999999999654

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=100.00  E-value=2.4e-33  Score=271.65  Aligned_cols=184  Identities=27%  Similarity=0.386  Sum_probs=145.0

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|||||.+|+|...      ...++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++..
T Consensus       147 ~~lv~e~~~~~~L~~~------~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~~~~kL~DfG~~~~  217 (353)
T PLN00034        147 IQVLLEFMDGGSLEGT------HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLIN---SAKNVKIADFGVSRI  217 (353)
T ss_pred             EEEEEecCCCCccccc------ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc---CCCCEEEccccccee
Confidence            4689999999998642      2467888899999999999999999999999999999998   578999999999987


Q ss_pred             ccCCC-cccccccCCcccccccccC-----C-CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCC
Q 014171          119 IKPGK-KFQDIVGSAYYVAPEVLKR-----K-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW  191 (429)
Q Consensus       119 ~~~~~-~~~~~~g~~~y~aPE~~~~-----~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  191 (429)
                      ..... ......|+..|+|||.+..     . .+.++|||||||++|+|++|+.||...........+............
T Consensus       218 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  297 (353)
T PLN00034        218 LAQTMDPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAICMSQPPEAP  297 (353)
T ss_pred             cccccccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHHhccCCCCCC
Confidence            64332 2244578999999998743     2 256899999999999999999999744333222222111111222233


Q ss_pred             CCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCC
Q 014171          192 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA  231 (429)
Q Consensus       192 ~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~  231 (429)
                      ..++.++++||.+||+.||.+|||+.++++||||......
T Consensus       298 ~~~~~~l~~li~~~l~~~P~~Rpt~~ell~hp~~~~~~~~  337 (353)
T PLN00034        298 ATASREFRHFISCCLQREPAKRWSAMQLLQHPFILRAQPG  337 (353)
T ss_pred             CccCHHHHHHHHHHccCChhhCcCHHHHhcCcccccCCcc
Confidence            4678999999999999999999999999999999987543

>PHA02988 hypothetical protein; Provisional

Probab=100.00  E-value=3.7e-33  Score=261.91  Aligned_cols=198  Identities=16%  Similarity=0.194  Sum_probs=158.4

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-C
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-H   85 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~-~   85 (429)
                      ..++|+|++++++++....  .      .....++|||||.||+|.+++.+.  +.+++.....++.|++.||.|||+ .
T Consensus        73 ~~l~h~nIv~~~g~~~~~~--~------~~~~~~lv~Ey~~~g~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~  142 (283)
T PHA02988         73 RRIDSNNILKIYGFIIDIV--D------DLPRLSLILEYCTRGYLREVLDKE--KDLSFKTKLDMAIDCCKGLYNLYKYT  142 (283)
T ss_pred             HhcCCCCEEEEeeeEEecc--c------CCCceEEEEEeCCCCcHHHHHhhC--CCCChhHHHHHHHHHHHHHHHHHhcC
Confidence            4455666666555443210  0      012346899999999999999654  578999999999999999999998 4


Q ss_pred             CCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccC---CCCCCcchHHHHHHHHHHhh
Q 014171           86 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLC  162 (429)
Q Consensus        86 ~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~DiwslG~il~~l~~  162 (429)
                      +++||||||+||+++   .++.+||+|||++.......  ....|++.|+|||++.+   .++.++||||+||++|+|++
T Consensus       143 ~~~Hrdlkp~nill~---~~~~~kl~dfg~~~~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~  217 (283)
T PHA02988        143 NKPYKNLTSVSFLVT---ENYKLKIICHGLEKILSSPP--FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFT  217 (283)
T ss_pred             CCCCCcCChhhEEEC---CCCcEEEcccchHhhhcccc--ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHH
Confidence            999999999999999   57899999999987654322  23467899999999864   56899999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       163 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      |+.||.+.+..+....+.......+.  ....+..+++++.+||+.||.+|||++++++
T Consensus       218 g~~Pf~~~~~~~~~~~i~~~~~~~~~--~~~~~~~l~~li~~cl~~dp~~Rps~~ell~  274 (283)
T PHA02988        218 GKIPFENLTTKEIYDLIINKNNSLKL--PLDCPLEIKCIVEACTSHDSIKRPNIKEILY  274 (283)
T ss_pred             CCCCCCCCCHHHHHHHHHhcCCCCCC--CCcCcHHHHHHHHHHhcCCcccCcCHHHHHH
Confidence            99999988887777777655443332  2357899999999999999999999999973

>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]

Probab=100.00  E-value=2.5e-34  Score=272.44  Aligned_cols=202  Identities=25%  Similarity=0.346  Sum_probs=164.9

Q ss_pred             ccccccccccccccccCCCCCC-cceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 014171            8 DTRSANCLDMVNLVTPMLPPTR-PMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG   86 (429)
Q Consensus         8 ~~~~~n~~~~~~~~~~~~~~~~-~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~   86 (429)
                      +++|...++|.||+.+.+.+.- +++       |||||||..|.|.+.|...  ..++......+.++|+.|+.|||.+.
T Consensus       162 dIKHLRkLkH~NII~FkGVCtqsPcy-------CIiMEfCa~GqL~~VLka~--~~itp~llv~Wsk~IA~GM~YLH~hK  232 (904)
T KOG4721|consen  162 DIKHLRKLKHPNIITFKGVCTQSPCY-------CIIMEFCAQGQLYEVLKAG--RPITPSLLVDWSKGIAGGMNYLHLHK  232 (904)
T ss_pred             hHHHHHhccCcceeeEeeeecCCcee-------EEeeeccccccHHHHHhcc--CccCHHHHHHHHHHhhhhhHHHHHhh
Confidence            3456666666666666443322 222       4699999999999999544  68999999999999999999999999


Q ss_pred             CeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCC
Q 014171           87 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRR  165 (429)
Q Consensus        87 i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~  165 (429)
                      |||||||.-|||++   .+..|||+|||-++........-.++||..|||||++.. +.+.|+|||||||+||||+||..
T Consensus       233 IIHRDLKSPNiLIs---~~d~VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~Ei  309 (904)
T KOG4721|consen  233 IIHRDLKSPNILIS---YDDVVKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEI  309 (904)
T ss_pred             HhhhccCCCceEee---ccceEEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCC
Confidence            99999999999999   578999999999988876666677899999999999975 55999999999999999999999


Q ss_pred             CCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCC
Q 014171          166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP  223 (429)
Q Consensus       166 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~  223 (429)
                      ||.+-....++.-+-.+...+  +.+..+++-++-||+.||+..|..||++.+++.|-
T Consensus       310 PYkdVdssAIIwGVGsNsL~L--pvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~Hl  365 (904)
T KOG4721|consen  310 PYKDVDSSAIIWGVGSNSLHL--PVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHL  365 (904)
T ss_pred             CccccchheeEEeccCCcccc--cCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHH
Confidence            997665544443333333322  23356788899999999999999999999999984

>PHA03212 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=5.1e-33  Score=272.04  Aligned_cols=187  Identities=24%  Similarity=0.347  Sum_probs=144.1

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..++|+|++. |+|..++...  ..+++..+..++.||+.||.|||++||+||||||+||+++   ..+.+||+|||+|.
T Consensus       157 ~~~lv~e~~~-~~L~~~l~~~--~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~---~~~~vkL~DFG~a~  230 (391)
T PHA03212        157 FTCLILPRYK-TDLYCYLAAK--RNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFIN---HPGDVCLGDFGAAC  230 (391)
T ss_pred             eeEEEEecCC-CCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEc---CCCCEEEEeCCccc
Confidence            3567999995 7898888554  5789999999999999999999999999999999999998   57889999999986


Q ss_pred             eccCC--CcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCCh-------hHHHHHHHhcC----
Q 014171          118 FIKPG--KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE-------DGIFKEVLRNK----  183 (429)
Q Consensus       118 ~~~~~--~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~-------~~~~~~i~~~~----  183 (429)
                      .....  .......||+.|+|||++.+ .++.++||||+||++|+|++|+.||.....       ...+..+....    
T Consensus       231 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p  310 (391)
T PHA03212        231 FPVDINANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHP  310 (391)
T ss_pred             ccccccccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCCh
Confidence            53221  22334579999999999864 568899999999999999999988764321       11111111100    


Q ss_pred             ----------------------CCC--CCCCC---CCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          184 ----------------------PDF--RRKPW---PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       184 ----------------------~~~--~~~~~---~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                                            ...  ..+.|   ..++.++.+||.+||+.||.+|||++|+|+||||+....
T Consensus       311 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~hp~f~~~~~  384 (391)
T PHA03212        311 NEFPIDAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDFAAFQDIPD  384 (391)
T ss_pred             hhcCcchhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcChhhccCCC
Confidence                                  000  00011   134668999999999999999999999999999988643

>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=4.2e-34  Score=274.82  Aligned_cols=185  Identities=34%  Similarity=0.579  Sum_probs=170.1

Q ss_pred             cccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           36 PLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        36 ~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      +...|+||||+.||.+++++.++  +.+.+..++.++.|+++|++|||+++|+|||||.+||+++   .+..+||+|||+
T Consensus       127 ~~~lylV~eya~~ge~~~yl~~~--gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~---~~mnikIaDfgf  201 (596)
T KOG0586|consen  127 EATLYLVMEYASGGELFDYLVKH--GRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLD---ENMNIKIADFGF  201 (596)
T ss_pred             cceeEEEEEeccCchhHHHHHhc--ccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccc---cccceeeecccc
Confidence            44556899999999999999666  7899999999999999999999999999999999999999   477799999999


Q ss_pred             ceeccCCCcccccccCCcccccccccCC-C-CCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          116 SDFIKPGKKFQDIVGSAYYVAPEVLKRK-S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       116 a~~~~~~~~~~~~~g~~~y~aPE~~~~~-~-~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      +..+.......+.+|++.|.|||++.+. + ++.+|+||+|+++|.|+.|..||.+.+-.+...+++.+.+.++.    .
T Consensus       202 S~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr~rvl~gk~rIp~----~  277 (596)
T KOG0586|consen  202 STFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELRPRVLRGKYRIPF----Y  277 (596)
T ss_pred             ceeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccccchheeeeecccc----e
Confidence            9999988888899999999999999864 3 88999999999999999999999999999999999988887765    4


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      ++-+++++|.++|..+|.+|++.+++..|.|.....
T Consensus       278 ms~dce~lLrk~lvl~Pskr~~~dqim~~~W~n~~~  313 (596)
T KOG0586|consen  278 MSCDCEDLLRKFLVLNPSKRGPCDQIMKDRWRNDLL  313 (596)
T ss_pred             eechhHHHHHHhhccCccccCCHHHhhhhcccchhh
Confidence            799999999999999999999999999999988654

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=100.00  E-value=6.8e-33  Score=259.89  Aligned_cols=182  Identities=29%  Similarity=0.476  Sum_probs=149.5

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|||||.+|+|.+++...+...+++..+..++.||+.||.|||+.||+|+||+|+||+++   .++.++|+|||.+..
T Consensus        94 ~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~---~~~~~~l~dfg~~~~  170 (282)
T cd06636          94 LWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLT---ENAEVKLVDFGVSAQ  170 (282)
T ss_pred             EEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEeeCcchhh
Confidence            46899999999999999776667799999999999999999999999999999999999998   578899999999876


Q ss_pred             ccCC-CcccccccCCccccccccc------CCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCC
Q 014171          119 IKPG-KKFQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW  191 (429)
Q Consensus       119 ~~~~-~~~~~~~g~~~y~aPE~~~------~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  191 (429)
                      .... .......|++.|+|||.+.      ..++.++|+||+||++|+|++|..||...........+.....  +....
T Consensus       171 ~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~  248 (282)
T cd06636         171 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFLIPRNPP--PKLKS  248 (282)
T ss_pred             hhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhhHhhCCC--CCCcc
Confidence            5422 2234457889999999874      2357789999999999999999999976655444433332221  11222


Q ss_pred             CCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          192 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       192 ~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                      ..++.++.++|.+||+.||.+||++.++++||||
T Consensus       249 ~~~~~~~~~li~~cl~~~p~~Rp~~~ell~~~~~  282 (282)
T cd06636         249 KKWSKKFIDFIEGCLVKNYLSRPSTEQLLKHPFI  282 (282)
T ss_pred             cccCHHHHHHHHHHhCCChhhCcCHHHHhcCCCC
Confidence            3578999999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=100.00  E-value=4.7e-33  Score=268.56  Aligned_cols=209  Identities=25%  Similarity=0.430  Sum_probs=157.2

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG   86 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~   86 (429)
                      +.++|+|++.+.+++.......      .....|++++++ |++|.+++.   ...+++..+..++.||+.||.|||++|
T Consensus        69 ~~l~h~~iv~~~~~~~~~~~~~------~~~~~~~~~~~~-~~~l~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~  138 (343)
T cd07878          69 KHMKHENVIGLLDVFTPATSIE------NFNEVYLVTNLM-GADLNNIVK---CQKLSDEHVQFLIYQLLRGLKYIHSAG  138 (343)
T ss_pred             HhcCCCchhhhhhhhccccccc------ccCcEEEEeecC-CCCHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            3445666655555443211111      112346789988 788887663   247999999999999999999999999


Q ss_pred             CeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCC
Q 014171           87 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGR  164 (429)
Q Consensus        87 i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~  164 (429)
                      |+||||||+||+++   .++.+||+|||++......  .....|++.|+|||++.+  .++.++||||+||++|+|++|+
T Consensus       139 ivHrdikp~Nil~~---~~~~~kl~Dfg~~~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~  213 (343)
T cd07878         139 IIHRDLKPSNVAVN---EDCELRILDFGLARQADDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGK  213 (343)
T ss_pred             eecccCChhhEEEC---CCCCEEEcCCccceecCCC--cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCC
Confidence            99999999999998   5788999999999866432  234578999999999865  4588999999999999999999


Q ss_pred             CCCCCCChhHHHHHHHhcC-----------------------CCCCCC----CCCCCCHHHHHHHHHhccCCccCcCCHH
Q 014171          165 RPFWDKTEDGIFKEVLRNK-----------------------PDFRRK----PWPSISNSAKDFVKKLLVKDPRARLTAA  217 (429)
Q Consensus       165 ~pf~~~~~~~~~~~i~~~~-----------------------~~~~~~----~~~~~~~~~~~li~~~l~~dp~~R~s~~  217 (429)
                      .||.+.........+....                       ...+..    .+...++.+.+||.+||+.||.+|||+.
T Consensus       214 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~  293 (343)
T cd07878         214 ALFPGNDYIDQLKRIMEVVGTPSPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISAS  293 (343)
T ss_pred             CCCCCCCHHHHHHHHHHHhCCCCHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHH
Confidence            9998766544443332211                       001110    1124567789999999999999999999


Q ss_pred             HHhCCCccccCCC
Q 014171          218 QALSHPWVREGGD  230 (429)
Q Consensus       218 e~l~h~~~~~~~~  230 (429)
                      ++++||||.....
T Consensus       294 ell~hp~~~~~~~  306 (343)
T cd07878         294 EALAHPYFSQYHD  306 (343)
T ss_pred             HHhcCcchhccCC
Confidence            9999999987543

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=100.00  E-value=9.5e-33  Score=256.95  Aligned_cols=182  Identities=26%  Similarity=0.482  Sum_probs=148.3

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCC-CEEEeecccc
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS-SLKATDFGLS  116 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~-~~kL~Dfg~a  116 (429)
                      ..|+||||++||+|.+++...  ..+++.++..++.|++.||.|||+.|++||||+|+||+++.   .+ .++|+|||.+
T Consensus        83 ~~~iv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~---~~~~~~l~dfg~~  157 (267)
T PHA03390         83 GHVLIMDYIKDGDLFDLLKKE--GKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDR---AKDRIYLCDYGLC  157 (267)
T ss_pred             eeEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeC---CCCeEEEecCccc
Confidence            457899999999999998654  48999999999999999999999999999999999999984   44 8999999998


Q ss_pred             eeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          117 DFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       117 ~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      ......   ....++..|+|||++.+ .++.++|+||+|+++|+|++|+.||.......................++.++
T Consensus       158 ~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (267)
T PHA03390        158 KIIGTP---SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQQKKLPFIKNVS  234 (267)
T ss_pred             eecCCC---ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhhcccCCcccccC
Confidence            766432   23467899999999864 45889999999999999999999997655443221111111122223345689


Q ss_pred             HHHHHHHHHhccCCccCcCC-HHHHhCCCcccc
Q 014171          196 NSAKDFVKKLLVKDPRARLT-AAQALSHPWVRE  227 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s-~~e~l~h~~~~~  227 (429)
                      +.+.++|.+||+.+|.+||+ ++++++||||++
T Consensus       235 ~~~~~li~~~l~~~p~~R~~~~~~~l~h~~~~~  267 (267)
T PHA03390        235 KNANDFVQSMLKYNINYRLTNYNEIIKHPFLKI  267 (267)
T ss_pred             HHHHHHHHHHhccChhhCCchHHHHhcCCcccC
Confidence            99999999999999999996 699999999974

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=100.00  E-value=5.2e-33  Score=265.23  Aligned_cols=186  Identities=26%  Similarity=0.365  Sum_probs=140.2

Q ss_pred             ceeEeeecCCCChHHHHHhh-------cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeec-CCCCCEEE
Q 014171           39 KLRRIRLCEGGELLDRILAK-------KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA-KEDSSLKA  110 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~-------~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~-~~~~~~kL  110 (429)
                      .|+|+||+. ++|.+++...       +...+++..++.++.||+.||.|||++||+||||||+|||+... ...+.+||
T Consensus        75 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl  153 (317)
T cd07868          75 VWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKI  153 (317)
T ss_pred             EEEEEeccC-CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEE
Confidence            467999996 5888877532       12358999999999999999999999999999999999999642 24678999


Q ss_pred             eecccceeccCCC----cccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChh---------HH
Q 014171          111 TDFGLSDFIKPGK----KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTED---------GI  175 (429)
Q Consensus       111 ~Dfg~a~~~~~~~----~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~---------~~  175 (429)
                      +|||+|.......    ......||+.|+|||++.+  .++.++|+||+||++|+|++|++||.+....         ..
T Consensus       154 ~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~  233 (317)
T cd07868         154 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQ  233 (317)
T ss_pred             eecCceeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHH
Confidence            9999998664322    2235678999999998864  3688999999999999999999999654321         11


Q ss_pred             HHHHHhcCCC---------------------CC-------------CCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          176 FKEVLRNKPD---------------------FR-------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       176 ~~~i~~~~~~---------------------~~-------------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ...+......                     +.             .......+..+.+||.+||+.||.+|||++|+|+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~t~~e~l~  313 (317)
T cd07868         234 LDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ  313 (317)
T ss_pred             HHHHHHhcCCCChHHhHHHhhccchhhhhhhhhccccCcccccchHHhcCCCCChHHHHHHHHHhccCcccCCCHHHHhc
Confidence            1111110000                     00             0001123567889999999999999999999999


Q ss_pred             CCcc
Q 014171          222 HPWV  225 (429)
Q Consensus       222 h~~~  225 (429)
                      ||||
T Consensus       314 hp~f  317 (317)
T cd07868         314 DPYF  317 (317)
T ss_pred             CCCC
Confidence            9998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>PTZ00284 protein kinase; Provisional

Probab=100.00  E-value=2.3e-33  Score=281.55  Aligned_cols=187  Identities=24%  Similarity=0.294  Sum_probs=145.0

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEeecCC-------------
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKE-------------  104 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~-~~i~H~dikp~Nil~~~~~~-------------  104 (429)
                      .|+|||++ ||+|.+++.+.  +.+++..+..++.||+.||.|||+ .||+||||||+|||++..+.             
T Consensus       207 ~~iv~~~~-g~~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~  283 (467)
T PTZ00284        207 MCIVMPKY-GPCLLDWIMKH--GPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPD  283 (467)
T ss_pred             EEEEEecc-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCC
Confidence            46788888 78999988654  689999999999999999999998 59999999999999985221             


Q ss_pred             CCCEEEeecccceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcC
Q 014171          105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK  183 (429)
Q Consensus       105 ~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~  183 (429)
                      ...+||+|||.+....  ......+||+.|+|||++.+ .++.++||||+||++|+|++|++||.+.+..+....+....
T Consensus       284 ~~~vkl~DfG~~~~~~--~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~  361 (467)
T PTZ00284        284 PCRVRICDLGGCCDER--HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTL  361 (467)
T ss_pred             CceEEECCCCccccCc--cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHc
Confidence            1259999999875432  22345689999999999875 46889999999999999999999998776655443332211


Q ss_pred             CCCCC---------------------------C---------CCC--CCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          184 PDFRR---------------------------K---------PWP--SISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       184 ~~~~~---------------------------~---------~~~--~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                      ..++.                           .         .+.  ..++.+.+||.+||+.||.+|||++|+|+||||
T Consensus       362 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ta~e~L~Hp~~  441 (467)
T PTZ00284        362 GRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRLNARQMTTHPYV  441 (467)
T ss_pred             CCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCCCHHHHhcCccc
Confidence            11000                           0         000  013557899999999999999999999999999


Q ss_pred             ccCCC
Q 014171          226 REGGD  230 (429)
Q Consensus       226 ~~~~~  230 (429)
                      +....
T Consensus       442 ~~~~~  446 (467)
T PTZ00284        442 LKYYP  446 (467)
T ss_pred             cccCC
Confidence            98654

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=100.00  E-value=4.7e-33  Score=264.61  Aligned_cols=188  Identities=24%  Similarity=0.428  Sum_probs=150.2

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+||||+. ++|.+++... +..+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||.+
T Consensus        77 ~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~---~~~~~kl~Dfg~~  151 (309)
T cd07872          77 KSLTLVFEYLD-KDLKQYMDDC-GNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLIN---ERGELKLADFGLA  151 (309)
T ss_pred             CeEEEEEeCCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEECccccc
Confidence            34578999998 5888877554 35689999999999999999999999999999999999998   4788999999998


Q ss_pred             eeccCCC-cccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCC---------
Q 014171          117 DFIKPGK-KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP---------  184 (429)
Q Consensus       117 ~~~~~~~-~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~---------  184 (429)
                      ....... ......+++.|+|||.+.+  .++.++|+||+||++|+|++|+.||.+.+..+....+.....         
T Consensus       152 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (309)
T cd07872         152 RAKSVPTKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPG  231 (309)
T ss_pred             eecCCCccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhh
Confidence            7654322 2234567899999998854  458899999999999999999999988776555444332110         


Q ss_pred             ----------CCCC-------CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          185 ----------DFRR-------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       185 ----------~~~~-------~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                                .++.       ...+.++.++++||.+||+.||.+|||++++++||||+...
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~  293 (309)
T cd07872         232 ISSNDEFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKHAYFRSLG  293 (309)
T ss_pred             hcchhhhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcChhhhhcc
Confidence                      0000       11235788999999999999999999999999999999764

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=100.00  E-value=1.7e-32  Score=253.50  Aligned_cols=181  Identities=21%  Similarity=0.416  Sum_probs=153.5

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|+|||++|+|.+++...+...+++.++..++.|++.||.|||++|++|+||+|+||+++   .++.++|+|||++..
T Consensus        75 ~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~---~~~~~~l~df~~~~~  151 (257)
T cd08223          75 LYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLT---RTNIIKVGDLGIARV  151 (257)
T ss_pred             EEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEe---cCCcEEEecccceEE
Confidence            46899999999999999776666799999999999999999999999999999999999998   578999999999876


Q ss_pred             ccCCC-cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCH
Q 014171          119 IKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN  196 (429)
Q Consensus       119 ~~~~~-~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  196 (429)
                      ..... ......+++.|+|||++.+ .++.++|+||+|+++++|++|+.||...+.......+..+...   .....+++
T Consensus       152 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~  228 (257)
T cd08223         152 LENQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDMNSLVYRIIEGKLP---PMPKDYSP  228 (257)
T ss_pred             ecccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCC---CCccccCH
Confidence            64322 2234567899999999865 4578999999999999999999999877766655555554321   22246789


Q ss_pred             HHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          197 SAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       197 ~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                      .+.+++.+||+.+|.+||++.++++||||
T Consensus       229 ~~~~li~~~l~~~p~~Rp~~~~~l~~~~~  257 (257)
T cd08223         229 ELGELIATMLSKRPEKRPSVKSILRQPYI  257 (257)
T ss_pred             HHHHHHHHHhccCcccCCCHHHHhcCCCC
Confidence            99999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=4.8e-33  Score=267.05  Aligned_cols=188  Identities=27%  Similarity=0.489  Sum_probs=153.8

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||.||+|.+++.+. ...+++..++.++.||+.||.|||++||+||||||+||+++   .++.+||+|||++
T Consensus        74 ~~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~---~~~~~kl~Dfg~~  149 (331)
T cd05597          74 NNLYLVMDYYVGGDLLTLLSKF-EDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLD---KNGHIRLADFGSC  149 (331)
T ss_pred             CeEEEEEecCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEEC---CCCCEEEEECCce
Confidence            3457899999999999988543 35799999999999999999999999999999999999998   5789999999998


Q ss_pred             eeccCCCcc--cccccCCccccccccc------CCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCC-
Q 014171          117 DFIKPGKKF--QDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR-  187 (429)
Q Consensus       117 ~~~~~~~~~--~~~~g~~~y~aPE~~~------~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~-  187 (429)
                      .........  ....||+.|+|||++.      +.++.++||||+||++|+|++|+.||.+.+..+....+......+. 
T Consensus       150 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~~~~~~~~  229 (331)
T cd05597         150 LRLLADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKEHFQF  229 (331)
T ss_pred             eecCCCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHcCCCcccC
Confidence            766443322  2346899999999985      2357789999999999999999999988887777777765443222 


Q ss_pred             CCCCCCCCHHHHHHHHHhccCCccC--cCCHHHHhCCCccccC
Q 014171          188 RKPWPSISNSAKDFVKKLLVKDPRA--RLTAAQALSHPWVREG  228 (429)
Q Consensus       188 ~~~~~~~~~~~~~li~~~l~~dp~~--R~s~~e~l~h~~~~~~  228 (429)
                      +...+.++..++++|.+||+.++.+  |++++++++||||+..
T Consensus       230 ~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~hp~~~~~  272 (331)
T cd05597         230 PPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDHPFFEGI  272 (331)
T ss_pred             CCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcCCCCCCC
Confidence            1223457999999999999765444  7899999999999764

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=100.00  E-value=2.1e-32  Score=252.55  Aligned_cols=182  Identities=24%  Similarity=0.395  Sum_probs=154.6

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+||||++|++|.+++.......+++..+..++.|++.||.|||++|++|+||+|+||+++   .++.++|+|||++.
T Consensus        73 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~---~~~~~~l~df~~~~  149 (256)
T cd08529          73 KLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLD---AYDNVKIGDLGVAK  149 (256)
T ss_pred             EEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEe---CCCCEEEcccccce
Confidence            457899999999999999776567899999999999999999999999999999999999999   47889999999988


Q ss_pred             eccCCCc-ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~~~~~-~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      ....... .....|++.|+|||++.+ .++.++|+||+||++|+|++|+.||...+.......+..+....   ....++
T Consensus       150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~  226 (256)
T cd08529         150 LLSDNTNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQGALILKIIRGVFPP---VSQMYS  226 (256)
T ss_pred             eccCccchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCC---CccccC
Confidence            7654332 234568889999998864 45889999999999999999999998887766666665544321   112578


Q ss_pred             HHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          196 NSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                      ..+.+++.+||+.+|++||++.++++|||+
T Consensus       227 ~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  256 (256)
T cd08529         227 QQLAQLIDQCLTKDYRQRPDTFQLLRNPSL  256 (256)
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHhhCCCC
Confidence            999999999999999999999999999995

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]

Probab=100.00  E-value=1.7e-33  Score=271.02  Aligned_cols=209  Identities=20%  Similarity=0.327  Sum_probs=171.8

Q ss_pred             ccccccccccccccccCCCCCCc--ceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014171            8 DTRSANCLDMVNLVTPMLPPTRP--MEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH   85 (429)
Q Consensus         8 ~~~~~n~~~~~~~~~~~~~~~~~--~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~   85 (429)
                      +++....++|.||+..|..+...  .+++      +|+|++..|+|..|+.+.  +..+...++.|++||+.||.|||++
T Consensus        91 Ev~lLKsL~H~NIirfy~SW~d~~n~~in------~iTEL~TSGtLr~Y~kk~--~~vn~kaik~W~RQILkGL~yLHs~  162 (632)
T KOG0584|consen   91 EVHLLKSLKHPNIIRFYDSWVDTDNKTIN------FITELFTSGTLREYRKKH--RRVNIKAIKSWCRQILKGLVYLHSQ  162 (632)
T ss_pred             HHHHHccCCCCceeeeeeheecCCCceee------eeeecccCCcHHHHHHHh--ccCCHHHHHHHHHHHHHHhhhhhcC
Confidence            33334444555555554444333  3355      589999999999999777  6899999999999999999999999


Q ss_pred             C--CeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccCCCCCCcchHHHHHHHHHHhhC
Q 014171           86 G--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCG  163 (429)
Q Consensus        86 ~--i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~DiwslG~il~~l~~g  163 (429)
                      .  |+|||||-+||+++.  +.|.|||+|+|+|........ ...+|||.|||||+....|+..+||||||+++.||+|+
T Consensus       163 ~PPIIHRDLKCDNIFinG--~~G~VKIGDLGLAtl~r~s~a-ksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~  239 (632)
T KOG0584|consen  163 DPPIIHRDLKCDNIFVNG--NLGEVKIGDLGLATLLRKSHA-KSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTS  239 (632)
T ss_pred             CCCccccccccceEEEcC--CcCceeecchhHHHHhhcccc-ceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhc
Confidence            7  999999999999995  789999999999987654433 45899999999999999999999999999999999999


Q ss_pred             CCCCCC-CChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          164 RRPFWD-KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       164 ~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                      ..||.. .+...+++++..+...-...  .--.+++++||.+||.. .+.|+|+.|+|+||||.....
T Consensus       240 eYPYsEC~n~AQIYKKV~SGiKP~sl~--kV~dPevr~fIekCl~~-~~~R~sa~eLL~d~Ff~~d~g  304 (632)
T KOG0584|consen  240 EYPYSECTNPAQIYKKVTSGIKPAALS--KVKDPEVREFIEKCLAT-KSERLSAKELLKDPFFDEDGG  304 (632)
T ss_pred             cCChhhhCCHHHHHHHHHcCCCHHHhh--ccCCHHHHHHHHHHhcC-chhccCHHHHhhChhhccccc
Confidence            999965 46778899999887432111  11268899999999999 999999999999999998644

>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1e-33  Score=262.22  Aligned_cols=186  Identities=28%  Similarity=0.481  Sum_probs=162.4

Q ss_pred             cccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           36 PLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        36 ~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      +..-++|+..|+||+|.-.|.+..+..+++..++.++.+|+.||++||+.+||+||+||+|||++   +.|++.|+|+|+
T Consensus       257 kd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLD---d~GhvRISDLGL  333 (591)
T KOG0986|consen  257 KDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLD---DHGHVRISDLGL  333 (591)
T ss_pred             CCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeec---cCCCeEeeccce
Confidence            34458999999999999888777667899999999999999999999999999999999999999   689999999999


Q ss_pred             ceeccCCCcccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhhCCCCCCCCChh----HHHHHHHhcCCCCCCCC
Q 014171          116 SDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTED----GIFKEVLRNKPDFRRKP  190 (429)
Q Consensus       116 a~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~----~~~~~i~~~~~~~~~~~  190 (429)
                      |..+..+......+||.+|||||++. +.|+...|+||+||++|+|+.|+.||....+.    ++-+++......++   
T Consensus       334 Avei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKvk~eEvdrr~~~~~~ey~---  410 (591)
T KOG0986|consen  334 AVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKVKREEVDRRTLEDPEEYS---  410 (591)
T ss_pred             EEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhhhHHHHHHHHhcchhhcc---
Confidence            99999888888889999999999996 45799999999999999999999999765443    33334444443333   


Q ss_pred             CCCCCHHHHHHHHHhccCCccCcC-----CHHHHhCCCccccC
Q 014171          191 WPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG  228 (429)
Q Consensus       191 ~~~~~~~~~~li~~~l~~dp~~R~-----s~~e~l~h~~~~~~  228 (429)
                       ...|++++++.+.+|..||.+|.     +++++-+||||+..
T Consensus       411 -~kFS~eakslc~~LL~Kdp~~RLGcrg~ga~evk~HpfFk~l  452 (591)
T KOG0986|consen  411 -DKFSEEAKSLCEGLLTKDPEKRLGCRGEGAQEVKEHPFFKDL  452 (591)
T ss_pred             -cccCHHHHHHHHHHHccCHHHhccCCCcCcchhhhCcccccC
Confidence             46899999999999999999997     57899999999985

>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=3.9e-33  Score=264.07  Aligned_cols=183  Identities=28%  Similarity=0.469  Sum_probs=143.8

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .||||||-+ -+|...|.+. ...++.-.++.++.|++.|+.++|.+||||.||||.|+|+.    .|.+||+|||+|..
T Consensus       435 lYmvmE~Gd-~DL~kiL~k~-~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLlV----kG~LKLIDFGIA~a  508 (677)
T KOG0596|consen  435 LYMVMECGD-IDLNKILKKK-KSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLLV----KGRLKLIDFGIANA  508 (677)
T ss_pred             EEEEeeccc-ccHHHHHHhc-cCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEEE----eeeEEeeeechhcc
Confidence            467999886 5888877544 34455458999999999999999999999999999999998    79999999999998


Q ss_pred             ccCCCc---ccccccCCcccccccccC------------CCCCCcchHHHHHHHHHHhhCCCCCCCCC-hhHHHHHHHhc
Q 014171          119 IKPGKK---FQDIVGSAYYVAPEVLKR------------KSGPESDVWSIGVITYILLCGRRPFWDKT-EDGIFKEVLRN  182 (429)
Q Consensus       119 ~~~~~~---~~~~~g~~~y~aPE~~~~------------~~~~~~DiwslG~il~~l~~g~~pf~~~~-~~~~~~~i~~~  182 (429)
                      +.....   ..+.+||+.|||||.+..            +.++++||||||||||+|+.|++||..-. ....+..|..-
T Consensus       509 I~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~~aKl~aI~~P  588 (677)
T KOG0596|consen  509 IQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQIAKLHAITDP  588 (677)
T ss_pred             cCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHHHHHHHhhcCC
Confidence            875543   356799999999999841            13678999999999999999999995432 22333344443


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          183 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      ...++.+..+. ..++.+++..||..||.+|||+.++|+|||+...
T Consensus       589 ~~~Iefp~~~~-~~~li~~mK~CL~rdPkkR~si~eLLqhpFl~~~  633 (677)
T KOG0596|consen  589 NHEIEFPDIPE-NDELIDVMKCCLARDPKKRWSIPELLQHPFLQIQ  633 (677)
T ss_pred             CccccccCCCC-chHHHHHHHHHHhcCcccCCCcHHHhcCcccccc
Confidence            33333332222 2348999999999999999999999999998763

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=100.00  E-value=8.1e-33  Score=265.48  Aligned_cols=188  Identities=26%  Similarity=0.456  Sum_probs=155.6

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||.||+|.+++.+. ...+++..+..++.|++.||+|||++||+||||||+||+++   .++.+||+|||++
T Consensus        74 ~~~~lv~Ey~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~---~~~~~kl~DfG~a  149 (331)
T cd05624          74 NYLYLVMDYYVGGDLLTLLSKF-EDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLD---MNGHIRLADFGSC  149 (331)
T ss_pred             CEEEEEEeCCCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEc---CCCCEEEEeccce
Confidence            3457899999999999999653 35799999999999999999999999999999999999998   5788999999999


Q ss_pred             eeccCCCcc--cccccCCcccccccccC------CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCC-
Q 014171          117 DFIKPGKKF--QDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR-  187 (429)
Q Consensus       117 ~~~~~~~~~--~~~~g~~~y~aPE~~~~------~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~-  187 (429)
                      .........  ....|++.|+|||++.+      .++.++|+||+||++|+|++|+.||.+.+..+....+......++ 
T Consensus       150 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~~~~~~~~  229 (331)
T cd05624         150 LKMNQDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQF  229 (331)
T ss_pred             eeccCCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHcCCCcccC
Confidence            776543322  23568999999999863      457899999999999999999999998887777777766543332 


Q ss_pred             CCCCCCCCHHHHHHHHHhccCCccC--cCCHHHHhCCCccccC
Q 014171          188 RKPWPSISNSAKDFVKKLLVKDPRA--RLTAAQALSHPWVREG  228 (429)
Q Consensus       188 ~~~~~~~~~~~~~li~~~l~~dp~~--R~s~~e~l~h~~~~~~  228 (429)
                      +..+..++++++++|.+||..++.+  |++++++++|+||+..
T Consensus       230 p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h~~f~~~  272 (331)
T cd05624         230 PSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKHAFFEGI  272 (331)
T ss_pred             CCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcCCCcCCC
Confidence            2223467899999999999876654  4689999999999864

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=100.00  E-value=1.1e-32  Score=264.21  Aligned_cols=189  Identities=21%  Similarity=0.255  Sum_probs=146.3

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||++|+|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++   .++.++++||+.+
T Consensus        72 ~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~---~~~~~~l~~~~~~  148 (327)
T cd08227          72 NELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILIS---VDGKVYLSGLRSN  148 (327)
T ss_pred             CEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEe---cCCcEEEcccchh
Confidence            3457899999999999999765556799999999999999999999999999999999999998   4778999999865


Q ss_pred             eeccCCCc--------ccccccCCcccccccccC---CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCC
Q 014171          117 DFIKPGKK--------FQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD  185 (429)
Q Consensus       117 ~~~~~~~~--------~~~~~g~~~y~aPE~~~~---~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~  185 (429)
                      ........        .....++..|+|||++.+   .++.++||||+||++|+|++|+.||..............+...
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  228 (327)
T cd08227         149 LSMINHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVP  228 (327)
T ss_pred             hccccccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCcc
Confidence            43321111        112345678999999864   4688999999999999999999999766544433332222110


Q ss_pred             CC------------------------------------------CCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCC
Q 014171          186 FR------------------------------------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP  223 (429)
Q Consensus       186 ~~------------------------------------------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~  223 (429)
                      ..                                          .+....+++.+.+||.+||+.||.+|||++++++||
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~p  308 (327)
T cd08227         229 CLLDTTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNHS  308 (327)
T ss_pred             ccccccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcCh
Confidence            00                                          000113467899999999999999999999999999


Q ss_pred             ccccC
Q 014171          224 WVREG  228 (429)
Q Consensus       224 ~~~~~  228 (429)
                      ||+..
T Consensus       309 ~f~~~  313 (327)
T cd08227         309 FFKQI  313 (327)
T ss_pred             hhhhc
Confidence            99864

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=2.1e-33  Score=250.21  Aligned_cols=184  Identities=32%  Similarity=0.571  Sum_probs=167.1

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      .+.|+||||..||.|.-.+.+.  ..+++..++.+...|+.||.|||+++||+||||.+|.+++   .+|++||.|||++
T Consensus       241 drlCFVMeyanGGeLf~HLsre--r~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLD---kDGHIKitDFGLC  315 (516)
T KOG0690|consen  241 DRLCFVMEYANGGELFFHLSRE--RVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLD---KDGHIKITDFGLC  315 (516)
T ss_pred             ceEEEEEEEccCceEeeehhhh--hcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheec---cCCceEeeecccc
Confidence            4457899999999998888554  6899999999999999999999999999999999999999   6899999999998


Q ss_pred             ee-ccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DF-IKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~-~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      +. +..+....+.+|||.|+|||++.. .|+.++|+|.+||++|+|++|+.||+..+.+.....|+.+...||.    .+
T Consensus       316 KE~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~ed~kFPr----~l  391 (516)
T KOG0690|consen  316 KEEIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILMEDLKFPR----TL  391 (516)
T ss_pred             hhcccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHhhhccCCc----cC
Confidence            75 445556788999999999999974 5799999999999999999999999999999999999998888876    58


Q ss_pred             CHHHHHHHHHhccCCccCcC-----CHHHHhCCCccccCC
Q 014171          195 SNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREGG  229 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~-----s~~e~l~h~~~~~~~  229 (429)
                      +++++.|+..+|..||.+|.     .+.|+.+|+||+...
T Consensus       392 s~eAktLLsGLL~kdP~kRLGgGpdDakEi~~h~FF~~v~  431 (516)
T KOG0690|consen  392 SPEAKTLLSGLLKKDPKKRLGGGPDDAKEIMRHRFFASVD  431 (516)
T ss_pred             CHHHHHHHHHHhhcChHhhcCCCchhHHHHHhhhhhccCC
Confidence            99999999999999999997     488999999999764

>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]

Probab=100.00  E-value=3.4e-33  Score=243.44  Aligned_cols=188  Identities=27%  Similarity=0.428  Sum_probs=159.1

Q ss_pred             cccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEeecCCCCCEEEeecc
Q 014171           36 PLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKATDFG  114 (429)
Q Consensus        36 ~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~-~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg  114 (429)
                      ....++.||.+.  ...+.|.++..+++||..+-.+..-++.||.||-+ +||+|||+||+|||++   +.|.+||||||
T Consensus       163 n~dV~IcMelMs--~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlD---e~GniKlCDFG  237 (391)
T KOG0983|consen  163 NTDVFICMELMS--TCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLD---ERGNIKLCDFG  237 (391)
T ss_pred             CchHHHHHHHHH--HHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEc---cCCCEEeeccc
Confidence            334456677773  55666666666889999999999999999999986 5899999999999999   68999999999


Q ss_pred             cceeccCCCcccccccCCccccccccc----CCCCCCcchHHHHHHHHHHhhCCCCCCCC-ChhHHHHHHHhcCCCCCCC
Q 014171          115 LSDFIKPGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDK-TEDGIFKEVLRNKPDFRRK  189 (429)
Q Consensus       115 ~a~~~~~~~~~~~~~g~~~y~aPE~~~----~~~~~~~DiwslG~il~~l~~g~~pf~~~-~~~~~~~~i~~~~~~~~~~  189 (429)
                      ++.++..........|.+.|||||.+.    ..|.-++||||||+++++|.||+.||.+. ++.+.+.++....+...+.
T Consensus       238 IsGrlvdSkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~ePP~L~~  317 (391)
T KOG0983|consen  238 ISGRLVDSKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNEEPPLLPG  317 (391)
T ss_pred             ccceeecccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhcCCCCCCc
Confidence            999988777777889999999999985    34678899999999999999999999875 5667778888766533222


Q ss_pred             CCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          190 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       190 ~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      . ...|+++++|+..||..|+.+||...++|+|||++.+.
T Consensus       318 ~-~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h~Fi~~ye  356 (391)
T KOG0983|consen  318 H-MGFSPDFQSFVKDCLTKDHRKRPKYNKLLEHPFIKRYE  356 (391)
T ss_pred             c-cCcCHHHHHHHHHHhhcCcccCcchHHHhcCcceeecc
Confidence            2 24899999999999999999999999999999998874

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.2e-32  Score=253.32  Aligned_cols=183  Identities=30%  Similarity=0.471  Sum_probs=157.1

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|+|||.||+|.+++...  +.+++..+..++.|++.||.|||+.|++|+||+|+||+++   .++.++|+|||++.
T Consensus        71 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~  145 (260)
T cd05611          71 YLYLVMEYLNGGDCASLIKTL--GGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLID---QTGHLKLTDFGLSR  145 (260)
T ss_pred             eEEEEEeccCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCcEEEeecccce
Confidence            357899999999999988554  5799999999999999999999999999999999999998   47889999999887


Q ss_pred             eccCCCcccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCH
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN  196 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  196 (429)
                      ....   .....+++.|+|||.+.+. ++.++|+||+|+++|+|++|..||...+.......+......++......++.
T Consensus       146 ~~~~---~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (260)
T cd05611         146 NGLE---NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILSRRINWPEEVKEFCSP  222 (260)
T ss_pred             eccc---cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccCCCCcccccCCH
Confidence            5433   2344678899999998654 48899999999999999999999988887777777766665555545556899


Q ss_pred             HHHHHHHHhccCCccCcCC---HHHHhCCCccccC
Q 014171          197 SAKDFVKKLLVKDPRARLT---AAQALSHPWVREG  228 (429)
Q Consensus       197 ~~~~li~~~l~~dp~~R~s---~~e~l~h~~~~~~  228 (429)
                      .+.+++.+||+.+|++||+   ++|++.||||+..
T Consensus       223 ~~~~~i~~~l~~~p~~R~~~~~~~~~l~~~~~~~~  257 (260)
T cd05611         223 EAVDLINRLLCMDPAKRLGANGYQEIKSHPFFKSI  257 (260)
T ss_pred             HHHHHHHHHccCCHHHccCCCcHHHHHcChHhhcC
Confidence            9999999999999999995   5799999999765

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]

Probab=100.00  E-value=3e-34  Score=269.72  Aligned_cols=207  Identities=31%  Similarity=0.536  Sum_probs=180.4

Q ss_pred             cccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCC
Q 014171           13 NCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM   92 (429)
Q Consensus        13 n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~di   92 (429)
                      ..++|++++..      ++.+-.+.+.++|||-+. |+.++.+.+...+++++.....++.||+.||.|||.+||+|+||
T Consensus       618 q~l~HPGiV~l------e~M~ET~ervFVVMEKl~-GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDL  690 (888)
T KOG4236|consen  618 QNLHHPGIVNL------ECMFETPERVFVVMEKLH-GDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDL  690 (888)
T ss_pred             HhcCCCCeeEE------EEeecCCceEEEEehhhc-chHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccC
Confidence            34455555443      223333556678999997 67777777766799999999999999999999999999999999


Q ss_pred             CCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhhCCCCCCCCC
Q 014171           93 KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKT  171 (429)
Q Consensus        93 kp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~  171 (429)
                      ||+|||+.+.+.-.++||||||+|+.+....-..+.+|||.|+|||++. +.|+..-|+||+||++|--+.|..||  +.
T Consensus       691 KPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPF--NE  768 (888)
T KOG4236|consen  691 KPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPF--NE  768 (888)
T ss_pred             CchheeeccCCCCCceeeccccceeecchhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccC--CC
Confidence            9999999987777899999999999998888888999999999999996 56788899999999999999999999  45


Q ss_pred             hhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          172 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       172 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      ++++...|.....-+++.+|..+++.+.+||..+|+...++|.|++..|.|||++++
T Consensus       769 dEdIndQIQNAaFMyPp~PW~eis~~AidlIn~LLqVkm~kRysvdk~lsh~Wlq~y  825 (888)
T KOG4236|consen  769 DEDINDQIQNAAFMYPPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSLSHPWLQDY  825 (888)
T ss_pred             ccchhHHhhccccccCCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhccchhhhcc
Confidence            566777888888889999999999999999999999999999999999999999886

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=100.00  E-value=1.6e-32  Score=259.89  Aligned_cols=187  Identities=24%  Similarity=0.404  Sum_probs=149.8

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+||||+. |+|.+++... ...+++..+..++.||+.||.|||++||+|+||||+||+++   .++.++|+|||++.
T Consensus        78 ~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~dfg~~~  152 (301)
T cd07873          78 SLTLVFEYLD-KDLKQYLDDC-GNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLIN---ERGELKLADFGLAR  152 (301)
T ss_pred             eEEEEEeccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEEC---CCCcEEECcCcchh
Confidence            3578999997 6898888654 35789999999999999999999999999999999999998   57889999999987


Q ss_pred             eccCCC-cccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCC------
Q 014171          118 FIKPGK-KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR------  188 (429)
Q Consensus       118 ~~~~~~-~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~------  188 (429)
                      ...... ......+++.|+|||.+.+  .++.++||||+||++|+|++|++||.+.+..+....+.........      
T Consensus       153 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (301)
T cd07873         153 AKSIPTKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGI  232 (301)
T ss_pred             ccCCCCCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhh
Confidence            643222 2233467889999998864  3577899999999999999999999887766555444332111000      


Q ss_pred             --------------------CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          189 --------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       189 --------------------~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                                          ...+.++..+++||.+||+.||.+|||++++++||||+...
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h~~f~~~~  293 (301)
T cd07873         233 LSNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKHPYFHCLG  293 (301)
T ss_pred             hccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence                                01135788999999999999999999999999999998754

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=100.00  E-value=7.9e-33  Score=267.44  Aligned_cols=176  Identities=32%  Similarity=0.505  Sum_probs=149.6

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||++.||-|.+.+...+  .+ ..++..|+.+|+.|+.|||++|++||||||+|||+.  +..++++|+|||.++
T Consensus       390 ~~~~v~e~l~g~ell~ri~~~~--~~-~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~--~~~g~lrltyFG~a~  464 (612)
T KOG0603|consen  390 EIYLVMELLDGGELLRRIRSKP--EF-CSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLD--GSAGHLRLTYFGFWS  464 (612)
T ss_pred             eeeeeehhccccHHHHHHHhcc--hh-HHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeec--CCCCcEEEEEechhh
Confidence            3468999999999999886652  33 378888999999999999999999999999999995  257899999999998


Q ss_pred             eccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChh-HHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      .....  +.+.+-|..|.|||++.. .++.++|+||+|++||+|++|+.||...... ++..++..+...      ..+|
T Consensus       465 ~~~~~--~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~ei~~~i~~~~~s------~~vS  536 (612)
T KOG0603|consen  465 ELERS--CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIEIHTRIQMPKFS------ECVS  536 (612)
T ss_pred             hCchh--hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHHHHHhhcCCccc------cccC
Confidence            77654  445567889999999974 5799999999999999999999999877666 445555444322      4689


Q ss_pred             HHHHHHHHHhccCCccCcCCHHHHhCCCccc
Q 014171          196 NSAKDFVKKLLVKDPRARLTAAQALSHPWVR  226 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~  226 (429)
                      ..+++||++||+.||.+|+++.+++.||||-
T Consensus       537 ~~AKdLl~~LL~~dP~~Rl~~~~i~~h~w~~  567 (612)
T KOG0603|consen  537 DEAKDLLQQLLQVDPALRLGADEIGAHPWFL  567 (612)
T ss_pred             HHHHHHHHHhccCChhhCcChhhhccCcchh
Confidence            9999999999999999999999999999993

>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=100.00  E-value=1.8e-33  Score=267.70  Aligned_cols=208  Identities=24%  Similarity=0.375  Sum_probs=172.6

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH   85 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~   85 (429)
                      +++.+..+.++|+|.+++.     - |..-...+|||||||- |+-.+++.-. .+++.+.++..|..+.+.||.|||+.
T Consensus        74 lKEVrFL~~l~HPntieYk-----g-CyLre~TaWLVMEYCl-GSAsDlleVh-kKplqEvEIAAi~~gaL~gLaYLHS~  145 (948)
T KOG0577|consen   74 LKEVRFLRQLRHPNTIEYK-----G-CYLREHTAWLVMEYCL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSH  145 (948)
T ss_pred             HHHHHHHHhccCCCccccc-----c-eeeccchHHHHHHHHh-ccHHHHHHHH-hccchHHHHHHHHHHHHHHHHHHHHh
Confidence            4566667777777777762     1 2222456789999998 6777766433 36899999999999999999999999


Q ss_pred             CCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCccccccccc----CCCCCCcchHHHHHHHHHHh
Q 014171           86 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILL  161 (429)
Q Consensus        86 ~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~----~~~~~~~DiwslG~il~~l~  161 (429)
                      +.||||||..|||++   +.+.|||+|||.|....+   .++++|||+|||||++.    |.|+-++||||+|+++.++.
T Consensus       146 ~~IHRDiKAGNILLs---e~g~VKLaDFGSAsi~~P---AnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELA  219 (948)
T KOG0577|consen  146 NRIHRDIKAGNILLS---EPGLVKLADFGSASIMAP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA  219 (948)
T ss_pred             hHHhhhccccceEec---CCCeeeeccccchhhcCc---hhcccCCccccchhHheeccccccCCccceeeccchhhhhh
Confidence            999999999999999   689999999999876653   35679999999999984    67899999999999999999


Q ss_pred             hCCCCCCCCChhHHHHHHHhcCC-CCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          162 CGRRPFWDKTEDGIFKEVLRNKP-DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       162 ~g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                      ..++|+...+.-..+..|..+.. .+...   ..|..++.|+..||+.-|.+|||++++|.|+|+.....
T Consensus       220 ERkPPlFnMNAMSALYHIAQNesPtLqs~---eWS~~F~~Fvd~CLqKipqeRptse~ll~H~fv~R~Rp  286 (948)
T KOG0577|consen  220 ERKPPLFNMNAMSALYHIAQNESPTLQSN---EWSDYFRNFVDSCLQKIPQERPTSEELLKHRFVLRERP  286 (948)
T ss_pred             hcCCCccCchHHHHHHHHHhcCCCCCCCc---hhHHHHHHHHHHHHhhCcccCCcHHHHhhcchhccCCC
Confidence            99999998888777776765543 33433   44889999999999999999999999999999887643

>PHA03209 serine/threonine kinase US3; Provisional

Probab=100.00  E-value=1.5e-32  Score=266.36  Aligned_cols=185  Identities=21%  Similarity=0.349  Sum_probs=141.4

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|+||+. |+|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++   ..+.++|+|||.+.
T Consensus       131 ~~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~---~~~~~kl~DfG~a~  205 (357)
T PHA03209        131 ITCMVLPHYS-SDLYTYLTKR-SRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFIN---DVDQVCIGDLGAAQ  205 (357)
T ss_pred             eeEEEEEccC-CcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEEecCcccc
Confidence            3468999996 6888888654 36799999999999999999999999999999999999998   57889999999987


Q ss_pred             eccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhH----------HHHHHHhc----
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDG----------IFKEVLRN----  182 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~----------~~~~i~~~----  182 (429)
                      ............||+.|+|||++.+ .++.++||||+||++|+|+++..|+.......          .+..+...    
T Consensus       206 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~  285 (357)
T PHA03209        206 FPVVAPAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVH  285 (357)
T ss_pred             ccccCcccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccC
Confidence            5443334445678999999999864 56889999999999999998665553322110          11111110    


Q ss_pred             CCCCCC--------------------------CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcccc
Q 014171          183 KPDFRR--------------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE  227 (429)
Q Consensus       183 ~~~~~~--------------------------~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~  227 (429)
                      ...++.                          .....++.++.+||.+||+.||.+|||+.|+|+||||+.
T Consensus       286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~hp~f~~  356 (357)
T PHA03209        286 PEEFPRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILNYPMFAQ  356 (357)
T ss_pred             hhhcCCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhcCchhcc
Confidence            000110                          001135667888999999999999999999999999975

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=100.00  E-value=1.6e-32  Score=257.11  Aligned_cols=186  Identities=25%  Similarity=0.363  Sum_probs=149.8

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+||||+.||+|.+++..+  +.+++..+..++.|++.||.|||++||+|+||||+||+++   .++.++|+|||++
T Consensus        70 ~~~~lv~e~~~~~~L~~~i~~~--~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~---~~~~~~l~dfg~~  144 (279)
T cd05633          70 DKLCFILDLMNGGDLHYHLSQH--GVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISDLGLA  144 (279)
T ss_pred             CeEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEEC---CCCCEEEccCCcc
Confidence            3467899999999999888654  6799999999999999999999999999999999999998   5788999999998


Q ss_pred             eeccCCCcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      ........ ....|++.|+|||.+.+  .++.++|+||+||++|+|++|..||......... .+...........++.+
T Consensus       145 ~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~-~~~~~~~~~~~~~~~~~  222 (279)
T cd05633         145 CDFSKKKP-HASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKH-EIDRMTLTVNVELPDSF  222 (279)
T ss_pred             eeccccCc-cCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHH-HHHHHhhcCCcCCcccc
Confidence            76543322 33468999999998853  3588999999999999999999999754322211 11111111222233467


Q ss_pred             CHHHHHHHHHhccCCccCcC-----CHHHHhCCCccccCC
Q 014171          195 SNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREGG  229 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~-----s~~e~l~h~~~~~~~  229 (429)
                      +.+++++|.+||+.||.+|+     +++++++||||+...
T Consensus       223 ~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h~~~~~~~  262 (279)
T cd05633         223 SPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEHVFFKGID  262 (279)
T ss_pred             CHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhCccccCCC
Confidence            89999999999999999999     699999999998854

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=100.00  E-value=1.8e-32  Score=263.23  Aligned_cols=184  Identities=24%  Similarity=0.384  Sum_probs=146.4

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~-~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ..|+|||||.||+|.+++.+.  +.+++..+..++.|++.||.|||+. +|+|+||||+||+++   .++.+||+|||++
T Consensus        77 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~---~~~~~kL~Dfg~~  151 (333)
T cd06650          77 EISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN---SRGEIKLCDFGVS  151 (333)
T ss_pred             EEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEc---CCCCEEEeeCCcc
Confidence            457899999999999998654  5789999999999999999999985 799999999999998   4778999999998


Q ss_pred             eeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHH----------------
Q 014171          117 DFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV----------------  179 (429)
Q Consensus       117 ~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i----------------  179 (429)
                      ...... ......|+..|+|||++.+ .++.++|+||+||++|+|++|+.||...........+                
T Consensus       152 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (333)
T cd06650         152 GQLIDS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPR  230 (333)
T ss_pred             hhhhhh-ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcc
Confidence            755322 2234578999999999875 4588999999999999999999999765443222111                


Q ss_pred             ----------------------------HhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          180 ----------------------------LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       180 ----------------------------~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                                                  .....  +......++.++++||.+||+.||.+|||+.++++||||+...
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h~~~~~~~  306 (333)
T cd06650         231 PRPPGRPLSSYGPDSRPPMAIFELLDYIVNEPP--PKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSE  306 (333)
T ss_pred             cCCccchhhhhcccccccccHHHHHHHHhcCCC--ccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhCHHHhcCc
Confidence                                        00000  0001123578899999999999999999999999999998753

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=100.00  E-value=2.8e-32  Score=253.64  Aligned_cols=182  Identities=29%  Similarity=0.438  Sum_probs=147.2

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||++|+|.+++...  +.+++.++..++.|++.||.|||++|++|+||||+||+++   ..+.++|+|||.+.
T Consensus        80 ~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~---~~~~~~l~dfg~~~  154 (267)
T cd06645          80 KLWICMEFCGGGSLQDIYHVT--GPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLT---DNGHVKLADFGVSA  154 (267)
T ss_pred             EEEEEEeccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEECcceeee
Confidence            457899999999999988544  6899999999999999999999999999999999999998   57889999999987


Q ss_pred             eccCCC-cccccccCCccccccccc----CCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCC-CCC
Q 014171          118 FIKPGK-KFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR-KPW  191 (429)
Q Consensus       118 ~~~~~~-~~~~~~g~~~y~aPE~~~----~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~-~~~  191 (429)
                      ...... ......|+..|+|||.+.    +.++.++|+||+||++|+|++|..||...................+. ...
T Consensus       155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (267)
T cd06645         155 QITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMTKSNFQPPKLKDK  234 (267)
T ss_pred             EccCcccccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhhHHhhhccCCCCCccccc
Confidence            654322 223457899999999873    34678999999999999999999999766544443333322222111 111


Q ss_pred             CCCCHHHHHHHHHhccCCccCcCCHHHHhCCCc
Q 014171          192 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW  224 (429)
Q Consensus       192 ~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~  224 (429)
                      ..++..++++|.+||..+|.+||+++++++|||
T Consensus       235 ~~~~~~~~~li~~~l~~~P~~R~~~~~ll~~~~  267 (267)
T cd06645         235 MKWSNSFHHFVKMALTKNPKKRPTAEKLLQHPF  267 (267)
T ss_pred             CCCCHHHHHHHHHHccCCchhCcCHHHHhcCCC
Confidence            246789999999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=100.00  E-value=4.7e-32  Score=254.25  Aligned_cols=187  Identities=29%  Similarity=0.443  Sum_probs=153.3

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|+||+.+|+|..++.+. ...+++..+..++.|++.||.|||+.|++||||||+||+++   .++.++|+|||++.
T Consensus        76 ~~~~v~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~---~~~~~kl~dfg~~~  151 (282)
T cd06643          76 NLWILIEFCAGGAVDAVMLEL-ERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFT---LDGDIKLADFGVSA  151 (282)
T ss_pred             EEEEEEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEc---cCCCEEEccccccc
Confidence            357899999999998877543 35799999999999999999999999999999999999998   57889999999987


Q ss_pred             eccCC-CcccccccCCcccccccccC------CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCC
Q 014171          118 FIKPG-KKFQDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP  190 (429)
Q Consensus       118 ~~~~~-~~~~~~~g~~~y~aPE~~~~------~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  190 (429)
                      ..... .......+++.|+|||++..      .++.++|+||+||++|+|++|++||...+.......+........ ..
T Consensus       152 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~  230 (282)
T cd06643         152 KNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPPTL-AQ  230 (282)
T ss_pred             cccccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhhcCCCCC-CC
Confidence            65332 22344568899999998742      346789999999999999999999988776666555554432211 12


Q ss_pred             CCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          191 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       191 ~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      ...++..++++|.+||+.+|.+||+++++++||||+...
T Consensus       231 ~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~  269 (282)
T cd06643         231 PSRWSSEFKDFLKKCLEKNVDARWTTTQLLQHPFVTVNS  269 (282)
T ss_pred             ccccCHHHHHHHHHHccCChhhCcCHHHHhcCCCEeccC
Confidence            235789999999999999999999999999999998753

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=100.00  E-value=2e-32  Score=256.10  Aligned_cols=189  Identities=29%  Similarity=0.434  Sum_probs=154.5

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+||||++||+|.+++.+.....+++..+..++.|++.||.|||++|++||||+|+||+++   .++.++|+|||.+
T Consensus        66 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~---~~~~~~l~dfg~~  142 (277)
T cd05577          66 DDLCLVMTLMNGGDLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLD---DHGNVRISDLGLA  142 (277)
T ss_pred             CeEEEEEecCCCCcHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC---CCCCEEEccCcch
Confidence            3457899999999999999776555799999999999999999999999999999999999998   5788999999998


Q ss_pred             eeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          117 DFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       117 ~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      .............++..|+|||.+.+ .++.++|+||+||++|+|++|+.||...........+.......+....+.++
T Consensus       143 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  222 (277)
T cd05577         143 VELKGGKKIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKEELKRRTLEMAVEYPDKFS  222 (277)
T ss_pred             hhhccCCccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHHHHHhccccccccCCccCC
Confidence            76654444445567889999999864 45789999999999999999999997665422222233222222333334679


Q ss_pred             HHHHHHHHHhccCCccCcC-----CHHHHhCCCccccC
Q 014171          196 NSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG  228 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~-----s~~e~l~h~~~~~~  228 (429)
                      +.++++|.+||+.+|.+||     ++.++++||||+..
T Consensus       223 ~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~h~~~~~~  260 (277)
T cd05577         223 PEAKDLCEALLQKDPEKRLGCRGGSADEVREHPLFKDL  260 (277)
T ss_pred             HHHHHHHHHHccCChhHccCCCcccHHHHHhChhhhcC
Confidence            9999999999999999999     89999999999764

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=1.5e-32  Score=261.96  Aligned_cols=187  Identities=34%  Similarity=0.581  Sum_probs=157.0

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++....+..+++..+..++.|++.||.|||+.|++|+||||+||+++   .++.++|+|||++.
T Consensus        75 ~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~~l~dfg~~~  151 (316)
T cd05574          75 YLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLH---ESGHIMLSDFDLSK  151 (316)
T ss_pred             EEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEc---CCCCEEEeecchhh
Confidence            357899999999999998766567899999999999999999999999999999999999998   47889999999886


Q ss_pred             eccCCC------------------------------cccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCCC
Q 014171          118 FIKPGK------------------------------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRP  166 (429)
Q Consensus       118 ~~~~~~------------------------------~~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~p  166 (429)
                      ......                              ......|+..|+|||.+.+. ++.++||||+|+++|+|++|+.|
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~p  231 (316)
T cd05574         152 QSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTP  231 (316)
T ss_pred             cccccccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCC
Confidence            543211                              11133678899999998754 58899999999999999999999


Q ss_pred             CCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCC----HHHHhCCCccccCC
Q 014171          167 FWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT----AAQALSHPWVREGG  229 (429)
Q Consensus       167 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s----~~e~l~h~~~~~~~  229 (429)
                      |.+.+.......+......++.  ...++..++++|.+||+.+|.+|||    ++++++||||+...
T Consensus       232 f~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~~~~~~~~~  296 (316)
T cd05574         232 FKGSNRDETFSNILKKEVTFPG--SPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQHPFFRGVN  296 (316)
T ss_pred             CCCCchHHHHHHHhcCCccCCC--ccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHcCchhhcCC
Confidence            9888877777766655444332  2237899999999999999999999    99999999998754

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=2.2e-32  Score=253.56  Aligned_cols=181  Identities=24%  Similarity=0.393  Sum_probs=150.2

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|+||++||+|.+.+...  +.+++..+..++.|++.||.|||+.|++||||+|+||+++   .++.++|+|||.+.
T Consensus        78 ~~~~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~---~~~~~~l~dfg~~~  152 (263)
T cd06625          78 TLSIFMEYMPGGSVKDQLKAY--GALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRD---SAGNVKLGDFGASK  152 (263)
T ss_pred             eEEEEEEECCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEeecccce
Confidence            456899999999999988654  5799999999999999999999999999999999999998   57889999999987


Q ss_pred             eccCCCcc----cccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCC
Q 014171          118 FIKPGKKF----QDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP  192 (429)
Q Consensus       118 ~~~~~~~~----~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  192 (429)
                      ........    ....++..|+|||.+.+. ++.++|+||+|+++|+|++|+.||...........+......  .....
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~  230 (263)
T cd06625         153 RLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPTN--PQLPS  230 (263)
T ss_pred             eccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchHHHHHHHhccCCC--CCCCc
Confidence            65432211    234678899999998754 588999999999999999999999776655555444433222  22234


Q ss_pred             CCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          193 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       193 ~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                      .++..+.++|.+||..+|.+|||+.++++|+||
T Consensus       231 ~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  263 (263)
T cd06625         231 HVSPDARNFLRRTFVENAKKRPSAEELLRHFFV  263 (263)
T ss_pred             cCCHHHHHHHHHHhhcCcccCCCHHHHhhCCCC
Confidence            678999999999999999999999999999997

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]

Probab=100.00  E-value=4.8e-34  Score=292.91  Aligned_cols=211  Identities=29%  Similarity=0.493  Sum_probs=168.5

Q ss_pred             eecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 014171            5 LIGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL   84 (429)
Q Consensus         5 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~   84 (429)
                      ...+..+.-.++|+|++.+|+...|.-..      ||.||||+||+|.+.+  ..++..+|...+.+..|++.|+.|||+
T Consensus      1281 i~eEm~vlE~lnHpNlV~YyGVEvHRekv------~IFMEyC~~GsLa~ll--~~gri~dE~vt~vyt~qll~gla~LH~ 1352 (1509)
T KOG4645|consen 1281 IAEEMKVLEGLNHPNLVRYYGVEVHREKV------YIFMEYCEGGSLASLL--EHGRIEDEMVTRVYTKQLLEGLAYLHE 1352 (1509)
T ss_pred             hHHHHHHHHhccCccccccCceeecHHHH------HHHHHHhccCcHHHHH--HhcchhhhhHHHHHHHHHHHHHHHHHh
Confidence            34455566677888888887665554333      3568999999999988  444678899999999999999999999


Q ss_pred             CCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCC-----cccccccCCcccccccccCC----CCCCcchHHHHH
Q 014171           85 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVLKRK----SGPESDVWSIGV  155 (429)
Q Consensus        85 ~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~-----~~~~~~g~~~y~aPE~~~~~----~~~~~DiwslG~  155 (429)
                      .|||||||||.||+++   .++.+|++|||.|..+....     ......||+.|||||++.+.    ...++||||+||
T Consensus      1353 ~gIVHRDIK~aNI~Ld---~~g~iK~~DFGsa~ki~~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGC 1429 (1509)
T KOG4645|consen 1353 HGIVHRDIKPANILLD---FNGLIKYGDFGSAVKIKNNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGC 1429 (1509)
T ss_pred             cCceecCCCccceeee---cCCcEEeecccceeEecCchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccc
Confidence            9999999999999999   57899999999998775442     23466899999999999753    256899999999


Q ss_pred             HHHHHhhCCCCCCCCChhHH-HHHHHhc-CCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          156 ITYILLCGRRPFWDKTEDGI-FKEVLRN-KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       156 il~~l~~g~~pf~~~~~~~~-~~~i~~~-~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                      ++.||+||+.||...+.+=. .-.+..+ .+.+|    ..+|.+.++||.+||+.||.+|+++.|+++|.|-+....
T Consensus      1430 VVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P----~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~~f~~~~~d 1502 (1509)
T KOG4645|consen 1430 VVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIP----ERLSSEGRDFLEHCLEQDPKMRWTASQLLEHAFGKSCTD 1502 (1509)
T ss_pred             eEEEeecCCCchhhccchhHHHhHHhccCCCCCc----hhhhHhHHHHHHHHHhcCchhhhHHHHHHHhhccccccc
Confidence            99999999999966544322 2233333 33333    358999999999999999999999999999999776544

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=100.00  E-value=2.5e-32  Score=266.38  Aligned_cols=185  Identities=29%  Similarity=0.431  Sum_probs=149.1

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|+||+. ++|.+.+...  ..+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++..
T Consensus        79 ~~lv~e~~~-~~l~~~~~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~---~~~~~kL~Dfg~a~~  152 (372)
T cd07853          79 IYVVTELMQ-SDLHKIIVSP--QPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVN---SNCVLKICDFGLARV  152 (372)
T ss_pred             EEEEeeccc-cCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEEC---CCCCEEeccccceee
Confidence            478999997 6888887543  6799999999999999999999999999999999999998   578999999999976


Q ss_pred             ccCCC--cccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhc------------
Q 014171          119 IKPGK--KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN------------  182 (429)
Q Consensus       119 ~~~~~--~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~------------  182 (429)
                      .....  ......+++.|+|||.+.+  .++.++||||+||++|+|++|+.||.+.+.......+...            
T Consensus       153 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~~  232 (372)
T cd07853         153 EEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRSA  232 (372)
T ss_pred             cccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHHh
Confidence            54322  2234467899999999865  3588999999999999999999999887765554443321            


Q ss_pred             -----------CCCCCC-----CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          183 -----------KPDFRR-----KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       183 -----------~~~~~~-----~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                                 ....+.     ......++++.+||.+||+.||.+|||+.++++||||+...
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~hp~~~~~~  295 (372)
T cd07853         233 CEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAHPYLDEGR  295 (372)
T ss_pred             hHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcCHhhCCCc
Confidence                       100000     11234578899999999999999999999999999998853

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=100.00  E-value=2.7e-33  Score=259.10  Aligned_cols=184  Identities=35%  Similarity=0.622  Sum_probs=148.1

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...++|||||.+|+|.+++...  ..+++..+..++.|++.||.+||++||+|+||||+||+++   .++.++|+|||.+
T Consensus        71 ~~~~~v~~~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~---~~~~~~l~Dfg~~  145 (260)
T PF00069_consen   71 NYLYIVMEYCPGGSLQDYLQKN--KPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLD---ENGEVKLIDFGSS  145 (260)
T ss_dssp             SEEEEEEEEETTEBHHHHHHHH--SSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEES---TTSEEEESSGTTT
T ss_pred             cccccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccc---ccccccccccccc
Confidence            3456899999999999999733  6899999999999999999999999999999999999999   5788999999998


Q ss_pred             eec-cCCCcccccccCCccccccccc--CCCCCCcchHHHHHHHHHHhhCCCCCCCCChhH---HHHHHHhcCCCCCCCC
Q 014171          117 DFI-KPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDG---IFKEVLRNKPDFRRKP  190 (429)
Q Consensus       117 ~~~-~~~~~~~~~~g~~~y~aPE~~~--~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---~~~~i~~~~~~~~~~~  190 (429)
                      ... ..........++..|+|||++.  ...+.++|+||+|+++|+|++|..||.......   ................
T Consensus       146 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (260)
T PF00069_consen  146 VKLSENNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSDDQLEIIEKILKRPLPSSSQQ  225 (260)
T ss_dssp             EESTSTTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHHHHHHHHHHHHHTHHHHHTTS
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccccc
Confidence            763 3333445667899999999987  345889999999999999999999998773222   2322222111111111


Q ss_pred             CCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          191 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       191 ~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                      ....+..+.++|.+||+.||.+|||+.++++||||
T Consensus       226 ~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~~~~~  260 (260)
T PF00069_consen  226 SREKSEELRDLIKKMLSKDPEQRPSAEELLKHPWF  260 (260)
T ss_dssp             HTTSHHHHHHHHHHHSSSSGGGSTTHHHHHTSGGG
T ss_pred             cchhHHHHHHHHHHHccCChhHCcCHHHHhcCCCC
Confidence            11224889999999999999999999999999997

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=100.00  E-value=2.6e-32  Score=256.21  Aligned_cols=185  Identities=25%  Similarity=0.389  Sum_probs=146.3

Q ss_pred             ccceeEeeecCCCChHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKK-DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      ...|+|||||. |+|.+++.... +..+++..+..++.||+.||.|||++|++|+||+|+||+++   .++.++|+|||+
T Consensus        72 ~~~~~v~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~  147 (285)
T cd07861          72 SRLYLIFEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLID---NKGVIKLADFGL  147 (285)
T ss_pred             CeEEEEEecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEc---CCCcEEECcccc
Confidence            44578999998 68988886543 36799999999999999999999999999999999999998   578899999999


Q ss_pred             ceeccCCCc-ccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCC-------
Q 014171          116 SDFIKPGKK-FQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD-------  185 (429)
Q Consensus       116 a~~~~~~~~-~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~-------  185 (429)
                      +........ .....+++.|+|||++.+  .++.++|+||+||++|+|++|++||.+.+.......+......       
T Consensus       148 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (285)
T cd07861         148 ARAFGIPVRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWP  227 (285)
T ss_pred             eeecCCCcccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhh
Confidence            876543221 233456889999998864  3478899999999999999999999876654433322211100       


Q ss_pred             ------------------CCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          186 ------------------FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       186 ------------------~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                                        ........++++++++|.+||+.||.+|||+.+++.||||
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~~~~~  285 (285)
T cd07861         228 GVTSLPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALNHPYF  285 (285)
T ss_pred             cchhhHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhcCCCC
Confidence                              0001123578899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]

Probab=100.00  E-value=1.2e-33  Score=282.49  Aligned_cols=177  Identities=27%  Similarity=0.447  Sum_probs=149.4

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCcEEEeecCCCCCEEEeecc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFG  114 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~--i~H~dikp~Nil~~~~~~~~~~kL~Dfg  114 (429)
                      ++++|.||||.||.|.+++..+....|+|.++.+|+.|+++|+.+||...  |||||||-+|||++   .++..||||||
T Consensus       115 ~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls---~~g~~KLCDFG  191 (738)
T KOG1989|consen  115 WEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLS---ADGNYKLCDFG  191 (738)
T ss_pred             eEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEc---CCCCEEeCccc
Confidence            45668999999999999998877788999999999999999999999998  99999999999999   57899999999


Q ss_pred             cceeccCCC-ccc---------ccccCCccccccccc---C-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHH
Q 014171          115 LSDFIKPGK-KFQ---------DIVGSAYYVAPEVLK---R-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL  180 (429)
Q Consensus       115 ~a~~~~~~~-~~~---------~~~g~~~y~aPE~~~---~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~  180 (429)
                      .|....... ...         ...-|+.|+|||++.   + +.+.|+|||||||+||.|+....||.+..    .-+|+
T Consensus       192 Satt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg----~laIl  267 (738)
T KOG1989|consen  192 SATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESG----KLAIL  267 (738)
T ss_pred             ccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc----ceeEE
Confidence            987543222 111         123589999999984   2 34899999999999999999999996543    24567


Q ss_pred             hcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          181 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      .+.+.+|..  +.++..+++||..||+.||.+||++-+++.+
T Consensus       268 ng~Y~~P~~--p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~  307 (738)
T KOG1989|consen  268 NGNYSFPPF--PNYSDRLKDLIRTMLQPNPDERPNIYQVLEE  307 (738)
T ss_pred             eccccCCCC--ccHHHHHHHHHHHHhccCcccCCCHHHHHHH
Confidence            777777653  6789999999999999999999999988754

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=100.00  E-value=2.5e-32  Score=284.16  Aligned_cols=188  Identities=29%  Similarity=0.476  Sum_probs=152.6

Q ss_pred             ceeEeeecCCCChHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHC-------CCeecCCCCCcEEEeec-------
Q 014171           39 KLRRIRLCEGGELLDRILAKK--DSRYTEKDAAVVVRQMLRVAAECHLH-------GLVHRDMKPENFLFKSA-------  102 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~lH~~-------~i~H~dikp~Nil~~~~-------  102 (429)
                      .|+|||||.+|+|.++|....  .+.+++..++.++.||+.||.|||+.       +|+||||||+|||++..       
T Consensus        89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i  168 (1021)
T PTZ00266         89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI  168 (1021)
T ss_pred             EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence            468999999999999986532  35799999999999999999999984       49999999999999742       


Q ss_pred             -------CCCCCEEEeecccceeccCCCcccccccCCcccccccccC---CCCCCcchHHHHHHHHHHhhCCCCCCCCCh
Q 014171          103 -------KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTE  172 (429)
Q Consensus       103 -------~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~DiwslG~il~~l~~g~~pf~~~~~  172 (429)
                             .....+||+|||++.............||+.|+|||++.+   .++.++|||||||++|+|++|..||.....
T Consensus       169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~  248 (1021)
T PTZ00266        169 TAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANN  248 (1021)
T ss_pred             cccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCc
Confidence                   1234589999999987655444455679999999999853   358899999999999999999999976655


Q ss_pred             hHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          173 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       173 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      ...+...+...+.+   +....+.++.+||.+||..+|.+||++.++|.|+|++...
T Consensus       249 ~~qli~~lk~~p~l---pi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h~~ik~i~  302 (1021)
T PTZ00266        249 FSQLISELKRGPDL---PIKGKSKELNILIKNLLNLSAKERPSALQCLGYQIIKNVG  302 (1021)
T ss_pred             HHHHHHHHhcCCCC---CcCCCCHHHHHHHHHHhcCChhHCcCHHHHhccHHHhhcC
Confidence            44443333333322   2345789999999999999999999999999999998653

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=100.00  E-value=4.2e-32  Score=261.40  Aligned_cols=155  Identities=23%  Similarity=0.287  Sum_probs=123.5

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc---ccccccCCcccccc
Q 014171           62 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPE  138 (429)
Q Consensus        62 ~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE  138 (429)
                      .+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||+++.......   .....+++.|+|||
T Consensus       170 ~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~---~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE  246 (338)
T cd05102         170 PLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPE  246 (338)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEc---CCCcEEEeecccccccccCcchhcccCCCCCccccCcH
Confidence            478889999999999999999999999999999999998   478899999999976533221   12334567899999


Q ss_pred             cccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCH
Q 014171          139 VLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA  216 (429)
Q Consensus       139 ~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~  216 (429)
                      ++.+ .++.++||||+||++|+|++ |..||.+..................  ....+++.+++++.+||+.||.+|||+
T Consensus       247 ~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dp~~RPs~  324 (338)
T cd05102         247 SIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINEEFCQRLKDGTRMR--APENATPEIYRIMLACWQGDPKERPTF  324 (338)
T ss_pred             HhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHhcCCCCC--CCCCCCHHHHHHHHHHccCChhhCcCH
Confidence            8864 46899999999999999997 9999987654443333333222211  224678999999999999999999999


Q ss_pred             HHHhC
Q 014171          217 AQALS  221 (429)
Q Consensus       217 ~e~l~  221 (429)
                      .++++
T Consensus       325 ~el~~  329 (338)
T cd05102         325 SALVE  329 (338)
T ss_pred             HHHHH
Confidence            99874

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=100.00  E-value=4.2e-32  Score=250.60  Aligned_cols=183  Identities=23%  Similarity=0.387  Sum_probs=155.4

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..++|+||++||+|.+++.......+++..+..++.|++.||.|||++|++|+||+|+||+++.  .+..++|+|||.+.
T Consensus        73 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~--~~~~~~l~d~~~~~  150 (256)
T cd08220          73 ALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDK--HKMVVKIGDFGISK  150 (256)
T ss_pred             EEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEEccCCCce
Confidence            4578999999999999997765567999999999999999999999999999999999999974  34568999999998


Q ss_pred             eccCCCcccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCH
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN  196 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  196 (429)
                      ............++..|+|||.+.+. .+.++|+||+|+++|+|++|+.||.+.+.......+......   +....++.
T Consensus       151 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~  227 (256)
T cd08220         151 ILSSKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLPALVLKIMSGTFA---PISDRYSP  227 (256)
T ss_pred             ecCCCccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchHHHHHHHHhcCCC---CCCCCcCH
Confidence            77655444556788999999998754 478999999999999999999999887766666665544322   12235789


Q ss_pred             HHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          197 SAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       197 ~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                      .+++++.+||..+|.+|||+.++++||||
T Consensus       228 ~l~~li~~~l~~~p~~Rpt~~~ll~~p~~  256 (256)
T cd08220         228 DLRQLILSMLNLDPSKRPQLSQIMAQPIC  256 (256)
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhhCCCC
Confidence            99999999999999999999999999996

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=5.5e-32  Score=253.50  Aligned_cols=186  Identities=33%  Similarity=0.514  Sum_probs=153.0

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+||||+.+|+|.+++.+. +..+++..+..++.|++.||.|||++||+|+||+|+||+++   .++.++|+|||.+.
T Consensus        76 ~~~lv~e~~~~~~L~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~---~~~~~~l~d~g~~~  151 (280)
T cd06611          76 KLWILIEFCDGGALDSIMLEL-ERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLT---LDGDVKLADFGVSA  151 (280)
T ss_pred             eEEEEeeccCCCcHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEC---CCCCEEEccCccch
Confidence            457899999999999887553 35799999999999999999999999999999999999998   57899999999886


Q ss_pred             eccCC-CcccccccCCccccccccc------CCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCC
Q 014171          118 FIKPG-KKFQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP  190 (429)
Q Consensus       118 ~~~~~-~~~~~~~g~~~y~aPE~~~------~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  190 (429)
                      ..... .......+++.|+|||.+.      ..++.++|+||+|+++|+|++|+.||.+.........+........ ..
T Consensus       152 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~  230 (280)
T cd06611         152 KNKSTLQKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILKSEPPTL-DQ  230 (280)
T ss_pred             hhcccccccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhcCCCCCc-CC
Confidence            55332 2223456889999999874      2346789999999999999999999988776666655554432211 12


Q ss_pred             CCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          191 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       191 ~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      ...++.++.++|.+||+.+|.+||++.++++||||+..
T Consensus       231 ~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~  268 (280)
T cd06611         231 PSKWSSSFNDFLKSCLVKDPDDRPTAAELLKHPFVSDQ  268 (280)
T ss_pred             cccCCHHHHHHHHHHhccChhhCcCHHHHhcChhhccc
Confidence            23578899999999999999999999999999999876

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]

Probab=100.00  E-value=2.3e-32  Score=235.67  Aligned_cols=214  Identities=24%  Similarity=0.423  Sum_probs=175.8

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG   86 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~   86 (429)
                      ..++|+|+++++.++........-    .....|+||.+|+. +|.-++.+ +..+++..++..++++++.||.|+|++.
T Consensus        71 ~~lkHenv~nliEic~tk~Tp~~r----~r~t~ylVf~~ceh-DLaGlLsn-~~vr~sls~Ikk~Mk~Lm~GL~~iHr~k  144 (376)
T KOG0669|consen   71 QLLKHENVVNLIEICRTKATPTNR----DRATFYLVFDFCEH-DLAGLLSN-RKVRFSLSEIKKVMKGLMNGLYYIHRNK  144 (376)
T ss_pred             HHhcchhHHHHHHHHhhccCCccc----ccceeeeeHHHhhh-hHHHHhcC-ccccccHHHHHHHHHHHHHHHHHHHHhh
Confidence            467899999999999876544433    22335789999985 77776644 3468999999999999999999999999


Q ss_pred             CeecCCCCCcEEEeecCCCCCEEEeecccceeccCCC-----cccccccCCcccccccccC--CCCCCcchHHHHHHHHH
Q 014171           87 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYI  159 (429)
Q Consensus        87 i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~-----~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~  159 (429)
                      |+|||+|+.|+|++   .++.+||+|||+++.+....     .+...+-|.+|++||.+.+  .++++.|+|+.||++.+
T Consensus       145 ilHRDmKaaNvLIt---~dgilklADFGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimae  221 (376)
T KOG0669|consen  145 ILHRDMKAANVLIT---KDGILKLADFGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAE  221 (376)
T ss_pred             HHhhcccHhhEEEc---CCceEEeeccccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHH
Confidence            99999999999999   57999999999997664322     2344456899999999975  57999999999999999


Q ss_pred             HhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC-------------------------------CHHHHHHHHHhccC
Q 014171          160 LLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI-------------------------------SNSAKDFVKKLLVK  208 (429)
Q Consensus       160 l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~-------------------------------~~~~~~li~~~l~~  208 (429)
                      |+||.+.+.+.++...+..|..-...+.+..||.+                               ++++.+|+.+||..
T Consensus       222 Mwtrspimqgnteqqql~~Is~LcGs~tkevWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~  301 (376)
T KOG0669|consen  222 MWTRSPIMQGNTEQQQLHLISQLCGSITKEVWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKL  301 (376)
T ss_pred             HHccCccccCChHHHHHHHHHHHhccCCcccCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhcc
Confidence            99999999999998888777665555555555542                               23678999999999


Q ss_pred             CccCcCCHHHHhCCCccccCC
Q 014171          209 DPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       209 dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      ||.+|++++++++|.||....
T Consensus       302 DP~kR~~ad~alnh~~F~kdp  322 (376)
T KOG0669|consen  302 DPTKRIDADQALNHDFFWKDP  322 (376)
T ss_pred             CcccCcchHhhhchhhhhcCC
Confidence            999999999999999998764

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=100.00  E-value=7.1e-32  Score=250.16  Aligned_cols=184  Identities=29%  Similarity=0.519  Sum_probs=153.7

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|+||++||+|.+++.+.  ..+++..+..++.||+.||.|||++|++|+||+|+||+++   .++.++|+|||.+.
T Consensus        67 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~---~~~~~~l~df~~~~  141 (262)
T cd05572          67 YIYMLMEYCLGGELWTILRDR--GLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLD---SNGYVKLVDFGFAK  141 (262)
T ss_pred             ccEEEEecCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEc---CCCCEEEeeCCccc
Confidence            457899999999999999554  5689999999999999999999999999999999999998   47889999999998


Q ss_pred             eccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCC--hhHHHHHHHhcCCCCCCCCCCCC
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKT--EDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      ............+++.|+|||.+.+ .++.++|+||+|+++|+|++|..||....  .......+..+......  ....
T Consensus       142 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  219 (262)
T cd05572         142 KLKSGQKTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDILKGNGKLEF--PNYI  219 (262)
T ss_pred             ccCcccccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHhccCCCCCC--Cccc
Confidence            7755433344578899999998864 45889999999999999999999998776  45555555532222221  2345


Q ss_pred             CHHHHHHHHHhccCCccCcCC-----HHHHhCCCccccC
Q 014171          195 SNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG  228 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s-----~~e~l~h~~~~~~  228 (429)
                      +..++++|.+||+.+|.+||+     ++|+++||||++.
T Consensus       220 ~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~  258 (262)
T cd05572         220 DKAAKDLIKQLLRRNPEERLGNLKGGIKDIKKHKWFNGF  258 (262)
T ss_pred             CHHHHHHHHHHccCChhhCcCCcccCHHHHhcChhhhCC
Confidence            889999999999999999999     9999999999864

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=100.00  E-value=7.7e-32  Score=251.68  Aligned_cols=186  Identities=29%  Similarity=0.488  Sum_probs=154.4

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|+||+.+|+|.+++...   .+++..+..++.|++.||.|||+.+++|+||+|+||+++   .++.++|+|||.+
T Consensus        72 ~~~~~v~e~~~~~~L~~~~~~~---~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~---~~~~~~l~d~g~~  145 (274)
T cd06609          72 SKLWIIMEYCGGGSCLDLLKPG---KLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLS---EEGDVKLADFGVS  145 (274)
T ss_pred             CeEEEEEEeeCCCcHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEC---CCCCEEEcccccc
Confidence            3457899999999999988543   799999999999999999999999999999999999999   4788999999999


Q ss_pred             eeccCC-CcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DFIKPG-KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~~~~~-~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      ...... .......+++.|+|||.+.+ .++.++|+||+||++|+|++|+.||...........+........  ....+
T Consensus       146 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~  223 (274)
T cd06609         146 GQLTSTMSKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMRVLFLIPKNNPPSL--EGNKF  223 (274)
T ss_pred             eeecccccccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHHHHHHhhhcCCCCC--ccccc
Confidence            877644 23344578889999999865 458899999999999999999999977665555544444432111  11127


Q ss_pred             CHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                      +.++.+++.+||..+|++|||++++++||||+....
T Consensus       224 ~~~~~~~l~~~l~~~p~~Rpt~~~il~~~~~~~~~~  259 (274)
T cd06609         224 SKPFKDFVSLCLNKDPKERPSAKELLKHKFIKKAKK  259 (274)
T ss_pred             CHHHHHHHHHHhhCChhhCcCHHHHhhChhhcCCCc
Confidence            889999999999999999999999999999988644

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=100.00  E-value=8.8e-32  Score=254.26  Aligned_cols=187  Identities=28%  Similarity=0.484  Sum_probs=154.1

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|+||+.||+|..++..   ..+++.++..++.|++.||.|||++|++||||+|+||+++   .++.++|+|||++.
T Consensus        90 ~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~---~~~~~kl~dfg~~~  163 (296)
T cd06655          90 ELFVVMEYLAGGSLTDVVTE---TCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLG---MDGSVKLTDFGFCA  163 (296)
T ss_pred             eEEEEEEecCCCcHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEccCccch
Confidence            35789999999999998743   3689999999999999999999999999999999999998   57889999999987


Q ss_pred             eccCCCc-ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~~~~~-~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      ....... .....++..|+|||.+.+ .++.++|+||+||++|+|++|+.||.+.+.......+...... ....+..++
T Consensus       164 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~  242 (296)
T cd06655         164 QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTP-ELQNPEKLS  242 (296)
T ss_pred             hcccccccCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCc-ccCCcccCC
Confidence            6543322 234467889999998865 4588999999999999999999999887765554444433221 112234678


Q ss_pred             HHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCC
Q 014171          196 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA  231 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~  231 (429)
                      +.+.++|.+||..||.+||++.++++||||+.....
T Consensus       243 ~~~~~li~~~l~~dp~~Rpt~~~il~~~~~~~~~~~  278 (296)
T cd06655         243 PIFRDFLNRCLEMDVEKRGSAKELLQHPFLKLAKPL  278 (296)
T ss_pred             HHHHHHHHHHhhcChhhCCCHHHHhhChHhhhcccc
Confidence            999999999999999999999999999999976543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.98  E-value=6.6e-32  Score=250.76  Aligned_cols=186  Identities=28%  Similarity=0.439  Sum_probs=153.7

Q ss_pred             ccceeEeeecCCCChHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKD-SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      ...|+|+|||.|++|.+++..... ..+++..+..++.|++.||.|||++|++|+||+|+||+++   +++.++|+|||.
T Consensus        72 ~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~---~~~~~~l~df~~  148 (267)
T cd06610          72 DELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLG---EDGSVKIADFGV  148 (267)
T ss_pred             CEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEc---CCCCEEEcccch
Confidence            445789999999999999966533 5789999999999999999999999999999999999999   467899999999


Q ss_pred             ceeccCCCcc-----cccccCCcccccccccCC--CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCC
Q 014171          116 SDFIKPGKKF-----QDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR  188 (429)
Q Consensus       116 a~~~~~~~~~-----~~~~g~~~y~aPE~~~~~--~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~  188 (429)
                      +.........     ....|+..|+|||.+...  .+.++|+||+||++|+|++|+.||...+.................
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~  228 (267)
T cd06610         149 SASLADGGDRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPMKVLMLTLQNDPPSLE  228 (267)
T ss_pred             HHHhccCccccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChhhhHHHHhcCCCCCcC
Confidence            8765433221     334688899999988654  588999999999999999999999877766666555544332221


Q ss_pred             CC--CCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          189 KP--WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       189 ~~--~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                      ..  +..++..+.+++.+||+.||.+||++.++++||||
T Consensus       229 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~~p~~  267 (267)
T cd06610         229 TGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLKHKFF  267 (267)
T ss_pred             CccccccccHHHHHHHHHHcCCChhhCcCHHHHhhCCCC
Confidence            11  24678999999999999999999999999999997

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.98  E-value=8.6e-32  Score=250.24  Aligned_cols=181  Identities=29%  Similarity=0.447  Sum_probs=149.5

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...++|+||+.+++|.+++...  +.+++..+..++.|++.||.|||++|++||||+|+||+++   .++.++|+|||.+
T Consensus        79 ~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~---~~~~~~l~dfg~~  153 (267)
T cd06628          79 DHLNIFLEYVPGGSVAALLNNY--GAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVD---NKGGIKISDFGIS  153 (267)
T ss_pred             CccEEEEEecCCCCHHHHHHhc--cCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEc---CCCCEEecccCCC
Confidence            3456899999999999999554  6789999999999999999999999999999999999998   5788999999998


Q ss_pred             eeccCCC-------cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCC
Q 014171          117 DFIKPGK-------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR  188 (429)
Q Consensus       117 ~~~~~~~-------~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~  188 (429)
                      .......       ......|+..|+|||.+.+ .++.++|+||+||++|+|++|+.||.+.+.......+....   .+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~---~~  230 (267)
T cd06628         154 KKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQAIFKIGENA---SP  230 (267)
T ss_pred             cccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHHHHHHHhccC---CC
Confidence            7664211       1123457889999999864 45788999999999999999999998766555444443321   22


Q ss_pred             CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          189 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       189 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                      .....++..+.++|.+||+.||.+||++.++++||||
T Consensus       231 ~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  267 (267)
T cd06628         231 EIPSNISSEAIDFLEKTFEIDHNKRPTAAELLKHPFL  267 (267)
T ss_pred             cCCcccCHHHHHHHHHHccCCchhCcCHHHHhhCCCC
Confidence            2234578999999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.98  E-value=6.7e-32  Score=255.10  Aligned_cols=187  Identities=28%  Similarity=0.461  Sum_probs=152.3

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+||||+.||+|.+++..   ..+++.++..++.|++.||.|||+.||+||||||+||+++   .++.++|+|||.+
T Consensus        90 ~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~---~~~~~kl~dfg~~  163 (296)
T cd06654          90 DELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGFC  163 (296)
T ss_pred             CEEEEeecccCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEc---CCCCEEECccccc
Confidence            345789999999999998843   4689999999999999999999999999999999999998   5788999999998


Q ss_pred             eeccCCCc-ccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~~~~~~~-~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      ........ .....+++.|+|||.+.+. .+.++|+||+||++|+|++|+.||...........+..... ........+
T Consensus       164 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~  242 (296)
T cd06654         164 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGT-PELQNPEKL  242 (296)
T ss_pred             hhccccccccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHHHhHHHHhcCCC-CCCCCcccc
Confidence            76543322 2344688999999988654 58899999999999999999999987766544433332221 111223467


Q ss_pred             CHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                      +..+.+++.+||..+|.+||++.++++||||.....
T Consensus       243 ~~~l~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~  278 (296)
T cd06654         243 SAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKP  278 (296)
T ss_pred             CHHHHHHHHHHCcCCcccCcCHHHHhhChhhhccCC
Confidence            889999999999999999999999999999987643

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.98  E-value=1.5e-31  Score=252.23  Aligned_cols=188  Identities=28%  Similarity=0.435  Sum_probs=152.5

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+||||+.||+|..++.+. ...+++..+..++.|++.||.|||++|++||||||+||+++   .++.++|+|||.+
T Consensus        82 ~~~~lv~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~kl~dfg~~  157 (292)
T cd06644          82 GKLWIMIEFCPGGAVDAIMLEL-DRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLT---LDGDIKLADFGVS  157 (292)
T ss_pred             CeEEEEEecCCCCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEc---CCCCEEEccCccc
Confidence            3457899999999998877544 35799999999999999999999999999999999999998   5788999999988


Q ss_pred             eeccCC-CcccccccCCcccccccccC------CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCC
Q 014171          117 DFIKPG-KKFQDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK  189 (429)
Q Consensus       117 ~~~~~~-~~~~~~~g~~~y~aPE~~~~------~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  189 (429)
                      ...... .......+++.|+|||.+.+      .++.++|+||+||++|+|++|..||...+.......+...... ...
T Consensus       158 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-~~~  236 (292)
T cd06644         158 AKNVKTLQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSEPP-TLS  236 (292)
T ss_pred             eeccccccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHHhcCCCc-cCC
Confidence            754322 22244567889999998742      3467899999999999999999999877665555555433321 111


Q ss_pred             CCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          190 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       190 ~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      ....++.++.++|.+||..+|++||+++++++||||+...
T Consensus       237 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~  276 (292)
T cd06644         237 QPSKWSMEFRDFLKTALDKHPETRPSAAQLLEHPFVSSVT  276 (292)
T ss_pred             CCcccCHHHHHHHHHHhcCCcccCcCHHHHhcCccccccc
Confidence            2245788999999999999999999999999999997754

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.98  E-value=6.1e-32  Score=254.83  Aligned_cols=190  Identities=29%  Similarity=0.553  Sum_probs=154.8

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+||||+.+|+|.+++..   +.+++..+..++.||+.||.|||++||+||||||+||+++   .++.++|+|||++
T Consensus        92 ~~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~---~~~~~kL~dfg~~  165 (292)
T cd06658          92 DELWVVMEFLEGGALTDIVTH---TRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLT---SDGRIKLSDFGFC  165 (292)
T ss_pred             CeEEEEEeCCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEc---CCCCEEEccCcch
Confidence            345789999999999987733   4689999999999999999999999999999999999998   4788999999998


Q ss_pred             eeccCCC-cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~~~~~~-~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      ....... ......|++.|+|||.+.+ .++.++|+||+|+++|+|++|+.||.+.........+....... ......+
T Consensus       166 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~  244 (292)
T cd06658         166 AQVSKEVPKRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDNLPPR-VKDSHKV  244 (292)
T ss_pred             hhcccccccCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCc-ccccccc
Confidence            7553222 2234568899999999864 45889999999999999999999998877665555444332211 1122357


Q ss_pred             CHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCCCC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE  233 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~~~  233 (429)
                      +..+.+++.+||..||.+|||++++++||||+....++.
T Consensus       245 ~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~~~~~~~~~  283 (292)
T cd06658         245 SSVLRGFLDLMLVREPSQRATAQELLQHPFLKLAGPPSC  283 (292)
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhhChhhhccCCccc
Confidence            889999999999999999999999999999998766553

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.98  E-value=5.4e-32  Score=254.15  Aligned_cols=185  Identities=31%  Similarity=0.483  Sum_probs=149.9

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|+||+ |++|.+++.... ..+++.++..++.||+.||.|||+.|++|+||||+||+++   .++.++|+|||.+
T Consensus        72 ~~~~~v~e~~-~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~---~~~~~~l~dfg~~  146 (286)
T cd07832          72 SGFVLVMEYM-PSDLSEVLRDEE-RPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLIS---ADGVLKIADFGLA  146 (286)
T ss_pred             CeeEEEeccc-CCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEc---CCCcEEEeeeeec
Confidence            3457899999 999999886543 6799999999999999999999999999999999999998   4788999999998


Q ss_pred             eeccCCC--cccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCC------
Q 014171          117 DFIKPGK--KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF------  186 (429)
Q Consensus       117 ~~~~~~~--~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~------  186 (429)
                      .......  ......++..|+|||.+.+  .++.++||||+||++|+|++|.+||.+.........+.......      
T Consensus       147 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (286)
T cd07832         147 RLFSEEEPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWP  226 (286)
T ss_pred             ccccCCCCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHh
Confidence            7665433  2344578899999998854  34789999999999999999988887776655555444321110      


Q ss_pred             -------------CC-------CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccc
Q 014171          187 -------------RR-------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR  226 (429)
Q Consensus       187 -------------~~-------~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~  226 (429)
                                   +.       ...+..+..+.++|.+||+.+|.+|||++++++||||.
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h~~~~  286 (286)
T cd07832         227 GLTSLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRHPYFT  286 (286)
T ss_pred             hccCcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhCcCcC
Confidence                         00       11235678899999999999999999999999999984

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.98  E-value=9.4e-32  Score=252.69  Aligned_cols=190  Identities=27%  Similarity=0.352  Sum_probs=151.4

Q ss_pred             ccceeEeeecCCCChHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEeecCCCCCEEEeecc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKK-DSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKATDFG  114 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qil~aL~~lH~-~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg  114 (429)
                      ...|+|||||+||+|..++.... ...+++..+..++.|++.||.|||+ .||+|+||||+||+++   .++.++|+|||
T Consensus        72 ~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~---~~~~~~l~dfg  148 (286)
T cd06622          72 GAVYMCMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVN---GNGQVKLCDFG  148 (286)
T ss_pred             CeEEEEEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEEC---CCCCEEEeecC
Confidence            44578999999999988875431 2478999999999999999999997 5999999999999998   47889999999


Q ss_pred             cceeccCCCcccccccCCcccccccccCC-------CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCC
Q 014171          115 LSDFIKPGKKFQDIVGSAYYVAPEVLKRK-------SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR  187 (429)
Q Consensus       115 ~a~~~~~~~~~~~~~g~~~y~aPE~~~~~-------~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~  187 (429)
                      .+...... ......+++.|+|||.+.+.       ++.++|+||+||++|+|++|+.||...........+.......+
T Consensus       149 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  227 (286)
T cd06622         149 VSGNLVAS-LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIFAQLSAIVDGDP  227 (286)
T ss_pred             CcccccCC-ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHHHHHHHHhhcCC
Confidence            98765332 22344678899999988532       36789999999999999999999976655444433222221122


Q ss_pred             CCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          188 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       188 ~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                      ...++.++.+++++|.+||+.+|.+||+++++++||||.....
T Consensus       228 ~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~~~~~~~~~  270 (286)
T cd06622         228 PTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEHPWLVKYKN  270 (286)
T ss_pred             CCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcChhhhhccC
Confidence            2333458999999999999999999999999999999987653

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.98  E-value=1.5e-31  Score=246.96  Aligned_cols=182  Identities=26%  Similarity=0.458  Sum_probs=155.8

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..++|||||.||+|.+++.+.+...+++.++..++.|++.||.|||+.|++|+||+|+||+++   .++.+||+|||.+.
T Consensus        73 ~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~---~~~~~kl~d~~~~~  149 (256)
T cd08221          73 TLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLT---KAGLIKLGDFGISK  149 (256)
T ss_pred             eEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEe---CCCCEEECcCcceE
Confidence            346799999999999999776566799999999999999999999999999999999999998   57889999999987


Q ss_pred             eccCCC-cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~~~~-~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      ...... ......+++.|.|||.+.+ ..+.++|+||+|+++|+|++|..||......+....+..+.....   .+.++
T Consensus       150 ~~~~~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~  226 (256)
T cd08221         150 ILGSEYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPLNLVVKIVQGNYTPV---VSVYS  226 (256)
T ss_pred             EcccccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC---ccccC
Confidence            664433 2345578999999998865 357889999999999999999999988777777777765543322   25678


Q ss_pred             HHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          196 NSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                      .++.+++.+||+.+|.+||++.++++|+|+
T Consensus       227 ~~~~~~i~~~l~~~p~~R~s~~~ll~~~~l  256 (256)
T cd08221         227 SELISLVHSLLQQDPEKRPTADEVLDQPLL  256 (256)
T ss_pred             HHHHHHHHHHcccCcccCCCHHHHhhCcCC
Confidence            999999999999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.98  E-value=5.7e-32  Score=254.81  Aligned_cols=181  Identities=30%  Similarity=0.534  Sum_probs=155.7

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.+|+|.+++...  +.+++..+..++.|++.||.|||++|++|+||+|+||+++   .++.++|+|||++.
T Consensus        75 ~~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~---~~~~~kl~dfg~~~  149 (290)
T cd05580          75 NLYLVMEYVPGGELFSHLRKS--GRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLD---SDGYIKITDFGFAK  149 (290)
T ss_pred             eEEEEEecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEC---CCCCEEEeeCCCcc
Confidence            356899999999999998554  6899999999999999999999999999999999999998   47889999999988


Q ss_pred             eccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCH
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN  196 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  196 (429)
                      .....  .....+++.|+|||.+.+ ..+.++|+||+|+++|+|++|+.||...........+..+...++    ..++.
T Consensus       150 ~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~  223 (290)
T cd05580         150 RVKGR--TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKILEGKVRFP----SFFSP  223 (290)
T ss_pred             ccCCC--CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCccCC----ccCCH
Confidence            76543  344578899999998864 457889999999999999999999988776666666665554433    35689


Q ss_pred             HHHHHHHHhccCCccCcC-----CHHHHhCCCccccCC
Q 014171          197 SAKDFVKKLLVKDPRARL-----TAAQALSHPWVREGG  229 (429)
Q Consensus       197 ~~~~li~~~l~~dp~~R~-----s~~e~l~h~~~~~~~  229 (429)
                      .++++|.+||..||.+|+     +++++++||||+...
T Consensus       224 ~l~~li~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~  261 (290)
T cd05580         224 DAKDLIRNLLQVDLTKRLGNLKNGVNDIKNHPWFAGID  261 (290)
T ss_pred             HHHHHHHHHccCCHHHccCcccCCHHHHHcCcccccCC
Confidence            999999999999999999     899999999997753

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.98  E-value=6.6e-32  Score=257.58  Aligned_cols=186  Identities=25%  Similarity=0.376  Sum_probs=138.9

Q ss_pred             ceeEeeecCCCChHHHHHhh-------cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeec-CCCCCEEE
Q 014171           39 KLRRIRLCEGGELLDRILAK-------KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA-KEDSSLKA  110 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~-------~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~-~~~~~~kL  110 (429)
                      .|+|+||+. ++|.+++...       ....+++..+..++.||+.||.|||+.||+||||||+||++... ...+.+||
T Consensus        75 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl  153 (317)
T cd07867          75 VWLLFDYAE-HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKI  153 (317)
T ss_pred             EEEEEeeeC-CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEE
Confidence            468999987 5787777432       12358999999999999999999999999999999999999532 24678999


Q ss_pred             eecccceeccCCC----cccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChh---------HH
Q 014171          111 TDFGLSDFIKPGK----KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTED---------GI  175 (429)
Q Consensus       111 ~Dfg~a~~~~~~~----~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~---------~~  175 (429)
                      +|||+++......    ......||+.|+|||++.+  .++.++||||+||++|+|+||++||......         ..
T Consensus       154 ~DfG~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~  233 (317)
T cd07867         154 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQ  233 (317)
T ss_pred             eeccceeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHH
Confidence            9999998664322    1234578999999999864  3588999999999999999999999654321         11


Q ss_pred             HHHHHhcC--------------CCCC--------------------CCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          176 FKEVLRNK--------------PDFR--------------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       176 ~~~i~~~~--------------~~~~--------------------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ...+....              +.++                    .......+..+.+||.+||+.||.+|||++|+|+
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dP~~R~t~~e~l~  313 (317)
T cd07867         234 LDRIFSVMGFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMDPTKRITSEQALQ  313 (317)
T ss_pred             HHHHHHhcCCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccCcccccCHHHHhc
Confidence            11111000              0000                    0000123566889999999999999999999999


Q ss_pred             CCcc
Q 014171          222 HPWV  225 (429)
Q Consensus       222 h~~~  225 (429)
                      ||||
T Consensus       314 hp~f  317 (317)
T cd07867         314 DPYF  317 (317)
T ss_pred             CCCC
Confidence            9998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.98  E-value=1.2e-31  Score=254.92  Aligned_cols=186  Identities=25%  Similarity=0.376  Sum_probs=147.6

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~-~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      ...|+||||+.||+|.+++.+.  +.+++..+..++.|++.||.|||+ .+++|+||||+||+++   .++.++|+|||+
T Consensus        72 ~~~~lv~ey~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~---~~~~~~l~dfg~  146 (308)
T cd06615          72 GEISICMEHMDGGSLDQVLKKA--GRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVN---SRGEIKLCDFGV  146 (308)
T ss_pred             CEEEEEeeccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEe---cCCcEEEccCCC
Confidence            3457899999999999998654  679999999999999999999997 6999999999999998   477899999999


Q ss_pred             ceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCC--------
Q 014171          116 SDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF--------  186 (429)
Q Consensus       116 a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~--------  186 (429)
                      +....... .....+++.|+|||.+.+ .++.++|+||+||++|+|++|+.||...+.......+.......        
T Consensus       147 ~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (308)
T cd06615         147 SGQLIDSM-ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRP  225 (308)
T ss_pred             cccccccc-cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCccc
Confidence            87653322 244578899999999865 35889999999999999999999997655333222111110000        


Q ss_pred             --------------------------CCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          187 --------------------------RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       187 --------------------------~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                                                +..+...++.++++++.+||..+|++|||+.++++||||...
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~  293 (308)
T cd06615         226 VSGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPFIKRA  293 (308)
T ss_pred             ccCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhhc
Confidence                                      000112367889999999999999999999999999999875

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.98  E-value=1e-31  Score=250.51  Aligned_cols=183  Identities=29%  Similarity=0.487  Sum_probs=149.1

Q ss_pred             ceeEeeecCCCChHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           39 KLRRIRLCEGGELLDRILAKK--DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      .|+|||||.+|+|.+++....  +..+++..+..++.|++.||.|||++|++|+||+|+||+++   .++.++|+|||.+
T Consensus        84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~---~~~~~~l~d~~~~  160 (275)
T cd06608          84 LWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLT---KNAEVKLVDFGVS  160 (275)
T ss_pred             EEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEc---cCCeEEECCCccc
Confidence            468999999999999886543  56899999999999999999999999999999999999998   4788999999998


Q ss_pred             eeccCCC-cccccccCCcccccccccC------CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCC
Q 014171          117 DFIKPGK-KFQDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK  189 (429)
Q Consensus       117 ~~~~~~~-~~~~~~g~~~y~aPE~~~~------~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  189 (429)
                      ....... ......|+..|+|||.+..      .++.++|+||+||++|+|++|+.||...........+........ .
T Consensus       161 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~  239 (275)
T cd06608         161 AQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMRALFKIPRNPPPTL-K  239 (275)
T ss_pred             eecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHHHHHHhhccCCCCC-C
Confidence            7654322 2234568889999998743      246789999999999999999999987655555555444332111 1


Q ss_pred             CCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          190 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       190 ~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                      .....+..++++|.+||..||.+|||+.++++|||+
T Consensus       240 ~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~~~~~  275 (275)
T cd06608         240 SPENWSKKFNDFISECLIKNYEQRPFMEELLEHPFI  275 (275)
T ss_pred             chhhcCHHHHHHHHHHhhcChhhCcCHHHHhcCCCC
Confidence            112367899999999999999999999999999996

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.98  E-value=1.2e-31  Score=251.82  Aligned_cols=183  Identities=28%  Similarity=0.490  Sum_probs=146.8

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..++||||++++.|..++..  ...+++..+..++.|++.||.|||+.|++|+||||+||+++   .++.++|+|||++.
T Consensus        74 ~~~~v~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~  148 (286)
T cd07847          74 KLHLVFEYCDHTVLNELEKN--PRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILIT---KQGQIKLCDFGFAR  148 (286)
T ss_pred             EEEEEEeccCccHHHHHHhC--CCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEc---CCCcEEECccccce
Confidence            45789999998888776533  35799999999999999999999999999999999999998   47889999999998


Q ss_pred             eccCCC-cccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCC----------
Q 014171          118 FIKPGK-KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP----------  184 (429)
Q Consensus       118 ~~~~~~-~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~----------  184 (429)
                      ...... ......++..|+|||.+.+  .++.++|+||+|+++|+|++|+.||.+.+..+....+.....          
T Consensus       149 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (286)
T cd07847         149 ILTGPGDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIF  228 (286)
T ss_pred             ecCCCcccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhc
Confidence            765443 2334567889999998754  357899999999999999999999987765544433322100          


Q ss_pred             ---------CCCC--------CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          185 ---------DFRR--------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       185 ---------~~~~--------~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                               ..+.        ...+.++..+.+|+.+||+.+|++||++.+++.||||
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~~~f  286 (286)
T cd07847         229 STNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLEHPYF  286 (286)
T ss_pred             ccccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhcCCCC
Confidence                     0000        0124568889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.98  E-value=4e-32  Score=248.82  Aligned_cols=186  Identities=26%  Similarity=0.472  Sum_probs=167.1

Q ss_pred             ccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecc
Q 014171           35 LPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG  114 (429)
Q Consensus        35 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg  114 (429)
                      ...+.|+|||||.||+|.-.+...  +.+.|..+..++.+|+.||-+||++||++||||.+||+++   ..+++||+|||
T Consensus       421 TmDRLyFVMEyvnGGDLMyhiQQ~--GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd---~eGHiKi~DFG  495 (683)
T KOG0696|consen  421 TMDRLYFVMEYVNGGDLMYHIQQV--GKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLD---SEGHIKIADFG  495 (683)
T ss_pred             hhhheeeEEEEecCchhhhHHHHh--cccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEec---cCCceEeeecc
Confidence            345568999999999998888554  8999999999999999999999999999999999999999   58999999999


Q ss_pred             cceec-cCCCcccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCC
Q 014171          115 LSDFI-KPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP  192 (429)
Q Consensus       115 ~a~~~-~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  192 (429)
                      +++.- -......+.+|||-|+|||++. .+|+..+|+||+||+||||+.|++||.+.++.+..+.|...+..++.    
T Consensus       496 mcKEni~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~ehnvsyPK----  571 (683)
T KOG0696|consen  496 MCKENIFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIMEHNVSYPK----  571 (683)
T ss_pred             cccccccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHccCcCcc----
Confidence            98753 3445567889999999999886 67899999999999999999999999999999999999999988875    


Q ss_pred             CCCHHHHHHHHHhccCCccCcCCH-----HHHhCCCccccCC
Q 014171          193 SISNSAKDFVKKLLVKDPRARLTA-----AQALSHPWVREGG  229 (429)
Q Consensus       193 ~~~~~~~~li~~~l~~dp~~R~s~-----~e~l~h~~~~~~~  229 (429)
                      ++|.++.++...+|...|.+|...     .++-.||||+...
T Consensus       572 slSkEAv~ickg~ltK~P~kRLGcg~~ge~di~~H~FFR~iD  613 (683)
T KOG0696|consen  572 SLSKEAVAICKGLLTKHPGKRLGCGPEGERDIREHPFFRRID  613 (683)
T ss_pred             cccHHHHHHHHHHhhcCCccccCCCCccccchhhCcchhhcc
Confidence            689999999999999999999743     5788999998764

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.98  E-value=2.6e-31  Score=250.37  Aligned_cols=184  Identities=26%  Similarity=0.433  Sum_probs=150.2

Q ss_pred             ceeEeeecCCCChHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           39 KLRRIRLCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      .|+|+||+.||+|.+++...  .+..+++..+..++.|++.||.|||+.|++|+||||+||+++   .++.++|+|||.+
T Consensus        99 ~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~---~~~~~kl~dfg~~  175 (291)
T cd06639          99 LWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLT---TEGGVKLVDFGVS  175 (291)
T ss_pred             eEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEc---CCCCEEEeecccc
Confidence            57899999999999988542  346789999999999999999999999999999999999998   4778999999998


Q ss_pred             eeccCCC-cccccccCCcccccccccC------CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCC
Q 014171          117 DFIKPGK-KFQDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK  189 (429)
Q Consensus       117 ~~~~~~~-~~~~~~g~~~y~aPE~~~~------~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  189 (429)
                      ....... ......|+..|+|||.+..      ..+.++|+||+||++|+|++|++||...........+....... ..
T Consensus       176 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~~~-~~  254 (291)
T cd06639         176 AQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPVKTLFKIPRNPPPT-LL  254 (291)
T ss_pred             hhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHHHHHHHHhcCCCCC-CC
Confidence            7654322 2234567889999998753      24789999999999999999999998776655555554433211 11


Q ss_pred             CCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccc
Q 014171          190 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR  226 (429)
Q Consensus       190 ~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~  226 (429)
                      .....+..+.++|.+||+.+|.+||++.++++||||+
T Consensus       255 ~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~~~~~  291 (291)
T cd06639         255 HPEKWCRSFNHFISQCLIKDFEARPSVTHLLEHPFIK  291 (291)
T ss_pred             cccccCHHHHHHHHHHhhcChhhCcCHHHHhcCcccC
Confidence            1234678899999999999999999999999999985

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.98  E-value=1.4e-31  Score=247.03  Aligned_cols=183  Identities=28%  Similarity=0.472  Sum_probs=149.1

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|+||+.+++|.+++... ...+++..+..++.|++.||.|||+.|++|+||+|+||+++   .++.++|+|||.+.
T Consensus        72 ~~~l~~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~---~~~~~~l~dfg~~~  147 (256)
T cd06612          72 DLWIVMEYCGAGSVSDIMKIT-NKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLN---EEGQAKLADFGVSG  147 (256)
T ss_pred             cEEEEEecCCCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEC---CCCcEEEcccccch
Confidence            457899999999999988543 36789999999999999999999999999999999999998   47789999999988


Q ss_pred             eccCCC-cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~~~~-~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      ...... ......++..|+|||.+.+ .++.++|+||+|+++|+|++|+.||...........+...... .......++
T Consensus       148 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~~  226 (256)
T cd06612         148 QLTDTMAKRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIFMIPNKPPP-TLSDPEKWS  226 (256)
T ss_pred             hcccCccccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhhhhccCCCC-CCCchhhcC
Confidence            765443 2234457889999999865 4588999999999999999999999776554443333222111 111123467


Q ss_pred             HHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          196 NSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                      ..+.++|.+||+.+|.+|||+.++++||||
T Consensus       227 ~~~~~~i~~~l~~~P~~Rps~~~il~~~~~  256 (256)
T cd06612         227 PEFNDFVKKCLVKDPEERPSAIQLLQHPFI  256 (256)
T ss_pred             HHHHHHHHHHHhcChhhCcCHHHHhcCCCC
Confidence            899999999999999999999999999997

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.98  E-value=6.3e-32  Score=253.54  Aligned_cols=183  Identities=28%  Similarity=0.494  Sum_probs=143.1

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|+|||. |+|.+++.+. .+.+++..+..++.||+.||.|||++||+||||||+||+++   .++.++|+|||++.
T Consensus        73 ~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~---~~~~~~l~dfg~~~  147 (284)
T cd07839          73 KLTLVFEYCD-QDLKKYFDSC-NGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLIN---KNGELKLADFGLAR  147 (284)
T ss_pred             ceEEEEecCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEc---CCCcEEECccchhh
Confidence            3468999997 5888877554 36799999999999999999999999999999999999998   47889999999987


Q ss_pred             eccCCC-cccccccCCcccccccccCC--CCCCcchHHHHHHHHHHhhCCCCCCC-CChhHHHHHHHhcC----------
Q 014171          118 FIKPGK-KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNK----------  183 (429)
Q Consensus       118 ~~~~~~-~~~~~~g~~~y~aPE~~~~~--~~~~~DiwslG~il~~l~~g~~pf~~-~~~~~~~~~i~~~~----------  183 (429)
                      ...... ......+++.|+|||.+.+.  ++.++|+||+||++|+|++|..|+.. .+.......+....          
T Consensus       148 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (284)
T cd07839         148 AFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPG  227 (284)
T ss_pred             ccCCCCCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHH
Confidence            654332 22344678899999988653  47899999999999999999988644 33333333332110          


Q ss_pred             ----CCC------C-----CCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          184 ----PDF------R-----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       184 ----~~~------~-----~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                          ...      +     ....+.++++++++|.+||+.||.+|||++++++||||
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~h~~f  284 (284)
T cd07839         228 VSKLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQHPYF  284 (284)
T ss_pred             hhhcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhcCCCC
Confidence                000      0     01123578899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.98  E-value=1.5e-31  Score=251.07  Aligned_cols=183  Identities=27%  Similarity=0.422  Sum_probs=146.9

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+||||+. ++|..++.......+++..+..++.|++.||.|||+.|++|+||+|+||+++   .++.++|+|||.+..
T Consensus        74 ~~~v~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~---~~~~~~l~dfg~~~~  149 (284)
T cd07860          74 LYLVFEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFGLARA  149 (284)
T ss_pred             EEEEeeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEEeeccchhh
Confidence            468999996 6899988766667899999999999999999999999999999999999998   578899999999876


Q ss_pred             ccCCC-cccccccCCcccccccccCC--CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCC----------
Q 014171          119 IKPGK-KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD----------  185 (429)
Q Consensus       119 ~~~~~-~~~~~~g~~~y~aPE~~~~~--~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~----------  185 (429)
                      ..... ......+++.|+|||.+.+.  .+.++|+||+||++|+|+||+.||.+.+.......+......          
T Consensus       150 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
T cd07860         150 FGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVT  229 (284)
T ss_pred             cccCccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhh
Confidence            54322 22334568899999988643  477899999999999999999999877665444333321110          


Q ss_pred             --------CCC-------CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          186 --------FRR-------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       186 --------~~~-------~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                              ++.       ...+.++..++++|.+||+.||.+|||++++++||||
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~f  284 (284)
T cd07860         230 SLPDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALAHPFF  284 (284)
T ss_pred             HHHHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhcCCCC
Confidence                    000       0123468889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.98  E-value=1.3e-31  Score=265.58  Aligned_cols=185  Identities=23%  Similarity=0.355  Sum_probs=143.0

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..++|||++. |+|.+++... ...+++.++..++.||+.||.|||++||+||||||+|||++   ..+.++|+|||+++
T Consensus       234 ~~~lv~e~~~-~~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~---~~~~vkL~DFGla~  308 (461)
T PHA03211        234 LTCLVLPKYR-SDLYTYLGAR-LRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVN---GPEDICLGDFGAAC  308 (461)
T ss_pred             EEEEEEEccC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEEC---CCCCEEEcccCCce
Confidence            4568999995 7998888654 35799999999999999999999999999999999999998   47889999999997


Q ss_pred             eccCCC---cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCC--------hhHHHHHHHhcCC-
Q 014171          118 FIKPGK---KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKT--------EDGIFKEVLRNKP-  184 (429)
Q Consensus       118 ~~~~~~---~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~--------~~~~~~~i~~~~~-  184 (429)
                      ......   ......||+.|+|||++.+ .++.++||||+||++|+|++|..|+....        ...+...+..... 
T Consensus       309 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~  388 (461)
T PHA03211        309 FARGSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVH  388 (461)
T ss_pred             ecccccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccc
Confidence            654322   1234578999999999865 46889999999999999999887654322        1222222222111 


Q ss_pred             --CC------------------------CCCCCC---CCCHHHHHHHHHhccCCccCcCCHHHHhCCCcccc
Q 014171          185 --DF------------------------RRKPWP---SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE  227 (429)
Q Consensus       185 --~~------------------------~~~~~~---~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~  227 (429)
                        .+                        ....|.   .++.++.+||.+||+.||.+|||+.|+|+||||+.
T Consensus       389 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~hp~f~~  460 (461)
T PHA03211        389 VDEFPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRLPLFQS  460 (461)
T ss_pred             cccCCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhCcccCC
Confidence              01                        111121   35668999999999999999999999999999975

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.98  E-value=1.6e-31  Score=250.23  Aligned_cols=183  Identities=26%  Similarity=0.376  Sum_probs=150.0

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||.||+|.+++...  +.+++..+..++.|++.||.|||+.+|+||||||+||+++   .++.++|+|||++
T Consensus        70 ~~~~~v~e~~~g~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~---~~~~~kl~dfg~~  144 (278)
T cd05606          70 DKLSFILDLMNGGDLHYHLSQH--GVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISDLGLA  144 (278)
T ss_pred             CEEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEEC---CCCCEEEccCcCc
Confidence            3457899999999999888543  6799999999999999999999999999999999999998   4788999999998


Q ss_pred             eeccCCCcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCCh---hHHHHHHHhcCCCCCCCCC
Q 014171          117 DFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTE---DGIFKEVLRNKPDFRRKPW  191 (429)
Q Consensus       117 ~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~---~~~~~~i~~~~~~~~~~~~  191 (429)
                      ....... .....|+..|+|||.+.+  .++.++|+||+||++|+|++|+.||.+...   ............    ..+
T Consensus       145 ~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~  219 (278)
T cd05606         145 CDFSKKK-PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAV----ELP  219 (278)
T ss_pred             cccCccC-CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhccCC----CCC
Confidence            7654322 234578999999999863  358899999999999999999999976632   222222222222    222


Q ss_pred             CCCCHHHHHHHHHhccCCccCcC-----CHHHHhCCCccccCC
Q 014171          192 PSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREGG  229 (429)
Q Consensus       192 ~~~~~~~~~li~~~l~~dp~~R~-----s~~e~l~h~~~~~~~  229 (429)
                      ..++..+.+++.+||..+|.+||     ++.++++||||+...
T Consensus       220 ~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~~~~~~~~~  262 (278)
T cd05606         220 DSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKEHPFFRSLD  262 (278)
T ss_pred             CcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHhCccccCCC
Confidence            35689999999999999999999     999999999998854

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.97  E-value=2e-31  Score=252.02  Aligned_cols=190  Identities=27%  Similarity=0.372  Sum_probs=151.7

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+||||+ +|+|.+++.... ..+++..+..++.||++||.|||++||+|+||+|+||+++   .++.++|+|||++.
T Consensus        76 ~~~lv~e~~-~~~L~~~i~~~~-~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~---~~~~~~l~dfg~~~  150 (298)
T cd07841          76 NINLVFEFM-ETDLEKVIKDKS-IVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIA---SDGVLKLADFGLAR  150 (298)
T ss_pred             EEEEEEccc-CCCHHHHHhccC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEc---CCCCEEEccceeee
Confidence            346899999 899999885542 3799999999999999999999999999999999999999   47889999999998


Q ss_pred             eccCCC-cccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCC------
Q 014171          118 FIKPGK-KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR------  188 (429)
Q Consensus       118 ~~~~~~-~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~------  188 (429)
                      ...... ......+++.|.|||.+.+  .++.++|+||+||++|+|++|.+||.+.+.......+.........      
T Consensus       151 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (298)
T cd07841         151 SFGSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWPGV  230 (298)
T ss_pred             eccCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHHHHHHHHcCCCchhhhhhc
Confidence            765432 2233456788999998853  4578999999999999999998888777665555444322110000      


Q ss_pred             ------------------CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCCC
Q 014171          189 ------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS  232 (429)
Q Consensus       189 ------------------~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~~  232 (429)
                                        ..+...+..+.++|.+||+.+|++|||+.++++|+||++...+.
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~~~~~~~~~~~  292 (298)
T cd07841         231 TSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEHPYFSNDPAPT  292 (298)
T ss_pred             ccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhCccccCCCCCC
Confidence                              01134578899999999999999999999999999999976543

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.97  E-value=2.4e-31  Score=245.66  Aligned_cols=182  Identities=21%  Similarity=0.447  Sum_probs=154.2

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|+||+.+|+|.+++.......+++.++..++.|++.||.|||++|++|+||+|+||+++   .++.++|+|||.+.
T Consensus        73 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~---~~~~~~l~d~~~~~  149 (256)
T cd08218          73 NLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLT---KDGTIKLGDFGIAR  149 (256)
T ss_pred             eEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc---CCCCEEEeecccee
Confidence            457899999999999998766556789999999999999999999999999999999999998   47789999999987


Q ss_pred             eccCCCc-ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~~~~~-~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      ....... .....|++.|+|||.+.+ ..+.++|+||+||++++|++|+.||...........+..+....   ....++
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  226 (256)
T cd08218         150 VLNSTVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNMKNLVLKIIRGSYPP---VSSHYS  226 (256)
T ss_pred             ecCcchhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCHHHHHHHHhcCCCCC---CcccCC
Confidence            6644322 223467889999999864 44789999999999999999999998877777776666554321   224578


Q ss_pred             HHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          196 NSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                      .++.++|.+||+.+|.+||++.++++||||
T Consensus       227 ~~~~~li~~~l~~~p~~Rp~~~~vl~~~~~  256 (256)
T cd08218         227 YDLRNLVSQLFKRNPRDRPSVNSILEKNFI  256 (256)
T ss_pred             HHHHHHHHHHhhCChhhCcCHHHHhhCcCC
Confidence            999999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=1.4e-31  Score=262.79  Aligned_cols=186  Identities=19%  Similarity=0.302  Sum_probs=145.5

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||++. ++|.+++.  ....+++..+..++.||+.||.|||++||+||||||+||+++   ..+.++|+|||++.
T Consensus       160 ~~~lv~e~~~-~~l~~~l~--~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~---~~~~~~l~DfG~a~  233 (392)
T PHA03207        160 TVCMVMPKYK-CDLFTYVD--RSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLD---EPENAVLGDFGAAC  233 (392)
T ss_pred             EEEEEehhcC-CCHHHHHH--hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEc---CCCCEEEccCcccc
Confidence            3467999996 68988883  346899999999999999999999999999999999999998   57899999999987


Q ss_pred             eccCCCc---ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChh---HHHHHHHhc----CCCC
Q 014171          118 FIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED---GIFKEVLRN----KPDF  186 (429)
Q Consensus       118 ~~~~~~~---~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~---~~~~~i~~~----~~~~  186 (429)
                      .......   .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+....   ..+..+...    ...+
T Consensus       234 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~  313 (392)
T PHA03207        234 KLDAHPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEF  313 (392)
T ss_pred             ccCcccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCcccc
Confidence            6543322   234578999999999874 4688999999999999999999999775432   112222111    0000


Q ss_pred             CC------------------C--CC------CCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          187 RR------------------K--PW------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       187 ~~------------------~--~~------~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      +.                  +  .+      ..++.++.++|.+||..||.+|||+.++|+||||+...
T Consensus       314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~p~f~~~~  382 (392)
T PHA03207        314 PQNGSTNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSLPLFTKEP  382 (392)
T ss_pred             CCccchhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhCchhhccc
Confidence            00                  0  00      13467889999999999999999999999999998753

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.97  E-value=2.4e-31  Score=247.01  Aligned_cols=183  Identities=25%  Similarity=0.342  Sum_probs=149.0

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|+||+.||+|.+++.+.  +.+++..+..++.|++.||.|||+.||+|+||+|+||+++   .++.++|+|||.+
T Consensus        75 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~  149 (265)
T cd06631          75 NTISIFMEFVPGGSISSILNRF--GPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLM---PNGIIKLIDFGCA  149 (265)
T ss_pred             CeEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEEC---CCCeEEeccchhh
Confidence            3456899999999999998554  5789999999999999999999999999999999999998   4788999999988


Q ss_pred             eeccCC-------CcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCC
Q 014171          117 DFIKPG-------KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR  188 (429)
Q Consensus       117 ~~~~~~-------~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~  188 (429)
                      ......       .......++..|+|||.+.+ .++.++|+||+||++|+|++|..||...........+...... .+
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~  228 (265)
T cd06631         150 RRLAWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLAAMFYIGAHRGL-MP  228 (265)
T ss_pred             HhhhhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHHHHHHhhhccCC-CC
Confidence            754321       11233467889999999865 4578999999999999999999999776554444333332221 22


Q ss_pred             CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          189 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       189 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                      .....++.++.++|.+||..+|.+||++.++++||||
T Consensus       229 ~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~  265 (265)
T cd06631         229 RLPDSFSAAAIDFVTSCLTRDQHERPSALQLLRHDFL  265 (265)
T ss_pred             CCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence            2334678999999999999999999999999999997

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.97  E-value=2.5e-31  Score=249.04  Aligned_cols=182  Identities=32%  Similarity=0.493  Sum_probs=147.2

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..++|+||+. |+|.+.+...+ ..+++..+..++.|++.||.|||++|++||||+|+||+++   . +.+||+|||.+.
T Consensus        74 ~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~---~-~~~kl~dfg~~~  147 (282)
T cd07831          74 RLALVFELMD-MNLYELIKGRK-RPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIK---D-DILKLADFGSCR  147 (282)
T ss_pred             cEEEEEecCC-ccHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEc---C-CCeEEEeccccc
Confidence            3478999997 58888876543 5789999999999999999999999999999999999998   3 899999999998


Q ss_pred             eccCCCcccccccCCccccccccc--CCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCC-----------
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP-----------  184 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~--~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~-----------  184 (429)
                      ............++..|+|||.+.  +..+.++|+||+||++|+|++|.+||.+.+..+....+.....           
T Consensus       148 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (282)
T cd07831         148 GIYSKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFR  227 (282)
T ss_pred             ccccCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhc
Confidence            765544444556889999999764  2358899999999999999999999988776554444332110           


Q ss_pred             -------CCCCC-------CCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          185 -------DFRRK-------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       185 -------~~~~~-------~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                             .++..       ..+.++..++++|.+||+.+|.+||+++++++||||
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~~~~  282 (282)
T cd07831         228 KSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALRHPYF  282 (282)
T ss_pred             ccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhhCCCC
Confidence                   01100       113468899999999999999999999999999997

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.97  E-value=1.5e-31  Score=253.85  Aligned_cols=184  Identities=27%  Similarity=0.455  Sum_probs=153.2

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+||||++||+|.+++...  +.+++..+..++.|++.||.|||++|++||||||+||+++   ..+.++|+|||+++.
T Consensus        76 ~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~---~~~~~~l~dfg~~~~  150 (305)
T cd05609          76 LCMVMEYVEGGDCATLLKNI--GALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLIT---SMGHIKLTDFGLSKI  150 (305)
T ss_pred             EEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEEC---CCCCEEEeeCCCccc
Confidence            46899999999999998554  5799999999999999999999999999999999999998   578999999998763


Q ss_pred             ccCCC----------------cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHh
Q 014171          119 IKPGK----------------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR  181 (429)
Q Consensus       119 ~~~~~----------------~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~  181 (429)
                      .....                ......++..|+|||.+.. .++.++|+||+||++|+|++|..||.+....+....+..
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~  230 (305)
T cd05609         151 GLMSLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVIS  230 (305)
T ss_pred             cCcCccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            21000                0112356788999998754 468899999999999999999999998888777777766


Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCC---HHHHhCCCccccC
Q 014171          182 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT---AAQALSHPWVREG  228 (429)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s---~~e~l~h~~~~~~  228 (429)
                      .....+... ..++.+++++|.+||+.+|.+||+   +.++++||||...
T Consensus       231 ~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~~~~~~~  279 (305)
T cd05609         231 DDIEWPEGD-EALPADAQDLISRLLRQNPLERLGTGGAFEVKQHRFFLGL  279 (305)
T ss_pred             cccCCCCcc-ccCCHHHHHHHHHHhccChhhccCccCHHHHHhCccccCC
Confidence            654444332 257899999999999999999998   7899999999764

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.97  E-value=1e-31  Score=255.88  Aligned_cols=189  Identities=22%  Similarity=0.307  Sum_probs=148.3

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|++||||.+|+|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++   .++.++|+|||.+.
T Consensus        73 ~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~---~~~~~kl~d~~~~~  149 (314)
T cd08216          73 ELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLS---GDGKVVLSGLRYSV  149 (314)
T ss_pred             eEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEe---cCCceEEecCccce
Confidence            357899999999999999776666799999999999999999999999999999999999998   47889999999887


Q ss_pred             eccCCCc--------ccccccCCcccccccccC---CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCC
Q 014171          118 FIKPGKK--------FQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF  186 (429)
Q Consensus       118 ~~~~~~~--------~~~~~g~~~y~aPE~~~~---~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~  186 (429)
                      .......        .....++..|+|||.+.+   .++.++|+||+||++|+|++|+.||..............+....
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  229 (314)
T cd08216         150 SMIKHGKRQRVVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPC  229 (314)
T ss_pred             eeccccccccccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCcc
Confidence            5532211        123456778999999864   35789999999999999999999998765444332222211000


Q ss_pred             ------------------------------CCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          187 ------------------------------RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       187 ------------------------------~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                                                    .......++.++.+++.+||+.||++|||++++++||||+...
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~p~~~~~~  302 (314)
T cd08216         230 LLDKSTYPLYEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNHSFFKQCK  302 (314)
T ss_pred             ccccCchhhhcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcCchHhhhc
Confidence                                          0000012346788999999999999999999999999998654

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.97  E-value=1.9e-31  Score=252.20  Aligned_cols=189  Identities=29%  Similarity=0.477  Sum_probs=152.5

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+||||++||+|.+++.+   ..+++.++..++.|++.||.|||+.|++||||||+||+++   .++.++|+|||.+.
T Consensus        90 ~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~---~~~~~~l~Dfg~~~  163 (297)
T cd06656          90 ELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGFCA  163 (297)
T ss_pred             EEEEeecccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEECcCccce
Confidence            35789999999999998844   4689999999999999999999999999999999999998   57889999999987


Q ss_pred             eccCCCc-ccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~~~~~-~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      ....... .....+++.|+|||.+.+. .+.++|+||+||++|++++|..||.+.+.......+.... .........++
T Consensus       164 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~~~~~-~~~~~~~~~~~  242 (297)
T cd06656         164 QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNG-TPELQNPERLS  242 (297)
T ss_pred             EccCCccCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeeeccCC-CCCCCCccccC
Confidence            6644332 2344678899999998654 5789999999999999999999997765543332222221 11111234578


Q ss_pred             HHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCCCC
Q 014171          196 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE  233 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~~~  233 (429)
                      ..+++++.+||..+|.+||++.++++||||+.......
T Consensus       243 ~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~~~~  280 (297)
T cd06656         243 AVFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLSS  280 (297)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcCchhcccccccc
Confidence            89999999999999999999999999999998765443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.97  E-value=1.9e-31  Score=248.07  Aligned_cols=182  Identities=27%  Similarity=0.420  Sum_probs=145.6

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+||||+.+|+|.+++...  +.+++..+..++.|++.||.|||+.||+||||+|+||+++   .++.++|+|||++.
T Consensus        80 ~~~iv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~---~~~~~~l~dfg~~~  154 (267)
T cd06646          80 KLWICMEYCGGGSLQDIYHVT--GPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLT---DNGDVKLADFGVAA  154 (267)
T ss_pred             EEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC---CCCCEEECcCccce
Confidence            457899999999999988543  6789999999999999999999999999999999999998   57789999999998


Q ss_pred             eccCCC-cccccccCCccccccccc----CCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCC-CCC
Q 014171          118 FIKPGK-KFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR-KPW  191 (429)
Q Consensus       118 ~~~~~~-~~~~~~g~~~y~aPE~~~----~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~-~~~  191 (429)
                      ...... ......+++.|+|||.+.    ..++.++|+||+||++|+|++|+.||...........+.......+. ...
T Consensus       155 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (267)
T cd06646         155 KITATIAKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRALFLMSKSNFQPPKLKDK  234 (267)
T ss_pred             eecccccccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhhheeeecCCCCCCCCccc
Confidence            664322 223456888999999874    23577899999999999999999999765544333222222211111 111


Q ss_pred             CCCCHHHHHHHHHhccCCccCcCCHHHHhCCCc
Q 014171          192 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW  224 (429)
Q Consensus       192 ~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~  224 (429)
                      ..++..+.++|.+||..+|.+|||++++++|+|
T Consensus       235 ~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l~  267 (267)
T cd06646         235 TKWSSTFHNFVKISLTKNPKKRPTAERLLTHLF  267 (267)
T ss_pred             cccCHHHHHHHHHHhhCChhhCcCHHHHhcCCC
Confidence            346889999999999999999999999999987

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.97  E-value=2.2e-31  Score=249.07  Aligned_cols=185  Identities=25%  Similarity=0.422  Sum_probs=152.2

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+||||+.||+|.+++..   +.+++.++..++.|++.||.|||+++++|+||+|+||+++   .++.++|+|||++
T Consensus        75 ~~~~lv~e~~~~~~L~~~i~~---~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~---~~~~~~l~dfg~~  148 (277)
T cd06640          75 TKLWIIMEYLGGGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLS---EQGDVKLADFGVA  148 (277)
T ss_pred             CEEEEEEecCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEc---CCCCEEEcccccc
Confidence            345789999999999998843   4689999999999999999999999999999999999998   4778999999999


Q ss_pred             eeccCCCc-ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DFIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~~~~~~~-~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      ........ .....++..|+|||.+.+ ..+.++|+||+||++|+|++|+.||...........+....   ++.....+
T Consensus       149 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~---~~~~~~~~  225 (277)
T cd06640         149 GQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLIPKNN---PPTLTGEF  225 (277)
T ss_pred             eeccCCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhHhhhhhcCC---CCCCchhh
Confidence            76654332 233467889999999865 45889999999999999999999998776655554443222   22223456


Q ss_pred             CHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                      +..+.+++.+||+.+|.+||+++++++|+||.....
T Consensus       226 ~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~  261 (277)
T cd06640         226 SKPFKEFIDACLNKDPSFRPTAKELLKHKFIVKNAK  261 (277)
T ss_pred             hHHHHHHHHHHcccCcccCcCHHHHHhChHhhhcch
Confidence            788999999999999999999999999999977643

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.97  E-value=3.3e-31  Score=248.22  Aligned_cols=181  Identities=24%  Similarity=0.392  Sum_probs=145.1

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...++||||+++|+|..+      ..+++..+..++.|++.||.|||+.||+|+||||+||+++   .++.++|+|||++
T Consensus        72 ~~~~lv~e~~~~~~l~~~------~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~---~~~~~~l~dfg~~  142 (279)
T cd06619          72 NRISICTEFMDGGSLDVY------RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVN---TRGQVKLCDFGVS  142 (279)
T ss_pred             CEEEEEEecCCCCChHHh------hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEEC---CCCCEEEeeCCcc
Confidence            345689999999998643      3578999999999999999999999999999999999998   5789999999998


Q ss_pred             eeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChh-------HHHHHHHhcCCCCCC
Q 014171          117 DFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED-------GIFKEVLRNKPDFRR  188 (429)
Q Consensus       117 ~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-------~~~~~i~~~~~~~~~  188 (429)
                      ...... ......|+..|+|||.+.+ .++.++|+||+||++|+|++|+.||......       .....+.....  +.
T Consensus       143 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~--~~  219 (279)
T cd06619         143 TQLVNS-IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDP--PV  219 (279)
T ss_pred             eecccc-cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCC--CC
Confidence            765433 2344578999999999865 4588999999999999999999999653221       12222222211  11


Q ss_pred             CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          189 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       189 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      ......++++++++.+||+.+|.+||+++++++||||+...
T Consensus       220 ~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~~~~~~~~  260 (279)
T cd06619         220 LPVGQFSEKFVHFITQCMRKQPKERPAPENLMDHPFIVQYN  260 (279)
T ss_pred             CCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcCccccccc
Confidence            12245788999999999999999999999999999998763

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.97  E-value=3e-31  Score=252.19  Aligned_cols=186  Identities=25%  Similarity=0.400  Sum_probs=150.8

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|||||. ++|.+++...+ ..+++.++..++.|++.||.|||++|++||||||+||+++   ..+.++|+|||.+..
T Consensus        83 ~~lv~e~~~-~~l~~~l~~~~-~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~---~~~~~kL~dfg~~~~  157 (309)
T cd07845          83 IFLVMEYCE-QDLASLLDNMP-TPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLT---DKGCLKIADFGLART  157 (309)
T ss_pred             EEEEEecCC-CCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCCEEECccceeee
Confidence            478999997 58888876543 6799999999999999999999999999999999999998   578999999999987


Q ss_pred             ccCCC-cccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCC----------
Q 014171          119 IKPGK-KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD----------  185 (429)
Q Consensus       119 ~~~~~-~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~----------  185 (429)
                      ..... ......+++.|+|||.+.+  .++.++|+||+||++|+|++|++||.+.+.......+......          
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (309)
T cd07845         158 YGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGFS  237 (309)
T ss_pred             cCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhhh
Confidence            65432 2233345788999999854  3588999999999999999999999888877776665542111          


Q ss_pred             ---------CCCCC-------CCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          186 ---------FRRKP-------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       186 ---------~~~~~-------~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                               .....       .+..++.+.++|.+||+.||.+|||++++++||||+...
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h~~f~~~~  297 (309)
T cd07845         238 DLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALESSYFKEKP  297 (309)
T ss_pred             cccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcChhhccCC
Confidence                     00000       123578899999999999999999999999999998754

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.97  E-value=4.3e-31  Score=249.30  Aligned_cols=185  Identities=26%  Similarity=0.425  Sum_probs=147.5

Q ss_pred             ceeEeeecCCCChHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           39 KLRRIRLCEGGELLDRILAKK---DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~---~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      .|+|||||.+ +|.+++....   ...+++..+..++.||+.||.|||++||+||||+|+||+++.  .++.++|+|||.
T Consensus        81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~--~~~~~kl~dfg~  157 (295)
T cd07837          81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDK--QKGLLKIADLGL  157 (295)
T ss_pred             EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEec--CCCeEEEeeccc
Confidence            4789999985 8988886543   246899999999999999999999999999999999999983  368899999999


Q ss_pred             ceeccCC-CcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCC------
Q 014171          116 SDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF------  186 (429)
Q Consensus       116 a~~~~~~-~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~------  186 (429)
                      +...... .......+++.|+|||.+.+  .++.++|+||+|+++|+|++|..||.+.+.......+.......      
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (295)
T cd07837         158 GRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWP  237 (295)
T ss_pred             ceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhCc
Confidence            8765332 22233456888999998854  35889999999999999999999998877665554443321000      


Q ss_pred             --------------C----CCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccc
Q 014171          187 --------------R----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR  226 (429)
Q Consensus       187 --------------~----~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~  226 (429)
                                    .    ....+.++..+.++|.+||..||.+||++++++.||||+
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~~~~~~  295 (295)
T cd07837         238 GVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALTHPYFD  295 (295)
T ss_pred             chhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhcCCCcC
Confidence                          0    001245788999999999999999999999999999985

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.97  E-value=6.1e-31  Score=247.17  Aligned_cols=187  Identities=29%  Similarity=0.576  Sum_probs=155.1

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|+||+.|++|.+++..   ..+++..+..++.|++.||.|||++|++||||+|+||+++   .++.++|+|||.+
T Consensus        89 ~~~~~v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~~l~d~g~~  162 (285)
T cd06648          89 DELWVVMEFLEGGALTDIVTH---TRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLT---SDGRVKLSDFGFC  162 (285)
T ss_pred             CeEEEEEeccCCCCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEc---CCCcEEEcccccc
Confidence            446789999999999998854   4689999999999999999999999999999999999998   5789999999987


Q ss_pred             eeccCCC-cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~~~~~~-~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      ....... ......|++.|+|||.+.+ .++.++|+||+||++|+|++|+.||...+.......+......... ....+
T Consensus       163 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~  241 (285)
T cd06648         163 AQVSKEVPRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPLQAMKRIRDNLPPKLK-NLHKV  241 (285)
T ss_pred             hhhccCCcccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHhcCCCCCc-ccccC
Confidence            6543322 2233468899999999865 4588999999999999999999999887766666666554322211 12347


Q ss_pred             CHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                      +..+.+++.+||..+|.+||++.++++|+||+....
T Consensus       242 ~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~  277 (285)
T cd06648         242 SPRLRSFLDRMLVRDPAQRATAAELLNHPFLAKAGP  277 (285)
T ss_pred             CHHHHHHHHHHcccChhhCcCHHHHccCcccccCCC
Confidence            889999999999999999999999999999988654

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.97  E-value=3.6e-31  Score=251.46  Aligned_cols=182  Identities=27%  Similarity=0.428  Sum_probs=142.5

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|||||. ++|.+.+... ...+++.++..++.||+.||.|||++|++|+||||+||+++   .++.+||+|||.+..
T Consensus        94 ~~lv~e~~~-~~l~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~~~  168 (310)
T cd07865          94 FYLVFEFCE-HDLAGLLSNK-NVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILIT---KDGILKLADFGLARA  168 (310)
T ss_pred             EEEEEcCCC-cCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEC---CCCcEEECcCCCccc
Confidence            478999997 5888777543 35789999999999999999999999999999999999998   578999999999876


Q ss_pred             ccCCCc-----ccccccCCcccccccccCC--CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCC
Q 014171          119 IKPGKK-----FQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW  191 (429)
Q Consensus       119 ~~~~~~-----~~~~~g~~~y~aPE~~~~~--~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  191 (429)
                      ......     .....++..|+|||.+.+.  ++.++|+||+|+++|+|++|..||.+.+.......+......++...+
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (310)
T cd07865         169 FSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVW  248 (310)
T ss_pred             ccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhc
Confidence            543221     1234567889999988643  478999999999999999999999877665444333321111111100


Q ss_pred             ----------------------------CCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          192 ----------------------------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       192 ----------------------------~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                                                  ...+..++++|.+||+.||.+|||++++++||||
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~h~~f  310 (310)
T cd07865         249 PGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALNHDFF  310 (310)
T ss_pred             ccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhcCCCC
Confidence                                        0125678899999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.97  E-value=1.4e-31  Score=247.64  Aligned_cols=179  Identities=28%  Similarity=0.474  Sum_probs=149.4

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|+||+.|++|.+++...  ..+++..+..++.|+++||.|||++|++|+||+|+||+++   ..+.++|+|||.+..
T Consensus        75 ~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~---~~~~~~l~d~~~~~~  149 (258)
T cd05578          75 MYLVVDLLLGGDLRYHLSQK--VKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLD---EQGHVHITDFNIATK  149 (258)
T ss_pred             EEEEEeCCCCCCHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEc---CCCCEEEeecccccc
Confidence            46799999999999988554  6899999999999999999999999999999999999998   578899999999887


Q ss_pred             ccCCCcccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCCCCCCCCh--hHHHHHHHhcCCCCCCCCCCCCC
Q 014171          119 IKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTE--DGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       119 ~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      ...........|+..|+|||.+.+. .+.++|+||+|+++|+|++|..||...+.  ..........   ......+.++
T Consensus       150 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~  226 (258)
T cd05578         150 VTPDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTIRDQIRAKQET---ADVLYPATWS  226 (258)
T ss_pred             cCCCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccHHHHHHHHhcc---ccccCcccCc
Confidence            6554444556788899999998654 58899999999999999999999987764  2222222221   1222234578


Q ss_pred             HHHHHHHHHhccCCccCcCCH--HHHhCCCcc
Q 014171          196 NSAKDFVKKLLVKDPRARLTA--AQALSHPWV  225 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~--~e~l~h~~~  225 (429)
                      ..+.++|.+||+.||.+||++  +++++||||
T Consensus       227 ~~~~~~i~~~l~~~p~~R~~~~~~~l~~~~~~  258 (258)
T cd05578         227 TEAIDAINKLLERDPQKRLGDNLKDLKNHPYF  258 (258)
T ss_pred             HHHHHHHHHHccCChhHcCCccHHHHhcCCCC
Confidence            999999999999999999999  999999997

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.97  E-value=3.5e-31  Score=246.18  Aligned_cols=180  Identities=26%  Similarity=0.413  Sum_probs=145.4

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .++|+||+.+++|.+++...  +.+++..+..++.|++.||.|||+++|+||||+|+||+++   .++.++|+|||++..
T Consensus        81 ~~l~~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~---~~~~~~l~dfg~~~~  155 (266)
T cd06651          81 LTIFMEYMPGGSVKDQLKAY--GALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRD---SAGNVKLGDFGASKR  155 (266)
T ss_pred             EEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC---CCCCEEEccCCCccc
Confidence            46799999999999998654  5689999999999999999999999999999999999998   477899999999876


Q ss_pred             ccCC----CcccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          119 IKPG----KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       119 ~~~~----~~~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      ....    .......++..|+|||.+.+. .+.++|+||+||++|+|++|+.||...........+.....  .+.....
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~~  233 (266)
T cd06651         156 LQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMAAIFKIATQPT--NPQLPSH  233 (266)
T ss_pred             cccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHHHHHHHhcCCC--CCCCchh
Confidence            5321    112234578899999998654 58899999999999999999999977655444444333221  1122235


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhCCCccc
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR  226 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~  226 (429)
                      +++.+++++ +||..+|.+||+++++++||||+
T Consensus       234 ~~~~~~~li-~~~~~~p~~Rp~~~eil~hp~~~  265 (266)
T cd06651         234 ISEHARDFL-GCIFVEARHRPSAEELLRHPFAQ  265 (266)
T ss_pred             cCHHHHHHH-HHhcCChhhCcCHHHHhcCcccc
Confidence            688899999 67778999999999999999986

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.97  E-value=1.5e-31  Score=251.57  Aligned_cols=189  Identities=22%  Similarity=0.323  Sum_probs=146.9

Q ss_pred             cccceeEeeecCCCChHHH---HHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCcEEEeecCCCCCEEEe
Q 014171           36 PLRKLRRIRLCEGGELLDR---ILAKKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDSSLKAT  111 (429)
Q Consensus        36 ~~~~~lv~e~~~gg~L~~~---l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~-~i~H~dikp~Nil~~~~~~~~~~kL~  111 (429)
                      +...++||||+.+ ++.++   +.......+++..+..++.|++.||+|||+. |++||||||+||+++   ..+.++|+
T Consensus        75 ~~~~~~~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~---~~~~~kl~  150 (288)
T cd06616          75 EGDCWICMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLD---RNGNIKLC  150 (288)
T ss_pred             CCcEEEEEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEc---cCCcEEEe
Confidence            3446789999874 55443   3333446799999999999999999999975 999999999999998   47789999


Q ss_pred             ecccceeccCCCcccccccCCcccccccccCC----CCCCcchHHHHHHHHHHhhCCCCCCCCCh-hHHHHHHHhcC-CC
Q 014171          112 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK----SGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLRNK-PD  185 (429)
Q Consensus       112 Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~~----~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~i~~~~-~~  185 (429)
                      |||++.............|++.|+|||.+.+.    ++.++|+||+||++|+|++|+.||..... .+....+..+. +.
T Consensus       151 dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~  230 (288)
T cd06616         151 DFGISGQLVDSIAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNSVFDQLTQVVKGDPPI  230 (288)
T ss_pred             ecchhHHhccCCccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcchHHHHHhhhcCCCCCc
Confidence            99998766544443445788999999998643    58899999999999999999999965542 12222222222 22


Q ss_pred             CCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          186 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       186 ~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      ........++.++.+||.+||+.+|.+|||++++++||||+..
T Consensus       231 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~~~~~~~  273 (288)
T cd06616         231 LSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEHPFIKDY  273 (288)
T ss_pred             CCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcChhhhch
Confidence            2222234578999999999999999999999999999999874

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.97  E-value=6.1e-31  Score=247.13  Aligned_cols=183  Identities=28%  Similarity=0.440  Sum_probs=147.0

Q ss_pred             ceeEeeecCCCChHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           39 KLRRIRLCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      .|+|||||+||+|.+++...  .+..+++..+..++.|++.||.|||+++++||||||+||+++   ..+.++|+|||.+
T Consensus        95 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~---~~~~~kl~dfg~~  171 (286)
T cd06638          95 LWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLT---TEGGVKLVDFGVS  171 (286)
T ss_pred             EEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEEC---CCCCEEEccCCce
Confidence            46899999999999987532  335689999999999999999999999999999999999998   4678999999998


Q ss_pred             eeccCCC-cccccccCCccccccccc------CCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCC
Q 014171          117 DFIKPGK-KFQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK  189 (429)
Q Consensus       117 ~~~~~~~-~~~~~~g~~~y~aPE~~~------~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  189 (429)
                      ....... ......|++.|+|||.+.      ..++.++|+||+||++|+|++|+.||................. ....
T Consensus       172 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~~~~~~~~~~~~-~~~~  250 (286)
T cd06638         172 AQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPMRALFKIPRNPP-PTLH  250 (286)
T ss_pred             eecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchhHHHhhccccCC-Cccc
Confidence            8764332 223457899999999874      2357899999999999999999999977655444333322211 1111


Q ss_pred             CCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          190 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       190 ~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                      .....+..+.++|.+||+.||.+|||+.++++|+||
T Consensus       251 ~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~~~  286 (286)
T cd06638         251 QPELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHVFI  286 (286)
T ss_pred             CCCCcCHHHHHHHHHHccCCcccCCCHHHHhhcccC
Confidence            122357889999999999999999999999999997

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=4.1e-31  Score=244.85  Aligned_cols=183  Identities=30%  Similarity=0.456  Sum_probs=149.3

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+||||+.+++|.+++... ...+++..+..++.|++.||.|||++|++|+||+|+||+++   .++.++|+|||.+.
T Consensus        74 ~~~l~~e~~~~~~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~---~~~~~~l~d~g~~~  149 (262)
T cd06613          74 KLWIVMEYCGGGSLQDIYQVT-RGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLT---EDGDVKLADFGVSA  149 (262)
T ss_pred             EEEEEEeCCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEEC---CCCCEEECccccch
Confidence            357899999999999988554 25799999999999999999999999999999999999999   57889999999987


Q ss_pred             eccCCC-cccccccCCcccccccccC----CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCC-CCC
Q 014171          118 FIKPGK-KFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR-KPW  191 (429)
Q Consensus       118 ~~~~~~-~~~~~~g~~~y~aPE~~~~----~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~-~~~  191 (429)
                      ...... ......++..|+|||.+.+    .++.++|+||+|+++|+|++|+.||.+.+.......+......... ...
T Consensus       150 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (262)
T cd06613         150 QLTATIAKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLISKSNFPPPKLKDK  229 (262)
T ss_pred             hhhhhhhccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCccccch
Confidence            654332 2334567889999999864    3578899999999999999999999887765555444443221111 112


Q ss_pred             CCCCHHHHHHHHHhccCCccCcCCHHHHhCCCc
Q 014171          192 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW  224 (429)
Q Consensus       192 ~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~  224 (429)
                      ...+.++.+++.+||..+|.+|||+++++.|+|
T Consensus       230 ~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~~~  262 (262)
T cd06613         230 EKWSPVFHDFIKKCLTKDPKKRPTATKLLQHPF  262 (262)
T ss_pred             hhhhHHHHHHHHHHcCCChhhCCCHHHHhcCCC
Confidence            345788999999999999999999999999998

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.97  E-value=2.7e-31  Score=250.57  Aligned_cols=184  Identities=28%  Similarity=0.440  Sum_probs=148.0

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|+||+. ++|.+++.... ..+++..+..++.||+.||.|||++|++|+||||+||+++   .++.++|+|||.+
T Consensus        79 ~~~~lv~e~~~-~~L~~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~---~~~~~~l~d~g~~  153 (293)
T cd07843          79 DKIYMVMEYVE-HDLKSLMETMK-QPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLN---NRGILKICDFGLA  153 (293)
T ss_pred             CcEEEEehhcC-cCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEEC---CCCcEEEeecCce
Confidence            34678999998 59988876543 4699999999999999999999999999999999999998   5788999999998


Q ss_pred             eeccCC-CcccccccCCcccccccccCC--CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCC-------
Q 014171          117 DFIKPG-KKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF-------  186 (429)
Q Consensus       117 ~~~~~~-~~~~~~~g~~~y~aPE~~~~~--~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~-------  186 (429)
                      ...... .......+++.|+|||.+.+.  .+.++|+||+|+++|+|++|.+||...+......++.......       
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~  233 (293)
T cd07843         154 REYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPG  233 (293)
T ss_pred             eeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHH
Confidence            876543 233445678899999988643  4789999999999999999999998777665554443211100       


Q ss_pred             -------------------CCCCCCC--CCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          187 -------------------RRKPWPS--ISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       187 -------------------~~~~~~~--~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                                         ....++.  +++.+.++|.+||+.+|++|||+.|+++||||
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~~~~f  293 (293)
T cd07843         234 FSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALKHPYF  293 (293)
T ss_pred             hhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhcCCCC
Confidence                               0011122  48889999999999999999999999999998

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.97  E-value=1.9e-31  Score=247.64  Aligned_cols=184  Identities=27%  Similarity=0.429  Sum_probs=148.6

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~-~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      ...|+|+||+.+++|.+++...+ ..+++..+..++.|++.||.|||+ .|++|+||+|+||+++   .++.++|+|||.
T Consensus        72 ~~~~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~---~~~~~~l~d~g~  147 (265)
T cd06605          72 GDISICMEYMDGGSLDKILKEVQ-GRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVN---SRGQIKLCDFGV  147 (265)
T ss_pred             CEEEEEEEecCCCcHHHHHHHcc-CCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEEC---CCCCEEEeeccc
Confidence            44578999999999999886543 679999999999999999999999 9999999999999999   478899999999


Q ss_pred             ceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCC-----hhHHHHHHHhcCCCCCCC
Q 014171          116 SDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKT-----EDGIFKEVLRNKPDFRRK  189 (429)
Q Consensus       116 a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~-----~~~~~~~i~~~~~~~~~~  189 (429)
                      +......... ...++..|+|||.+.+ .++.++|+||+|+++|+|++|+.||....     .......+.....   +.
T Consensus       148 ~~~~~~~~~~-~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~---~~  223 (265)
T cd06605         148 SGQLVNSLAK-TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPP---PR  223 (265)
T ss_pred             chhhHHHHhh-cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCC---CC
Confidence            8765432221 2678889999999865 45889999999999999999999996542     2222333333221   11


Q ss_pred             CCCC-CCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          190 PWPS-ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       190 ~~~~-~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      .... ++..++++|.+||..+|.+|||+.+++.||||+..
T Consensus       224 ~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~~~~  263 (265)
T cd06605         224 LPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEHPFIKKY  263 (265)
T ss_pred             CChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhCchhhcc
Confidence            1122 78899999999999999999999999999999764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.97  E-value=2.5e-31  Score=257.46  Aligned_cols=181  Identities=27%  Similarity=0.440  Sum_probs=144.6

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|||||. |+|.+.+..    .+++..+..++.|++.||.|||++||+||||||+||+++   .++.+||+|||.+..
T Consensus        96 ~~lv~e~~~-~~l~~~~~~----~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~---~~~~~kL~Dfg~~~~  167 (353)
T cd07850          96 VYLVMELMD-ANLCQVIQM----DLDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVK---SDCTLKILDFGLART  167 (353)
T ss_pred             EEEEEeccC-CCHHHHHhh----cCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC---CCCCEEEccCcccee
Confidence            478999996 588887732    389999999999999999999999999999999999998   478899999999987


Q ss_pred             ccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcC--------------
Q 014171          119 IKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK--------------  183 (429)
Q Consensus       119 ~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~--------------  183 (429)
                      ...........+++.|+|||.+.+ .++.++|+||+||++|+|++|+.||...+....+..+....              
T Consensus       168 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (353)
T cd07850         168 AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEFMSRLQPT  247 (353)
T ss_pred             CCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhh
Confidence            655444445578899999999865 45889999999999999999999998766544433332210              


Q ss_pred             --------CCCCC---------CC--------CCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcccc
Q 014171          184 --------PDFRR---------KP--------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE  227 (429)
Q Consensus       184 --------~~~~~---------~~--------~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~  227 (429)
                              +....         ..        ....++.++++|.+||+.||++|||+.++|+||||+.
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~~~~~~  316 (353)
T cd07850         248 VRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQHPYINV  316 (353)
T ss_pred             hhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcChhHhh
Confidence                    00000         00        1123567899999999999999999999999999875

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.97  E-value=5.3e-31  Score=249.06  Aligned_cols=188  Identities=29%  Similarity=0.562  Sum_probs=154.8

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|+||+++|+|..++..   ..+++..+..++.|++.||.|||++|++|+||+|+||+++   .++.++|+|||++
T Consensus        91 ~~~~iv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~---~~~~~kL~dfg~~  164 (297)
T cd06659          91 EELWVLMEFLQGGALTDIVSQ---TRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLT---LDGRVKLSDFGFC  164 (297)
T ss_pred             CeEEEEEecCCCCCHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEc---cCCcEEEeechhH
Confidence            345789999999999887633   4689999999999999999999999999999999999998   5789999999998


Q ss_pred             eeccCCC-cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~~~~~~-~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      ....... ......|+..|+|||.+.+ .++.++|+||+||++|+|++|+.||...........+...... ....+..+
T Consensus       165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~  243 (297)
T cd06659         165 AQISKDVPKRKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPP-KLKNAHKI  243 (297)
T ss_pred             hhcccccccccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhccCCC-CccccCCC
Confidence            7554322 2234568899999999864 4588999999999999999999999877766655554433322 22233467


Q ss_pred             CHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA  231 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~  231 (429)
                      +..+.++|.+||+.+|.+||+++++++||||......
T Consensus       244 ~~~l~~~i~~~l~~~P~~Rps~~~ll~~~~~~~~~~~  280 (297)
T cd06659         244 SPVLRDFLERMLTREPQERATAQELLDHPFLLQTGLP  280 (297)
T ss_pred             CHHHHHHHHHHhcCCcccCcCHHHHhhChhhccCCCc
Confidence            8899999999999999999999999999999976543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.97  E-value=3e-31  Score=248.13  Aligned_cols=183  Identities=28%  Similarity=0.426  Sum_probs=149.7

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|+|||.||+|.+++..   +.+++..+..++.|++.||.|||++|++|+||+|+||+++   .++.++|+|||++.
T Consensus        76 ~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~---~~~~~~l~dfg~~~  149 (277)
T cd06642          76 KLWIIMEYLGGGSALDLLKP---GPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLS---EQGDVKLADFGVAG  149 (277)
T ss_pred             ceEEEEEccCCCcHHHHhhc---CCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEe---CCCCEEEccccccc
Confidence            35789999999999988743   5789999999999999999999999999999999999998   57889999999987


Q ss_pred             eccCCCc-ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~~~~~-~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      ....... .....++..|+|||.+.+ .++.++|+||+||++|+|++|+.||...........+.....   ......++
T Consensus       150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~  226 (277)
T cd06642         150 QLTDTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSP---PTLEGQYS  226 (277)
T ss_pred             cccCcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhHHhhhhcCCC---CCCCcccC
Confidence            6653322 223467889999999865 457899999999999999999999976655544443332221   11223568


Q ss_pred             HHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          196 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      ..+.++|.+||+.+|.+||++.++++||||+...
T Consensus       227 ~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~  260 (277)
T cd06642         227 KPFKEFVEACLNKDPRFRPTAKELLKHKFITRYT  260 (277)
T ss_pred             HHHHHHHHHHccCCcccCcCHHHHHHhHHHHHHh
Confidence            8899999999999999999999999999997753

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.97  E-value=2.2e-31  Score=255.93  Aligned_cols=188  Identities=30%  Similarity=0.444  Sum_probs=148.3

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|+||+. |+|.+++...  +.+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++..
T Consensus        83 ~~lv~e~~~-~~l~~~~~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~---~~~~~kl~dfg~~~~  156 (334)
T cd07855          83 VYVVMDLME-SDLHHIIHSD--QPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVN---EDCELRIGDFGMARG  156 (334)
T ss_pred             EEEEEehhh-hhHHHHhccC--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCcEEeccccccee
Confidence            367999996 6898888443  5699999999999999999999999999999999999998   578999999999876


Q ss_pred             ccCCCc-----ccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhc---------
Q 014171          119 IKPGKK-----FQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN---------  182 (429)
Q Consensus       119 ~~~~~~-----~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~---------  182 (429)
                      ......     .....++..|+|||.+.+  .++.++|+||+||++|+|++|+.||.+.+.......+...         
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~~~~  236 (334)
T cd07855         157 LSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEEVL  236 (334)
T ss_pred             ecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChhHhh
Confidence            543221     124478889999998754  3588999999999999999999999776543333222211         


Q ss_pred             --------------CCCCCCC----CCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCCC
Q 014171          183 --------------KPDFRRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS  232 (429)
Q Consensus       183 --------------~~~~~~~----~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~~  232 (429)
                                    .......    ..+..+.+++++|.+||+.+|.+|||++++++||||+......
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~~~~~~~~~~  304 (334)
T cd07855         237 NRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHPFLAQYHDPD  304 (334)
T ss_pred             hhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhChhhhhccCCc
Confidence                          1111111    1245789999999999999999999999999999998765443

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]

Probab=99.97  E-value=6.6e-33  Score=244.59  Aligned_cols=188  Identities=24%  Similarity=0.456  Sum_probs=156.1

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||..|+..+.+.- +++++++.++..+++.-+.||+|||...-+|||||..|||++   ..++.||+|||.|.
T Consensus       102 DLWIVMEYCGAGSiSDI~R~-R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLN---T~G~AKLADFGVAG  177 (502)
T KOG0574|consen  102 DLWIVMEYCGAGSISDIMRA-RRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLN---TDGIAKLADFGVAG  177 (502)
T ss_pred             ceEeehhhcCCCcHHHHHHH-hcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEc---ccchhhhhhccccc
Confidence            34689999999999997754 458999999999999999999999999999999999999999   47899999999998


Q ss_pred             eccCCC-cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCC-CCCCCCCCCC
Q 014171          118 FIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP-DFRRKPWPSI  194 (429)
Q Consensus       118 ~~~~~~-~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~-~~~~~~~~~~  194 (429)
                      .+...- ..++.+|||.|+|||++.. .|..++||||+|++..+|..|++||.+..+-..+-.|-...+ .|..  +...
T Consensus       178 QLTDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIFMIPT~PPPTF~K--PE~W  255 (502)
T KOG0574|consen  178 QLTDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIFMIPTKPPPTFKK--PEEW  255 (502)
T ss_pred             hhhhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeEeccCCCCCCCCC--hHhh
Confidence            876543 4578899999999999974 689999999999999999999999976554333322222211 1111  1234


Q ss_pred             CHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA  231 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~  231 (429)
                      |.++-+|+++||..+|++|.|+-++++|||+++..+.
T Consensus       256 S~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~g~  292 (502)
T KOG0574|consen  256 SSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAPGC  292 (502)
T ss_pred             hhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCCcc
Confidence            7889999999999999999999999999999988654

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.97  E-value=5.6e-31  Score=246.99  Aligned_cols=179  Identities=19%  Similarity=0.249  Sum_probs=148.5

Q ss_pred             cceeEeeecCCCChHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecC
Q 014171           38 RKLRRIRLCEGGELLDRILAKKD--------------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK  103 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~--------------~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~  103 (429)
                      ..|++|||+.+|+|.+++.....              ..+++..+..++.|++.||.|||++|++||||||+||+++   
T Consensus        82 ~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~---  158 (283)
T cd05048          82 PTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVG---  158 (283)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEc---
Confidence            35689999999999999965421              4588999999999999999999999999999999999998   


Q ss_pred             CCCCEEEeecccceeccCCCc---ccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHH
Q 014171          104 EDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE  178 (429)
Q Consensus       104 ~~~~~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~  178 (429)
                      .++.++|+|||++........   .....+++.|+|||.+. +.++.++|+||+||++|+|++ |..||.+.+..+....
T Consensus       159 ~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~  238 (283)
T cd05048         159 EGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEM  238 (283)
T ss_pred             CCCcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence            478899999999876533221   22345678899999875 456889999999999999998 9999998888777776


Q ss_pred             HHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          179 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       179 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      +......   .....++.++.+|+.+||+.||.+||++.+++++
T Consensus       239 i~~~~~~---~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~  279 (283)
T cd05048         239 IRSRQLL---PCPEDCPARVYALMIECWNEIPARRPRFKDIHTR  279 (283)
T ss_pred             HHcCCcC---CCcccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            6654432   2234689999999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.97  E-value=8.2e-31  Score=244.41  Aligned_cols=184  Identities=26%  Similarity=0.433  Sum_probs=148.9

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...++|+||+.||+|.+++.+.  +.+++..+..++.||+.||.|||++|++|+||+|+||+++   .++.++|+|||.+
T Consensus        81 ~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~---~~~~~~l~d~~~~  155 (272)
T cd06629          81 EYLSIFLEYVPGGSIGSCLRTY--GRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVD---ADGICKISDFGIS  155 (272)
T ss_pred             CceEEEEecCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEc---CCCeEEEeecccc
Confidence            3457899999999999998554  6899999999999999999999999999999999999998   5789999999998


Q ss_pred             eeccCCC---cccccccCCcccccccccC---CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcC--CCCCC
Q 014171          117 DFIKPGK---KFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK--PDFRR  188 (429)
Q Consensus       117 ~~~~~~~---~~~~~~g~~~y~aPE~~~~---~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~--~~~~~  188 (429)
                      .......   ......++..|+|||.+..   .++.++|+||+|+++|++++|..||...........+....  ..++.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  235 (272)
T cd06629         156 KKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAIAAMFKLGNKRSAPPIPP  235 (272)
T ss_pred             ccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchHHHHHHhhccccCCcCCc
Confidence            7543221   1233467889999998864   25789999999999999999999996554444333332222  22233


Q ss_pred             CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          189 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       189 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                      ...+.++..++++|.+||..+|.+|||++++++|||+
T Consensus       236 ~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~  272 (272)
T cd06629         236 DVSMNLSPVALDFLNACFTINPDNRPTARELLQHPFI  272 (272)
T ss_pred             cccccCCHHHHHHHHHHhcCChhhCCCHHHHhhCCCC
Confidence            3345678999999999999999999999999999996

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.97  E-value=7.9e-31  Score=246.64  Aligned_cols=189  Identities=28%  Similarity=0.444  Sum_probs=147.9

Q ss_pred             cceeEeeecCCCChHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           38 RKLRRIRLCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      ..|+|||||+||+|.+++...  ....+++..+..++.||+.||.|||+.|++|+||+|+||+++   .++.++|+|||+
T Consensus        75 ~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~---~~~~~~l~dfg~  151 (287)
T cd06621          75 SIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLT---RKGQVKLCDFGV  151 (287)
T ss_pred             eEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEe---cCCeEEEeeccc
Confidence            357899999999999887542  345689999999999999999999999999999999999998   467899999999


Q ss_pred             ceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCC-----hhHHHHHHHhcCCC-CCC
Q 014171          116 SDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKT-----EDGIFKEVLRNKPD-FRR  188 (429)
Q Consensus       116 a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~-----~~~~~~~i~~~~~~-~~~  188 (429)
                      +........ ....++..|+|||.+.+ .++.++|+||+||++|+|++|+.||....     ..+....+...... ...
T Consensus       152 ~~~~~~~~~-~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (287)
T cd06621         152 SGELVNSLA-GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKD  230 (287)
T ss_pred             ccccccccc-ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhcc
Confidence            875543222 23457889999998864 55889999999999999999999997652     22333333332211 111


Q ss_pred             CCC--CCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          189 KPW--PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       189 ~~~--~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                      ...  ...++.++++|.+||..+|.+|||+.++++||||+....
T Consensus       231 ~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~~~~~~~~~  274 (287)
T cd06621         231 EPGNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEHPWIKAQMK  274 (287)
T ss_pred             CCCCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhCcccccccc
Confidence            111  134678999999999999999999999999999976543

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.97  E-value=3.4e-31  Score=246.31  Aligned_cols=185  Identities=22%  Similarity=0.346  Sum_probs=146.8

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..++|+||+.||+|.+++.+.  +.+++..+..++.|++.||.|||++|++|+||+|+||+++.  .+..++|+|||.+.
T Consensus        77 ~~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~--~~~~~~l~dfg~~~  152 (268)
T cd06630          77 HFNLFVEWMAGGSVSHLLSKY--GAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDS--TGQRLRIADFGAAA  152 (268)
T ss_pred             eEEEEEeccCCCcHHHHHHHh--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcC--CCCEEEEccccccc
Confidence            346899999999999988654  57899999999999999999999999999999999999974  33469999999987


Q ss_pred             eccCCCc-----ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcC-CCCCCCC
Q 014171          118 FIKPGKK-----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK-PDFRRKP  190 (429)
Q Consensus       118 ~~~~~~~-----~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~-~~~~~~~  190 (429)
                      .......     .....++..|+|||.+.+ .++.++|+||+|+++|+|++|..||...........+.... .......
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  232 (268)
T cd06630         153 RLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHLALIFKIASATTAPSI  232 (268)
T ss_pred             ccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchHHHHHHHhccCCCCCC
Confidence            6643321     123467889999998864 45889999999999999999999996554333222222111 1112222


Q ss_pred             CCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccc
Q 014171          191 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR  226 (429)
Q Consensus       191 ~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~  226 (429)
                      .+.+++++.+++.+||..+|.+||++.++++||||+
T Consensus       233 ~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~~~~~~  268 (268)
T cd06630         233 PEHLSPGLRDVTLRCLELQPEDRPPSRELLKHPVFR  268 (268)
T ss_pred             chhhCHHHHHHHHHHcCCCcccCcCHHHHhcCcccC
Confidence            345789999999999999999999999999999985

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.97  E-value=6.6e-31  Score=242.71  Aligned_cols=183  Identities=22%  Similarity=0.446  Sum_probs=152.1

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|+||+.+++|.+++....+..+++..+..++.|++.||.|||+++++|+||+|+||+++.  ++..++|+|||.+.
T Consensus        73 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~--~~~~~~l~d~~~~~  150 (257)
T cd08225          73 RLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSK--NGMVAKLGDFGIAR  150 (257)
T ss_pred             eEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcC--CCCeEEecccccch
Confidence            3578999999999999997765567899999999999999999999999999999999999984  33457999999987


Q ss_pred             eccCCCc-ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~~~~~-~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      ....... .....|++.|+|||.+.+ .++.++|+||+|+++++|++|..||...+.......+......   ...+..+
T Consensus       151 ~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~  227 (257)
T cd08225         151 QLNDSMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNLHQLVLKICQGYFA---PISPNFS  227 (257)
T ss_pred             hccCCcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhcccCC---CCCCCCC
Confidence            6643322 233468889999998864 4588999999999999999999999877766666555544322   2234678


Q ss_pred             HHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          196 NSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                      .+++++|.+||..+|++|||+.++++||||
T Consensus       228 ~~~~~~i~~~l~~~p~~Rpt~~~ll~~~~~  257 (257)
T cd08225         228 RDLRSLISQLFKVSPRDRPSITSILKRPFL  257 (257)
T ss_pred             HHHHHHHHHHhccChhhCcCHHHHhhCCCC
Confidence            899999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.97  E-value=6.6e-31  Score=247.97  Aligned_cols=190  Identities=27%  Similarity=0.394  Sum_probs=149.9

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+||||+. ++|.+.+.......+++..+..++.||+.||.|||++|++|+||+|+||+++.  .++.+||+|||++
T Consensus        74 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~--~~~~~kl~dfg~~  150 (294)
T PLN00009         74 KRLYLVFEYLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDR--RTNALKLADFGLA  150 (294)
T ss_pred             CeEEEEEeccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEEC--CCCEEEEcccccc
Confidence            34578999996 68888886655455789999999999999999999999999999999999984  3467999999998


Q ss_pred             eeccCCC-cccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCC-------
Q 014171          117 DFIKPGK-KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF-------  186 (429)
Q Consensus       117 ~~~~~~~-~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~-------  186 (429)
                      ....... ......+++.|+|||.+.+  .++.++|+||+||++|+|++|.+||...+..+...++.......       
T Consensus       151 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (294)
T PLN00009        151 RAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPG  230 (294)
T ss_pred             cccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccc
Confidence            7653322 2233467889999998854  35789999999999999999999998777665555443211100       


Q ss_pred             --------------CC----CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          187 --------------RR----KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       187 --------------~~----~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                                    ..    ...+.++..+++++.+||+.+|.+||++.++++||||+...
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~~~~~~~~  291 (294)
T PLN00009        231 VTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEHEYFKDLG  291 (294)
T ss_pred             cccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcCchHhHHh
Confidence                          00    01245788999999999999999999999999999998753

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.97  E-value=1.2e-30  Score=244.73  Aligned_cols=185  Identities=30%  Similarity=0.455  Sum_probs=150.8

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+||||+ +|+|.+++.......+++..+..++.|++.||.|||++|++|+||+|+||+++   .++.++|+|||.+
T Consensus        71 ~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~---~~~~~~l~d~~~~  146 (283)
T cd07830          71 DELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVS---GPEVVKIADFGLA  146 (283)
T ss_pred             CcEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEc---CCCCEEEeecccc
Confidence            3457899999 78999988766545789999999999999999999999999999999999999   5789999999999


Q ss_pred             eeccCCCcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCC-------
Q 014171          117 DFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR-------  187 (429)
Q Consensus       117 ~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~-------  187 (429)
                      .............++..|+|||.+.+  ..+.++|+||+|+++++|++|++||...........+........       
T Consensus       147 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (283)
T cd07830         147 REIRSRPPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEG  226 (283)
T ss_pred             eeccCCCCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhH
Confidence            87765545455678889999998753  358899999999999999999999987766555444332111000       


Q ss_pred             -------------------CCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          188 -------------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       188 -------------------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                                         ....+..+..+.++|.+||+.+|.+|||+++++.||||
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~~~~  283 (283)
T cd07830         227 YKLASKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQHPYF  283 (283)
T ss_pred             hhhhccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhhCCCC
Confidence                               00112346789999999999999999999999999997

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.97  E-value=7.2e-31  Score=246.24  Aligned_cols=185  Identities=27%  Similarity=0.409  Sum_probs=148.3

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|+||+. ++|.+++.......+++..+..++.|++.||.|||+++++||||+|+||+++   .++.++|+|||.+
T Consensus        71 ~~~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~---~~~~~~l~df~~~  146 (283)
T cd07835          71 NKLYLVFEFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLID---REGALKLADFGLA  146 (283)
T ss_pred             CeEEEEEeccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEc---CCCcEEEeecccc
Confidence            44578999995 7999988766545799999999999999999999999999999999999998   4788999999998


Q ss_pred             eeccCCC-cccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCC---------
Q 014171          117 DFIKPGK-KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP---------  184 (429)
Q Consensus       117 ~~~~~~~-~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~---------  184 (429)
                      ....... ......++..|+|||++.+  .++.++|+||+|+++|+|++|++||.+.+.......+.....         
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (283)
T cd07835         147 RAFGVPVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPG  226 (283)
T ss_pred             cccCCCccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhh
Confidence            7654322 2233456889999998764  347889999999999999999999987766544443332110         


Q ss_pred             ----------------CCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          185 ----------------DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       185 ----------------~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                                      .......+.++..+.++|.+||+.+|.+|||++++++||||
T Consensus       227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~~~~  283 (283)
T cd07835         227 VTSLPDYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQHPYF  283 (283)
T ss_pred             hhhchhhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhcCCCC
Confidence                            00011234577899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.97  E-value=1.1e-30  Score=242.13  Aligned_cols=181  Identities=27%  Similarity=0.465  Sum_probs=153.4

Q ss_pred             ceeEeeecCCCChHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHH-----HCCCeecCCCCCcEEEeecCCCCCEEEe
Q 014171           39 KLRRIRLCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECH-----LHGLVHRDMKPENFLFKSAKEDSSLKAT  111 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~lH-----~~~i~H~dikp~Nil~~~~~~~~~~kL~  111 (429)
                      .|+|+|||.+|+|.+++.+.  ....+++..+..++.||+.||.|||     +.+++|+||+|+||+++   .++.++|+
T Consensus        76 ~~~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~---~~~~~kl~  152 (265)
T cd08217          76 LYIVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLD---ANNNVKLG  152 (265)
T ss_pred             EEEEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEe---cCCCEEEe
Confidence            46899999999999998654  2467999999999999999999999     89999999999999999   47899999


Q ss_pred             ecccceeccCCCc-ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCC
Q 014171          112 DFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK  189 (429)
Q Consensus       112 Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  189 (429)
                      |||.+........ .....+++.|+|||.+.+ ..+.++|+||+|+++++|++|+.||...........+......   .
T Consensus       153 d~g~~~~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~  229 (265)
T cd08217         153 DFGLAKILGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIKEGKFR---R  229 (265)
T ss_pred             cccccccccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHhcCCCC---C
Confidence            9999887654443 345578999999999865 3578899999999999999999999887766666655554432   2


Q ss_pred             CCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          190 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       190 ~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                      .....+..+.+++.+||+.+|.+||++.++++|||+
T Consensus       230 ~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~~~~  265 (265)
T cd08217         230 IPYRYSSELNEVIKSMLNVDPDKRPSTEELLQLPLI  265 (265)
T ss_pred             CccccCHHHHHHHHHHccCCcccCCCHHHHhhCCCC
Confidence            224578999999999999999999999999999995

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]

Probab=99.97  E-value=1.1e-31  Score=231.03  Aligned_cols=179  Identities=23%  Similarity=0.331  Sum_probs=143.8

Q ss_pred             ceeEeeecCCCChHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCcEEEeecCCCCCEEEeecc
Q 014171           39 KLRRIRLCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFG  114 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~lH~~~--i~H~dikp~Nil~~~~~~~~~~kL~Dfg  114 (429)
                      .|++++|...|+|.+.+...  ++..++|.++..|+.+|++||++||+..  ++||||||.||+++   ..+.++|.|||
T Consensus        98 ~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls---~~~~~vl~D~G  174 (302)
T KOG2345|consen   98 AYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLS---DSGLPVLMDLG  174 (302)
T ss_pred             EEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEec---CCCceEEEecc
Confidence            35678899999999999654  4457999999999999999999999999  99999999999999   47899999999


Q ss_pred             cceeccCCCc----------ccccccCCcccccccccCC----CCCCcchHHHHHHHHHHhhCCCCCCCC--ChhHHHHH
Q 014171          115 LSDFIKPGKK----------FQDIVGSAYYVAPEVLKRK----SGPESDVWSIGVITYILLCGRRPFWDK--TEDGIFKE  178 (429)
Q Consensus       115 ~a~~~~~~~~----------~~~~~g~~~y~aPE~~~~~----~~~~~DiwslG~il~~l~~g~~pf~~~--~~~~~~~~  178 (429)
                      .+....-.-.          ......|..|+|||.+.-+    .+.++|||||||++|.|+.|..||...  ...+..-+
T Consensus       175 S~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLA  254 (302)
T KOG2345|consen  175 SATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALA  254 (302)
T ss_pred             CccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEe
Confidence            9875432111          1234578999999999633    278999999999999999999999432  11222334


Q ss_pred             HHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          179 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       179 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      +..+...+|...  .+|+.+.++|..||++||.+||++.+++.+
T Consensus       255 v~n~q~s~P~~~--~yse~l~~lik~mlqvdP~qRP~i~~ll~~  296 (302)
T KOG2345|consen  255 VQNAQISIPNSS--RYSEALHQLIKSMLQVDPNQRPTIPELLSK  296 (302)
T ss_pred             eeccccccCCCC--CccHHHHHHHHHHhcCCcccCCCHHHHHHH
Confidence            455555565544  389999999999999999999999998753

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.97  E-value=6.2e-31  Score=256.30  Aligned_cols=155  Identities=19%  Similarity=0.231  Sum_probs=124.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc---ccccccCCcccccc
Q 014171           62 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPE  138 (429)
Q Consensus        62 ~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE  138 (429)
                      .+++..+..++.||+.||.|||++||+||||||+||+++   +++.++|+|||++........   .....++..|+|||
T Consensus       208 ~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~---~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE  284 (374)
T cd05106         208 PLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLT---DGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPE  284 (374)
T ss_pred             CcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEe---CCCeEEEeeceeeeeccCCcceeeccCCCCccceeCHH
Confidence            478889999999999999999999999999999999998   578899999999876543221   11223456799999


Q ss_pred             ccc-CCCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCH
Q 014171          139 VLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA  216 (429)
Q Consensus       139 ~~~-~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~  216 (429)
                      ++. +.++.++||||+||++|+|++ |+.||...........+........  ....+++++.+++.+||+.||.+|||+
T Consensus       285 ~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dp~~RPs~  362 (374)
T cd05106         285 SIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNSKFYKMVKRGYQMS--RPDFAPPEIYSIMKMCWNLEPTERPTF  362 (374)
T ss_pred             HhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccHHHHHHHHcccCcc--CCCCCCHHHHHHHHHHcCCChhhCcCH
Confidence            885 456899999999999999997 9999987665554444444332222  223468999999999999999999999


Q ss_pred             HHHhC
Q 014171          217 AQALS  221 (429)
Q Consensus       217 ~e~l~  221 (429)
                      .++++
T Consensus       363 ~~l~~  367 (374)
T cd05106         363 SQISQ  367 (374)
T ss_pred             HHHHH
Confidence            99864

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]

Probab=99.97  E-value=9e-32  Score=252.19  Aligned_cols=183  Identities=28%  Similarity=0.504  Sum_probs=166.5

Q ss_pred             eeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccceec
Q 014171           40 LRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI  119 (429)
Q Consensus        40 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~  119 (429)
                      |++||-|-||.|...+..+  +.+++..++.++..+++|++|||++|||+|||||+|++++   ..|.+||.|||+|+.+
T Consensus       496 YmLmEaClGGElWTiLrdR--g~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd---~~Gy~KLVDFGFAKki  570 (732)
T KOG0614|consen  496 YMLMEACLGGELWTILRDR--GSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLD---NRGYLKLVDFGFAKKI  570 (732)
T ss_pred             hhhHHhhcCchhhhhhhhc--CCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeec---cCCceEEeehhhHHHh
Confidence            6799999999999999555  8999999999999999999999999999999999999999   6899999999999999


Q ss_pred             cCCCcccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHH
Q 014171          120 KPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA  198 (429)
Q Consensus       120 ~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~  198 (429)
                      ..+....+.+|||.|.|||++. +....++|.||||+++|||++|.+||.+.++..++..|+.+.-.+..+  ..++..+
T Consensus       571 ~~g~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGid~i~~P--r~I~k~a  648 (732)
T KOG0614|consen  571 GSGRKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGIDKIEFP--RRITKTA  648 (732)
T ss_pred             ccCCceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhhhhhhcc--cccchhH
Confidence            9999999999999999999875 456889999999999999999999999999999999999886443322  3578999


Q ss_pred             HHHHHHhccCCccCcCC-----HHHHhCCCccccCC
Q 014171          199 KDFVKKLLVKDPRARLT-----AAQALSHPWVREGG  229 (429)
Q Consensus       199 ~~li~~~l~~dp~~R~s-----~~e~l~h~~~~~~~  229 (429)
                      .+||.++...+|.+|..     +.++-+|.||..-.
T Consensus       649 ~~Lik~LCr~~P~ERLG~~~~gI~DIkkH~Wf~gfd  684 (732)
T KOG0614|consen  649 TDLIKKLCRDNPTERLGYQKGGINDIKKHRWFEGFD  684 (732)
T ss_pred             HHHHHHHHhcCcHhhhccccCChHHHHhhhhhhcCC
Confidence            99999999999999985     78999999998643

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.97  E-value=1e-30  Score=243.22  Aligned_cols=184  Identities=25%  Similarity=0.361  Sum_probs=143.7

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCC--CHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRY--TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l--~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      ..|+|+||+.||+|.+++.... ..+  ++..+..++.||+.||.|||++||+||||||+||+++.  ..+.++|+|||.
T Consensus        79 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~--~~~~~~l~dfg~  155 (268)
T cd06624          79 FFKIFMEQVPGGSLSALLRSKW-GPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNT--YSGVVKISDFGT  155 (268)
T ss_pred             EEEEEEecCCCCCHHHHHHHhc-ccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcC--CCCeEEEecchh
Confidence            3468999999999999986542 345  88899999999999999999999999999999999974  356899999999


Q ss_pred             ceeccCCCc-ccccccCCcccccccccC---CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCC
Q 014171          116 SDFIKPGKK-FQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW  191 (429)
Q Consensus       116 a~~~~~~~~-~~~~~g~~~y~aPE~~~~---~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  191 (429)
                      +........ .....+++.|+|||.+.+   .++.++|+||+|+++|+|++|+.||............. ......+...
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~~~~~~-~~~~~~~~~~  234 (268)
T cd06624         156 SKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQAAMFKV-GMFKIHPEIP  234 (268)
T ss_pred             heecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhhhHhhh-hhhccCCCCC
Confidence            876543222 233457889999998853   25789999999999999999999996543322211111 1111112223


Q ss_pred             CCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          192 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       192 ~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                      ..+++++++++.+||+.+|.+|||+.+++.||||
T Consensus       235 ~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~~~~  268 (268)
T cd06624         235 ESLSAEAKNFILRCFEPDPDKRASAHDLLQDPFL  268 (268)
T ss_pred             cccCHHHHHHHHHHcCCCchhCCCHHHHHhCCCC
Confidence            4578899999999999999999999999999997

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.97  E-value=4.6e-31  Score=253.09  Aligned_cols=190  Identities=19%  Similarity=0.249  Sum_probs=146.5

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|+||+.+|+|.+++.+.....+++..+..++.|++.||.|||++|++||||||+||+++   ..+.++++||+.+.
T Consensus        73 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~---~~~~~~~~~~~~~~  149 (328)
T cd08226          73 WLWVISPFMAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILIS---GDGLVSLSGLSHLY  149 (328)
T ss_pred             ceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEe---CCCcEEEechHHHh
Confidence            456899999999999988766556799999999999999999999999999999999999998   47889999997653


Q ss_pred             eccCCCcc--------cccccCCcccccccccCC---CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCC
Q 014171          118 FIKPGKKF--------QDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF  186 (429)
Q Consensus       118 ~~~~~~~~--------~~~~g~~~y~aPE~~~~~---~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~  186 (429)
                      ........        ....++..|+|||++.+.   ++.++|+||+||++|+|++|+.||.+.................
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~~  229 (328)
T cd08226         150 SLVRNGQKAKVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQMLLQKLKGPPYS  229 (328)
T ss_pred             hhhccCccccccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHHhcCCCCC
Confidence            32211110        111345679999998643   5789999999999999999999997766544443333221110


Q ss_pred             C-------------------------------------------CCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCC
Q 014171          187 R-------------------------------------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP  223 (429)
Q Consensus       187 ~-------------------------------------------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~  223 (429)
                      +                                           .+....++..+.+|+.+||+.||.+|||++++++||
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~~  309 (328)
T cd08226         230 PLDITTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSHA  309 (328)
T ss_pred             CccccccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhCH
Confidence            0                                           001123567799999999999999999999999999


Q ss_pred             ccccCCC
Q 014171          224 WVREGGD  230 (429)
Q Consensus       224 ~~~~~~~  230 (429)
                      ||+....
T Consensus       310 ~~~~~~~  316 (328)
T cd08226         310 FFKQVKE  316 (328)
T ss_pred             HHHHHHH
Confidence            9987643

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]

Probab=99.97  E-value=2e-31  Score=236.26  Aligned_cols=214  Identities=27%  Similarity=0.398  Sum_probs=162.2

Q ss_pred             eecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHH
Q 014171            5 LIGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKK---DSRYTEKDAAVVVRQMLRVAAE   81 (429)
Q Consensus         5 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~---~~~l~~~~~~~i~~qil~aL~~   81 (429)
                      |+++++|+|++.+.+++-..           ....++|+||.+. +|.+.|..++   ...++...++.++.||+.|+.|
T Consensus        80 L~REl~h~nvi~Lv~Vfl~~-----------d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~Y  147 (438)
T KOG0666|consen   80 LLRELKHPNVISLVKVFLSH-----------DKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHY  147 (438)
T ss_pred             HHHHhcCCcchhHHHHHhcc-----------CceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHH
Confidence            46778888887777655431           2223579999985 8988886542   3458999999999999999999


Q ss_pred             HHHCCCeecCCCCCcEEEeec-CCCCCEEEeecccceeccCCCc----ccccccCCcccccccccC--CCCCCcchHHHH
Q 014171           82 CHLHGLVHRDMKPENFLFKSA-KEDSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKR--KSGPESDVWSIG  154 (429)
Q Consensus        82 lH~~~i~H~dikp~Nil~~~~-~~~~~~kL~Dfg~a~~~~~~~~----~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG  154 (429)
                      ||++=|+||||||.||++..+ .+.|.+||+|+|+|+.+...-.    ....+-|.+|+|||.+.+  .|+++.|+||+|
T Consensus       148 LH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiG  227 (438)
T KOG0666|consen  148 LHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIG  227 (438)
T ss_pred             HhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHH
Confidence            999999999999999999853 2458999999999987754322    245567899999999975  579999999999


Q ss_pred             HHHHHHhhCCCCCCCCChh---------HHHHHHHhcCCCCCCCCCCC--------------------------------
Q 014171          155 VITYILLCGRRPFWDKTED---------GIFKEVLRNKPDFRRKPWPS--------------------------------  193 (429)
Q Consensus       155 ~il~~l~~g~~pf~~~~~~---------~~~~~i~~~~~~~~~~~~~~--------------------------------  193 (429)
                      ||+.||+|-.+.|.+....         ....+|..-........||.                                
T Consensus       228 CIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k  307 (438)
T KOG0666|consen  228 CIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHK  307 (438)
T ss_pred             HHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhc
Confidence            9999999999888654321         22333332211111122221                                


Q ss_pred             -CCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          194 -ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       194 -~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                       -++...+|+.+||.+||.+|+|++++++|+||.+..-
T Consensus       308 ~k~~~a~~LL~klL~yDP~kRIta~qAleh~yF~~d~l  345 (438)
T KOG0666|consen  308 VKDPSALDLLQKLLTYDPIKRITAEQALEHPYFTEDPL  345 (438)
T ss_pred             CCCchHHHHHHHHhccCchhhccHHHHhcccccccCCC
Confidence             1345789999999999999999999999999998643

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.97  E-value=1.3e-30  Score=243.01  Aligned_cols=177  Identities=18%  Similarity=0.264  Sum_probs=145.0

Q ss_pred             ceeEeeecCCCChHHHHHhh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecc
Q 014171           39 KLRRIRLCEGGELLDRILAK----KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG  114 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~----~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg  114 (429)
                      .++||||+.+|+|.+++...    +...+++..+..++.|++.||.|||++||+||||||+||+++   .++.++|+|||
T Consensus        81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg  157 (272)
T cd05075          81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLN---ENMNVCVADFG  157 (272)
T ss_pred             cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEc---CCCCEEECCCC
Confidence            46799999999999988533    224589999999999999999999999999999999999998   57889999999


Q ss_pred             cceeccCCCcc---cccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCC
Q 014171          115 LSDFIKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRK  189 (429)
Q Consensus       115 ~a~~~~~~~~~---~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~  189 (429)
                      ++.........   ....+++.|+|||.+.+ .++.++|+||+|+++|+|++ |+.||.+.........+..+...   .
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~---~  234 (272)
T cd05075         158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLRQGNRL---K  234 (272)
T ss_pred             cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCC---C
Confidence            99876433221   12245678999999865 45889999999999999999 89999887777666666554321   1


Q ss_pred             CCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          190 PWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       190 ~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ..+.++..++++|.+||+.+|.+|||+.++++
T Consensus       235 ~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~  266 (272)
T cd05075         235 QPPDCLDGLYSLMSSCWLLNPKDRPSFETLRC  266 (272)
T ss_pred             CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            22467899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.97  E-value=8.1e-31  Score=242.08  Aligned_cols=179  Identities=25%  Similarity=0.443  Sum_probs=151.1

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|+||+++|+|.+++...++..+++..+..++.|++.||.|||++||+|+||||+||+++   .++.++|+|||.+.
T Consensus        72 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~---~~~~~~l~dfg~~~  148 (255)
T cd08219          72 HLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLT---QNGKVKLGDFGSAR  148 (255)
T ss_pred             EEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEC---CCCcEEEcccCcce
Confidence            357899999999999998766667799999999999999999999999999999999999998   57889999999987


Q ss_pred             eccCCC-cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~~~~-~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      ...... ......|++.|+|||++.+ ..+.++|+||+|+++|+|++|..||...+.......+..+....   ....++
T Consensus       149 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~  225 (255)
T cd08219         149 LLTSPGAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSWKNLILKVCQGSYKP---LPSHYS  225 (255)
T ss_pred             eecccccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCHHHHHHHHhcCCCCC---CCcccC
Confidence            664332 2234568889999999865 45889999999999999999999998877766666665554322   223578


Q ss_pred             HHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          196 NSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      ..++++|.+||+.||.+|||+.+++.-
T Consensus       226 ~~~~~li~~~l~~~P~~Rp~~~~il~~  252 (255)
T cd08219         226 YELRSLIKQMFKRNPRSRPSATTILSR  252 (255)
T ss_pred             HHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence            899999999999999999999999864

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.97  E-value=6.5e-31  Score=240.18  Aligned_cols=173  Identities=24%  Similarity=0.346  Sum_probs=141.0

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+||||++||+|.+++.+.  ..+++..+..++.|++.||.|||++||+||||||+||+++   .++.++|+|||.+.
T Consensus        59 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~~l~df~~~~  133 (237)
T cd05576          59 SVFLVLQHAEGGKLWSHISKF--LNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLD---DRGHIQLTYFSRWS  133 (237)
T ss_pred             eEEEEEecCCCCCHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEc---CCCCEEEecccchh
Confidence            457899999999999998655  5699999999999999999999999999999999999998   47789999999876


Q ss_pred             eccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCH
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN  196 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  196 (429)
                      .....  .....++..|+|||.+.+ .++.++|+||+|+++|+|++|..|+......      ......+  ...+.+++
T Consensus       134 ~~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~------~~~~~~~--~~~~~~~~  203 (237)
T cd05576         134 EVEDS--CDGEAVENMYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG------INTHTTL--NIPEWVSE  203 (237)
T ss_pred             ccccc--cccCCcCccccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh------ccccccc--CCcccCCH
Confidence            55432  233456778999998864 4688999999999999999999887543211      0011111  12245789


Q ss_pred             HHHHHHHHhccCCccCcCCH-----HHHhCCCcc
Q 014171          197 SAKDFVKKLLVKDPRARLTA-----AQALSHPWV  225 (429)
Q Consensus       197 ~~~~li~~~l~~dp~~R~s~-----~e~l~h~~~  225 (429)
                      .++++|.+||+.||.+||++     +++++||||
T Consensus       204 ~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h~~~  237 (237)
T cd05576         204 EARSLLQQLLQFNPTERLGAGVAGVEDIKSHPFF  237 (237)
T ss_pred             HHHHHHHHHccCCHHHhcCCCccchHHHHcCCCC
Confidence            99999999999999999985     999999997

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.97  E-value=1.3e-30  Score=243.89  Aligned_cols=181  Identities=20%  Similarity=0.304  Sum_probs=146.6

Q ss_pred             ceeEeeecCCCChHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeec
Q 014171           39 KLRRIRLCEGGELLDRILAKKD-----SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF  113 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~-----~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Df  113 (429)
                      .|+||||+.||+|.+++...+.     ..+++..+..++.||+.||.|||++|++||||||+||+++..+....+||+||
T Consensus        84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~df  163 (277)
T cd05036          84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADF  163 (277)
T ss_pred             cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccC
Confidence            4789999999999999866532     25899999999999999999999999999999999999986444557999999


Q ss_pred             ccceeccCCCcc---cccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCC
Q 014171          114 GLSDFIKPGKKF---QDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRR  188 (429)
Q Consensus       114 g~a~~~~~~~~~---~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~  188 (429)
                      |++.........   .....+..|+|||++. +.++.++||||+||++|+|++ |..||.+.+.......+......   
T Consensus       164 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~---  240 (277)
T cd05036         164 GMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFVTGGGRL---  240 (277)
T ss_pred             ccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcC---
Confidence            998866322211   1223356799999986 456899999999999999997 99999888777766655543321   


Q ss_pred             CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          189 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       189 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      .....++..+.+++.+||+.+|++|||+.++++|
T Consensus       241 ~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~  274 (277)
T cd05036         241 DPPKGCPGPVYRIMTDCWQHTPEDRPNFATILER  274 (277)
T ss_pred             CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            1234678999999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.97  E-value=1.7e-30  Score=243.95  Aligned_cols=183  Identities=28%  Similarity=0.435  Sum_probs=150.5

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .++||||+. ++|.+++.......+++..+..++.|++.||.|||+.|++|+||+|+||+++   .++.++|+|||.+..
T Consensus        81 ~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~---~~~~~~l~dfg~~~~  156 (287)
T cd07838          81 LTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVT---SDGQVKIADFGLARI  156 (287)
T ss_pred             eEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEc---cCCCEEEeccCccee
Confidence            468999998 5899888765545799999999999999999999999999999999999999   468999999999987


Q ss_pred             ccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCC------------
Q 014171          119 IKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD------------  185 (429)
Q Consensus       119 ~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~------------  185 (429)
                      ...........++..|+|||.+.+ .++.++|+||+||++|+|++|.+||.+.+..+...++......            
T Consensus       157 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (287)
T cd07838         157 YSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWPRNVSL  236 (287)
T ss_pred             ccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhcCCCccc
Confidence            755544445567889999999864 4588999999999999999999999888777666655432110            


Q ss_pred             ----CC-------CCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          186 ----FR-------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       186 ----~~-------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                          ++       ....+.++..+.++|.+||+.||.+||+++++++||||
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~~~~~  287 (287)
T cd07838         237 PRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQHPYF  287 (287)
T ss_pred             chhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhcCcCC
Confidence                00       00112456788999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.97  E-value=4.7e-30  Score=260.55  Aligned_cols=276  Identities=21%  Similarity=0.236  Sum_probs=176.1

Q ss_pred             ccceeEeeecCCCChHHHHHhhcC------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEE
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKD------------------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFL   98 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~------------------~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil   98 (429)
                      ...++|+||+.+|+|.+++.....                  ....+..+..++.||+.||.|||++||+||||||+|||
T Consensus       208 ~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRDLKP~NIL  287 (566)
T PLN03225        208 DEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRDVKPQNII  287 (566)
T ss_pred             CceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCcCCHHHEE
Confidence            345789999999999998864310                  11123456789999999999999999999999999999


Q ss_pred             EeecCCCCCEEEeecccceeccCCC--cccccccCCcccccccccC-----------------------CCCCCcchHHH
Q 014171           99 FKSAKEDSSLKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR-----------------------KSGPESDVWSI  153 (429)
Q Consensus        99 ~~~~~~~~~~kL~Dfg~a~~~~~~~--~~~~~~g~~~y~aPE~~~~-----------------------~~~~~~Diwsl  153 (429)
                      ++.  .++.+||+|||+|..+....  ......+++.|+|||.+..                       .++.++||||+
T Consensus       288 l~~--~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVwSl  365 (566)
T PLN03225        288 FSE--GSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIYSA  365 (566)
T ss_pred             EeC--CCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccHHH
Confidence            984  35789999999998654322  2345678999999996531                       12335699999


Q ss_pred             HHHHHHHhhCCCCCCCCChhHHHHHHH-hcCCC-------CCCC----------CCCCCCHHHHHHHHHhccCCccCcCC
Q 014171          154 GVITYILLCGRRPFWDKTEDGIFKEVL-RNKPD-------FRRK----------PWPSISNSAKDFVKKLLVKDPRARLT  215 (429)
Q Consensus       154 G~il~~l~~g~~pf~~~~~~~~~~~i~-~~~~~-------~~~~----------~~~~~~~~~~~li~~~l~~dp~~R~s  215 (429)
                      ||++|+|+++..|+..  ....+.... .....       ....          .+...+...++||.+||+.||.+|||
T Consensus       366 GviL~el~~~~~~~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~dP~kR~t  443 (566)
T PLN03225        366 GLIFLQMAFPNLRSDS--NLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFKGRQRIS  443 (566)
T ss_pred             HHHHHHHHhCcCCCch--HHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCCcccCCC
Confidence            9999999997665422  111111111 11100       0000          00112344668999999999999999


Q ss_pred             HHHHhCCCccccCCCCCCCCcChHHHHhhHHhhhhhHHHHHHHHhhhcccchHHHhhhhccccccCCCCCCcccHHHHHH
Q 014171          216 AAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQ  295 (429)
Q Consensus       216 ~~e~l~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~  295 (429)
                      +.++|+||||+.........     ++++.. .......+.         ..+-.+.+......-..+.+|-.+..++..
T Consensus       444 a~e~L~Hpff~~~~~~~~~~-----~~~~~~-~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~  508 (566)
T PLN03225        444 AKAALAHPYFDREGLLGLSV-----MQNLRL-QLFRATQQD---------YGEAAAWVVFLMAKSGTEKEGGFTEAQLQE  508 (566)
T ss_pred             HHHHhCCcCcCCCCcccccc-----cccccc-ccchhhHHH---------HHHHHHHHHHHHHhcCCCCCCCccHHHHHH
Confidence            99999999998764321111     111100 000000000         001112233334445667788899999988


Q ss_pred             HHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHH
Q 014171          296 ALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA  332 (429)
Q Consensus       296 ~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~  332 (429)
                      +.... +.+.....=..+.+..+.+..|..++.+++.
T Consensus       509 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  544 (566)
T PLN03225        509 LREKE-PKKKGSAQRNALASALRLQRKGVKTVARTVD  544 (566)
T ss_pred             hhhhc-CcchhhhhhhhHHHHHhhhhhhhhhhhhhhh
Confidence            76432 2222222222488888889999999999875

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.97  E-value=8.8e-31  Score=251.98  Aligned_cols=186  Identities=27%  Similarity=0.432  Sum_probs=146.2

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|+||+. ++|...+..   ..+++..+..++.|++.||.|||++||+||||||+||+++   .++.++|+|||++..
T Consensus        83 ~~lv~e~~~-~~l~~~~~~---~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~---~~~~~kl~dfg~~~~  155 (336)
T cd07849          83 VYIVQELME-TDLYKLIKT---QHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TNCDLKICDFGLARI  155 (336)
T ss_pred             EEEEehhcc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEC---CCCCEEECcccceee
Confidence            468999997 588877633   4799999999999999999999999999999999999998   578899999999876


Q ss_pred             ccCCCc----ccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCC--------
Q 014171          119 IKPGKK----FQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP--------  184 (429)
Q Consensus       119 ~~~~~~----~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~--------  184 (429)
                      ......    .....|++.|+|||.+.+  .++.++|+||+||++|+|++|+.||.+.........+.....        
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  235 (336)
T cd07849         156 ADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQEDLN  235 (336)
T ss_pred             ccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHH
Confidence            543222    233567899999998643  458899999999999999999999977654333322211000        


Q ss_pred             ---------------CCCC----CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCC
Q 014171          185 ---------------DFRR----KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA  231 (429)
Q Consensus       185 ---------------~~~~----~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~  231 (429)
                                     ....    ...+..+.++.++|.+||+.+|.+|||+.++++||||+.....
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~hp~~~~~~~~  301 (336)
T cd07849         236 CIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAHPYLEQYHDP  301 (336)
T ss_pred             HhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcCccccccCCC
Confidence                           0000    0123567889999999999999999999999999999987654

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.97  E-value=1.7e-30  Score=241.14  Aligned_cols=178  Identities=19%  Similarity=0.241  Sum_probs=147.1

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..++||||+.+|+|.+++.......+++..+..++.|++.||.|||++|++||||||+||+++   .++.+||+|||.+.
T Consensus        76 ~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~---~~~~~kl~df~~~~  152 (263)
T cd05052          76 PFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSR  152 (263)
T ss_pred             CcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEc---CCCcEEeCCCcccc
Confidence            346899999999999999766556799999999999999999999999999999999999998   57889999999987


Q ss_pred             eccCCCccc--ccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          118 FIKPGKKFQ--DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       118 ~~~~~~~~~--~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      .........  ...++..|+|||.+.+ .++.++||||+||++|+|++ |..||.+....+....+....   .......
T Consensus       153 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~  229 (263)
T cd05052         153 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKGY---RMERPEG  229 (263)
T ss_pred             ccccceeeccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCC---CCCCCCC
Confidence            665432211  1233567999998864 45889999999999999998 999998877777666665432   2223356


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ++..+.+++.+||+.+|++|||+.++++
T Consensus       230 ~~~~~~~li~~cl~~~p~~Rp~~~~l~~  257 (263)
T cd05052         230 CPPKVYELMRACWQWNPSDRPSFAEIHQ  257 (263)
T ss_pred             CCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            7899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.97  E-value=1.4e-30  Score=242.26  Aligned_cols=178  Identities=17%  Similarity=0.243  Sum_probs=145.5

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+||||+.+|+|.+++... ...+++..+..++.|++.||.|||++|++||||||+||+++   .++.++++|||.+
T Consensus        79 ~~~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~---~~~~~~l~dfg~~  154 (266)
T cd05064          79 NTMMIVTEYMSNGALDSFLRKH-EGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVN---SDLVCKISGFRRL  154 (266)
T ss_pred             CCcEEEEEeCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEc---CCCcEEECCCccc
Confidence            3457899999999999988654 35789999999999999999999999999999999999998   5789999999987


Q ss_pred             eeccCCCccc--ccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCC
Q 014171          117 DFIKPGKKFQ--DIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWP  192 (429)
Q Consensus       117 ~~~~~~~~~~--~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  192 (429)
                      ..........  ...++..|+|||.+. +.++.++||||+||++|++++ |..||.+.+.......+..+..   .+.++
T Consensus       155 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~  231 (266)
T cd05064         155 QEDKSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQDVIKAVEDGFR---LPAPR  231 (266)
T ss_pred             ccccccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCC---CCCCC
Confidence            6543222111  223457899999886 456889999999999999775 9999998888777776655432   22335


Q ss_pred             CCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          193 SISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       193 ~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      .++..+.+++.+||+.+|.+||+++++++
T Consensus       232 ~~~~~~~~li~~c~~~~p~~RP~~~~i~~  260 (266)
T cd05064         232 NCPNLLHQLMLDCWQKERGERPRFSQIHS  260 (266)
T ss_pred             CCCHHHHHHHHHHcCCCchhCCCHHHHHH
Confidence            67899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.97  E-value=8.1e-31  Score=245.82  Aligned_cols=187  Identities=24%  Similarity=0.329  Sum_probs=148.7

Q ss_pred             ccceeEeeecCCCChHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCcEEEeecCCCCCEEEeec
Q 014171           37 LRKLRRIRLCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDSSLKATDF  113 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~lH~~-~i~H~dikp~Nil~~~~~~~~~~kL~Df  113 (429)
                      ...|+||||++ |+|.+++...  .+..+++..+..++.||+.||.|||++ +++||||||+||+++   .++.+||+||
T Consensus        73 ~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~---~~~~~kl~df  148 (283)
T cd06617          73 GDVWICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLIN---RNGQVKLCDF  148 (283)
T ss_pred             CcEEEEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEEC---CCCCEEEeec
Confidence            34578999997 6888877543  335799999999999999999999997 999999999999998   5789999999


Q ss_pred             ccceeccCCCcccccccCCcccccccccC-----CCCCCcchHHHHHHHHHHhhCCCCCCCCC-hhHHHHHHHhcC-CCC
Q 014171          114 GLSDFIKPGKKFQDIVGSAYYVAPEVLKR-----KSGPESDVWSIGVITYILLCGRRPFWDKT-EDGIFKEVLRNK-PDF  186 (429)
Q Consensus       114 g~a~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~DiwslG~il~~l~~g~~pf~~~~-~~~~~~~i~~~~-~~~  186 (429)
                      |.+.............++..|+|||.+.+     .++.++|+||+||++|+|++|+.||.... ..+....+.... +.+
T Consensus       149 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~  228 (283)
T cd06617         149 GISGYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPSPQL  228 (283)
T ss_pred             ccccccccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCCCCC
Confidence            99886644333334568889999998853     34788999999999999999999996432 223333333322 112


Q ss_pred             CCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          187 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       187 ~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                      +   ...++.++.++|.+||..+|.+||+++++++||||+....
T Consensus       229 ~---~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~~  269 (283)
T cd06617         229 P---AEKFSPEFQDFVNKCLKKNYKERPNYPELLQHPFFELHLS  269 (283)
T ss_pred             C---ccccCHHHHHHHHHHccCChhhCcCHHHHhcCchhhhccc
Confidence            1   2347899999999999999999999999999999998653

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.97  E-value=9.3e-31  Score=245.80  Aligned_cols=183  Identities=27%  Similarity=0.445  Sum_probs=145.8

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|+||+.+++|......  ...+++.++..++.||+.||.|||+.|++|+||+|+||+++   .++.++|+|||++.
T Consensus        74 ~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~---~~~~~~l~dfg~~~  148 (286)
T cd07846          74 RLYLVFEFVDHTVLDDLEKY--PNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVS---QSGVVKLCDFGFAR  148 (286)
T ss_pred             eEEEEEecCCccHHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEC---CCCcEEEEeeeeee
Confidence            35789999999888776533  35699999999999999999999999999999999999998   57899999999987


Q ss_pred             eccCCC-cccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCC--------
Q 014171          118 FIKPGK-KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF--------  186 (429)
Q Consensus       118 ~~~~~~-~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~--------  186 (429)
                      ...... ......++..|+|||.+.+  ..+.++|+||+|+++|+|++|++||.+....+....+......+        
T Consensus       149 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (286)
T cd07846         149 TLAAPGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIF  228 (286)
T ss_pred             eccCCccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHh
Confidence            664332 2234567889999998864  34778999999999999999999997666544333332211100        


Q ss_pred             -----------CC--------CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          187 -----------RR--------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       187 -----------~~--------~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                                 +.        ..++.++..+.+++.+||+.+|.+||++.++++||||
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  286 (286)
T cd07846         229 QKNPLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLHHEFF  286 (286)
T ss_pred             ccchHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhcCCCC
Confidence                       00        1134678899999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.97  E-value=1.6e-30  Score=240.57  Aligned_cols=175  Identities=22%  Similarity=0.258  Sum_probs=144.7

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .++||||+.+|+|.+++...  ..+++..+..++.|++.||.|||++||+||||||.||+++   .++.++|+|||.+..
T Consensus        70 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~---~~~~~kl~Dfg~~~~  144 (257)
T cd05116          70 WMLVMELAELGPLNKFLQKN--KHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLV---TQHYAKISDFGLSKA  144 (257)
T ss_pred             cEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEc---CCCeEEECCCccccc
Confidence            46899999999999998544  5799999999999999999999999999999999999998   477899999999876


Q ss_pred             ccCCCcc----cccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCC
Q 014171          119 IKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWP  192 (429)
Q Consensus       119 ~~~~~~~----~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  192 (429)
                      .......    ....++..|+|||.+.. .++.++|+||+||++|+|++ |+.||.+....+....+..+..   ...++
T Consensus       145 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~---~~~~~  221 (257)
T cd05116         145 LGADENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKGNEVTQMIESGER---MECPQ  221 (257)
T ss_pred             cCCCCCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCC---CCCCC
Confidence            6433221    12233578999998864 45789999999999999998 9999988777777766665432   12234


Q ss_pred             CCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          193 SISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       193 ~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      .++++++++|.+||+.||.+||+++++.+
T Consensus       222 ~~~~~l~~li~~~~~~~p~~Rp~~~~i~~  250 (257)
T cd05116         222 RCPPEMYDLMKLCWTYGVDERPGFAVVEL  250 (257)
T ss_pred             CCCHHHHHHHHHHhccCchhCcCHHHHHH
Confidence            68999999999999999999999988753

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.97  E-value=1.9e-30  Score=239.76  Aligned_cols=181  Identities=29%  Similarity=0.437  Sum_probs=150.0

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|+||++|++|.+++.+.  ..+++..+..++.|++.||.|||+.|++|+||+|+||+++   .++.+||+|||.+.
T Consensus        76 ~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~---~~~~~kl~d~~~~~  150 (258)
T cd06632          76 NLYIFLELVPGGSLAKLLKKY--GSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVD---TNGVVKLADFGMAK  150 (258)
T ss_pred             eEEEEEEecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEccCccce
Confidence            457899999999999988554  5689999999999999999999999999999999999998   47889999999987


Q ss_pred             eccCCCcccccccCCcccccccccCC--CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      ............++..|+|||.+...  ++.++|+||+|+++|+|++|+.||...........+.... . .....+.++
T Consensus       151 ~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~-~-~~~~~~~~~  228 (258)
T cd06632         151 QVVEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVAAVFKIGRSK-E-LPPIPDHLS  228 (258)
T ss_pred             eccccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHHHHHHHHhcc-c-CCCcCCCcC
Confidence            76544434456788999999988543  5889999999999999999999997766444444433311 1 122234678


Q ss_pred             HHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          196 NSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                      ..+++++.+||..+|.+||++.+++.|||+
T Consensus       229 ~~~~~li~~~l~~~p~~Rp~~~~~l~~~~~  258 (258)
T cd06632         229 DEAKDFILKCLQRDPSLRPTAAELLEHPFV  258 (258)
T ss_pred             HHHHHHHHHHhhcCcccCcCHHHHhcCCCC
Confidence            999999999999999999999999999996

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.97  E-value=1.9e-30  Score=240.07  Aligned_cols=176  Identities=19%  Similarity=0.249  Sum_probs=144.6

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .++||||+++|+|.+++... ...+++..+..++.|++.||.|||++|++||||||+||+++   .++.+||+|||++..
T Consensus        69 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~---~~~~~kl~dfg~~~~  144 (257)
T cd05115          69 LMLVMEMASGGPLNKFLSGK-KDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLV---NQHYAKISDFGLSKA  144 (257)
T ss_pred             eEEEEEeCCCCCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEc---CCCcEEeccCCcccc
Confidence            46899999999999988643 35799999999999999999999999999999999999998   578899999999876


Q ss_pred             ccCCCcc----cccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCC
Q 014171          119 IKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWP  192 (429)
Q Consensus       119 ~~~~~~~----~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  192 (429)
                      .......    ....++..|+|||.+.. .++.++|+||+||++|++++ |..||.+.........+..+...   ...+
T Consensus       145 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~  221 (257)
T cd05115         145 LGADDSYYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGPEVMSFIEQGKRL---DCPA  221 (257)
T ss_pred             ccCCccceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCC---CCCC
Confidence            5433221    11223568999998864 45889999999999999996 99999888777776666555421   2234


Q ss_pred             CCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          193 SISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       193 ~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ..++++.+++.+||..+|++||++.++.+
T Consensus       222 ~~~~~l~~li~~c~~~~~~~Rp~~~~i~~  250 (257)
T cd05115         222 ECPPEMYALMKDCWIYKWEDRPNFAKVEE  250 (257)
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            67899999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.97  E-value=1.3e-30  Score=251.36  Aligned_cols=185  Identities=28%  Similarity=0.437  Sum_probs=146.4

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|+||+. ++|.+++..   +.+++..+..++.||+.||.|||+.||+||||||+||+++.  .+..++|+|||.+..
T Consensus        91 ~~lv~e~~~-~~L~~~~~~---~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~--~~~~~kl~dfg~~~~  164 (342)
T cd07854          91 VYIVQEYME-TDLANVLEQ---GPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINT--EDLVLKIGDFGLARI  164 (342)
T ss_pred             EEEEeeccc-ccHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcC--CCceEEECCccccee
Confidence            578999997 588887742   46999999999999999999999999999999999999974  456789999999876


Q ss_pred             ccCCCc----ccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCC------
Q 014171          119 IKPGKK----FQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF------  186 (429)
Q Consensus       119 ~~~~~~----~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~------  186 (429)
                      ......    .....++..|+|||.+.+  .++.++|+||+||++|+|++|+.||.+.........+....+..      
T Consensus       165 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  244 (342)
T cd07854         165 VDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESVPVVREEDRN  244 (342)
T ss_pred             cCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChHHhh
Confidence            543211    123357889999998753  35789999999999999999999998776655444433221100      


Q ss_pred             ----------------CC----CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          187 ----------------RR----KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       187 ----------------~~----~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                                      ..    ...+.++.++.+||.+||+.||.+|||+.++++||||+...
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h~~~~~~~  307 (342)
T cd07854         245 ELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMHPYMSCYS  307 (342)
T ss_pred             hhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCCCcccccc
Confidence                            00    01235788999999999999999999999999999998654

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.97  E-value=7.5e-31  Score=243.14  Aligned_cols=184  Identities=32%  Similarity=0.539  Sum_probs=154.1

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|+||+.||+|.+++.+.  +.+++..+..++.||+.||.|||++|++|+||+|+||+++   .++.++|+|||++.
T Consensus        67 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~---~~~~~~l~dfg~~~  141 (265)
T cd05579          67 NLYLVMEYLPGGDLASLLENV--GSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILID---SNGHLKLTDFGLSK  141 (265)
T ss_pred             EEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEc---CCCCEEEEecccch
Confidence            356899999999999988654  4799999999999999999999999999999999999999   57889999999887


Q ss_pred             eccCCC---------cccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCC
Q 014171          118 FIKPGK---------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR  187 (429)
Q Consensus       118 ~~~~~~---------~~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~  187 (429)
                      ......         ......++..|+|||..... .+.++|+||+|+++|++++|..||...........+..+...++
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~  221 (265)
T cd05579         142 VGLVRRQINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILNGKIEWP  221 (265)
T ss_pred             hcccCcccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCcCCC
Confidence            543321         22334678899999988643 57899999999999999999999988887777777666444333


Q ss_pred             CCCCCCCCHHHHHHHHHhccCCccCcCCH---HHHhCCCccccC
Q 014171          188 RKPWPSISNSAKDFVKKLLVKDPRARLTA---AQALSHPWVREG  228 (429)
Q Consensus       188 ~~~~~~~~~~~~~li~~~l~~dp~~R~s~---~e~l~h~~~~~~  228 (429)
                      .  ...++..+.+++.+||+.+|.+|||+   .++++||||+..
T Consensus       222 ~--~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~~~~~~~~  263 (265)
T cd05579         222 E--DVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKNHPFFKGI  263 (265)
T ss_pred             c--cccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhcCccccCC
Confidence            2  12358999999999999999999999   999999999854

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.97  E-value=2e-30  Score=240.90  Aligned_cols=180  Identities=24%  Similarity=0.414  Sum_probs=146.3

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+||||++||+|.+++.+.  ..+++..+..++.|++.||.|||++|++|+||+|+||+++   .++.++|+|||.+..
T Consensus        81 ~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~---~~~~~~l~Dfg~~~~  155 (265)
T cd06652          81 LSIFMEHMPGGSIKDQLKSY--GALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRD---SVGNVKLGDFGASKR  155 (265)
T ss_pred             EEEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEec---CCCCEEECcCccccc
Confidence            45799999999999988654  5689999999999999999999999999999999999998   578899999999876


Q ss_pred             ccCCC----cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          119 IKPGK----KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       119 ~~~~~----~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      .....    ......++..|+|||.+.+ ..+.++|+||+||++|+|++|+.||...........+.....  .+..++.
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~  233 (265)
T cd06652         156 LQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAMAAIFKIATQPT--NPVLPPH  233 (265)
T ss_pred             cccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchHHHHHHHhcCCC--CCCCchh
Confidence            53211    1223467889999998864 458899999999999999999999987655555444433221  1122345


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhCCCccc
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR  226 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~  226 (429)
                      ++..+.++|.+|+. +|.+||+++++++|||+.
T Consensus       234 ~~~~~~~~i~~~l~-~p~~Rp~~~~il~~~~~~  265 (265)
T cd06652         234 VSDHCRDFLKRIFV-EAKLRPSADELLRHTFVH  265 (265)
T ss_pred             hCHHHHHHHHHHhc-ChhhCCCHHHHhcCcccC
Confidence            77889999999995 899999999999999974

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=1.5e-30  Score=243.31  Aligned_cols=184  Identities=27%  Similarity=0.486  Sum_probs=150.1

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+||||+.||+|.+++..   +.+++..+..++.|++.||.|||+.|++|+||+|+||+++   ..+.++|+|||.+.
T Consensus        76 ~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~---~~~~~~l~dfg~~~  149 (277)
T cd06917          76 RLWIIMEYAEGGSVRTLMKA---GPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVT---NTGNVKLCDFGVAA  149 (277)
T ss_pred             EEEEEEecCCCCcHHHHHHc---cCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEc---CCCCEEEccCCcee
Confidence            45789999999999998743   3799999999999999999999999999999999999999   47889999999988


Q ss_pred             eccCCCc-ccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          118 FIKPGKK-FQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       118 ~~~~~~~-~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      ....... .....|+..|+|||.+.+  .++.++|+||+||++|+|++|..||.+.........+....  .+.......
T Consensus       150 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~--~~~~~~~~~  227 (277)
T cd06917         150 LLNQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAFRAMMLIPKSK--PPRLEDNGY  227 (277)
T ss_pred             ecCCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChhhhhhccccCC--CCCCCcccC
Confidence            7654332 234568889999998864  34789999999999999999999997765544443322221  111111237


Q ss_pred             CHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      +.++.+++.+||+.||.+||++.+++.|+||++..
T Consensus       228 ~~~~~~~i~~~l~~~p~~R~~~~~il~~~~~~~~~  262 (277)
T cd06917         228 SKLLREFVAACLDEEPKERLSAEELLKSKWIKAHS  262 (277)
T ss_pred             CHHHHHHHHHHcCCCcccCcCHHHHhhChHhhccc
Confidence            88999999999999999999999999999998764

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.97  E-value=1.9e-30  Score=253.13  Aligned_cols=156  Identities=22%  Similarity=0.299  Sum_probs=124.0

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcc---cccccCCcccccc
Q 014171           62 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPE  138 (429)
Q Consensus        62 ~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~---~~~~g~~~y~aPE  138 (429)
                      .+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++.........   ....++..|+|||
T Consensus       210 ~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~---~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE  286 (375)
T cd05104         210 ALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLT---HGRITKICDFGLARDIRNDSNYVVKGNARLPVKWMAPE  286 (375)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEE---CCCcEEEecCccceeccCcccccccCCCCCCcceeChh
Confidence            478889999999999999999999999999999999998   4778999999999866433221   1223456799999


Q ss_pred             cccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCH
Q 014171          139 VLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA  216 (429)
Q Consensus       139 ~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~  216 (429)
                      .+.+ .++.++||||+||++|+|++ |..||.+..................  .+...+.++++++.+||+.||++|||+
T Consensus       287 ~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~  364 (375)
T cd05104         287 SIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVDSKFYKMIKEGYRML--SPECAPSEMYDIMKSCWDADPLKRPTF  364 (375)
T ss_pred             HhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCchHHHHHHHHhCccCC--CCCCCCHHHHHHHHHHccCChhHCcCH
Confidence            9864 56889999999999999998 8999977655444444443332221  223468899999999999999999999


Q ss_pred             HHHhCC
Q 014171          217 AQALSH  222 (429)
Q Consensus       217 ~e~l~h  222 (429)
                      .++++.
T Consensus       365 ~eil~~  370 (375)
T cd05104         365 KQIVQL  370 (375)
T ss_pred             HHHHHH
Confidence            999753

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.97  E-value=2.2e-30  Score=242.47  Aligned_cols=179  Identities=20%  Similarity=0.268  Sum_probs=148.1

Q ss_pred             ccceeEeeecCCCChHHHHHhhc------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCC
Q 014171           37 LRKLRRIRLCEGGELLDRILAKK------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE  104 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~------------~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~  104 (429)
                      ...|+||||++||+|.+++....            ...+++..+..++.|++.||.|||++|++||||||+||+++   .
T Consensus        81 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~---~  157 (280)
T cd05049          81 DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVG---Y  157 (280)
T ss_pred             CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEc---C
Confidence            34578999999999999996542            24588999999999999999999999999999999999998   5


Q ss_pred             CCCEEEeecccceeccCCCc---ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHH
Q 014171          105 DSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV  179 (429)
Q Consensus       105 ~~~~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i  179 (429)
                      ++.++|+|||.+........   .....+++.|+|||.+.+ .++.++||||+||++|+|++ |..||.+.........+
T Consensus       158 ~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~  237 (280)
T cd05049         158 DLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECI  237 (280)
T ss_pred             CCeEEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence            78999999999876532221   123345678999998864 45889999999999999998 99999888887777777


Q ss_pred             HhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          180 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ..+.....   ...++..+++++.+||+.||.+||++.++++
T Consensus       238 ~~~~~~~~---~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~  276 (280)
T cd05049         238 TQGRLLQR---PRTCPSEVYDIMLGCWKRDPQQRINIKDIHE  276 (280)
T ss_pred             HcCCcCCC---CCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            65543322   2467899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.97  E-value=2.7e-30  Score=243.13  Aligned_cols=178  Identities=19%  Similarity=0.284  Sum_probs=146.8

Q ss_pred             ccceeEeeecCCCChHHHHHhhc-----------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCC
Q 014171           37 LRKLRRIRLCEGGELLDRILAKK-----------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED  105 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~-----------~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~  105 (429)
                      ...|+|+||+.+|+|.+++....           ...+++..+..++.|++.||.|||++|++||||||+||+++   .+
T Consensus        80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~---~~  156 (288)
T cd05093          80 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVG---EN  156 (288)
T ss_pred             CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEc---cC
Confidence            34578999999999999986542           13589999999999999999999999999999999999998   57


Q ss_pred             CCEEEeecccceeccCCCc---ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHH
Q 014171          106 SSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVL  180 (429)
Q Consensus       106 ~~~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~  180 (429)
                      +.++|+|||.+........   .....++..|+|||.+.+ .++.++|+||+||++|+|++ |..||.+.........+.
T Consensus       157 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~  236 (288)
T cd05093         157 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECIT  236 (288)
T ss_pred             CcEEeccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            8899999999876543221   122345678999999874 45889999999999999998 999998888777777776


Q ss_pred             hcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHh
Q 014171          181 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL  220 (429)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l  220 (429)
                      .+....   ....++.++.+++.+||+.||.+|||+.+++
T Consensus       237 ~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~  273 (288)
T cd05093         237 QGRVLQ---RPRTCPKEVYDLMLGCWQREPHMRLNIKEIH  273 (288)
T ss_pred             cCCcCC---CCCCCCHHHHHHHHHHccCChhhCCCHHHHH
Confidence            655322   1235788999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]

Probab=99.97  E-value=6.7e-32  Score=240.43  Aligned_cols=208  Identities=28%  Similarity=0.449  Sum_probs=163.2

Q ss_pred             eecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 014171            5 LIGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL   84 (429)
Q Consensus         5 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~   84 (429)
                      ++..+.|+|++.+++.+.+....    ..+  ...|+||||+. ++|...+.    -.++-..+..++.|+++|++|||+
T Consensus        68 l~~~v~~~nii~l~n~ftP~~~l----~~~--~e~y~v~e~m~-~nl~~vi~----~elDH~tis~i~yq~~~~ik~lhs  136 (369)
T KOG0665|consen   68 LMKCVNHKNIISLLNVFTPQKTL----EEF--QEVYLVMELMD-ANLCQVIL----MELDHETISYILYQMLCGIKHLHS  136 (369)
T ss_pred             hhhhhcccceeeeeeccCccccH----HHH--HhHHHHHHhhh-hHHHHHHH----HhcchHHHHHHHHHHHHHHHHHHh
Confidence            44566777777777777653221    111  23578999998 68988886    357888999999999999999999


Q ss_pred             CCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhC
Q 014171           85 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCG  163 (429)
Q Consensus        85 ~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g  163 (429)
                      .||+||||||+||++.   .+..+|+.|||+|+........+..+.+..|.|||++.+ .+...+||||+||++.+|++|
T Consensus       137 ~~IihRdLkPsnivv~---~~~~lKi~dfg~ar~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~  213 (369)
T KOG0665|consen  137 AGIIHRDLKPSNIVVN---SDCTLKILDFGLARTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILG  213 (369)
T ss_pred             cceeecccCcccceec---chhheeeccchhhcccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhc
Confidence            9999999999999999   578999999999987766656677889999999999865 468889999999999999999


Q ss_pred             CCCCCCCChhHHHHHHHhcCC----------------------C---------CCCCCCC-------CCCHHHHHHHHHh
Q 014171          164 RRPFWDKTEDGIFKEVLRNKP----------------------D---------FRRKPWP-------SISNSAKDFVKKL  205 (429)
Q Consensus       164 ~~pf~~~~~~~~~~~i~~~~~----------------------~---------~~~~~~~-------~~~~~~~~li~~~  205 (429)
                      +..|.|.+..+.+.++.....                      .         ++-..|+       .-+..+++++.+|
T Consensus       214 ~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~M  293 (369)
T KOG0665|consen  214 TVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKM  293 (369)
T ss_pred             eEEecCchHHHHHHHHHHHhcCCCHHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHh
Confidence            999988766555444332111                      0         0001111       1235689999999


Q ss_pred             ccCCccCcCCHHHHhCCCccc
Q 014171          206 LVKDPRARLTAAQALSHPWVR  226 (429)
Q Consensus       206 l~~dp~~R~s~~e~l~h~~~~  226 (429)
                      |..||++|.|++++|+|||++
T Consensus       294 Lvi~pe~Risv~daL~HPY~~  314 (369)
T KOG0665|consen  294 LVIDPEKRISVDDALRHPYIK  314 (369)
T ss_pred             hccChhhcccHHHHhcCCeee
Confidence            999999999999999999997

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.97  E-value=2.5e-30  Score=239.63  Aligned_cols=177  Identities=20%  Similarity=0.259  Sum_probs=147.7

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|+||+.+|+|.+++.+.....+++..+..++.|++.||.|||+.|++||||||+||+++   .++.++|+|||.+.
T Consensus        75 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~---~~~~~~l~dfg~~~  151 (261)
T cd05072          75 PIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVS---ESLMCKIADFGLAR  151 (261)
T ss_pred             CcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEec---CCCcEEECCCccce
Confidence            357899999999999999776667799999999999999999999999999999999999998   57889999999998


Q ss_pred             eccCCCcc--cccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          118 FIKPGKKF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       118 ~~~~~~~~--~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      ........  ....++..|+|||.+.+ .++.++|+||+||++|+|++ |..||.+.........+.....   .+....
T Consensus       152 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~  228 (261)
T cd05072         152 VIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNSDVMSALQRGYR---MPRMEN  228 (261)
T ss_pred             ecCCCceeccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCC---CCCCCC
Confidence            76433221  22345668999998864 45889999999999999998 9999988777776666654432   223346


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHh
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQAL  220 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l  220 (429)
                      ++.++.+++.+||..+|++||++++++
T Consensus       229 ~~~~~~~li~~~l~~~p~~Rp~~~~i~  255 (261)
T cd05072         229 CPDELYDIMKTCWKEKAEERPTFDYLQ  255 (261)
T ss_pred             CCHHHHHHHHHHccCCcccCcCHHHHH
Confidence            789999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.97  E-value=1.5e-30  Score=244.64  Aligned_cols=183  Identities=31%  Similarity=0.450  Sum_probs=144.4

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|+||+.++.+..+. . +...+++..+..++.||+.||.|||++|++|+||+|+||+++   .++.++|+|||.+.
T Consensus        74 ~~~iv~e~~~~~~l~~~~-~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~---~~~~~kl~d~g~~~  148 (288)
T cd07833          74 RLYLVFEYVERTLLELLE-A-SPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVS---ESGVLKLCDFGFAR  148 (288)
T ss_pred             EEEEEEecCCCCHHHHHH-h-cCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCCEEEEeeeccc
Confidence            457899999986665544 2 235699999999999999999999999999999999999999   57899999999988


Q ss_pred             eccCCC--cccccccCCcccccccccCC--CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCC--------
Q 014171          118 FIKPGK--KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD--------  185 (429)
Q Consensus       118 ~~~~~~--~~~~~~g~~~y~aPE~~~~~--~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~--------  185 (429)
                      ......  ......++..|+|||++.+.  ++.++|+||+|+++|+|++|++||.+.........+......        
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (288)
T cd07833         149 ALRARPASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQEL  228 (288)
T ss_pred             ccCCCccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhh
Confidence            765443  33445678899999998654  478999999999999999999999876554443332211100        


Q ss_pred             -----------CCCC---------CCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          186 -----------FRRK---------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       186 -----------~~~~---------~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                                 ++..         ....++.+++++|.+||..+|++|||++++++||||
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~f  288 (288)
T cd07833         229 FSSNPRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQHPYF  288 (288)
T ss_pred             cccCccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhcCCCC
Confidence                       0000         011247889999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.97  E-value=1.4e-30  Score=250.58  Aligned_cols=187  Identities=28%  Similarity=0.413  Sum_probs=148.2

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|+||+. ++|.+++...  +.+++..+..++.|++.||.|||++|++||||||+||+++   .++.+||+|||++..
T Consensus        84 ~~lv~e~~~-~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~---~~~~~kL~Dfg~~~~  157 (337)
T cd07858          84 VYIVYELMD-TDLHQIIRSS--QTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLN---ANCDLKICDFGLART  157 (337)
T ss_pred             EEEEEeCCC-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc---CCCCEEECcCccccc
Confidence            468999996 7898888543  6799999999999999999999999999999999999998   478899999999886


Q ss_pred             ccCC-CcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHh--------------
Q 014171          119 IKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR--------------  181 (429)
Q Consensus       119 ~~~~-~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~--------------  181 (429)
                      .... .......++..|+|||.+..  ..+.++|+||+||++|+|++|++||.+.+.......+..              
T Consensus       158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (337)
T cd07858         158 TSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGFIR  237 (337)
T ss_pred             cCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcC
Confidence            6443 22234567889999998753  468899999999999999999999976654332222211              


Q ss_pred             ---------cCCCCC----CCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCC
Q 014171          182 ---------NKPDFR----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA  231 (429)
Q Consensus       182 ---------~~~~~~----~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~  231 (429)
                               .....+    ....+.++.++.++|.+||+.+|.+|||++++++||||+.....
T Consensus       238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~~~  300 (337)
T cd07858         238 NEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLHDP  300 (337)
T ss_pred             chhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhcCc
Confidence                     000000    01134678999999999999999999999999999999875443

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.97  E-value=2.2e-30  Score=239.32  Aligned_cols=176  Identities=21%  Similarity=0.254  Sum_probs=146.9

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|+||+++|+|.+++.+.....+++..+..++.|++.||.|||++|++||||||+||+++   .++.+||+|||++.
T Consensus        74 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~---~~~~~kl~dfg~~~  150 (256)
T cd05082          74 GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVS---EDNVAKVSDFGLTK  150 (256)
T ss_pred             ceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEc---CCCcEEecCCccce
Confidence            357899999999999999766555689999999999999999999999999999999999998   57899999999987


Q ss_pred             eccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      ......  ....++..|+|||++.+ .++.++|+||+||++|+|++ |+.||...........+..+..   ....+.++
T Consensus       151 ~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~  225 (256)
T cd05082         151 EASSTQ--DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK---MDAPDGCP  225 (256)
T ss_pred             eccccC--CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC---CCCCCCCC
Confidence            654322  23344568999998865 45889999999999999997 9999987777666666654432   22334678


Q ss_pred             HHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          196 NSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      +.+.+++.+||+.+|++|||+.++++
T Consensus       226 ~~~~~li~~~l~~~p~~Rpt~~~l~~  251 (256)
T cd05082         226 PVVYDVMKQCWHLDAATRPSFLQLRE  251 (256)
T ss_pred             HHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            99999999999999999999999874

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.97  E-value=2.5e-30  Score=238.49  Aligned_cols=183  Identities=26%  Similarity=0.445  Sum_probs=153.9

Q ss_pred             ccceeEeeecCCCChHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKK--DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG  114 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg  114 (429)
                      ...++|+||+++++|.+++.+..  +..+++..+..++.|++.||.|||++|++|+||+|+||+++   .++.++|+|||
T Consensus        72 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~---~~~~~~l~d~~  148 (258)
T cd08215          72 GKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLT---SNGLVKLGDFG  148 (258)
T ss_pred             CEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEc---CCCcEEECCcc
Confidence            34568999999999999987653  47899999999999999999999999999999999999998   47889999999


Q ss_pred             cceeccCCC-cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCC
Q 014171          115 LSDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP  192 (429)
Q Consensus       115 ~a~~~~~~~-~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  192 (429)
                      .+....... ......|++.|+|||.+.+ ..+.++|+||+|+++++|++|+.||..................   ....
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~  225 (258)
T cd08215         149 ISKVLSSTVDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENLLELALKILKGQYP---PIPS  225 (258)
T ss_pred             ceeecccCcceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcHHHHHHHHhcCCCC---CCCC
Confidence            987665433 2234567889999998764 4588999999999999999999999877766666665544322   2223


Q ss_pred             CCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          193 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       193 ~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                      .++..+.+++.+||..+|.+|||+.++++||||
T Consensus       226 ~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~~~~  258 (258)
T cd08215         226 QYSSELRNLVSSLLQKDPEERPSIAQILQSPFI  258 (258)
T ss_pred             CCCHHHHHHHHHHcCCChhhCcCHHHHhcCCCC
Confidence            678999999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.97  E-value=1.6e-30  Score=245.40  Aligned_cols=190  Identities=28%  Similarity=0.475  Sum_probs=152.3

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|+||++||+|.+++.+   ..+++..+..++.|++.||.|||++|++|+||+|+||+++   .++.++|+|||++.
T Consensus        90 ~~~lv~e~~~~~~L~~~~~~---~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~---~~~~~kL~dfg~~~  163 (293)
T cd06647          90 ELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGFCA  163 (293)
T ss_pred             cEEEEEecCCCCcHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEc---CCCCEEEccCccee
Confidence            45789999999999998854   3688999999999999999999999999999999999998   47889999999887


Q ss_pred             eccCCCc-ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~~~~~-~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      ....... .....+++.|+|||.+.. .++.++|+||+||++|++++|+.||...+.......+..... .....+..++
T Consensus       164 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~~~~~~~~~-~~~~~~~~~~  242 (293)
T cd06647         164 QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGT-PELQNPEKLS  242 (293)
T ss_pred             cccccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhheeehhcCCC-CCCCCccccC
Confidence            6543322 233467889999998864 458899999999999999999999977655443332222211 1111233568


Q ss_pred             HHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCCCCC
Q 014171          196 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI  234 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~~~~  234 (429)
                      ..++++|.+||..+|.+||++.+++.|+||+.....+..
T Consensus       243 ~~l~~li~~~l~~~p~~Rp~~~~il~h~~~~~~~~~~~~  281 (293)
T cd06647         243 AIFRDFLNRCLEMDVEKRGSAKELLQHPFLKIAKPLSSL  281 (293)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcCHHHhcCcccccc
Confidence            889999999999999999999999999999987654443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.97  E-value=1.8e-30  Score=240.67  Aligned_cols=184  Identities=26%  Similarity=0.453  Sum_probs=152.1

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~-~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      ...|+|+||+.+++|.+++...  ..+++..+..++.|++.||.|||+ .|++|+||+|+||+++   .++.++|+|||.
T Consensus        72 ~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~---~~~~~~l~df~~  146 (264)
T cd06623          72 GEISIVLEYMDGGSLADLLKKV--GKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLIN---SKGEVKIADFGI  146 (264)
T ss_pred             CeEEEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEEC---CCCCEEEccCcc
Confidence            4457899999999999999654  679999999999999999999999 9999999999999998   578999999999


Q ss_pred             ceeccCCCcc-cccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCCCCCCCC---hhHHHHHHHhcCCCCCCCC
Q 014171          116 SDFIKPGKKF-QDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKT---EDGIFKEVLRNKPDFRRKP  190 (429)
Q Consensus       116 a~~~~~~~~~-~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~---~~~~~~~i~~~~~~~~~~~  190 (429)
                      +......... ....++..|+|||.+.+. ++.++|+||+|+++|+|++|+.||....   .......+.....   ...
T Consensus       147 ~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~---~~~  223 (264)
T cd06623         147 SKVLENTLDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAICDGPP---PSL  223 (264)
T ss_pred             ceecccCCCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHhcCCC---CCC
Confidence            8876543332 245678899999998654 4789999999999999999999997763   3334444443221   122


Q ss_pred             CCC-CCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          191 WPS-ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       191 ~~~-~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      ... ++..+.++|.+||..+|.+||++.++++|||++..
T Consensus       224 ~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~~~~~~~  262 (264)
T cd06623         224 PAEEFSPEFRDFISACLQKDPKKRPSAAELLQHPFIKKA  262 (264)
T ss_pred             CcccCCHHHHHHHHHHccCChhhCCCHHHHHhCHHHHhc
Confidence            233 78999999999999999999999999999999764

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.97  E-value=2.7e-30  Score=238.87  Aligned_cols=180  Identities=24%  Similarity=0.300  Sum_probs=150.8

Q ss_pred             ccceeEeeecCCCChHHHHHhhc-------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEE
Q 014171           37 LRKLRRIRLCEGGELLDRILAKK-------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK  109 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~-------~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~k  109 (429)
                      ...++|||||++|+|.+++....       ...+++..+..++.|++.||.|||++|++|+||+|+||+++   .++.++
T Consensus        69 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~---~~~~~~  145 (262)
T cd00192          69 EPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVG---EDLVVK  145 (262)
T ss_pred             CceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEEC---CCCcEE
Confidence            34578999999999999986542       36799999999999999999999999999999999999999   468999


Q ss_pred             EeecccceeccCCC---cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCC
Q 014171          110 ATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKP  184 (429)
Q Consensus       110 L~Dfg~a~~~~~~~---~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~  184 (429)
                      |+|||.+.......   ......++..|+|||.+.. .++.++|+||+|+++|+|++ |..||...........+..+..
T Consensus       146 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~  225 (262)
T cd00192         146 ISDFGLSRDVYDDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRKGYR  225 (262)
T ss_pred             EcccccccccccccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC
Confidence            99999998765432   2234456889999998864 56889999999999999999 6999988887777777765332


Q ss_pred             CCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          185 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       185 ~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      .   .....++.++.+++.+||+.+|.+|||+.+++++
T Consensus       226 ~---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~  260 (262)
T cd00192         226 L---PKPEYCPDELYELMLSCWQLDPEDRPTFSELVER  260 (262)
T ss_pred             C---CCCccCChHHHHHHHHHccCCcccCcCHHHHHHh
Confidence            1   2234578999999999999999999999999864

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.97  E-value=2.6e-30  Score=243.74  Aligned_cols=189  Identities=32%  Similarity=0.590  Sum_probs=154.5

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+||||+++++|.+++..   ..+++..+..++.|++.||.|||+.|++|+||+|+||+++   .++.++|+|||++
T Consensus        90 ~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~---~~~~~~l~dfg~~  163 (292)
T cd06657          90 DELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFC  163 (292)
T ss_pred             CEEEEEEecCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCCEEEcccccc
Confidence            345789999999999987633   4689999999999999999999999999999999999998   4678999999988


Q ss_pred             eeccCCC-cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~~~~~~-~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      ....... ......|++.|+|||.+.+ .++.++|+||+|+++|+|++|..||.+.........+....+... .....+
T Consensus       164 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~  242 (292)
T cd06657         164 AQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPPKL-KNLHKV  242 (292)
T ss_pred             eecccccccccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhhCCccc-CCcccC
Confidence            7654322 2233567889999998864 458899999999999999999999987766655555544332221 123457


Q ss_pred             CHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCCC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS  232 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~~  232 (429)
                      +..+.+++.+||..+|.+||++.++++||||.....++
T Consensus       243 ~~~l~~li~~~l~~~P~~R~~~~~ll~~~~~~~~~~~~  280 (292)
T cd06657         243 SPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPS  280 (292)
T ss_pred             CHHHHHHHHHHHhCCcccCcCHHHHhcChHHhccCCCc
Confidence            89999999999999999999999999999999876543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.97  E-value=2.1e-30  Score=240.33  Aligned_cols=183  Identities=29%  Similarity=0.471  Sum_probs=146.6

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..++|+||+.+++|.+++.+.  ..+++..+..++.|++.||.|||+.|++|+||+|+||+++   .++.+||+|||.+.
T Consensus        73 ~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~---~~~~~kl~d~g~~~  147 (264)
T cd06626          73 KVYIFMEYCSGGTLEELLEHG--RILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLD---HNGVIKLGDFGCAV  147 (264)
T ss_pred             EEEEEEecCCCCcHHHHHhhc--CCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEccccccc
Confidence            357899999999999988543  5689999999999999999999999999999999999999   47889999999987


Q ss_pred             eccCCCcc-----cccccCCcccccccccCC----CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCC
Q 014171          118 FIKPGKKF-----QDIVGSAYYVAPEVLKRK----SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR  188 (429)
Q Consensus       118 ~~~~~~~~-----~~~~g~~~y~aPE~~~~~----~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~  188 (429)
                      ........     ....+++.|+|||.+.+.    .+.++|+||+|+++|++++|+.||.....................
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~  227 (264)
T cd06626         148 KLKNNTTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNEFQIMFHVGAGHKPPI  227 (264)
T ss_pred             ccCCCCCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcchHHHHHHHhcCCCCCC
Confidence            66433221     234678899999998643    478899999999999999999999765433322222222222222


Q ss_pred             CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          189 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       189 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                      +....++..+.++|.+||+.+|.+|||+.+++.|||+
T Consensus       228 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~~~~~  264 (264)
T cd06626         228 PDSLQLSPEGKDFLDRCLESDPKKRPTASELLQHPFV  264 (264)
T ss_pred             CcccccCHHHHHHHHHHccCCcccCCCHHHHhcCCCC
Confidence            2233458999999999999999999999999999996

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.97  E-value=3.7e-30  Score=244.48  Aligned_cols=183  Identities=25%  Similarity=0.420  Sum_probs=149.1

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|+||+. |++.+.+... ...+++..+..++.|++.||.|||+.||+|+||+|+||+++   .++.++|+|||++
T Consensus        88 ~~~~lv~e~~~-g~l~~~~~~~-~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~---~~~~~kL~dfg~~  162 (307)
T cd06607          88 HTAWLVMEYCL-GSASDILEVH-KKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLT---EPGTVKLADFGSA  162 (307)
T ss_pred             CeEEEEHHhhC-CCHHHHHHHc-ccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEC---CCCCEEEeecCcc
Confidence            34578999997 6787777543 35799999999999999999999999999999999999998   5788999999998


Q ss_pred             eeccCCCcccccccCCccccccccc----CCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCC
Q 014171          117 DFIKPGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP  192 (429)
Q Consensus       117 ~~~~~~~~~~~~~g~~~y~aPE~~~----~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  192 (429)
                      ......   ....+++.|+|||++.    +.++.++||||+|+++|+|++|+.||.+.........+......  .....
T Consensus       163 ~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~~~~~~~~~~~--~~~~~  237 (307)
T cd06607         163 SLVSPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDSP--TLSSN  237 (307)
T ss_pred             eecCCC---CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHHHHHHhcCCCC--CCCch
Confidence            765432   2446788999999873    34578999999999999999999999887766655544433221  11112


Q ss_pred             CCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          193 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       193 ~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      ..+..++++|.+||+.+|.+||++.+++.||||....
T Consensus       238 ~~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~  274 (307)
T cd06607         238 DWSDYFRNFVDSCLQKIPQDRPSSEELLKHRFVLRER  274 (307)
T ss_pred             hhCHHHHHHHHHHhcCChhhCcCHHHHhcChhhcccC
Confidence            4678899999999999999999999999999998764

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.97  E-value=3.6e-30  Score=238.06  Aligned_cols=177  Identities=21%  Similarity=0.293  Sum_probs=146.2

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+||||+.+|+|.+++.... ..+++..+..++.||+.||.|||+.|++|+||||+||+++   .++.+||+|||.+..
T Consensus        74 ~~lv~e~~~~~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~---~~~~~kl~d~g~~~~  149 (256)
T cd05113          74 IYIVTEYMSNGCLLNYLREHG-KRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVD---DQGCVKVSDFGLSRY  149 (256)
T ss_pred             cEEEEEcCCCCcHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEc---CCCCEEECCCcccee
Confidence            478999999999999886543 4789999999999999999999999999999999999998   478899999999876


Q ss_pred             ccCCCcc--cccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          119 IKPGKKF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       119 ~~~~~~~--~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      .......  ....++..|+|||.+.+ .++.++|+||+||++|+|++ |..||...........+..+......   ...
T Consensus       150 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~  226 (256)
T cd05113         150 VLDDEYTSSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLRLYRP---HLA  226 (256)
T ss_pred             cCCCceeecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCCCCCC---CCC
Confidence            5433221  12234567999999864 56889999999999999998 99999877777777766655433222   346


Q ss_pred             CHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      +..+++++.+||+.+|.+||++.+++.+
T Consensus       227 ~~~~~~li~~cl~~~p~~Rp~~~~ll~~  254 (256)
T cd05113         227 SEKVYAIMYSCWHEKAEERPTFQQLLSS  254 (256)
T ss_pred             CHHHHHHHHHHcCCCcccCCCHHHHHHh
Confidence            8899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.97  E-value=4e-30  Score=236.45  Aligned_cols=179  Identities=32%  Similarity=0.611  Sum_probs=151.9

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+||||+.+++|.+++...  ..+++..+..++.|++.||.|||+++++|+||+|+||+++   ..+.++|+|||.+.
T Consensus        67 ~~~~v~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~---~~~~~~l~d~~~~~  141 (250)
T cd05123          67 KLYLVLEYAPGGELFSHLSKE--GRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLD---ADGHIKLTDFGLAK  141 (250)
T ss_pred             eeEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEc---CCCcEEEeecCcce
Confidence            357899999999999999554  5799999999999999999999999999999999999998   47789999999987


Q ss_pred             eccCC-CcccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIKPG-KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~~~-~~~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      ..... .......++..|+|||...+. .+.++|+||+|+++|++++|+.||...........+......++    ...+
T Consensus       142 ~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~  217 (250)
T cd05123         142 ELSSEGSRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILKDPLRFP----EFLS  217 (250)
T ss_pred             ecccCCCcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCCC----CCCC
Confidence            66443 233455678899999988654 47889999999999999999999987776666666655433322    3468


Q ss_pred             HHHHHHHHHhccCCccCcCCH---HHHhCCCcc
Q 014171          196 NSAKDFVKKLLVKDPRARLTA---AQALSHPWV  225 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~---~e~l~h~~~  225 (429)
                      ..+.+++.+||..||.+||++   +++++||||
T Consensus       218 ~~l~~~i~~~l~~~p~~R~~~~~~~~l~~~~~f  250 (250)
T cd05123         218 PEARDLISGLLQKDPTKRLGSGGAEEIKAHPFF  250 (250)
T ss_pred             HHHHHHHHHHhcCCHhhCCCcccHHHHHhCCCC
Confidence            999999999999999999999   999999998

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.97  E-value=2.4e-30  Score=248.30  Aligned_cols=190  Identities=28%  Similarity=0.421  Sum_probs=154.6

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+||||+. ++|.+++.+.  ..+++..+..++.||+.||.|||++||+||||||+||+++   .++.++|+|||.+..
T Consensus        79 ~~lv~e~~~-~~l~~~l~~~--~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~---~~~~~~L~dfg~~~~  152 (330)
T cd07834          79 VYIVTELME-TDLHKVIKSP--QPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVN---SNCDLKICDFGLARG  152 (330)
T ss_pred             eEEEecchh-hhHHHHHhCC--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEcccCceEe
Confidence            468999998 5888888543  5899999999999999999999999999999999999999   468999999999987


Q ss_pred             ccCCC----cccccccCCcccccccccCC--CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCC---
Q 014171          119 IKPGK----KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK---  189 (429)
Q Consensus       119 ~~~~~----~~~~~~g~~~y~aPE~~~~~--~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~---  189 (429)
                      .....    ......+++.|+|||.+.+.  .+.++|+||+|+++|+|++|++||.+.+..+....+..........   
T Consensus       153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  232 (330)
T cd07834         153 VDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLK  232 (330)
T ss_pred             ecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhh
Confidence            65443    23445678899999998654  5889999999999999999999998887766655554422111100   


Q ss_pred             ------------------------CCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCCCCC
Q 014171          190 ------------------------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI  234 (429)
Q Consensus       190 ------------------------~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~~~~  234 (429)
                                              ..+.++..+.++|.+||+.+|.+||+++++++||||+........
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~~~~~  301 (330)
T cd07834         233 FITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHDPEDE  301 (330)
T ss_pred             hccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcccccC
Confidence                                    123467889999999999999999999999999999987655433

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.97  E-value=2.6e-30  Score=242.22  Aligned_cols=184  Identities=32%  Similarity=0.469  Sum_probs=148.3

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|+||+. ++|.+++... ...+++..+..++.|++.||.|||+.||+|+||+|+||+++   .++.++|+|||.+
T Consensus        71 ~~~~~v~e~~~-~~l~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~---~~~~~~l~df~~~  145 (283)
T cd05118          71 GDLYLVFEFMD-TDLYKLIKDR-QRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLIN---TEGVLKLADFGLA  145 (283)
T ss_pred             CCEEEEEeccC-CCHHHHHHhh-cccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEEC---CCCcEEEeeeeee
Confidence            34578999997 4888887654 36799999999999999999999999999999999999998   4788999999998


Q ss_pred             eeccCCC-cccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCC-------
Q 014171          117 DFIKPGK-KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF-------  186 (429)
Q Consensus       117 ~~~~~~~-~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~-------  186 (429)
                      ....... ......++..|+|||.+.+  ..+.++|+||+|+++|+|++|+.||.+.+..+....+.......       
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (283)
T cd05118         146 RSFGSPVRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPK  225 (283)
T ss_pred             EecCCCcccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhccc
Confidence            7765443 2334567889999998864  35889999999999999999999998777655544443221110       


Q ss_pred             ------------C-------CCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          187 ------------R-------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       187 ------------~-------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                                  +       ...++.++.+++++|.+||+.||.+||++.+++.||||
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~~~~~  283 (283)
T cd05118         226 FTSLARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALAHPYF  283 (283)
T ss_pred             chhhhhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhhCCCC
Confidence                        0       01123467899999999999999999999999999997

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.97  E-value=2.1e-30  Score=249.97  Aligned_cols=184  Identities=30%  Similarity=0.487  Sum_probs=149.6

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|+||+ |++|.+++..   ..+++..+..++.|++.||.|||+.||+||||+|+||+++   .++.++|+|||.+..
T Consensus        95 ~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~---~~~~~kL~dfg~~~~  167 (343)
T cd07851          95 VYLVTHLM-GADLNNIVKC---QKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVN---EDCELKILDFGLARH  167 (343)
T ss_pred             EEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEC---CCCCEEEcccccccc
Confidence            46899998 6799888743   4799999999999999999999999999999999999998   478899999999876


Q ss_pred             ccCCCcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCC---------
Q 014171          119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR---------  187 (429)
Q Consensus       119 ~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~---------  187 (429)
                      ....  .....++..|+|||.+.+  .++.++|+||+||++|+|++|+.||.+.........+.......+         
T Consensus       168 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  245 (343)
T cd07851         168 TDDE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEELLQKISS  245 (343)
T ss_pred             cccc--ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCCHHHHhhccc
Confidence            5432  234567889999998754  457899999999999999999999987776655555443221100         


Q ss_pred             --------------C----CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCC
Q 014171          188 --------------R----KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA  231 (429)
Q Consensus       188 --------------~----~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~  231 (429)
                                    .    ..+...+..+.++|.+||+.+|.+|||+.++++||||+.....
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h~~~~~~~~~  307 (343)
T cd07851         246 ESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAHPYLAEYHDP  307 (343)
T ss_pred             hhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcCCCccccCCC
Confidence                          0    0112468899999999999999999999999999999976543

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.97  E-value=4.2e-30  Score=242.21  Aligned_cols=178  Identities=19%  Similarity=0.259  Sum_probs=146.2

Q ss_pred             cceeEeeecCCCChHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecC
Q 014171           38 RKLRRIRLCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK  103 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~  103 (429)
                      ..++||||+.+|+|.+++....              .+.+++..+..++.||+.||.|||++||+||||||+||+++   
T Consensus        81 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~---  157 (291)
T cd05094          81 PLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVG---  157 (291)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEc---
Confidence            3578999999999999996542              24589999999999999999999999999999999999998   


Q ss_pred             CCCCEEEeecccceeccCCCc---ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHH
Q 014171          104 EDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE  178 (429)
Q Consensus       104 ~~~~~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~  178 (429)
                      .++.++|+|||++........   .....++..|+|||.+.+ .++.++|+||+||++|+|++ |+.||...+.......
T Consensus       158 ~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~  237 (291)
T cd05094         158 ANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIEC  237 (291)
T ss_pred             cCCcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            578999999999876543221   233456788999998864 45889999999999999998 9999988777776666


Q ss_pred             HHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          179 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       179 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      +..+....   .....+..+.+++.+||+.+|.+|||+.++++
T Consensus       238 ~~~~~~~~---~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~  277 (291)
T cd05094         238 ITQGRVLE---RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYK  277 (291)
T ss_pred             HhCCCCCC---CCccCCHHHHHHHHHHcccChhhCcCHHHHHH
Confidence            65544322   22346889999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.97  E-value=1e-30  Score=260.56  Aligned_cols=197  Identities=18%  Similarity=0.306  Sum_probs=168.5

Q ss_pred             eecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhc--------CCC----CCHHHHHHHH
Q 014171            5 LIGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKK--------DSR----YTEKDAAVVV   72 (429)
Q Consensus         5 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--------~~~----l~~~~~~~i~   72 (429)
                      |++++.|+|++.+++.+..-            ...|+|+|||..|||.++|....        +..    |+..+...|+
T Consensus       542 Lla~l~H~nIVrLlGVC~~~------------~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA  609 (774)
T KOG1026|consen  542 LLAELQHPNIVRLLGVCREG------------DPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIA  609 (774)
T ss_pred             HHHhccCCCeEEEEEEEccC------------CeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHH
Confidence            57788999999999977642            23357899999999999996642        122    8899999999


Q ss_pred             HHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccc---cccCCcccccccc-cCCCCCCc
Q 014171           73 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD---IVGSAYYVAPEVL-KRKSGPES  148 (429)
Q Consensus        73 ~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~---~~g~~~y~aPE~~-~~~~~~~~  148 (429)
                      .||+.|+.||-++.+|||||-..|+|++   ++..|||+|||+++.+-....+..   ..-..+|||||.+ .++++.+|
T Consensus       610 ~QIAaGM~YLs~~~FVHRDLATRNCLVg---e~l~VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteS  686 (774)
T KOG1026|consen  610 TQIAAGMEYLSSHHFVHRDLATRNCLVG---ENLVVKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTES  686 (774)
T ss_pred             HHHHHHHHHHHhCcccccchhhhhceec---cceEEEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchh
Confidence            9999999999999999999999999999   689999999999987754443322   2335689999976 58899999


Q ss_pred             chHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHH
Q 014171          149 DVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA  219 (429)
Q Consensus       149 DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~  219 (429)
                      ||||+||+|||+++ |+.||++.+.++.+..+..+.. .+.  +..+|.++.+|+..||+.+|.+||++.++
T Consensus       687 DVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~l-L~~--Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI  755 (774)
T KOG1026|consen  687 DVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQL-LSC--PENCPTEVYSLMLECWNENPKRRPSFKEI  755 (774)
T ss_pred             hhhhhhhhhhhhhccccCcccccchHHHHHHHHcCCc-ccC--CCCCCHHHHHHHHHHhhcCcccCCCHHHH
Confidence            99999999999998 9999999999999999998886 333  35789999999999999999999999986

>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]

Probab=99.97  E-value=3.9e-31  Score=240.78  Aligned_cols=189  Identities=29%  Similarity=0.407  Sum_probs=149.2

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecC--------------
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK--------------  103 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~--------------  103 (429)
                      ..++|+|.+ |-|+.+++..+.-.+++...++.++.|+++++.+||+.+++|.||||+|||+.+..              
T Consensus       165 hiCivfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~  243 (415)
T KOG0671|consen  165 HICIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFI  243 (415)
T ss_pred             ceEEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCcccee
Confidence            357788888 45999999887778899999999999999999999999999999999999987421              


Q ss_pred             ---CCCCEEEeecccceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHH---
Q 014171          104 ---EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF---  176 (429)
Q Consensus       104 ---~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~---  176 (429)
                         ++..|+++|||.|.....  ...+++.|..|+|||++.+ +.+.++||||+||||+|++||...|++....+-+   
T Consensus       244 r~~ks~~I~vIDFGsAtf~~e--~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMM  321 (415)
T KOG0671|consen  244 RPLKSTAIKVIDFGSATFDHE--HHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMM  321 (415)
T ss_pred             ccCCCcceEEEecCCcceecc--CcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHH
Confidence               234689999999976543  3467889999999999886 6799999999999999999999999887654422   


Q ss_pred             HHHHhcCCCC--C-----------CCCCCC-----------------------C---CHHHHHHHHHhccCCccCcCCHH
Q 014171          177 KEVLRNKPDF--R-----------RKPWPS-----------------------I---SNSAKDFVKKLLVKDPRARLTAA  217 (429)
Q Consensus       177 ~~i~~~~~~~--~-----------~~~~~~-----------------------~---~~~~~~li~~~l~~dp~~R~s~~  217 (429)
                      ++|+...+..  .           .-.|+.                       .   -.++-+||++||..||.+|+|+.
T Consensus       322 erIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~~RiTl~  401 (415)
T KOG0671|consen  322 ERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFDPARRITLR  401 (415)
T ss_pred             HHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccCccccccHH
Confidence            2222211100  0           001111                       0   12467899999999999999999


Q ss_pred             HHhCCCccccCC
Q 014171          218 QALSHPWVREGG  229 (429)
Q Consensus       218 e~l~h~~~~~~~  229 (429)
                      |+|.||||+...
T Consensus       402 EAL~HpFF~~~~  413 (415)
T KOG0671|consen  402 EALSHPFFARLT  413 (415)
T ss_pred             HHhcCHHhhcCC
Confidence            999999998753

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.97  E-value=4.6e-30  Score=235.78  Aligned_cols=183  Identities=32%  Similarity=0.522  Sum_probs=149.5

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...++|+||+.|++|.+++.... ..+++..+..++.|++.||.|||.+|++||||+|+||+++   .++.++|+|||.+
T Consensus        70 ~~~~l~~e~~~~~~L~~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~---~~~~~~l~d~~~~  145 (253)
T cd05122          70 DELWIVMEFCSGGSLKDLLKSTN-QTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLT---SDGEVKLIDFGLS  145 (253)
T ss_pred             CeEEEEEecCCCCcHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEc---cCCeEEEeecccc
Confidence            34678999999999999886543 5799999999999999999999999999999999999999   4788999999998


Q ss_pred             eeccCCCcccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          117 DFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       117 ~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      .............++..|+|||.+.+. .+.++|+||+|+++|+|++|+.||...+................ .....++
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  224 (253)
T cd05122         146 AQLSDTKARNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKALFKIATNGPPGL-RNPEKWS  224 (253)
T ss_pred             ccccccccccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcCCCCc-CcccccC
Confidence            876654433455788899999998644 47899999999999999999999977755444444333221111 1111237


Q ss_pred             HHHHHHHHHhccCCccCcCCHHHHhCCCc
Q 014171          196 NSAKDFVKKLLVKDPRARLTAAQALSHPW  224 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~~e~l~h~~  224 (429)
                      ..+.++|.+||+.||.+|||+.++++|||
T Consensus       225 ~~~~~~i~~~l~~~p~~R~t~~~~l~~~~  253 (253)
T cd05122         225 DEFKDFLKKCLQKNPEKRPTAEQLLKHPF  253 (253)
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHhcCCC
Confidence            89999999999999999999999999998

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.97  E-value=4.6e-30  Score=237.20  Aligned_cols=177  Identities=20%  Similarity=0.325  Sum_probs=146.3

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+||||++||+|.+++.... +.+++..+..++.|++.||.|||++||+|+||+|+||+++   .++.++|+|||.+.
T Consensus        73 ~~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~---~~~~~kl~d~g~~~  148 (256)
T cd05114          73 PLYIVTEFMENGCLLNYLRQRQ-GKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVS---STGVVKVSDFGMTR  148 (256)
T ss_pred             CEEEEEEcCCCCcHHHHHHhCc-cCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEc---CCCeEEECCCCCcc
Confidence            3578999999999999886543 4689999999999999999999999999999999999998   47789999999987


Q ss_pred             eccCCCcc--cccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          118 FIKPGKKF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       118 ~~~~~~~~--~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      ........  ....++..|+|||.+.+ .++.++|+||+|+++|+|++ |+.||...+..+....+..+.....+   ..
T Consensus       149 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~---~~  225 (256)
T cd05114         149 YVLDDEYTSSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSNYEVVEMISRGFRLYRP---KL  225 (256)
T ss_pred             ccCCCceeccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCCCC---CC
Confidence            65432221  12234567999999864 45889999999999999999 99999888887777777765432222   23


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      .+..+.+++.+||+.+|.+||+++++++
T Consensus       226 ~~~~~~~li~~c~~~~p~~Rps~~~l~~  253 (256)
T cd05114         226 ASMTVYEVMYSCWHEKPEGRPTFAELLR  253 (256)
T ss_pred             CCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            6788999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.97  E-value=3.9e-30  Score=238.24  Aligned_cols=181  Identities=25%  Similarity=0.418  Sum_probs=149.3

Q ss_pred             cceeEeeecCCCChHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           38 RKLRRIRLCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      ..++|+||+.+++|.+++...  ....+++..+..++.|++.||.|||+.|++|+||+|+||+++    .+.++|+|||.
T Consensus        76 ~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~----~~~~~l~d~g~  151 (260)
T cd08222          76 AFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLK----NNLLKIGDFGV  151 (260)
T ss_pred             ceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEee----cCCEeecccCc
Confidence            356899999999999888642  345799999999999999999999999999999999999997    35699999999


Q ss_pred             ceeccCCC-cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          116 SDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       116 a~~~~~~~-~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      +....... ......|++.|+|||.+.+ .++.++|+||+|+++|+|++|..||.+.........+..+...   .....
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~  228 (260)
T cd08222         152 SRLLMGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNFLSVVLRIVEGPTP---SLPET  228 (260)
T ss_pred             eeecCCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCC---CCcch
Confidence            87654322 2334567889999998764 4577899999999999999999999777666655555443321   12235


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                      ++.++.++|.+||..+|++||++.++++||||
T Consensus       229 ~~~~~~~li~~~l~~~p~~Rp~~~~il~~~~~  260 (260)
T cd08222         229 YSRQLNSIMQSMLNKDPSLRPSAAEILRNPFI  260 (260)
T ss_pred             hcHHHHHHHHHHhcCChhhCcCHHHHhhCCCC
Confidence            78899999999999999999999999999997

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.97  E-value=4.1e-30  Score=243.85  Aligned_cols=180  Identities=19%  Similarity=0.213  Sum_probs=140.6

Q ss_pred             cceeEeeecCCCChHHHHHhhc-----------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEe
Q 014171           38 RKLRRIRLCEGGELLDRILAKK-----------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK  100 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~-----------------~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~  100 (429)
                      ..|+|||||.+|+|.+++....                 ...+++..+..++.||+.||.|||++||+||||||+||+++
T Consensus        93 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~ivH~dlkp~Nill~  172 (304)
T cd05096          93 PLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFVHRDLATRNCLVG  172 (304)
T ss_pred             ceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCccccCcchhheEEc
Confidence            3578999999999999885432                 12467888999999999999999999999999999999998


Q ss_pred             ecCCCCCEEEeecccceeccCCCc---ccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh--CCCCCCCCChhH
Q 014171          101 SAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC--GRRPFWDKTEDG  174 (429)
Q Consensus       101 ~~~~~~~~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~--g~~pf~~~~~~~  174 (429)
                         .++.+||+|||++........   .....++..|+|||++. +.++.++||||+||++|+|++  +..||.+.+...
T Consensus       173 ---~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~  249 (304)
T cd05096         173 ---ENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTDEQ  249 (304)
T ss_pred             ---CCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCHHH
Confidence               578899999999976543322   12334577899999875 456889999999999999986  667887766665


Q ss_pred             HHHHHHhc----CCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHh
Q 014171          175 IFKEVLRN----KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL  220 (429)
Q Consensus       175 ~~~~i~~~----~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l  220 (429)
                      ....+...    .........+.++..+.+++.+||+.||.+|||+.++.
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~  299 (304)
T cd05096         250 VIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIH  299 (304)
T ss_pred             HHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCCchhCcCHHHHH
Confidence            55443221    11111122345789999999999999999999999985

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.97  E-value=4.7e-30  Score=237.72  Aligned_cols=178  Identities=20%  Similarity=0.263  Sum_probs=148.4

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.+|+|.+++.+..+..+++..+..++.|++.||.|||++|++|+||+|+||+++   .++.+||+|||.+.
T Consensus        76 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~---~~~~~kl~d~g~~~  152 (261)
T cd05148          76 PVYIITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVG---EDLVCKVADFGLAR  152 (261)
T ss_pred             CeEEEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEc---CCceEEEccccchh
Confidence            357899999999999999776667799999999999999999999999999999999999998   57889999999987


Q ss_pred             eccCCCcc-cccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          118 FIKPGKKF-QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       118 ~~~~~~~~-~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      ........ ....++..|+|||.+.+ .++.++|+||+|+++|+|++ |+.||.+.+..+....+.....   .+....+
T Consensus       153 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~  229 (261)
T cd05148         153 LIKEDVYLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYR---MPCPAKC  229 (261)
T ss_pred             hcCCccccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCc---CCCCCCC
Confidence            66433221 22334667999998864 45889999999999999998 8999988877777776664422   2223467


Q ss_pred             CHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ++.+.+++.+||+.||.+|||+.++++
T Consensus       230 ~~~~~~~i~~~l~~~p~~Rpt~~~l~~  256 (261)
T cd05148         230 PQEIYKIMLECWAAEPEDRPSFKALRE  256 (261)
T ss_pred             CHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            899999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.97  E-value=4.1e-30  Score=241.20  Aligned_cols=179  Identities=18%  Similarity=0.265  Sum_probs=145.4

Q ss_pred             cceeEeeecCCCChHHHHHhhc---------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeec
Q 014171           38 RKLRRIRLCEGGELLDRILAKK---------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA  102 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~---------------~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~  102 (429)
                      ..|+||||+.+|+|.+++....               ...+++..+..++.|++.||.|||++|++||||||+||+++  
T Consensus        81 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~--  158 (283)
T cd05090          81 PVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIG--  158 (283)
T ss_pred             ceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEc--
Confidence            4578999999999999985432               23578999999999999999999999999999999999998  


Q ss_pred             CCCCCEEEeecccceeccCCC---cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHH
Q 014171          103 KEDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFK  177 (429)
Q Consensus       103 ~~~~~~kL~Dfg~a~~~~~~~---~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~  177 (429)
                       .++.+||+|||++.......   ......++..|+|||.+.+ .++.++|+||+||++|+|++ |..||.+........
T Consensus       159 -~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~  237 (283)
T cd05090         159 -EQLHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIE  237 (283)
T ss_pred             -CCCcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHH
Confidence             47789999999997654322   1223345678999998864 46889999999999999998 999998877666655


Q ss_pred             HHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          178 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       178 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      .+......   +.+..+++.+++++.+||+.||.+||++.+++++
T Consensus       238 ~~~~~~~~---~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~  279 (283)
T cd05090         238 MVRKRQLL---PCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTR  279 (283)
T ss_pred             HHHcCCcC---CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            55543321   2334678999999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.97  E-value=6.8e-31  Score=243.35  Aligned_cols=196  Identities=23%  Similarity=0.370  Sum_probs=151.6

Q ss_pred             ccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 014171            8 DTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGL   87 (429)
Q Consensus         8 ~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i   87 (429)
                      .++|+|++++.+++..            ....++|+|||++|+|.+++.......+++..+..++.||+.||.|||++++
T Consensus        57 ~l~h~ni~~~~g~~~~------------~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~i  124 (259)
T PF07714_consen   57 KLRHPNIVKLYGFCIE------------NEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNI  124 (259)
T ss_dssp             THSBTTBE-EEEEEES------------SSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             cccccccccccccccc------------cccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            4566666666665552            1124579999999999999987756789999999999999999999999999


Q ss_pred             eecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc---ccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhh-
Q 014171           88 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-  162 (429)
Q Consensus        88 ~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~-  162 (429)
                      +|++|+++||+++   .++.+||+|||++........   .....+...|+|||.+... ++.++||||||+++|++++ 
T Consensus       125 iH~~l~~~nill~---~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~  201 (259)
T PF07714_consen  125 IHGNLSPSNILLD---SNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTL  201 (259)
T ss_dssp             EEST-SGGGEEEE---TTTEEEEESTTTGEETTTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTT
T ss_pred             ccccccccccccc---cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999999999999   578999999999987632222   1233456789999998654 5889999999999999999 


Q ss_pred             CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       163 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      |+.||.+.........+..+... +  ....++..+.++|.+||..+|.+|||+.++++
T Consensus       202 ~~~p~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~  257 (259)
T PF07714_consen  202 GKFPFSDYDNEEIIEKLKQGQRL-P--IPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQ  257 (259)
T ss_dssp             SSGTTTTSCHHHHHHHHHTTEET-T--SBTTSBHHHHHHHHHHT-SSGGGS--HHHHHH
T ss_pred             ccccccccccccccccccccccc-e--eccchhHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence            78999888887777777554432 1  22457999999999999999999999999874

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.97  E-value=2.4e-31  Score=256.77  Aligned_cols=207  Identities=22%  Similarity=0.276  Sum_probs=166.6

Q ss_pred             eeeecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHH
Q 014171            3 KILIGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC   82 (429)
Q Consensus         3 k~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~l   82 (429)
                      +.++.++|..+.++|+|++..++      ..++..+.|+|||+|.||+|.++|.+.+ +.++..+...++.+.+.||+||
T Consensus       206 ~e~m~EArvMr~l~H~NVVr~yG------Va~~~~Pl~ivmEl~~gGsL~~~L~k~~-~~v~~~ek~~~~~~AA~Gl~YL  278 (474)
T KOG0194|consen  206 KEFMKEARVMRQLNHPNVVRFYG------VAVLEEPLMLVMELCNGGSLDDYLKKNK-KSLPTLEKLRFCYDAARGLEYL  278 (474)
T ss_pred             HHHHHHHHHHHhCCCCCEEEEEE------EEcCCCccEEEEEecCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHhHHHHH
Confidence            44555666666666666666654      2333445568999999999999997764 3699999999999999999999


Q ss_pred             HHCCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCccc-ccccCCccccccccc-CCCCCCcchHHHHHHHHHH
Q 014171           83 HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ-DIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYIL  160 (429)
Q Consensus        83 H~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~-~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l  160 (429)
                      |+++++||||-..|+|++   .++.+||+|||+++......... ...-...|+|||.+. +-++.++||||+||++||+
T Consensus       279 h~k~~IHRDIAARNcL~~---~~~~vKISDFGLs~~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Ei  355 (474)
T KOG0194|consen  279 HSKNCIHRDIAARNCLYS---KKGVVKISDFGLSRAGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEI  355 (474)
T ss_pred             HHCCCcchhHhHHHheec---CCCeEEeCccccccCCcceeeccccccCcceecChhhhccCccccccchhheeeeEEee
Confidence            999999999999999999   46778999999987654222222 112356899999997 4579999999999999999


Q ss_pred             hh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          161 LC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       161 ~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ++ |..||.+....+....+.......+.+  +..+..+..++.+||..+|.+||++.++.+
T Consensus       356 f~~g~~Py~g~~~~~v~~kI~~~~~r~~~~--~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~  415 (474)
T KOG0194|consen  356 FENGAEPYPGMKNYEVKAKIVKNGYRMPIP--SKTPKELAKVMKQCWKKDPEDRPTMSTIKK  415 (474)
T ss_pred             eccCCCCCCCCCHHHHHHHHHhcCccCCCC--CCCHHHHHHHHHHhccCChhhccCHHHHHH
Confidence            98 899999999999999997766554443  367888999999999999999999988763

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.97  E-value=3.7e-30  Score=242.48  Aligned_cols=183  Identities=26%  Similarity=0.458  Sum_probs=140.8

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+||||+. |+|.+++.+.. ..+++..+..++.|++.||.|||++||+||||||+||+++   .++.++|+|||.+.
T Consensus        77 ~~~lv~e~~~-~~L~~~~~~~~-~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~~  151 (291)
T cd07844          77 TLTLVFEYLD-TDLKQYMDDCG-GGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLIS---ERGELKLADFGLAR  151 (291)
T ss_pred             eEEEEEecCC-CCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEc---CCCCEEECcccccc
Confidence            3578999998 59998886543 4789999999999999999999999999999999999998   47889999999987


Q ss_pred             eccCCC-cccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCCh-hHHHHHHHhcCCC--------
Q 014171          118 FIKPGK-KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLRNKPD--------  185 (429)
Q Consensus       118 ~~~~~~-~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~i~~~~~~--------  185 (429)
                      ...... ......++..|+|||.+.+  .++.++|+||+|+++|+|++|+.||.+... ......+......        
T Consensus       152 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (291)
T cd07844         152 AKSVPSKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPG  231 (291)
T ss_pred             ccCCCCccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhh
Confidence            543221 1223356788999998854  357899999999999999999999976552 2222222110000        


Q ss_pred             -----------CC-------CCCCCCCC--HHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          186 -----------FR-------RKPWPSIS--NSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       186 -----------~~-------~~~~~~~~--~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                                 ..       ....+.++  .++.+++.+||+.+|.+|||+.++++||||
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~~~~f  291 (291)
T cd07844         232 VSSNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMKHPYF  291 (291)
T ss_pred             hhhccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhcCCCC
Confidence                       00       00112334  788999999999999999999999999998

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.97  E-value=3.6e-30  Score=243.40  Aligned_cols=179  Identities=21%  Similarity=0.227  Sum_probs=144.3

Q ss_pred             cceeEeeecCCCChHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecC
Q 014171           38 RKLRRIRLCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK  103 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~  103 (429)
                      ..|+|+||+.+|+|.+++....              ...+++..+..++.|++.||+|||++||+||||||+||+++   
T Consensus        77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~---  153 (297)
T cd05089          77 YLYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVG---  153 (297)
T ss_pred             cceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEEC---
Confidence            3578999999999999996542              13588999999999999999999999999999999999998   


Q ss_pred             CCCCEEEeecccceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHh
Q 014171          104 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR  181 (429)
Q Consensus       104 ~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~  181 (429)
                      .++.+||+|||++..............+..|+|||.+.+ .++.++||||+||++|+|++ |..||.+.........+..
T Consensus       154 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~  233 (297)
T cd05089         154 ENLASKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQ  233 (297)
T ss_pred             CCCeEEECCcCCCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhc
Confidence            477899999999864322211112223457999998864 45889999999999999997 9999988887777766654


Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          182 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      ...   ......++..+++|+.+||+.+|.+|||++++++.
T Consensus       234 ~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~  271 (297)
T cd05089         234 GYR---MEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQ  271 (297)
T ss_pred             CCC---CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            421   12224578999999999999999999999998643

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.97  E-value=3.1e-30  Score=242.04  Aligned_cols=184  Identities=26%  Similarity=0.477  Sum_probs=146.4

Q ss_pred             cceeEeeecCCCChHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           38 RKLRRIRLCEGGELLDRILAKK-DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ..++||||+. |+|.+++.... ...+++..+..++.|++.||.|||+.|++||||+|+||+++   .++.++|+|||.+
T Consensus        72 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~---~~~~~~l~d~g~~  147 (284)
T cd07836          72 KLMLVFEYMD-KDLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLIN---KRGELKLADFGLA  147 (284)
T ss_pred             cEEEEEecCC-ccHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEC---CCCcEEEeecchh
Confidence            3578999998 58888876542 24689999999999999999999999999999999999998   5788999999998


Q ss_pred             eeccCCC-cccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCC---------
Q 014171          117 DFIKPGK-KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP---------  184 (429)
Q Consensus       117 ~~~~~~~-~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~---------  184 (429)
                      ....... ......++..|+|||.+.+  .++.++|+||+||++|+|++|+.||.+.+..+....+.....         
T Consensus       148 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (284)
T cd07836         148 RAFGIPVNTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPG  227 (284)
T ss_pred             hhhcCCccccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHH
Confidence            7554322 2234467889999998854  347899999999999999999999988776655544432210         


Q ss_pred             -----CCCC-----------CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          185 -----DFRR-----------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       185 -----~~~~-----------~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                           .+..           ...+.++..++++|.+||+.||.+||++.++++||||
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~~~~f  284 (284)
T cd07836         228 ISQLPEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQHPWF  284 (284)
T ss_pred             HhcCchhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhcCCCC
Confidence                 0000           0113457889999999999999999999999999998

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.97  E-value=4.7e-30  Score=243.15  Aligned_cols=179  Identities=24%  Similarity=0.295  Sum_probs=145.3

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+||||+.+|+|.+++.......+++.++..++.|++.||.|||++||+|+||||+||+++   .++.++|+|||++.
T Consensus       113 ~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~~l~dfg~~~  189 (302)
T cd05055         113 PILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLT---HGKIVKICDFGLAR  189 (302)
T ss_pred             ceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEc---CCCeEEECCCcccc
Confidence            357899999999999999765545589999999999999999999999999999999999998   57789999999987


Q ss_pred             eccCCCc---ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCC
Q 014171          118 FIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWP  192 (429)
Q Consensus       118 ~~~~~~~---~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  192 (429)
                      .......   .....++..|+|||.+.+ .++.++||||+||++|+|++ |..||.+.................  ....
T Consensus       190 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~  267 (302)
T cd05055         190 DIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDSKFYKLIKEGYRM--AQPE  267 (302)
T ss_pred             cccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchHHHHHHHHcCCcC--CCCC
Confidence            6543221   122345678999998764 45889999999999999998 999998776655554444333222  2234


Q ss_pred             CCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          193 SISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       193 ~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ..+..+.+++.+||+.+|.+|||+.++++
T Consensus       268 ~~~~~~~~li~~cl~~~p~~Rpt~~ell~  296 (302)
T cd05055         268 HAPAEIYDIMKTCWDADPLKRPTFKQIVQ  296 (302)
T ss_pred             CCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            57899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.97  E-value=2.2e-30  Score=245.61  Aligned_cols=179  Identities=22%  Similarity=0.266  Sum_probs=143.5

Q ss_pred             cceeEeeecCCCChHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecC
Q 014171           38 RKLRRIRLCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK  103 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~  103 (429)
                      ..|+||||+++|+|.+++....              ...+++..+..++.|++.||+|||++|++||||||+||+++   
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~---  158 (303)
T cd05088          82 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---  158 (303)
T ss_pred             CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEec---
Confidence            3578999999999999986542              23589999999999999999999999999999999999998   


Q ss_pred             CCCCEEEeecccceeccCCCcccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHh
Q 014171          104 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR  181 (429)
Q Consensus       104 ~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~  181 (429)
                      .++.++|+|||++.............++..|+|||.+.+. ++.++||||+||++|+|+| |..||.+.+..+....+..
T Consensus       159 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~  238 (303)
T cd05088         159 ENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ  238 (303)
T ss_pred             CCCcEEeCccccCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHhc
Confidence            4788999999998643222111222345679999988643 5889999999999999998 9999988777666655543


Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          182 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      ..   ....+..++.++.+++.+||+.+|.+||++++++++
T Consensus       239 ~~---~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~  276 (303)
T cd05088         239 GY---RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  276 (303)
T ss_pred             CC---cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            31   111223478899999999999999999999999865

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.97  E-value=4.5e-30  Score=240.19  Aligned_cols=179  Identities=19%  Similarity=0.269  Sum_probs=144.5

Q ss_pred             cceeEeeecCCCChHHHHHhhcC--------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEE
Q 014171           38 RKLRRIRLCEGGELLDRILAKKD--------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK  109 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~--------~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~k  109 (429)
                      ..++||||+.+|+|.+++.+.+.        ..+++..+..++.|++.||.|||+.|++|+||||+||+++   .++.++
T Consensus        83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~---~~~~~~  159 (277)
T cd05062          83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVK  159 (277)
T ss_pred             CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEc---CCCCEE
Confidence            35689999999999999865421        2467888999999999999999999999999999999999   478899


Q ss_pred             EeecccceeccCCCcc---cccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCC
Q 014171          110 ATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKP  184 (429)
Q Consensus       110 L~Dfg~a~~~~~~~~~---~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~  184 (429)
                      |+|||++.........   ....+++.|+|||.+.+ .++.++|+||+||++|+|++ |..||.+.+.......+.....
T Consensus       160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~  239 (277)
T cd05062         160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVMEGGL  239 (277)
T ss_pred             ECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCc
Confidence            9999998755432221   12244678999999864 45889999999999999999 7899988877776666655432


Q ss_pred             CCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          185 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       185 ~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      ..   ....++..+++++.+||+.+|.+|||+.+++++
T Consensus       240 ~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  274 (277)
T cd05062         240 LD---KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  274 (277)
T ss_pred             CC---CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            21   123578899999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.97  E-value=6.5e-30  Score=238.25  Aligned_cols=178  Identities=19%  Similarity=0.272  Sum_probs=145.8

Q ss_pred             ceeEeeecCCCChHHHHHhhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecc
Q 014171           39 KLRRIRLCEGGELLDRILAKK----DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG  114 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~----~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg  114 (429)
                      .++|+||+.+|+|..++...+    ...+++..+..++.|++.||.|||++|++||||||+||+++   .++.+||+|||
T Consensus        82 ~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~dfg  158 (273)
T cd05035          82 PMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLR---EDMTVCVADFG  158 (273)
T ss_pred             cEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEEC---CCCeEEECCcc
Confidence            468999999999999885542    24689999999999999999999999999999999999998   47789999999


Q ss_pred             cceeccCCCcc---cccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCC
Q 014171          115 LSDFIKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRK  189 (429)
Q Consensus       115 ~a~~~~~~~~~---~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~  189 (429)
                      .++........   ....++..|+|||.+.+ .++.++||||+||++|+|++ |..||.+.........+..+...   .
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~---~  235 (273)
T cd05035         159 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHGNRL---K  235 (273)
T ss_pred             ceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---C
Confidence            99866433221   11234568999998864 45889999999999999999 89999887777777666654322   1


Q ss_pred             CCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          190 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       190 ~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      ....++..+.+++.+||+.||.+|||+.+++++
T Consensus       236 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~  268 (273)
T cd05035         236 QPEDCLDELYDLMYSCWRADPKDRPTFTKLREV  268 (273)
T ss_pred             CCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            224678999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.97  E-value=5e-30  Score=239.89  Aligned_cols=183  Identities=26%  Similarity=0.429  Sum_probs=151.4

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.+|+|.+++..   ..+++..+..++.|++.|+.|||++|++|+||+|+||+++   .++.++|+|||++.
T Consensus        76 ~~~lv~e~~~~~~l~~~i~~---~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~---~~~~~~l~dfg~~~  149 (277)
T cd06641          76 KLWIIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS---EHGEVKLADFGVAG  149 (277)
T ss_pred             eEEEEEEeCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEEC---CCCCEEEeecccce
Confidence            35789999999999988743   4689999999999999999999999999999999999998   57889999999987


Q ss_pred             eccCCCc-ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~~~~~-~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      ....... .....++..|+|||.+.+ ..+.++|+||+||++|+|++|..||...........+.....   ......++
T Consensus       150 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~  226 (277)
T cd06641         150 QLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPMKVLFLIPKNNP---PTLEGNYS  226 (277)
T ss_pred             ecccchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHHHhcCCC---CCCCcccC
Confidence            6643322 233467889999998864 457889999999999999999999977666555554433322   12224578


Q ss_pred             HHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          196 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      .++.+++.+||+.+|.+||++.++++||||.+..
T Consensus       227 ~~~~~~i~~~l~~~p~~Rp~~~~~l~~~~~~~~~  260 (277)
T cd06641         227 KPLKEFVEACLNKEPSFRPTAKELLKHKFIVRFA  260 (277)
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHHhCHHHhhhh
Confidence            9999999999999999999999999999998853

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]

Probab=99.97  E-value=1.6e-30  Score=213.68  Aligned_cols=207  Identities=26%  Similarity=0.463  Sum_probs=168.8

Q ss_pred             eecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 014171            5 LIGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL   84 (429)
Q Consensus         5 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~   84 (429)
                      ++++++|.|++++...+.+      +..+.      +|+|||. .+|..+..+. ++.++.+.++.++.|+++||.+||+
T Consensus        54 llkelkhknivrl~dvlhs------dkklt------lvfe~cd-qdlkkyfdsl-ng~~d~~~~rsfmlqllrgl~fchs  119 (292)
T KOG0662|consen   54 LLKELKHKNIVRLHDVLHS------DKKLT------LVFEFCD-QDLKKYFDSL-NGDLDPEIVRSFMLQLLRGLGFCHS  119 (292)
T ss_pred             HHHHhhhcceeehhhhhcc------CceeE------EeHHHhh-HHHHHHHHhc-CCcCCHHHHHHHHHHHHhhhhhhhh
Confidence            3567788888887776654      22333      5899997 5788777554 5889999999999999999999999


Q ss_pred             CCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc-ccccccCCcccccccccC--CCCCCcchHHHHHHHHHHh
Q 014171           85 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILL  161 (429)
Q Consensus        85 ~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~  161 (429)
                      +++.|||+||.|.+++   .++.+||+|||+|+.+..+-. .+..+-|.+|++|.++-+  -|+...|+||.||++.|+.
T Consensus       120 hnvlhrdlkpqnllin---~ngelkladfglarafgipvrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaela  196 (292)
T KOG0662|consen  120 HNVLHRDLKPQNLLIN---RNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELA  196 (292)
T ss_pred             hhhhhccCCcceEEec---cCCcEEecccchhhhcCCceEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHh
Confidence            9999999999999999   589999999999998765543 345567899999999854  4688999999999999998


Q ss_pred             h-CCCCCCCCChhHHHHHHHhcCCCCCCCCCC-------------------------CCCHHHHHHHHHhccCCccCcCC
Q 014171          162 C-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWP-------------------------SISNSAKDFVKKLLVKDPRARLT  215 (429)
Q Consensus       162 ~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~-------------------------~~~~~~~~li~~~l~~dp~~R~s  215 (429)
                      . |++.|.+.+....+.+|...........||                         .++..-+++++++|.-+|.+|++
T Consensus       197 nagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~lpdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qris  276 (292)
T KOG0662|consen  197 NAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKLPDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRIS  276 (292)
T ss_pred             hcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccCCCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccC
Confidence            7 778889998888888877644333333333                         23456789999999999999999


Q ss_pred             HHHHhCCCccccC
Q 014171          216 AAQALSHPWVREG  228 (429)
Q Consensus       216 ~~e~l~h~~~~~~  228 (429)
                      ++++++||||...
T Consensus       277 aeaalqhpyf~d~  289 (292)
T KOG0662|consen  277 AEAALQHPYFSDF  289 (292)
T ss_pred             HHHHhcCcccccc
Confidence            9999999999865

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.97  E-value=7e-30  Score=235.55  Aligned_cols=181  Identities=28%  Similarity=0.442  Sum_probs=149.2

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..++|+||+.+++|.+++.+.  ..+++..+..++.|++.||.|||+.|++|+||+|+||+++   .++.++|+|||.+.
T Consensus        75 ~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~---~~~~~~l~d~~~~~  149 (260)
T cd06606          75 TLNIFLEYVSGGSLSSLLKKF--GKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVD---SDGVVKLADFGCAK  149 (260)
T ss_pred             eEEEEEEecCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEc---CCCCEEEcccccEE
Confidence            456899999999999998655  4899999999999999999999999999999999999999   47899999999988


Q ss_pred             eccCCCc---ccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCCCCCCCChh-HHHHHHHhcCCCCCCCCCC
Q 014171          118 FIKPGKK---FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLRNKPDFRRKPWP  192 (429)
Q Consensus       118 ~~~~~~~---~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~  192 (429)
                      .......   .....++..|.|||.+.+. .+.++|+||+|+++++|++|..||...... .....+....  .......
T Consensus       150 ~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~  227 (260)
T cd06606         150 RLGDIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGNPMAALYKIGSSG--EPPEIPE  227 (260)
T ss_pred             ecccccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHhccccC--CCcCCCc
Confidence            7765543   3455788899999998754 688999999999999999999999776522 2222222111  1122234


Q ss_pred             CCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          193 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       193 ~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                      .++..++++|.+||..+|.+||++.++++||||
T Consensus       228 ~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~~~~~  260 (260)
T cd06606         228 HLSEEAKDFLRKCLRRDPKKRPTADELLQHPFL  260 (260)
T ss_pred             ccCHHHHHHHHHhCcCChhhCCCHHHHhhCCCC
Confidence            568999999999999999999999999999997

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.97  E-value=7.2e-30  Score=240.24  Aligned_cols=185  Identities=21%  Similarity=0.284  Sum_probs=148.1

Q ss_pred             cceeEeeecCCCChHHHHHhhcC--------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEE
Q 014171           38 RKLRRIRLCEGGELLDRILAKKD--------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK  109 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~--------~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~k  109 (429)
                      ..|+|||||.+|+|.+++.+...        ..++...+..++.|++.||.|||++||+||||||+||+++   .++.++
T Consensus        83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~---~~~~~~  159 (288)
T cd05061          83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVA---HDFTVK  159 (288)
T ss_pred             CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEc---CCCcEE
Confidence            45789999999999999965321        2346778899999999999999999999999999999998   478899


Q ss_pred             EeecccceeccCCCcc---cccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCC
Q 014171          110 ATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKP  184 (429)
Q Consensus       110 L~Dfg~a~~~~~~~~~---~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~  184 (429)
                      |+|||+++........   ....++..|+|||.+.+ .++.++|+||+||++|+|++ |..||.+....+....+..+..
T Consensus       160 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~~  239 (288)
T cd05061         160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVMDGGY  239 (288)
T ss_pred             ECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC
Confidence            9999998755332211   12234667999998864 55889999999999999998 7889988777776666554432


Q ss_pred             CCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC------CCccccC
Q 014171          185 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS------HPWVREG  228 (429)
Q Consensus       185 ~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~------h~~~~~~  228 (429)
                      ..   .....+..+++++.+||+.+|.+|||+.++++      ||||+..
T Consensus       240 ~~---~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~~~~~~~~  286 (288)
T cd05061         240 LD---QPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEV  286 (288)
T ss_pred             CC---CCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhcCCCCCCC
Confidence            11   12346789999999999999999999999986      8998764

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.97  E-value=5.3e-30  Score=240.81  Aligned_cols=189  Identities=31%  Similarity=0.507  Sum_probs=153.8

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|+||+.|++|.+++.... ..+++..+..++.|++.||.|||+.|++|+||+|+||+++   .++.++|+|||.+
T Consensus        88 ~~~~lv~e~~~~~~L~~~l~~~~-~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~---~~~~~~l~d~~~~  163 (286)
T cd06614          88 DELWVVMEYMDGGSLTDIITQNF-VRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLS---KDGSVKLADFGFA  163 (286)
T ss_pred             CEEEEEEeccCCCcHHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEc---CCCCEEECccchh
Confidence            44678999999999999997653 4799999999999999999999999999999999999998   4788999999987


Q ss_pred             eeccCCC-cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~~~~~~-~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      ....... ......++..|+|||.+.+ .++.++|+||+||++|+|++|+.||...........+...... .......+
T Consensus       164 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~  242 (286)
T cd06614         164 AQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPLRALFLITTKGIP-PLKNPEKW  242 (286)
T ss_pred             hhhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCC-CCcchhhC
Confidence            6554322 2233457889999998864 4588999999999999999999999876665554444433221 11122347


Q ss_pred             CHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                      +..++++|.+||+.+|.+||++.++++|+||+....
T Consensus       243 ~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~  278 (286)
T cd06614         243 SPEFKDFLNKCLVKDPEKRPSAEELLQHPFLKKACP  278 (286)
T ss_pred             CHHHHHHHHHHhccChhhCcCHHHHhhChHhhccCc
Confidence            889999999999999999999999999999998543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.97  E-value=4.4e-30  Score=259.07  Aligned_cols=188  Identities=20%  Similarity=0.224  Sum_probs=139.6

Q ss_pred             cceeEeeecCCCChHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecc
Q 014171           38 RKLRRIRLCEGGELLDRILAKK---DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG  114 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~---~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg  114 (429)
                      ..|+|++++. ++|..++....   ........++.++.||+.||.|||++||+||||||+|||++   .++.+||+|||
T Consensus       237 ~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~---~~~~vkL~DFG  312 (501)
T PHA03210        237 NTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLN---CDGKIVLGDFG  312 (501)
T ss_pred             eeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCCEEEEeCC
Confidence            3467899985 67888775431   12344677889999999999999999999999999999998   57889999999


Q ss_pred             cceeccCCCc--ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCC---hhHHHHHHHhcCC----
Q 014171          115 LSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKT---EDGIFKEVLRNKP----  184 (429)
Q Consensus       115 ~a~~~~~~~~--~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~---~~~~~~~i~~~~~----  184 (429)
                      ++..+.....  .....|++.|+|||++.+ .++.++||||+||++|+|++|..++.+..   ....+..+.....    
T Consensus       313 la~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  392 (501)
T PHA03210        313 TAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLSVCDE  392 (501)
T ss_pred             CceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcccChh
Confidence            9987654322  234579999999999865 46889999999999999999886544322   2222222221110    


Q ss_pred             CCCC------------------CC------CCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          185 DFRR------------------KP------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       185 ~~~~------------------~~------~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      .++.                  ..      ...++.++.++|.+||+.||.+|||+.|+|+||||+...
T Consensus       393 ~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~hp~f~~~~  461 (501)
T PHA03210        393 EFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLALPLFSAEE  461 (501)
T ss_pred             hcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhChhhhcCC
Confidence            0000                  00      012456788899999999999999999999999998753

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.97  E-value=1.2e-29  Score=241.64  Aligned_cols=182  Identities=26%  Similarity=0.425  Sum_probs=149.1

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||. |+|.+++... ...+++.++..++.|++.||.|||++|++|+||+|+||+++   .++.++|+|||.+.
T Consensus        95 ~~~lv~e~~~-~~l~~~l~~~-~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~---~~~~~kL~dfg~~~  169 (313)
T cd06633          95 TAWLVMEYCL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLT---EPGQVKLADFGSAS  169 (313)
T ss_pred             EEEEEEecCC-CCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEEC---CCCCEEEeecCCCc
Confidence            4578999996 6788777543 35789999999999999999999999999999999999998   47889999999886


Q ss_pred             eccCCCcccccccCCccccccccc----CCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~----~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      ....   .....|+..|+|||.+.    +.++.++|+||+||++|+|++|..||...........+.....  +....+.
T Consensus       170 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~~  244 (313)
T cd06633         170 KSSP---ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNDS--PTLQSNE  244 (313)
T ss_pred             ccCC---CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCC--CCCCccc
Confidence            4322   23457888999999874    3457889999999999999999999988766555555544332  2222235


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      ++..+++++.+||+.+|.+||++.++++||||+...
T Consensus       245 ~~~~l~~li~~~l~~~P~~Rp~~~~~l~~~~~~~~~  280 (313)
T cd06633         245 WTDSFRGFVDYCLQKIPQERPASAELLRHDFVRRDR  280 (313)
T ss_pred             cCHHHHHHHHHHccCChhhCcCHHHHhcCcccCCCc
Confidence            678899999999999999999999999999999754

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.97  E-value=4.5e-30  Score=241.83  Aligned_cols=183  Identities=29%  Similarity=0.547  Sum_probs=148.7

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|+||+++|+|.+++...  ..+++..+..++.|++.||.|||+.|++||||+|+||+++   .++.++|+|||++.
T Consensus        79 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~~  153 (290)
T cd05613          79 KLHLILDYINGGELFTHLSQR--ERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLD---SNGHVVLTDFGLSK  153 (290)
T ss_pred             eEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEC---CCCCEEEeeCccce
Confidence            357899999999999998654  5789999999999999999999999999999999999998   47899999999987


Q ss_pred             eccCCC--cccccccCCcccccccccC---CCCCCcchHHHHHHHHHHhhCCCCCCCCChh----HHHHHHHhcCCCCCC
Q 014171          118 FIKPGK--KFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTED----GIFKEVLRNKPDFRR  188 (429)
Q Consensus       118 ~~~~~~--~~~~~~g~~~y~aPE~~~~---~~~~~~DiwslG~il~~l~~g~~pf~~~~~~----~~~~~i~~~~~~~~~  188 (429)
                      ......  ......|+..|+|||.+..   ..+.++|+||+|+++|+|++|..||......    .....+......+  
T Consensus       154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~--  231 (290)
T cd05613         154 EFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPY--  231 (290)
T ss_pred             ecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCccccHHHHHHHhhccCCCC--
Confidence            654322  2234568889999999864   3467899999999999999999999644322    2233333332222  


Q ss_pred             CCCCCCCHHHHHHHHHhccCCccCcC-----CHHHHhCCCccccCC
Q 014171          189 KPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREGG  229 (429)
Q Consensus       189 ~~~~~~~~~~~~li~~~l~~dp~~R~-----s~~e~l~h~~~~~~~  229 (429)
                        ...++..+.+++.+||+.+|.+||     ++++++.||||+...
T Consensus       232 --~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~~~~~~~~~  275 (290)
T cd05613         232 --PQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKKHPFFQKIN  275 (290)
T ss_pred             --CccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHcCcccccCC
Confidence              245789999999999999999997     899999999998764

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.97  E-value=1.1e-29  Score=237.98  Aligned_cols=176  Identities=20%  Similarity=0.269  Sum_probs=143.5

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .++|+||+.+|+|.+++... .+.+++..+..++.||+.||.|||++|++||||||+||+++   .++.+||+|||.++.
T Consensus        83 ~~~i~e~~~~gsL~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~---~~~~~kl~Dfg~~~~  158 (279)
T cd05111          83 LQLVTQLSPLGSLLDHVRQH-RDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLK---SDSIVQIADFGVADL  158 (279)
T ss_pred             cEEEEEeCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEc---CCCcEEEcCCcccee
Confidence            46799999999999998654 35789999999999999999999999999999999999998   578899999999986


Q ss_pred             ccCCCc---ccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          119 IKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       119 ~~~~~~---~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      ......   .....++..|+|||.+. +.++.++|+||+||++|++++ |..||.+.........+..+... .  ....
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~-~--~~~~  235 (279)
T cd05111         159 LYPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPHEVPDLLEKGERL-A--QPQI  235 (279)
T ss_pred             ccCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCcC-C--CCCC
Confidence            543221   22345667899999886 456899999999999999998 99999887666554444333321 1  1234


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      .+.++.+++.+||..+|.+|||+.++++
T Consensus       236 ~~~~~~~li~~c~~~~p~~Rps~~el~~  263 (279)
T cd05111         236 CTIDVYMVMVKCWMIDENVRPTFKELAN  263 (279)
T ss_pred             CCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            6788999999999999999999999864

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.97  E-value=3.8e-30  Score=241.58  Aligned_cols=188  Identities=26%  Similarity=0.366  Sum_probs=149.4

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~-~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      ...|+|+||+++|+|.+++...  +.+++..+..++.+++.||.|||+ .|++||||+|+||+++   +++.++|+|||+
T Consensus        76 ~~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~---~~~~~~l~d~gl  150 (284)
T cd06620          76 NNICMCMEFMDCGSLDRIYKKG--GPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVN---SRGQIKLCDFGV  150 (284)
T ss_pred             CEEEEEEecCCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEEC---CCCcEEEccCCc
Confidence            3457899999999999888543  679999999999999999999997 6999999999999998   578899999998


Q ss_pred             ceeccCCCcccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhhCCCCCCCCChh-----------HHHHHHHhcC
Q 014171          116 SDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTED-----------GIFKEVLRNK  183 (429)
Q Consensus       116 a~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-----------~~~~~i~~~~  183 (429)
                      +....... .....|+..|+|||.+. +..+.++|+||+||++|++++|..||......           +....+....
T Consensus       151 ~~~~~~~~-~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (284)
T cd06620         151 SGELINSI-ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP  229 (284)
T ss_pred             ccchhhhc-cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc
Confidence            86543222 23457899999999875 45588999999999999999999999765442           2222333222


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCCC
Q 014171          184 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS  232 (429)
Q Consensus       184 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~~  232 (429)
                      ..  ......++..+.+|+.+||+.||.+|||++++++|+||.......
T Consensus       230 ~~--~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~~~~~~~~~  276 (284)
T cd06620         230 PP--RLPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPPFIQALRAS  276 (284)
T ss_pred             CC--CCCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcccccccccc
Confidence            11  111123678899999999999999999999999999997765443

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.97  E-value=5.2e-30  Score=240.56  Aligned_cols=184  Identities=29%  Similarity=0.475  Sum_probs=147.6

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|+||+. ++|.+++.+. ...+++..+..++.||+.||.|||+.|++|+||+|+||+++   .++.++|+|||.+
T Consensus        73 ~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~---~~~~~~l~d~g~~  147 (287)
T cd07840          73 GSIYMVFEYMD-HDLTGLLDSP-EVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILIN---NDGVLKLADFGLA  147 (287)
T ss_pred             CcEEEEecccc-ccHHHHHhcc-CCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEc---CCCCEEEccccce
Confidence            34678999997 5888887544 25799999999999999999999999999999999999999   5789999999998


Q ss_pred             eeccCCC--cccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCC-
Q 014171          117 DFIKPGK--KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW-  191 (429)
Q Consensus       117 ~~~~~~~--~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~-  191 (429)
                      .......  ......++..|+|||.+.+  .++.++||||+|+++|+|++|+.||...+.......+...........| 
T Consensus       148 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (287)
T cd07840         148 RPYTKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWP  227 (287)
T ss_pred             eeccCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhcc
Confidence            8765433  1234456788999998754  3588999999999999999999999887766655554432211111111 


Q ss_pred             -------------------------CC-CCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          192 -------------------------PS-ISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       192 -------------------------~~-~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                                               .. ++..+.+++.+||..+|.+||++.++++||||
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~~~~  287 (287)
T cd07840         228 GVSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQHEYF  287 (287)
T ss_pred             ccccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhhCcCC
Confidence                                     12 27889999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.97  E-value=9.2e-30  Score=235.36  Aligned_cols=175  Identities=21%  Similarity=0.257  Sum_probs=144.2

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .++||||+.+|+|.+++...  ..+++..+..++.|++.||.|||+.|++|+||||+||+++   .++.++|+|||.+..
T Consensus        70 ~~~v~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~---~~~~~kl~df~~~~~  144 (257)
T cd05060          70 LMLVMELAPLGPLLKYLKKR--REIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLV---NRHQAKISDFGMSRA  144 (257)
T ss_pred             eEEEEEeCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEc---CCCcEEeccccccce
Confidence            46899999999999999655  4799999999999999999999999999999999999998   578899999999886


Q ss_pred             ccCCCcc----cccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCC
Q 014171          119 IKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWP  192 (429)
Q Consensus       119 ~~~~~~~----~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  192 (429)
                      .......    ....++..|+|||.+.+ .++.++|+||+||++|+|++ |..||...+.......+......   ....
T Consensus       145 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~  221 (257)
T cd05060         145 LGAGSDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKGAEVIAMLESGERL---PRPE  221 (257)
T ss_pred             eecCCcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCcC---CCCC
Confidence            6433321    11123457999998864 45889999999999999998 99999877776666665544321   2234


Q ss_pred             CCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          193 SISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       193 ~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      .++..++++|.+||..+|.+||++.++++
T Consensus       222 ~~~~~l~~li~~cl~~~p~~Rp~~~~l~~  250 (257)
T cd05060         222 ECPQEIYSIMLSCWKYRPEDRPTFSELES  250 (257)
T ss_pred             CCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            67899999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.97  E-value=5.1e-30  Score=244.54  Aligned_cols=177  Identities=23%  Similarity=0.238  Sum_probs=143.5

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .++|+||+.+|+|.+++.... ..+++..+..++.||+.||+|||++||+||||||+||+++   .++.+||+|||++..
T Consensus        83 ~~~v~e~~~~g~l~~~l~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~---~~~~~kl~DfG~a~~  158 (316)
T cd05108          83 VQLITQLMPFGCLLDYVREHK-DNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVK---TPQHVKITDFGLAKL  158 (316)
T ss_pred             ceeeeecCCCCCHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEec---CCCcEEEcccccccc
Confidence            467999999999999986542 5689999999999999999999999999999999999998   477899999999987


Q ss_pred             ccCCCccc---ccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          119 IKPGKKFQ---DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       119 ~~~~~~~~---~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      ........   ...++..|+|||.+.+ .++.++||||+||++|+|++ |..||.+........ +.......+  ..+.
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~~~~~-~~~~~~~~~--~~~~  235 (316)
T cd05108         159 LGADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS-ILEKGERLP--QPPI  235 (316)
T ss_pred             ccCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHH-HHhCCCCCC--CCCC
Confidence            65433221   2233567999998864 56889999999999999997 999998776655443 333332222  2245


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      ++.++.+++.+||..+|.+||++.+++.+
T Consensus       236 ~~~~~~~li~~cl~~~p~~Rps~~~l~~~  264 (316)
T cd05108         236 CTIDVYMIMVKCWMIDADSRPKFRELIIE  264 (316)
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            78899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.97  E-value=5.4e-30  Score=238.77  Aligned_cols=177  Identities=22%  Similarity=0.259  Sum_probs=142.2

Q ss_pred             ceeEeeecCCCChHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCC
Q 014171           39 KLRRIRLCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE  104 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~  104 (429)
                      .|+||||+.+|+|.+++...+              ...+++.++..++.|++.||+|||++|++||||||+||+++   .
T Consensus        71 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~---~  147 (270)
T cd05047          71 LYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---E  147 (270)
T ss_pred             ceEEEEeCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEc---C
Confidence            478999999999999986542              13578999999999999999999999999999999999998   5


Q ss_pred             CCCEEEeecccceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhc
Q 014171          105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRN  182 (429)
Q Consensus       105 ~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~  182 (429)
                      ++.+||+|||++..............+..|+|||.+.. .++.++|+||+||++|+|++ |..||.+.+.......+...
T Consensus       148 ~~~~kl~dfgl~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~  227 (270)
T cd05047         148 NYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG  227 (270)
T ss_pred             CCeEEECCCCCccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhCC
Confidence            78899999999864322211122233567999998854 45889999999999999997 99999887776666655443


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          183 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ..   ......++.++.+++.+||+.+|.+|||+.++++
T Consensus       228 ~~---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (270)
T cd05047         228 YR---LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILV  263 (270)
T ss_pred             CC---CCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHH
Confidence            21   1122357889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.97  E-value=8.6e-30  Score=235.78  Aligned_cols=177  Identities=15%  Similarity=0.215  Sum_probs=138.4

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCC-----CCCEEEe
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE-----DSSLKAT  111 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~-----~~~~kL~  111 (429)
                      ...++|||||.+|+|.+++...+ ..+++..+..++.||+.||.|||++||+||||||+||+++..+.     ...++++
T Consensus        72 ~~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~  150 (258)
T cd05078          72 DESIMVQEYVKFGSLDTYLKKNK-NLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLS  150 (258)
T ss_pred             CCcEEEEecCCCCcHHHHHhcCC-CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEec
Confidence            34578999999999999986543 46899999999999999999999999999999999999985321     1237999


Q ss_pred             ecccceeccCCCcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCC-CCCCCCChhHHHHHHHhcCCCCCC
Q 014171          112 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGR-RPFWDKTEDGIFKEVLRNKPDFRR  188 (429)
Q Consensus       112 Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~-~pf~~~~~~~~~~~i~~~~~~~~~  188 (429)
                      |||.+......   ....++..|+|||.+.+  .++.++|+||+||++|+|++|. .||......... ........++ 
T Consensus       151 d~g~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~~~~-~~~~~~~~~~-  225 (258)
T cd05078         151 DPGISITVLPK---EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQKKL-QFYEDRHQLP-  225 (258)
T ss_pred             ccccccccCCc---hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHHHHH-HHHHccccCC-
Confidence            99988655332   23467889999999875  3588999999999999999985 555544443332 2333333222 


Q ss_pred             CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          189 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       189 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                         ...+.++.+++.+||+.+|.+|||++++++.
T Consensus       226 ---~~~~~~~~~li~~~l~~~p~~Rps~~~il~~  256 (258)
T cd05078         226 ---APKWTELANLINQCMDYEPDFRPSFRAIIRD  256 (258)
T ss_pred             ---CCCcHHHHHHHHHHhccChhhCCCHHHHHHh
Confidence               2356889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.97  E-value=6.5e-30  Score=246.55  Aligned_cols=183  Identities=31%  Similarity=0.482  Sum_probs=147.8

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .++|+||+ |++|.+++..   ..+++..+..++.||+.||.|||+.||+||||||+||+++   .++.++|+|||++..
T Consensus        95 ~~lv~e~~-~~~l~~~~~~---~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~---~~~~~kl~dfg~~~~  167 (343)
T cd07880          95 FYLVMPFM-GTDLGKLMKH---EKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVN---EDCELKILDFGLARQ  167 (343)
T ss_pred             EEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEeecccccc
Confidence            46899999 7888877743   4799999999999999999999999999999999999998   478899999999876


Q ss_pred             ccCCCcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCC-----------
Q 014171          119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD-----------  185 (429)
Q Consensus       119 ~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~-----------  185 (429)
                      ....  .....+++.|+|||.+.+  ..+.++|+||+||++|++++|..||.+.........+......           
T Consensus       168 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  245 (343)
T cd07880         168 TDSE--MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKEFVQKLQS  245 (343)
T ss_pred             cccC--ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHhhcc
Confidence            5432  233467889999998864  3578899999999999999999999877655444443322111           


Q ss_pred             ------------CCC----CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          186 ------------FRR----KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       186 ------------~~~----~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                                  ...    ..++.++.++.++|.+||+.||.+|||+.+++.||||+....
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~~~~~~~~~  306 (343)
T cd07880         246 EDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAHPYFEEFHD  306 (343)
T ss_pred             hhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcCccHhhhcC
Confidence                        000    112457888999999999999999999999999999987543

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.97  E-value=7e-30  Score=241.29  Aligned_cols=186  Identities=25%  Similarity=0.369  Sum_probs=147.4

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~-~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ..|+||||+. ++|...+... ...+++..+..++.|++.||.|||+ .||+||||+|+||+++   .++.++|+|||.+
T Consensus        88 ~~~~v~e~~~-~~l~~l~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~---~~~~~kL~dfg~~  162 (296)
T cd06618          88 DVFICMELMS-TCLDKLLKRI-QGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLD---ASGNVKLCDFGIS  162 (296)
T ss_pred             eEEEEeeccC-cCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEc---CCCCEEECccccc
Confidence            4578999985 5777766443 3589999999999999999999997 6999999999999998   5789999999998


Q ss_pred             eeccCCCcccccccCCcccccccccCC-----CCCCcchHHHHHHHHHHhhCCCCCCCCCh-hHHHHHHHhcCCCCCCCC
Q 014171          117 DFIKPGKKFQDIVGSAYYVAPEVLKRK-----SGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLRNKPDFRRKP  190 (429)
Q Consensus       117 ~~~~~~~~~~~~~g~~~y~aPE~~~~~-----~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~i~~~~~~~~~~~  190 (429)
                      .............++..|+|||.+.+.     .+.++|+||+|+++|+|++|+.||..... .+....+........ +.
T Consensus       163 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~-~~  241 (296)
T cd06618         163 GRLVDSKAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPPSL-PP  241 (296)
T ss_pred             hhccCCCcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCCCC-CC
Confidence            776544443444678899999998643     57889999999999999999999965432 333444443332111 11


Q ss_pred             CCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          191 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       191 ~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      ...++.++.+|+.+||..||.+||+++++++|+||....
T Consensus       242 ~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~~~~~~~  280 (296)
T cd06618         242 NEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHPFIRRYE  280 (296)
T ss_pred             CCCCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhccc
Confidence            124688999999999999999999999999999998754

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.97  E-value=7e-30  Score=236.97  Aligned_cols=176  Identities=19%  Similarity=0.194  Sum_probs=136.7

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCC----CCCEEEeec
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE----DSSLKATDF  113 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~----~~~~kL~Df  113 (429)
                      ..++|||||.+|+|..++... ...+++..+..++.||+.||.|||++||+||||||+||+++..+.    ...++++||
T Consensus        78 ~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~  156 (262)
T cd05077          78 ENIMVEEFVEFGPLDLFMHRK-SDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDP  156 (262)
T ss_pred             CCEEEEecccCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence            446899999999998876543 357999999999999999999999999999999999999984221    123899999


Q ss_pred             ccceeccCCCcccccccCCccccccccc--CCCCCCcchHHHHHHHHHHh-hCCCCCCCCChhHHHHHHHhcCCCCCCCC
Q 014171          114 GLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILL-CGRRPFWDKTEDGIFKEVLRNKPDFRRKP  190 (429)
Q Consensus       114 g~a~~~~~~~~~~~~~g~~~y~aPE~~~--~~~~~~~DiwslG~il~~l~-~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  190 (429)
                      |.+......   ....++..|+|||.+.  ..++.++||||+||++|+|+ +|..||......+.. .........    
T Consensus       157 g~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~-~~~~~~~~~----  228 (262)
T cd05077         157 GIPITVLSR---QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEKE-RFYEGQCML----  228 (262)
T ss_pred             CCCccccCc---ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHHH-HHHhcCccC----
Confidence            988654322   2346788899999885  34688999999999999997 588888665543332 222222221    


Q ss_pred             CCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          191 WPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       191 ~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      ....+.++.+||.+||+.||.+||++.+++++
T Consensus       229 ~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~  260 (262)
T cd05077         229 VTPSCKELADLMTHCMNYDPNQRPFFRAIMRD  260 (262)
T ss_pred             CCCChHHHHHHHHHHcCCChhhCcCHHHHHHh
Confidence            12346789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.97  E-value=1.8e-30  Score=249.05  Aligned_cols=185  Identities=29%  Similarity=0.481  Sum_probs=155.7

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+||+|+.||++..+|.+.  +-|+|..++.++.++.+|+++.|..|+|||||||+||||+   .+|+|||.|||++.-
T Consensus       704 LYFVMdYIPGGDmMSLLIrm--gIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILID---rdGHIKLTDFGLCTG  778 (1034)
T KOG0608|consen  704 LYFVMDYIPGGDMMSLLIRM--GIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILID---RDGHIKLTDFGLCTG  778 (1034)
T ss_pred             eEEEEeccCCccHHHHHHHh--ccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEc---cCCceeeeecccccc
Confidence            46899999999999999776  8999999999999999999999999999999999999999   589999999999753


Q ss_pred             cc---------CCCc----------------------------------ccccccCCccccccccc-CCCCCCcchHHHH
Q 014171          119 IK---------PGKK----------------------------------FQDIVGSAYYVAPEVLK-RKSGPESDVWSIG  154 (429)
Q Consensus       119 ~~---------~~~~----------------------------------~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG  154 (429)
                      +.         .+..                                  ....+||+.|+|||++. .++++.+|+||.|
T Consensus       779 fRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~g  858 (1034)
T KOG0608|consen  779 FRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVG  858 (1034)
T ss_pred             ceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhh
Confidence            21         0000                                  01357999999999986 4679999999999


Q ss_pred             HHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCC---HHHHhCCCccccCC
Q 014171          155 VITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT---AAQALSHPWVREGG  229 (429)
Q Consensus       155 ~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s---~~e~l~h~~~~~~~  229 (429)
                      ||||+|+.|++||...+..+...+++.....+..+....+|.++.++|.++.+ +++.|..   ++++..||||+...
T Consensus       859 vil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~~~~~~ls~e~~~li~kLc~-sad~RLGkng~d~vKaHpfFkgID  935 (1034)
T KOG0608|consen  859 VILYEMLVGQPPFLADTPGETQYKVINWRNFLHIPYQGNLSKEALDLIQKLCC-SADSRLGKNGADQVKAHPFFKGID  935 (1034)
T ss_pred             HHHHHHhhCCCCccCCCCCcceeeeeehhhccccccccccCHHHHHHHHHHhc-ChhhhhcccchhhhhcCccccccc
Confidence            99999999999999999888877776554444444456799999999998765 4888874   67899999999863

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.97  E-value=7.3e-30  Score=241.71  Aligned_cols=183  Identities=26%  Similarity=0.431  Sum_probs=145.9

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|+||+.+ ++...+... ...+++..+..++.||+.||.|||+.||+|+||+|+||+++   .++.+||+|||.+.
T Consensus        90 ~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~---~~~~~kl~dfg~~~  164 (302)
T cd07864          90 AFYLVFEYMDH-DLMGLLESG-LVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLN---NKGQIKLADFGLAR  164 (302)
T ss_pred             cEEEEEcccCc-cHHHHHhcC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCcEEeCcccccc
Confidence            45789999985 777777543 35799999999999999999999999999999999999998   57899999999987


Q ss_pred             eccCCC--cccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCC-----
Q 014171          118 FIKPGK--KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR-----  188 (429)
Q Consensus       118 ~~~~~~--~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~-----  188 (429)
                      ......  ......++..|+|||.+.+  ..+.++||||+||++|+|++|++||...+.......+.........     
T Consensus       165 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (302)
T cd07864         165 LYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWPD  244 (302)
T ss_pred             cccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhccc
Confidence            664332  1223356778999998854  3478999999999999999999999877665555444332111000     


Q ss_pred             ---------------------CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          189 ---------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       189 ---------------------~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                                           ..+..++..+.+++.+||+.+|.+||++.+++.||||
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~~~~  302 (302)
T cd07864         245 VIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALNSPWL  302 (302)
T ss_pred             ccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhcCCCC
Confidence                                 1123468899999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.97  E-value=1.2e-29  Score=234.95  Aligned_cols=177  Identities=22%  Similarity=0.247  Sum_probs=145.7

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+||||+.+|+|.+++.......+++..+..++.|++.||.|||++|++||||||+||+++   .++.++|+|||.+.
T Consensus        74 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~---~~~~~~l~dfg~~~  150 (260)
T cd05070          74 PIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVG---DGLVCKIADFGLAR  150 (260)
T ss_pred             CcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEe---CCceEEeCCceeee
Confidence            357899999999999999765556789999999999999999999999999999999999998   47789999999997


Q ss_pred             eccCCCcc--cccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          118 FIKPGKKF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       118 ~~~~~~~~--~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      ........  ....++..|+|||.+.+ .++.++|+||+|+++|+|++ |.+||.+.+..+....+.....   .+....
T Consensus       151 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~  227 (260)
T cd05070         151 LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNREVLEQVERGYR---MPCPQD  227 (260)
T ss_pred             eccCcccccccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC---CCCCCc
Confidence            65433221  12234567999998764 45889999999999999999 8999988777666666654321   222345


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHh
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQAL  220 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l  220 (429)
                      .+..+++++.+||..+|++|||+.++.
T Consensus       228 ~~~~~~~li~~~l~~~p~~Rpt~~~l~  254 (260)
T cd05070         228 CPISLHELMLQCWKKDPEERPTFEYLQ  254 (260)
T ss_pred             CCHHHHHHHHHHcccCcccCcCHHHHH
Confidence            789999999999999999999999876

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.97  E-value=8.9e-30  Score=238.61  Aligned_cols=177  Identities=18%  Similarity=0.259  Sum_probs=145.2

Q ss_pred             ceeEeeecCCCChHHHHHhhcC-------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCC
Q 014171           39 KLRRIRLCEGGELLDRILAKKD-------------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED  105 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~-------------~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~  105 (429)
                      .++||||+.+|+|.+++.....             ..+++..+..++.|++.||.|||++|++||||||+||+++   .+
T Consensus        82 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~---~~  158 (280)
T cd05092          82 LLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVG---QG  158 (280)
T ss_pred             eEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEc---CC
Confidence            4789999999999999865432             3589999999999999999999999999999999999998   57


Q ss_pred             CCEEEeecccceeccCCCc---ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHH
Q 014171          106 SSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVL  180 (429)
Q Consensus       106 ~~~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~  180 (429)
                      +.++|+|||++........   .....+++.|+|||.+.+ .++.++|+||+||++|+|++ |.+||...........+.
T Consensus       159 ~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~  238 (280)
T cd05092         159 LVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECIT  238 (280)
T ss_pred             CCEEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHH
Confidence            8899999999876543221   122234678999998864 45889999999999999998 999998777777666665


Q ss_pred             hcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          181 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      .+...   .....+++.+++++.+||+.||.+||+++++++
T Consensus       239 ~~~~~---~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~  276 (280)
T cd05092         239 QGREL---ERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHS  276 (280)
T ss_pred             cCccC---CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            54332   222467899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.97  E-value=7.4e-30  Score=237.25  Aligned_cols=180  Identities=21%  Similarity=0.374  Sum_probs=143.7

Q ss_pred             ccceeEeeecCCCChHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecc
Q 014171           37 LRKLRRIRLCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG  114 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg  114 (429)
                      ...++|+||+++|+|.+++...  +...+++..+..++.|++.||.|||++|++|+||+|+||+++   .++.++|+|||
T Consensus        75 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~---~~~~~~l~d~g  151 (267)
T cd08228          75 NELNIVLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFIT---ATGVVKLGDLG  151 (267)
T ss_pred             CeEEEEEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEc---CCCCEEECccc
Confidence            4457899999999999888543  235589999999999999999999999999999999999998   47789999999


Q ss_pred             cceeccCCCc-ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCCh--hHHHHHHHhcCCCCCCCC
Q 014171          115 LSDFIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE--DGIFKEVLRNKPDFRRKP  190 (429)
Q Consensus       115 ~a~~~~~~~~-~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~  190 (429)
                      .+........ .....+++.|+|||.+.+ ..+.++|+||+|+++|+|++|+.||.....  ......+....  .++..
T Consensus       152 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~  229 (267)
T cd08228         152 LGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLFSLCQKIEQCD--YPPLP  229 (267)
T ss_pred             cceeccchhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccccHHHHHHHHhcCC--CCCCC
Confidence            9876643222 234468889999998864 457889999999999999999999965532  23333333222  23223


Q ss_pred             CCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          191 WPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       191 ~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ...++..+++++.+||..+|++||++.++++
T Consensus       230 ~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~  260 (267)
T cd08228         230 TEHYSEKLRELVSMCIYPDPDQRPDIGYVHQ  260 (267)
T ss_pred             hhhcCHHHHHHHHHHCCCCcccCcCHHHHHH
Confidence            3457889999999999999999999999985

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.97  E-value=1e-29  Score=234.90  Aligned_cols=177  Identities=19%  Similarity=0.293  Sum_probs=144.8

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+||||++||+|.+++.... +.+++..+..++.|++.||.|||++|++||||||+||+++   .++.+||+|||.++.
T Consensus        74 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~---~~~~~kl~dfg~~~~  149 (256)
T cd05059          74 IFIVTEYMANGCLLNYLRERK-GKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVG---EDNVVKVSDFGLARY  149 (256)
T ss_pred             eEEEEecCCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEEC---CCCcEEECCccccee
Confidence            578999999999999986543 4789999999999999999999999999999999999998   578899999999876


Q ss_pred             ccCCCccc--ccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          119 IKPGKKFQ--DIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       119 ~~~~~~~~--~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      ........  ...++..|+|||.+. ..++.++|+||+|+++|+|++ |..||...+..+....+......   ......
T Consensus       150 ~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~  226 (256)
T cd05059         150 VLDDQYTSSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYRL---YRPKLA  226 (256)
T ss_pred             cccccccccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCcC---CCCCCC
Confidence            54322211  112345799999886 456889999999999999999 89999887777776666544221   122357


Q ss_pred             CHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      +..+.+++.+||+.+|.+|||+.++++.
T Consensus       227 ~~~~~~li~~cl~~~p~~Rpt~~~~l~~  254 (256)
T cd05059         227 PTEVYTIMYSCWHEKPEDRPAFKKLLSQ  254 (256)
T ss_pred             CHHHHHHHHHHhcCChhhCcCHHHHHHH
Confidence            8999999999999999999999999853

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.97  E-value=1.5e-29  Score=234.46  Aligned_cols=178  Identities=22%  Similarity=0.251  Sum_probs=146.2

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+||||+.||+|.+++....+..+++..+..++.|++.||.|||++|++||||||+||+++   .++.++|+|||++.
T Consensus        75 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~~l~dfg~~~  151 (261)
T cd05068          75 PIYIVTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVG---ENNICKVADFGLAR  151 (261)
T ss_pred             CeeeeeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEc---CCCCEEECCcceEE
Confidence            457899999999999999766555799999999999999999999999999999999999999   47889999999998


Q ss_pred             eccCCCcc--cccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          118 FIKPGKKF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       118 ~~~~~~~~--~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      ........  .....+..|+|||.+.+ .++.++|+||+|+++|+|++ |+.||.+.........+..... .  +....
T Consensus       152 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~-~--~~~~~  228 (261)
T cd05068         152 VIKEDIYEAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYR-M--PCPPG  228 (261)
T ss_pred             EccCCcccccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCC-C--CCCCc
Confidence            76532221  11122457999998864 45889999999999999999 9999988777776666654432 1  22245


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ++..+.+++.+||+.+|.+||+++++++
T Consensus       229 ~~~~~~~li~~~l~~~P~~Rp~~~~l~~  256 (261)
T cd05068         229 CPKELYDIMLDCWKEDPDDRPTFETLQW  256 (261)
T ss_pred             CCHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence            7899999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.97  E-value=9.2e-30  Score=237.90  Aligned_cols=179  Identities=21%  Similarity=0.263  Sum_probs=145.8

Q ss_pred             ccceeEeeecCCCChHHHHHhhc--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCE
Q 014171           37 LRKLRRIRLCEGGELLDRILAKK--------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL  108 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~--------~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~  108 (429)
                      ...|+||||+.+|+|.+++....        ...+++..+..++.|++.||.|||++|++||||||+||+++   .++.+
T Consensus        82 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~---~~~~~  158 (277)
T cd05032          82 QPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVA---EDLTV  158 (277)
T ss_pred             CCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEc---CCCCE
Confidence            34578999999999999986542        23478889999999999999999999999999999999999   57889


Q ss_pred             EEeecccceeccCCCc---ccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcC
Q 014171          109 KATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNK  183 (429)
Q Consensus       109 kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~  183 (429)
                      ||+|||.++.+.....   .....++..|+|||.+. +.++.++|+||+||++|++++ |..||.+.+..+....+....
T Consensus       159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~  238 (277)
T cd05032         159 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVIDGG  238 (277)
T ss_pred             EECCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhcCC
Confidence            9999999876543322   12334577899999886 456889999999999999998 999998888777776665332


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          184 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       184 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ..   ......+..+.+++.+||+.+|++|||+.++++
T Consensus       239 ~~---~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~  273 (277)
T cd05032         239 HL---DLPENCPDKLLELMRMCWQYNPKMRPTFLEIVS  273 (277)
T ss_pred             CC---CCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            21   112346899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.97  E-value=7.6e-30  Score=246.01  Aligned_cols=183  Identities=32%  Similarity=0.483  Sum_probs=145.7

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|+||+. ++|....    +..+++..+..++.|++.||.|||+.|++||||||+||+++   .++.++|+|||++..
T Consensus        95 ~~lv~e~~~-~~l~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~---~~~~~kL~dfg~~~~  166 (342)
T cd07879          95 FYLVMPYMQ-TDLQKIM----GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVN---EDCELKILDFGLARH  166 (342)
T ss_pred             EEEEecccc-cCHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEeeCCCCcC
Confidence            468999996 4666544    24689999999999999999999999999999999999998   478999999999876


Q ss_pred             ccCCCcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcC-------------
Q 014171          119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK-------------  183 (429)
Q Consensus       119 ~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~-------------  183 (429)
                      ....  .....+++.|+|||.+.+  .++.++|+||+||++|+|++|+.||.+.+....+..+....             
T Consensus       167 ~~~~--~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (342)
T cd07879         167 ADAE--MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEFVQKLED  244 (342)
T ss_pred             CCCC--CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHHHHHhcc
Confidence            5322  234467889999998864  35889999999999999999999998876554444433211             


Q ss_pred             ----------CCCCCC----CCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCC
Q 014171          184 ----------PDFRRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA  231 (429)
Q Consensus       184 ----------~~~~~~----~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~  231 (429)
                                +..+..    .++..+..+.+||.+||+.||.+||++++++.||||+.....
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~~  306 (342)
T cd07879         245 KAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRDA  306 (342)
T ss_pred             cchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhcccc
Confidence                      111111    123567889999999999999999999999999999886543

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.97  E-value=1e-29  Score=234.31  Aligned_cols=177  Identities=20%  Similarity=0.273  Sum_probs=141.5

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+||||+.+|+|.+++... ...+++..+..++.|++.||.|||++|++||||||+||+++   .++.+||+|||.+.
T Consensus        67 ~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~~  142 (252)
T cd05084          67 PIYIVMELVQGGDFLTFLRTE-GPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVT---EKNVLKISDFGMSR  142 (252)
T ss_pred             CeEEEEeeccCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEc---CCCcEEECccccCc
Confidence            357899999999999988543 35689999999999999999999999999999999999998   57789999999987


Q ss_pred             eccCCCcc---cccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCC
Q 014171          118 FIKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWP  192 (429)
Q Consensus       118 ~~~~~~~~---~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  192 (429)
                      ........   ....++..|+|||.+.+ .++.++|+||+||++|+|++ |..||...+.......+.....   .....
T Consensus       143 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~~~~---~~~~~  219 (252)
T cd05084         143 EEEDGVYASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQGVR---LPCPE  219 (252)
T ss_pred             ccccccccccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHcCCC---CCCcc
Confidence            54422111   11122456999998864 45889999999999999998 8899877766655555544322   12234


Q ss_pred             CCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          193 SISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       193 ~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ..+..+.+++.+||+.+|.+|||+.++++
T Consensus       220 ~~~~~~~~li~~~l~~~p~~Rps~~~~~~  248 (252)
T cd05084         220 LCPDAVYRLMERCWEYDPGQRPSFSTVHQ  248 (252)
T ss_pred             cCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            57899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.97  E-value=8.4e-30  Score=236.41  Aligned_cols=178  Identities=24%  Similarity=0.268  Sum_probs=146.9

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+||||+.+|+|.+++.+.....+++..+..++.|++.||.|||+.|++|+||||+||+++   .++.++|+|||.+.
T Consensus        74 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~---~~~~~~L~dfg~~~  150 (262)
T cd05071          74 PIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLAR  150 (262)
T ss_pred             CcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEc---CCCcEEeccCCcee
Confidence            357899999999999999765556789999999999999999999999999999999999998   47889999999997


Q ss_pred             eccCCCcc--cccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          118 FIKPGKKF--QDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       118 ~~~~~~~~--~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      ........  ....++..|+|||... +.++.++|+||+||++|+|++ |..||.+....+....+.....   .+....
T Consensus       151 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~  227 (262)
T cd05071         151 LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR---MPCPPE  227 (262)
T ss_pred             eccccccccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHHHHHHhcCCC---CCCccc
Confidence            66533321  2234567899999875 456889999999999999999 8889988777776666554432   122245


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ++..+.+++.+||+.+|.+||+++++++
T Consensus       228 ~~~~l~~li~~~l~~~p~~Rp~~~~~~~  255 (262)
T cd05071         228 CPESLHDLMCQCWRKEPEERPTFEYLQA  255 (262)
T ss_pred             cCHHHHHHHHHHccCCcccCCCHHHHHH
Confidence            7899999999999999999999998764

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.97  E-value=9.2e-30  Score=235.81  Aligned_cols=178  Identities=23%  Similarity=0.261  Sum_probs=146.9

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+||||+.+|+|.+++.......+++..+..++.|++.||.|||+.|++|+||||+||+++   .++.++|+|||.+.
T Consensus        74 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~---~~~~~~l~dfg~~~  150 (260)
T cd05069          74 PIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVG---DNLVCKIADFGLAR  150 (260)
T ss_pred             CcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEc---CCCeEEECCCccce
Confidence            357899999999999999766555689999999999999999999999999999999999998   57889999999997


Q ss_pred             eccCCCcc--cccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          118 FIKPGKKF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       118 ~~~~~~~~--~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      ........  ....++..|+|||...+ ..+.++|+||+|+++|+|++ |..||.+....+....+.....   .+....
T Consensus       151 ~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~  227 (260)
T cd05069         151 LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNREVLEQVERGYR---MPCPQG  227 (260)
T ss_pred             EccCCcccccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC---CCCCcc
Confidence            66433221  22345678999998864 45889999999999999999 9999988877776666554421   222346


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      .+..+++++.+||+.||.+||+++++++
T Consensus       228 ~~~~~~~li~~~l~~~p~~Rp~~~~i~~  255 (260)
T cd05069         228 CPESLHELMKLCWKKDPDERPTFEYIQS  255 (260)
T ss_pred             cCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            7899999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.97  E-value=1e-29  Score=239.49  Aligned_cols=183  Identities=24%  Similarity=0.408  Sum_probs=140.1

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|+||+. ++|.+++... ...+++..+..++.|++.||.|||++||+|+||||+||+++   .++.++|+|||++.
T Consensus        77 ~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~---~~~~~~l~Dfg~~~  151 (291)
T cd07870          77 TLTFVFEYMH-TDLAQYMIQH-PGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLIS---YLGELKLADFGLAR  151 (291)
T ss_pred             eEEEEEeccc-CCHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEc---CCCcEEEecccccc
Confidence            4578999996 7888877544 35688999999999999999999999999999999999998   57889999999987


Q ss_pred             eccCCC-cccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChh-HHHHHHHhc-----------
Q 014171          118 FIKPGK-KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLRN-----------  182 (429)
Q Consensus       118 ~~~~~~-~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~~~-----------  182 (429)
                      ...... ......+++.|+|||.+.+  .++.++|+||+||++|+|++|..||.+.... +.+..+...           
T Consensus       152 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (291)
T cd07870         152 AKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPG  231 (291)
T ss_pred             ccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhh
Confidence            543221 2233457889999999864  3578899999999999999999999765432 222221110           


Q ss_pred             ---CCCCCCC------------CCC--CCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          183 ---KPDFRRK------------PWP--SISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       183 ---~~~~~~~------------~~~--~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                         .+.+...            .+.  ..+..+.+++.+||+.||.+|||+++++.||||
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~h~~~  291 (291)
T cd07870         232 VSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALLHPYF  291 (291)
T ss_pred             hhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhcCCCC
Confidence               0000000            001  125688999999999999999999999999997

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.97  E-value=6.9e-30  Score=236.06  Aligned_cols=180  Identities=20%  Similarity=0.278  Sum_probs=148.1

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...++|+||+.+|+|.+.+.+.....+++..+..++.|++.||.|||++|++|+||+|+||+++   .++.+||+|||.+
T Consensus        68 ~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~---~~~~~kl~dfg~~  144 (257)
T cd05040          68 HPLMMVTELAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLA---SDDKVKIGDFGLM  144 (257)
T ss_pred             CeEEEEEEecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEe---cCCEEEecccccc
Confidence            3457899999999999999765435789999999999999999999999999999999999999   4689999999998


Q ss_pred             eeccCCCc----ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCC
Q 014171          117 DFIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKP  190 (429)
Q Consensus       117 ~~~~~~~~----~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~  190 (429)
                      ........    .....++..|+|||.+.+ .++.++|+||+||++|+|++ |..||...+..+....+........  .
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~--~  222 (257)
T cd05040         145 RALPQNEDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKIDKEGERLE--R  222 (257)
T ss_pred             ccccccccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCcCC--C
Confidence            87643221    122356778999998864 56889999999999999998 9999987777776666654332222  2


Q ss_pred             CCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          191 WPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       191 ~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ....+..+.+++.+||+.+|.+||++.++++
T Consensus       223 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  253 (257)
T cd05040         223 PEACPQDIYNVMLQCWAHNPADRPTFAALRE  253 (257)
T ss_pred             CccCCHHHHHHHHHHCCCCcccCCCHHHHHH
Confidence            2356889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.97  E-value=7.4e-30  Score=238.68  Aligned_cols=179  Identities=35%  Similarity=0.639  Sum_probs=151.2

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..++||||+.+|+|.+++.+.  +.+++..+..++.|++.||.|||++|++|+||+|+||+++   .++.++|+|||.+.
T Consensus        76 ~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~---~~~~~~l~df~~~~  150 (280)
T cd05581          76 NLYFVLEYAPNGELLQYIRKY--GSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLD---KDMHIKITDFGTAK  150 (280)
T ss_pred             eEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEEC---CCCCEEecCCcccc
Confidence            346899999999999999654  5899999999999999999999999999999999999998   57889999999987


Q ss_pred             eccCCC---------------------cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHH
Q 014171          118 FIKPGK---------------------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGI  175 (429)
Q Consensus       118 ~~~~~~---------------------~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~  175 (429)
                      ......                     ......++..|+|||.+.. ..+.++|+||+|++++++++|+.||...+....
T Consensus       151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~  230 (280)
T cd05581         151 VLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNEYLT  230 (280)
T ss_pred             ccCCccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccHHHH
Confidence            654322                     1123456789999998764 457889999999999999999999988876666


Q ss_pred             HHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCH----HHHhCCCcc
Q 014171          176 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA----AQALSHPWV  225 (429)
Q Consensus       176 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~----~e~l~h~~~  225 (429)
                      ...+......++    ..+++.+.++|.+||+.+|.+||++    +++++||||
T Consensus       231 ~~~~~~~~~~~~----~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~~~~~  280 (280)
T cd05581         231 FQKILKLEYSFP----PNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKAHPFF  280 (280)
T ss_pred             HHHHHhcCCCCC----CccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhcCCCC
Confidence            666654443333    3568999999999999999999999    999999997

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.97  E-value=1.1e-29  Score=236.48  Aligned_cols=181  Identities=19%  Similarity=0.287  Sum_probs=140.6

Q ss_pred             ccceeEeeecCCCChHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeec
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKD---SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF  113 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~---~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Df  113 (429)
                      ...|+||||+.+|+|.+++...+.   ...++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+||
T Consensus        68 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~---~~~~~kl~df  144 (269)
T cd05042          68 IPYLLVLEFCPLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLT---ADLSVKIGDY  144 (269)
T ss_pred             CceEEEEEeCCCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEec---CCCcEEEecc
Confidence            345789999999999999966532   3357888899999999999999999999999999999998   5788999999


Q ss_pred             ccceeccCCCc---ccccccCCcccccccccC--------CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHh
Q 014171          114 GLSDFIKPGKK---FQDIVGSAYYVAPEVLKR--------KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR  181 (429)
Q Consensus       114 g~a~~~~~~~~---~~~~~g~~~y~aPE~~~~--------~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~  181 (429)
                      |++........   .....+++.|+|||++..        ..+.++||||+||++|+|++ |..||......+....+..
T Consensus       145 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~  224 (269)
T cd05042         145 GLALEQYPEDYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVR  224 (269)
T ss_pred             ccccccccchheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhh
Confidence            99865432211   122345677999998742        34778999999999999999 7888877776666555544


Q ss_pred             cC-CCCCCC-CCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          182 NK-PDFRRK-PWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       182 ~~-~~~~~~-~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      .. ...+.+ ....++..+.+++..|| .||.+|||++++++
T Consensus       225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~  265 (269)
T cd05042         225 EQDIKLPKPQLDLKYSDRWYEVMQFCW-LDPETRPTAEEVHE  265 (269)
T ss_pred             ccCccCCCCcccccCCHHHHHHHHHHh-cCcccccCHHHHHH
Confidence            33 222222 22357888999999998 59999999999875

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.97  E-value=5.1e-30  Score=246.60  Aligned_cols=187  Identities=25%  Similarity=0.341  Sum_probs=149.5

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+||||+. |+|.+++...  ..+++..+..++.|++.||.|||+.|++|+||+|+||+++   ..+.++|+|||.+.
T Consensus        94 ~~~lv~e~~~-~~l~~~l~~~--~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~---~~~~~kl~dfg~~~  167 (335)
T PTZ00024         94 FINLVMDIMA-SDLKKVVDRK--IRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFIN---SKGICKIADFGLAR  167 (335)
T ss_pred             cEEEEEeccc-cCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEEC---CCCCEEECCcccee
Confidence            3568999997 6899988543  5799999999999999999999999999999999999998   47889999999987


Q ss_pred             eccCC---------------CcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHH
Q 014171          118 FIKPG---------------KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL  180 (429)
Q Consensus       118 ~~~~~---------------~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~  180 (429)
                      .....               .......+++.|+|||.+.+  .++.++|+||+||++|+|++|++||.+.+..+....+.
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~  247 (335)
T PTZ00024        168 RYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIF  247 (335)
T ss_pred             ecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            65411               11123346788999998864  34789999999999999999999998887766655544


Q ss_pred             hcCCCCCC------------------------CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          181 RNKPDFRR------------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       181 ~~~~~~~~------------------------~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                      ........                        ...+..+.++.++|.+||+.+|++|||+++++.||||+....
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~~~~~~~~~  321 (335)
T PTZ00024        248 ELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLNPLERISAKEALKHEYFKSDPL  321 (335)
T ss_pred             HHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhcCcccCCCCC
Confidence            32110000                        012345788999999999999999999999999999997654

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.97  E-value=1.2e-29  Score=237.51  Aligned_cols=178  Identities=22%  Similarity=0.241  Sum_probs=143.9

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...++++||+++|+|.+++... .+.+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++
T Consensus        81 ~~~~l~~~~~~~g~l~~~l~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~---~~~~~kL~dfG~~  156 (279)
T cd05109          81 STVQLVTQLMPYGCLLDYVREN-KDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVK---SPNHVKITDFGLA  156 (279)
T ss_pred             CCcEEEEEcCCCCCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEc---CCCcEEECCCCce
Confidence            3456899999999999988654 35799999999999999999999999999999999999998   4678999999999


Q ss_pred             eeccCCCcc---cccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCC
Q 014171          117 DFIKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPW  191 (429)
Q Consensus       117 ~~~~~~~~~---~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  191 (429)
                      .........   ....+++.|+|||.+.+ .++.++||||+||++|+|++ |..||...........+..+.. .  +..
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~-~--~~~  233 (279)
T cd05109         157 RLLDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEKGER-L--PQP  233 (279)
T ss_pred             eecccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHCCCc-C--CCC
Confidence            876533221   12234568999998854 46889999999999999998 8999877666555554443322 1  223


Q ss_pred             CCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          192 PSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       192 ~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      +..+..+.+++.+||+.||.+||++.++++
T Consensus       234 ~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~  263 (279)
T cd05109         234 PICTIDVYMIMVKCWMIDSECRPRFRELVD  263 (279)
T ss_pred             ccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            457899999999999999999999999984

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.97  E-value=1.1e-29  Score=238.16  Aligned_cols=177  Identities=17%  Similarity=0.233  Sum_probs=145.9

Q ss_pred             ceeEeeecCCCChHHHHHhh--------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCC
Q 014171           39 KLRRIRLCEGGELLDRILAK--------------KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE  104 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~--------------~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~  104 (429)
                      .++++||+.+++|.+++...              ....+++..+..++.|++.||.|||++||+||||||+||+++   .
T Consensus        83 ~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~---~  159 (283)
T cd05091          83 LSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVF---D  159 (283)
T ss_pred             eEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEec---C
Confidence            46799999999999998532              123588899999999999999999999999999999999998   4


Q ss_pred             CCCEEEeecccceeccCCCc---ccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHH
Q 014171          105 DSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV  179 (429)
Q Consensus       105 ~~~~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i  179 (429)
                      ++.+||+|||+++.......   .....+++.|+|||.+. +.++.++||||+||++|+|++ |..||.+....+....+
T Consensus       160 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i  239 (283)
T cd05091         160 KLNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMI  239 (283)
T ss_pred             CCceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence            67899999999876543221   12334577899999875 456889999999999999998 88899888877777777


Q ss_pred             HhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          180 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      .......   ....++..+.+++.+||+.+|.+||++.++++
T Consensus       240 ~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~  278 (283)
T cd05091         240 RNRQVLP---CPDDCPAWVYTLMLECWNEFPSRRPRFKDIHS  278 (283)
T ss_pred             HcCCcCC---CCCCCCHHHHHHHHHHhCCCcccCCCHHHHHH
Confidence            6655322   22468899999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.97  E-value=5.5e-30  Score=244.08  Aligned_cols=186  Identities=27%  Similarity=0.422  Sum_probs=141.1

Q ss_pred             ceeEeeecCCCChHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEee-cCCCCCEEEeecc
Q 014171           39 KLRRIRLCEGGELLDRILAKK---DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS-AKEDSSLKATDFG  114 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~---~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~-~~~~~~~kL~Dfg  114 (429)
                      .|+|||||. ++|.+.+....   ...+++..+..++.||+.||.|||+.||+||||||+||+++. ....+.+||+|||
T Consensus        79 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg  157 (316)
T cd07842          79 VYLLFDYAE-HDLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLG  157 (316)
T ss_pred             EEEEEeCCC-cCHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCc
Confidence            468999997 47777775432   236899999999999999999999999999999999999984 1126889999999


Q ss_pred             cceeccCCCc----ccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhH---------HHHHH
Q 014171          115 LSDFIKPGKK----FQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDG---------IFKEV  179 (429)
Q Consensus       115 ~a~~~~~~~~----~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---------~~~~i  179 (429)
                      ++........    .....+++.|+|||.+.+  .++.++|+||+||++|+|++|++||.+.....         ....+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (316)
T cd07842         158 LARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERI  237 (316)
T ss_pred             cccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHH
Confidence            9876543222    234467889999998764  35789999999999999999999997654332         11111


Q ss_pred             HhcC--------------C-------CCCCCCCC------------CCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          180 LRNK--------------P-------DFRRKPWP------------SISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       180 ~~~~--------------~-------~~~~~~~~------------~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                      ....              +       .......+            ..+..+.+++.+||+.||.+|||+.++++||||
T Consensus       238 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~~~~f  316 (316)
T cd07842         238 FEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALEHPYF  316 (316)
T ss_pred             HHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhcCCCC
Confidence            1000              0       00001111            456789999999999999999999999999998

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.97  E-value=1.2e-29  Score=235.80  Aligned_cols=181  Identities=22%  Similarity=0.387  Sum_probs=143.7

Q ss_pred             cccceeEeeecCCCChHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeec
Q 014171           36 PLRKLRRIRLCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF  113 (429)
Q Consensus        36 ~~~~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Df  113 (429)
                      ....++|+||+.||+|.+++...  ....+++..+..++.||+.||.|||++|++|+||+|+||+++   .++.++|+||
T Consensus        74 ~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~---~~~~~~l~df  150 (267)
T cd08229          74 DNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT---ATGVVKLGDL  150 (267)
T ss_pred             CCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCCEEECcc
Confidence            34467899999999999988642  235689999999999999999999999999999999999998   4778999999


Q ss_pred             ccceeccCCCc-ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChh--HHHHHHHhcCCCCCCC
Q 014171          114 GLSDFIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED--GIFKEVLRNKPDFRRK  189 (429)
Q Consensus       114 g~a~~~~~~~~-~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~  189 (429)
                      |++........ .....++..|+|||.+.+ ..+.++|+||+|+++|+|++|..||.+....  .....+....  .+..
T Consensus       151 g~~~~~~~~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~  228 (267)
T cd08229         151 GLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD--YPPL  228 (267)
T ss_pred             hhhhccccCCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccchHHHHhhhhhcCC--CCCC
Confidence            99876543322 234568889999999864 4578999999999999999999999765432  2223332221  2222


Q ss_pred             CCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          190 PWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       190 ~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ....++..+++++.+||..+|.+|||+.++++
T Consensus       229 ~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~  260 (267)
T cd08229         229 PSDHYSEELRQLVNMCINPDPEKRPDITYVYD  260 (267)
T ss_pred             CcccccHHHHHHHHHhcCCCcccCCCHHHHHH
Confidence            33457889999999999999999999997763

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.97  E-value=1.6e-29  Score=233.28  Aligned_cols=182  Identities=26%  Similarity=0.388  Sum_probs=151.8

Q ss_pred             ccceeEeeecCCCChHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKK--DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG  114 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg  114 (429)
                      ...|+|+||+++++|.+++.+..  ...+++..+..++.|++.||.|||+.|++|+||+|+||+++   .++.++|+|||
T Consensus        72 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~---~~~~~kl~d~g  148 (256)
T cd08530          72 NKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLV---ANDLVKIGDLG  148 (256)
T ss_pred             CEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEe---cCCcEEEeecc
Confidence            34578999999999999886532  35689999999999999999999999999999999999999   47889999999


Q ss_pred             cceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          115 LSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       115 ~a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      ++...... ......+++.|+|||.+.+ .++.++|+||+|+++|+|++|+.||...+.......+......   .....
T Consensus       149 ~~~~~~~~-~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~  224 (256)
T cd08530         149 ISKVLKKN-MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQDLRYKVQRGKYP---PIPPI  224 (256)
T ss_pred             chhhhccC-CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCC---CCchh
Confidence            98776544 3334567889999999865 3578999999999999999999999888776665555544322   12235


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                      .+.++++++.+||+.+|.+||++.++++||++
T Consensus       225 ~~~~~~~li~~~l~~~p~~Rp~~~~~l~~p~~  256 (256)
T cd08530         225 YSQDLQNFIRSMLQVKPKLRPNCDKILASPAV  256 (256)
T ss_pred             hCHHHHHHHHHHcCCCcccCCCHHHHhcCCCC
Confidence            78899999999999999999999999999974

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.97  E-value=1.2e-29  Score=241.05  Aligned_cols=182  Identities=24%  Similarity=0.367  Sum_probs=143.6

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|+||+. ++|...+... ...+++..+..++.|+++||.|||++||+|+||||+||+++   .++.++|+|||++..
T Consensus        90 ~~lv~~~~~-~~l~~~~~~~-~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~~  164 (311)
T cd07866          90 VYMVTPYMD-HDLSGLLENP-SVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILID---NQGILKIADFGLARP  164 (311)
T ss_pred             EEEEEecCC-cCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCCEEECcCccchh
Confidence            367999997 4777766543 35799999999999999999999999999999999999998   578999999999875


Q ss_pred             ccCCCc------------ccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCC
Q 014171          119 IKPGKK------------FQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP  184 (429)
Q Consensus       119 ~~~~~~------------~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~  184 (429)
                      ......            .....+++.|+|||.+.+  .++.++|+||+||++|+|++|++||.+.+.......+.....
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~  244 (311)
T cd07866         165 YDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCG  244 (311)
T ss_pred             ccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence            532221            123356788999998754  358899999999999999999999988776655554433211


Q ss_pred             CCCC--------------------------CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          185 DFRR--------------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       185 ~~~~--------------------------~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                      ....                          ..+..++..+.++|.+||+.||.+|||+.+++.||||
T Consensus       245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~~~~f  311 (311)
T cd07866         245 TPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALEHPYF  311 (311)
T ss_pred             CCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhcCCCC
Confidence            1000                          0112345778999999999999999999999999998

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.97  E-value=9.4e-30  Score=239.94  Aligned_cols=179  Identities=23%  Similarity=0.285  Sum_probs=145.9

Q ss_pred             cceeEeeecCCCChHHHHHhh--------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecC
Q 014171           38 RKLRRIRLCEGGELLDRILAK--------------KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK  103 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~--------------~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~  103 (429)
                      ..|+|||||.+|+|..++...              ....+++..+..++.|++.||.|||++||+||||||+||+++   
T Consensus        90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Nil~~---  166 (293)
T cd05053          90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNVLVT---  166 (293)
T ss_pred             CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeEEEc---
Confidence            357899999999999998653              235689999999999999999999999999999999999998   


Q ss_pred             CCCCEEEeecccceeccCCCc---ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHH
Q 014171          104 EDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE  178 (429)
Q Consensus       104 ~~~~~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~  178 (429)
                      .++.++|+|||.+........   .....++..|+|||.+.+ .++.++||||+||++|++++ |..||.+.........
T Consensus       167 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~  246 (293)
T cd05053         167 EDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKL  246 (293)
T ss_pred             CCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHH
Confidence            578999999999886643322   112234567999998754 56889999999999999997 9999988877776665


Q ss_pred             HHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          179 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       179 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      +..... .  ......+..+.+|+.+||..+|.+|||+.+++++
T Consensus       247 ~~~~~~-~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~  287 (293)
T cd05053         247 LKEGYR-M--EKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVED  287 (293)
T ss_pred             HHcCCc-C--CCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHH
Confidence            554432 1  1223578899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.97  E-value=1.5e-29  Score=237.03  Aligned_cols=184  Identities=27%  Similarity=0.470  Sum_probs=147.6

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...++|+||+. ++|.+++.+.. ..+++..+..++.|++.||.|||++||+||||+|+||+++   .++.++|+|||.+
T Consensus        71 ~~~~~v~e~~~-~~l~~~i~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~---~~~~~~l~d~g~~  145 (282)
T cd07829          71 RKLYLVFEYCD-MDLKKYLDKRP-GPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILIN---RDGVLKLADFGLA  145 (282)
T ss_pred             CceEEEecCcC-cCHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEc---CCCCEEEecCCcc
Confidence            34568999998 58999886543 5799999999999999999999999999999999999999   4789999999998


Q ss_pred             eeccCCC-cccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCC---------
Q 014171          117 DFIKPGK-KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP---------  184 (429)
Q Consensus       117 ~~~~~~~-~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~---------  184 (429)
                      ....... ......++..|+|||.+.+  .++.++|+||+||++|++++|.+||.+.+..+....+.....         
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (282)
T cd07829         146 RAFGIPLRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPG  225 (282)
T ss_pred             cccCCCccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHh
Confidence            7664332 2234456778999998854  458899999999999999999999987766555444332110         


Q ss_pred             ---------CCC-------CCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          185 ---------DFR-------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       185 ---------~~~-------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                               .++       ...++.++..+.++|.+||..+|.+||++.+++.||||
T Consensus       226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~~p~~  282 (282)
T cd07829         226 VTKLPDYKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALKHPYF  282 (282)
T ss_pred             hcccccccccccccCccchHHhcccccHHHHHHHHHhhccCcccCCCHHHHhhCcCC
Confidence                     000       01223457889999999999999999999999999997

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.97  E-value=1.3e-29  Score=243.77  Aligned_cols=156  Identities=23%  Similarity=0.285  Sum_probs=124.8

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc---ccccccCCcccccc
Q 014171           62 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPE  138 (429)
Q Consensus        62 ~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE  138 (429)
                      .+++..+..++.||+.||.|||++||+||||||+||+++   .++.++|+|||++..+.....   .....++..|+|||
T Consensus       169 ~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~---~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE  245 (337)
T cd05054         169 PLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE  245 (337)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEe---CCCcEEEeccccchhcccCcchhhccCCCCCccccCcH
Confidence            689999999999999999999999999999999999999   477899999999986543221   12334567899999


Q ss_pred             ccc-CCCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCH
Q 014171          139 VLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA  216 (429)
Q Consensus       139 ~~~-~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~  216 (429)
                      .+. ..++.++||||+||++|+|++ |..||.+....+.............  .....++++.+++.+||+.+|.+||++
T Consensus       246 ~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~cl~~~p~~RPs~  323 (337)
T cd05054         246 SIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDEEFCRRLKEGTRMR--APEYATPEIYSIMLDCWHNNPEDRPTF  323 (337)
T ss_pred             HhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccHHHHHHHhccCCCC--CCccCCHHHHHHHHHHccCChhhCcCH
Confidence            875 456889999999999999998 9999987654444433333322211  123568899999999999999999999


Q ss_pred             HHHhCC
Q 014171          217 AQALSH  222 (429)
Q Consensus       217 ~e~l~h  222 (429)
                      .++++|
T Consensus       324 ~ell~~  329 (337)
T cd05054         324 SELVEI  329 (337)
T ss_pred             HHHHHH
Confidence            999864

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.97  E-value=2.1e-29  Score=232.09  Aligned_cols=180  Identities=32%  Similarity=0.518  Sum_probs=150.2

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|+||+++++|.+++...  ..+++..+..++.|++.||.|||++|++||||+|+||+++   .++.++|+|||.+.
T Consensus        73 ~~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~---~~~~~~l~d~~~~~  147 (254)
T cd06627          73 SLYIILEYAENGSLRQIIKKF--GPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTT---KDGVVKLADFGVAT  147 (254)
T ss_pred             EEEEEEecCCCCcHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEC---CCCCEEEeccccce
Confidence            457899999999999988654  6899999999999999999999999999999999999998   47899999999998


Q ss_pred             eccCCCc-ccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~~~~~-~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      ....... .....++..|+|||.+.+. .+.++|+||+|+++|+|++|..||...........+....   .....+.++
T Consensus       148 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~  224 (254)
T cd06627         148 KLNDVSKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNPMAALFRIVQDD---HPPLPEGIS  224 (254)
T ss_pred             ecCCCcccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHhccC---CCCCCCCCC
Confidence            7654333 2345678899999988643 4788999999999999999999998766544444433222   122334678


Q ss_pred             HHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          196 NSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                      ..+++++.+||..+|++|||+.+++.||||
T Consensus       225 ~~~~~~i~~~l~~~p~~R~~~~~~l~~~~~  254 (254)
T cd06627         225 PELKDFLMQCFQKDPNLRPTAKQLLKHPWI  254 (254)
T ss_pred             HHHHHHHHHHHhCChhhCcCHHHHhcCCCC
Confidence            999999999999999999999999999997

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.97  E-value=1.9e-29  Score=232.80  Aligned_cols=175  Identities=22%  Similarity=0.295  Sum_probs=145.3

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+||||+.+|+|.+++.......+++..+..++.|++.||.|||++|++||||||+||+++   .++.++|+|||.+..
T Consensus        73 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~---~~~~~kl~Dfg~~~~  149 (254)
T cd05083          73 LYIVMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVS---EDGVAKVSDFGLARV  149 (254)
T ss_pred             cEEEEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEc---CCCcEEECCCcccee
Confidence            47899999999999999766555689999999999999999999999999999999999998   478899999999876


Q ss_pred             ccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCH
Q 014171          119 IKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN  196 (429)
Q Consensus       119 ~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  196 (429)
                      .....  .....+..|+|||.+.+ .++.++|+||+||++|+|++ |+.||...+..+....+..+.   .......++.
T Consensus       150 ~~~~~--~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~---~~~~~~~~~~  224 (254)
T cd05083         150 GSMGV--DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGY---RMEPPEGCPA  224 (254)
T ss_pred             ccccC--CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCC---CCCCCCcCCH
Confidence            43221  22334568999998864 56889999999999999997 999998887776666555442   1222346789


Q ss_pred             HHHHHHHHhccCCccCcCCHHHHhC
Q 014171          197 SAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       197 ~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      .+.+++.+||+.+|.+||++++++.
T Consensus       225 ~~~~li~~~l~~~p~~Rp~~~~l~~  249 (254)
T cd05083         225 DVYVLMTSCWETEPKKRPSFHKLRE  249 (254)
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHHH
Confidence            9999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.97  E-value=1.9e-29  Score=233.63  Aligned_cols=178  Identities=21%  Similarity=0.265  Sum_probs=147.6

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+||||+.+|+|.+++....+..+++.++..++.|++.||.|||+.|++||||||+||+++   .++.++|+|||.+.
T Consensus        74 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~---~~~~~~l~dfg~~~  150 (260)
T cd05067          74 PIYIITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVS---ETLCCKIADFGLAR  150 (260)
T ss_pred             CcEEEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEc---CCCCEEEccCccee
Confidence            457899999999999998776667899999999999999999999999999999999999998   57889999999987


Q ss_pred             eccCCCcc--cccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          118 FIKPGKKF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       118 ~~~~~~~~--~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      ........  ....++..|+|||.+.+ .++.++|+||+|+++|++++ |++||.+.+.......+.....   .+....
T Consensus       151 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~  227 (260)
T cd05067         151 LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYR---MPRPDN  227 (260)
T ss_pred             ecCCCCcccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCC---CCCCCC
Confidence            66532221  22345678999998864 45889999999999999999 9999988877766665544322   122345


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      .+.++.+++.+||+.+|++||++++++.
T Consensus       228 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~  255 (260)
T cd05067         228 CPEELYELMRLCWKEKPEERPTFEYLRS  255 (260)
T ss_pred             CCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            7889999999999999999999998863

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.97  E-value=2.8e-29  Score=238.56  Aligned_cols=183  Identities=26%  Similarity=0.408  Sum_probs=149.0

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|+||+. |+|.+.+... ...+++..+..++.|++.||.|||++|++||||+|+||+++   .++.++|+|||++
T Consensus        88 ~~~~lv~e~~~-~~l~~~~~~~-~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~---~~~~~kl~dfg~~  162 (308)
T cd06634          88 HTAWLVMEYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSA  162 (308)
T ss_pred             CeeEEEEEccC-CCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEEC---CCCcEEECCcccc
Confidence            44578999997 6888777544 35689999999999999999999999999999999999998   4788999999998


Q ss_pred             eeccCCCcccccccCCccccccccc----CCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCC
Q 014171          117 DFIKPGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP  192 (429)
Q Consensus       117 ~~~~~~~~~~~~~g~~~y~aPE~~~----~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  192 (429)
                      ......   ....+++.|+|||.+.    +..+.++||||+||++|+|++|..||...........+.....  +.....
T Consensus       163 ~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~--~~~~~~  237 (308)
T cd06634         163 SIMAPA---NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES--PALQSG  237 (308)
T ss_pred             eeecCc---ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHHHHHHHHhhcCC--CCcCcc
Confidence            765432   2346788999999874    3457899999999999999999999977665554444443322  111223


Q ss_pred             CCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          193 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       193 ~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      ..+..++++|.+||+.+|.+||+++++++|+|+....
T Consensus       238 ~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~~~~~~  274 (308)
T cd06634         238 HWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER  274 (308)
T ss_pred             cccHHHHHHHHHHhhCCcccCCCHHHHhhCccccccC
Confidence            5788999999999999999999999999999998853

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.97  E-value=3e-29  Score=233.48  Aligned_cols=180  Identities=17%  Similarity=0.268  Sum_probs=140.2

Q ss_pred             cceeEeeecCCCChHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           38 RKLRRIRLCEGGELLDRILAKK--DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      ..|+|||||++|+|.+++.+..  ...+++..+..++.||+.||.|||+.+++||||||+||+++   .++.++|+|||+
T Consensus        69 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~---~~~~~~l~Dfg~  145 (268)
T cd05086          69 PYLLVFEYCELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLT---SDLTVKVGDYGI  145 (268)
T ss_pred             ccEEEEecCCCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEc---CCccEEeccccc
Confidence            3578999999999999996542  23467788889999999999999999999999999999998   478899999998


Q ss_pred             ceeccCC---CcccccccCCcccccccccC--------CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcC
Q 014171          116 SDFIKPG---KKFQDIVGSAYYVAPEVLKR--------KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNK  183 (429)
Q Consensus       116 a~~~~~~---~~~~~~~g~~~y~aPE~~~~--------~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~  183 (429)
                      +......   .......++..|+|||++..        .++.++||||+||++|+|++ |..||...+..+.+..+....
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~~  225 (268)
T cd05086         146 GPSRYKEDYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVIKDQ  225 (268)
T ss_pred             ccccCcchhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhhc
Confidence            7543211   11234467889999998742        23678999999999999997 577887777766666655443


Q ss_pred             -CCCC-CCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          184 -PDFR-RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       184 -~~~~-~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                       .... +.....+++.+.+++..|| .+|.+||+++++++
T Consensus       226 ~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~  264 (268)
T cd05086         226 QVKLFKPQLELPYSERWYEVLQFCW-LSPEKRATAEEVHR  264 (268)
T ss_pred             ccccCCCccCCCCcHHHHHHHHHHh-hCcccCCCHHHHHH
Confidence             2222 2222357889999999999 67999999999864

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.97  E-value=9.8e-30  Score=245.52  Aligned_cols=184  Identities=30%  Similarity=0.465  Sum_probs=144.7

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|++++ |++|.+.+..   ..+++..+..++.|++.||.|||+.||+||||||+||+++   .++.++|+|||++..
T Consensus        97 ~~lv~~~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~---~~~~~kl~dfg~~~~  169 (345)
T cd07877          97 VYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARH  169 (345)
T ss_pred             EEEEehhc-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEc---CCCCEEEeccccccc
Confidence            35677776 7899877633   4699999999999999999999999999999999999998   578899999999876


Q ss_pred             ccCCCcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcC-------------
Q 014171          119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK-------------  183 (429)
Q Consensus       119 ~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~-------------  183 (429)
                      ...  ......++..|+|||.+.+  .++.++|+||+||++|+|++|+.||.+.........+....             
T Consensus       170 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  247 (345)
T cd07877         170 TDD--EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISS  247 (345)
T ss_pred             ccc--cccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHhhccc
Confidence            532  2234567889999998754  45789999999999999999999997766544433322211             


Q ss_pred             ----------CCCCCC----CCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCC
Q 014171          184 ----------PDFRRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA  231 (429)
Q Consensus       184 ----------~~~~~~----~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~  231 (429)
                                ...+..    .+...++++.++|.+||+.||.+||++.++++||||+....+
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h~~f~~~~~~  309 (345)
T cd07877         248 ESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDP  309 (345)
T ss_pred             HhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcChhhhhcCCC
Confidence                      011110    112357889999999999999999999999999999975443

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.97  E-value=1.2e-29  Score=244.32  Aligned_cols=185  Identities=29%  Similarity=0.434  Sum_probs=147.5

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+||||+. ++|..++..   +.+++..+..++.||+.||.|||++||+|+||+|+||+++   .++.++|+|||.+..
T Consensus        84 ~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~---~~~~~kl~d~g~~~~  156 (337)
T cd07852          84 IYLVFEYME-TDLHAVIRA---NILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLN---SDCRVKLADFGLARS  156 (337)
T ss_pred             EEEEecccc-cCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCcEEEeeccchhc
Confidence            468999997 599887743   2789999999999999999999999999999999999998   578999999999876


Q ss_pred             ccCCC------cccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCC-----
Q 014171          119 IKPGK------KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD-----  185 (429)
Q Consensus       119 ~~~~~------~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~-----  185 (429)
                      .....      ......|++.|+|||.+.+  ..+.++|+||+|+++|+|++|+.||.+.........+......     
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~  236 (337)
T cd07852         157 LSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAED  236 (337)
T ss_pred             cccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHH
Confidence            54322      2233467889999998753  3578999999999999999999999876655443333222110     


Q ss_pred             ----------------------CCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          186 ----------------------FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       186 ----------------------~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                                            ......+.++.++.++|.+||+.+|.+|||+.++++|||++....
T Consensus       237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~~~  303 (337)
T cd07852         237 IESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQFHN  303 (337)
T ss_pred             HHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhhcc
Confidence                                  011122447889999999999999999999999999999987644

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.97  E-value=2.2e-29  Score=238.81  Aligned_cols=179  Identities=22%  Similarity=0.267  Sum_probs=146.5

Q ss_pred             cceeEeeecCCCChHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecC
Q 014171           38 RKLRRIRLCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK  103 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~  103 (429)
                      ..|+||||+.+|+|.+++.+.+              ...++...+..++.||+.||.|||++|++||||||+||+++   
T Consensus        95 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nili~---  171 (304)
T cd05101          95 PLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAARNVLVT---  171 (304)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeecccccceEEEc---
Confidence            3578999999999999997642              23578889999999999999999999999999999999998   


Q ss_pred             CCCCEEEeecccceeccCCCc---ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHH
Q 014171          104 EDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE  178 (429)
Q Consensus       104 ~~~~~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~  178 (429)
                      .++.+||+|||.+........   .....+++.|+|||++.+ .++.++||||+|+++|+|++ |..||.+.+..+....
T Consensus       172 ~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~  251 (304)
T cd05101         172 ENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL  251 (304)
T ss_pred             CCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHH
Confidence            578999999999987643222   122345678999998864 46889999999999999998 8899988887777776


Q ss_pred             HHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          179 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       179 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      +.......   ....++..+++++.+||..+|.+|||+.++++.
T Consensus       252 ~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~  292 (304)
T cd05101         252 LKEGHRMD---KPANCTNELYMMMRDCWHAIPSHRPTFKQLVED  292 (304)
T ss_pred             HHcCCcCC---CCCCCCHHHHHHHHHHcccChhhCCCHHHHHHH
Confidence            65443221   224578999999999999999999999999854

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.97  E-value=2.2e-29  Score=234.06  Aligned_cols=177  Identities=23%  Similarity=0.341  Sum_probs=145.7

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .++||||+.+|+|.+++.... +.+++..+..++.|++.||.|||++||+|+||||+||+++   .++.++|+|||++..
T Consensus        80 ~~iv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~---~~~~~~l~dfg~~~~  155 (266)
T cd05033          80 VMIITEYMENGSLDKFLREND-GKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVN---SNLVCKVSDFGLSRR  155 (266)
T ss_pred             eEEEEEcCCCCCHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEc---CCCCEEECccchhhc
Confidence            468999999999999986543 5789999999999999999999999999999999999998   578899999999987


Q ss_pred             ccC-CCcc--cccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          119 IKP-GKKF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       119 ~~~-~~~~--~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      ... ....  ....++..|+|||.+.+ .++.++|+||+|+++|+|++ |..||...........+......   +....
T Consensus       156 ~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~  232 (266)
T cd05033         156 LEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRL---PPPMD  232 (266)
T ss_pred             ccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCC---CCCCC
Confidence            642 1111  12234568999998864 45889999999999999998 99999887777776666544221   12245


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      ++..+.+++.+||+.+|++||++.+++++
T Consensus       233 ~~~~l~~li~~cl~~~p~~Rp~~~ei~~~  261 (266)
T cd05033         233 CPSALYQLMLDCWQKDRNERPTFSQIVST  261 (266)
T ss_pred             CCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            78999999999999999999999998753

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.97  E-value=2.6e-29  Score=232.11  Aligned_cols=177  Identities=22%  Similarity=0.264  Sum_probs=146.1

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+||||+.+|+|.+++.......+++..+..++.|++.||.|||++|++|+||||+||+++   .++.++|+|||.+
T Consensus        73 ~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~---~~~~~~l~d~g~~  149 (256)
T cd05039          73 NPLYIVTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVS---EDLVAKVSDFGLA  149 (256)
T ss_pred             CCeEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEe---CCCCEEEcccccc
Confidence            3457899999999999999766545799999999999999999999999999999999999998   5788999999998


Q ss_pred             eeccCCCcccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      ........  ...++..|+|||.+. +.++.++|+||+|+++|++++ |..||...+.......+.....   ......+
T Consensus       150 ~~~~~~~~--~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~  224 (256)
T cd05039         150 KEASQGQD--SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHVEKGYR---MEAPEGC  224 (256)
T ss_pred             cccccccc--cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhcCCC---CCCccCC
Confidence            87643222  233456799999886 455889999999999999997 9999988777666655554322   1222457


Q ss_pred             CHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ++.+.++|.+||..+|.+|||+.++++
T Consensus       225 ~~~~~~li~~~l~~~p~~Rp~~~~l~~  251 (256)
T cd05039         225 PPEVYKVMKDCWELDPAKRPTFKQLRE  251 (256)
T ss_pred             CHHHHHHHHHHhccChhhCcCHHHHHH
Confidence            899999999999999999999999874

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.97  E-value=2.1e-29  Score=235.40  Aligned_cols=177  Identities=18%  Similarity=0.199  Sum_probs=138.9

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecC----CCCCEEEee
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK----EDSSLKATD  112 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~----~~~~~kL~D  112 (429)
                      ...|+|||||.+|+|..++.+. .+.+++..+..++.||+.||.|||++||+||||||+||+++..+    ....++++|
T Consensus        89 ~~~~lv~ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d  167 (274)
T cd05076          89 SENIMVEEFVEHGPLDVCLRKE-KGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSD  167 (274)
T ss_pred             CceEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcccCccceeeecC
Confidence            3457899999999998887543 36789999999999999999999999999999999999998421    123589999


Q ss_pred             cccceeccCCCcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHh-hCCCCCCCCChhHHHHHHHhcCCCCCCC
Q 014171          113 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILL-CGRRPFWDKTEDGIFKEVLRNKPDFRRK  189 (429)
Q Consensus       113 fg~a~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~-~g~~pf~~~~~~~~~~~i~~~~~~~~~~  189 (429)
                      ||.+......   ....++..|+|||.+.+  .++.++|+||+||++|+++ +|+.||.+......... .......+  
T Consensus       168 ~g~~~~~~~~---~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~-~~~~~~~~--  241 (274)
T cd05076         168 PGVSFTALSR---EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSEKERF-YEKKHRLP--  241 (274)
T ss_pred             Cccccccccc---cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHHHHHH-HHhccCCC--
Confidence            9987644222   22356788999998864  3588999999999999985 69999987765544332 22222222  


Q ss_pred             CCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          190 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       190 ~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                        ...++.+.++|.+||+.+|.+|||+.+++++
T Consensus       242 --~~~~~~~~~li~~cl~~~p~~Rps~~~il~~  272 (274)
T cd05076         242 --EPSCKELATLISQCLTYEPTQRPSFRTILRD  272 (274)
T ss_pred             --CCCChHHHHHHHHHcccChhhCcCHHHHHHh
Confidence              2346789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.97  E-value=2.9e-29  Score=230.96  Aligned_cols=177  Identities=21%  Similarity=0.250  Sum_probs=144.3

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..++||||+.+|+|.+++... ...+++..+..++.|++.||.|||++|++||||+|+||+++   .++.++|+|||++.
T Consensus        66 ~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~---~~~~~~l~d~g~~~  141 (250)
T cd05085          66 PIYIVMELVPGGDFLSFLRKK-KDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVG---ENNVLKISDFGMSR  141 (250)
T ss_pred             ccEEEEECCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEc---CCCeEEECCCccce
Confidence            457899999999999988544 35689999999999999999999999999999999999998   57789999999987


Q ss_pred             eccCCCccc--ccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          118 FIKPGKKFQ--DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       118 ~~~~~~~~~--~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      .........  ...++..|+|||.+.+ .++.++|+||+|+++|++++ |..||.+.........+.....   ......
T Consensus       142 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~  218 (250)
T cd05085         142 QEDDGIYSSSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKGYR---MSCPQK  218 (250)
T ss_pred             eccccccccCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCC---CCCCCC
Confidence            654322211  1233567999999864 45889999999999999998 9999988777666665554322   122345


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ++..+.+++.+||+.+|.+||++.++++
T Consensus       219 ~~~~~~~li~~~l~~~p~~Rp~~~~l~~  246 (250)
T cd05085         219 CPDDVYKVMQRCWDYKPENRPKFSELQK  246 (250)
T ss_pred             CCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            7899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.97  E-value=2.9e-29  Score=233.67  Aligned_cols=179  Identities=18%  Similarity=0.297  Sum_probs=138.5

Q ss_pred             ceeEeeecCCCChHHHHHhhcC---CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           39 KLRRIRLCEGGELLDRILAKKD---SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~---~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      .++||||+++|+|.+++...+.   ...++..+..++.|++.||.|||++|++|+||||+||+++   .++.++|+|||.
T Consensus        70 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~---~~~~~kL~dfg~  146 (269)
T cd05087          70 YLLVMEFCPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLT---ADLTVKIGDYGL  146 (269)
T ss_pred             cEEEEECCCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEc---CCCcEEECCccc
Confidence            4689999999999999865432   2467778889999999999999999999999999999998   478899999999


Q ss_pred             ceeccCCCc---ccccccCCcccccccccC--------CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhc-
Q 014171          116 SDFIKPGKK---FQDIVGSAYYVAPEVLKR--------KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRN-  182 (429)
Q Consensus       116 a~~~~~~~~---~~~~~g~~~y~aPE~~~~--------~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~-  182 (429)
                      +........   .....++..|+|||++.+        .++.++|+||+|+++|+|++ |..||............... 
T Consensus       147 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~  226 (269)
T cd05087         147 SHNKYKEDYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVLTYTVREQ  226 (269)
T ss_pred             cccccCcceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHHHHHhhcc
Confidence            865432221   123456788999998853        23678999999999999996 99999776665554433322 


Q ss_pred             CCCCCCCC-CCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          183 KPDFRRKP-WPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       183 ~~~~~~~~-~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ....+.+. ....+..+.+++.+|| .+|.+|||+++++.
T Consensus       227 ~~~~~~~~~~~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~  265 (269)
T cd05087         227 QLKLPKPRLKLPLSDRWYEVMQFCW-LQPEQRPSAEEVHL  265 (269)
T ss_pred             cCCCCCCccCCCCChHHHHHHHHHh-cCcccCCCHHHHHH
Confidence            22222222 1246788999999999 68999999999874

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]

Probab=99.97  E-value=1.9e-30  Score=248.69  Aligned_cols=199  Identities=25%  Similarity=0.365  Sum_probs=161.5

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH   85 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~   85 (429)
                      ++..||.|++-+.+.+..     .+.        .+|+.+|+|-+|+.+++-.+ ..|.....+.|++||+.|+.|||.+
T Consensus       442 lkkTRH~NIlLFMG~~~~-----p~~--------AIiTqwCeGsSLY~hlHv~e-tkfdm~~~idIAqQiaqGM~YLHAK  507 (678)
T KOG0193|consen  442 LKKTRHENILLFMGACMN-----PPL--------AIITQWCEGSSLYTHLHVQE-TKFDMNTTIDIAQQIAQGMDYLHAK  507 (678)
T ss_pred             HhhcchhhheeeehhhcC-----Cce--------eeeehhccCchhhhhccchh-hhhhHHHHHHHHHHHHHhhhhhhhh
Confidence            457788888887776653     111        35778999999999997654 7799999999999999999999999


Q ss_pred             CCeecCCCCCcEEEeecCCCCCEEEeecccceecc---CCCcccccccCCccccccccc----CCCCCCcchHHHHHHHH
Q 014171           86 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK---PGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITY  158 (429)
Q Consensus        86 ~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~---~~~~~~~~~g~~~y~aPE~~~----~~~~~~~DiwslG~il~  158 (429)
                      +|+|||||..||++.   +++.|||+|||++..-.   .........|...|+|||++.    .+++..+||||||+++|
T Consensus       508 ~IIHrDLKSnNIFl~---~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~Y  584 (678)
T KOG0193|consen  508 NIIHRDLKSNNIFLH---EDLKVKIGDFGLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWY  584 (678)
T ss_pred             hhhhhhccccceEEc---cCCcEEEecccceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHH
Confidence            999999999999999   56999999999986432   222334557888999999985    35799999999999999


Q ss_pred             HHhhCCCCCCCCChhHHHHHHHhcCCCCCC-CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          159 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRR-KPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       159 ~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ||++|..||.....+.++-.+-++...... ....+.+.++++|+..||..++++||.+.++|.
T Consensus       585 ELltg~lPysi~~~dqIifmVGrG~l~pd~s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~  648 (678)
T KOG0193|consen  585 ELLTGELPYSIQNRDQIIFMVGRGYLMPDLSKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLS  648 (678)
T ss_pred             HHHhCcCCcCCCChhheEEEecccccCccchhhhccCHHHHHHHHHHHHhcCcccCccHHHHHH
Confidence            999999999977777777666666332221 223456779999999999999999999998875

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.96  E-value=4.1e-29  Score=238.37  Aligned_cols=184  Identities=26%  Similarity=0.412  Sum_probs=150.8

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||. |+|.+.+... ...+++.++..++.|++.||.|||++||+||||+|+||+++   ..+.++|+|||++
T Consensus        98 ~~~~lv~e~~~-g~l~~~~~~~-~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~---~~~~~kl~dfg~~  172 (317)
T cd06635          98 HTAWLVMEYCL-GSASDLLEVH-KKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLT---EPGQVKLADFGSA  172 (317)
T ss_pred             CeEEEEEeCCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEEC---CCCCEEEecCCCc
Confidence            34578999997 5888777544 35799999999999999999999999999999999999998   4788999999988


Q ss_pred             eeccCCCcccccccCCccccccccc----CCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCC
Q 014171          117 DFIKPGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP  192 (429)
Q Consensus       117 ~~~~~~~~~~~~~g~~~y~aPE~~~----~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  192 (429)
                      ......   ....+++.|+|||.+.    +..+.++|+||+||++|+|++|+.||.+.........+.......  ....
T Consensus       173 ~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~  247 (317)
T cd06635         173 SIASPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPT--LQSN  247 (317)
T ss_pred             cccCCc---ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhccCCC--CCCc
Confidence            654322   3446888999999873    345889999999999999999999998877666666655543221  1223


Q ss_pred             CCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          193 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       193 ~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                      ..+..+++++.+||+.+|.+||++.++++|+|+.....
T Consensus       248 ~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~~~~~~  285 (317)
T cd06635         248 EWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFVLRERP  285 (317)
T ss_pred             cccHHHHHHHHHHccCCcccCcCHHHHHhChhhhccCc
Confidence            56788999999999999999999999999999977543

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=3.3e-29  Score=232.60  Aligned_cols=179  Identities=26%  Similarity=0.430  Sum_probs=146.8

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .++|+||+.|++|.+++.+.  +.+++..+..++.|++.||.|||++|++|+||+|+||+++   .++.++|+|||++..
T Consensus        81 ~~~v~e~~~~~~L~~~~~~~--~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~---~~~~~~l~dfg~~~~  155 (264)
T cd06653          81 LSIFVEYMPGGSIKDQLKAY--GALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRD---SAGNVKLGDFGASKR  155 (264)
T ss_pred             EEEEEEeCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEc---CCCCEEECccccccc
Confidence            46799999999999998654  5689999999999999999999999999999999999998   477899999999876


Q ss_pred             ccCC----CcccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          119 IKPG----KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       119 ~~~~----~~~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      ....    .......++..|+|||.+.+. .+.++|+||+||++|++++|+.||...........+.....  .+..+..
T Consensus       156 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~--~~~~p~~  233 (264)
T cd06653         156 IQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMAAIFKIATQPT--KPMLPDG  233 (264)
T ss_pred             cccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHHHHHHHHcCCC--CCCCCcc
Confidence            5321    112235688899999998653 57899999999999999999999987655555444443221  2223456


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                      +++.+.++|.+||. +|..||++.+++.|||.
T Consensus       234 ~~~~~~~~i~~~l~-~~~~r~~~~~~~~~~~~  264 (264)
T cd06653         234 VSDACRDFLKQIFV-EEKRRPTAEFLLRHPFV  264 (264)
T ss_pred             cCHHHHHHHHHHhc-CcccCccHHHHhcCCCC
Confidence            88999999999999 57999999999999984

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.96  E-value=2.5e-29  Score=236.78  Aligned_cols=177  Identities=23%  Similarity=0.250  Sum_probs=143.2

Q ss_pred             cceeEeeecCCCChHHHHHhhc----------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCC
Q 014171           38 RKLRRIRLCEGGELLDRILAKK----------------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPE   95 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~----------------------~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~   95 (429)
                      ..|+|+|||.+|+|.+++...+                      ...+++..+..++.|++.||.|||++|++||||||+
T Consensus        77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~  156 (290)
T cd05045          77 PLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAAR  156 (290)
T ss_pred             CcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhh
Confidence            3578999999999999886431                      135789999999999999999999999999999999


Q ss_pred             cEEEeecCCCCCEEEeecccceeccCCCc---ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCC
Q 014171           96 NFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDK  170 (429)
Q Consensus        96 Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~  170 (429)
                      ||+++   .++.++|+|||++........   .....++..|+|||.+.+ .++.++||||+|+++|+|++ |..||.+.
T Consensus       157 nill~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~  233 (290)
T cd05045         157 NVLVA---EGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI  233 (290)
T ss_pred             eEEEc---CCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCC
Confidence            99998   478899999999876533221   122244678999998754 45889999999999999998 99999888


Q ss_pred             ChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHh
Q 014171          171 TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL  220 (429)
Q Consensus       171 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l  220 (429)
                      ........+....   .......++.++++++.+||+.+|.+||++.+++
T Consensus       234 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~  280 (290)
T cd05045         234 APERLFNLLKTGY---RMERPENCSEEMYNLMLTCWKQEPDKRPTFADIS  280 (290)
T ss_pred             CHHHHHHHHhCCC---CCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHH
Confidence            7777666554332   1222346789999999999999999999999986

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.96  E-value=2.8e-29  Score=233.57  Aligned_cols=180  Identities=22%  Similarity=0.318  Sum_probs=143.2

Q ss_pred             ceeEeeecCCCChHHHHHhhc-----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecC--CCCCEEEe
Q 014171           39 KLRRIRLCEGGELLDRILAKK-----DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK--EDSSLKAT  111 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~-----~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~--~~~~~kL~  111 (429)
                      .|+||||++||+|.+++.+..     ...+++..+..++.|++.||.|||+.+++|+||+|+||+++...  ....++|+
T Consensus        74 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~  153 (269)
T cd05044          74 QYIIMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIG  153 (269)
T ss_pred             eEEEEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEEC
Confidence            578999999999999997542     23478999999999999999999999999999999999998522  12379999


Q ss_pred             ecccceeccCCCc---ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCC
Q 014171          112 DFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDF  186 (429)
Q Consensus       112 Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~  186 (429)
                      |||++........   .....++..|+|||.+.+ ..+.++||||+||++|+|++ |+.||...+.......+..+..  
T Consensus       154 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~--  231 (269)
T cd05044         154 DFGLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHVTAGGR--  231 (269)
T ss_pred             CcccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHHhcCCc--
Confidence            9999876533221   122345678999998864 45889999999999999998 9999987776666555543321  


Q ss_pred             CCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          187 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       187 ~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                       ......++..+.++|.+||+.+|.+||+++++++
T Consensus       232 -~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  265 (269)
T cd05044         232 -LQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQE  265 (269)
T ss_pred             -cCCcccchHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence             1223457899999999999999999999999864

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.96  E-value=3.4e-29  Score=232.14  Aligned_cols=176  Identities=23%  Similarity=0.240  Sum_probs=140.1

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|+||+.+|+|.+++.+. ...+++..+..++.|++.||.|||+.|++||||||+||+++   .++.+||+|||++..
T Consensus        72 ~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~---~~~~~kl~dfg~~~~  147 (262)
T cd05058          72 PLVVLPYMKHGDLRNFIRSE-THNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLD---ESFTVKVADFGLARD  147 (262)
T ss_pred             cEEEEecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc---CCCcEEECCcccccc
Confidence            56899999999999998654 24567888899999999999999999999999999999998   477899999999876


Q ss_pred             ccCCCc-----ccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhhC-CCCCCCCChhHHHHHHHhcCCCCCCCCC
Q 014171          119 IKPGKK-----FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCG-RRPFWDKTEDGIFKEVLRNKPDFRRKPW  191 (429)
Q Consensus       119 ~~~~~~-----~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~  191 (429)
                      ......     .....++..|+|||.+. ..++.++||||+||++|+|++| .+||...........+..+...   ...
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  224 (262)
T cd05058         148 IYDKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYLLQGRRL---LQP  224 (262)
T ss_pred             ccCCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCC---CCC
Confidence            543211     12334567899999875 4568899999999999999995 6667666666655555444321   112


Q ss_pred             CCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          192 PSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       192 ~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ..++..+.+++.+||..+|++||++.++++
T Consensus       225 ~~~~~~~~~li~~cl~~~p~~Rp~~~~il~  254 (262)
T cd05058         225 EYCPDPLYEVMLSCWHPKPEMRPTFSELVS  254 (262)
T ss_pred             CcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            346889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.96  E-value=2.7e-29  Score=246.03  Aligned_cols=155  Identities=21%  Similarity=0.261  Sum_probs=123.2

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc---ccccccCCcccccc
Q 014171           62 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPE  138 (429)
Q Consensus        62 ~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE  138 (429)
                      .+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++........   .....+++.|+|||
T Consensus       233 ~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp~Nill~---~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE  309 (400)
T cd05105         233 GLTTLDLLSFTYQVARGMEFLASKNCVHRDLAARNVLLA---QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPE  309 (400)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHhEEEe---CCCEEEEEeCCcceeccccccccccCCcCCCcceEChh
Confidence            478888999999999999999999999999999999998   477899999999876543221   12335677899999


Q ss_pred             cccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCH
Q 014171          139 VLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA  216 (429)
Q Consensus       139 ~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~  216 (429)
                      .+.+ .++.++||||+||++|+|++ |..||...................  .....++..+.+++.+||+.+|++||++
T Consensus       310 ~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPt~  387 (400)
T cd05105         310 SIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDSTFYNKIKSGYRM--AKPDHATQEVYDIMVKCWNSEPEKRPSF  387 (400)
T ss_pred             hhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHHHHHHHhcCCCC--CCCccCCHHHHHHHHHHCccCHhHCcCH
Confidence            8864 46889999999999999997 999997765444333333332222  2234678999999999999999999999


Q ss_pred             HHHhC
Q 014171          217 AQALS  221 (429)
Q Consensus       217 ~e~l~  221 (429)
                      .++.+
T Consensus       388 ~~l~~  392 (400)
T cd05105         388 LHLSD  392 (400)
T ss_pred             HHHHH
Confidence            88764

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.96  E-value=3.3e-29  Score=238.70  Aligned_cols=178  Identities=21%  Similarity=0.276  Sum_probs=144.8

Q ss_pred             cceeEeeecCCCChHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecC
Q 014171           38 RKLRRIRLCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK  103 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~  103 (429)
                      ..|+||||+.+|+|.+++....              ...+++.++..++.|++.||.|||++|++||||||+||+++   
T Consensus        92 ~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~---  168 (314)
T cd05099          92 PLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARNVLVT---  168 (314)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeeccccceeEEEc---
Confidence            3578999999999999996642              24588999999999999999999999999999999999998   


Q ss_pred             CCCCEEEeecccceeccCCCc---ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHH
Q 014171          104 EDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE  178 (429)
Q Consensus       104 ~~~~~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~  178 (429)
                      .++.+||+|||.++.......   .....++..|+|||.+.+ .++.++|+||+||++|+|++ |..||.+.+.......
T Consensus       169 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~  248 (314)
T cd05099         169 EDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKL  248 (314)
T ss_pred             CCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            578899999999976543221   112234467999998864 45889999999999999999 8999988877777766


Q ss_pred             HHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          179 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       179 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      +.....   ......++.++++++.+||+.+|.+|||+.++++
T Consensus       249 ~~~~~~---~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~  288 (314)
T cd05099         249 LREGHR---MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVE  288 (314)
T ss_pred             HHcCCC---CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            654432   1122467889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.96  E-value=3.8e-29  Score=232.66  Aligned_cols=177  Identities=20%  Similarity=0.316  Sum_probs=144.3

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+||||+.+|+|.+++... .+.+++.++..++.|++.||.|||+.|++|+||||+||+++   .++.++|+|||++.
T Consensus        80 ~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~---~~~~~kl~dfg~~~  155 (268)
T cd05063          80 PAMIITEYMENGALDKYLRDH-DGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVN---SNLECKVSDFGLSR  155 (268)
T ss_pred             CcEEEEEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEc---CCCcEEECCCccce
Confidence            357899999999999988653 36789999999999999999999999999999999999998   47889999999987


Q ss_pred             eccCCCcc--c--ccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCC
Q 014171          118 FIKPGKKF--Q--DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPW  191 (429)
Q Consensus       118 ~~~~~~~~--~--~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  191 (429)
                      ........  .  ....+..|+|||.+.. .++.++|+||+||++|+|++ |+.||...+..+....+....   ..+..
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~---~~~~~  232 (268)
T cd05063         156 VLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSNHEVMKAINDGF---RLPAP  232 (268)
T ss_pred             ecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCC---CCCCC
Confidence            65432211  1  1123457999998864 45889999999999999997 999998887777766665432   22222


Q ss_pred             CCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          192 PSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       192 ~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ..++..+.+++.+||..+|.+||++.++++
T Consensus       233 ~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~  262 (268)
T cd05063         233 MDCPSAVYQLMLQCWQQDRARRPRFVDIVN  262 (268)
T ss_pred             CCCCHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence            357889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.96  E-value=3.3e-29  Score=231.60  Aligned_cols=175  Identities=15%  Similarity=0.142  Sum_probs=137.4

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecC----CCCCEEEeec
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK----EDSSLKATDF  113 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~----~~~~~kL~Df  113 (429)
                      ..++|||||.+|+|.+++.... ..+++..+..++.||+.||.|||++||+||||||+||+++...    ....++|+||
T Consensus        74 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Df  152 (259)
T cd05037          74 ENIMVEEYVKFGPLDVFLHREK-NNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDP  152 (259)
T ss_pred             CcEEEEEcCCCCcHHHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCC
Confidence            4578999999999999886653 3789999999999999999999999999999999999998522    1126999999


Q ss_pred             ccceeccCCCcccccccCCcccccccccCC---CCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCC
Q 014171          114 GLSDFIKPGKKFQDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRK  189 (429)
Q Consensus       114 g~a~~~~~~~~~~~~~g~~~y~aPE~~~~~---~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~  189 (429)
                      |++.....   .....++..|+|||.+.+.   ++.++|+||+||++|+|++ |..||...+......... .....+. 
T Consensus       153 g~a~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~~~~~~~~-~~~~~~~-  227 (259)
T cd05037         153 GIPITVLS---REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSSEKERFYQ-DQHRLPM-  227 (259)
T ss_pred             Cccccccc---ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCchhHHHHHh-cCCCCCC-
Confidence            99876543   2234567789999998654   5889999999999999999 577776665433333222 1111111 


Q ss_pred             CCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          190 PWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       190 ~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                         .....+.+++.+||..+|.+|||+.++++
T Consensus       228 ---~~~~~~~~li~~~l~~~p~~Rpt~~~il~  256 (259)
T cd05037         228 ---PDCAELANLINQCWTYDPTKRPSFRAILR  256 (259)
T ss_pred             ---CCchHHHHHHHHHhccChhhCCCHHHHHH
Confidence               12478999999999999999999999885

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.96  E-value=3e-29  Score=235.35  Aligned_cols=175  Identities=23%  Similarity=0.267  Sum_probs=136.6

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+||||+.+|+|.+++...   .+++.++..++.|++.||.|||++||+||||||+||+++   .++.++|+|||++..
T Consensus        83 ~~lv~e~~~~~~l~~~~~~~---~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~~l~dfg~~~~  156 (283)
T cd05080          83 LQLIMEYVPLGSLRDYLPKH---KLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLD---NDRLVKIGDFGLAKA  156 (283)
T ss_pred             EEEEecCCCCCCHHHHHHHc---CCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEc---CCCcEEEeecccccc
Confidence            46899999999999988543   599999999999999999999999999999999999998   478899999999876


Q ss_pred             ccCCCc----ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChh--HH------------HHHH
Q 014171          119 IKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED--GI------------FKEV  179 (429)
Q Consensus       119 ~~~~~~----~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~------------~~~i  179 (429)
                      ......    .....++..|+|||.+.+ ..+.++||||+|+++|+|++|..||......  ..            ....
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (283)
T cd05080         157 VPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIEL  236 (283)
T ss_pred             cCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhh
Confidence            643322    112245667999998864 4588999999999999999999998543321  00            0011


Q ss_pred             HhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          180 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      .....  ..+....++..+.+++.+||+.+|++|||++++++
T Consensus       237 ~~~~~--~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~  276 (283)
T cd05080         237 LERGM--RLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIP  276 (283)
T ss_pred             hhcCC--CCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            11111  11122457889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.96  E-value=2e-29  Score=239.45  Aligned_cols=179  Identities=22%  Similarity=0.287  Sum_probs=144.1

Q ss_pred             cceeEeeecCCCChHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecC
Q 014171           38 RKLRRIRLCEGGELLDRILAKKD--------------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK  103 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~--------------~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~  103 (429)
                      ..|+|||||.+|+|.+++...+.              ..+++.++..++.|++.||+|||++|++||||||+||+++   
T Consensus        98 ~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~Nill~---  174 (307)
T cd05098          98 PLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---  174 (307)
T ss_pred             ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCcccccccHHheEEc---
Confidence            35789999999999999976432              3588999999999999999999999999999999999998   


Q ss_pred             CCCCEEEeecccceeccCCCcc---cccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHH
Q 014171          104 EDSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE  178 (429)
Q Consensus       104 ~~~~~kL~Dfg~a~~~~~~~~~---~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~  178 (429)
                      .++.++|+|||.+.........   ....+++.|+|||.+.+ .++.++|+||+||++|+|++ |..||.+.........
T Consensus       175 ~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~  254 (307)
T cd05098         175 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL  254 (307)
T ss_pred             CCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHH
Confidence            4788999999998765432211   11223468999998864 45889999999999999998 8899987776666655


Q ss_pred             HHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          179 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       179 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      +.....   ......++.++.+++.+||..+|.+|||+.+++++
T Consensus       255 ~~~~~~---~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~  295 (307)
T cd05098         255 LKEGHR---MDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  295 (307)
T ss_pred             HHcCCC---CCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            544332   12234578999999999999999999999999753

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.96  E-value=4.8e-29  Score=232.30  Aligned_cols=177  Identities=21%  Similarity=0.281  Sum_probs=144.8

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||++|+|.+++.+.. ..+++..+..++.|++.||.|||++|++|+||||+||+++   ..+.++|+|||++.
T Consensus        80 ~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~---~~~~~~l~d~g~~~  155 (270)
T cd05056          80 PVWIVMELAPLGELRSYLQVNK-YSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVS---SPDCVKLGDFGLSR  155 (270)
T ss_pred             CcEEEEEcCCCCcHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEe---cCCCeEEccCceee
Confidence            3478999999999999986542 4689999999999999999999999999999999999998   47789999999987


Q ss_pred             eccCCCcc--cccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          118 FIKPGKKF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       118 ~~~~~~~~--~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      ........  ....++..|+|||.+.. .++.++|+||+|+++|++++ |..||.+.+..+....+..+...   +.++.
T Consensus       156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~---~~~~~  232 (270)
T cd05056         156 YLEDESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNNDVIGRIENGERL---PMPPN  232 (270)
T ss_pred             ecccccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcC---CCCCC
Confidence            66433221  12233467999998864 45889999999999999986 99999888776666655544322   23356


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ++..+.+++.+||..+|.+|||+.+++.
T Consensus       233 ~~~~~~~li~~~l~~~P~~Rpt~~~~~~  260 (270)
T cd05056         233 CPPTLYSLMTKCWAYDPSKRPRFTELKA  260 (270)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            7899999999999999999999998874

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.96  E-value=4.4e-29  Score=235.68  Aligned_cols=181  Identities=17%  Similarity=0.185  Sum_probs=144.4

Q ss_pred             cceeEeeecCCCChHHHHHhhc---------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCE
Q 014171           38 RKLRRIRLCEGGELLDRILAKK---------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL  108 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~---------~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~  108 (429)
                      ..++|+||+.+|+|.+++....         ...+++..+..++.|++.||.|||++|++|+||||+||+++   ..+.+
T Consensus        93 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~Nili~---~~~~~  169 (296)
T cd05051          93 PLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATRNCLVG---KNYTI  169 (296)
T ss_pred             CcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchhceeec---CCCce
Confidence            4578999999999999986543         12689999999999999999999999999999999999999   46899


Q ss_pred             EEeecccceeccCCCc---ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh--CCCCCCCCChhHHHHHHHhc
Q 014171          109 KATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC--GRRPFWDKTEDGIFKEVLRN  182 (429)
Q Consensus       109 kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~--g~~pf~~~~~~~~~~~i~~~  182 (429)
                      +|+|||.+........   .....+++.|+|||.+.+ .++.++||||+||++|+|++  |..||...+....+..+...
T Consensus       170 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~~~  249 (296)
T cd05051         170 KIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAGHF  249 (296)
T ss_pred             EEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHHhc
Confidence            9999999876543321   123345678999998864 56899999999999999998  77888777666666555433


Q ss_pred             ----CCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          183 ----KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       183 ----~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                          .........+.++.++.+++.+||+.||.+|||+.++++
T Consensus       250 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~  292 (296)
T cd05051         250 FRDDGRQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHL  292 (296)
T ss_pred             cccccccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHH
Confidence                111111222456789999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.96  E-value=2.6e-29  Score=236.38  Aligned_cols=182  Identities=32%  Similarity=0.550  Sum_probs=146.6

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+||||+.+|+|.+++...  ..+++..+..++.|++.||.|||+.|++||||+|+||+++   .++.++|+|||++.
T Consensus        79 ~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~---~~~~~~l~dfg~~~  153 (288)
T cd05583          79 KLHLILDYVNGGELFTHLYQR--EHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLD---SEGHVVLTDFGLSK  153 (288)
T ss_pred             EEEEEEecCCCCcHHHHHhhc--CCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEEC---CCCCEEEEECcccc
Confidence            356899999999999988543  5799999999999999999999999999999999999998   46789999999987


Q ss_pred             eccCCCc--ccccccCCcccccccccCC---CCCCcchHHHHHHHHHHhhCCCCCCCCCh----hHHHHHHHhcCCCCCC
Q 014171          118 FIKPGKK--FQDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFKEVLRNKPDFRR  188 (429)
Q Consensus       118 ~~~~~~~--~~~~~g~~~y~aPE~~~~~---~~~~~DiwslG~il~~l~~g~~pf~~~~~----~~~~~~i~~~~~~~~~  188 (429)
                      .......  .....|+..|+|||.+.+.   .+.++|+||+|+++|+|++|..||.....    ......+.....    
T Consensus       154 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~----  229 (288)
T cd05583         154 EFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQNSQSEISRRILKSKP----  229 (288)
T ss_pred             ccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccchHHHHHHHHHccCC----
Confidence            6543221  2234678899999998643   47889999999999999999999964322    223333333322    


Q ss_pred             CCCCCCCHHHHHHHHHhccCCccCcCC---HHHHhCCCccccC
Q 014171          189 KPWPSISNSAKDFVKKLLVKDPRARLT---AAQALSHPWVREG  228 (429)
Q Consensus       189 ~~~~~~~~~~~~li~~~l~~dp~~R~s---~~e~l~h~~~~~~  228 (429)
                      +....++..++++|.+||+.+|++|||   +.++++||||+..
T Consensus       230 ~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~~~~~~~  272 (288)
T cd05583         230 PFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNHPFFQGI  272 (288)
T ss_pred             CCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcCcccccC
Confidence            223457889999999999999999998   5678999999875

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.96  E-value=3.9e-29  Score=240.12  Aligned_cols=185  Identities=28%  Similarity=0.397  Sum_probs=146.3

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+++||+. ++|.+.+...  ..+++..++.++.||+.||.|||++||+||||||+||+++   .++.++|+|||.+..
T Consensus        81 ~~~~~e~~~-~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~---~~~~~kl~Dfg~a~~  154 (332)
T cd07857          81 LYLYEELME-ADLHQIIRSG--QPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVN---ADCELKICDFGLARG  154 (332)
T ss_pred             EEEEEeccc-CCHHHHHhcC--CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEc---CCCCEEeCcCCCcee
Confidence            357888886 6899888543  6799999999999999999999999999999999999998   478899999999976


Q ss_pred             ccCCCc-----ccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCC-------
Q 014171          119 IKPGKK-----FQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP-------  184 (429)
Q Consensus       119 ~~~~~~-----~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~-------  184 (429)
                      ......     .....|++.|+|||.+.+  .++.++|+||+||++|+|++|++||.+.........+.....       
T Consensus       155 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  234 (332)
T cd07857         155 FSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEETL  234 (332)
T ss_pred             cccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence            543221     233468899999998754  458899999999999999999999977654443332221100       


Q ss_pred             ----------------CCC----CCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          185 ----------------DFR----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       185 ----------------~~~----~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                                      ..+    ...++..+..+++++.+||+.||.+|||+.+++.|||+++..
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~~~~~~~~  299 (332)
T cd07857         235 SRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEHPYLAIWH  299 (332)
T ss_pred             HhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcChhhhhhc
Confidence                            000    112244678999999999999999999999999999998653

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]

Probab=99.96  E-value=9.7e-30  Score=252.72  Aligned_cols=215  Identities=27%  Similarity=0.408  Sum_probs=176.2

Q ss_pred             eeecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH
Q 014171            4 ILIGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH   83 (429)
Q Consensus         4 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH   83 (429)
                      +++....|+|.....+++-...+       ..+...|||||||.||+.-+++..-++..+.|..++.|++.++.||.+||
T Consensus        68 il~~~~~hpnv~~fyg~~~k~~~-------~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH  140 (953)
T KOG0587|consen   68 MLKKYSHHPNVATFYGAFIKKDP-------GNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLH  140 (953)
T ss_pred             HHHhccCCCCcceEEEEEEEecC-------CCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHh
Confidence            34556678888777777665433       33455678999999999999998888889999999999999999999999


Q ss_pred             HCCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCC-cccccccCCcccccccccC------CCCCCcchHHHHHH
Q 014171           84 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR------KSGPESDVWSIGVI  156 (429)
Q Consensus        84 ~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~~~~------~~~~~~DiwslG~i  156 (429)
                      .+.++|||||-.|||++   .++.+||+|||.+..++.+. ...+.+|||.|||||++..      .|...+|+||||++
T Consensus       141 ~nkviHRDikG~NiLLT---~e~~VKLvDFGvSaQldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGIT  217 (953)
T KOG0587|consen  141 NNKVIHRDIKGQNVLLT---ENAEVKLVDFGVSAQLDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGIT  217 (953)
T ss_pred             hcceeeecccCceEEEe---ccCcEEEeeeeeeeeeecccccccCcCCCcccccceeeecccCCCCCcccccchhhccce
Confidence            99999999999999999   58999999999998887653 4577899999999999853      34678999999999


Q ss_pred             HHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          157 TYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       157 l~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      ..||..|.+|+.+.-+...+-.|..+.+.-. ..+..-+.++.++|..||..|..+||+..++|+|||+++..
T Consensus       218 aIEladG~PPl~DmHPmraLF~IpRNPPPkL-krp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~hpFi~e~~  289 (953)
T KOG0587|consen  218 AIEMAEGAPPLCDMHPMRALFLIPRNPPPKL-KRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKHPFITEQP  289 (953)
T ss_pred             eehhcCCCCCccCcchhhhhccCCCCCCccc-cchhhHHHHHHHHHHHHHhhccccCcchhhhccCCcccccc
Confidence            9999999999987766544433333322111 11334578899999999999999999999999999999543

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.96  E-value=6.3e-29  Score=230.20  Aligned_cols=177  Identities=19%  Similarity=0.243  Sum_probs=145.8

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+||||+.+|+|.+++.+..+..+++..+..++.|++.||.|||++|++|+||+|+||+++   ..+.++|+|||.+.
T Consensus        74 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~---~~~~~~l~d~~~~~  150 (260)
T cd05073          74 PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS---ASLVCKIADFGLAR  150 (260)
T ss_pred             CeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEc---CCCcEEECCCccee
Confidence            357899999999999999776666789999999999999999999999999999999999998   57899999999987


Q ss_pred             eccCCCcc--cccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          118 FIKPGKKF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       118 ~~~~~~~~--~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      ........  ....++..|+|||.+.. .++.++|+||+||++|++++ |..||.+.+.......+.....   .+....
T Consensus       151 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~  227 (260)
T cd05073         151 VIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR---MPRPEN  227 (260)
T ss_pred             eccCCCcccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCCCC---CCCccc
Confidence            65432221  22234567999999864 45889999999999999998 9999988777666665554422   122346


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHh
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQAL  220 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l  220 (429)
                      .+..+.+++.+||+.+|.+||++.+++
T Consensus       228 ~~~~~~~~i~~~l~~~p~~Rp~~~~l~  254 (260)
T cd05073         228 CPEELYNIMMRCWKNRPEERPTFEYIQ  254 (260)
T ss_pred             CCHHHHHHHHHHcccCcccCcCHHHHH
Confidence            789999999999999999999998876

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.96  E-value=6.4e-29  Score=230.11  Aligned_cols=177  Identities=23%  Similarity=0.284  Sum_probs=146.7

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..++||||+++|+|.+++....+..+++..+..++.|++.||.|||++|++|+||+|+||+++   .++.++|+|||.+.
T Consensus        75 ~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~---~~~~~~l~d~g~~~  151 (261)
T cd05034          75 PIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVG---ENLVCKIADFGLAR  151 (261)
T ss_pred             ceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEc---CCCCEEECccccce
Confidence            357899999999999999776556799999999999999999999999999999999999998   47899999999987


Q ss_pred             eccCCCcc--cccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          118 FIKPGKKF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       118 ~~~~~~~~--~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      ........  ....++..|+|||.+.+ ..+.++|+||+|+++|++++ |+.||.+.+.......+.....   .+....
T Consensus       152 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~  228 (261)
T cd05034         152 LIEDDEYTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNREVLEQVERGYR---MPRPPN  228 (261)
T ss_pred             eccchhhhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC---CCCCCC
Confidence            66432211  12234568999998874 45889999999999999998 9999988877777777665432   122235


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHh
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQAL  220 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l  220 (429)
                      .+.++.+++.+||+.+|.+||++++++
T Consensus       229 ~~~~~~~~i~~~l~~~p~~Rp~~~~l~  255 (261)
T cd05034         229 CPEELYDLMLQCWDKDPEERPTFEYLQ  255 (261)
T ss_pred             CCHHHHHHHHHHcccCcccCCCHHHHH
Confidence            688999999999999999999999886

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.96  E-value=7.3e-29  Score=228.99  Aligned_cols=179  Identities=22%  Similarity=0.322  Sum_probs=147.9

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+||||+.+|+|.+++.......+++..+..++.|++.||.|||+.|++|+||+|+||+++   .++.++|+|||.+
T Consensus        74 ~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~---~~~~~~l~dfg~~  150 (258)
T smart00219       74 EPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVG---ENLVVKISDFGLS  150 (258)
T ss_pred             CeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEc---cCCeEEEcccCCc
Confidence            3467899999999999998765433399999999999999999999999999999999999998   4678999999998


Q ss_pred             eeccCCCccc--ccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCC
Q 014171          117 DFIKPGKKFQ--DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWP  192 (429)
Q Consensus       117 ~~~~~~~~~~--~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  192 (429)
                      ..........  ...+++.|+|||.+.+ .++.++|+||+|+++++|++ |.+||...+.......+.......   ...
T Consensus       151 ~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~  227 (258)
T smart00219      151 RDLYDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMSNEEVLEYLKKGYRLP---KPE  227 (258)
T ss_pred             eecccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCCCC---CCC
Confidence            7765432222  1236788999998853 46889999999999999998 889988877777776666554322   224


Q ss_pred             CCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          193 SISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       193 ~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      .++..+.+++.+||..+|.+|||+.++++
T Consensus       228 ~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~  256 (258)
T smart00219      228 NCPPEIYKLMLQCWAEDPEDRPTFSELVE  256 (258)
T ss_pred             cCCHHHHHHHHHHCcCChhhCcCHHHHHh
Confidence            57899999999999999999999999885

Phosphotransferases. Tyrosine-specific kinase subfamily.

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.96  E-value=4.6e-29  Score=239.08  Aligned_cols=184  Identities=32%  Similarity=0.490  Sum_probs=144.3

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|+||+ +++|.+++..   ..+++..+..++.|+++||.|||+.||+||||+|+||+++   .++.++|+|||.+..
T Consensus        85 ~~lv~e~~-~~~L~~~~~~---~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~---~~~~~~l~dfg~~~~  157 (328)
T cd07856          85 IYFVTELL-GTDLHRLLTS---RPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILIN---ENCDLKICDFGLARI  157 (328)
T ss_pred             EEEEeehh-ccCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeEC---CCCCEEeCccccccc
Confidence            56899998 5788877642   4689999999999999999999999999999999999998   478899999999875


Q ss_pred             ccCCCcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhc--------------
Q 014171          119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN--------------  182 (429)
Q Consensus       119 ~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~--------------  182 (429)
                      ...  ......+++.|+|||.+.+  .++.++|+||+||++|+|++|+.||.+.........+...              
T Consensus       158 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  235 (328)
T cd07856         158 QDP--QMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVINTICS  235 (328)
T ss_pred             cCC--CcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhccc
Confidence            432  2234467889999998754  4588999999999999999999999776543322211110              


Q ss_pred             ---------CCC---CC-CCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCC
Q 014171          183 ---------KPD---FR-RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA  231 (429)
Q Consensus       183 ---------~~~---~~-~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~  231 (429)
                               ...   .+ ....+.++..++++|.+||+.+|.+|||+++++.||||.....+
T Consensus       236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~~~~~~~~~~  297 (328)
T cd07856         236 ENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAHPYLAPYHDP  297 (328)
T ss_pred             hhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCCccccccCC
Confidence                     000   00 01123578899999999999999999999999999999876543

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1.8e-29  Score=260.35  Aligned_cols=200  Identities=21%  Similarity=0.325  Sum_probs=167.1

Q ss_pred             eeecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhc-----CCCCCHHHHHHHHHHHHHH
Q 014171            4 ILIGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKK-----DSRYTEKDAAVVVRQMLRV   78 (429)
Q Consensus         4 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-----~~~l~~~~~~~i~~qil~a   78 (429)
                      .+|+.+.|+|++.++++.-.            ....++++|||+||+|+.+|.+.+     ...++......++.||+.|
T Consensus       747 ~~m~~f~HpNiv~liGv~l~------------~~~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G  814 (1025)
T KOG1095|consen  747 LLMSKFDHPNIVSLIGVCLD------------SGPPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKG  814 (1025)
T ss_pred             HHHhcCCCcceeeEEEeecC------------CCCcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhh
Confidence            46788899999998886543            233457899999999999997652     3568999999999999999


Q ss_pred             HHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccc--c-ccCCccccccccc-CCCCCCcchHHHH
Q 014171           79 AAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD--I-VGSAYYVAPEVLK-RKSGPESDVWSIG  154 (429)
Q Consensus        79 L~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~--~-~g~~~y~aPE~~~-~~~~~~~DiwslG  154 (429)
                      .+||+++++|||||...|+|++   ....+|++|||+|+.+.....+..  . .-...|||||.+. +.++.++||||||
T Consensus       815 ~~YLe~~~fvHRDLAaRNCLL~---~~r~VKIaDFGlArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFG  891 (1025)
T KOG1095|consen  815 MNYLESKHFVHRDLAARNCLLD---ERRVVKIADFGLARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFG  891 (1025)
T ss_pred             hHHHHhCCCcCcchhhhheeec---ccCcEEEcccchhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhH
Confidence            9999999999999999999999   468999999999995543322211  1 2235799999997 6779999999999


Q ss_pred             HHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          155 VITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       155 ~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      |++||++| |..||.+.+..++...+..+. ++++  ++.++..+.+++..||+.+|.+||++..+++
T Consensus       892 VllWEifslG~~PY~~~~n~~v~~~~~~gg-RL~~--P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~  956 (1025)
T KOG1095|consen  892 VLLWEIFSLGATPYPSRSNFEVLLDVLEGG-RLDP--PSYCPEKLYQLMLQCWKHDPEDRPSFRTIVE  956 (1025)
T ss_pred             HHHHHHHhCCCCCCCCcchHHHHHHHHhCC-ccCC--CCCCChHHHHHHHHHccCChhhCccHHHHHh
Confidence            99999998 899999999988888777766 4433  3568999999999999999999999999887

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.96  E-value=7.9e-29  Score=232.00  Aligned_cols=177  Identities=23%  Similarity=0.224  Sum_probs=145.2

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...++|+||+.+|+|.+++.+.. ..+++..+..++.||+.||.|||++|++||||||+||+++   ..+.++|+|||.+
T Consensus        81 ~~~~~v~e~~~~g~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~---~~~~~kL~dfg~~  156 (279)
T cd05057          81 SQVQLITQLMPLGCLLDYVRNHK-DNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVK---TPQHVKITDFGLA  156 (279)
T ss_pred             CceEEEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEc---CCCeEEECCCccc
Confidence            34578999999999999986553 4699999999999999999999999999999999999998   4778999999999


Q ss_pred             eeccCCCccc---ccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCC
Q 014171          117 DFIKPGKKFQ---DIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPW  191 (429)
Q Consensus       117 ~~~~~~~~~~---~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  191 (429)
                      ..........   ...++..|+|||.+. ..++.++|+||+|+++|++++ |+.||.+....+....+..+...   +..
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~  233 (279)
T cd05057         157 KLLDVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPAVEIPDLLEKGERL---PQP  233 (279)
T ss_pred             ccccCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhCCCCC---CCC
Confidence            8765332211   122356799999886 456889999999999999998 99999888777776666644321   222


Q ss_pred             CCCCHHHHHHHHHhccCCccCcCCHHHHh
Q 014171          192 PSISNSAKDFVKKLLVKDPRARLTAAQAL  220 (429)
Q Consensus       192 ~~~~~~~~~li~~~l~~dp~~R~s~~e~l  220 (429)
                      ...+..+.+++.+||..+|.+||++.+++
T Consensus       234 ~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~  262 (279)
T cd05057         234 PICTIDVYMVLVKCWMIDAESRPTFKELI  262 (279)
T ss_pred             CCCCHHHHHHHHHHcCCChhhCCCHHHHH
Confidence            34678999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.96  E-value=8.4e-29  Score=229.97  Aligned_cols=179  Identities=23%  Similarity=0.410  Sum_probs=142.4

Q ss_pred             cceeEeeecCCCChHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           38 RKLRRIRLCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      ..++||||+.||+|..++.+.  ....+++.++..++.|++.||.|||+.|++||||+|+||+++   .++.++|+|||.
T Consensus        76 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~---~~~~~~l~d~~~  152 (267)
T cd08224          76 ELNIVLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFIT---ATGVVKLGDLGL  152 (267)
T ss_pred             eEEEEEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEEC---CCCcEEEeccce
Confidence            357899999999999988643  235689999999999999999999999999999999999998   578899999999


Q ss_pred             ceeccCCC-cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCCh--hHHHHHHHhcCCCCCCCCC
Q 014171          116 SDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE--DGIFKEVLRNKPDFRRKPW  191 (429)
Q Consensus       116 a~~~~~~~-~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~~  191 (429)
                      +....... ......+++.|+|||.+.+ .++.++|+||+||++|+|++|+.||.....  ......+..+.  .++.+.
T Consensus       153 ~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~  230 (267)
T cd08224         153 GRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEKCD--YPPLPA  230 (267)
T ss_pred             eeeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCccHHHHHhhhhcCC--CCCCCh
Confidence            87654332 2234467889999998864 458899999999999999999999965432  22333333322  122222


Q ss_pred             CCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          192 PSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       192 ~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      +..+..++++|.+||..+|.+|||+.++++
T Consensus       231 ~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~  260 (267)
T cd08224         231 DHYSEELRDLVSRCINPDPEKRPDISYVLQ  260 (267)
T ss_pred             hhcCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence            357889999999999999999999998874

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.96  E-value=7.5e-29  Score=230.64  Aligned_cols=177  Identities=22%  Similarity=0.336  Sum_probs=144.6

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+||||++||+|.+++... .+.+++.++..++.|++.||.|||++|++||||||+||+++   .++.++|+|||.+.
T Consensus        79 ~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~---~~~~~~l~dfg~~~  154 (267)
T cd05066          79 PVMIVTEYMENGSLDAFLRKH-DGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVN---SNLVCKVSDFGLSR  154 (267)
T ss_pred             ccEEEEEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEEC---CCCeEEeCCCCccc
Confidence            357899999999999998654 35689999999999999999999999999999999999998   47889999999987


Q ss_pred             eccCCCcc----cccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCC
Q 014171          118 FIKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPW  191 (429)
Q Consensus       118 ~~~~~~~~----~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  191 (429)
                      ........    ....++..|+|||.+.+ .++.++|+||+|+++|++++ |..||......+....+.... ..  +..
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~-~~--~~~  231 (267)
T cd05066         155 VLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGY-RL--PAP  231 (267)
T ss_pred             ccccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCC-cC--CCC
Confidence            66432211    11223467999999874 56889999999999999886 999998887776666665442 22  223


Q ss_pred             CCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          192 PSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       192 ~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ..+++.+.+++.+||+.+|.+||++.++++
T Consensus       232 ~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  261 (267)
T cd05066         232 MDCPAALHQLMLDCWQKDRNERPKFEQIVS  261 (267)
T ss_pred             CCCCHHHHHHHHHHcccCchhCCCHHHHHH
Confidence            457889999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.96  E-value=8.2e-29  Score=231.29  Aligned_cols=179  Identities=18%  Similarity=0.321  Sum_probs=146.2

Q ss_pred             ceeEeeecCCCChHHHHHhhcCC-------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEe
Q 014171           39 KLRRIRLCEGGELLDRILAKKDS-------RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT  111 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~-------~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~  111 (429)
                      .|+|||||++|+|.+++......       .+++..+..++.|++.||.|||++||+||||||+||+++   ..+.++|+
T Consensus        83 ~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~---~~~~~~l~  159 (275)
T cd05046          83 HYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVS---SQREVKVS  159 (275)
T ss_pred             ceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEe---CCCcEEEc
Confidence            47899999999999999765421       689999999999999999999999999999999999998   47889999


Q ss_pred             ecccceeccCCC--cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCC
Q 014171          112 DFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFR  187 (429)
Q Consensus       112 Dfg~a~~~~~~~--~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~  187 (429)
                      |||++.......  ......+++.|+|||.+.+ ..+.++|+||+|+++|++++ |..||.+.........+........
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~~~~~~~~~  239 (275)
T cd05046         160 LLSLSKDVYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRLQAGKLELP  239 (275)
T ss_pred             ccccccccCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccchHHHHHHHHcCCcCCC
Confidence            999886543221  2233456778999998764 45788999999999999998 8889987777666666655443332


Q ss_pred             CCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          188 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       188 ~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      .  ...++..+.+++.+||+.+|.+|||+.+++..
T Consensus       240 ~--~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~  272 (275)
T cd05046         240 V--PEGCPSRLYKLMTRCWAVNPKDRPSFSELVSA  272 (275)
T ss_pred             C--CCCCCHHHHHHHHHHcCCCcccCCCHHHHHHH
Confidence            2  23578999999999999999999999998864

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.96  E-value=8.4e-29  Score=230.49  Aligned_cols=177  Identities=24%  Similarity=0.375  Sum_probs=143.3

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..++||||+.+|+|.+++... .+.+++.++..++.|++.||.|||++|++|+||||+||+++   .++.++|+|||.+.
T Consensus        79 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~---~~~~~kl~dfg~~~  154 (269)
T cd05065          79 PVMIITEFMENGALDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVN---SNLVCKVSDFGLSR  154 (269)
T ss_pred             ceEEEEecCCCCcHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEc---CCCcEEECCCcccc
Confidence            346899999999999988654 35789999999999999999999999999999999999998   47789999999987


Q ss_pred             eccCCCcc---cccc---cCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCC
Q 014171          118 FIKPGKKF---QDIV---GSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRK  189 (429)
Q Consensus       118 ~~~~~~~~---~~~~---g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~  189 (429)
                      ........   ....   .+..|+|||.+.+ .++.++||||+||++|++++ |..||...........+....   ..+
T Consensus       155 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~---~~~  231 (269)
T cd05065         155 FLEDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDY---RLP  231 (269)
T ss_pred             ccccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCC---cCC
Confidence            55432211   1111   1347999999864 45889999999999999886 999998887777766664332   222


Q ss_pred             CCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          190 PWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       190 ~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ..+.++..+.+++.+||+.+|.+||++.+++.
T Consensus       232 ~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~  263 (269)
T cd05065         232 PPMDCPTALHQLMLDCWQKDRNARPKFGQIVS  263 (269)
T ss_pred             CcccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            23467889999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.96  E-value=8.7e-29  Score=231.79  Aligned_cols=179  Identities=18%  Similarity=0.192  Sum_probs=145.2

Q ss_pred             ccceeEeeecCCCChHHHHHhhcC------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEE
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKD------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA  110 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~------~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL  110 (429)
                      ...+++++|+.+|+|.+++...+.      ..+++..+..++.|++.||.|||+++++|+||||+||+++   ..+.+||
T Consensus        82 ~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~---~~~~~kl  158 (280)
T cd05043          82 EPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVID---EELQVKI  158 (280)
T ss_pred             CCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEc---CCCcEEE
Confidence            345789999999999999865432      4589999999999999999999999999999999999998   4789999


Q ss_pred             eecccceeccCCCcc---cccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCC
Q 014171          111 TDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPD  185 (429)
Q Consensus       111 ~Dfg~a~~~~~~~~~---~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~  185 (429)
                      +|||+++.+......   ....++..|+|||.+.+ .++.++||||+||++|++++ |+.||......+....+..+. .
T Consensus       159 ~d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~-~  237 (280)
T cd05043         159 TDNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYLKDGY-R  237 (280)
T ss_pred             CCCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHHHcCC-C
Confidence            999999765433211   22345677999998864 45889999999999999999 999998777666555544432 1


Q ss_pred             CCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          186 FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       186 ~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      .  .....+++.+.+++.+||..+|++|||+.++++
T Consensus       238 ~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~  271 (280)
T cd05043         238 L--AQPINCPDELFAVMACCWALDPEERPSFSQLVQ  271 (280)
T ss_pred             C--CCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            1  223457899999999999999999999999873

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.96  E-value=9.6e-29  Score=232.52  Aligned_cols=178  Identities=19%  Similarity=0.235  Sum_probs=144.6

Q ss_pred             cceeEeeecCCCChHHHHHhhcC--------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcE
Q 014171           38 RKLRRIRLCEGGELLDRILAKKD--------------------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF   97 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~--------------------~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Ni   97 (429)
                      ..|+|+||+.+|+|.+++...+.                    ..+++..+..++.|++.||.|||++|++||||||+||
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~ni  161 (288)
T cd05050          82 PMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRNC  161 (288)
T ss_pred             ccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhhe
Confidence            35789999999999999964321                    2478889999999999999999999999999999999


Q ss_pred             EEeecCCCCCEEEeecccceeccCCCc---ccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh-CCCCCCCCCh
Q 014171           98 LFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTE  172 (429)
Q Consensus        98 l~~~~~~~~~~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~  172 (429)
                      +++   .++.++|+|||.+........   .....++..|+|||.+. +.++.++|+||+||++|+|++ |..||.+.+.
T Consensus       162 l~~---~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~  238 (288)
T cd05050         162 LVG---ENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH  238 (288)
T ss_pred             Eec---CCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH
Confidence            998   578899999999876543221   12233466799999876 456889999999999999997 8889988887


Q ss_pred             hHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          173 DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       173 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      .+....+..+...   ...+.++..+.+++.+||+.+|.+|||+.|+++
T Consensus       239 ~~~~~~~~~~~~~---~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~  284 (288)
T cd05050         239 EEVIYYVRDGNVL---SCPDNCPLELYNLMRLCWSKLPSDRPSFASINR  284 (288)
T ss_pred             HHHHHHHhcCCCC---CCCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            7777766654432   112357899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.96  E-value=9e-29  Score=230.24  Aligned_cols=180  Identities=28%  Similarity=0.449  Sum_probs=148.6

Q ss_pred             cceeEeeecCCCChHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEeecCCCCCEEEeecc
Q 014171           38 RKLRRIRLCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKATDFG  114 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~lH~-~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg  114 (429)
                      ..++||||++|++|.+++...  ....+++..+..++.|++.||.|||+ .|++|+||+|+||+++   ..+.++|+|||
T Consensus        83 ~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~---~~~~~~l~dfg  159 (269)
T cd08528          83 RLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLG---EDDKVTITDFG  159 (269)
T ss_pred             eEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEEC---CCCcEEEeccc
Confidence            357899999999999988542  34579999999999999999999996 7899999999999998   57889999999


Q ss_pred             cceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          115 LSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       115 ~a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      .+.............|+..|+|||.+.+ .++.++|+||+|+++|+|++|+.||...........+......  +.....
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~  237 (269)
T cd08528         160 LAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNMLSLATKIVEAVYE--PLPEGM  237 (269)
T ss_pred             ceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCHHHHHHHHhhccCC--cCCccc
Confidence            9987655444455678899999999875 3588999999999999999999999877666666555544332  112235


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      +++.+.++|.+||+.||++||++.++..+
T Consensus       238 ~~~~l~~li~~cl~~~p~~Rp~~~e~~~~  266 (269)
T cd08528         238 YSEDVTDVITSCLTPDAEARPDIIQVSAM  266 (269)
T ss_pred             CCHHHHHHHHHHCCCCCccCCCHHHHHHH
Confidence            78999999999999999999999998653

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.96  E-value=1.2e-28  Score=227.74  Aligned_cols=178  Identities=20%  Similarity=0.335  Sum_probs=144.8

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|+||+.+|+|.+++... .+.+++..+..++.|++.||.|||++|++|+||||+||+++   .++.++|+|||.+.
T Consensus        73 ~~~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~---~~~~~~l~d~g~~~  148 (256)
T cd05112          73 PICLVFEFMEHGCLSDYLRAQ-RGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVG---ENQVVKVSDFGMTR  148 (256)
T ss_pred             ceEEEEEcCCCCcHHHHHHhC-ccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEc---CCCeEEECCCccee
Confidence            357899999999999988654 35689999999999999999999999999999999999998   57789999999987


Q ss_pred             eccCCCc--ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          118 FIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       118 ~~~~~~~--~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      .......  .....++..|+|||.+.+ .++.++|+||+|+++|+|++ |..||...........+..+.....+   ..
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~  225 (256)
T cd05112         149 FVLDDQYTSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETINAGFRLYKP---RL  225 (256)
T ss_pred             ecccCcccccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHhCCCCCCCC---CC
Confidence            6543221  112234568999998864 45788999999999999998 99999877777767666544322222   23


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      .+..+.+++.+||+.+|.+|||+.++++.
T Consensus       226 ~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~  254 (256)
T cd05112         226 ASQSVYELMQHCWKERPEDRPSFSLLLHQ  254 (256)
T ss_pred             CCHHHHHHHHHHcccChhhCCCHHHHHHh
Confidence            68899999999999999999999999863

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.96  E-value=1.3e-28  Score=236.73  Aligned_cols=178  Identities=22%  Similarity=0.280  Sum_probs=144.7

Q ss_pred             ceeEeeecCCCChHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCC
Q 014171           39 KLRRIRLCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE  104 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~  104 (429)
                      .|+|+||+.+|+|.+++.+.+              ...++..++..++.|++.||.|||++|++||||||+||+++   .
T Consensus        93 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Nill~---~  169 (334)
T cd05100          93 LYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNVLVT---E  169 (334)
T ss_pred             eEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEc---C
Confidence            468999999999999996542              23478889999999999999999999999999999999998   4


Q ss_pred             CCCEEEeecccceeccCCCc---ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHH
Q 014171          105 DSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV  179 (429)
Q Consensus       105 ~~~~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i  179 (429)
                      ++.+||+|||.++.......   .....++..|+|||++.+ .++.++||||+||++|+|++ |..||.+.+.......+
T Consensus       170 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~  249 (334)
T cd05100         170 DNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLL  249 (334)
T ss_pred             CCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence            78899999999876543221   112233567999998864 46889999999999999998 88999888777777666


Q ss_pred             HhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          180 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      .....   .......+..+.+++.+||+.+|.+|||+.+++++
T Consensus       250 ~~~~~---~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~  289 (334)
T cd05100         250 KEGHR---MDKPANCTHELYMIMRECWHAVPSQRPTFKQLVED  289 (334)
T ss_pred             HcCCC---CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHH
Confidence            54432   12224578899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.96  E-value=1.9e-28  Score=231.50  Aligned_cols=182  Identities=16%  Similarity=0.190  Sum_probs=140.8

Q ss_pred             ccceeEeeecCCCChHHHHHhhcC---------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCC
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKD---------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS  107 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~---------~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~  107 (429)
                      ...|+||||+.+|+|.+++.....         ..+++.++..++.|++.||.|||++|++||||||+||+++   .++.
T Consensus        92 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~Nili~---~~~~  168 (296)
T cd05095          92 DPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRNCLVG---KNYT  168 (296)
T ss_pred             CccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChheEEEc---CCCC
Confidence            345789999999999999865421         2477889999999999999999999999999999999998   4788


Q ss_pred             EEEeecccceeccCCCc---ccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh--CCCCCCCCChhHHHHHHHh
Q 014171          108 LKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC--GRRPFWDKTEDGIFKEVLR  181 (429)
Q Consensus       108 ~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~--g~~pf~~~~~~~~~~~i~~  181 (429)
                      ++|+|||++..+.....   .....++..|+|||... +.++.++|+||+||++|+|++  |..||...+..........
T Consensus       169 ~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~  248 (296)
T cd05095         169 IKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENTGE  248 (296)
T ss_pred             EEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHHHH
Confidence            99999999876543221   11223456899999765 456889999999999999998  7789977666555443321


Q ss_pred             ----cCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          182 ----NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       182 ----~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                          .......+..+.++..+.+|+.+||+.||.+||++.++++
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~  292 (296)
T cd05095         249 FFRDQGRQVYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHA  292 (296)
T ss_pred             HHhhccccccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHH
Confidence                1111111222457789999999999999999999998864

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.96  E-value=9.8e-29  Score=232.02  Aligned_cols=177  Identities=23%  Similarity=0.273  Sum_probs=137.3

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .++||||++||+|.+++.+. ...+++..+..++.|++.||.|||++|++||||||+||+++   .++.++|+|||++..
T Consensus        83 ~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~---~~~~~~l~dfg~~~~  158 (284)
T cd05079          83 IKLIMEFLPSGSLKEYLPRN-KNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVE---SEHQVKIGDFGLTKA  158 (284)
T ss_pred             eEEEEEccCCCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEc---CCCCEEECCCccccc
Confidence            46899999999999988554 24689999999999999999999999999999999999998   478899999999876


Q ss_pred             ccCCCc----ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCCh--------------hHHHHHH
Q 014171          119 IKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE--------------DGIFKEV  179 (429)
Q Consensus       119 ~~~~~~----~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~--------------~~~~~~i  179 (429)
                      ......    .....++..|+|||.+.+ .++.++|+||+||++|+|+++..|......              .......
T Consensus       159 ~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (284)
T cd05079         159 IETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVRV  238 (284)
T ss_pred             cccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHHH
Confidence            643321    123456678999998764 468899999999999999998776532110              0111111


Q ss_pred             HhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          180 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      .....  ..+.+..++..+.+|+.+||+.+|.+|||++++++
T Consensus       239 ~~~~~--~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~  278 (284)
T cd05079         239 LEEGK--RLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIE  278 (284)
T ss_pred             HHcCc--cCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            11111  12233568899999999999999999999999975

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.96  E-value=1.2e-28  Score=233.72  Aligned_cols=177  Identities=22%  Similarity=0.233  Sum_probs=141.7

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .++|+||+++|+|.+++... ...+++..+..++.|++.||.|||++||+||||||+||+++   .++.+||+|||++..
T Consensus        83 ~~~v~e~~~~g~l~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~---~~~~~kL~Dfg~~~~  158 (303)
T cd05110          83 IQLVTQLMPHGCLLDYVHEH-KDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVK---SPNHVKITDFGLARL  158 (303)
T ss_pred             ceeeehhcCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeec---CCCceEEcccccccc
Confidence            35789999999999988654 34689999999999999999999999999999999999998   467899999999986


Q ss_pred             ccCCCc---ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          119 IKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       119 ~~~~~~---~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      ......   .....++..|+|||.+.+ .++.++||||+||++|+|++ |+.||.+.........+..+ ..++  ..+.
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~~~~~~~~~~~~-~~~~--~~~~  235 (303)
T cd05110         159 LEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEKG-ERLP--QPPI  235 (303)
T ss_pred             ccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHCC-CCCC--CCCC
Confidence            543322   122344678999998864 45889999999999999997 89999776655544433332 2222  2245


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      .+..+.+++.+||..+|.+||++.++++.
T Consensus       236 ~~~~~~~li~~c~~~~p~~Rp~~~~l~~~  264 (303)
T cd05110         236 CTIDVYMVMVKCWMIDADSRPKFKELAAE  264 (303)
T ss_pred             CCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            68899999999999999999999998753

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.96  E-value=2e-28  Score=225.41  Aligned_cols=177  Identities=21%  Similarity=0.259  Sum_probs=142.9

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|+||+.|++|.+++... ...+++..+..++.+++.||.|||++|++||||+|+||+++   .++.++|+|||.+.
T Consensus        66 ~~~~v~e~~~~~~l~~~l~~~-~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~---~~~~~~l~d~g~~~  141 (251)
T cd05041          66 PIYIVMELVPGGSLLTFLRKK-KNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVG---ENNVLKISDFGMSR  141 (251)
T ss_pred             CeEEEEEcCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEc---CCCcEEEeeccccc
Confidence            457899999999999988654 35689999999999999999999999999999999999998   57899999999987


Q ss_pred             eccCCCcc---cccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCC
Q 014171          118 FIKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWP  192 (429)
Q Consensus       118 ~~~~~~~~---~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  192 (429)
                      ........   ....++..|+|||.+.+ .++.++|+||+||++|+|++ |..||...........+.... ..  ....
T Consensus       142 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~~-~~--~~~~  218 (251)
T cd05041         142 EEEGGIYTVSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESGY-RM--PAPQ  218 (251)
T ss_pred             cccCCcceeccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcCC-CC--CCCc
Confidence            65422211   11223556999998764 46889999999999999999 888987777666555554332 11  1224


Q ss_pred             CCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          193 SISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       193 ~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      .++..+.+++.+||+.+|.+|||+.++++
T Consensus       219 ~~~~~~~~li~~~l~~~p~~Rp~~~ell~  247 (251)
T cd05041         219 LCPEEIYRLMLQCWAYDPENRPSFSEIYN  247 (251)
T ss_pred             cCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence            57889999999999999999999999985

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.96  E-value=2.1e-28  Score=231.02  Aligned_cols=182  Identities=17%  Similarity=0.185  Sum_probs=140.8

Q ss_pred             ccceeEeeecCCCChHHHHHhhc----------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCC
Q 014171           37 LRKLRRIRLCEGGELLDRILAKK----------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS  106 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~----------~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~  106 (429)
                      ...++|||||.+|+|.+++....          ...+++..+..++.|++.||.|||++|++|+||||+||+++   .++
T Consensus        90 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nill~---~~~  166 (295)
T cd05097          90 DPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNCLVG---NHY  166 (295)
T ss_pred             CccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhEEEc---CCC
Confidence            34578999999999999885431          02368889999999999999999999999999999999998   467


Q ss_pred             CEEEeecccceeccCCCc---ccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh--CCCCCCCCChhHHHHHHH
Q 014171          107 SLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC--GRRPFWDKTEDGIFKEVL  180 (429)
Q Consensus       107 ~~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~--g~~pf~~~~~~~~~~~i~  180 (429)
                      .+||+|||++........   .....++..|+|||.+. +.++.++|+||+||++|+|++  |..||...+.......+.
T Consensus       167 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~  246 (295)
T cd05097         167 TIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTG  246 (295)
T ss_pred             cEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHH
Confidence            899999999876543221   12224467899999875 456889999999999999988  677887766665554432


Q ss_pred             hc----CCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          181 RN----KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       181 ~~----~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ..    .........+..++.+.+|+.+||+.+|.+|||++++++
T Consensus       247 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~  291 (295)
T cd05097         247 EFFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHH  291 (295)
T ss_pred             HhhhhccccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            21    111111223457899999999999999999999999864

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=3.4e-29  Score=231.50  Aligned_cols=185  Identities=28%  Similarity=0.504  Sum_probs=151.0

Q ss_pred             eeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           40 LRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        40 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~--i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      |-|+|||+|.+|--||..+  ..+++.+++.|+.||+.||.||....  |+|-||||.|||+......|.+||.|||+++
T Consensus       544 CTVLEYceGNDLDFYLKQh--klmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSK  621 (775)
T KOG1151|consen  544 CTVLEYCEGNDLDFYLKQH--KLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSK  621 (775)
T ss_pred             eeeeeecCCCchhHHHHhh--hhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhh
Confidence            4589999999998888555  68999999999999999999999875  9999999999999976677899999999998


Q ss_pred             eccCCC--------cccccccCCccccccccc-C----CCCCCcchHHHHHHHHHHhhCCCCCCCCCh-hHHHH--HHHh
Q 014171          118 FIKPGK--------KFQDIVGSAYYVAPEVLK-R----KSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK--EVLR  181 (429)
Q Consensus       118 ~~~~~~--------~~~~~~g~~~y~aPE~~~-~----~~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~--~i~~  181 (429)
                      .+....        ..+...||.+|++||.+. +    +.+.++||||+|||+|.++.|+-||..... ..++.  .|+.
T Consensus       622 IMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQdILqeNTIlk  701 (775)
T KOG1151|consen  622 IMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQDILQENTILK  701 (775)
T ss_pred             hccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHHHHHhhhchhc
Confidence            875432        234567999999999884 2    237889999999999999999999965433 33332  1221


Q ss_pred             -cCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          182 -NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       182 -~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                       ....|+  +-|-++.++++||++||++.-++|..+.++..||||...
T Consensus       702 AtEVqFP--~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA~dpyllPh  747 (775)
T KOG1151|consen  702 ATEVQFP--PKPVVSSEAKAFIRRCLAYRKEDRIDVQQLACDPYLLPH  747 (775)
T ss_pred             ceeccCC--CCCccCHHHHHHHHHHHHhhhhhhhhHHHHccCccccch
Confidence             223343  345689999999999999999999999999999999864

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.96  E-value=1.5e-28  Score=237.12  Aligned_cols=156  Identities=23%  Similarity=0.277  Sum_probs=121.7

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc---ccccccCCcccccc
Q 014171           62 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPE  138 (429)
Q Consensus        62 ~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE  138 (429)
                      .+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++........   .....++..|+|||
T Consensus       175 ~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE  251 (343)
T cd05103         175 VLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---ENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPE  251 (343)
T ss_pred             cCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEc---CCCcEEEEecccccccccCcchhhcCCCCCCcceECcH
Confidence            367888899999999999999999999999999999998   578999999999876532211   11233456799999


Q ss_pred             cccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCH
Q 014171          139 VLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA  216 (429)
Q Consensus       139 ~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~  216 (429)
                      .+.+ .++.++|+||+|+++|+|++ |..||.+...................  ....++++.+++.+||+.+|.+|||+
T Consensus       252 ~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~cl~~~p~~Rps~  329 (343)
T cd05103         252 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRA--PDYTTPEMYQTMLDCWHGEPSQRPTF  329 (343)
T ss_pred             HhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHHHHHHHhccCCCCC--CCCCCHHHHHHHHHHccCChhhCcCH
Confidence            8754 46889999999999999997 99999765543333333322222221  23467899999999999999999999


Q ss_pred             HHHhCC
Q 014171          217 AQALSH  222 (429)
Q Consensus       217 ~e~l~h  222 (429)
                      .++++|
T Consensus       330 ~eil~~  335 (343)
T cd05103         330 SELVEH  335 (343)
T ss_pred             HHHHHH
Confidence            999865

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.96  E-value=2.7e-28  Score=227.48  Aligned_cols=176  Identities=18%  Similarity=0.275  Sum_probs=141.8

Q ss_pred             eeEeeecCCCChHHHHHhhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           40 LRRIRLCEGGELLDRILAKK----DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        40 ~lv~e~~~gg~L~~~l~~~~----~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      ++++||+.+|+|..++....    ...+++..+..++.|++.||.|||++||+||||||+||+++   .++.++|+|||.
T Consensus        83 ~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~---~~~~~kl~dfg~  159 (273)
T cd05074          83 MVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLN---ENMTVCVADFGL  159 (273)
T ss_pred             EEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEc---CCCCEEECcccc
Confidence            57899999999998875432    13578999999999999999999999999999999999998   478899999999


Q ss_pred             ceeccCCCc---ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCC
Q 014171          116 SDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKP  190 (429)
Q Consensus       116 a~~~~~~~~---~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~  190 (429)
                      +........   .....+++.|++||.+.+ .++.++||||+||++|+|++ |++||.+.........+......   ..
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~---~~  236 (273)
T cd05074         160 SKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYLIKGNRL---KQ  236 (273)
T ss_pred             cccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHHHcCCcC---CC
Confidence            886543221   122345578999998864 45889999999999999999 89999877776666665544321   11


Q ss_pred             CCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          191 WPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       191 ~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      .+..+..+.+++.+||+.+|++|||+.++++
T Consensus       237 ~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~  267 (273)
T cd05074         237 PPDCLEDVYELMCQCWSPEPKCRPSFQHLRD  267 (273)
T ss_pred             CCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            2457889999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.96  E-value=7.1e-29  Score=257.45  Aligned_cols=180  Identities=24%  Similarity=0.326  Sum_probs=138.5

Q ss_pred             cceeEeeecCCCChHHHHHhhc---------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCE
Q 014171           38 RKLRRIRLCEGGELLDRILAKK---------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL  108 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~---------~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~  108 (429)
                      ..|+|||||+||+|.+++....         ...++...+..++.||+.||.|||++||+||||||+||+++   ..+.+
T Consensus        76 ~lyLVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd---~dg~v  152 (932)
T PRK13184         76 PVYYTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLG---LFGEV  152 (932)
T ss_pred             EEEEEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEc---CCCCE
Confidence            4578999999999999886421         13356677889999999999999999999999999999998   47889


Q ss_pred             EEeecccceeccCC-------------------CcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCC
Q 014171          109 KATDFGLSDFIKPG-------------------KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFW  168 (429)
Q Consensus       109 kL~Dfg~a~~~~~~-------------------~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~  168 (429)
                      +|+|||++......                   ......+||+.|+|||.+.+ .++.++||||+||++|+|+||..||.
T Consensus       153 KLiDFGLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~  232 (932)
T PRK13184        153 VILDWGAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYR  232 (932)
T ss_pred             EEEecCcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCC
Confidence            99999999765211                   01123468999999999865 45889999999999999999999997


Q ss_pred             CCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          169 DKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       169 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ...............+ ....++..+++.+.+++.+||+.||++|++..+.+.
T Consensus       233 ~~~~~ki~~~~~i~~P-~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl  284 (932)
T PRK13184        233 RKKGRKISYRDVILSP-IEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELK  284 (932)
T ss_pred             CcchhhhhhhhhccCh-hhccccccCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            7554433322111111 111223467899999999999999999987665554

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.96  E-value=3.6e-28  Score=221.61  Aligned_cols=183  Identities=43%  Similarity=0.727  Sum_probs=151.2

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...++|+||+.+|+|.+++...  ..+++..+..++.+++.++.|||+.|++|+||+|+||+++   .++.++|+|||.+
T Consensus        60 ~~~~l~~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~---~~~~~~l~d~~~~  134 (244)
T smart00220       60 DKLYLVMEYCDGGDLFDLLKKR--GRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLD---EDGHVKLADFGLA  134 (244)
T ss_pred             CEEEEEEeCCCCCCHHHHHHhc--cCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEEC---CCCcEEEccccce
Confidence            3457899999999999988654  3489999999999999999999999999999999999999   4689999999999


Q ss_pred             eeccCCCcccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhhCCCCCCC-CChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~-~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      .............++..|++||.+. ...+.++|+||+|++++++++|..||.. .........+....... ......+
T Consensus       135 ~~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  213 (244)
T smart00220      135 RQLDPGGLLTTFVGTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLLELFKKIGKPKPPF-PPPEWKI  213 (244)
T ss_pred             eeeccccccccccCCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCCCC-ccccccC
Confidence            8776554455667888999999886 4458899999999999999999999977 44444444443333222 2222227


Q ss_pred             CHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          195 SNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                      +.++.+++.+||..+|.+||++.++++||||
T Consensus       214 ~~~~~~~i~~~l~~~p~~Rp~~~~~~~~~~~  244 (244)
T smart00220      214 SPEAKDLIRKLLVKDPEKRLTAEEALQHPFF  244 (244)
T ss_pred             CHHHHHHHHHHccCCchhccCHHHHhhCCCC
Confidence            8999999999999999999999999999997

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.96  E-value=2e-28  Score=231.17  Aligned_cols=171  Identities=15%  Similarity=0.154  Sum_probs=134.1

Q ss_pred             eeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccceec
Q 014171           40 LRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI  119 (429)
Q Consensus        40 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~  119 (429)
                      +++++++. +++.+.+...  ...++..+..++.|++.||.|||+++|+||||||+||+++   ..+.++|+|||+|+..
T Consensus       103 ~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~---~~~~~~l~DFGla~~~  176 (294)
T PHA02882        103 FILLEKLV-ENTKEIFKRI--KCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVD---GNNRGYIIDYGIASHF  176 (294)
T ss_pred             EEEEehhc-cCHHHHHHhh--ccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCcEEEEEcCCceee
Confidence            57888875 4666666433  4568899999999999999999999999999999999998   4678999999999765


Q ss_pred             cCCC--------cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChh-HHH--------HHHHh
Q 014171          120 KPGK--------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED-GIF--------KEVLR  181 (429)
Q Consensus       120 ~~~~--------~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~--------~~i~~  181 (429)
                      ....        ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+.... ...        ..+..
T Consensus       177 ~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~~~~~~~~~~~~~  256 (294)
T PHA02882        177 IIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIHAAKCDFIKRLHE  256 (294)
T ss_pred             ccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHHHhHHHHHHHhhh
Confidence            3221        1123468999999999875 4589999999999999999999999776332 221        12222


Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          182 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      +..     ..+..+..+.+++..||..+|.+||+++++++
T Consensus       257 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~  291 (294)
T PHA02882        257 GKI-----KIKNANKFIYDFIECVTKLSYEEKPDYDALIK  291 (294)
T ss_pred             hhh-----ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            211     22456889999999999999999999999864

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.96  E-value=4.2e-29  Score=265.62  Aligned_cols=181  Identities=20%  Similarity=0.275  Sum_probs=134.1

Q ss_pred             eEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeec----------------CC
Q 014171           41 RRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA----------------KE  104 (429)
Q Consensus        41 lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~----------------~~  104 (429)
                      +++|++ +++|.+++... ...+++.++..+++||+.||.|||++||+||||||+|||++..                ..
T Consensus        57 ~~~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~  134 (793)
T PLN00181         57 RALECE-DVSLRQWLDNP-DRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDE  134 (793)
T ss_pred             hhhccC-CccHHHHHhcc-cccccHHHHHHHHHHHHHHHHHHHhCCeeeccCCchhEEEcccCcEEEeeccccCcccccc
Confidence            467776 67999998543 3569999999999999999999999999999999999999631                13


Q ss_pred             CCCEEEeecccceeccCCC-----------------cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCC
Q 014171          105 DSSLKATDFGLSDFIKPGK-----------------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRP  166 (429)
Q Consensus       105 ~~~~kL~Dfg~a~~~~~~~-----------------~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~p  166 (429)
                      .+.+|++|||+++......                 ......||+.|+|||++.+ .++.++||||+||++|||++|.+|
T Consensus       135 ~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~  214 (793)
T PLN00181        135 DATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSS  214 (793)
T ss_pred             cCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCc
Confidence            4567788888776432100                 0012357889999999864 578999999999999999999888


Q ss_pred             CCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          167 FWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       167 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      +....  .....+....  .++. ..........++.+||+.+|.+||++.++++||||...
T Consensus       215 ~~~~~--~~~~~~~~~~--~~~~-~~~~~~~~~~~~~~~L~~~P~~Rps~~eil~h~~~~~~  271 (793)
T PLN00181        215 REEKS--RTMSSLRHRV--LPPQ-ILLNWPKEASFCLWLLHPEPSCRPSMSELLQSEFINEP  271 (793)
T ss_pred             hhhHH--HHHHHHHHhh--cChh-hhhcCHHHHHHHHHhCCCChhhCcChHHHhhchhhhhh
Confidence            74321  1222222111  1111 11224567789999999999999999999999999864

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.96  E-value=3.4e-28  Score=228.30  Aligned_cols=177  Identities=22%  Similarity=0.307  Sum_probs=136.4

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .++|+||+.+|+|.+++.+. ...+++..+..++.|++.||.|||++|++||||||+||+++   .++.++|+|||++..
T Consensus        82 ~~lv~e~~~~~~L~~~l~~~-~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~---~~~~~~l~dfg~~~~  157 (284)
T cd05081          82 LRLVMEYLPYGSLRDYLQKH-RERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVE---SENRVKIGDFGLTKV  157 (284)
T ss_pred             eEEEEEecCCCCHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEEC---CCCeEEECCCccccc
Confidence            46899999999999998654 25689999999999999999999999999999999999998   478899999999986


Q ss_pred             ccCCCcc----cccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhH---------------HHHH
Q 014171          119 IKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDG---------------IFKE  178 (429)
Q Consensus       119 ~~~~~~~----~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~---------------~~~~  178 (429)
                      .......    ....++..|+|||.+.+ .++.++|+||+||++|+|++|..|+......-               ....
T Consensus       158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (284)
T cd05081         158 LPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLIE  237 (284)
T ss_pred             ccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHHH
Confidence            6433221    11223456999999864 45889999999999999999877754332110               0111


Q ss_pred             HHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          179 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       179 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      +......+  +....++..+.+++.+||..+|++|||+.++++
T Consensus       238 ~~~~~~~~--~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05081         238 LLKNNGRL--PAPPGCPAEIYAIMKECWNNDPSQRPSFSELAL  278 (284)
T ss_pred             HHhcCCcC--CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            12222111  223467899999999999999999999999875

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.96  E-value=4.5e-28  Score=237.39  Aligned_cols=156  Identities=20%  Similarity=0.224  Sum_probs=124.1

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc---ccccccCCcccccc
Q 014171           62 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPE  138 (429)
Q Consensus        62 ~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE  138 (429)
                      .+++..+..++.||+.||.|||+.+++||||||+||+++   ..+.++|+|||++........   .....++..|+|||
T Consensus       235 ~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp~NiLl~---~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE  311 (401)
T cd05107         235 ALSYMDLVGFSYQVANGMEFLASKNCVHRDLAARNVLIC---EGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPE  311 (401)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCcceEEEe---CCCEEEEEecCcceecccccccccCCCcCCCCceeChH
Confidence            367778899999999999999999999999999999998   477899999999876532211   12335678899999


Q ss_pred             cccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCH
Q 014171          139 VLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA  216 (429)
Q Consensus       139 ~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~  216 (429)
                      .+.+ .++.++|+||+||++|+|++ |..||......+............  ..+..++..+.+++.+||+.+|.+||++
T Consensus       312 ~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~l~~li~~cl~~~P~~RPs~  389 (401)
T cd05107         312 SIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQFYNAIKRGYRM--AKPAHASDEIYEIMQKCWEEKFEIRPDF  389 (401)
T ss_pred             HhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHHHHHHHcCCCC--CCCCCCCHHHHHHHHHHcCCChhHCcCH
Confidence            8864 45889999999999999998 899997765555444443332222  2234578999999999999999999999


Q ss_pred             HHHhCC
Q 014171          217 AQALSH  222 (429)
Q Consensus       217 ~e~l~h  222 (429)
                      +++++.
T Consensus       390 ~ell~~  395 (401)
T cd05107         390 SQLVHL  395 (401)
T ss_pred             HHHHHH
Confidence            999853

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.96  E-value=1.2e-28  Score=220.76  Aligned_cols=183  Identities=30%  Similarity=0.515  Sum_probs=154.2

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      .+.++|.||++||+|.-.+.++  ..+|++.++.+...|+-||.|||++||++||||.+|+|++   ..+++||.|+|++
T Consensus       324 srlffvieyv~ggdlmfhmqrq--rklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlld---aeghikltdygmc  398 (593)
T KOG0695|consen  324 SRLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLD---AEGHIKLTDYGMC  398 (593)
T ss_pred             ceEEEEEEEecCcceeeehhhh--hcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEc---cCCceeecccchh
Confidence            3456899999999998777544  6899999999999999999999999999999999999999   5899999999998


Q ss_pred             ee-ccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCC-------C-ChhHHHHHHHhcCCCC
Q 014171          117 DF-IKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWD-------K-TEDGIFKEVLRNKPDF  186 (429)
Q Consensus       117 ~~-~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~-------~-~~~~~~~~i~~~~~~~  186 (429)
                      +. +.++...++.+|||.|.|||++.+ .|+..+|+|++||++++|+.|+.||.-       . ++.-..+-|+.....+
T Consensus       399 ke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekqiri  478 (593)
T KOG0695|consen  399 KEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQIRI  478 (593)
T ss_pred             hcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhcccc
Confidence            75 456667789999999999999986 579999999999999999999999941       1 2222344455555555


Q ss_pred             CCCCCCCCCHHHHHHHHHhccCCccCcC------CHHHHhCCCccccC
Q 014171          187 RRKPWPSISNSAKDFVKKLLVKDPRARL------TAAQALSHPWVREG  228 (429)
Q Consensus       187 ~~~~~~~~~~~~~~li~~~l~~dp~~R~------s~~e~l~h~~~~~~  228 (429)
                      ++    ++|-.+..+++..|+.||.+|.      ...++..|+||+..
T Consensus       479 pr----slsvkas~vlkgflnkdp~erlgc~~~~g~~dik~h~ffr~i  522 (593)
T KOG0695|consen  479 PR----SLSVKASHVLKGFLNKDPKERLGCRPQTGFSDIKSHAFFRSI  522 (593)
T ss_pred             cc----eeehhhHHHHHHhhcCCcHHhcCCCcccchhhhhcchhhhhC
Confidence            44    5788889999999999999996      46788899999864

>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]

Probab=99.96  E-value=1.2e-28  Score=240.45  Aligned_cols=155  Identities=25%  Similarity=0.421  Sum_probs=126.2

Q ss_pred             cccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCC
Q 014171           15 LDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKD-SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMK   93 (429)
Q Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dik   93 (429)
                      ++|.|||...+.......+...-.+++|||||.||||...+.+-.+ .+|++.+...++.++..||.|||++||+|||||
T Consensus        68 Lnh~NIVk~f~iee~~~~~~~~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlK  147 (732)
T KOG4250|consen   68 LNHPNIVKLFDIEETKFLGLVTRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLK  147 (732)
T ss_pred             cCchhhhhhcccCCccccCcccccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCC
Confidence            3444444444333222222223446789999999999999954322 569999999999999999999999999999999


Q ss_pred             CCcEEEeecC-CCCCEEEeecccceeccCCCcccccccCCccccccccc--CCCCCCcchHHHHHHHHHHhhCCCCCCC
Q 014171           94 PENFLFKSAK-EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWD  169 (429)
Q Consensus        94 p~Nil~~~~~-~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~--~~~~~~~DiwslG~il~~l~~g~~pf~~  169 (429)
                      |.||++.... .....||+|||.|+.++.+....+..||..|.+||+..  +.|+..+|.||+||++|+++||..||..
T Consensus       148 P~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p  226 (732)
T KOG4250|consen  148 PGNIVLQIGEDGQSIYKLTDFGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIP  226 (732)
T ss_pred             CCcEEEeecCCCceEEeeecccccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCc
Confidence            9999988644 23446999999999999999999999999999999997  5678899999999999999999999953

>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]

Probab=99.95  E-value=7.9e-29  Score=237.51  Aligned_cols=195  Identities=20%  Similarity=0.339  Sum_probs=165.3

Q ss_pred             eecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 014171            5 LIGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL   84 (429)
Q Consensus         5 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~   84 (429)
                      +|+.++|||++.+++++..             ...|+|||+|+-|.|..|+..++ ..++......++.||+.||.|||+
T Consensus       444 iMrnfdHphIikLIGv~~e-------------~P~WivmEL~~~GELr~yLq~nk-~sL~l~tL~ly~~Qi~talaYLeS  509 (974)
T KOG4257|consen  444 IMRNFDHPHIIKLIGVCVE-------------QPMWIVMELAPLGELREYLQQNK-DSLPLRTLTLYCYQICTALAYLES  509 (974)
T ss_pred             HHHhCCCcchhheeeeeec-------------cceeEEEecccchhHHHHHHhcc-ccchHHHHHHHHHHHHHHHHHHHh
Confidence            5778899999999887764             23468999999999999997765 679999999999999999999999


Q ss_pred             CCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCccccccc--CCccccccccc-CCCCCCcchHHHHHHHHHHh
Q 014171           85 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITYILL  161 (429)
Q Consensus        85 ~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g--~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~  161 (429)
                      .++|||||-..|||+.+   ...+||+|||+++.+.....+....|  ..-|+|||.++ ..++.++|||-|||++||++
T Consensus       510 krfVHRDIAaRNiLVsS---p~CVKLaDFGLSR~~ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl  586 (974)
T KOG4257|consen  510 KRFVHRDIAARNILVSS---PQCVKLADFGLSRYLEDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEIL  586 (974)
T ss_pred             hchhhhhhhhhheeecC---cceeeecccchhhhccccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHH
Confidence            99999999999999994   67899999999998876655443333  45799999997 56799999999999999988


Q ss_pred             h-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHH
Q 014171          162 C-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA  219 (429)
Q Consensus       162 ~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~  219 (429)
                      . |.-||.+-...+.+-.+-.+..   .+.++.+++.+..|+.+||.++|.+||++.++
T Consensus       587 ~lGvkPfqgvkNsDVI~~iEnGeR---lP~P~nCPp~LYslmskcWayeP~kRPrftei  642 (974)
T KOG4257|consen  587 SLGVKPFQGVKNSDVIGHIENGER---LPCPPNCPPALYSLMSKCWAYEPSKRPRFTEI  642 (974)
T ss_pred             HhcCCccccccccceEEEecCCCC---CCCCCCCChHHHHHHHHHhccCcccCCcHHHH
Confidence            6 9999999887777766666653   23346799999999999999999999988765

>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]

Probab=99.95  E-value=2.6e-28  Score=233.78  Aligned_cols=196  Identities=18%  Similarity=0.254  Sum_probs=164.9

Q ss_pred             eecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 014171            5 LIGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL   84 (429)
Q Consensus         5 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~   84 (429)
                      .|++++|+|.++++++|...            ...|||+|||..|+|++||.+.....++...+..++.||.+|++||..
T Consensus       316 vMKeikHpNLVqLLGVCT~E------------pPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEk  383 (1157)
T KOG4278|consen  316 VMKEIKHPNLVQLLGVCTHE------------PPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEK  383 (1157)
T ss_pred             HHHhhcCccHHHHhhhhccC------------CCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHH
Confidence            57889999999999987752            334678999999999999988766778888999999999999999999


Q ss_pred             CCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCccccccc---CCccccccccc-CCCCCCcchHHHHHHHHHH
Q 014171           85 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG---SAYYVAPEVLK-RKSGPESDVWSIGVITYIL  160 (429)
Q Consensus        85 ~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g---~~~y~aPE~~~-~~~~~~~DiwslG~il~~l  160 (429)
                      +++|||||-..|+|++   +++.+|++|||+++.+..... ....|   ..-|.|||.+. ..++.++|||+|||+|||+
T Consensus       384 knFIHRDLAARNCLVg---EnhiVKvADFGLsRlMtgDTY-TAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEI  459 (1157)
T KOG4278|consen  384 KNFIHRDLAARNCLVG---ENHIVKVADFGLSRLMTGDTY-TAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEI  459 (1157)
T ss_pred             hhhhhhhhhhhhcccc---ccceEEeeccchhhhhcCCce-ecccCccCcccccCcccccccccccchhhHHHHHHHHHH
Confidence            9999999999999999   688999999999998865433 22233   45699999986 5569999999999999999


Q ss_pred             hh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHH
Q 014171          161 LC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA  219 (429)
Q Consensus       161 ~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~  219 (429)
                      .| |..||.+.+....+..+-. .+++..  +..+++.+.+|+..||+.+|.+||++.++
T Consensus       460 ATYGMsPYPGidlSqVY~LLEk-gyRM~~--PeGCPpkVYeLMraCW~WsPsDRPsFaei  516 (1157)
T KOG4278|consen  460 ATYGMSPYPGIDLSQVYGLLEK-GYRMDG--PEGCPPKVYELMRACWNWSPSDRPSFAEI  516 (1157)
T ss_pred             HhcCCCCCCCccHHHHHHHHhc-cccccC--CCCCCHHHHHHHHHHhcCCcccCccHHHH
Confidence            98 8899988887776654443 344443  35799999999999999999999999876

>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]

Probab=99.95  E-value=1.4e-28  Score=209.48  Aligned_cols=211  Identities=27%  Similarity=0.500  Sum_probs=164.9

Q ss_pred             ceeeecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHH
Q 014171            2 IKILIGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE   81 (429)
Q Consensus         2 ik~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~   81 (429)
                      ||+|..-..++|++.++.++..-.+.          .+.||+||.++.+...+.     ..++...++.++.+++.||.|
T Consensus        83 ikIL~nL~gg~NIi~L~DiV~Dp~Sk----------tpaLiFE~v~n~Dfk~ly-----~tl~d~dIryY~~elLkALdy  147 (338)
T KOG0668|consen   83 IKILQNLRGGPNIIKLLDIVKDPESK----------TPSLIFEYVNNTDFKQLY-----PTLTDYDIRYYIYELLKALDY  147 (338)
T ss_pred             HHHHHhccCCCCeeehhhhhcCcccc----------CchhHhhhhccccHHHHh-----hhhchhhHHHHHHHHHHHHhH
Confidence            45555555688888888877752111          123688999999988776     468899999999999999999


Q ss_pred             HHHCCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccC--CCCCCcchHHHHHHHHH
Q 014171           82 CHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYI  159 (429)
Q Consensus        82 lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~  159 (429)
                      ||+.||+|||+||.|++++.  ....++|+|+|+|....++...+-.+.+..|--||.+-.  .+...-|+||+||++..
T Consensus       148 CHS~GImHRDVKPhNvmIdh--~~rkLrlIDWGLAEFYHp~~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~  225 (338)
T KOG0668|consen  148 CHSMGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLAS  225 (338)
T ss_pred             HHhcCcccccCCcceeeech--hhceeeeeecchHhhcCCCceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHH
Confidence            99999999999999999996  567899999999999888877777788999999999864  46788999999999999


Q ss_pred             HhhCCCCCCCC-ChhHHHHHHHh-------------cCCCC-----------CCCCCC---------CCCHHHHHHHHHh
Q 014171          160 LLCGRRPFWDK-TEDGIFKEVLR-------------NKPDF-----------RRKPWP---------SISNSAKDFVKKL  205 (429)
Q Consensus       160 l~~g~~pf~~~-~~~~~~~~i~~-------------~~~~~-----------~~~~~~---------~~~~~~~~li~~~  205 (429)
                      |+..+.||... +..+.+.+|..             -....           ....|.         -+++++.+|+.++
T Consensus       226 miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldkl  305 (338)
T KOG0668|consen  226 MIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKL  305 (338)
T ss_pred             HHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHH
Confidence            99999998543 33333222211             01111           111221         2468999999999


Q ss_pred             ccCCccCcCCHHHHhCCCccccCC
Q 014171          206 LVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       206 l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      |..|-.+|+||+|++.||||....
T Consensus       306 LrYDHqeRlTakEam~HpyF~~~~  329 (338)
T KOG0668|consen  306 LRYDHQERLTAKEAMAHPYFAPVR  329 (338)
T ss_pred             HhhccccccchHHHhcCchHHHHH
Confidence            999999999999999999998653

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.95  E-value=5.5e-28  Score=251.29  Aligned_cols=99  Identities=29%  Similarity=0.536  Sum_probs=84.4

Q ss_pred             ccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhcc
Q 014171          129 VGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV  207 (429)
Q Consensus       129 ~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~  207 (429)
                      +||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+.........+......++... ..++..+.+++.+||.
T Consensus       541 vGT~~Y~APE~l~~~~~~~~~DiwSlG~il~ElltG~~pf~~~~~~~~~~~il~~~~~~p~~~-~~~~~~~~~~l~~lL~  619 (669)
T cd05610         541 LGTPDYLAPELLLGKPHGPAVDWWALGVCLFEFLTGIPPFNDETPQQVFQNILNRDIPWPEGE-EKLSVNAQNAIEILLT  619 (669)
T ss_pred             eeCccccCHHHcCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCccc-ccCCHHHHHHHHHHcc
Confidence            45888999998864 468899999999999999999999999888888888876655444332 3678889999999999


Q ss_pred             CCccCcCCHHHHhCCCccccC
Q 014171          208 KDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       208 ~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      .||.+||++.++++||||...
T Consensus       620 ~dP~~R~ta~e~l~h~~~~~~  640 (669)
T cd05610         620 MDPTKRAGLKELKQHPLFHGV  640 (669)
T ss_pred             cChhHCcCHHHHHhCHhhcCC
Confidence            999999999999999999764

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.95  E-value=3.7e-28  Score=232.83  Aligned_cols=202  Identities=24%  Similarity=0.313  Sum_probs=151.0

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH   85 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~   85 (429)
                      +..++|+|.+++++++.....           ..+||+||+..|+|.+.+.......++|.....|+.+++.||+|||..
T Consensus       125 ls~l~H~Nlv~LlGyC~e~~~-----------~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~  193 (361)
T KOG1187|consen  125 LSRLRHPNLVKLLGYCLEGGE-----------HRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEG  193 (361)
T ss_pred             HhcCCCcCcccEEEEEecCCc-----------eEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccC
Confidence            456788899888886664211           245799999999999999765433899999999999999999999985


Q ss_pred             C---CeecCCCCCcEEEeecCCCCCEEEeecccceeccC-CCccccc-ccCCccccccccc-CCCCCCcchHHHHHHHHH
Q 014171           86 G---LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-GKKFQDI-VGSAYYVAPEVLK-RKSGPESDVWSIGVITYI  159 (429)
Q Consensus        86 ~---i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~-~~~~~~~-~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~  159 (429)
                      .   |+||||||+|||++   .+...||+|||+|+.... .....+. .||.+|+|||... +..+.++|||||||++.|
T Consensus       194 ~~~~iiHrDiKssNILLD---~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllE  270 (361)
T KOG1187|consen  194 CPPPIIHRDIKSSNILLD---EDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLE  270 (361)
T ss_pred             CCCCEecCCCCHHHeeEC---CCCCEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHH
Confidence            4   99999999999999   689999999999976654 3333333 8999999999986 566999999999999999


Q ss_pred             HhhCCCCCCCCC---hhHHH---HHHHhcC-C-C-CCCCCC-CCCC--HH---HHHHHHHhccCCccCcCCHHHHhC
Q 014171          160 LLCGRRPFWDKT---EDGIF---KEVLRNK-P-D-FRRKPW-PSIS--NS---AKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       160 l~~g~~pf~~~~---~~~~~---~~i~~~~-~-~-~~~~~~-~~~~--~~---~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ++||+.|.....   .....   ....... . . +.+... ...+  ..   +..+..+|++.+|..||++.++++
T Consensus       271 litgr~~~d~~~~~~~~~l~~w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~  347 (361)
T KOG1187|consen  271 LITGRKAVDQSRPRGELSLVEWAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVK  347 (361)
T ss_pred             HHhCCcccCCCCCcccccHHHHHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHH
Confidence            999998876432   11111   1111111 1 1 111111 1222  22   456778999999999999998743

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.95  E-value=1e-27  Score=224.75  Aligned_cols=178  Identities=22%  Similarity=0.328  Sum_probs=139.3

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..++||||+++|+|.+++.... ..+++..+..++.|++.||.|||++|++|+||||+||+++   .++.++|+|||.+.
T Consensus        82 ~~~lv~e~~~~~~l~~~l~~~~-~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~---~~~~~~l~dfg~~~  157 (284)
T cd05038          82 SLRLIMEYLPSGSLRDYLQRHR-DQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVE---SEDLVKISDFGLAK  157 (284)
T ss_pred             ceEEEEecCCCCCHHHHHHhCc-cccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEc---CCCCEEEccccccc
Confidence            3578999999999999996553 3699999999999999999999999999999999999998   46899999999998


Q ss_pred             eccCCCcc----cccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhH--------------HHHH
Q 014171          118 FIKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDG--------------IFKE  178 (429)
Q Consensus       118 ~~~~~~~~----~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--------------~~~~  178 (429)
                      ........    ....++..|+|||.+.+ ..+.++|+||+|+++|+|++|..|+.......              ....
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (284)
T cd05038         158 VLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLE  237 (284)
T ss_pred             ccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHH
Confidence            76532211    12234567999998754 45889999999999999999999986543221              1112


Q ss_pred             HHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          179 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       179 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ........+  ....++..+.+++.+||+.+|.+|||+.++++
T Consensus       238 ~~~~~~~~~--~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~  278 (284)
T cd05038         238 LLKEGERLP--RPPSCPDEVYDLMKLCWEAEPQDRPSFADLIL  278 (284)
T ss_pred             HHHcCCcCC--CCccCCHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            222222222  22456789999999999999999999999874

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]

Probab=99.95  E-value=1.1e-28  Score=232.02  Aligned_cols=184  Identities=25%  Similarity=0.410  Sum_probs=150.7

Q ss_pred             eeEeeecCCCChHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           40 LRRIRLCEGGELLDRILAK-KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        40 ~lv~e~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      |||+|-+. .+|.+.|.+. ++-.|....++.|+.|++.||..|-.+||+|+||||+|||++.  ....+||||||.|..
T Consensus       510 ClVFE~Ls-lNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE--~k~iLKLCDfGSA~~  586 (752)
T KOG0670|consen  510 CLVFEPLS-LNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNE--SKNILKLCDFGSASF  586 (752)
T ss_pred             EEEehhhh-chHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEecc--CcceeeeccCccccc
Confidence            46777776 7999999765 3456999999999999999999999999999999999999985  567899999999987


Q ss_pred             ccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCC------
Q 014171          119 IKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW------  191 (429)
Q Consensus       119 ~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~------  191 (429)
                      ...+.. .+..-+..|.|||++.| +|....|+||+||+|||++||+..|.|.+...++...+.-...|+...+      
T Consensus       587 ~~enei-tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk~p~KmlRKgqF~  665 (752)
T KOG0670|consen  587 ASENEI-TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGKFPNKMLRKGQFK  665 (752)
T ss_pred             cccccc-cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCCCcHHHhhhcchh
Confidence            765544 34456778999999887 5799999999999999999999999999988887655543333322100      


Q ss_pred             -------------------------------------------CCCC-------HHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          192 -------------------------------------------PSIS-------NSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       192 -------------------------------------------~~~~-------~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                                                                 +.++       ..+++|+.+||..||.+|.|..++|+
T Consensus       666 dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~KRit~nqAL~  745 (752)
T KOG0670|consen  666 DQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPEKRITVNQALK  745 (752)
T ss_pred             hhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChhhcCCHHHHhc
Confidence                                                       0011       35789999999999999999999999


Q ss_pred             CCcccc
Q 014171          222 HPWVRE  227 (429)
Q Consensus       222 h~~~~~  227 (429)
                      ||||..
T Consensus       746 HpFi~~  751 (752)
T KOG0670|consen  746 HPFITE  751 (752)
T ss_pred             CCcccC
Confidence            999975

>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]

Probab=99.95  E-value=4.2e-27  Score=241.07  Aligned_cols=180  Identities=27%  Similarity=0.435  Sum_probs=138.1

Q ss_pred             eeEeeecCCCChHHHHHhhcCCCC-CHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           40 LRRIRLCEGGELLDRILAKKDSRY-TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        40 ~lv~e~~~gg~L~~~l~~~~~~~l-~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      |+=||||+.-.|.+++.++.  .. .-..++.++++|++||.|+|+.|||||||||.||+++   ..+.|||+|||+|..
T Consensus       672 YIQMEyCE~~ll~~iI~~N~--~~~~~d~~wrLFreIlEGLaYIH~~giIHRDLKP~NIFLd---~~~~VKIGDFGLAt~  746 (1351)
T KOG1035|consen  672 YIQMEYCEKTLLRDIIRRNH--FNSQRDEAWRLFREILEGLAYIHDQGIIHRDLKPRNIFLD---SRNSVKIGDFGLATD  746 (1351)
T ss_pred             EEEHhhhhhhHHHHHHHhcc--cchhhHHHHHHHHHHHHHHHHHHhCceeeccCCcceeEEc---CCCCeeecccccchh
Confidence            67899999766666664442  22 4778999999999999999999999999999999999   578999999999976


Q ss_pred             cc-------------------CCCcccccccCCcccccccccC----CCCCCcchHHHHHHHHHHhhCCCCCCCC-ChhH
Q 014171          119 IK-------------------PGKKFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLCGRRPFWDK-TEDG  174 (429)
Q Consensus       119 ~~-------------------~~~~~~~~~g~~~y~aPE~~~~----~~~~~~DiwslG~il~~l~~g~~pf~~~-~~~~  174 (429)
                      ..                   .....+..+||..|+|||++.+    .|+.|+|+||+||+++||+.   ||... ....
T Consensus       747 ~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~  823 (1351)
T KOG1035|consen  747 LKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSMERAS  823 (1351)
T ss_pred             hhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHHHHH
Confidence            21                   1113355689999999999953    57899999999999999986   56433 2333


Q ss_pred             HHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcccc
Q 014171          175 IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE  227 (429)
Q Consensus       175 ~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~  227 (429)
                      ++..+..+..+.+...+-.--+.-..+|+.|++.||.+||||.|+|++.||-.
T Consensus       824 iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll~hdP~kRPtA~eLL~s~llpp  876 (1351)
T KOG1035|consen  824 ILTNLRKGSIPEPADFFDPEHPEEASLIRWLLSHDPSKRPTATELLNSELLPP  876 (1351)
T ss_pred             HHHhcccCCCCCCcccccccchHHHHHHHHHhcCCCccCCCHHHHhhccCCCc
Confidence            44444444433332222223345678999999999999999999999999864

>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]

Probab=99.95  E-value=4.1e-29  Score=217.22  Aligned_cols=195  Identities=21%  Similarity=0.236  Sum_probs=156.5

Q ss_pred             eccccceeEeeecCCCChHHHH---HhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEeecCCCCCEE
Q 014171           34 VLPLRKLRRIRLCEGGELLDRI---LAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLK  109 (429)
Q Consensus        34 ~~~~~~~lv~e~~~gg~L~~~l---~~~~~~~l~~~~~~~i~~qil~aL~~lH~-~~i~H~dikp~Nil~~~~~~~~~~k  109 (429)
                      +....+|+.||++. -||-.+.   ...++..++|..+..|..-.+.||.||-. .+|+||||||+|||++   ..|.+|
T Consensus       133 F~EGdcWiCMELMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILld---r~G~vK  208 (361)
T KOG1006|consen  133 FSEGDCWICMELMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLD---RHGDVK  208 (361)
T ss_pred             hcCCceeeeHHHHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEe---cCCCEe
Confidence            34566788999997 4553333   33456789999999999999999999986 5899999999999999   589999


Q ss_pred             EeecccceeccCCCcccccccCCccccccccc---CCCCCCcchHHHHHHHHHHhhCCCCCCCCCh-hHHHHHHHhcCCC
Q 014171          110 ATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK---RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLRNKPD  185 (429)
Q Consensus       110 L~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~---~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~i~~~~~~  185 (429)
                      |||||++..+...-.....+|...|+|||.+.   .+|.-+||+||||++|||+.||+.|+.+.+. -+.+..+..+.+.
T Consensus       209 LCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp  288 (361)
T KOG1006|consen  209 LCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPP  288 (361)
T ss_pred             eecccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCC
Confidence            99999998776555555668999999999985   2478899999999999999999999977643 3445555556544


Q ss_pred             CCCCCC--CCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCCC
Q 014171          186 FRRKPW--PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS  232 (429)
Q Consensus       186 ~~~~~~--~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~~  232 (429)
                      ......  -.++..+..+|.-||..|-+.||...+++.+||++.+....
T Consensus       289 ~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~~fyr~y~~~~  337 (361)
T KOG1006|consen  289 ILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKFPFYRMYAVEG  337 (361)
T ss_pred             eecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcCchhhhhhhcC
Confidence            322221  24688999999999999999999999999999999875443

>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]

Probab=99.95  E-value=1.6e-28  Score=242.92  Aligned_cols=185  Identities=29%  Similarity=0.436  Sum_probs=143.2

Q ss_pred             eeEeeecCCCChHHHHHhh-cCCCC-CHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecC--CCCCEEEeeccc
Q 014171           40 LRRIRLCEGGELLDRILAK-KDSRY-TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK--EDSSLKATDFGL  115 (429)
Q Consensus        40 ~lv~e~~~gg~L~~~l~~~-~~~~l-~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~--~~~~~kL~Dfg~  115 (429)
                      |++.|+|. -+|.+++... ..... .....+.++.|+++||++||+.+||||||||.|||++..+  ....++|+|||+
T Consensus       579 YIalELC~-~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfgl  657 (903)
T KOG1027|consen  579 YIALELCA-CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGL  657 (903)
T ss_pred             EEEehHhh-hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEeccccc
Confidence            57899998 4999988553 11111 1245688999999999999999999999999999999743  235789999999


Q ss_pred             ceeccCCCc----ccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhC-CCCCCCCChhHHHHHHHhcCCCCCCC
Q 014171          116 SDFIKPGKK----FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCG-RRPFWDKTEDGIFKEVLRNKPDFRRK  189 (429)
Q Consensus       116 a~~~~~~~~----~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g-~~pf~~~~~~~~~~~i~~~~~~~~~~  189 (429)
                      ++.+..+..    ..+..||-+|+|||++... .+.++||+|+||++|+.++| .+||...-  +...+|+.+......-
T Consensus       658 sKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~--~R~~NIl~~~~~L~~L  735 (903)
T KOG1027|consen  658 SKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSL--ERQANILTGNYTLVHL  735 (903)
T ss_pred             ccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchH--HhhhhhhcCccceeee
Confidence            998865432    4567899999999999754 47789999999999999986 89995433  3334566666544321


Q ss_pred             CCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          190 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       190 ~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      .. ....++++||.+|++++|..||+|.++|.||+|=..
T Consensus       736 ~~-~~d~eA~dLI~~ml~~dP~~RPsa~~VL~HPlFW~~  773 (903)
T KOG1027|consen  736 EP-LPDCEAKDLISRMLNPDPQLRPSATDVLNHPLFWDS  773 (903)
T ss_pred             cc-CchHHHHHHHHHhcCCCcccCCCHHHHhCCCccCCh
Confidence            11 111289999999999999999999999999998653

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.95  E-value=5.2e-27  Score=232.81  Aligned_cols=187  Identities=25%  Similarity=0.258  Sum_probs=140.0

Q ss_pred             ccceeEeeecCCCChHHHHHhhc----------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCC
Q 014171           37 LRKLRRIRLCEGGELLDRILAKK----------------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKP   94 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~----------------------~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp   94 (429)
                      ...|+|+||+.+|+|.+++....                      ...+++..+..++.|++.||.|||+.+|+||||||
T Consensus       258 ~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp  337 (507)
T PLN03224        258 GSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQDKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKP  337 (507)
T ss_pred             CceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCch
Confidence            34689999999999999886431                      12245678889999999999999999999999999


Q ss_pred             CcEEEeecCCCCCEEEeecccceeccCCCccccc--ccCCcccccccccCC---------------------C--CCCcc
Q 014171           95 ENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI--VGSAYYVAPEVLKRK---------------------S--GPESD  149 (429)
Q Consensus        95 ~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~--~g~~~y~aPE~~~~~---------------------~--~~~~D  149 (429)
                      +||+++   .++.+||+|||++............  .+++.|+|||.+...                     +  ..+.|
T Consensus       338 ~NILl~---~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~D  414 (507)
T PLN03224        338 ENLLVT---VDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFD  414 (507)
T ss_pred             HhEEEC---CCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccc
Confidence            999998   4678999999999765433322222  347899999987431                     1  12469


Q ss_pred             hHHHHHHHHHHhhCCC-CCCCCCh-----------hHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCc---cCcC
Q 014171          150 VWSIGVITYILLCGRR-PFWDKTE-----------DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDP---RARL  214 (429)
Q Consensus       150 iwslG~il~~l~~g~~-pf~~~~~-----------~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp---~~R~  214 (429)
                      +||+||++++|++|.. ||.+...           ...+..+.....  ....+...++..++|+.+||..+|   .+|+
T Consensus       415 vwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~~~~~--~~~~~d~~s~~~~dLi~~LL~~~~~~~~~Rl  492 (507)
T PLN03224        415 SYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYKGQKY--DFSLLDRNKEAGWDLACKLITKRDQANRGRL  492 (507)
T ss_pred             hhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhcccCC--CcccccccChHHHHHHHHHhccCCCCcccCC
Confidence            9999999999999876 6643211           111122222232  233456789999999999999766   7899


Q ss_pred             CHHHHhCCCccccC
Q 014171          215 TAAQALSHPWVREG  228 (429)
Q Consensus       215 s~~e~l~h~~~~~~  228 (429)
                      |++|+|+||||...
T Consensus       493 Sa~eaL~Hp~f~~~  506 (507)
T PLN03224        493 SVGQALSHRFFLPE  506 (507)
T ss_pred             CHHHHhCCCCcCCC
Confidence            99999999999653

>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.95  E-value=9.8e-28  Score=232.70  Aligned_cols=201  Identities=22%  Similarity=0.302  Sum_probs=164.8

Q ss_pred             ccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 014171            8 DTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGL   87 (429)
Q Consensus         8 ~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i   87 (429)
                      .++|+|.++++++|-.             ....||+|+|.+|+|++.|.+.+...|....+..|+.||+.|+.||.++++
T Consensus       167 ~L~H~hliRLyGvVl~-------------qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrl  233 (1039)
T KOG0199|consen  167 KLQHPHLIRLYGVVLD-------------QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRL  233 (1039)
T ss_pred             hccCcceeEEeeeecc-------------chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhh
Confidence            4556666665554432             223468999999999999988667889999999999999999999999999


Q ss_pred             eecCCCCCcEEEeecCCCCCEEEeecccceeccCCCccccccc----CCccccccccc-CCCCCCcchHHHHHHHHHHhh
Q 014171           88 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG----SAYYVAPEVLK-RKSGPESDVWSIGVITYILLC  162 (429)
Q Consensus        88 ~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g----~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~  162 (429)
                      |||||-..|+++..   ...|||+|||+.+.+..+.......+    ...|+|||.+. ..++.++|+|++||++|||++
T Consensus       234 vHRDLAARNlllas---prtVKI~DFGLmRaLg~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFt  310 (1039)
T KOG0199|consen  234 VHRDLAARNLLLAS---PRTVKICDFGLMRALGENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFT  310 (1039)
T ss_pred             hhhhhhhhhheecc---cceeeeecccceeccCCCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhc
Confidence            99999999999984   67899999999998876655433222    45799999997 578999999999999999998


Q ss_pred             -CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcccc
Q 014171          163 -GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE  227 (429)
Q Consensus       163 -g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~  227 (429)
                       |..||.|.....++++|-.+. .++++  +.+++++.+++..||..+|.+|||+..+.+.-+..+
T Consensus       311 yGEePW~G~~g~qIL~~iD~~e-rLpRP--k~csedIY~imk~cWah~paDRptFsair~~~~l~e  373 (1039)
T KOG0199|consen  311 YGEEPWVGCRGIQILKNIDAGE-RLPRP--KYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLAE  373 (1039)
T ss_pred             cCCCCCCCCCHHHHHHhccccc-cCCCC--CCChHHHHHHHHHhccCCccccccHHHHHHhHHHHh
Confidence             889999999999998887443 33332  468999999999999999999999998765544443

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.94  E-value=4.5e-27  Score=204.62  Aligned_cols=163  Identities=26%  Similarity=0.323  Sum_probs=127.8

Q ss_pred             CChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCccccc
Q 014171           49 GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI  128 (429)
Q Consensus        49 g~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~  128 (429)
                      |+|.+++.++ +..+++.+++.++.||+.||.|||+++      ||+||+++   .++.+++  ||.+.......    .
T Consensus         1 GsL~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~---~~~~~~~--fG~~~~~~~~~----~   64 (176)
T smart00750        1 VSLADILEVR-GRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLT---WDGLLKL--DGSVAFKTPEQ----S   64 (176)
T ss_pred             CcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEc---Cccceee--ccceEeecccc----C
Confidence            7899988654 357999999999999999999999998      99999998   5778888  99987654332    2


Q ss_pred             ccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChh-HHHHHHHhcCCCCCC---CCCCCCCH--HHHHH
Q 014171          129 VGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLRNKPDFRR---KPWPSISN--SAKDF  201 (429)
Q Consensus       129 ~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~---~~~~~~~~--~~~~l  201 (429)
                      .|++.|+|||++.+ .++.++||||+||++|+|++|+.||...... .....+.........   .....++.  .++++
T Consensus        65 ~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  144 (176)
T smart00750       65 RVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDRSNLESVSAARSFADF  144 (176)
T ss_pred             CCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCccccccHHHHHhhhhHHHH
Confidence            68899999999864 5688999999999999999999999765432 333333332222111   11122333  69999


Q ss_pred             HHHhccCCccCcCCHHHHhCCCcccc
Q 014171          202 VKKLLVKDPRARLTAAQALSHPWVRE  227 (429)
Q Consensus       202 i~~~l~~dp~~R~s~~e~l~h~~~~~  227 (429)
                      |.+||..+|.+||++.++++|+|+..
T Consensus       145 i~~cl~~~p~~Rp~~~~ll~~~~~~~  170 (176)
T smart00750      145 MRVCASRLPQRREAANHYLAHCRALF  170 (176)
T ss_pred             HHHHHhcccccccCHHHHHHHHHHHH
Confidence            99999999999999999999999754

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.94  E-value=5.6e-28  Score=210.91  Aligned_cols=211  Identities=27%  Similarity=0.408  Sum_probs=163.7

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH   85 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~   85 (429)
                      +...+|.|.+..+.|++.-     +...+  -+.|+|+|++. .+|...+.+-  ..++...+.-++.||++||+|||+.
T Consensus       106 LcfFkHdNVLSaLDILQPp-----h~dfF--qEiYV~TELmQ-SDLHKIIVSP--Q~Ls~DHvKVFlYQILRGLKYLHsA  175 (449)
T KOG0664|consen  106 LSSFRHDNVLSLLDILQPA-----NPSFF--QELYVLTELMQ-SDLHKIIVSP--QALTPDHVKVFVYQILRGLKYLHTA  175 (449)
T ss_pred             HHhhccccHHHHHHhcCCC-----CchHH--HHHHHHHHHHH-hhhhheeccC--CCCCcchhhhhHHHHHhhhHHHhhc
Confidence            4578899999999999861     22222  23467888886 6888877544  6899999999999999999999999


Q ss_pred             CCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc--ccccccCCcccccccccC--CCCCCcchHHHHHHHHHHh
Q 014171           86 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILL  161 (429)
Q Consensus        86 ~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~--~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~  161 (429)
                      ||.||||||.|.|++   .+..+||||||+|+.......  ....+-|.+|+|||++-+  .|+.+.||||+||++.|++
T Consensus       176 ~ILHRDIKPGNLLVN---SNCvLKICDFGLARvee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELL  252 (449)
T KOG0664|consen  176 NILHRDIKPGNLLVN---SNCILKICDFGLARTWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELL  252 (449)
T ss_pred             chhhccCCCccEEec---cCceEEecccccccccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHH
Confidence            999999999999999   478899999999987654332  334466889999999965  5799999999999999999


Q ss_pred             hCCCCCCCCChhHHHHHHHhc--CCCC-------------------CCCCCC---------CCCHHHHHHHHHhccCCcc
Q 014171          162 CGRRPFWDKTEDGIFKEVLRN--KPDF-------------------RRKPWP---------SISNSAKDFVKKLLVKDPR  211 (429)
Q Consensus       162 ~g~~pf~~~~~~~~~~~i~~~--~~~~-------------------~~~~~~---------~~~~~~~~li~~~l~~dp~  211 (429)
                      -.+..|...++.+.+..|..-  .+..                   ..+..+         .-..+...++..+|..||+
T Consensus       253 gRrILFQAq~PiqQL~lItdLLGTPs~EaMr~ACEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~d  332 (449)
T KOG0664|consen  253 QRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYACEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPD  332 (449)
T ss_pred             hhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHhhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCc
Confidence            999999887776655544321  1100                   000000         1124567889999999999


Q ss_pred             CcCCHHHHhCCCccccCC
Q 014171          212 ARLTAAQALSHPWVREGG  229 (429)
Q Consensus       212 ~R~s~~e~l~h~~~~~~~  229 (429)
                      +|++..+++.|++..+..
T Consensus       333 kris~~~A~~~~~~~e~R  350 (449)
T KOG0664|consen  333 KRISVEEALQHRYLEEGR  350 (449)
T ss_pred             ccccHhhhcccccccccc
Confidence            999999999999988764

>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]

Probab=99.94  E-value=1.3e-27  Score=234.63  Aligned_cols=198  Identities=24%  Similarity=0.407  Sum_probs=167.8

Q ss_pred             eecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 014171            5 LIGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL   84 (429)
Q Consensus         5 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~   84 (429)
                      +|+++.|||++++-+++...    .+.+        +|+|||++|+|-.+|..+ ++.++..++..+++-|+.|++||-+
T Consensus       683 IMGQFdHPNIIrLEGVVTks----~PvM--------IiTEyMENGsLDsFLR~~-DGqftviQLVgMLrGIAsGMkYLsd  749 (996)
T KOG0196|consen  683 IMGQFDHPNIIRLEGVVTKS----KPVM--------IITEYMENGSLDSFLRQN-DGQFTVIQLVGMLRGIASGMKYLSD  749 (996)
T ss_pred             hcccCCCCcEEEEEEEEecC----ceeE--------EEhhhhhCCcHHHHHhhc-CCceEeehHHHHHHHHHHHhHHHhh
Confidence            57888999999988888762    2222        568999999999999765 4779999999999999999999999


Q ss_pred             CCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCC--ccccccc--CCccccccccc-CCCCCCcchHHHHHHHHH
Q 014171           85 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK--KFQDIVG--SAYYVAPEVLK-RKSGPESDVWSIGVITYI  159 (429)
Q Consensus        85 ~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~--~~~~~~g--~~~y~aPE~~~-~~~~~~~DiwslG~il~~  159 (429)
                      .|+|||||-..|||++   .+..+|++|||+++.+....  .+.+..|  ..+|.|||.+. .+++.++||||+|+++||
T Consensus       750 m~YVHRDLAARNILVN---snLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWE  826 (996)
T KOG0196|consen  750 MNYVHRDLAARNILVN---SNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWE  826 (996)
T ss_pred             cCchhhhhhhhheeec---cceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEE
Confidence            9999999999999999   47889999999999775433  2233333  46899999986 678999999999999999


Q ss_pred             Hhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          160 LLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       160 l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      .++ |..|||..+.++.+..|..+-. +  +++.+++..+..|+..||++|-.+||.+.+++.
T Consensus       827 VmSyGERPYWdmSNQdVIkaIe~gyR-L--PpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~  886 (996)
T KOG0196|consen  827 VMSYGERPYWDMSNQDVIKAIEQGYR-L--PPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVS  886 (996)
T ss_pred             ecccCCCcccccchHHHHHHHHhccC-C--CCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHH
Confidence            765 9999999999999998887753 2  333579999999999999999999999999874

>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]

Probab=99.94  E-value=8.1e-27  Score=222.38  Aligned_cols=200  Identities=18%  Similarity=0.246  Sum_probs=157.5

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH   85 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~   85 (429)
                      +.+++|||++++++.+..            +...++|+||++.|+|.+++..+.-....-.....++.||++|++||.+.
T Consensus       589 LsqLkhPNIveLvGVC~~------------DePicmI~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~  656 (807)
T KOG1094|consen  589 LSRLKHPNIVELLGVCVQ------------DDPLCMITEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESL  656 (807)
T ss_pred             HhccCCCCeeEEEeeeec------------CCchHHHHHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhh
Confidence            456788888888885543            22334678999999999999876333345556677999999999999999


Q ss_pred             CCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCccc---ccccCCcccccccc-cCCCCCCcchHHHHHHHHHHh
Q 014171           86 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ---DIVGSAYYVAPEVL-KRKSGPESDVWSIGVITYILL  161 (429)
Q Consensus        86 ~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~---~~~g~~~y~aPE~~-~~~~~~~~DiwslG~il~~l~  161 (429)
                      ++|||||.+.|+|++   .+.++|++|||+++.+-.+..+.   ..+-..+|+|+|.+ .++++.++|+|++|+++||++
T Consensus       657 nfVHrd~a~rNcLv~---~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~  733 (807)
T KOG1094|consen  657 NFVHRDLATRNCLVD---GEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVF  733 (807)
T ss_pred             chhhccccccceeec---CcccEEecCcccccccccCCceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHH
Confidence            999999999999999   68999999999999775554432   22346789999976 588999999999999999976


Q ss_pred             h--CCCCCCCCChhHHHHHHHhcCCCCCC----CCCCCCCHHHHHHHHHhccCCccCcCCHHHHh
Q 014171          162 C--GRRPFWDKTEDGIFKEVLRNKPDFRR----KPWPSISNSAKDFVKKLLVKDPRARLTAAQAL  220 (429)
Q Consensus       162 ~--g~~pf~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l  220 (429)
                      +  ...||...+++...+....-......    ..++-++..+.+++.+||+.+..+||+++++-
T Consensus       734 ~~C~e~Py~~lt~e~vven~~~~~~~~~~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh  798 (807)
T KOG1094|consen  734 MLCREQPYSQLTDEQVVENAGEFFRDQGRQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLH  798 (807)
T ss_pred             HHHhhCchhhhhHHHHHHhhhhhcCCCCcceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHH
Confidence            4  78999888888777665443322221    12345788899999999999999999999874

>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]

Probab=99.93  E-value=2.5e-25  Score=228.17  Aligned_cols=196  Identities=21%  Similarity=0.311  Sum_probs=156.4

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhc------------C--CCCCHHHHHHHH
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKK------------D--SRYTEKDAAVVV   72 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~------------~--~~l~~~~~~~i~   72 (429)
                      .-.+|+|++++++.+..            ....++|+|||..|+|..++.+.+            .  ..++......++
T Consensus       357 ~~g~H~niv~llG~~t~------------~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa  424 (609)
T KOG0200|consen  357 ELGKHPNIVNLLGACTQ------------DGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFA  424 (609)
T ss_pred             HhcCCcchhhheeeecc------------CCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHH
Confidence            34567777777775553            334457899999999999997765            0  138999999999


Q ss_pred             HHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccc--ccc--CCcccccccccC-CCCCC
Q 014171           73 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD--IVG--SAYYVAPEVLKR-KSGPE  147 (429)
Q Consensus        73 ~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~--~~g--~~~y~aPE~~~~-~~~~~  147 (429)
                      .||+.|++||++.+++||||-..|||++   .+..+|++|||+|+.......+..  ..+  ...|+|||.+.. .++.+
T Consensus       425 ~QIa~GMe~L~~~~~vHRDLAaRNVLi~---~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~k  501 (609)
T KOG0200|consen  425 YQIANGMEYLASVPCVHRDLAARNVLIT---KNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSK  501 (609)
T ss_pred             HHHHHHHHHHhhCCccchhhhhhhEEec---CCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCccccc
Confidence            9999999999999999999999999999   578999999999986554443321  122  345999999975 56999


Q ss_pred             cchHHHHHHHHHHhh-CCCCCCCCC-hhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHh
Q 014171          148 SDVWSIGVITYILLC-GRRPFWDKT-EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL  220 (429)
Q Consensus       148 ~DiwslG~il~~l~~-g~~pf~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l  220 (429)
                      +||||+||+|||+++ |..||.+.. ..+....+..+.. ...  +..++.++.+++..||+.+|.+||++.++.
T Consensus       502 SDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~r-~~~--P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~  573 (609)
T KOG0200|consen  502 SDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGNR-MEQ--PEHCSDEIYDLMKSCWNADPEDRPTFSECV  573 (609)
T ss_pred             chhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCCC-CCC--CCCCCHHHHHHHHHHhCCCcccCCCHHHHH
Confidence            999999999999998 889998855 5556555555543 222  245799999999999999999999999876

>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.92  E-value=5.1e-25  Score=206.35  Aligned_cols=78  Identities=23%  Similarity=0.310  Sum_probs=66.4

Q ss_pred             ccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCC
Q 014171           14 CLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDM   92 (429)
Q Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~-~~i~H~di   92 (429)
                      ++.++..+.+.++.+.|++.|        +|+. |-+|+.+|....-..++...++.|++||+.||.|||. +||+|.||
T Consensus       144 VV~LlD~FkhsGpNG~HVCMV--------fEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDl  214 (590)
T KOG1290|consen  144 VVQLLDHFKHSGPNGQHVCMV--------FEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDL  214 (590)
T ss_pred             eeeeeccceecCCCCcEEEEE--------ehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCC
Confidence            567777777777777666655        5666 7899999988777889999999999999999999997 69999999


Q ss_pred             CCCcEEEe
Q 014171           93 KPENFLFK  100 (429)
Q Consensus        93 kp~Nil~~  100 (429)
                      ||+|||+.
T Consensus       215 KPENvLl~  222 (590)
T KOG1290|consen  215 KPENVLLC  222 (590)
T ss_pred             Ccceeeee
Confidence            99999974

>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]

Probab=99.92  E-value=5.1e-25  Score=185.15  Aligned_cols=143  Identities=24%  Similarity=0.331  Sum_probs=117.9

Q ss_pred             cceeEeeecCCCChHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCcEEEeecCCCCCEEEeecc
Q 014171           38 RKLRRIRLCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDSSLKATDFG  114 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~--~~~~~l~~~~~~~i~~qil~aL~~lH~~-~i~H~dikp~Nil~~~~~~~~~~kL~Dfg  114 (429)
                      ..++.||.+. -||..+..+  .+++..+|..+-+++..|+.||.|||++ .++|||+||+|||++   ..+++|+||||
T Consensus       119 dvwIcME~M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn---~~GqVKiCDFG  194 (282)
T KOG0984|consen  119 DVWICMELMD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILIN---YDGQVKICDFG  194 (282)
T ss_pred             cEEEeHHHhh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEc---cCCcEEEcccc
Confidence            3578889987 466555533  3678899999999999999999999985 899999999999999   68999999999


Q ss_pred             cceeccCCCcccccccCCcccccccccC-----CCCCCcchHHHHHHHHHHhhCCCCCCC-CChhHHHHHHHhcCC
Q 014171          115 LSDFIKPGKKFQDIVGSAYYVAPEVLKR-----KSGPESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKP  184 (429)
Q Consensus       115 ~a~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~DiwslG~il~~l~~g~~pf~~-~~~~~~~~~i~~~~~  184 (429)
                      ++..+...-..+...|...|+|||.+..     .|+-++||||||+++.||.+++.||.. .++.+.+..+.....
T Consensus       195 IsG~L~dSiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVeep~  270 (282)
T KOG0984|consen  195 ISGYLVDSIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEEPS  270 (282)
T ss_pred             cceeehhhhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcCCC
Confidence            9987765555455678899999999853     568899999999999999999999954 456666776665543

>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]

Probab=99.91  E-value=2.6e-24  Score=177.06  Aligned_cols=142  Identities=30%  Similarity=0.524  Sum_probs=128.9

Q ss_pred             hhcccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhh
Q 014171          261 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL  340 (429)
Q Consensus       261 ~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~  340 (429)
                      ....++++++++++++|..+|.|++|.|+..||..+| +++|..+++.++.+|++.+|. +.|.|+|.+|+.++......
T Consensus        10 ~~~~~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~il-r~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~   87 (160)
T COG5126          10 TFTQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKIL-RSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLKR   87 (160)
T ss_pred             hcccCCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHH-HHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhcc
Confidence            3467799999999999999999999999999999999 479999999999999999999 89999999999998766543


Q ss_pred             cccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          341 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       341 ~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                      ...     .++++.||+.||+|++|+|+..||+.+++.+|+      ++.+++.+|.|+||.|+|+||++++...
T Consensus        88 ~~~-----~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~~deev~~ll~~~d~d~dG~i~~~eF~~~~~~~  157 (160)
T COG5126          88 GDK-----EEELREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIKDS  157 (160)
T ss_pred             CCc-----HHHHHHHHHHhCCCCCceecHHHHHHHHHhhcccCCHHHHHHHHHhcCCCCCceEeHHHHHHHHhcc
Confidence            221     357999999999999999999999999999985      9999999999999999999999988654

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.91  E-value=1.2e-24  Score=237.50  Aligned_cols=192  Identities=18%  Similarity=0.237  Sum_probs=135.2

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH---
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH---   83 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH---   83 (429)
                      +.++|+|++.+++++..            +...|+|||||+||+|.+++.     .+++..+..++.||+.||+|||   
T Consensus       738 ~~l~HpnIv~~~~~~~~------------~~~~~lv~Ey~~~g~L~~~l~-----~l~~~~~~~i~~~ia~~L~yLH~~~  800 (968)
T PLN00113        738 GKLQHPNIVKLIGLCRS------------EKGAYLIHEYIEGKNLSEVLR-----NLSWERRRKIAIGIAKALRFLHCRC  800 (968)
T ss_pred             hhCCCCCcceEEEEEEc------------CCCCEEEEeCCCCCcHHHHHh-----cCCHHHHHHHHHHHHHHHHHhccCC
Confidence            34566776666665432            223478999999999999983     4889999999999999999999   


Q ss_pred             HCCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh
Q 014171           84 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC  162 (429)
Q Consensus        84 ~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~  162 (429)
                      +.+|+||||||+||+++.   ....++. +|.+......   ....+++.|+|||++.+ .++.++||||+||++|||+|
T Consensus       801 ~~~iiH~dlkp~Nil~~~---~~~~~~~-~~~~~~~~~~---~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~t  873 (968)
T PLN00113        801 SPAVVVGNLSPEKIIIDG---KDEPHLR-LSLPGLLCTD---TKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLT  873 (968)
T ss_pred             CCCeecCCCCHHhEEECC---CCceEEE-eccccccccC---CCccccccccCcccccCCCCCcccchhhHHHHHHHHHh
Confidence            669999999999999983   4555554 5544332211   23367899999999864 46899999999999999999


Q ss_pred             CCCCCCCCCh--hHHHH--HHHhcC--------CCCCCC--CCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          163 GRRPFWDKTE--DGIFK--EVLRNK--------PDFRRK--PWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       163 g~~pf~~~~~--~~~~~--~i~~~~--------~~~~~~--~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      |+.||.....  .....  ......        +.....  .......++.+++.+||+.||.+|||+.++++.
T Consensus       874 g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~  947 (968)
T PLN00113        874 GKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKT  947 (968)
T ss_pred             CCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHH
Confidence            9999853221  11111  110000        000000  000112356789999999999999999999854

>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]

Probab=99.91  E-value=6e-25  Score=212.70  Aligned_cols=207  Identities=27%  Similarity=0.396  Sum_probs=168.8

Q ss_pred             eecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 014171            5 LIGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL   84 (429)
Q Consensus         5 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~   84 (429)
                      ++++.+|+|++-.++.+-.            ...-++.||||.||+|.+..  +-.+.+++-++....+..+.||+|||+
T Consensus        65 ~~~dc~h~nivay~gsylr------------~dklwicMEycgggslQdiy--~~TgplselqiayvcRetl~gl~ylhs  130 (829)
T KOG0576|consen   65 MLRDCRHPNIVAYFGSYLR------------RDKLWICMEYCGGGSLQDIY--HVTGPLSELQIAYVCRETLQGLKYLHS  130 (829)
T ss_pred             eeecCCCcChHHHHhhhhh------------hcCcEEEEEecCCCccccee--eecccchhHHHHHHHhhhhccchhhhc
Confidence            4678888888766653221            34457899999999999977  444889999999999999999999999


Q ss_pred             CCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCC-cccccccCCcccccccc----cCCCCCCcchHHHHHHHHH
Q 014171           85 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYI  159 (429)
Q Consensus        85 ~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~~----~~~~~~~~DiwslG~il~~  159 (429)
                      .|-+|||||-.||+++   +.+.+||.|||.+..+...- +.....||++|+|||+.    ++.|++.+|+|++|+...+
T Consensus       131 ~gk~hRdiKGanillt---d~gDvklaDfgvsaqitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAie  207 (829)
T KOG0576|consen  131 QGKIHRDIKGANILLT---DEGDVKLADFGVSAQITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIE  207 (829)
T ss_pred             CCcccccccccceeec---ccCceeecccCchhhhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhh
Confidence            9999999999999999   58899999999987775432 34567999999999987    3678999999999999999


Q ss_pred             HhhCCCCCCCCChhHHHHHHHhcCCCCCC-CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          160 LLCGRRPFWDKTEDGIFKEVLRNKPDFRR-KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       160 l~~g~~pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      +..-++|....-+......+....+..+. .....-++.+.+|++.+|-.+|++||+++.+|+|||....
T Consensus       208 l~eLqpplfdlhpmr~l~LmTkS~~qpp~lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~  277 (829)
T KOG0576|consen  208 LGELQPPLFDLHPMRALFLMTKSGFQPPTLKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT  277 (829)
T ss_pred             hhhcCCcccccchHHHHHHhhccCCCCCcccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeeccc
Confidence            99999998776666555555554443322 2223457889999999999999999999999999998654

>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]

Probab=99.91  E-value=1.1e-24  Score=201.45  Aligned_cols=183  Identities=30%  Similarity=0.476  Sum_probs=138.0

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      ..+|+||++.-...+++     ..++..+++.+++.++.||.++|.+|||||||||+|++++.  ..+.-.|+|||+|..
T Consensus       110 v~ivlp~~~H~~f~~l~-----~~l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~--~t~rg~LvDFgLA~~  182 (418)
T KOG1167|consen  110 VAIVLPYFEHDRFRDLY-----RSLSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNR--RTQRGVLVDFGLAQR  182 (418)
T ss_pred             eEEEecccCccCHHHHH-----hcCCHHHHHHHHHHHHHHhhhhhccCccccCCCcccccccc--ccCCceEEechhHHH
Confidence            45789999999999888     35779999999999999999999999999999999999996  567789999999862


Q ss_pred             cc-----------------C-CC----------------c-----------ccccccCCcccccccccC--CCCCCcchH
Q 014171          119 IK-----------------P-GK----------------K-----------FQDIVGSAYYVAPEVLKR--KSGPESDVW  151 (429)
Q Consensus       119 ~~-----------------~-~~----------------~-----------~~~~~g~~~y~aPE~~~~--~~~~~~Diw  151 (429)
                      ..                 + .+                .           .....||++|.|||++-+  ..++++|||
T Consensus       183 ~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiw  262 (418)
T KOG1167|consen  183 YDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIW  262 (418)
T ss_pred             HHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCcccee
Confidence            10                 0 00                0           013468999999999965  348899999


Q ss_pred             HHHHHHHHHhhCCCCCCCCChh-HHH------------HH--HHhcC-------------------CCC-----------
Q 014171          152 SIGVITYILLCGRRPFWDKTED-GIF------------KE--VLRNK-------------------PDF-----------  186 (429)
Q Consensus       152 slG~il~~l~~g~~pf~~~~~~-~~~------------~~--i~~~~-------------------~~~-----------  186 (429)
                      |.||++..++++..||...... ..+            ++  ...+.                   ...           
T Consensus       263 s~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~  342 (418)
T KOG1167|consen  263 SAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQP  342 (418)
T ss_pred             eccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccccccc
Confidence            9999999999999999543321 000            00  00011                   000           


Q ss_pred             --CCCCCCC-CCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          187 --RRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       187 --~~~~~~~-~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                        ....+.+ .+..+.+|+.+||..||.+|+|++++|+||||...
T Consensus       343 n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkHpFF~~~  387 (418)
T KOG1167|consen  343 NTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKHPFFDEA  387 (418)
T ss_pred             ceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcCcCCcch
Confidence              0011111 24478999999999999999999999999999853

>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]

Probab=99.91  E-value=2.2e-24  Score=212.97  Aligned_cols=195  Identities=23%  Similarity=0.292  Sum_probs=163.1

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH   85 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~   85 (429)
                      |..++|+|.+++++++....        .     -||++|+++|+|++++..++ +.+.......|..||++|+.|||.+
T Consensus       752 masldHpnl~RLLgvc~~s~--------~-----qlvtq~mP~G~LlDyvr~hr-~~igsq~lLnw~~QIAkgM~YLe~q  817 (1177)
T KOG1025|consen  752 MASLDHPNLLRLLGVCMLST--------L-----QLVTQLMPLGCLLDYVREHR-DNIGSQDLLNWCYQIAKGMKYLEEQ  817 (1177)
T ss_pred             HhcCCCchHHHHhhhcccch--------H-----HHHHHhcccchHHHHHHHhh-ccccHHHHHHHHHHHHHHHHHHHhc
Confidence            56789999999999877521        1     25789999999999998775 6788889999999999999999999


Q ss_pred             CCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCccccc---ccCCccccccccc-CCCCCCcchHHHHHHHHHHh
Q 014171           86 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI---VGSAYYVAPEVLK-RKSGPESDVWSIGVITYILL  161 (429)
Q Consensus        86 ~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~---~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~  161 (429)
                      ++|||||-..|+|+.   ...++|+.|||+|+...........   .-.+.|+|-|.+. ..+++++||||+||++||++
T Consensus       818 rlVHrdLaaRNVLVk---sP~hvkitdfgla~ll~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElm  894 (1177)
T KOG1025|consen  818 RLVHRDLAARNVLVK---SPNHVKITDFGLAKLLAPDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELM  894 (1177)
T ss_pred             chhhhhhhhhheeec---CCCeEEEEecchhhccCcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHH
Confidence            999999999999999   4789999999999988765543222   2245688888775 56799999999999999999


Q ss_pred             h-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHh
Q 014171          162 C-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL  220 (429)
Q Consensus       162 ~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l  220 (429)
                      | |..|+.+....++-..+..+.. ++  .++..+-++.-++.+||..|+..||+++++.
T Consensus       895 TFGa~Py~gi~~~eI~dlle~geR-Ls--qPpiCtiDVy~~mvkCwmid~~~rp~fkel~  951 (1177)
T KOG1025|consen  895 TFGAKPYDGIPAEEIPDLLEKGER-LS--QPPICTIDVYMVMVKCWMIDADSRPTFKELA  951 (1177)
T ss_pred             hcCCCccCCCCHHHhhHHHhcccc-CC--CCCCccHHHHHHHHHHhccCcccCccHHHHH
Confidence            8 9999999888887776666654 32  3356899999999999999999999998864

>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]

Probab=99.91  E-value=1.5e-23  Score=191.72  Aligned_cols=199  Identities=17%  Similarity=0.195  Sum_probs=159.3

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcC------CCCCHHHHHHHHHHHHHHH
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKD------SRYTEKDAAVVVRQMLRVA   79 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~------~~l~~~~~~~i~~qil~aL   79 (429)
                      +..+.|+|.+...++...           .-..+++++.+...|+|..++...++      ..++..+...++.|+..|+
T Consensus       341 ly~~sH~nll~V~~V~ie-----------~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am  409 (563)
T KOG1024|consen  341 LYGASHPNLLSVLGVSIE-----------DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAM  409 (563)
T ss_pred             HhcCcCCCccceeEEEee-----------ccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHH
Confidence            456678888777765543           11223446678889999999974432      3477888899999999999


Q ss_pred             HHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcc---cccccCCccccccccc-CCCCCCcchHHHHH
Q 014171           80 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLK-RKSGPESDVWSIGV  155 (429)
Q Consensus        80 ~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~---~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~  155 (429)
                      .|||+.|++|.||-..|++++   +..++||+|=.+++.+-+....   ...-....|||||.+. ..++.++|+|||||
T Consensus       410 ~hlh~~~ViHkDiAaRNCvId---d~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGV  486 (563)
T KOG1024|consen  410 EHLHNHGVIHKDIAARNCVID---DQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGV  486 (563)
T ss_pred             HHHHhcCcccchhhhhcceeh---hheeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHH
Confidence            999999999999999999999   5789999999888866443321   1222356799999986 56799999999999


Q ss_pred             HHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          156 ITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       156 il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ++|||+| |+.|+...++.++...+..+..-   ..+.++++++-.++..||...|++||+++|+..
T Consensus       487 llWELmtlg~~PyaeIDPfEm~~ylkdGyRl---aQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~  550 (563)
T KOG1024|consen  487 LLWELMTLGKLPYAEIDPFEMEHYLKDGYRL---AQPFNCPDELFTVMACCWALLPEERPSFSQLVI  550 (563)
T ss_pred             HHHHHHhcCCCCccccCHHHHHHHHhcccee---cCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHH
Confidence            9999998 99999999999998888777532   223578999999999999999999999999763

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.90  E-value=9.9e-25  Score=221.15  Aligned_cols=182  Identities=29%  Similarity=0.446  Sum_probs=146.6

Q ss_pred             EeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccceeccC
Q 014171           42 RIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP  121 (429)
Q Consensus        42 v~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~  121 (429)
                      +||||++ +|..++.+.  +.++..++-++++|++.|++|+|..||.|||+||+|++++   ..+.+|++|||.+.....
T Consensus       399 ~mE~~~~-Dlf~~~~~~--~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~---~~g~lki~Dfg~~~vf~~  472 (601)
T KOG0590|consen  399 SMEYCPY-DLFSLVMSN--GKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVT---ENGILKIIDFGAASVFRY  472 (601)
T ss_pred             hhhcccH-HHHHHHhcc--cccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEe---cCCceEEeecCcceeecc
Confidence            4899998 999999655  6799999999999999999999999999999999999999   578999999998875532


Q ss_pred             CC-----cccccccCCcccccccccCC-C-CCCcchHHHHHHHHHHhhCCCCCCCCChhHHH--HHHHhc---CCCCCCC
Q 014171          122 GK-----KFQDIVGSAYYVAPEVLKRK-S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIF--KEVLRN---KPDFRRK  189 (429)
Q Consensus       122 ~~-----~~~~~~g~~~y~aPE~~~~~-~-~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~--~~i~~~---~~~~~~~  189 (429)
                      ..     .....+|+..|+|||++.+. | ....||||+|++++.|.+|+.||.........  ......   ...-+..
T Consensus       473 ~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~~~~~~~~~~~~~~~~~  552 (601)
T KOG0590|consen  473 PWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFKTNNYSDQRNIFEGPNR  552 (601)
T ss_pred             CcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchhhhccccccccccChHH
Confidence            21     23567899999999999754 4 56799999999999999999999654433221  111111   1111223


Q ss_pred             CCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          190 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       190 ~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      .+..++...+.+|.+||+++|.+|+|++++++.+||+...
T Consensus       553 ~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d~W~~~i~  592 (601)
T KOG0590|consen  553 LLSLLPRETRIIIYRMLQLDPTKRITIEQILNDEWIRSIE  592 (601)
T ss_pred             HHHhchhhHHHHHHHHccCChhheecHHHHhhChHhhhcc
Confidence            3456788899999999999999999999999999999864

>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=99.90  E-value=1.7e-23  Score=176.61  Aligned_cols=143  Identities=29%  Similarity=0.541  Sum_probs=125.8

Q ss_pred             cchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccc
Q 014171          265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD  344 (429)
Q Consensus       265 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~  344 (429)
                      ++..+..+++++|..+|.|++|+|+..||..++ +.+|..++..++..+++.+|.+++|.|+|+||+.++..........
T Consensus         2 ~~~~~~~el~~~F~~fD~d~~G~i~~~el~~~l-r~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~   80 (151)
T KOG0027|consen    2 LSEEQILELKEAFQLFDKDGDGKISVEELGAVL-RSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDE   80 (151)
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCcccHHHHHHHH-HHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccccc
Confidence            356778899999999999999999999999999 5699999999999999999999999999999999877554433322


Q ss_pred             cHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          345 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       345 ~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                      . ...+.+++||+.||+|++|+||++||+.++..+|+      ++.+++.+|.|+||.|+|+||+++|...
T Consensus        81 ~-~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~~~e~~~mi~~~d~d~dg~i~f~ef~~~m~~~  150 (151)
T KOG0027|consen   81 E-ASSEELKEAFRVFDKDGDGFISASELKKVLTSLGEKLTDEECKEMIREVDVDGDGKVNFEEFVKMMSGK  150 (151)
T ss_pred             c-ccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHhcC
Confidence            1 11346899999999999999999999999999985      8999999999999999999999999754

>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]

Probab=99.90  E-value=3.1e-23  Score=194.01  Aligned_cols=176  Identities=27%  Similarity=0.364  Sum_probs=135.7

Q ss_pred             cccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---------CCeecCCCCCcEEEeecCCCC
Q 014171           36 PLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH---------GLVHRDMKPENFLFKSAKEDS  106 (429)
Q Consensus        36 ~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~---------~i~H~dikp~Nil~~~~~~~~  106 (429)
                      ...++||++|.+.|+|.++|..+   .+++....+++.-+++||+|||+.         .|+|||||..|||+.   ++.
T Consensus       280 ~~eywLVt~fh~kGsL~dyL~~n---tisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK---~Dl  353 (534)
T KOG3653|consen  280 RMEYWLVTEFHPKGSLCDYLKAN---TISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVK---NDL  353 (534)
T ss_pred             ccceeEEeeeccCCcHHHHHHhc---cccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEc---cCC
Confidence            45678999999999999999665   899999999999999999999964         499999999999999   689


Q ss_pred             CEEEeecccceeccCCCcc---cccccCCcccccccccCCCC-------CCcchHHHHHHHHHHhhCC------------
Q 014171          107 SLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLKRKSG-------PESDVWSIGVITYILLCGR------------  164 (429)
Q Consensus       107 ~~kL~Dfg~a~~~~~~~~~---~~~~g~~~y~aPE~~~~~~~-------~~~DiwslG~il~~l~~g~------------  164 (429)
                      +..|+|||+|..+.++...   -..+||.+|||||++.+..+       .+.||||+|.++|||+++-            
T Consensus       354 TccIaDFGLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yq  433 (534)
T KOG3653|consen  354 TCCIADFGLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQ  433 (534)
T ss_pred             cEEeeccceeEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCccc
Confidence            9999999999988754332   34689999999999976432       2479999999999999842            


Q ss_pred             CCCC-----CCChhHHHHHHHhcCCCC-CCCCCCCC--CHHHHHHHHHhccCCccCcCCHH
Q 014171          165 RPFW-----DKTEDGIFKEVLRNKPDF-RRKPWPSI--SNSAKDFVKKLLVKDPRARLTAA  217 (429)
Q Consensus       165 ~pf~-----~~~~~~~~~~i~~~~~~~-~~~~~~~~--~~~~~~li~~~l~~dp~~R~s~~  217 (429)
                      .||.     ..+.+++...+.....+. .+..|..-  ...+++.+..||..||+.|.|+.
T Consensus       434 lpfe~evG~hPt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~  494 (534)
T KOG3653|consen  434 LPFEAEVGNHPTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAG  494 (534)
T ss_pred             CchhHHhcCCCCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhH
Confidence            2332     123344445454443221 11222211  24588999999999999999985

>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]

Probab=99.90  E-value=3.7e-23  Score=192.11  Aligned_cols=175  Identities=23%  Similarity=0.324  Sum_probs=133.3

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCeecCCCCCcEEEeecCCCCCEEE
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--------GLVHRDMKPENFLFKSAKEDSSLKA  110 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~--------~i~H~dikp~Nil~~~~~~~~~~kL  110 (429)
                      -|||++|.+.|||+++|.++   .++-.....++.-+++||.+||..        .|.|||||..|||+.   +++.+-|
T Consensus       284 LwLvTdYHe~GSL~DyL~r~---tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVK---kn~~C~I  357 (513)
T KOG2052|consen  284 LWLVTDYHEHGSLYDYLNRN---TVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVK---KNGTCCI  357 (513)
T ss_pred             EEEeeecccCCcHHHHHhhc---cCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEc---cCCcEEE
Confidence            46899999999999999654   899999999999999999999963        399999999999999   6899999


Q ss_pred             eecccceeccCCC-----cccccccCCcccccccccCCC-------CCCcchHHHHHHHHHHhhC----------CCCCC
Q 014171          111 TDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVLKRKS-------GPESDVWSIGVITYILLCG----------RRPFW  168 (429)
Q Consensus       111 ~Dfg~a~~~~~~~-----~~~~~~g~~~y~aPE~~~~~~-------~~~~DiwslG~il~~l~~g----------~~pf~  168 (429)
                      +|+|+|.......     ..+..+||.+|||||++....       -..+||||||+++||++..          ++||+
T Consensus       358 ADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyy  437 (513)
T KOG2052|consen  358 ADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYY  437 (513)
T ss_pred             eeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcc
Confidence            9999998665432     235679999999999996432       2458999999999998862          57886


Q ss_pred             CC-----ChhHHHHHHHhcCCCC-CCCCCCCCC--HHHHHHHHHhccCCccCcCCHHHH
Q 014171          169 DK-----TEDGIFKEVLRNKPDF-RRKPWPSIS--NSAKDFVKKLLVKDPRARLTAAQA  219 (429)
Q Consensus       169 ~~-----~~~~~~~~i~~~~~~~-~~~~~~~~~--~~~~~li~~~l~~dp~~R~s~~e~  219 (429)
                      +.     +.+++..-+.....+. .+..|.+.+  ..+..+++.||..+|.-|.||-.+
T Consensus       438 d~Vp~DPs~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALri  496 (513)
T KOG2052|consen  438 DVVPSDPSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRI  496 (513)
T ss_pred             cCCCCCCCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHH
Confidence            53     2233333333222221 222333322  235678999999999999998554

>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]

Probab=99.89  E-value=1.5e-23  Score=183.12  Aligned_cols=182  Identities=27%  Similarity=0.362  Sum_probs=135.8

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .++++|||+-|+|..-+..   .++.|.....++.|+++||.|||++++||||||.+|||+-..+ .-.+||||||.+..
T Consensus        97 YvF~qE~aP~gdL~snv~~---~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~d-f~rvKlcDFG~t~k  172 (378)
T KOG1345|consen   97 YVFVQEFAPRGDLRSNVEA---AGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDAD-FYRVKLCDFGLTRK  172 (378)
T ss_pred             EEEeeccCccchhhhhcCc---ccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCC-ccEEEeeecccccc
Confidence            3579999999999886633   5789999999999999999999999999999999999998654 45899999999876


Q ss_pred             ccCCCcccccccCCccccccccc----CCC--CCCcchHHHHHHHHHHhhCCCCCCCCChh----HHHHHHHhcCCCCCC
Q 014171          119 IKPGKKFQDIVGSAYYVAPEVLK----RKS--GPESDVWSIGVITYILLCGRRPFWDKTED----GIFKEVLRNKPDFRR  188 (429)
Q Consensus       119 ~~~~~~~~~~~g~~~y~aPE~~~----~~~--~~~~DiwslG~il~~l~~g~~pf~~~~~~----~~~~~i~~~~~~~~~  188 (429)
                      .+..-...  --+..|.+||.+.    +.+  .+.+|+|.||+++|.++||..||......    -.+.+.......-.+
T Consensus       173 ~g~tV~~~--~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~~~P  250 (378)
T KOG1345|consen  173 VGTTVKYL--EYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNPALP  250 (378)
T ss_pred             cCceehhh--hhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCccCc
Confidence            54332222  2245689999763    222  77899999999999999999999643221    112222222222233


Q ss_pred             CCCCCCCHHHHHHHHHhccCCccCc---CCHHHHhCCCccc
Q 014171          189 KPWPSISNSAKDFVKKLLVKDPRAR---LTAAQALSHPWVR  226 (429)
Q Consensus       189 ~~~~~~~~~~~~li~~~l~~dp~~R---~s~~e~l~h~~~~  226 (429)
                      ..+..+++.+..+.++-|..++.+|   .++.......|..
T Consensus       251 ~~F~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E  291 (378)
T KOG1345|consen  251 KKFNPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKE  291 (378)
T ss_pred             hhhcccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHHH
Confidence            3445678999999999999999999   4555555555543

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.88  E-value=9.6e-22  Score=174.74  Aligned_cols=149  Identities=38%  Similarity=0.651  Sum_probs=127.8

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...++|+|++.|++|.+++.... ..++...+..++.+++.+|.+||+.|++|+||+|.||+++.  ..+.++|+|||.+
T Consensus        64 ~~~~~~~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~--~~~~~~l~d~~~~  140 (215)
T cd00180          64 NHLYLVMEYCEGGSLKDLLKENE-GKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDS--DNGKVKLADFGLS  140 (215)
T ss_pred             CeEEEEEecCCCCcHHHHHHhcc-CCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeC--CCCcEEEecCCce
Confidence            35678999999999999885432 46899999999999999999999999999999999999993  1688999999998


Q ss_pred             eeccCCC-cccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          117 DFIKPGK-KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       117 ~~~~~~~-~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      ....... ......+...|++||.+..  ..+.++|+|++|++++++                                 
T Consensus       141 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l---------------------------------  187 (215)
T cd00180         141 KLLTSDKSLLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL---------------------------------  187 (215)
T ss_pred             EEccCCcchhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH---------------------------------
Confidence            7665432 1233457788999999876  557899999999999999                                 


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhCCC
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALSHP  223 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~h~  223 (429)
                        ..+.+++.+|++.+|.+||++.++++++
T Consensus       188 --~~~~~~l~~~l~~~p~~R~~~~~l~~~~  215 (215)
T cd00180         188 --PELKDLIRKMLQKDPEKRPSAKEILEHL  215 (215)
T ss_pred             --HHHHHHHHHHhhCCcccCcCHHHHhhCC
Confidence              6789999999999999999999999874

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.84  E-value=3e-20  Score=167.47  Aligned_cols=142  Identities=36%  Similarity=0.587  Sum_probs=117.1

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCC-CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSR-YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~-l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      ...++|+||+.+++|.+++...  .. +++..+..++.+++.++.+||+++++|+||+|.||+++   ..+.++|+|||.
T Consensus        70 ~~~~~v~e~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~---~~~~~~l~d~g~  144 (225)
T smart00221       70 EPLYLVMEYCEGGDLFDYLRKK--GGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLG---MDGLVKLADFGL  144 (225)
T ss_pred             CceEEEEeccCCCCHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEeeCce
Confidence            4567899999999999998655  33 89999999999999999999999999999999999999   468999999999


Q ss_pred             ceeccCCC--cccccccCCccccccccc--CCCCCCcchHHHHHHHHHHhhCCCCCCC-CCh-hHHHHHHHhcC
Q 014171          116 SDFIKPGK--KFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWD-KTE-DGIFKEVLRNK  183 (429)
Q Consensus       116 a~~~~~~~--~~~~~~g~~~y~aPE~~~--~~~~~~~DiwslG~il~~l~~g~~pf~~-~~~-~~~~~~i~~~~  183 (429)
                      +.......  ......++..|++||.+.  ...+.++|+|++|+++++|++|+.||.. ... ..+...+..+.
T Consensus       145 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~~  218 (225)
T smart00221      145 ARFIHRDLAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSFGV  218 (225)
T ss_pred             eeEecCcccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhcCC
Confidence            88765443  334456788899999873  2346799999999999999999999977 333 35555555554

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]

Probab=99.83  E-value=3.1e-21  Score=184.34  Aligned_cols=142  Identities=29%  Similarity=0.536  Sum_probs=118.1

Q ss_pred             ccccccccccccccCCCCCCcceeeccccceeEeeec-CCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCe
Q 014171           10 RSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLC-EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV   88 (429)
Q Consensus        10 ~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~-~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~   88 (429)
                      .|+|++.++.+++..            ...||+||-. +|-+|++++..+  ..++|.++..|++||+.|+++||+.|||
T Consensus       627 sH~NIlKlLdfFEdd------------d~yyl~te~hg~gIDLFd~IE~k--p~m~E~eAk~IFkQV~agi~hlh~~~iv  692 (772)
T KOG1152|consen  627 SHENILKLLDFFEDD------------DYYYLETEVHGEGIDLFDFIEFK--PRMDEPEAKLIFKQVVAGIKHLHDQGIV  692 (772)
T ss_pred             CccchhhhhheeecC------------CeeEEEecCCCCCcchhhhhhcc--CccchHHHHHHHHHHHhccccccccCce
Confidence            377777777766641            1124566655 356899998544  6899999999999999999999999999


Q ss_pred             ecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccCC-C-CCCcchHHHHHHHHHHhhCCCC
Q 014171           89 HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-S-GPESDVWSIGVITYILLCGRRP  166 (429)
Q Consensus        89 H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~~-~-~~~~DiwslG~il~~l~~g~~p  166 (429)
                      |||||-+|+.++   .+|.+||+|||.|..... +.....+||..|.|||++.+. | +...||||+|++||.++....|
T Consensus       693 hrdikdenvivd---~~g~~klidfgsaa~~ks-gpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenp  768 (772)
T KOG1152|consen  693 HRDIKDENVIVD---SNGFVKLIDFGSAAYTKS-GPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENP  768 (772)
T ss_pred             ecccccccEEEe---cCCeEEEeeccchhhhcC-CCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCC
Confidence            999999999999   489999999999876554 445678999999999999864 3 8899999999999999999999


Q ss_pred             CCC
Q 014171          167 FWD  169 (429)
Q Consensus       167 f~~  169 (429)
                      |+.
T Consensus       769 yyn  771 (772)
T KOG1152|consen  769 YYN  771 (772)
T ss_pred             CcC
Confidence            864

>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]

Probab=99.83  E-value=9.5e-20  Score=146.02  Aligned_cols=140  Identities=27%  Similarity=0.488  Sum_probs=127.1

Q ss_pred             cccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcc
Q 014171          263 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE  342 (429)
Q Consensus       263 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~  342 (429)
                      ..+.+++.++++..|..||.+++|+|+.+||.-++ +++|+.+...++.+++..+|.++.|.|+|++|..++........
T Consensus        25 ~~l~~~q~q~i~e~f~lfd~~~~g~iD~~EL~vAm-ralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~d  103 (172)
T KOG0028|consen   25 SELTEEQKQEIKEAFELFDPDMAGKIDVEELKVAM-RALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGERD  103 (172)
T ss_pred             ccccHHHHhhHHHHHHhhccCCCCcccHHHHHHHH-HHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhccC
Confidence            45577888999999999999999999999999999 67999999999999999999999999999999998876554433


Q ss_pred             cccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       343 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                        +   .+.+..+|+.+|.|++|.|+..+|+.+...+|+      +.+|+.++|.|+||.|+-+||+.+|++
T Consensus       104 --t---~eEi~~afrl~D~D~~Gkis~~~lkrvakeLgenltD~El~eMIeEAd~d~dgevneeEF~~imk~  170 (172)
T KOG0028|consen  104 --T---KEEIKKAFRLFDDDKTGKISQRNLKRVAKELGENLTDEELMEMIEEADRDGDGEVNEEEFIRIMKK  170 (172)
T ss_pred             --c---HHHHHHHHHcccccCCCCcCHHHHHHHHHHhCccccHHHHHHHHHHhcccccccccHHHHHHHHhc
Confidence              2   457899999999999999999999999999985      889999999999999999999999975

>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]

Probab=99.80  E-value=5.1e-19  Score=162.64  Aligned_cols=211  Identities=20%  Similarity=0.310  Sum_probs=145.9

Q ss_pred             cccccccccccccccCCC-CCCcceee--------------ccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHH
Q 014171            9 TRSANCLDMVNLVTPMLP-PTRPMEIV--------------LPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVR   73 (429)
Q Consensus         9 ~~~~n~~~~~~~~~~~~~-~~~~~~~~--------------~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~   73 (429)
                      .+|||++.+...+...-+ .+.-+..|              .+-.-|+||.-+.. +|..++-.+   ..+--..+.++.
T Consensus       273 a~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~---~~s~r~~~~~la  348 (598)
T KOG4158|consen  273 AKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTR---HRSYRTGRVILA  348 (598)
T ss_pred             CCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcC---CCchHHHHHHHH
Confidence            578888887775553221 11111111              11124889999884 899998655   567778888999


Q ss_pred             HHHHHHHHHHHCCCeecCCCCCcEEEeecCC-CCCEEEeecccceeccC-------CCcccccccCCcccccccccCCC-
Q 014171           74 QMLRVAAECHLHGLVHRDMKPENFLFKSAKE-DSSLKATDFGLSDFIKP-------GKKFQDIVGSAYYVAPEVLKRKS-  144 (429)
Q Consensus        74 qil~aL~~lH~~~i~H~dikp~Nil~~~~~~-~~~~kL~Dfg~a~~~~~-------~~~~~~~~g~~~y~aPE~~~~~~-  144 (429)
                      |+++|+.|||++||.|||+|.+|||+.-+++ -..+.++|||.+-.-..       ........|....+|||+.+.-. 
T Consensus       349 QlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~PG  428 (598)
T KOG4158|consen  349 QLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAVPG  428 (598)
T ss_pred             HHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcCCC
Confidence            9999999999999999999999999986432 24568899997643221       12223446777899999986322 


Q ss_pred             ------CCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCH--
Q 014171          145 ------GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA--  216 (429)
Q Consensus       145 ------~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~--  216 (429)
                            -.++|.|++|-+.||++....||++..+...-.+-. ... ..++....+++.+++++..+|+.||++|++.  
T Consensus       429 p~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem~L~~r~Y-qe~-qLPalp~~vpp~~rqlV~~lL~r~pskRvsp~i  506 (598)
T KOG4158|consen  429 PNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEMLLDTRTY-QES-QLPALPSRVPPVARQLVFDLLKRDPSKRVSPNI  506 (598)
T ss_pred             CceeeccchhhhhhhhhhHHHHhccCCcccccchheechhhh-hhh-hCCCCcccCChHHHHHHHHHhcCCccccCCccH
Confidence                  357999999999999999999998844322211111 111 1222335688999999999999999999984  


Q ss_pred             -HHHhCCCcc
Q 014171          217 -AQALSHPWV  225 (429)
Q Consensus       217 -~e~l~h~~~  225 (429)
                       ..+++-..+
T Consensus       507 AANvl~LsLw  516 (598)
T KOG4158|consen  507 AANVLNLSLW  516 (598)
T ss_pred             HHhHHHHHHh
Confidence             456653333

>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]

Probab=99.78  E-value=8.4e-20  Score=177.45  Aligned_cols=180  Identities=27%  Similarity=0.440  Sum_probs=154.3

Q ss_pred             eeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEe
Q 014171           32 EIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT  111 (429)
Q Consensus        32 ~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~  111 (429)
                      ....+...+++++|..||.|...+.+  ...+++...+.+...++-|++++|+.+|+|||+|++||+++   ..|++++.
T Consensus        65 afqt~~kl~l~ld~~rgg~lft~l~~--~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld---~~Ghi~~t  139 (612)
T KOG0603|consen   65 AFQTDGKLYLILDFLRGGDLFTRLSK--EVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLL---LEGHIKLT  139 (612)
T ss_pred             eeccccchhHhhhhcccchhhhcccc--CCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeec---ccCccccC
Confidence            33345667899999999999888844  46789999999999999999999999999999999999999   58999999


Q ss_pred             ecccceeccCCCcccccccCCcccccccccCCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCC
Q 014171          112 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW  191 (429)
Q Consensus       112 Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  191 (429)
                      |||.++..-.....   +||.-|+|||+.+ +....+|.||+|++.++|+||..||.+    ++...|......++.   
T Consensus       140 dfglske~v~~~~~---cgt~eymApEI~~-gh~~a~D~ws~gvl~felltg~~pf~~----~~~~~Il~~~~~~p~---  208 (612)
T KOG0603|consen  140 DFGLSKEAVKEKIA---CGTYEYRAPEIIN-GHLSAADWWSFGVLAFELLTGTLPFGG----DTMKRILKAELEMPR---  208 (612)
T ss_pred             CchhhhHhHhhhhc---ccchhhhhhHhhh-ccCCcccchhhhhhHHHHhhCCCCCch----HHHHHHhhhccCCch---
Confidence            99999866544332   8999999999998 457899999999999999999999977    667777776665554   


Q ss_pred             CCCCHHHHHHHHHhccCCccCcCC-----HHHHhCCCccccC
Q 014171          192 PSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG  228 (429)
Q Consensus       192 ~~~~~~~~~li~~~l~~dp~~R~s-----~~e~l~h~~~~~~  228 (429)
                       .++..+++++..++..+|..|..     +.++++|+||...
T Consensus       209 -~l~~~a~~~~~~l~~r~p~nrLg~~~~~~~eik~h~f~~~i  249 (612)
T KOG0603|consen  209 -ELSAEARSLFRQLFKRNPENRLGAGPDGVDEIKQHEFFQSI  249 (612)
T ss_pred             -hhhHHHHHHHHHHHhhCHHHHhccCcchhHHHhccchheee
Confidence             47889999999999999999974     4789999999864

>PTZ00183 centrin; Provisional

Probab=99.78  E-value=1.5e-18  Score=148.12  Aligned_cols=141  Identities=27%  Similarity=0.485  Sum_probs=121.9

Q ss_pred             hcccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhc
Q 014171          262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE  341 (429)
Q Consensus       262 ~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~  341 (429)
                      ...+++.+.+++..+|..+|.+++|+|+.+||..++.. +|...+...+..++..+|.+++|.|+|+||+.++...... 
T Consensus         8 ~~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~-~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~-   85 (158)
T PTZ00183          8 RPGLTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRS-LGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGE-   85 (158)
T ss_pred             cCCCCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHH-hCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcC-
Confidence            34567888999999999999999999999999999954 7887888899999999999999999999999876543211 


Q ss_pred             ccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC------CHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          342 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       342 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~------~~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                       ...   ...++.+|+.+|++++|+|+.+||+.++...+      ++..++..+|.|++|.|+|+||+++|++
T Consensus        86 -~~~---~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  154 (158)
T PTZ00183         86 -RDP---REEILKAFRLFDDDKTGKISLKNLKRVAKELGETITDEELQEMIDEADRNGDGEISEEEFYRIMKK  154 (158)
T ss_pred             -CCc---HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence             111   24578899999999999999999999987665      3888999999999999999999999976

>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.77  E-value=5.5e-18  Score=161.69  Aligned_cols=182  Identities=19%  Similarity=0.195  Sum_probs=137.4

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecC--CCCCEEEeecccc
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK--EDSSLKATDFGLS  116 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~--~~~~~kL~Dfg~a  116 (429)
                      .|+||+++ |.+|.++......+.++...+..++.|++.+|+++|+.|++||||||+|++++...  +...+.|.|||+|
T Consensus        96 ~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGla  174 (322)
T KOG1164|consen   96 NFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLA  174 (322)
T ss_pred             eEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCC
Confidence            57899998 68999977666568899999999999999999999999999999999999999643  2257999999999


Q ss_pred             e--ecc-CCC-------c-ccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCC
Q 014171          117 D--FIK-PGK-------K-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP  184 (429)
Q Consensus       117 ~--~~~-~~~-------~-~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~  184 (429)
                      +  ... ...       . .....||..|+++.+..+. .+.+.|+||++.++.+++.|..||.+.........+.....
T Consensus       175 r~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~~~~  254 (322)
T KOG1164|consen  175 RRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEKDPR  254 (322)
T ss_pred             ccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHHHhh
Confidence            8  321 110       1 1234599999999998764 48899999999999999999999977664333333332222


Q ss_pred             CCCCC-CCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          185 DFRRK-PWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       185 ~~~~~-~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ..... .....+..+..+...+-..+...+|....+..
T Consensus       255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~  292 (322)
T KOG1164|consen  255 KLLTDRFGDLKPEEFAKILEYIDSLDYEDKPDYEKLAE  292 (322)
T ss_pred             hhccccccCCChHHHHHHHHHhhccCCcCCCCHHHHHH
Confidence            21111 12234567888888777788899998876543

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.77  E-value=1.2e-17  Score=158.76  Aligned_cols=187  Identities=33%  Similarity=0.518  Sum_probs=146.5

Q ss_pred             ceeEeeecCCCChHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCC-CEEEeecccc
Q 014171           39 KLRRIRLCEGGELLDRILAKKD-SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS-SLKATDFGLS  116 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~-~~kL~Dfg~a  116 (429)
                      .+++++|+.++++.+.+..... ..+++..+..++.|++.++.|+|+.|++|||+||+||+++.   .+ .++++|||.+
T Consensus        73 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~---~~~~~~l~dfg~~  149 (384)
T COG0515          73 LYLVMEYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDR---DGRVVKLIDFGLA  149 (384)
T ss_pred             EEEEEecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecC---CCCeEEEeccCcc
Confidence            4789999999999966643311 27999999999999999999999999999999999999994   44 6999999998


Q ss_pred             eeccCCC-------cccccccCCcccccccccC----CCCCCcchHHHHHHHHHHhhCCCCCCCCCh----hHHHHHHHh
Q 014171          117 DFIKPGK-------KFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFKEVLR  181 (429)
Q Consensus       117 ~~~~~~~-------~~~~~~g~~~y~aPE~~~~----~~~~~~DiwslG~il~~l~~g~~pf~~~~~----~~~~~~i~~  181 (429)
                      .......       ......|+..|+|||.+.+    ..+...|+||+|++++++++|..||.....    ......+..
T Consensus       150 ~~~~~~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~  229 (384)
T COG0515         150 KLLPDPGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILE  229 (384)
T ss_pred             eecCCCCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHh
Confidence            7554332       2356789999999999875    458899999999999999999999876653    344444444


Q ss_pred             cCCC-CCCCCCCCC----CHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          182 NKPD-FRRKPWPSI----SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       182 ~~~~-~~~~~~~~~----~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      .... .........    ...+.+++.+++..+|..|.+..+...++|....
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~  281 (384)
T COG0515         230 LPTPSLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSHDLLAHL  281 (384)
T ss_pred             cCCcccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhchHhhCc
Confidence            4332 222221121    2578999999999999999999998888766554

>PTZ00184 calmodulin; Provisional

Probab=99.77  E-value=3e-18  Score=144.63  Aligned_cols=140  Identities=28%  Similarity=0.547  Sum_probs=119.7

Q ss_pred             cccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcc
Q 014171          263 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE  342 (429)
Q Consensus       263 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~  342 (429)
                      ..+++++.++++..|..+|.+++|.|+.+||..++.. ++..++.+++..++..+|.+++|.|+|++|+.++........
T Consensus         3 ~~~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~   81 (149)
T PTZ00184          3 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS-LGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDTD   81 (149)
T ss_pred             CccCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHH-hCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCc
Confidence            4467888899999999999999999999999999955 788888889999999999999999999999987654322111


Q ss_pred             cccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC------CHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       343 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~------~~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                           ....+..+|+.+|.+++|+|+.+||..++...+      ++..++..+|.+++|.|+|+||+.++..
T Consensus        82 -----~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~  148 (149)
T PTZ00184         82 -----SEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMMS  148 (149)
T ss_pred             -----HHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCCCCCHHHHHHHHHhcCCCCCCcCcHHHHHHHHhc
Confidence                 124578899999999999999999999886654      3788999999999999999999998863

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.77  E-value=7.6e-19  Score=179.00  Aligned_cols=151  Identities=30%  Similarity=0.527  Sum_probs=130.5

Q ss_pred             HHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccceeccC----------------CCcccccccCCccccccc
Q 014171           76 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP----------------GKKFQDIVGSAYYVAPEV  139 (429)
Q Consensus        76 l~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~----------------~~~~~~~~g~~~y~aPE~  139 (429)
                      +.+++|||+.||+|||+||+|.+++   .-+++|+.|||+++..-.                .......+|||.|+|||+
T Consensus       153 vla~Eylh~ygivhrdlkpdnllIT---~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeV  229 (1205)
T KOG0606|consen  153 VLAVEYLHSYGIVHRDLKPDNLLIT---SMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEV  229 (1205)
T ss_pred             hHHhHhhccCCeecCCCCCCcceee---ecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccccChhh
Confidence            7799999999999999999999999   489999999999764310                001134589999999998


Q ss_pred             cc-CCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcC---C
Q 014171          140 LK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL---T  215 (429)
Q Consensus       140 ~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~---s  215 (429)
                      +. .+|+..+|+|++|+++|+.+.|..||.+.+.++++..++.....++... ..++++++++|.++|+.+|..|.   .
T Consensus       230 ilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~d-ea~p~Ea~dli~~LL~qnp~~Rlgt~g  308 (1205)
T KOG0606|consen  230 ILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEED-EALPPEAQDLIEQLLRQNPLCRLGTGG  308 (1205)
T ss_pred             hhhhccCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccC-cCCCHHHHHHHHHHHHhChHhhcccch
Confidence            75 5689999999999999999999999999999999999999888888774 46889999999999999999995   4


Q ss_pred             HHHHhCCCccccCCC
Q 014171          216 AAQALSHPWVREGGD  230 (429)
Q Consensus       216 ~~e~l~h~~~~~~~~  230 (429)
                      +-++.+|+||+....
T Consensus       309 a~evk~h~ff~~LDw  323 (1205)
T KOG0606|consen  309 ALEVKQHGFFQLLDW  323 (1205)
T ss_pred             hhhhhhccceeeccc
Confidence            668999999997543

>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]

Probab=99.73  E-value=2.4e-18  Score=164.36  Aligned_cols=175  Identities=22%  Similarity=0.382  Sum_probs=134.2

Q ss_pred             ceeEeeecCCCChHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           39 KLRRIRLCEGGELLDRILAK-KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      .|+.|++|.-++|.+.+.++ .....+......++.|+..|++|   +|.+|+|+||.||++.   .+..+||+|||+..
T Consensus       331 lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~---~d~q~kIgDFgl~t  404 (516)
T KOG1033|consen  331 LYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFS---DDDQLKIGDFGLVT  404 (516)
T ss_pred             hhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccc---cchhhhhhhhhhee
Confidence            37899999999999999744 33457788899999999999999   9999999999999998   46789999999987


Q ss_pred             eccCCC-------cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCC
Q 014171          118 FIKPGK-------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRR  188 (429)
Q Consensus       118 ~~~~~~-------~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~  188 (429)
                      ......       .....+||..|++||.+.+ .|+.++||||||++|+|++. -..++   ........+..+.  +++
T Consensus       405 s~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~---er~~t~~d~r~g~--ip~  479 (516)
T KOG1033|consen  405 SQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQF---ERIATLTDIRDGI--IPP  479 (516)
T ss_pred             ecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHH---HHHHhhhhhhcCC--CCh
Confidence            765544       4456689999999999985 57999999999999999998 33332   1111222222222  222


Q ss_pred             CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          189 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       189 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                      ..+.+ .+.-..|+..|+.+.|.+||++.+.--|+|.
T Consensus       480 ~~~~d-~p~e~~ll~~lls~~p~~RP~~~~~~~~~~~  515 (516)
T KOG1033|consen  480 EFLQD-YPEEYTLLQQLLSPSPEERPSAIEVALHEFL  515 (516)
T ss_pred             HHhhc-CcHHHHHHHHhcCCCcccCchHHHHhhhhhc
Confidence            22222 2345689999999999999988777777764

>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]

Probab=99.73  E-value=3.5e-17  Score=159.17  Aligned_cols=199  Identities=22%  Similarity=0.271  Sum_probs=149.3

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG   86 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~   86 (429)
                      +.+.|.|...+.+.+...            ...+.|.+||.-|+|.+.+.. ....++......++++|+.||.|+|..-
T Consensus         2 ~~l~h~n~~~f~g~~~~~------------~~~~~i~~~c~rGsl~D~i~~-~~~~~d~~F~~s~~rdi~~Gl~ylh~s~   68 (484)
T KOG1023|consen    2 RQLDHDNLNKFIGASVDG------------PEMIVIWEYCSRGSLLDILSN-EDIKLDYFFILSFIRDISKGLAYLHNSP   68 (484)
T ss_pred             cccchhhhhhheeeEecC------------CceEEEEeeecCccHHhHHhc-cccCccHHHHHHHHHHHHHHHHHHhcCc
Confidence            467788887777755541            233458899999999998865 3467899999999999999999999876


Q ss_pred             C-eecCCCCCcEEEeecCCCCCEEEeecccceeccC---CCcccccccCCcccccccccCC--------CCCCcchHHHH
Q 014171           87 L-VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP---GKKFQDIVGSAYYVAPEVLKRK--------SGPESDVWSIG  154 (429)
Q Consensus        87 i-~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~---~~~~~~~~g~~~y~aPE~~~~~--------~~~~~DiwslG  154 (429)
                      | +|+.+++.|++++   ....+||+|||+......   ............|.|||.+...        .+++.|+||+|
T Consensus        69 i~~hg~l~s~nClvd---~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~  145 (484)
T KOG1023|consen   69 IGYHGALKSSNCLVD---SRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFG  145 (484)
T ss_pred             ceeeeeeccccceee---eeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHH
Confidence            5 9999999999999   588999999998765532   1111222234579999998652        36779999999


Q ss_pred             HHHHHHhhCCCCCCCC----ChhHHHHHHHh-cCCCCCCCCCC--CCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          155 VITYILLCGRRPFWDK----TEDGIFKEVLR-NKPDFRRKPWP--SISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       155 ~il~~l~~g~~pf~~~----~~~~~~~~i~~-~~~~~~~~~~~--~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ++++++++.+.||...    ...++...+.. +...+.+..+.  ...+++..++..||..+|.+||+++++-.
T Consensus       146 ii~~ei~~r~~~~~~~~~~~~~~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~  219 (484)
T KOG1023|consen  146 IIMYEILFRSGPFDLRNLVEDPDEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEIPEKRPSIEQIRS  219 (484)
T ss_pred             HHHHHHHhccCccccccccCChHHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccChhhCccHHHHHh
Confidence            9999999999999653    22345555555 33223332221  34567899999999999999999988643

>KOG0030 consensus Myosin essential light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=99.72  E-value=1.7e-17  Score=129.79  Aligned_cols=138  Identities=21%  Similarity=0.339  Sum_probs=118.8

Q ss_pred             cchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCC--CCCcccHHHHHHHHhhhhhhcc
Q 014171          265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN--TDGLVDFSEFVAATLHVHQLEE  342 (429)
Q Consensus       265 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~--~~g~I~~~eF~~~~~~~~~~~~  342 (429)
                      +++++..+++++|..||..+||+|+..+...+| +++|.+|++.++.+....++.+  +-.+|+|++|+.++..+.+.+.
T Consensus         5 ~~~d~~~e~ke~F~lfD~~gD~ki~~~q~gdvl-RalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk~   83 (152)
T KOG0030|consen    5 FTPDQMEEFKEAFLLFDRTGDGKISGSQVGDVL-RALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNKD   83 (152)
T ss_pred             cCcchHHHHHHHHHHHhccCcccccHHHHHHHH-HHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhccc
Confidence            467778999999999999999999999999999 7899999999999999998876  4568999999998877766543


Q ss_pred             cccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHH
Q 014171          343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLR  407 (429)
Q Consensus       343 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~  407 (429)
                      ...   .+...+.++.||++++|.|...||+++|..+|+      ++.++.... |.+|.|+|++|++.+.
T Consensus        84 q~t---~edfvegLrvFDkeg~G~i~~aeLRhvLttlGekl~eeEVe~Llag~e-D~nG~i~YE~fVk~i~  150 (152)
T KOG0030|consen   84 QGT---YEDFVEGLRVFDKEGNGTIMGAELRHVLTTLGEKLTEEEVEELLAGQE-DSNGCINYEAFVKHIM  150 (152)
T ss_pred             cCc---HHHHHHHHHhhcccCCcceeHHHHHHHHHHHHhhccHHHHHHHHcccc-ccCCcCcHHHHHHHHh
Confidence            322   356778999999999999999999999999995      777777654 7899999999998764

>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.72  E-value=2.3e-17  Score=142.37  Aligned_cols=214  Identities=17%  Similarity=0.184  Sum_probs=155.0

Q ss_pred             ceeeecccccccc---cccccccccCCCCCCcceeec-cccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHH
Q 014171            2 IKILIGDTRSANC---LDMVNLVTPMLPPTRPMEIVL-PLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR   77 (429)
Q Consensus         2 ik~~~~~~~~~n~---~~~~~~~~~~~~~~~~~~~~~-~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~   77 (429)
                      ||..-+.++||+.   ..++++++.--..++...... ..-..+||++. |-+|.+++ +-.+..++..++..++-|++.
T Consensus        45 iK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL-GPsLEdLf-nfC~R~ftmkTvLMLaDQml~  122 (341)
T KOG1163|consen   45 IKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL-GPSLEDLF-NFCSRRFTMKTVLMLADQMLS  122 (341)
T ss_pred             EEeecccCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc-CccHHHHH-HHHhhhhhHHhHHHHHHHHHH
Confidence            6777778888874   445555554222222111111 12246899998 45666654 445678999999999999999


Q ss_pred             HHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc--------ccccccCCcccccccccCC-CCCCc
Q 014171           78 VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK--------FQDIVGSAYYVAPEVLKRK-SGPES  148 (429)
Q Consensus        78 aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~--------~~~~~g~~~y~aPE~~~~~-~~~~~  148 (429)
                      -++|+|.++++||||||+|+|.+.......+.|+|||+|+.......        .....||.+|.+-....+. .+.+-
T Consensus       123 RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRD  202 (341)
T KOG1163|consen  123 RIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRD  202 (341)
T ss_pred             HHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhh
Confidence            99999999999999999999999765667899999999987643222        2345789999998877653 47889


Q ss_pred             chHHHHHHHHHHhhCCCCCCCCChh---HHHHHHHhcCCCCCC-CCCCCCCHHHHHHHHHhccCCccCcCCHH
Q 014171          149 DVWSIGVITYILLCGRRPFWDKTED---GIFKEVLRNKPDFRR-KPWPSISNSAKDFVKKLLVKDPRARLTAA  217 (429)
Q Consensus       149 DiwslG~il~~l~~g~~pf~~~~~~---~~~~~i~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~R~s~~  217 (429)
                      |+=|+|.++.+...|..||.+....   ..+++|.......+. ......|.++.-.+..|-..--.+-|...
T Consensus       203 DmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~  275 (341)
T KOG1163|consen  203 DMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYM  275 (341)
T ss_pred             hhhhhcceeeeeecCCCcccccchhhHHHHHHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHH
Confidence            9999999999999999999886543   345555554443332 22356788898899888888777777753

>KOG0031 consensus Myosin regulatory light chain, EF-Hand protein superfamily [Cytoskeleton]

Probab=99.72  E-value=6.1e-17  Score=128.92  Aligned_cols=141  Identities=22%  Similarity=0.379  Sum_probs=123.3

Q ss_pred             HHhhhcccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhh
Q 014171          258 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV  337 (429)
Q Consensus       258 l~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~  337 (429)
                      ...+...+.+.|+++++++|..+|.|+||.|++++|...|.. +|..+++++++.|+++    ..|.|+|.-|+.++-..
T Consensus        19 sSnvFamf~q~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aS-lGk~~~d~elDaM~~E----a~gPINft~FLTmfGek   93 (171)
T KOG0031|consen   19 SSNVFAMFDQSQIQEFKEAFNLMDQNRDGFIDKEDLRDMLAS-LGKIASDEELDAMMKE----APGPINFTVFLTMFGEK   93 (171)
T ss_pred             cchHHHHhhHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHH-cCCCCCHHHHHHHHHh----CCCCeeHHHHHHHHHHH
Confidence            344555678999999999999999999999999999999955 9999999999999987    47899999999876544


Q ss_pred             hhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          338 HQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       338 ~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                      ...  .++   ++.+..||+.||.+++|.|..+.|+++|...|+      ++.+++.+-.|..|.++|.+|+.++..
T Consensus        94 L~g--tdp---e~~I~~AF~~FD~~~~G~I~~d~lre~Ltt~gDr~~~eEV~~m~r~~p~d~~G~~dy~~~~~~ith  165 (171)
T KOG0031|consen   94 LNG--TDP---EEVILNAFKTFDDEGSGKIDEDYLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFDYKAFTYIITH  165 (171)
T ss_pred             hcC--CCH---HHHHHHHHHhcCccCCCccCHHHHHHHHHHhcccCCHHHHHHHHHhCCcccCCceeHHHHHHHHHc
Confidence            333  233   356889999999999999999999999999985      899999999999999999999999984

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=99.71  E-value=8.9e-18  Score=153.72  Aligned_cols=162  Identities=24%  Similarity=0.369  Sum_probs=104.9

Q ss_pred             cceeEeeecCCCChHHHHHh---hcCC--CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEee
Q 014171           38 RKLRRIRLCEGGELLDRILA---KKDS--RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD  112 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~---~~~~--~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~D  112 (429)
                      ..+++|+-+. ++|.+.+.-   ....  .+.......+..|++..+++||..|++|+||+|+|++++   .+|.+.|+|
T Consensus       113 n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHgdi~~~nfll~---~~G~v~Lg~  188 (288)
T PF14531_consen  113 NRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHGDIKPENFLLD---QDGGVFLGD  188 (288)
T ss_dssp             SEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEE----TTS-EEE--
T ss_pred             hhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEecccceeeEEEc---CCCCEEEcC
Confidence            3466788775 788777532   2212  122333345668999999999999999999999999999   589999999


Q ss_pred             cccceeccCCCcccccccCCcccccccccC---------CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcC
Q 014171          113 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKR---------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK  183 (429)
Q Consensus       113 fg~a~~~~~~~~~~~~~g~~~y~aPE~~~~---------~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~  183 (429)
                      |+...........  ...+..|.+||....         .++.+.|.|++|+++|.+++|..||...........     
T Consensus       189 F~~~~r~g~~~~~--~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf~~~~~~~~~~~-----  261 (288)
T PF14531_consen  189 FSSLVRAGTRYRC--SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPFGLSSPEADPEW-----  261 (288)
T ss_dssp             GGGEEETTEEEEG--GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-STCCCGGGSTSGG-----
T ss_pred             hHHHeecCceeec--cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCCCCCCccccccc-----
Confidence            9877655432221  334577999997642         247788999999999999999999965543322211     


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHhccCCccCc
Q 014171          184 PDFRRKPWPSISNSAKDFVKKLLVKDPRAR  213 (429)
Q Consensus       184 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~R  213 (429)
                         ......++++.++.||.++|+.||.+|
T Consensus       262 ---~f~~C~~~Pe~v~~LI~~lL~~~~~~R  288 (288)
T PF14531_consen  262 ---DFSRCRDMPEPVQFLIRGLLQRNPEDR  288 (288)
T ss_dssp             ---GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred             ---cchhcCCcCHHHHHHHHHHccCCcccC
Confidence               111223689999999999999999988

>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]

Probab=99.71  E-value=3.9e-17  Score=139.70  Aligned_cols=137  Identities=29%  Similarity=0.473  Sum_probs=115.3

Q ss_pred             cccchHHHhhhhccccccCCC-CCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCc-ccHHHHHHHHhhhhhh
Q 014171          263 STLDDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL-VDFSEFVAATLHVHQL  340 (429)
Q Consensus       263 ~~~~~~~~~~l~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~-I~~~eF~~~~~~~~~~  340 (429)
                      ..++..|+..|+..|.++|.+ ++|+++.+||..+..  +..+   .-.++++..++.+++|. |+|++|+..+......
T Consensus        25 ~~fs~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~~--~~~N---p~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~   99 (187)
T KOG0034|consen   25 TQFSANEIERLYERFKKLDRNNGDGYLTKEEFLSIPE--LALN---PLADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPK   99 (187)
T ss_pred             cccCHHHHHHHHHHHHHhccccccCccCHHHHHHHHH--HhcC---cHHHHHHHHHhccCCCCccCHHHHHHHHhhhcCC
Confidence            457889999999999999999 999999999999983  3333   35578899999988888 9999999988766443


Q ss_pred             cccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC-------------CHHHHHHHhCCCCCCcccHHHHHHHHH
Q 014171          341 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-------------SIDPLLEEADIDKDGRISLSEFRRLLR  407 (429)
Q Consensus       341 ~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~-------------~~~~~~~~~d~~~dg~i~~~ef~~~~~  407 (429)
                      ..   .  .++++-||+.||.+++|+|+++|+.+++..+-             .++.+|.++|.|+||.|+|+||++++.
T Consensus       100 ~~---~--~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~  174 (187)
T KOG0034|consen  100 AS---K--REKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVE  174 (187)
T ss_pred             cc---H--HHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            33   2  25788999999999999999999998775442             178899999999999999999999998


Q ss_pred             hc
Q 014171          408 TA  409 (429)
Q Consensus       408 ~~  409 (429)
                      +.
T Consensus       175 ~~  176 (187)
T KOG0034|consen  175 KQ  176 (187)
T ss_pred             cC
Confidence            76

>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=99.70  E-value=8e-17  Score=137.73  Aligned_cols=139  Identities=27%  Similarity=0.420  Sum_probs=115.2

Q ss_pred             cccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcc
Q 014171          263 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE  342 (429)
Q Consensus       263 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~  342 (429)
                      ..++..+++.++.-|..-  ..+|.++.++|+.++...++..-+..-.+.+|+.+|.|++|.|+|.||+.+++.......
T Consensus        21 t~f~~~ei~~~Yr~Fk~~--cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt~   98 (193)
T KOG0044|consen   21 TKFSKKEIQQWYRGFKNE--CPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSRGTL   98 (193)
T ss_pred             cCCCHHHHHHHHHHhccc--CCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCCcH
Confidence            456778888887777763  347999999999999887776666777899999999999999999999999888777665


Q ss_pred             cccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCC----C-------------CHHHHHHHhCCCCCCcccHHHHHHH
Q 014171          343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----G-------------SIDPLLEEADIDKDGRISLSEFRRL  405 (429)
Q Consensus       343 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~----~-------------~~~~~~~~~d~~~dg~i~~~ef~~~  405 (429)
                      .+      ++.=+|+.||.|++|+|+++|+..+++..    +             .++.+|+.+|.|+||.||++||+..
T Consensus        99 ee------kl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~  172 (193)
T KOG0044|consen   99 EE------KLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEG  172 (193)
T ss_pred             HH------HhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHH
Confidence            44      44458999999999999999998765422    1             1788999999999999999999988


Q ss_pred             HHhc
Q 014171          406 LRTA  409 (429)
Q Consensus       406 ~~~~  409 (429)
                      .+.-
T Consensus       173 ~~~d  176 (193)
T KOG0044|consen  173 CKAD  176 (193)
T ss_pred             hhhC
Confidence            7654

>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]

Probab=99.70  E-value=8.2e-17  Score=141.27  Aligned_cols=173  Identities=17%  Similarity=0.157  Sum_probs=134.6

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCcEEEeecCCCCCEEE--ee
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKA--TD  112 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~--i~H~dikp~Nil~~~~~~~~~~kL--~D  112 (429)
                      +...++..|++-|+|+..++...+-..+..++.+++.++++|+.|||+..  |.---|....++++   ++.+.+|  +|
T Consensus       260 pnlv~isq~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmid---edltarismad  336 (448)
T KOG0195|consen  260 PNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMID---EDLTARISMAD  336 (448)
T ss_pred             CCceEeeeeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEec---chhhhheeccc
Confidence            33446788999999999998887667889999999999999999999975  44556788888988   3444443  34


Q ss_pred             cccceeccCCCcccccccCCcccccccccCCC----CCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCC
Q 014171          113 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS----GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR  188 (429)
Q Consensus       113 fg~a~~~~~~~~~~~~~g~~~y~aPE~~~~~~----~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~  188 (429)
                      -.++-+      .....-+|.|++||.+....    -.++|+|||++++||+.|...||...++-+.-.++.....  ..
T Consensus       337 ~kfsfq------e~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgmkialegl--rv  408 (448)
T KOG0195|consen  337 TKFSFQ------EVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGMKIALEGL--RV  408 (448)
T ss_pred             ceeeee------ccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhhhhhhccc--cc
Confidence            222211      12234578999999997543    3578999999999999999999999888888777765443  33


Q ss_pred             CCCCCCCHHHHHHHHHhccCCccCcCCHHHHh
Q 014171          189 KPWPSISNSAKDFVKKLLVKDPRARLTAAQAL  220 (429)
Q Consensus       189 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l  220 (429)
                      ..+|.++.-+..|+.-|++.||.+||.++.++
T Consensus       409 ~ippgis~hm~klm~icmnedpgkrpkfdmiv  440 (448)
T KOG0195|consen  409 HIPPGISRHMNKLMNICMNEDPGKRPKFDMIV  440 (448)
T ss_pred             cCCCCccHHHHHHHHHHhcCCCCcCCCcceeh
Confidence            44568999999999999999999999987654

>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]

Probab=99.69  E-value=2.1e-17  Score=168.84  Aligned_cols=174  Identities=23%  Similarity=0.315  Sum_probs=123.5

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|||-+|... +|++++..+  ..+...+.+-|+-|++.||..||..||+|||||.+|||+++   -+=+.|+||..-+.
T Consensus        96 AylvRqyvkh-nLyDRlSTR--PFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTS---WNW~~LtDFAsFKP  169 (1431)
T KOG1240|consen   96 AYLVRQYVKH-NLYDRLSTR--PFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITS---WNWLYLTDFASFKP  169 (1431)
T ss_pred             HHHHHHHHhh-hhhhhhccc--hHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEee---echhhhhcccccCC
Confidence            5788899984 999999665  46788888999999999999999999999999999999994   34478999976543


Q ss_pred             ccCCC----c----ccccccCCcccccccccC-----------C-CCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHH
Q 014171          119 IKPGK----K----FQDIVGSAYYVAPEVLKR-----------K-SGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFK  177 (429)
Q Consensus       119 ~~~~~----~----~~~~~g~~~y~aPE~~~~-----------~-~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~  177 (429)
                      .--+.    .    ..+......|.|||.+..           . .+++.||||+||+++|+++ |++||.   -.... 
T Consensus       170 tYLPeDNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~---LSQL~-  245 (1431)
T KOG1240|consen  170 TYLPEDNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFT---LSQLL-  245 (1431)
T ss_pred             ccCCCCCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCccc---HHHHH-
Confidence            21111    1    112233457999998742           1 2567899999999999998 688872   11111 


Q ss_pred             HHHhcCCCCCCCCCCC-CCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          178 EVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       178 ~i~~~~~~~~~~~~~~-~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      +...+....+...... -+..++.+|..|++.||++|.+|++.|+.
T Consensus       246 aYr~~~~~~~e~~Le~Ied~~~Rnlil~Mi~rdPs~RlSAedyL~~  291 (1431)
T KOG1240|consen  246 AYRSGNADDPEQLLEKIEDVSLRNLILSMIQRDPSKRLSAEDYLQK  291 (1431)
T ss_pred             hHhccCccCHHHHHHhCcCccHHHHHHHHHccCchhccCHHHHHHh
Confidence            1111111000000000 14468999999999999999999999875

>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.64  E-value=1.6e-15  Score=128.90  Aligned_cols=128  Identities=26%  Similarity=0.365  Sum_probs=113.2

Q ss_pred             HhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHH
Q 014171          270 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWH  349 (429)
Q Consensus       270 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~  349 (429)
                      ...+...|...|.|+.|.|+.+|++.+|...-...++.+.|+.|+..+|.+.+|+|+|+||...+..+..++        
T Consensus        56 ~~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i~~Wr--------  127 (221)
T KOG0037|consen   56 FPQLAGWFQSVDRDRSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKYINQWR--------  127 (221)
T ss_pred             cHHHHHHHHhhCccccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHH--------
Confidence            356788899999999999999999999965455678899999999999999999999999998886665443        


Q ss_pred             HHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          350 LRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       350 ~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                          .+|+.||+|++|.|+..||+.++..+|.      .+.+++.+|.-++|.|.|++|++..-..
T Consensus       128 ----~vF~~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~L  189 (221)
T KOG0037|consen  128 ----NVFRTYDRDRSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVVL  189 (221)
T ss_pred             ----HHHHhcccCCCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhccccCCceeHHHHHHHHHHH
Confidence                4899999999999999999999999994      7889999998889999999999876543

>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]

Probab=99.63  E-value=1.7e-15  Score=136.67  Aligned_cols=175  Identities=19%  Similarity=0.290  Sum_probs=130.3

Q ss_pred             eeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecC--CCCCEEEeecccce
Q 014171           40 LRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK--EDSSLKATDFGLSD  117 (429)
Q Consensus        40 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~--~~~~~kL~Dfg~a~  117 (429)
                      .||+|+. |-||.+ |..-.+.+++...+..++.|++.-++|+|++.+|+|||||+|+||+..+  +.+.|.++|||+|+
T Consensus       100 iLVidLL-GPSLED-LFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK  177 (449)
T KOG1165|consen  100 ILVIDLL-GPSLED-LFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAK  177 (449)
T ss_pred             hhhhhhh-CcCHHH-HHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchh
Confidence            5788888 456666 4455678999999999999999999999999999999999999999643  34678999999998


Q ss_pred             eccCCCcc--------cccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCCCCCCCC---hhHHHHHHHhcCCC
Q 014171          118 FIKPGKKF--------QDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKT---EDGIFKEVLRNKPD  185 (429)
Q Consensus       118 ~~~~~~~~--------~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~---~~~~~~~i~~~~~~  185 (429)
                      ........        ....||.+||+-....+. .+.+-|+=|+|-++.+.+.|..||.|..   ..+.+++|-.....
T Consensus       178 ~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~Kr~  257 (449)
T KOG1165|consen  178 EYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGETKRS  257 (449)
T ss_pred             hhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhcccccc
Confidence            77544332        456799999998877664 4888999999999999999999998753   33445554433322


Q ss_pred             CCC-CCCCCCCHHHHHHHHHhccCCccCcCCH
Q 014171          186 FRR-KPWPSISNSAKDFVKKLLVKDPRARLTA  216 (429)
Q Consensus       186 ~~~-~~~~~~~~~~~~li~~~l~~dp~~R~s~  216 (429)
                      .+. .....++.++...+...-..+-.+-|..
T Consensus       258 T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDY  289 (449)
T KOG1165|consen  258 TPIEVLCEGFPEEFATYLRYVRRLDFFETPDY  289 (449)
T ss_pred             CCHHHHHhcCHHHHHHHHHHHHhcCcccCCCH
Confidence            211 1123456666666665555566666654

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.60  E-value=2.8e-15  Score=130.55  Aligned_cols=124  Identities=19%  Similarity=0.284  Sum_probs=92.3

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCC-CCCcEEEeecCCCCCEEEeeccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM-KPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~di-kp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      ...|+||||+.|++|...+.        .. ...++.|++.+|.++|++||+|||| ||+||+++   .++.++|+|||+
T Consensus        71 ~~~~lvmeyI~G~~L~~~~~--------~~-~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~---~~g~i~LIDFG~  138 (218)
T PRK12274         71 DGRHLDRSYLAGAAMYQRPP--------RG-DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQ---EDGSPAVIDFQL  138 (218)
T ss_pred             cCEEEEEeeecCccHHhhhh--------hh-hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEc---CCCCEEEEECCC
Confidence            44689999999998865331        11 1357889999999999999999999 79999998   467899999999


Q ss_pred             ceeccCCCcc------c--------ccccCCccccccccc--CCCC-CCcchHHHHHHHHHHhhCCCCCCCCCh
Q 014171          116 SDFIKPGKKF------Q--------DIVGSAYYVAPEVLK--RKSG-PESDVWSIGVITYILLCGRRPFWDKTE  172 (429)
Q Consensus       116 a~~~~~~~~~------~--------~~~g~~~y~aPE~~~--~~~~-~~~DiwslG~il~~l~~g~~pf~~~~~  172 (429)
                      |.........      .        -...++.|++|+.-.  ...+ ...+.++.|.-+|.++|+..|.++..+
T Consensus       139 A~~~~~~~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~~  212 (218)
T PRK12274        139 AVRGNPRARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDNE  212 (218)
T ss_pred             ceecCCcchHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccCC
Confidence            9865543321      0        012466677776432  2223 567888999999999999999877654

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.58  E-value=2.1e-15  Score=144.06  Aligned_cols=103  Identities=21%  Similarity=0.324  Sum_probs=78.2

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCC-CCCcEEEeecCCCCCEEEeeccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM-KPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~di-kp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      ...|+|||||.|++|.. +  ..   ..   ...++.|++.||.|||++||+|||| ||+||+++   .++.++|+|||+
T Consensus        91 ~~~~LVmE~~~G~~L~~-~--~~---~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~---~~~~ikLiDFGl  158 (365)
T PRK09188         91 GKDGLVRGWTEGVPLHL-A--RP---HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMG---PDGEAAVIDFQL  158 (365)
T ss_pred             CCcEEEEEccCCCCHHH-h--Cc---cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEc---CCCCEEEEECcc
Confidence            45689999999999962 2  11   11   1467899999999999999999999 99999997   467899999999


Q ss_pred             ceeccCCCc---------ccccccCCcccccccccCC-------CCCCcchH
Q 014171          116 SDFIKPGKK---------FQDIVGSAYYVAPEVLKRK-------SGPESDVW  151 (429)
Q Consensus       116 a~~~~~~~~---------~~~~~g~~~y~aPE~~~~~-------~~~~~Diw  151 (429)
                      |+.......         ..+..+++.|.|||.+...       .+..+|-|
T Consensus       159 A~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~~~~~~~~~~~~~dgW  210 (365)
T PRK09188        159 ASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPRERKILARKSLPSRIW  210 (365)
T ss_pred             ceecccCcchhhhhhhhhhhhhhccCccCCcccCChhhhccccccccccCcE
Confidence            986654321         1345678889999998532       13446766

>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]

Probab=99.57  E-value=5.9e-16  Score=157.41  Aligned_cols=186  Identities=30%  Similarity=0.505  Sum_probs=151.0

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCCeecCCCCCcEEEeecCCCC-CEEEeecccc
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH-LHGLVHRDMKPENFLFKSAKEDS-SLKATDFGLS  116 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH-~~~i~H~dikp~Nil~~~~~~~~-~~kL~Dfg~a  116 (429)
                      .+++++|..||++.+.+........+...+..++.|+..++.|+| ..++.|+||||+|.+++.   ++ .+++.|||+|
T Consensus        96 ~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~---s~~~l~~~df~~A  172 (601)
T KOG0590|consen   96 YLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDE---SGSALKIADFGLA  172 (601)
T ss_pred             cccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhcc---CCCcccCCCchhh
Confidence            456899999999998773221126788889999999999999999 999999999999999994   55 8999999999


Q ss_pred             eeccC-CC---ccccccc-CCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHH-HHHHhcCCCCCC
Q 014171          117 DFIKP-GK---KFQDIVG-SAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF-KEVLRNKPDFRR  188 (429)
Q Consensus       117 ~~~~~-~~---~~~~~~g-~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~-~~i~~~~~~~~~  188 (429)
                      ..... .+   .....+| ++.|.|||...+  ...+..|+||+|+++..+++|..|+......... .........+..
T Consensus       173 t~~~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  252 (601)
T KOG0590|consen  173 TAYRNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFTQ  252 (601)
T ss_pred             ccccccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeeccccccccc
Confidence            87654 22   2344577 999999999977  3478899999999999999999998665444322 222333333455


Q ss_pred             CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcccc
Q 014171          189 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE  227 (429)
Q Consensus       189 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~  227 (429)
                      ..|..++....+++.+++..+|..|.+.+++-.++|+..
T Consensus       253 ~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~d~~~~~  291 (601)
T KOG0590|consen  253 LPWNSISDQAHDLLHKILKENPSNRLSIEELKLDNWLSS  291 (601)
T ss_pred             CccccCChhhhhcccccccCCchhccccccccccccccc
Confidence            678889999999999999999999999999999999988

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=99.53  E-value=1.9e-14  Score=126.18  Aligned_cols=77  Identities=19%  Similarity=0.182  Sum_probs=66.3

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHH-HHCCCeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC-HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~l-H~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      ...++|||||.|+++......  .+.+++..+..++.|++.+|.|+ |+.||+||||||+||+++    ++.++|+|||+
T Consensus        90 ~~~~iVmE~i~g~~l~~~~~~--~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~----~~~v~LiDFG~  163 (190)
T cd05147          90 KSHVLVMEFIGDDGWAAPRLK--DAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH----DGKLYIIDVSQ  163 (190)
T ss_pred             cCCEEEEEEeCCCCCcchhhh--cCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE----CCcEEEEEccc
Confidence            345899999999887665433  36799999999999999999999 799999999999999998    36799999999


Q ss_pred             ceec
Q 014171          116 SDFI  119 (429)
Q Consensus       116 a~~~  119 (429)
                      |...
T Consensus       164 a~~~  167 (190)
T cd05147         164 SVEH  167 (190)
T ss_pred             cccC
Confidence            8754

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]

Probab=99.51  E-value=1.4e-13  Score=143.39  Aligned_cols=130  Identities=25%  Similarity=0.382  Sum_probs=111.1

Q ss_pred             eccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeec----CCCCCEE
Q 014171           34 VLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA----KEDSSLK  109 (429)
Q Consensus        34 ~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~----~~~~~~k  109 (429)
                      +.+..++||+||.+.|+|++++.  ..+.+++..+..++.|++..++.||..+||||||||+|+++...    ....-++
T Consensus       764 ~~~~~S~lv~ey~~~Gtlld~~N--~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~  841 (974)
T KOG1166|consen  764 VFQNASVLVSEYSPYGTLLDLIN--TNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLY  841 (974)
T ss_pred             ccCCcceeeeeccccccHHHhhc--cCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceE
Confidence            34567899999999999999995  55789999999999999999999999999999999999999742    2345689


Q ss_pred             Eeecccceecc---CCCcccccccCCcccccccccCCC-CCCcchHHHHHHHHHHhhCCC
Q 014171          110 ATDFGLSDFIK---PGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRR  165 (429)
Q Consensus       110 L~Dfg~a~~~~---~~~~~~~~~g~~~y~aPE~~~~~~-~~~~DiwslG~il~~l~~g~~  165 (429)
                      |+|||.|..+.   .+......++|-.+-++|...|.. +..+|.|.++-++|-|+.|+.
T Consensus       842 lIDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y  901 (974)
T KOG1166|consen  842 LIDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY  901 (974)
T ss_pred             EEecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence            99999986543   444556678888999999998754 889999999999999999954

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.50  E-value=1e-14  Score=129.82  Aligned_cols=101  Identities=23%  Similarity=0.264  Sum_probs=74.7

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...++||||++|.+|.+..      .+++.    ...+++.+|..||+.|++|||+||+||+++.   ++ ++|+|||.+
T Consensus       116 ~~~~lvmEyi~G~tL~~~~------~~~~~----~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~---~g-i~liDfg~~  181 (232)
T PRK10359        116 HTYIMLIEYIEGVELNDMP------EISED----VKAKIKASIESLHQHGMVSGDPHKGNFIVSK---NG-LRIIDLSGK  181 (232)
T ss_pred             CCeEEEEEEECCccHHHhh------hccHH----HHHHHHHHHHHHHHcCCccCCCChHHEEEeC---CC-EEEEECCCc
Confidence            3568999999999997763      23332    4569999999999999999999999999983   55 999999987


Q ss_pred             eeccCCCcccccccCCcccccccccCCCCCCcchHHHHHHHHHHh
Q 014171          117 DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILL  161 (429)
Q Consensus       117 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~DiwslG~il~~l~  161 (429)
                      ...........          =++...+..++|+||+|+++....
T Consensus       182 ~~~~e~~a~d~----------~vler~y~~~~di~~lg~~~~~~~  216 (232)
T PRK10359        182 RCTAQRKAKDR----------IDLERHYGIKNEIKDLGYYLLIYK  216 (232)
T ss_pred             ccccchhhHHH----------HHHHhHhcccccccceeEeehHHH
Confidence            64432211110          012334567899999999887654

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=99.48  E-value=1.2e-13  Score=121.58  Aligned_cols=77  Identities=17%  Similarity=0.189  Sum_probs=66.1

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~-~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ..|+|||||.|+++.......  ..+++..+..++.|++.++.++|+ .||+||||||+||+++    ++.++|+|||+|
T Consensus        91 ~~~lVmE~~~g~~~~~~~l~~--~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~----~~~~~liDFG~a  164 (190)
T cd05145          91 KNVLVMEFIGDDGSPAPRLKD--VPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH----DGKPYIIDVSQA  164 (190)
T ss_pred             CCEEEEEEecCCCchhhhhhh--ccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE----CCCEEEEEcccc
Confidence            358999999998765543332  578899999999999999999999 9999999999999997    578999999999


Q ss_pred             eecc
Q 014171          117 DFIK  120 (429)
Q Consensus       117 ~~~~  120 (429)
                      ....
T Consensus       165 ~~~~  168 (190)
T cd05145         165 VELD  168 (190)
T ss_pred             eecC
Confidence            7654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>KOG0036 consensus Predicted mitochondrial carrier protein [Nucleotide transport and metabolism]

Probab=99.44  E-value=7.1e-13  Score=122.39  Aligned_cols=131  Identities=29%  Similarity=0.450  Sum_probs=112.0

Q ss_pred             chHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCC-CccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccc
Q 014171          266 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW-KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD  344 (429)
Q Consensus       266 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~-~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~  344 (429)
                      .++.-.+++..|+.+|.+++|+++..++.+.+.. ++. ++..+-...+++..|.|.||.++|+||...+      ... 
T Consensus         9 ~~er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~-l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~------~~~-   80 (463)
T KOG0036|consen    9 DEERDIRIRCLFKELDSKNDGQVDLDQLEKGLEK-LDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYL------DNK-   80 (463)
T ss_pred             cHHHHHHHHHHHHHhccCCCCceeHHHHHHHHHh-cCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHH------HHh-
Confidence            3444567889999999999999999999999865 443 4667778899999999999999999998643      332 


Q ss_pred             cHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          345 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       345 ~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                          +.++...|..+|.|+||.|+.+|+.+.++++|.      .+.+++.+|.++++.|+++||.+.+.-
T Consensus        81 ----E~~l~~~F~~iD~~hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~~d~~g~~~I~~~e~rd~~ll  146 (463)
T KOG0036|consen   81 ----ELELYRIFQSIDLEHDGKIDPNEIWRYLKDLGIQLSDEKAAKFFEHMDKDGKATIDLEEWRDHLLL  146 (463)
T ss_pred             ----HHHHHHHHhhhccccCCccCHHHHHHHHHHhCCccCHHHHHHHHHHhccCCCeeeccHHHHhhhhc
Confidence                235778999999999999999999999999984      788999999999999999999988753

>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.43  E-value=5.9e-13  Score=119.81  Aligned_cols=140  Identities=27%  Similarity=0.355  Sum_probs=109.3

Q ss_pred             HHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhh-----hcc
Q 014171          268 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ-----LEE  342 (429)
Q Consensus       268 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~-----~~~  342 (429)
                      +...++..+|..+|.+++|.|+..|+..++.... ......++.+-+...|.|+||.|+|+|+...+.....     ...
T Consensus        74 e~~~rl~~l~~~iD~~~Dgfv~~~El~~wi~~s~-k~~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~~~~~~~d~  152 (325)
T KOG4223|consen   74 ESQERLGKLVPKIDSDSDGFVTESELKAWIMQSQ-KKYVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVDLPDEFPDE  152 (325)
T ss_pred             hhHHHHHHHHhhhcCCCCCceeHHHHHHHHHHHH-HHHHHHHHHHHHHHhccCccceeeHHHhhhhhhhcccCccccccc
Confidence            3456788899999999999999999999987643 3334567778888999999999999999987764211     111


Q ss_pred             ccc---HHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC-------HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          343 HDS---EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS-------IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       343 ~~~---~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~-------~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                      ...   .+....=+..|++.|.|++|.+|++||..++.....       +.+.+..+|.|+||+|+++||+.=|..
T Consensus       153 e~~~~~~km~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~  228 (325)
T KOG4223|consen  153 EDNEEYKKMIARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYS  228 (325)
T ss_pred             hhcHHHHHHHHHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhh
Confidence            111   112223457899999999999999999999887652       788999999999999999999966543

>KOG4223 consensus Reticulocalbin, calumenin, DNA supercoiling factor, and related Ca2+-binding proteins of the CREC family (EF-Hand protein superfamily) [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]

Probab=99.39  E-value=1e-12  Score=118.33  Aligned_cols=134  Identities=31%  Similarity=0.417  Sum_probs=104.0

Q ss_pred             hhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHH
Q 014171          271 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL  350 (429)
Q Consensus       271 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~  350 (429)
                      .+-.+.|+..|.|+||.++.+||...|+-.--..+...-|.+-+...|.|+||.|+++||+.-+.....  .....+|..
T Consensus       163 ~rDe~rFk~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~--~~~epeWv~  240 (325)
T KOG4223|consen  163 ARDEERFKAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEG--NEEEPEWVL  240 (325)
T ss_pred             HHHHHHHhhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccC--CCCCccccc
Confidence            345667999999999999999999998543323344556788889999999999999999987765544  222234433


Q ss_pred             HHH-HHhccccCCCCCccCHHHHHhhhcCCC------CHHHHHHHhCCCCCCcccHHHHHHHH
Q 014171          351 RSQ-AAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLL  406 (429)
Q Consensus       351 ~l~-~~F~~~D~~~~G~I~~~el~~~~~~~~------~~~~~~~~~d~~~dg~i~~~ef~~~~  406 (429)
                      .-+ +.|..+|+|+||+++.+|++.-+...+      ++..++.+.|.|+||++|++|.+.-.
T Consensus       241 ~Ere~F~~~~DknkDG~L~~dEl~~WI~P~~~d~A~~EA~hL~~eaD~dkD~kLs~eEIl~~~  303 (325)
T KOG4223|consen  241 TEREQFFEFRDKNKDGKLDGDELLDWILPSEQDHAKAEARHLLHEADEDKDGKLSKEEILEHY  303 (325)
T ss_pred             ccHHHHHHHhhcCCCCccCHHHHhcccCCCCccHHHHHHHHHhhhhccCccccccHHHHhhCc
Confidence            333 456788999999999999997665554      37889999999999999999988644

>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]

Probab=99.37  E-value=7.3e-13  Score=135.96  Aligned_cols=189  Identities=26%  Similarity=0.420  Sum_probs=154.8

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...+||++|..||+|...++..  +..+++-++.++..+..+++|||...+.|+|++|.|++..   ..++.++.+||..
T Consensus       877 sP~~L~~~~~~~~~~~Skl~~~--~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~---~~gh~~l~~~~t~  951 (1205)
T KOG0606|consen  877 SPLPLVGHYLNGGDLPSKLHNS--GCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIA---YDGHRPLTDFGTL  951 (1205)
T ss_pred             CCcchhhHHhccCCchhhhhcC--CCcccccccchhHHHHhhhhccccchhhcccccccchhhc---ccCCcccCccccc
Confidence            3457899999999999988554  6788889999999999999999999999999999999998   5888999999743


Q ss_pred             eeccC---------------------C-----------CcccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhC
Q 014171          117 DFIKP---------------------G-----------KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCG  163 (429)
Q Consensus       117 ~~~~~---------------------~-----------~~~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g  163 (429)
                      .....                     .           .......||+.|.+||.+.+. ....+|+|+.|+++++.++|
T Consensus       952 ~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g 1031 (1205)
T KOG0606|consen  952 SKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTG 1031 (1205)
T ss_pred             cccccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcC
Confidence            21110                     0           001234689999999998764 47889999999999999999


Q ss_pred             CCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHH---HHhCCCccccCCCC
Q 014171          164 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA---QALSHPWVREGGDA  231 (429)
Q Consensus       164 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~---e~l~h~~~~~~~~~  231 (429)
                      .+||...+.+.....+.......+..+ ...+..+++++.+++..+|.+|..+.   ++-.|+||+.....
T Consensus      1032 ~pp~na~tpq~~f~ni~~~~~~~p~g~-~~~s~~aq~~~~~ll~~~~~qr~~a~~~~e~k~~~~~~~~~~~ 1101 (1205)
T KOG0606|consen 1032 IPPFNAETPQQIFENILNRDIPWPEGP-EEGSYEAQDLINRLLTEEPTQRLGAKGAAEVKGHPFFQDVDWE 1101 (1205)
T ss_pred             CCCCCCcchhhhhhccccCCCCCCCCc-cccChhhhhhhhhhhccCchhccCcccccccccCCccCCCCcc
Confidence            999999999999988887765544322 34678899999999999999999877   88899999986543

>KOG0038 consensus Ca2+-binding kinase interacting protein (KIP) (EF-Hand protein superfamily) [General function prediction only]

Probab=99.36  E-value=2e-12  Score=102.03  Aligned_cols=135  Identities=22%  Similarity=0.411  Sum_probs=99.1

Q ss_pred             cchHHHhhhhccccccCCCC-----CC------cccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHH
Q 014171          265 LDDEELADLRDQFDAIDVDK-----NG------SISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAA  333 (429)
Q Consensus       265 ~~~~~~~~l~~~F~~~D~~~-----~G------~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~  333 (429)
                      ++..++-++...|..+.++-     .|      .+..+.+.++-  .+..+|-.   +++-+.+..|++|.++|++|+.+
T Consensus        22 FtrKdIlrl~~Rf~~L~P~lVP~~~~~~~~~~v~vp~e~i~kMP--ELkenpfk---~ri~e~FSeDG~GnlsfddFlDm   96 (189)
T KOG0038|consen   22 FTRKDILRLHKRFYELAPHLVPTDMTGNRPPIVKVPFELIEKMP--ELKENPFK---RRICEVFSEDGRGNLSFDDFLDM   96 (189)
T ss_pred             ccHHHHHHHHHHHHHhCcccccccccCCCCCceeecHHHHhhCh--hhhcChHH---HHHHHHhccCCCCcccHHHHHHH
Confidence            45566666666666553221     11      33444443331  23333333   56677778899999999999999


Q ss_pred             HhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC-----------HHHHHHHhCCCCCCcccHHHH
Q 014171          334 TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS-----------IDPLLEEADIDKDGRISLSEF  402 (429)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~-----------~~~~~~~~d~~~dg~i~~~ef  402 (429)
                      .+..+...+.+     .++..||+.||-|+|++|..++|.+.+..+..           ++++++++|.||||++++.||
T Consensus        97 fSV~sE~APrd-----lK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~eLs~eEv~~i~ekvieEAD~DgDgkl~~~eF  171 (189)
T KOG0038|consen   97 FSVFSEMAPRD-----LKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRDELSDEEVELICEKVIEEADLDGDGKLSFAEF  171 (189)
T ss_pred             HHHHHhhChHH-----hhhhheeEEeecCCCCcccHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHhcCCCCCcccHHHH
Confidence            98887776643     45778999999999999999999988876641           788999999999999999999


Q ss_pred             HHHHHhc
Q 014171          403 RRLLRTA  409 (429)
Q Consensus       403 ~~~~~~~  409 (429)
                      ..++.++
T Consensus       172 e~~i~ra  178 (189)
T KOG0038|consen  172 EHVILRA  178 (189)
T ss_pred             HHHHHhC
Confidence            9988653

>KOG1266 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.30  E-value=5.3e-12  Score=114.27  Aligned_cols=178  Identities=14%  Similarity=0.145  Sum_probs=122.3

Q ss_pred             ceeEeeecCCCChHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCcEEEeecCCCCCEEEeecc
Q 014171           39 KLRRIRLCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFG  114 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~lH~~~--i~H~dikp~Nil~~~~~~~~~~kL~Dfg  114 (429)
                      ..+++||++-|++..+|.+.  ....+.+....+++.||+.||.|||+..  |+|+++..+.|++.   .++-+|++--.
T Consensus       147 viFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~~PpiihgnlTc~tifiq---~ngLIkig~~a  223 (458)
T KOG1266|consen  147 VIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSCDPPIIHGNLTCDTIFIQ---HNGLIKIGSVA  223 (458)
T ss_pred             eEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhccCCccccCCcchhheeec---CCceEEecccC
Confidence            34689999999999999654  3466899999999999999999999987  99999999999998   46667654211


Q ss_pred             cceeccCC------CcccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhhCCCCCCC-CChhHHHHHHHhcCCCC
Q 014171          115 LSDFIKPG------KKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDF  186 (429)
Q Consensus       115 ~a~~~~~~------~~~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~-~~~~~~~~~i~~~~~~~  186 (429)
                       -......      ....-..+-++|.|||.=. .+.+.++|||++|+...+|..+..--.. .+....-..+..-... 
T Consensus       224 -p~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemailEiq~tnseS~~~~ee~ia~~i~~-  301 (458)
T KOG1266|consen  224 -PDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAILEIQSTNSESKVEVEENIANVIIG-  301 (458)
T ss_pred             -ccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHHheeccCCCcceeehhhhhhhheee-
Confidence             0111000      0011224567899998654 2446789999999999999887543211 1111111111111110 


Q ss_pred             CCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcccc
Q 014171          187 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE  227 (429)
Q Consensus       187 ~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~  227 (429)
                            .-..--++++.+|++..|..||++.+++.||..=+
T Consensus       302 ------len~lqr~~i~kcl~~eP~~rp~ar~llfHpllfe  336 (458)
T KOG1266|consen  302 ------LENGLQRGSITKCLEGEPNGRPDARLLLFHPLLFE  336 (458)
T ss_pred             ------ccCccccCcCcccccCCCCCCcchhhhhcCceeee
Confidence                  01223467899999999999999999999998544

>PRK10345 hypothetical protein; Provisional

Probab=99.28  E-value=1e-11  Score=110.09  Aligned_cols=71  Identities=18%  Similarity=0.131  Sum_probs=56.3

Q ss_pred             eEeee--cCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHH-HHHHHCCCeecCCCCCcEEEeecC-CCCCEEEeecccc
Q 014171           41 RRIRL--CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA-AECHLHGLVHRDMKPENFLFKSAK-EDSSLKATDFGLS  116 (429)
Q Consensus        41 lv~e~--~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL-~~lH~~~i~H~dikp~Nil~~~~~-~~~~~kL~Dfg~a  116 (429)
                      +|+||  |.+|+|.+++.+   +.+++.  ..++.|++.++ +|||+++|+||||||+||+++..+ ....++|+|++.+
T Consensus        82 ~I~e~~G~~~~tL~~~l~~---~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~  156 (210)
T PRK10345         82 VIADFDGKPSITLTEFAEQ---CRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE  156 (210)
T ss_pred             EEecCCCCcchhHHHHHHc---ccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence            68999  668999999944   346666  35688888887 999999999999999999998533 2348999995433

>smart00090 RIO RIO-like kinase

Probab=99.28  E-value=5.9e-12  Score=114.30  Aligned_cols=77  Identities=21%  Similarity=0.234  Sum_probs=65.2

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC-CeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG-LVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~-i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ..|+||||+.|++|.......  ..+....+..++.|++.+|.+||+.| ++||||||+||+++    ++.++|+|||.|
T Consensus       122 ~~~lV~E~~~g~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~----~~~i~LiDFg~a  195 (237)
T smart00090      122 RNVLVMEFIGGDGLPAPRLKD--VEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH----DGKVVIIDVSQS  195 (237)
T ss_pred             CceEEEEEecCCccccccccc--CCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE----CCCEEEEEChhh
Confidence            468999999998887655332  45677778899999999999999999 99999999999998    467999999988


Q ss_pred             eecc
Q 014171          117 DFIK  120 (429)
Q Consensus       117 ~~~~  120 (429)
                      ....
T Consensus       196 ~~~~  199 (237)
T smart00090      196 VELD  199 (237)
T ss_pred             hccC
Confidence            7543

>PLN02964 phosphatidylserine decarboxylase

Probab=99.23  E-value=2.7e-11  Score=122.09  Aligned_cols=104  Identities=21%  Similarity=0.307  Sum_probs=87.5

Q ss_pred             ccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCC-CCccHHH---HHHHHHHhcCCCCCcccHHHHHHHHhhhhh
Q 014171          264 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP-WKLKESR---VLEILQAIDCNTDGLVDFSEFVAATLHVHQ  339 (429)
Q Consensus       264 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~-~~~~~~~---~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~  339 (429)
                      .+...|+++++++|+.+|.|++|++    +..++ +.+| ..+++.+   ++++|+.+|.|++|.|+|+||+.++.....
T Consensus       136 ~f~~kqi~elkeaF~lfD~dgdG~i----Lg~il-rslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~  210 (644)
T PLN02964        136 DFVTQEPESACESFDLLDPSSSNKV----VGSIF-VSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFGN  210 (644)
T ss_pred             hccHHHHHHHHHHHHHHCCCCCCcC----HHHHH-HHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcc
Confidence            3456677899999999999999997    77777 5588 5888877   899999999999999999999998874322


Q ss_pred             hcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcC
Q 014171          340 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL  378 (429)
Q Consensus       340 ~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~  378 (429)
                         ...   .+++..+|+.||+|++|+|+.+||+.++..
T Consensus       211 ---~~s---eEEL~eaFk~fDkDgdG~Is~dEL~~vL~~  243 (644)
T PLN02964        211 ---LVA---ANKKEELFKAADLNGDGVVTIDELAALLAL  243 (644)
T ss_pred             ---CCC---HHHHHHHHHHhCCCCCCcCCHHHHHHHHHh
Confidence               122   346889999999999999999999999877

>PRK14879 serine/threonine protein kinase; Provisional

Probab=99.18  E-value=7e-11  Score=105.69  Aligned_cols=74  Identities=24%  Similarity=0.425  Sum_probs=64.1

Q ss_pred             ccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecc
Q 014171           35 LPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG  114 (429)
Q Consensus        35 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg  114 (429)
                      .....++||||++|++|.+.+...     .. ....++.+++.+|.++|+.|++|||++|.||+++    .+.++|+|||
T Consensus        70 ~~~~~~lv~e~~~G~~L~~~~~~~-----~~-~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~----~~~~~liDf~  139 (211)
T PRK14879         70 DPENFIIVMEYIEGEPLKDLINSN-----GM-EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS----GGKIYLIDFG  139 (211)
T ss_pred             eCCCCEEEEEEeCCcCHHHHHHhc-----cH-HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE----CCCEEEEECC
Confidence            445678999999999999988543     12 7888999999999999999999999999999998    5679999999


Q ss_pred             ccee
Q 014171          115 LSDF  118 (429)
Q Consensus       115 ~a~~  118 (429)
                      .+..
T Consensus       140 ~a~~  143 (211)
T PRK14879        140 LAEF  143 (211)
T ss_pred             cccC
Confidence            8764

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=99.16  E-value=6.8e-11  Score=104.76  Aligned_cols=70  Identities=30%  Similarity=0.491  Sum_probs=60.3

Q ss_pred             cccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           36 PLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        36 ~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      +...++||||++|++|.+.+....  .       .++.+++.+|.+||+.|++|+|++|.||+++    .+.++++|||.
T Consensus        69 ~~~~~lv~e~~~g~~l~~~~~~~~--~-------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~----~~~~~liDfg~  135 (199)
T TIGR03724        69 PDNKTIVMEYIEGKPLKDVIEEGN--D-------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR----DDKLYLIDFGL  135 (199)
T ss_pred             CCCCEEEEEEECCccHHHHHhhcH--H-------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE----CCcEEEEECCC
Confidence            445689999999999998774321  1       7899999999999999999999999999998    57899999998


Q ss_pred             cee
Q 014171          116 SDF  118 (429)
Q Consensus       116 a~~  118 (429)
                      +..
T Consensus       136 a~~  138 (199)
T TIGR03724       136 GKY  138 (199)
T ss_pred             CcC
Confidence            765

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E

Probab=99.16  E-value=4.1e-11  Score=85.83  Aligned_cols=55  Identities=47%  Similarity=0.740  Sum_probs=50.4

Q ss_pred             HHHHhccccCCCCCccCHHHHHhhhcCCCC----------HHHHHHHhCCCCCCcccHHHHHHHH
Q 014171          352 SQAAFEKFDIDRDGFITPEELRMHTGLKGS----------IDPLLEEADIDKDGRISLSEFRRLL  406 (429)
Q Consensus       352 l~~~F~~~D~~~~G~I~~~el~~~~~~~~~----------~~~~~~~~d~~~dg~i~~~ef~~~~  406 (429)
                      ++++|+.+|+|++|+|+.+||+.++...+.          +..+++.+|.|+||.|+|+||+++|
T Consensus         2 l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~   66 (66)
T PF13499_consen    2 LKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM   66 (66)
T ss_dssp             HHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred             HHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence            678999999999999999999999988872          6677999999999999999999886

...

>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13

Probab=99.15  E-value=6.2e-11  Score=89.23  Aligned_cols=70  Identities=24%  Similarity=0.411  Sum_probs=62.7

Q ss_pred             HHHhhhhccccccCC-CCCCcccHHHHHHHHHhhCCCCccH-HHHHHHHHHhcCCCCCcccHHHHHHHHhhh
Q 014171          268 EELADLRDQFDAIDV-DKNGSISLEEMRQALAKDLPWKLKE-SRVLEILQAIDCNTDGLVDFSEFVAATLHV  337 (429)
Q Consensus       268 ~~~~~l~~~F~~~D~-~~~G~i~~~el~~~l~~~~~~~~~~-~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~  337 (429)
                      .-+..+.++|+.+|. +++|+|+..||+.++++.+|...++ .+++.+++.+|.|+||.|+|+||+..+..+
T Consensus         5 ~ai~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l   76 (89)
T cd05022           5 KAIETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGEL   76 (89)
T ss_pred             HHHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            445778999999999 9999999999999997668887888 899999999999999999999999876544

S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=99.15  E-value=1.1e-10  Score=106.14  Aligned_cols=70  Identities=21%  Similarity=0.327  Sum_probs=58.1

Q ss_pred             ceeEeeecCC-CChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           39 KLRRIRLCEG-GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        39 ~~lv~e~~~g-g~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      .++|||+++| ++|.+++..   ..+++..    +.||+.+|.+||++||+||||||.|||++.   ++.++|+|||.+.
T Consensus       121 ~~lV~e~l~G~~~L~~~l~~---~~l~~~~----~~~i~~~l~~lH~~GI~HrDlkp~NILv~~---~~~v~LIDfg~~~  190 (239)
T PRK01723        121 ADILIERIEGARDLVALLQE---APLSEEQ----WQAIGQLIARFHDAGVYHADLNAHNILLDP---DGKFWLIDFDRGE  190 (239)
T ss_pred             eeEEEEecCCCCCHHHHHhc---CCCCHHH----HHHHHHHHHHHHHCCCCCCCCCchhEEEcC---CCCEEEEECCCcc
Confidence            3599999998 688877633   3566543    578999999999999999999999999983   5689999999876


Q ss_pred             e
Q 014171          118 F  118 (429)
Q Consensus       118 ~  118 (429)
                      .
T Consensus       191 ~  191 (239)
T PRK01723        191 L  191 (239)
T ss_pred             c
Confidence            4

>KOG0044 consensus Ca2+ sensor (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=99.15  E-value=1e-10  Score=100.36  Aligned_cols=116  Identities=25%  Similarity=0.260  Sum_probs=93.8

Q ss_pred             hhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcc-----ccc
Q 014171          271 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE-----HDS  345 (429)
Q Consensus       271 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~-----~~~  345 (429)
                      .-...+|+.+|.|++|.|+-.||..+|.. +-..-.++.+...|+.+|.|++|.|+.+|++.++..+..+..     ...
T Consensus        64 ~y~~~vF~~fD~~~dg~i~F~Efi~als~-~~rGt~eekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~  142 (193)
T KOG0044|consen   64 KYAELVFRTFDKNKDGTIDFLEFICALSL-TSRGTLEEKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDE  142 (193)
T ss_pred             HHHHHHHHHhcccCCCCcCHHHHHHHHHH-HcCCcHHHHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCccc
Confidence            34567899999999999999999999965 334445678899999999999999999999998877765544     223


Q ss_pred             HHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCCHHHHHH
Q 014171          346 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLE  387 (429)
Q Consensus       346 ~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~~~~~~~  387 (429)
                      ........++|+.+|.|+||.||.+||.........+-.++.
T Consensus       143 ~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~d~~i~~~l~  184 (193)
T KOG0044|consen  143 ETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKADPSILRALE  184 (193)
T ss_pred             ccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhhCHHHHHHhh
Confidence            334567889999999999999999999998877765555543

>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13

Probab=99.15  E-value=8.5e-11  Score=88.46  Aligned_cols=62  Identities=16%  Similarity=0.269  Sum_probs=55.7

Q ss_pred             HHHHHHHhccccC-CCCCccCHHHHHhhhcC-CC-------CHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          349 HLRSQAAFEKFDI-DRDGFITPEELRMHTGL-KG-------SIDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       349 ~~~l~~~F~~~D~-~~~G~I~~~el~~~~~~-~~-------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      ...++.+|+.||+ +++|+|+.+||+.+++. ++       +++.+++.+|.|+||.|+|+||+.+|.+.-
T Consensus         7 i~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l~   77 (89)
T cd05022           7 IETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGELA   77 (89)
T ss_pred             HHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence            4568899999999 99999999999999987 55       288899999999999999999999998754

S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=99.13  E-value=1e-10  Score=119.33  Aligned_cols=70  Identities=30%  Similarity=0.505  Sum_probs=61.4

Q ss_pred             cccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           36 PLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        36 ~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      +...++||||++|++|.+++.          ....++.+++.+|.|||+.|++||||||+||+++    ++.++|+|||+
T Consensus       408 ~~~~~lv~E~~~g~~L~~~l~----------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl~----~~~~~liDFGl  473 (535)
T PRK09605        408 PEEKTIVMEYIGGKDLKDVLE----------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIVR----DDRLYLIDFGL  473 (535)
T ss_pred             CCCCEEEEEecCCCcHHHHHH----------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEEE----CCcEEEEeCcc
Confidence            445789999999999998874          3467899999999999999999999999999995    57899999999


Q ss_pred             ceec
Q 014171          116 SDFI  119 (429)
Q Consensus       116 a~~~  119 (429)
                      ++..
T Consensus       474 a~~~  477 (535)
T PRK09605        474 GKYS  477 (535)
T ss_pred             cccC
Confidence            8653

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=99.11  E-value=1.2e-10  Score=103.14  Aligned_cols=73  Identities=21%  Similarity=0.277  Sum_probs=61.1

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...++||||+.|++|.....        ......++.+++.++.++|+.||+||||+|+||+++   .++.++|+|||.+
T Consensus       104 ~~~~lv~e~~~g~~L~~~~~--------~~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~---~~~~~~liDfg~~  172 (198)
T cd05144         104 NRHAVVMEYIDGVELYRVRV--------LEDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVD---DDEKIYIIDWPQM  172 (198)
T ss_pred             CCceEEEEEeCCcchhhccc--------cccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEc---CCCcEEEEECCcc
Confidence            34589999999999876431        134567889999999999999999999999999998   4789999999998


Q ss_pred             eecc
Q 014171          117 DFIK  120 (429)
Q Consensus       117 ~~~~  120 (429)
                      ....
T Consensus       173 ~~~~  176 (198)
T cd05144         173 VSTD  176 (198)
T ss_pred             ccCC
Confidence            6554

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=99.10  E-value=9.9e-11  Score=114.57  Aligned_cols=181  Identities=23%  Similarity=0.256  Sum_probs=137.5

Q ss_pred             eeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHH----HHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           40 LRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR----VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        40 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~----aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      ++=+|+|. .+|..+.... ...+++..++..+.+...    ||.++|..+++|-|+||.||+...  +....+++|||+
T Consensus       194 fiqtE~~~-~sl~~~~~~~-~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~--~~~s~~~~df~~  269 (524)
T KOG0601|consen  194 FIQTELCG-ESLQSYCHTP-CNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTS--DWTSCKLTDFGL  269 (524)
T ss_pred             eeeecccc-chhHHhhhcc-cccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheeccc--ccceeecCCcce
Confidence            45578885 7888777544 355899999999999999    999999999999999999999984  227789999999


Q ss_pred             ceeccCCCcc------cccccCCcccccccccCCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCC
Q 014171          116 SDFIKPGKKF------QDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK  189 (429)
Q Consensus       116 a~~~~~~~~~------~~~~g~~~y~aPE~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  189 (429)
                      ...+......      ....|...|++||.+++-++...|++++|.+..+..++..+....-..... .+-...  .+..
T Consensus       270 v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~-~~r~~~--ip~e  346 (524)
T KOG0601|consen  270 VSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWS-QLRQGY--IPLE  346 (524)
T ss_pred             eEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcc-cccccc--Cchh
Confidence            8877655422      112567789999999999999999999999999999987765433111111 000000  1222


Q ss_pred             CCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcccc
Q 014171          190 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE  227 (429)
Q Consensus       190 ~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~  227 (429)
                      .....+.+....+..|+..+|..|++++.++.|+++..
T Consensus       347 ~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s  384 (524)
T KOG0601|consen  347 FCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHS  384 (524)
T ss_pred             hhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccc
Confidence            22345667777999999999999999999999999874

>KOG0377 consensus Protein serine/threonine phosphatase RDGC/PPEF, contains STphosphatase and EF-hand domains [Signal transduction mechanisms]

Probab=99.07  E-value=5.9e-10  Score=103.75  Aligned_cols=140  Identities=26%  Similarity=0.329  Sum_probs=107.2

Q ss_pred             hhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccH----
Q 014171          271 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE----  346 (429)
Q Consensus       271 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~----  346 (429)
                      .+|...|+.+|.+..|+|+......++...+|.+..=..+..-+..  .+.+|.+.|.+.+..+....-..+....    
T Consensus       464 sdL~~eF~~~D~~ksG~lsis~Wa~~mE~i~~L~LPWr~L~~kla~--~s~d~~v~Y~~~~~~l~~e~~~~ea~~slvet  541 (631)
T KOG0377|consen  464 SDLEDEFRKYDPKKSGKLSISHWAKCMENITGLNLPWRLLRPKLAN--GSDDGKVEYKSTLDNLDTEVILEEAGSSLVET  541 (631)
T ss_pred             hHHHHHHHhcChhhcCeeeHHHHHHHHHHHhcCCCcHHHhhhhccC--CCcCcceehHhHHHHhhhhhHHHHHHhHHHHH
Confidence            5688889999999999999999999998888887765444433333  3457799999998765543322221110    


Q ss_pred             --HHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC----------CHHHHHHHhCCCCCCcccHHHHHHHHHhcccc
Q 014171          347 --KWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----------SIDPLLEEADIDKDGRISLSEFRRLLRTASIS  412 (429)
Q Consensus       347 --~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~----------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~~  412 (429)
                        .....|..+|+.+|+|++|.|+.+||+.++...+          ++.++.+.+|.|+||.|+++||.+.++-..-.
T Consensus       542 LYr~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFrlvdr~  619 (631)
T KOG0377|consen  542 LYRNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFRLVDRR  619 (631)
T ss_pred             HHhchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHhhhcch
Confidence              0123477899999999999999999998876554          27888889999999999999999999876643

>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E

Probab=99.05  E-value=2.5e-10  Score=81.72  Aligned_cols=62  Identities=32%  Similarity=0.575  Sum_probs=52.2

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCCCCccH----HHHHHHHHHhcCCCCCcccHHHHHHHH
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKE----SRVLEILQAIDCNTDGLVDFSEFVAAT  334 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~----~~~~~l~~~~d~~~~g~I~~~eF~~~~  334 (429)
                      +++++|+.+|.|++|+|+.+||..++.. ++...+.    ..++.+|+.+|.|++|.|+|+||+.++
T Consensus         1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~-~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~   66 (66)
T PF13499_consen    1 RLKEAFKKFDKDGDGYISKEELRRALKH-LGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM   66 (66)
T ss_dssp             HHHHHHHHHSTTSSSEEEHHHHHHHHHH-TTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred             CHHHHHHHHcCCccCCCCHHHHHHHHHH-hcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence            4678899999999999999999999965 6654434    455666999999999999999998753

...

>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]

Probab=99.05  E-value=2.1e-09  Score=89.10  Aligned_cols=107  Identities=21%  Similarity=0.294  Sum_probs=76.8

Q ss_pred             hcccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhc
Q 014171          262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE  341 (429)
Q Consensus       262 ~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~  341 (429)
                      ....+..+   +.++|..+|. +.|.|+..+|..+|...+....+.+++.+.|+.+|.|++|+|+..+...++...   .
T Consensus        50 g~~~s~~e---i~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~~~~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~l---g  122 (160)
T COG5126          50 GFNPSEAE---INKLFEEIDA-GNETVDFPEFLTVMSVKLKRGDKEEELREAFKLFDKDHDGYISIGELRRVLKSL---G  122 (160)
T ss_pred             CCCCcHHH---HHHHHHhccC-CCCccCHHHHHHHHHHHhccCCcHHHHHHHHHHhCCCCCceecHHHHHHHHHhh---c
Confidence            33444444   3444666677 888888888888887766677778888888888888888888888888766532   2


Q ss_pred             ccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcC
Q 014171          342 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL  378 (429)
Q Consensus       342 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~  378 (429)
                      +...   .+.+...++.+|+|++|+|+.++|.+.+..
T Consensus       123 e~~~---deev~~ll~~~d~d~dG~i~~~eF~~~~~~  156 (160)
T COG5126         123 ERLS---DEEVEKLLKEYDEDGDGEIDYEEFKKLIKD  156 (160)
T ss_pred             ccCC---HHHHHHHHHhcCCCCCceEeHHHHHHHHhc
Confidence            2222   245677888888888888888888876543

>KOG2137 consensus Protein kinase [Signal transduction mechanisms]

Probab=99.04  E-value=1.3e-10  Score=115.40  Aligned_cols=158  Identities=22%  Similarity=0.278  Sum_probs=112.6

Q ss_pred             HHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcc----------cccccCCcccc
Q 014171           68 AAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF----------QDIVGSAYYVA  136 (429)
Q Consensus        68 ~~~i~~qil~aL~~lH~-~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~----------~~~~g~~~y~a  136 (429)
                      ...=+.+++.|+.|+|. .++||++|.|++|.++   .++.+||+.|+++.....+..+          .-......|.|
T Consensus       101 ~f~nl~~v~dgl~flh~sAk~VH~ni~p~~i~~n---a~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~a  177 (700)
T KOG2137|consen  101 GFANLGNVADGLAFLHRSAKVVHGNIQPEAIVVN---ANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLA  177 (700)
T ss_pred             hhhhhhcccchhhhhccCcceeecccchhheeec---cCcceeeccchhhhccCCCCccccccCCCCCChhhccCccccc
Confidence            33445566789999997 4899999999999999   6889999999987655432111          01123457999


Q ss_pred             cccccCCC-CCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCC-CCCCCCCHHHHHHHHHhccCCccCc
Q 014171          137 PEVLKRKS-GPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRR-KPWPSISNSAKDFVKKLLVKDPRAR  213 (429)
Q Consensus       137 PE~~~~~~-~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~li~~~l~~dp~~R  213 (429)
                      ||.+.... +.++|++|+||++|.+.. |+..+........+. .......... ..-..++.++++=+.+++..++..|
T Consensus       178 pE~~~~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~~~~~-~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~~~~r  256 (700)
T KOG2137|consen  178 PEYLLGTTNTPASDVFSLGVLIYTIYNGGKSIIAANGGLLSYS-FSRNLLNAGAFGYSNNLPSELRESLKKLLNGDSAVR  256 (700)
T ss_pred             chhhccccccccccceeeeeEEEEEecCCcchhhccCCcchhh-hhhcccccccccccccCcHHHHHHHHHHhcCCcccC
Confidence            99987643 789999999999999994 555544332222221 1111111111 1114689999999999999999999


Q ss_pred             CCHHHHhCCCccccCC
Q 014171          214 LTAAQALSHPWVREGG  229 (429)
Q Consensus       214 ~s~~e~l~h~~~~~~~  229 (429)
                      |++..++..+||....
T Consensus       257 p~~~~l~~~~ff~D~~  272 (700)
T KOG2137|consen  257 PTLDLLLSIPFFSDPG  272 (700)
T ss_pred             cchhhhhcccccCCch
Confidence            9999999999998754

>KOG0037 consensus Ca2+-binding protein, EF-Hand protein superfamily [Signal transduction mechanisms]

Probab=99.04  E-value=4e-10  Score=96.18  Aligned_cols=93  Identities=26%  Similarity=0.444  Sum_probs=79.6

Q ss_pred             HHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHH
Q 014171          269 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKW  348 (429)
Q Consensus       269 ~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~  348 (429)
                      -+..++.+|+.+|+|++|.|+..||..+|.. +|+.++.+-++.+++.+|.-++|.|.|++|+.++..+..         
T Consensus       122 ~i~~Wr~vF~~~D~D~SG~I~~sEL~~Al~~-~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~L~~---------  191 (221)
T KOG0037|consen  122 YINQWRNVFRTYDRDRSGTIDSSELRQALTQ-LGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVVLQR---------  191 (221)
T ss_pred             HHHHHHHHHHhcccCCCCcccHHHHHHHHHH-cCcCCCHHHHHHHHHHhccccCCceeHHHHHHHHHHHHH---------
Confidence            3567899999999999999999999999955 999999999999999999888999999999998765533         


Q ss_pred             HHHHHHHhccccCCCCCccC--HHHHHh
Q 014171          349 HLRSQAAFEKFDIDRDGFIT--PEELRM  374 (429)
Q Consensus       349 ~~~l~~~F~~~D~~~~G~I~--~~el~~  374 (429)
                         +-++|+.+|++.+|.|+  .+++..
T Consensus       192 ---lt~~Fr~~D~~q~G~i~~~y~dfl~  216 (221)
T KOG0037|consen  192 ---LTEAFRRRDTAQQGSITISYDDFLQ  216 (221)
T ss_pred             ---HHHHHHHhccccceeEEEeHHHHHH
Confidence               44589999999988774  455543

>cd05119 RIO RIO kinase family, catalytic domain

Probab=99.02  E-value=5e-10  Score=98.12  Aligned_cols=77  Identities=22%  Similarity=0.259  Sum_probs=60.6

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~-~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ..++||||+.||.+........  ... ..+..++.+++.++.++|. .||+|+||||+||+++    ++.++|+|||.+
T Consensus        89 ~~~lv~e~~~g~~~~~~~l~~~--~~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~----~~~~~liDfg~a  161 (187)
T cd05119          89 RHVLVMEFIGGDGIPAPRLKDV--RLL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD----DGKVYIIDVPQA  161 (187)
T ss_pred             CCEEEEEEeCCCCccChhhhhh--hhc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE----CCcEEEEECccc
Confidence            4589999999965543221111  111 6778999999999999999 9999999999999998    578999999998


Q ss_pred             eeccC
Q 014171          117 DFIKP  121 (429)
Q Consensus       117 ~~~~~  121 (429)
                      .....
T Consensus       162 ~~~~~  166 (187)
T cd05119         162 VEIDH  166 (187)
T ss_pred             ccccC
Confidence            76543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B

Probab=99.01  E-value=7.7e-10  Score=83.45  Aligned_cols=70  Identities=21%  Similarity=0.349  Sum_probs=61.0

Q ss_pred             HHHhhhhccccccC-CCCCC-cccHHHHHHHHHh----hCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhh
Q 014171          268 EELADLRDQFDAID-VDKNG-SISLEEMRQALAK----DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV  337 (429)
Q Consensus       268 ~~~~~l~~~F~~~D-~~~~G-~i~~~el~~~l~~----~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~  337 (429)
                      .-+..+.++|+.+| .|++| +|+.+||+.+|..    .+|..+++.+++++++.+|.|++|.|+|+||+.++...
T Consensus         5 ~~~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~   80 (88)
T cd05027           5 KAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMV   80 (88)
T ss_pred             HHHHHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            34567899999998 79999 5999999999954    37888899999999999999999999999999876543

S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i

>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B

Probab=99.00  E-value=7.4e-10  Score=83.54  Aligned_cols=63  Identities=19%  Similarity=0.312  Sum_probs=55.8

Q ss_pred             HHHHHHHhcccc-CCCCC-ccCHHHHHhhhcC-----CCC------HHHHHHHhCCCCCCcccHHHHHHHHHhccc
Q 014171          349 HLRSQAAFEKFD-IDRDG-FITPEELRMHTGL-----KGS------IDPLLEEADIDKDGRISLSEFRRLLRTASI  411 (429)
Q Consensus       349 ~~~l~~~F~~~D-~~~~G-~I~~~el~~~~~~-----~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~  411 (429)
                      ...++++|+.|| +|++| +|+.+||+.+++.     .|.      ++++++.+|.|+||.|+|+||+.++....+
T Consensus         7 ~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~~~   82 (88)
T cd05027           7 MVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMVTT   82 (88)
T ss_pred             HHHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHH
Confidence            456889999998 79999 5999999999998     652      899999999999999999999999987543

S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=98.96  E-value=1.9e-09  Score=94.01  Aligned_cols=78  Identities=17%  Similarity=0.198  Sum_probs=62.7

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHH-HHCCCeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC-HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~l-H~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      ...++||||+.++.+.....+  +..+++..+..+..+++.+|..| |..|++||||++.||++.    .+.+.|+|||.
T Consensus        97 ~~~~lvME~Ig~~~~~~~~Lk--d~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL~~----~~~v~iIDF~q  170 (197)
T cd05146          97 KKHVLVMSFIGDDQVPAPKLK--DAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNMLWH----DGKVWFIDVSQ  170 (197)
T ss_pred             cCCEEEEEEcCCCCccchhhh--ccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEE----CCcEEEEECCC
Confidence            567899999987655332222  23566677788899999999999 899999999999999997    46799999998


Q ss_pred             ceecc
Q 014171          116 SDFIK  120 (429)
Q Consensus       116 a~~~~  120 (429)
                      |....
T Consensus       171 av~~~  175 (197)
T cd05146         171 SVEPT  175 (197)
T ss_pred             ceeCC
Confidence            87654

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6

Probab=98.95  E-value=1.9e-09  Score=81.31  Aligned_cols=71  Identities=21%  Similarity=0.388  Sum_probs=61.9

Q ss_pred             hHHHhhhhccccccCC-CC-CCcccHHHHHHHHHh--hCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhh
Q 014171          267 DEELADLRDQFDAIDV-DK-NGSISLEEMRQALAK--DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV  337 (429)
Q Consensus       267 ~~~~~~l~~~F~~~D~-~~-~G~i~~~el~~~l~~--~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~  337 (429)
                      ++.+..+..+|+.+|. |+ +|+|+.+||..++++  .+|..++++++.++++.+|.|++|.|+|+||+..+..+
T Consensus         6 e~~~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l   80 (88)
T cd05029           6 DQAIGLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGAL   80 (88)
T ss_pred             HHHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence            4556778899999998 77 899999999999964  37999999999999999999999999999999766543

S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact

>PTZ00183 centrin; Provisional

Probab=98.95  E-value=4.2e-09  Score=89.52  Aligned_cols=101  Identities=18%  Similarity=0.272  Sum_probs=82.1

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHH
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR  351 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~  351 (429)
                      .+..+|..+|.+++|.|+..||..++............++.+|+.+|.+++|.|+.+||...+........      ...
T Consensus        54 ~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~l~------~~~  127 (158)
T PTZ00183         54 EIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDPREEILKAFRLFDDDKTGKISLKNLKRVAKELGETIT------DEE  127 (158)
T ss_pred             HHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCC------HHH
Confidence            46677888999999999999999988654455566788999999999999999999999987754321111      235


Q ss_pred             HHHHhccccCCCCCccCHHHHHhhhcC
Q 014171          352 SQAAFEKFDIDRDGFITPEELRMHTGL  378 (429)
Q Consensus       352 l~~~F~~~D~~~~G~I~~~el~~~~~~  378 (429)
                      +..+|..+|.|++|.|+.+||..++..
T Consensus       128 ~~~~~~~~d~~~~g~i~~~ef~~~~~~  154 (158)
T PTZ00183        128 LQEMIDEADRNGDGEISEEEFYRIMKK  154 (158)
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence            778999999999999999999988754

>KOG0027 consensus Calmodulin and related proteins (EF-Hand superfamily) [Signal transduction mechanisms]

Probab=98.94  E-value=5e-09  Score=88.30  Aligned_cols=99  Identities=25%  Similarity=0.269  Sum_probs=84.4

Q ss_pred             HHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC------
Q 014171          307 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------  380 (429)
Q Consensus       307 ~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~------  380 (429)
                      ..++.+.|..+|.+++|.|+-.|+-.++........      ...+..++..+|.|++|.|+.+||..++....      
T Consensus         7 ~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t------~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~   80 (151)
T KOG0027|consen    7 ILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPT------EEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDE   80 (151)
T ss_pred             HHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCC------HHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccccc
Confidence            357889999999999999999999988776654433      34678899999999999999999999887543      


Q ss_pred             -----CHHHHHHHhCCCCCCcccHHHHHHHHHhccc
Q 014171          381 -----SIDPLLEEADIDKDGRISLSEFRRLLRTASI  411 (429)
Q Consensus       381 -----~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~  411 (429)
                           ++.++|+.+|.|++|.|+.+|+..+|....-
T Consensus        81 ~~~~~el~eaF~~fD~d~~G~Is~~el~~~l~~lg~  116 (151)
T KOG0027|consen   81 EASSEELKEAFRVFDKDGDGFISASELKKVLTSLGE  116 (151)
T ss_pred             cccHHHHHHHHHHHccCCCCcCcHHHHHHHHHHhCC
Confidence                 4788999999999999999999999987653

>smart00027 EH Eps15 homology domain

Probab=98.94  E-value=2.3e-09  Score=82.83  Aligned_cols=73  Identities=22%  Similarity=0.350  Sum_probs=64.9

Q ss_pred             cchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhh
Q 014171          265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL  340 (429)
Q Consensus       265 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~  340 (429)
                      ++++++..++++|..+|.|++|.|+.+|+..++.. .|  ++.+++.+++..+|.+++|.|+|+||+.++......
T Consensus         4 ls~~~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~-~~--~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~~~   76 (96)
T smart00027        4 ISPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLK-SG--LPQTLLAKIWNLADIDNDGELDKDEFALAMHLIYRK   76 (96)
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH-cC--CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHH
Confidence            56788899999999999999999999999999955 55  678899999999999999999999999887766543

Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=98.93  E-value=2.2e-09  Score=90.63  Aligned_cols=95  Identities=22%  Similarity=0.303  Sum_probs=74.0

Q ss_pred             cccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 014171           11 SANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR   90 (429)
Q Consensus        11 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~   90 (429)
                      ..|+.+++......+.+..-.+.+.|....++|||.+|-.|.+.+...         ...+++.|=.-+.-||..||+|+
T Consensus        46 t~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~G~~lkd~l~~~---------~~~~~r~vG~~vg~lH~~givHG  116 (204)
T COG3642          46 TRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIEGELLKDALEEA---------RPDLLREVGRLVGKLHKAGIVHG  116 (204)
T ss_pred             HHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeCChhHHHHHHhc---------chHHHHHHHHHHHHHHhcCeecC
Confidence            335555666566655666666777788888999999998888888443         14566677777888999999999


Q ss_pred             CCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           91 DMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        91 dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      ||.++||+++    ++.+.++|||++..
T Consensus       117 DLTtsNiIl~----~~~i~~IDfGLg~~  140 (204)
T COG3642         117 DLTTSNIILS----GGRIYFIDFGLGEF  140 (204)
T ss_pred             CCccceEEEe----CCcEEEEECCcccc
Confidence            9999999998    45699999999863

>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]

Probab=98.92  E-value=4.4e-09  Score=88.42  Aligned_cols=106  Identities=17%  Similarity=0.269  Sum_probs=80.0

Q ss_pred             cccccccccccCCCCCCcceeeccccceeEeeecCC-CChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecC
Q 014171           13 NCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEG-GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRD   91 (429)
Q Consensus        13 n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~g-g~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~d   91 (429)
                      ++.+.++.+...+.+..-...+.+....++|||.+| .++.+++...............++++|=+.+.-||.++|+|+|
T Consensus        59 ~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGD  138 (229)
T KOG3087|consen   59 QEARLLAKCRALGIPAPRLIFIDTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGD  138 (229)
T ss_pred             HHHHHHHHHHHhCCCCceEEEEecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeeccc
Confidence            344444444444444444444456777899999986 4888888777655555555588999999999999999999999


Q ss_pred             CCCCcEEEeecCCCCCEEEeeccccee
Q 014171           92 MKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        92 ikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      |..+||++.+.+....+.|+|||++..
T Consensus       139 LTTSNill~~~~~~~~~~lIdfgls~~  165 (229)
T KOG3087|consen  139 LTTSNILLRSDGNQITPILIDFGLSSV  165 (229)
T ss_pred             ccccceEEecCCCcCceEEEeecchhc
Confidence            999999999866666679999998753

>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z

Probab=98.91  E-value=2.9e-09  Score=81.47  Aligned_cols=62  Identities=18%  Similarity=0.299  Sum_probs=53.3

Q ss_pred             HHHHHHHhcccc-CCCCC-ccCHHHHHhhhcCC------C-----CHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          349 HLRSQAAFEKFD-IDRDG-FITPEELRMHTGLK------G-----SIDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       349 ~~~l~~~F~~~D-~~~~G-~I~~~el~~~~~~~------~-----~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      ...++.+|..|| +|++| +|+.+||+.++...      +     ++++++.++|.|+||.|+|+||+.+|.+.-
T Consensus         9 ~~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l~   83 (93)
T cd05026           9 MDTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAALT   83 (93)
T ss_pred             HHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Confidence            346788999999 78998 59999999999541      1     389999999999999999999999998754

S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac

>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z

Probab=98.88  E-value=5e-09  Score=80.20  Aligned_cols=70  Identities=24%  Similarity=0.369  Sum_probs=58.5

Q ss_pred             HHHhhhhccccccC-CCCCC-cccHHHHHHHHHhhC----CCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhh
Q 014171          268 EELADLRDQFDAID-VDKNG-SISLEEMRQALAKDL----PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV  337 (429)
Q Consensus       268 ~~~~~l~~~F~~~D-~~~~G-~i~~~el~~~l~~~~----~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~  337 (429)
                      .-+..+.++|+.+| .|++| +|+.+||..++...+    +...++.+++++++.+|.|++|.|+|+||+.++..+
T Consensus         7 ~a~~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l   82 (93)
T cd05026           7 GAMDTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAAL   82 (93)
T ss_pred             HHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence            34567888999999 78998 599999999996643    334477899999999999999999999999877554

S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac

>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif

Probab=98.87  E-value=4.1e-09  Score=80.09  Aligned_cols=71  Identities=27%  Similarity=0.465  Sum_probs=61.2

Q ss_pred             hHHHhhhhccccccCC--CCCCcccHHHHHHHHHhhCCCCc----cHHHHHHHHHHhcCCCCCcccHHHHHHHHhhh
Q 014171          267 DEELADLRDQFDAIDV--DKNGSISLEEMRQALAKDLPWKL----KESRVLEILQAIDCNTDGLVDFSEFVAATLHV  337 (429)
Q Consensus       267 ~~~~~~l~~~F~~~D~--~~~G~i~~~el~~~l~~~~~~~~----~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~  337 (429)
                      +++++.++++|..+|.  |++|+|+.+||..++...+|..+    +..++..++..+|.+++|.|+|++|+.++...
T Consensus         4 ~~~~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~   80 (88)
T cd00213           4 EKAIETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKL   80 (88)
T ss_pred             HHHHHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHH
Confidence            5677889999999999  89999999999999965455443    58999999999999999999999999876543

Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th

>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11

Probab=98.82  E-value=5.9e-09  Score=78.77  Aligned_cols=62  Identities=23%  Similarity=0.392  Sum_probs=53.7

Q ss_pred             HHHHHHHhcc-ccCCCCC-ccCHHHHHhhhcCC-----------CCHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          349 HLRSQAAFEK-FDIDRDG-FITPEELRMHTGLK-----------GSIDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       349 ~~~l~~~F~~-~D~~~~G-~I~~~el~~~~~~~-----------~~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      ...+..+|+. +|++++| +|+.+||+.++...           .+++++++.+|.|+||.|+|+||+.+|...-
T Consensus         8 i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l~   82 (89)
T cd05023           8 IESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGLA   82 (89)
T ss_pred             HHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHH
Confidence            4568899999 7888986 99999999998765           1389999999999999999999999998654

S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S

>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10

Probab=98.82  E-value=8e-09  Score=79.44  Aligned_cols=69  Identities=26%  Similarity=0.394  Sum_probs=59.6

Q ss_pred             HhhhhccccccCC-CC-CCcccHHHHHHHHHhh----CCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhh
Q 014171          270 LADLRDQFDAIDV-DK-NGSISLEEMRQALAKD----LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVH  338 (429)
Q Consensus       270 ~~~l~~~F~~~D~-~~-~G~i~~~el~~~l~~~----~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~  338 (429)
                      ...++++|..+|. |+ +|+|+.+||..+|...    +|..++..+++.+++.+|.+++|.|+|+||+.++....
T Consensus         7 ~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~~   81 (94)
T cd05031           7 MESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGLS   81 (94)
T ss_pred             HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence            4678899999997 97 6999999999999542    46678899999999999999999999999998776543

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1

Probab=98.81  E-value=1.1e-08  Score=78.37  Aligned_cols=68  Identities=28%  Similarity=0.418  Sum_probs=58.2

Q ss_pred             HhhhhccccccC-CCCCCc-ccHHHHHHHHHhhCC----CCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhh
Q 014171          270 LADLRDQFDAID-VDKNGS-ISLEEMRQALAKDLP----WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV  337 (429)
Q Consensus       270 ~~~l~~~F~~~D-~~~~G~-i~~~el~~~l~~~~~----~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~  337 (429)
                      +..++++|+.+| .+++|+ |+..||..+|...+|    ..++..+++.+++.+|.|++|.|+|+||+.++..+
T Consensus         8 ~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~   81 (92)
T cd05025           8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAAL   81 (92)
T ss_pred             HHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence            366899999997 999995 999999999964344    45688999999999999999999999999876544

S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.

>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10

Probab=98.81  E-value=8.3e-09  Score=79.37  Aligned_cols=63  Identities=21%  Similarity=0.376  Sum_probs=54.2

Q ss_pred             HHHHHHHhccccC-CC-CCccCHHHHHhhhcC-----CC------CHHHHHHHhCCCCCCcccHHHHHHHHHhccc
Q 014171          349 HLRSQAAFEKFDI-DR-DGFITPEELRMHTGL-----KG------SIDPLLEEADIDKDGRISLSEFRRLLRTASI  411 (429)
Q Consensus       349 ~~~l~~~F~~~D~-~~-~G~I~~~el~~~~~~-----~~------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~  411 (429)
                      ...++.+|..||. |+ +|+|+.+||+.++..     .+      +++.++..+|.|++|.|+|+||+.++.+.++
T Consensus         7 ~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~~~   82 (94)
T cd05031           7 MESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGLSI   82 (94)
T ss_pred             HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHH
Confidence            3568889999997 97 799999999998864     22      3889999999999999999999999987664

S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.

>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6

Probab=98.80  E-value=1.4e-08  Score=76.68  Aligned_cols=62  Identities=24%  Similarity=0.327  Sum_probs=54.0

Q ss_pred             HHHHHHHhccccC-CC-CCccCHHHHHhhhcC---CCC------HHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          349 HLRSQAAFEKFDI-DR-DGFITPEELRMHTGL---KGS------IDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       349 ~~~l~~~F~~~D~-~~-~G~I~~~el~~~~~~---~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      ...+..+|..||. |+ +|+|+.+||+.+++.   +|+      ++++++.+|.|++|.|+|+||+.+|.+.-
T Consensus         9 ~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l~   81 (88)
T cd05029           9 IGLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGALA   81 (88)
T ss_pred             HHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHH
Confidence            3567889999998 77 899999999999962   453      89999999999999999999999998754

S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact

>PTZ00184 calmodulin; Provisional

Probab=98.80  E-value=3.2e-08  Score=83.11  Aligned_cols=100  Identities=21%  Similarity=0.327  Sum_probs=80.1

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHH
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR  351 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~  351 (429)
                      .+..+|..+|.+++|.|+.+||..++............+..+|..+|.+++|.|+.+||..++.......   .   ...
T Consensus        48 ~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~~---~---~~~  121 (149)
T PTZ00184         48 ELQDMINEVDADGNGTIDFPEFLTLMARKMKDTDSEEEIKEAFKVFDRDGNGFISAAELRHVMTNLGEKL---T---DEE  121 (149)
T ss_pred             HHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCcHHHHHHHHHHhhCCCCCCeEeHHHHHHHHHHHCCCC---C---HHH
Confidence            5677799999999999999999999865444445567889999999999999999999988765432111   1   234


Q ss_pred             HHHHhccccCCCCCccCHHHHHhhhc
Q 014171          352 SQAAFEKFDIDRDGFITPEELRMHTG  377 (429)
Q Consensus       352 l~~~F~~~D~~~~G~I~~~el~~~~~  377 (429)
                      +..+|+.+|.+++|.|+.+||..++.
T Consensus       122 ~~~~~~~~d~~~~g~i~~~ef~~~~~  147 (149)
T PTZ00184        122 VDEMIREADVDGDGQINYEEFVKMMM  147 (149)
T ss_pred             HHHHHHhcCCCCCCcCcHHHHHHHHh
Confidence            67789999999999999999987764

>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1

Probab=98.79  E-value=1e-08  Score=78.51  Aligned_cols=62  Identities=19%  Similarity=0.340  Sum_probs=53.8

Q ss_pred             HHHHHHHhcccc-CCCCCc-cCHHHHHhhhcC-CC----------CHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          349 HLRSQAAFEKFD-IDRDGF-ITPEELRMHTGL-KG----------SIDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       349 ~~~l~~~F~~~D-~~~~G~-I~~~el~~~~~~-~~----------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      .+.++++|+.|| ++++|+ |+.+||+.+++. .|          +++.++..+|.|++|.|+|+||+.++....
T Consensus         8 ~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~~   82 (92)
T cd05025           8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALT   82 (92)
T ss_pred             HHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHH
Confidence            356889999997 999995 999999999964 22          388999999999999999999999997654

S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.

>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction

Probab=98.77  E-value=2e-08  Score=71.94  Aligned_cols=61  Identities=31%  Similarity=0.384  Sum_probs=54.0

Q ss_pred             hccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhh
Q 014171          274 RDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV  337 (429)
Q Consensus       274 ~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~  337 (429)
                      +++|..+|.|++|.|+.+|+..++.. .|.  +.++++.++..+|.+++|.|+|+||+..+..+
T Consensus         2 ~~~F~~~D~~~~G~i~~~el~~~l~~-~g~--~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~   62 (67)
T cd00052           2 DQIFRSLDPDGDGLISGDEARPFLGK-SGL--PRSVLAQIWDLADTDKDGKLDKEEFAIAMHLI   62 (67)
T ss_pred             hHHHHHhCCCCCCcCcHHHHHHHHHH-cCC--CHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence            46799999999999999999999965 564  78899999999999999999999999877544

The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=98.75  E-value=1.3e-07  Score=89.11  Aligned_cols=153  Identities=20%  Similarity=0.274  Sum_probs=111.4

Q ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCccccccccc
Q 014171           62 RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK  141 (429)
Q Consensus        62 ~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~  141 (429)
                      ...+..+.+.++.++.|...||..|.+-+|++++|+|++   +++.+.|+|-..-.....+......+|.+.|.+||..+
T Consensus       113 ~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVs---d~~~V~LVdsDsfqi~~ng~~~~cpVg~~eftPPElQ~  189 (637)
T COG4248         113 HCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVS---DDSKVVLVDSDSFQINANGTLHLCPVGVSEFTPPELQT  189 (637)
T ss_pred             ccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeee---cCceEEEEcccceeeccCCceEecccCccccCCHHHhc
Confidence            367889999999999999999999999999999999999   57889998854332223344455668899999999875


Q ss_pred             -CC-----CCCCcchHHHHHHHHHHhhC-CCCCCCCCh----hHHHH-HHHhcCCC------------CCCCCCCCCCHH
Q 014171          142 -RK-----SGPESDVWSIGVITYILLCG-RRPFWDKTE----DGIFK-EVLRNKPD------------FRRKPWPSISNS  197 (429)
Q Consensus       142 -~~-----~~~~~DiwslG~il~~l~~g-~~pf~~~~~----~~~~~-~i~~~~~~------------~~~~~~~~~~~~  197 (429)
                       +.     .+...|.|.+||++++++.| ++||.|...    ..-.+ .|..+.+.            ....+|.-++++
T Consensus       190 ~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya~~~~~g~~p~P~~~P~~~Lpp~  269 (637)
T COG4248         190 LPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYASDQRRGLKPPPRSIPLSMLPPD  269 (637)
T ss_pred             cccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeechhccCCCCCCCCCCChhhcCHH
Confidence             22     25678999999999999886 999965321    11111 22222111            111234567899


Q ss_pred             HHHHHHHhccCC--ccCcCCHH
Q 014171          198 AKDFVKKLLVKD--PRARLTAA  217 (429)
Q Consensus       198 ~~~li~~~l~~d--p~~R~s~~  217 (429)
                      +..|..+|+...  +.-|||++
T Consensus       270 vqAlF~qaF~~~~~~~~RP~a~  291 (637)
T COG4248         270 VQALFQQAFTESGVATPRPTAK  291 (637)
T ss_pred             HHHHHHHHhcccCCCCCCCCHH
Confidence            999999999653  45899875

>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11

Probab=98.75  E-value=2.3e-08  Score=75.52  Aligned_cols=70  Identities=20%  Similarity=0.307  Sum_probs=58.7

Q ss_pred             HHHhhhhccccc-cCCCCCC-cccHHHHHHHHHhhC----CCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhh
Q 014171          268 EELADLRDQFDA-IDVDKNG-SISLEEMRQALAKDL----PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV  337 (429)
Q Consensus       268 ~~~~~l~~~F~~-~D~~~~G-~i~~~el~~~l~~~~----~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~  337 (429)
                      ..+..|..+|+. +|.+++| +|+.+||+.++...+    +...+..+++++++.+|.|+||.|+|+||+..+..+
T Consensus         6 ~~i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l   81 (89)
T cd05023           6 RCIESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGL   81 (89)
T ss_pred             HHHHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence            446778899999 7888876 999999999997754    334457899999999999999999999999876544

S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S

>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A

Probab=98.75  E-value=2.9e-08  Score=67.73  Aligned_cols=51  Identities=37%  Similarity=0.629  Sum_probs=47.2

Q ss_pred             CCCcccHHHHHHHHHhhCCCC-ccHHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q 014171          284 KNGSISLEEMRQALAKDLPWK-LKESRVLEILQAIDCNTDGLVDFSEFVAATL  335 (429)
Q Consensus       284 ~~G~i~~~el~~~l~~~~~~~-~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~  335 (429)
                      .+|+|+.+||..+| ..+|.. +++.++..+|..+|.|++|.|+|+||+.++.
T Consensus         1 ~~G~i~~~~~~~~l-~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~   52 (54)
T PF13833_consen    1 KDGKITREEFRRAL-SKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQ   52 (54)
T ss_dssp             SSSEEEHHHHHHHH-HHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHH
T ss_pred             CcCEECHHHHHHHH-HHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHH
Confidence            37999999999999 668999 9999999999999999999999999998764

...

>KOG0028 consensus Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein [Cytoskeleton; Cell cycle control, cell division, chromosome partitioning]

Probab=98.74  E-value=4.3e-08  Score=79.45  Aligned_cols=102  Identities=15%  Similarity=0.212  Sum_probs=84.6

Q ss_pred             hhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHH
Q 014171          271 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL  350 (429)
Q Consensus       271 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~  350 (429)
                      +++.++-.-+|.++.|.|+.++|...++..+|...+.+++...|+.+|.|++|.||+.+|+.++..+.....      .+
T Consensus        69 ~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~dt~eEi~~afrl~D~D~~Gkis~~~lkrvakeLgenlt------D~  142 (172)
T KOG0028|consen   69 EEILKLLADVDKEGSGKITFEDFRRVMTVKLGERDTKEEIKKAFRLFDDDKTGKISQRNLKRVAKELGENLT------DE  142 (172)
T ss_pred             HHHHHHHHhhhhccCceechHHHHHHHHHHHhccCcHHHHHHHHHcccccCCCCcCHHHHHHHHHHhCcccc------HH
Confidence            344555667899999999999999999888998889999999999999999999999999987754433222      23


Q ss_pred             HHHHHhccccCCCCCccCHHHHHhhhcC
Q 014171          351 RSQAAFEKFDIDRDGFITPEELRMHTGL  378 (429)
Q Consensus       351 ~l~~~F~~~D~~~~G~I~~~el~~~~~~  378 (429)
                      .+++...-+|.|++|-|+.+||.++++.
T Consensus       143 El~eMIeEAd~d~dgevneeEF~~imk~  170 (172)
T KOG0028|consen  143 ELMEMIEEADRDGDGEVNEEEFIRIMKK  170 (172)
T ss_pred             HHHHHHHHhcccccccccHHHHHHHHhc
Confidence            5777888899999999999999888764

>KOG2643 consensus Ca2+ binding protein, contains EF-hand motifs [Inorganic ion transport and metabolism]

Probab=98.74  E-value=1.5e-08  Score=94.88  Aligned_cols=96  Identities=21%  Similarity=0.277  Sum_probs=65.0

Q ss_pred             hhhhccccccCCCCCCcccHHHHHHHHHh-----hCCC--------Ccc-HHHHHH--HHHHhcCCCCCcccHHHHHHHH
Q 014171          271 ADLRDQFDAIDVDKNGSISLEEMRQALAK-----DLPW--------KLK-ESRVLE--ILQAIDCNTDGLVDFSEFVAAT  334 (429)
Q Consensus       271 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~-----~~~~--------~~~-~~~~~~--l~~~~d~~~~g~I~~~eF~~~~  334 (429)
                      ...+-+|+.||.||||.|+.+||....+-     .+|.        ..+ ..++..  +..-|..+++|+++++||...+
T Consensus       233 ~~F~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~nsaL~~yFFG~rg~~kLs~deF~~F~  312 (489)
T KOG2643|consen  233 RNFRIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVNSALLTYFFGKRGNGKLSIDEFLKFQ  312 (489)
T ss_pred             ccceeeeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhhhhHHHHhhccCCCccccHHHHHHHH
Confidence            34677899999999999999999887621     1222        001 112222  2223678999999999998765


Q ss_pred             hhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhh
Q 014171          335 LHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHT  376 (429)
Q Consensus       335 ~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~  376 (429)
                      ..+   +.       +.+..-|..+|+..+|.|+..+|.+++
T Consensus       313 e~L---q~-------Eil~lEF~~~~~~~~g~Ise~DFA~~l  344 (489)
T KOG2643|consen  313 ENL---QE-------EILELEFERFDKGDSGAISEVDFAELL  344 (489)
T ss_pred             HHH---HH-------HHHHHHHHHhCcccccccCHHHHHHHH
Confidence            432   21       234556888888888999888887543

>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP)

Probab=98.74  E-value=2.5e-08  Score=78.93  Aligned_cols=60  Identities=30%  Similarity=0.356  Sum_probs=51.4

Q ss_pred             HHHHHHHhccccCCCCCccCHHHHHhhhcCC--CCHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          349 HLRSQAAFEKFDIDRDGFITPEELRMHTGLK--GSIDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       349 ~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~--~~~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                      ...+.-+|..+|+|+||+|+.+||..+....  ..+..+|..+|.|+||.||++||+..+.+
T Consensus        47 ~~~l~w~F~~lD~d~DG~Ls~~EL~~~~l~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl~~  108 (116)
T cd00252          47 KDPVGWMFNQLDGNYDGKLSHHELAPIRLDPNEHCIKPFFESCDLDKDGSISLDEWCYCFIK  108 (116)
T ss_pred             HHHHHHHHHHHCCCCCCcCCHHHHHHHHccchHHHHHHHHHHHCCCCCCCCCHHHHHHHHhC
Confidence            4567889999999999999999999886222  12788999999999999999999999843

SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.

>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction

Probab=98.74  E-value=2e-08  Score=71.92  Aligned_cols=57  Identities=32%  Similarity=0.523  Sum_probs=51.1

Q ss_pred             HHHhccccCCCCCccCHHHHHhhhcCCCC----HHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          353 QAAFEKFDIDRDGFITPEELRMHTGLKGS----IDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       353 ~~~F~~~D~~~~G~I~~~el~~~~~~~~~----~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                      +.+|+.+|+|++|.|+.+|++.++...|.    +..++..+|.+++|.|+|+||+.++...
T Consensus         2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~   62 (67)
T cd00052           2 DQIFRSLDPDGDGLISGDEARPFLGKSGLPRSVLAQIWDLADTDKDGKLDKEEFAIAMHLI   62 (67)
T ss_pred             hHHHHHhCCCCCCcCcHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence            35899999999999999999999877763    7889999999999999999999988654

The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.

>KOG1243 consensus Protein kinase [General function prediction only]

Probab=98.73  E-value=8.1e-08  Score=95.52  Aligned_cols=137  Identities=13%  Similarity=0.112  Sum_probs=93.0

Q ss_pred             cccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCCee
Q 014171           11 SANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH-LHGLVH   89 (429)
Q Consensus        11 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH-~~~i~H   89 (429)
                      +...++|++|+.+.......-      ..|+|+|-+.  .|..++.+.     +...+...+.||+.||.+|| +++++|
T Consensus        62 ~lKtlRHP~Il~yL~t~e~~~------~~ylvTErV~--Pl~~~lk~l-----~~~~v~~Gl~qIl~AL~FL~~d~~lvH  128 (690)
T KOG1243|consen   62 RLKTLRHPNILSYLDTTEEEG------TLYLVTERVR--PLETVLKEL-----GKEEVCLGLFQILAALSFLNDDCNLVH  128 (690)
T ss_pred             HhhhccCchhhhhhhhhcccC------ceEEEeeccc--cHHHHHHHh-----HHHHHHHHHHHHHHHHHHHhccCCeee
Confidence            334444555555443333333      3457899995  677777443     47788889999999999998 678999


Q ss_pred             cCCCCCcEEEeecCCCCCEEEeecccceeccCCCc-ccccccCCcccccccccCCCCCCcchHHHHHHHHHHhhCC
Q 014171           90 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGR  164 (429)
Q Consensus        90 ~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~DiwslG~il~~l~~g~  164 (429)
                      ++|.-+.++++   ..|..||++|..+........ .....-.-.|..|+.+... .-..|.|-|||++++++.|.
T Consensus       129 gNv~~~SVfVn---~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~~s-~~s~D~~~Lg~li~el~ng~  200 (690)
T KOG1243|consen  129 GNVCKDSVFVN---ESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEIDPS-EWSIDSWGLGCLIEELFNGS  200 (690)
T ss_pred             ccEeeeeEEEc---CCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcCcc-ccchhhhhHHHHHHHHhCcc
Confidence            99999999999   689999999987755432221 1111112235555543211 13469999999999999993

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=98.71  E-value=6.1e-08  Score=89.27  Aligned_cols=80  Identities=16%  Similarity=0.175  Sum_probs=66.0

Q ss_pred             cceeEeeecCCC-ChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeec----CCCCCEEEee
Q 014171           38 RKLRRIRLCEGG-ELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA----KEDSSLKATD  112 (429)
Q Consensus        38 ~~~lv~e~~~gg-~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~----~~~~~~kL~D  112 (429)
                      ..++|||+++|- +|.+++........++.....++.+++..+.-||..||+|+|+++.|||++..    .....+.|+|
T Consensus       109 ~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LID  188 (268)
T PRK15123        109 TSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVID  188 (268)
T ss_pred             eeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEE
Confidence            478999999975 78888754323456777888999999999999999999999999999999841    2356799999


Q ss_pred             cccce
Q 014171          113 FGLSD  117 (429)
Q Consensus       113 fg~a~  117 (429)
                      |+.+.
T Consensus       189 l~r~~  193 (268)
T PRK15123        189 LHRAQ  193 (268)
T ss_pred             CCccc
Confidence            99775

>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif

Probab=98.70  E-value=2e-08  Score=76.31  Aligned_cols=62  Identities=19%  Similarity=0.365  Sum_probs=54.0

Q ss_pred             HHHHHHHhccccC--CCCCccCHHHHHhhhcC-C----------CCHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          349 HLRSQAAFEKFDI--DRDGFITPEELRMHTGL-K----------GSIDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       349 ~~~l~~~F~~~D~--~~~G~I~~~el~~~~~~-~----------~~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      ...++.+|..||+  |++|.|+.+||+.+++. .          .+++.++..+|.|++|.|+|+||+.++....
T Consensus         7 ~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~~   81 (88)
T cd00213           7 IETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKLA   81 (88)
T ss_pred             HHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHH
Confidence            4568899999999  89999999999999864 2          2388899999999999999999999998654

Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=98.70  E-value=3.8e-08  Score=97.44  Aligned_cols=76  Identities=18%  Similarity=0.342  Sum_probs=58.5

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHH-HHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR-VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~-aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ..++||||++|++|.+...... ...+   ...++.+++. .+..+|..|++|+|++|.||+++   .++.++|+|||++
T Consensus       232 ~~vLvmE~i~G~~L~~~~~~~~-~~~~---~~~ia~~~~~~~l~ql~~~g~~H~D~hPgNilv~---~~g~i~liDfG~~  304 (437)
T TIGR01982       232 ERVLTMEWIDGIPLSDIAALDE-AGLD---RKALAENLARSFLNQVLRDGFFHADLHPGNIFVL---KDGKIIALDFGIV  304 (437)
T ss_pred             CceEEEEeECCcccccHHHHHh-cCCC---HHHHHHHHHHHHHHHHHhCCceeCCCCcccEEEC---CCCcEEEEeCCCe
Confidence            3579999999999988764322 1222   2345556655 47889999999999999999998   4788999999998


Q ss_pred             eecc
Q 014171          117 DFIK  120 (429)
Q Consensus       117 ~~~~  120 (429)
                      ..++
T Consensus       305 ~~l~  308 (437)
T TIGR01982       305 GRLS  308 (437)
T ss_pred             eECC
Confidence            7653

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>smart00027 EH Eps15 homology domain

Probab=98.70  E-value=4.1e-08  Score=75.86  Aligned_cols=61  Identities=23%  Similarity=0.344  Sum_probs=54.9

Q ss_pred             HHHHHHhccccCCCCCccCHHHHHhhhcCCC----CHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          350 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       350 ~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~----~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      ..+..+|+.+|+|++|.|+.+|++.+++..+    ++.+++..+|.+++|.|+|+||+.++....
T Consensus        10 ~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~   74 (96)
T smart00027       10 AKYEQIFRSLDKNQDGTVTGAQAKPILLKSGLPQTLLAKIWNLADIDNDGELDKDEFALAMHLIY   74 (96)
T ss_pred             HHHHHHHHHhCCCCCCeEeHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHH
Confidence            4688999999999999999999999997766    388999999999999999999999887554

Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.65  E-value=4.4e-08  Score=81.96  Aligned_cols=69  Identities=22%  Similarity=0.343  Sum_probs=58.5

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCCCcEEEeecCCCCCEEEeecc
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH---GLVHRDMKPENFLFKSAKEDSSLKATDFG  114 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kL~Dfg  114 (429)
                      ..|+++||+.|+.+..+         +......++.+++.+|.++|..   +++|+|++|.||+++   ..+.++++|||
T Consensus        67 ~~~~v~e~~~g~~~~~~---------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~---~~~~~~l~Df~  134 (155)
T cd05120          67 WSYLLMEWIEGETLDEV---------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVD---DGKILGIIDWE  134 (155)
T ss_pred             ccEEEEEecCCeecccC---------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEE---CCcEEEEEecc
Confidence            46899999999877543         5566677899999999999984   799999999999998   36789999999


Q ss_pred             ccee
Q 014171          115 LSDF  118 (429)
Q Consensus       115 ~a~~  118 (429)
                      .+..
T Consensus       135 ~~~~  138 (155)
T cd05120         135 YAGY  138 (155)
T ss_pred             cccC
Confidence            8753

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0034 consensus Ca2+/calmodulin-dependent protein phosphatase (calcineurin subunit B), EF-Hand superfamily protein [Signal transduction mechanisms]

Probab=98.65  E-value=1.6e-07  Score=80.68  Aligned_cols=111  Identities=22%  Similarity=0.243  Sum_probs=88.1

Q ss_pred             hccccccCCCCCCc-ccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhccc-ccHHHHHH
Q 014171          274 RDQFDAIDVDKNGS-ISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH-DSEKWHLR  351 (429)
Q Consensus       274 ~~~F~~~D~~~~G~-i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~-~~~~~~~~  351 (429)
                      ..+++.+|.+++|. |+.++|...+.-..+....+..++-.|+.+|.+++|.|+.+|+..++......... ..+.....
T Consensus        69 ~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i  148 (187)
T KOG0034|consen   69 DRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKASKREKLRFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDI  148 (187)
T ss_pred             HHHHHHHhccCCCCccCHHHHHHHHhhhcCCccHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHH
Confidence            45678888888888 99999999997666666556688899999999999999999999988766553222 12333456


Q ss_pred             HHHHhccccCCCCCccCHHHHHhhhcCCCCHHH
Q 014171          352 SQAAFEKFDIDRDGFITPEELRMHTGLKGSIDP  384 (429)
Q Consensus       352 l~~~F~~~D~~~~G~I~~~el~~~~~~~~~~~~  384 (429)
                      +...|..+|.|+||.|+.+|+.+++.....+.+
T Consensus       149 ~d~t~~e~D~d~DG~IsfeEf~~~v~~~P~~~~  181 (187)
T KOG0034|consen  149 VDKTFEEADTDGDGKISFEEFCKVVEKQPDLLE  181 (187)
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHcCccHHH
Confidence            789999999999999999999998876644443

>PF14658 EF-hand_9: EF-hand domain

Probab=98.61  E-value=1.3e-07  Score=65.65  Aligned_cols=60  Identities=25%  Similarity=0.471  Sum_probs=55.0

Q ss_pred             ccccccCCCCCCcccHHHHHHHHHhhCCC-CccHHHHHHHHHHhcCCCC-CcccHHHHHHHHh
Q 014171          275 DQFDAIDVDKNGSISLEEMRQALAKDLPW-KLKESRVLEILQAIDCNTD-GLVDFSEFVAATL  335 (429)
Q Consensus       275 ~~F~~~D~~~~G~i~~~el~~~l~~~~~~-~~~~~~~~~l~~~~d~~~~-g~I~~~eF~~~~~  335 (429)
                      ..|+.+|.++.|.|...++...| ++++. .+++.+++.+.+.+|+++. |.|+|+.|+.+|.
T Consensus         2 ~~F~~fD~~~tG~V~v~~l~~~L-ra~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~   63 (66)
T PF14658_consen    2 TAFDAFDTQKTGRVPVSDLITYL-RAVTGRSPEESELQDLINELDPEGRDGSVNFDTFLAIMR   63 (66)
T ss_pred             cchhhcCCcCCceEeHHHHHHHH-HHHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHH
Confidence            36999999999999999999999 55776 9999999999999999987 9999999998875

>PLN02964 phosphatidylserine decarboxylase

Probab=98.60  E-value=1.6e-07  Score=95.09  Aligned_cols=124  Identities=16%  Similarity=0.226  Sum_probs=86.2

Q ss_pred             cccccCCCCCCcccHHHHHHHHHhhCCCCcc---HHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHH
Q 014171          276 QFDAIDVDKNGSISLEEMRQALAKDLPWKLK---ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS  352 (429)
Q Consensus       276 ~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~---~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l  352 (429)
                      .|..+|++   .++.+++.... ..--..++   .+++.+.|..+|.|++|.+ +...+..+    .. ....+.....+
T Consensus       112 ~~~~~~~~---~~s~n~lv~~~-e~~~t~f~~kqi~elkeaF~lfD~dgdG~i-Lg~ilrsl----G~-~~pte~e~~fi  181 (644)
T PLN02964        112 RISVFETN---RLSKNTLVGYC-ELDLFDFVTQEPESACESFDLLDPSSSNKV-VGSIFVSC----SI-EDPVETERSFA  181 (644)
T ss_pred             EEEEEecC---CCCHHHhhhhe-eecHhhccHHHHHHHHHHHHHHCCCCCCcC-HHHHHHHh----CC-CCCCHHHHHHH
Confidence            57777865   55666655443 21001122   3567778899999999997 33333221    10 11111111237


Q ss_pred             HHHhccccCCCCCccCHHHHHhhhcCCC------CHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          353 QAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       353 ~~~F~~~D~~~~G~I~~~el~~~~~~~~------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                      ..+|+.+|.|++|.|+.+||..++..++      ++.++|+.+|.|++|.|+++||+.+|...
T Consensus       182 ~~mf~~~D~DgdG~IdfdEFl~lL~~lg~~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~~  244 (644)
T PLN02964        182 RRILAIVDYDEDGQLSFSEFSDLIKAFGNLVAANKKEELFKAADLNGDGVVTIDELAALLALQ  244 (644)
T ss_pred             HHHHHHhCCCCCCeEcHHHHHHHHHHhccCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhc
Confidence            8899999999999999999999887765      28889999999999999999999999874

>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]

Probab=98.57  E-value=3e-08  Score=97.41  Aligned_cols=175  Identities=18%  Similarity=0.176  Sum_probs=124.3

Q ss_pred             eeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccceec
Q 014171           40 LRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI  119 (429)
Q Consensus        40 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~  119 (429)
                      |+=.|||+||++...+...  ..+.+...+.+..|++.++.++|+..++|+|++|+||++...  ++..+++|||.+..+
T Consensus       342 ~ip~e~~~~~s~~l~~~~~--~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~--~~~~~~~~~~~~t~~  417 (524)
T KOG0601|consen  342 YIPLEFCEGGSSSLRSVTS--QMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISND--GFFSKLGDFGCWTRL  417 (524)
T ss_pred             cCchhhhcCcchhhhhHHH--HhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccc--hhhhhcccccccccc
Confidence            3557899999997776332  568889999999999999999999999999999999999842  277789999987653


Q ss_pred             cCCCcccccccCCccc-ccccccCC--CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCH
Q 014171          120 KPGKKFQDIVGSAYYV-APEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN  196 (429)
Q Consensus       120 ~~~~~~~~~~g~~~y~-aPE~~~~~--~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  196 (429)
                      ...  .......-++. .+|++...  ...++|++|+|+.+.+.++|...-+...   ....+..+....    .+....
T Consensus       418 ~~~--~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~~~---~~~~i~~~~~p~----~~~~~~  488 (524)
T KOG0601|consen  418 AFS--SGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSESGV---QSLTIRSGDTPN----LPGLKL  488 (524)
T ss_pred             cee--cccccccccccccchhhccccccccccccccccccccccccCcccCcccc---cceeeecccccC----CCchHH
Confidence            211  11112223333 35555433  3789999999999999999865432221   122233332211    133457


Q ss_pred             HHHHHHHHhccCCccCcCCHHHHhCCCcccc
Q 014171          197 SAKDFVKKLLVKDPRARLTAAQALSHPWVRE  227 (429)
Q Consensus       197 ~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~  227 (429)
                      ++..+...+...++..|+.+.++..|.=|-.
T Consensus       489 ~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~  519 (524)
T KOG0601|consen  489 QLQVLLKVMINPDRKRRPSAVELSLHSEFYR  519 (524)
T ss_pred             hhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence            7888999999999999999999888775543

>KOG4251 consensus Calcium binding protein [General function prediction only]

Probab=98.55  E-value=5.3e-08  Score=84.15  Aligned_cols=137  Identities=21%  Similarity=0.270  Sum_probs=93.3

Q ss_pred             HhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCc--cHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhccc----
Q 014171          270 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKL--KESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH----  343 (429)
Q Consensus       270 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~--~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~----  343 (429)
                      .+.+..+|.+.|.|.||+|+..|+++++.+.....+  +.++-+-.|...|+|+||.|+++||...+.....-...    
T Consensus       100 rrklmviFsKvDVNtDrkisAkEmqrwImektaEHfqeameeSkthFraVDpdgDGhvsWdEykvkFlaskghsekevad  179 (362)
T KOG4251|consen  100 RRKLMVIFSKVDVNTDRKISAKEMQRWIMEKTAEHFQEAMEESKTHFRAVDPDGDGHVSWDEYKVKFLASKGHSEKEVAD  179 (362)
T ss_pred             HHHHHHHHhhcccCccccccHHHHHHHHHHHHHHHHHHHHhhhhhheeeeCCCCCCceehhhhhhHHHhhcCcchHHHHH
Confidence            457889999999999999999999999865322221  22344557888999999999999997655442211110    


Q ss_pred             ------------ccHHHHHHHHHHhccccCC-CCCccCHHHHHhhhcCCCC-------HHHHHHHhCCCCCCcccHHHHH
Q 014171          344 ------------DSEKWHLRSQAAFEKFDID-RDGFITPEELRMHTGLKGS-------IDPLLEEADIDKDGRISLSEFR  403 (429)
Q Consensus       344 ------------~~~~~~~~l~~~F~~~D~~-~~G~I~~~el~~~~~~~~~-------~~~~~~~~d~~~dg~i~~~ef~  403 (429)
                                  +.....+.++..+-..|.- .+-.+|.+|+..++.....       +.+++...|.|+|..++..||+
T Consensus       180 airlneelkVDeEtqevlenlkdRwyqaDsppadlllteeEflsFLHPEhSrgmLrfmVkeivrdlDqdgDkqlSvpeFi  259 (362)
T KOG4251|consen  180 AIRLNEELKVDEETQEVLENLKDRWYQADSPPADLLLTEEEFLSFLHPEHSRGMLRFMVKEIVRDLDQDGDKQLSVPEFI  259 (362)
T ss_pred             HhhccCcccccHHHHHHHHhhhhhhccccCchhhhhhhHHHHHHHcChHhhhhhHHHHHHHHHHHhccCCCeeecchhhh
Confidence                        1111122233333333331 2445566999888876653       6788888999999999999999


Q ss_pred             HHH
Q 014171          404 RLL  406 (429)
Q Consensus       404 ~~~  406 (429)
                      .+.
T Consensus       260 slp  262 (362)
T KOG4251|consen  260 SLP  262 (362)
T ss_pred             cCC
Confidence            764

>KOG0040 consensus Ca2+-binding actin-bundling protein (spectrin), alpha chain (EF-Hand protein superfamily) [Cytoskeleton]

Probab=98.55  E-value=3.2e-07  Score=96.79  Aligned_cols=138  Identities=22%  Similarity=0.356  Sum_probs=109.0

Q ss_pred             cccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCcc-------HHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q 014171          263 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLK-------ESRVLEILQAIDCNTDGLVDFSEFVAATL  335 (429)
Q Consensus       263 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~-------~~~~~~l~~~~d~~~~g~I~~~eF~~~~~  335 (429)
                      ++++++++.+..-+|+.||.+.+|.++..+|..|| +++|++++       +.++++++..+|++.+|+|+..+|...|.
T Consensus      2245 ~GVtEe~L~EFs~~fkhFDkek~G~Ldhq~F~sCL-rslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi 2323 (2399)
T KOG0040|consen 2245 NGVTEEQLKEFSMMFKHFDKEKNGRLDHQHFKSCL-RSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMI 2323 (2399)
T ss_pred             CCCCHHHHHHHHHHHHHhchhhccCCcHHHHHHHH-HhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHH
Confidence            57899999999999999999999999999999999 56898762       23789999999999999999999998776


Q ss_pred             hhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC---CHHHHHHHhCC----CCCCcccHHHHHHHH
Q 014171          336 HVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG---SIDPLLEEADI----DKDGRISLSEFRRLL  406 (429)
Q Consensus       336 ~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~---~~~~~~~~~d~----~~dg~i~~~ef~~~~  406 (429)
                      ....-.-.    ....+..||+.+|. +.-||+.+++..-++...   .+.+|-..+|+    ...+.+.|.+|.+.+
T Consensus      2324 ~~ETeNI~----s~~eIE~AfraL~a-~~~yvtke~~~~~ltreqaefc~s~m~~~~e~~~~~s~q~~l~y~dfv~sl 2396 (2399)
T KOG0040|consen 2324 SKETENIL----SSEEIEDAFRALDA-GKPYVTKEELYQNLTREQAEFCMSKMKPYAETSSGRSDQVALDYKDFVNSL 2396 (2399)
T ss_pred             hccccccc----chHHHHHHHHHhhc-CCccccHHHHHhcCCHHHHHHHHHHhhhhcccccCCCccccccHHHHHHHH
Confidence            54221111    12368889999998 889999999987665543   14455555665    345679999998765

>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12

Probab=98.55  E-value=1.4e-07  Score=71.42  Aligned_cols=69  Identities=25%  Similarity=0.480  Sum_probs=58.9

Q ss_pred             HHHhhhhccccccCCC--CCCcccHHHHHHHHHhhCCCCcc----HHHHHHHHHHhcCCCCCcccHHHHHHHHhh
Q 014171          268 EELADLRDQFDAIDVD--KNGSISLEEMRQALAKDLPWKLK----ESRVLEILQAIDCNTDGLVDFSEFVAATLH  336 (429)
Q Consensus       268 ~~~~~l~~~F~~~D~~--~~G~i~~~el~~~l~~~~~~~~~----~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~  336 (429)
                      .-+..+...|..++..  .+|+|+.+||..+|...+|..++    +.+++.++..+|.+++|.|+|+||+..+..
T Consensus         5 ~~i~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~   79 (88)
T cd05030           5 KAIETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIK   79 (88)
T ss_pred             HHHHHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH
Confidence            3456788889999865  47999999999999766777676    899999999999999999999999987653

Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	429
3lij_A	494	Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820)		8e-61
3hzt_A	467	Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme4		3e-59
3igo_A	486	Crystal Structure Of Cryptosporidium Parvum Cdpk1,		4e-56
3q5i_A	504	Crystal Structure Of Pbanka_031420 Length = 504		1e-54
3i79_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		6e-54
3hx4_A	508	Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tg		6e-54
3ku2_A	507	Crystal Structure Of Inactivated Form Of Cdpk1 From		7e-54
3i7c_A	484	Calcium-Dependent Protein Kinase 1 From Toxoplasma		1e-51
4fg9_A	320	Crystal Structure Of Human Calcium/calmodulin-depen		2e-44
4fg8_A	315	Crystal Structure Of Human Calcium/calmodulin-depen		2e-44
1a06_A	332	Calmodulin-Dependent Protein Kinase From Rat Length		3e-44
2jc6_A	334	Crystal Structure Of Human Calmodulin-Dependent Pro		6e-44
4fg7_A	293	Crystal Structure Of Human Calcium/calmodulin-depen		9e-44
2w4o_A	349	Crystal Structure Of Human Camk4 In Complex With 4-		2e-43
2jam_A	304	Crystal Structure Of Human Calmodulin-Dependent Pro		2e-43
3dxn_A	287	Crystal Structure Of The Calcium-dependent Kinase F		3e-42
2wei_A	287	Crystal Structure Of The Kinase Domain Of Cryptospo		4e-42
3dfa_A	286	Crystal Structure Of Kinase Domain Of Calcium-depen		4e-42
2qg5_A	294	Cryptosporidium Parvum Calcium Dependent Protein Ki		2e-40
3f3z_A	277	Crystal Structure Of Cryptosporidium Parvum Calcium		2e-40
3ma6_A	298	Crystal Structure Of Kinase Domain Of Tgcdpk1 In Pr		3e-39
2wel_A	327	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		1e-36
2vn9_A	301	Crystal Structure Of Human Calcium Calmodulin Depen		3e-36
3soa_A	444	Full-Length Human Camkii Length = 444		3e-35
2vz6_A	313	Structure Of Human Calcium Calmodulin Dependent Pro		6e-35
3bhh_A	295	Crystal Structure Of Human Calcium/calmodulin-depen		1e-34
3fhr_A	336	High Resolution Crystal Structure Of Mitogen-Activa		1e-33
2v7o_A	336	Crystal Structure Of Human Calcium-Calmodulin-Depen		1e-33
3r1n_A	317	Mk3 Kinase Bound To Compound 5b Length = 317		1e-33
2bdw_A	362	Crystal Structure Of The Auto-Inhibited Kinase Doma		2e-33
3kl8_A	269	Camkiintide Inhibitor Complex Length = 269		3e-33
3kk8_A	284	Camkii Substrate Complex A Length = 284		3e-33
3kk9_A	282	Camkii Substrate Complex B Length = 282		3e-33
3bhy_A	283	Crystal Structure Of Human Death Associated Protein		3e-32
2ycf_A	322	Crystal Structure Of Checkpoint Kinase 2 In Complex		6e-32
2xk9_A	322	Structural Analysis Of Checkpoint Kinase 2 (Chk2) I		6e-32
2w0j_A	323	Crystal Structure Of Chk2 In Complex With Nsc 10955		6e-32
2cn5_A	329	Crystal Structure Of Human Chk2 In Complex With Adp		6e-32
2ycr_A	323	Crystal Structure Of Checkpoint Kinase 2 In Complex		7e-32
3i6w_A	443	Structure And Activation Mechanism Of The Chk2 Dna-		1e-31
1z9x_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		1e-31
2a27_A	321	Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal		1e-31
3i6u_A	419	Structure And Activation Mechanism Of The Chk2 Dna-		1e-31
2j90_A	304	Crystal Structure Of Human Zip Kinase In Complex Wi		1e-31
1yrp_A	278	Catalytic Domain Of Human Zip Kinase Phosphorylated		1e-31
3is5_A	285	Crystal Structure Of Cdpk Kinase Domain From Toxopl		2e-31
2a2a_A	321	High-resolution Crystallographic Analysis Of The Au		2e-31
1wmk_A	321	Human Death-Associated Kinase Drp-1, Mutant S308d D		2e-31
1zws_A	288	Crystal Structure Of The Catalytic Domain Of Human		2e-31
2w4k_A	302	X-Ray Structure Of A Dap-Kinase 2-302 Length = 302		3e-31
2ya9_A	361	Crystal Structure Of The Autoinhibited Form Of Mous		4e-31
3mfr_A	351	Cask-4m Cam Kinase Domain, Native Length = 351		6e-31
2yak_A	285	Structure Of Death-Associated Protein Kinase 1 (Dap		7e-31
1wvw_A	278	Crystal Structures Of Kinase Domain Of Dap Kinase I		8e-31
2xuu_A	334	Crystal Structure Of A Dap-Kinase 1 Mutant Length =		8e-31
2w4j_A	277	X-Ray Structure Of A Dap-Kinase 2-277 Length = 277		8e-31
2y0a_A	326	Structure Of Dapk1 Construct Residues 1-304 Length		8e-31
2x0g_A	334	X-ray Structure Of A Dap-kinase Calmodulin Complex		8e-31
1kob_A	387	Twitchin Kinase Fragment (Aplysia), Autoregulated P		9e-31
2xzs_A	312	Death Associated Protein Kinase 1 Residues 1-312 Le		9e-31
1p4f_A	293	Death Associated Protein Kinase Catalytic Domain Wi		1e-30
3f5u_A	295	Crystal Structure Of The Death Associated Protein K		1e-30
1ig1_A	294	1.8a X-Ray Structure Of Ternary Complex Of A Cataly		1e-30
3gu4_A	295	Crystal Structure Of Dapkq23v-Amppnp Length = 295		1e-30
3dfc_B	295	Crystal Structure Of A Glycine-Rich Loop Mutant Of		1e-30
2onl_C	406	Crystal Structure Of The P38a-Mapkap Kinase 2 Heter		1e-30
3zgw_A	347	Crystal Structure Of Maternal Embryonic Leucine Zip		1e-30
1kwp_A	400	Crystal Structure Of Mapkap2 Length = 400		2e-30
2oza_A	356	Structure Of P38alpha Complex Length = 356		2e-30
3gu8_A	295	Crystal Structure Of Dapkl93g With N6-Cyclopentylad		2e-30
1koa_A	491	Twitchin Kinase Fragment (C.Elegans), Autoregulated		2e-30
3uto_A	573	Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-		3e-30
3ka0_A	320	Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4		3e-30
2p3g_X	327	Crystal Structure Of A Pyrrolopyridine Inhibitor Bo		3e-30
3fpm_A	325	Crystal Structure Of A Squarate Inhibitor Bound To		4e-30
3r2b_A	318	Mk2 Kinase Bound To Compound 5b Length = 318		4e-30
2pzy_A	324	Structure Of Mk2 Complexed With Compound 76 Length		4e-30
2jbo_A	326	Protein Kinase Mk2 In Complex With An Inhibitor (Cr		4e-30
3r2y_A	319	Mk2 Kinase Bound To Compound 1 Length = 319		5e-30
3gok_A	334	Binding Site Mapping Of Protein Ligands Length = 33		5e-30
2y7j_A	365	Structure Of Human Phosphorylase Kinase, Gamma 2 Le		9e-30
2phk_A	277	The Crystal Structure Of A Phosphorylase Kinase Pep		1e-29
1phk_A	298	Two Structures Of The Catalytic Domain Of Phosphory		1e-29
1ql6_A	298	The Catalytic Mechanism Of Phosphorylase Kinase Pro		2e-29
2ac5_A	316	Structure Of Human Mnk2 Kinase Domain Mutant D228g		2e-29
1nxk_A	400	Crystal Structure Of Staurosporine Bound To Map Kap		3e-29
3c0g_A	351	Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Len		9e-29
3tac_A	361	Crystal Structure Of The Liprin-AlphaCASK COMPLEX L		9e-29
3h4j_B	336	Crystal Structure Of Pombe Ampk Kdaid Fragment Leng		9e-29
2ac3_A	316	Structure Of Human Mnk2 Kinase Domain Length = 316		2e-28
2hw6_A	307	Crystal Structure Of Mnk1 Catalytic Domain Length =		3e-28
2wnt_A	330	Crystal Structure Of The Human Ribosomal Protein S6		7e-28
3rny_A	346	Crystal Structure Of Human Rsk1 C-Terminal Kinase D		7e-28
2qr8_A	342	2.0a X-ray Structure Of C-terminal Kinase Domain Of		1e-27
2aao_A	166	Regulatory Apparatus Of Calcium Dependent Protein K		2e-27
3kn5_A	325	Crystal Structure Of The C-Terminal Kinase Domain O		7e-27
2qr7_A	342	2.0a X-Ray Structure Of C-Terminal Kinase Domain Of		1e-26
3lm0_A	327	Crystal Structure Of Human SerineTHREONINE KINASE 1		5e-26
2x4f_A	373	The Crystal Structure Of The Human Myosin Light Cha		6e-26
1tki_A	321	Autoinhibited Serine Kinase Domain Of The Giant Mus		2e-25
3dae_A	283	Crystal Structure Of Phosphorylated Snf1 Kinase Dom		2e-25
3mn3_A	271	An Inhibited Conformation For The Protein Kinase Do		2e-25
3hyh_A	275	Crystal Structure Of The Protein Kinase Domain Of Y		2e-25
2fh9_A	274	Structure And Dimerization Of The Kinase Domain Fro		2e-25
2wzj_A	327	Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82		4e-25
1zmv_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		7e-25
1zmu_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		7e-25
2r0i_A	327	Crystal Structure Of A Kinase Mark2PAR-1 Mutant Len		7e-25
2qnj_A	328	Kinase And Ubiquitin-Associated Domains Of Mark3PAR		9e-25
3kga_A	299	Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexe		1e-24
2yza_A	276	Crystal Structure Of Kinase Domain Of Human 5'-Amp-		2e-24
2y94_A	476	Structure Of An Active Form Of Mammalian Ampk Lengt		2e-24
1zmw_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		2e-24
3fe3_A	328	Crystal Structure Of The Kinase Mark3PAR-1: T211a-S		2e-24
3iec_A	319	Helicobacter Pylori Caga Inhibits Par1MARK FAMILY K		8e-24
2h6d_A	276	Protein Kinase Domain Of The Human 5'-Amp-Activated		9e-24
1y8g_A	327	Catalytic And Ubiqutin-Associated Domains Of Mark2P		3e-23
3hko_A	345	Crystal Structure Of A Cdpk Kinase Domain From Cryp		7e-23
3cok_A	278	Crystal Structure Of Plk4 Kinase Length = 278		2e-22
2x4z_A	296	Crystal Structure Of The Human P21-Activated Kinase		3e-22
2bva_A	292	Crystal Structure Of The Human P21-Activated Kinase		3e-22
2q0n_A	301	Structure Of Human P21 Activating Kinase 4 (Pak4) I		3e-22
2cdz_A	303	Crystal Structure Of The Human P21-Activated Kinase		3e-22
4fif_A	346	Catalytic Domain Of Human Pak4 With Rpkplvdp Peptid		3e-22
4fie_A	423	Full-Length Human Pak4 Length = 423		4e-22
2hak_A	328	Catalytic And Ubiqutin-Associated Domains Of Mark1P		5e-21
2bmc_A	306	Aurora-2 T287d T288d Complexed With Pha-680632 Leng		2e-20
2c6d_A	275	Aurora A Kinase Activated Mutant (T287d) In Complex		2e-20
2c6e_A	283	Aurora A Kinase Activated Mutant (T287d) In Complex		2e-20
3lau_A	287	Crystal Structure Of Aurora2 Kinase In Complex With		2e-20
3fdn_A	279	Structure-Based Drug Design Of Novel Aurora Kinase		2e-20
3r21_A	271	Design, Synthesis, And Biological Evaluation Of Pyr		2e-20
3ujg_A	361	Crystal Structure Of Snrk2.6 In Complex With Hab1 L		3e-20
2c30_A	321	Crystal Structure Of The Human P21-Activated Kinase		3e-20
3uc4_A	362	The Crystal Structure Of Snf1-Related Kinase 2.6 Le		3e-20
3d14_A	272	Crystal Structure Of Mouse Aurora A (Asn186->gly, L		4e-20
3zuu_A	362	The Structure Of Ost1 (D160a, S175d) Kinase In Comp		4e-20
3nax_A	311	Pdk1 In Complex With Inhibitor Mp7 Length = 311		4e-20
3daj_A	272	Crystal Structure Of Aurora A Complexed With An Inh		4e-20
2r7b_A	312	Crystal Structure Of The Phosphoinositide-Dependent		5e-20
2xck_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		5e-20
3nay_A	311	Pdk1 In Complex With Inhibitor Mp6 Length = 311		5e-20
1uu3_A	310	Structure Of Human Pdk1 Kinase Domain In Complex Wi		5e-20
2xch_A	309	Crystal Structure Of Pdk1 In Complex With A Pyrazol		5e-20
4a07_A	311	Human Pdk1 Kinase Domain In Complex With Allosteric		5e-20
3rwp_A	311	Discovery Of A Novel, Potent And Selective Inhibito		5e-20
3sc1_A	311	Novel Isoquinolone Pdk1 Inhibitors Discovered Throu		6e-20
2biy_A	310	Structure Of Pdk1-S241a Mutant Kinase Domain Length		6e-20
3iop_A	312	Pdk-1 In Complex With The Inhibitor Compound-8i Len		6e-20
3h9o_A	311	Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1)		6e-20
2xru_A	280	Aurora-A T288e Complexed With Pha-828300 Length = 2		6e-20
3nun_A	292	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lea		6e-20
3orx_A	316	Pdk1 Mutant Bound To Allosteric Disulfide Fragment		7e-20
3hrc_A	311	Crystal Structure Of A Mutant Of Human Pdk1 Kinase		7e-20
2e9v_A	268	Structure Of H-Chk1 Complexed With A859017 Length =		8e-20
2ayp_A	269	Crystal Structure Of Chk1 With An Indol Inhibitor L		8e-20
2f57_A	317	Crystal Structure Of The Human P21-activated Kinase		8e-20
2ghg_A	269	H-Chk1 Complexed With A431994 Length = 269		8e-20
1zys_A	273	Co-Crystal Structure Of Checkpoint Kinase Chk1 With		8e-20
1z5m_A	286	Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrr		9e-20
4fsu_A	279	Crystal Structure Of The Chk1 Length = 279		9e-20
3nus_A	286	Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fra		9e-20
2j4z_A	306	Structure Of Aurora-2 In Complex With Pha-680626 Le		9e-20
1h1w_A	289	High Resolution Crystal Structure Of The Human Pdk1		9e-20
4fsy_A	279	Crystal Structure Of The Chk1 Length = 279		9e-20
4fsn_A	278	Crystal Structure Of The Chk1 Length = 278		1e-19
3jvr_A	271	Characterization Of The Chk1 Allosteric Inhibitor B		1e-19
4fsm_A	279	Crystal Structure Of The Chk1 Length = 279		1e-19
2x8e_A	276	Discovery Of A Novel Class Of Triazolones As Checkp		1e-19
2r0u_A	323	Crystal Structure Of Chek1 In Complex With Inhibito		1e-19
1muo_A	297	Crystal Structure Of Aurora-2, An Oncogenic Serine-		1e-19
1uu9_A	286	Structure Of Human Pdk1 Kinase Domain In Complex Wi		1e-19
3ot3_A	273	X-Ray Crystal Structure Of Compound 22k Bound To Hu		1e-19
2hog_A	322	Crystal Structure Of Chek1 In Complex With Inhibito		1e-19
4fst_A	269	Crystal Structure Of The Chk1 Length = 269		1e-19
2br1_A	297	Structure-Based Design Of Novel Chk1 Inhibitors: In		1e-19
1ia8_A	289	The 1.7 A Crystal Structure Of Human Cell Cycle Che		1e-19
1zlt_A	295	Crystal Structure Of Chk1 Complexed With A Hymenald		1e-19
4fsz_A	279	Crystal Structure Of The Chk1 Length = 279		1e-19
2xng_A	283	Structure Of Aurora-A Bound To A Selective Imidazop		1e-19
2x6d_A	285	Aurora-A Bound To An Inhibitor Length = 285		1e-19
2ydj_A	276	Discovery Of Checkpoint Kinase Inhibitor Azd7762 By		1e-19
2j50_A	280	Structure Of Aurora-2 In Complex With Pha-739358 Le		1e-19
4fsw_A	279	Crystal Structure Of The Chk1 Length = 279		1e-19
1mq4_A	272	Crystal Structure Of Aurora-A Protein Kinase Length		1e-19
2wqe_A	262	Structure Of S155r Aurora-A Somatic Mutant Length =		1e-19
2wtw_A	285	Aurora-A Inhibitor Structure (2nd Crystal Form) Len		1e-19
4ft3_A	279	Crystal Structure Of The Chk1 Length = 279		1e-19
3o50_A	267	Crystal Structure Of Benzamide 9 Bound To Auroraa L		1e-19
1ol5_A	282	Structure Of Aurora-A 122-403, Phosphorylated On Th		1e-19
3coh_A	268	Crystal Structure Of Aurora-A In Complex With A Pen		1e-19
3unz_A	279	Aurora A In Complex With Rpm1679 Length = 279		1e-19
2w1d_A	275	Structure Determination Of Aurora Kinase In Complex		2e-19
3e5a_A	268	Crystal Structure Of Aurora A In Complex With Vx-68		2e-19
3ha6_A	268	Crystal Structure Of Aurora A In Complex With Tpx2		2e-19
2w1c_A	275	Structure Determination Of Aurora Kinase In Complex		2e-19
3nrm_A	283	Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibito		2e-19
3qbn_A	281	Structure Of Human Aurora A In Complex With A Diami		2e-19
2dwb_A	285	Aurora-A Kinase Complexed With Amppnp Length = 285		2e-19
2wtv_A	285	Aurora-A Inhibitor Structure Length = 285		2e-19
3zut_A	362	The Structure Of Ost1 (D160a) Kinase Length = 362		2e-19
3h0y_A	268	Aurora A In Complex With A Bisanilinopyrimidine Len		2e-19
3qc4_A	314	Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length =		3e-19
3pwy_A	311	Crystal Structure Of An Extender (Spd28345)-Modifie		3e-19
1ol6_A	282	Structure Of Unphosphorylated D274n Mutant Of Auror		3e-19
2xne_A	272	Structure Of Aurora-A Bound To An Imidazopyrazine I		3e-19
3uc3_A	361	The Crystal Structure Of Snf1-Related Kinase 2.3 Le		3e-19
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		6e-19
3udb_A	317	Crystal Structure Of Snrk2.6 Length = 317		6e-19
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		6e-19
2yac_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		8e-18
3kb7_A	311	Crystal Structure Of Polo-Like Kinase 1 In Complex		8e-18
2v5q_A	315	Crystal Structure Of Wild-type Plk-1 Kinase Domain		8e-18
1mrv_A	339	Crystal Structure Of An Inactive Akt2 Kinase Domain		1e-17
2jdo_A	342	Structure Of Pkb-Beta (Akt2) Complexed With Isoquin		1e-17
1gzn_A	335	Structure Of Pkb Kinase Domain Length = 335		1e-17
1gzk_A	315	Molecular Mechanism For The Regulation Of Protein K		1e-17
1o6l_A	337	Crystal Structure Of An Activated Akt/protein Kinas		1e-17
1o6k_A	336	Structure Of Activated Form Of Pkb Kinase Domain S4		1e-17
3e87_A	335	Crystal Structures Of The Kinase Domain Of Akt2 In		1e-17
2rku_A	294	Structure Of Plk1 In Complex With Bi2536 Length = 2		1e-17
3thb_A	333	Structure Of Plk1 Kinase Domain In Complex With A B		2e-17
2ou7_A	335	Structure Of The Catalytic Domain Of Human Polo-Lik		2e-17
4af3_A	292	Human Aurora B Kinase In Complex With Incenp And Vx		2e-17
3pm8_A	197	Cad Domain Of Pff0520w, Calcium Dependent Protein K		2e-17
1s6i_A	188	Ca2+-Regulatory Region (Cld) From Soybean Calcium-D		5e-17
1vzo_A	355	The Structure Of The N-Terminal Kinase Domain Of Ms		5e-17
1fot_A	318	Structure Of The Unliganded Camp-Dependent Protein		7e-17
2bfy_A	284	Complex Of Aurora-B With Incenp And Hesperidin. Len		8e-17
2vrx_A	285	Structure Of Aurora B Kinase In Complex With Zm4474		8e-17
4gv1_A	340	Pkb Alpha In Complex With Azd5363 Length = 340		8e-17
3com_A	314	Crystal Structure Of Mst1 Kinase Length = 314		8e-17
2bfx_B	284	Mechanism Of Aurora-B Activation By Incenp And Inhi		8e-17
3cqu_A	342	Crystal Structure Of Akt-1 Complexed With Substrate		8e-17
3ocb_A	341	Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor		8e-17
4ejn_A	446	Crystal Structure Of Autoinhibited Form Of Akt1 In		1e-16
3o96_A	446	Crystal Structure Of Human Akt1 With An Allosteric		1e-16
2x7f_A	326	Crystal Structure Of The Kinase Domain Of Human Tra		1e-16
4el9_A	305	Structure Of N-Terminal Kinase Domain Of Rsk2 With		1e-16
3ubd_A	304	Structure Of N-Terminal Domain Of Rsk2 Kinase In Co		1e-16
3g51_A	325	Structural Diversity Of The Active Conformation Of		1e-16
2zv2_A	298	Crystal Structure Of Human CalciumCALMODULIN-Depend		2e-16
1yhv_A	297	Crystal Structure Of Pak1 Kinase Domain With Two Po		2e-16
3fxz_A	297	Crystal Structure Of Pak1 Kinase Domain With Ruthen		3e-16
3txo_A	353	Pkc Eta Kinase In Complex With A Naphthyridine Leng		4e-16
3db6_A	301	Crystal Structure Of An Activated (Thr->asp) Polo-L		4e-16
3d5v_A	317	Crystal Structure Of An Activated (Thr->asp) Polo-L		4e-16
1f3m_C	297	Crystal Structure Of Human SerineTHREONINE KINASE P		4e-16
3a60_A	327	Crystal Structure Of Unphosphorylated P70s6k1 (Form		4e-16
3a62_A	327	Crystal Structure Of Phosphorylated P70s6k1 Length		5e-16
2qc6_A	332	Protein Kinase Ck2 In Complex With Dbc Length = 332		5e-16
3q52_A	306	Structure Of Phosphorylated Pak1 Kinase Domain Leng		5e-16
3kxg_A	327	Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun		5e-16
3pvg_A	331	Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C		5e-16
4dgn_A	326	Crystal Structure Of Maize Ck2 In Complex With The		6e-16
1ds5_A	332	Dimeric Crystal Structure Of The Alpha Subunit In C		6e-16
4dgm_A	326	Crystal Structure Of Maize Ck2 In Complex With The		6e-16
1daw_A	327	Crystal Structure Of A Binary Complex Of Protein Ki		6e-16
1m2p_A	325	Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra		6e-16
4anm_A	335	Complex Of Ck2 With A Cdc7 Inhibitor Length = 335		6e-16
2z7q_A	321	Crystal Structure Of The N-Terminal Kinase Domain O		7e-16
2pvh_A	352	Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri		1e-15
3q4z_A	306	Structure Of Unphosphorylated Pak1 Kinase Domain Le		1e-15
3d5u_A	317	Crystal Structure Of A Wildtype Polo-Like Kinase 1		2e-15
3d5w_A	317	Crystal Structure Of A Phosphorylated Polo-Like Kin		3e-15
2jfm_A	325	Crystal Structure Of Human Ste20-Like Kinase (Unlig		3e-15
2j51_A	325	Crystal Structure Of Human Ste20-Like Kinase Bound		3e-15
3dls_A	335	Crystal Structure Of Human Pas Kinase Bound To Adp		4e-15
2jfl_A	325	Crystal Structure Of Human Ste20-Like Kinase ( Diph		4e-15
3juh_A	335	Crystal Structure Of A Mutant Of Human Protein Kina		6e-15
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		6e-15
4a4x_A	279	Nek2-Ede Bound To Cct248662 Length = 279		7e-15
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		7e-15
3h30_A	334	Crystal Structure Of The Catalytic Subunit Of Human		8e-15
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		8e-15
3nga_A	333	Human Ck2 Catalytic Domain In Complex With Cx-4945		8e-15
1pjk_A	334	Crystal Structure Of A C-terminal Deletion Mutant O		9e-15
3mb6_A	331	Human Ck2 Catalytic Domain In Complex With A Difura		9e-15
2uv2_A	287	Crystal Structure Of Human Ste20-Like Kinase Bound		9e-15
2r7i_A	335	Crystal Structure Of Catalytic Subunit Of Protein K		9e-15
4dgl_C	335	Crystal Structure Of The Ck2 Tetrameric Holoenzyme		9e-15
3bqc_A	335	High Ph-Value Crystal Structure Of Emodin In Comple		9e-15
2vwi_A	303	Structure Of The Osr1 Kinase, A Hypertension Drug T		9e-15
3q04_A	328	Crystal Structure Of The Apo-Form Of Human Ck2 Alph		9e-15
3nsz_A	330	Human Ck2 Catalytic Domain In Complex With Amppn Le		1e-14
1jwh_A	337	Crystal Structure Of Human Protein Kinase Ck2 Holoe		1e-14
3q9w_A	336	Crystal Structure Of Human Ck2 Alpha In Complex Wit		1e-14
3dak_A	290	Crystal Structure Of Domain-Swapped Osr1 Kinase Dom		1e-14
3u87_A	349	Structure Of A Chimeric Construct Of Human Ck2alpha		1e-14
2zjw_A	340	Crystal Structure Of Human Ck2 Alpha Complexed With		1e-14
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		1e-14
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		1e-14
4bc6_A	293	Crystal Structure Of Human Serine Threonine Kinase-		1e-14
2w5a_A	279	Human Nek2 Kinase Adp-Bound Length = 279		1e-14
2jed_A	352	The Crystal Structure Of The Kinase Domain Of The P		2e-14
2j7t_A	302	Crystal Structure Of Human Serine Threonine Kinase-		2e-14
2jav_A	279	Human Kinase With Pyrrole-Indolinone Ligand Length		2e-14
1xjd_A	345	Crystal Structure Of Pkc-Theta Complexed With Staur		3e-14
3h9f_A	313	Crystal Structure Of Human Dual Specificity Protein		3e-14
3hmn_A	342	Crystal Structure Of Human Mps1 Catalytic Domain In		3e-14
2x9e_A	317	Human Mps1 In Complex With Nms-P715 Length = 317		3e-14
3cek_A	313	Crystal Structure Of Human Dual Specificity Protein		3e-14
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		4e-14
3vqu_A	320	Crystal Structure Of Human Mps1 Catalytic Domain In		4e-14
1yxs_A	293	Crystal Structure Of Kinase Pim1 With P123m Mutatio		4e-14
4dc2_A	396	Structure Of Pkc In Complex With A Substrate Peptid		5e-14
2zmc_A	390	Crystal Structure Of Human Mitotic Checkpoint Kinas		5e-14
3dbq_A	343	Crystal Structure Of Ttk Kinase Domain Length = 343		5e-14
2zmd_A	390	Crystal Structure Of Human Mps1 Catalytic Domain T6		5e-14
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		6e-14
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		6e-14
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		6e-14
1zrz_A	364	Crystal Structure Of The Catalytic Domain Of Atypic		6e-14
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		6e-14
4exu_A	371	Mapk13, Inactive Form Length = 371		7e-14
3zh8_A	349	A Novel Small Molecule Apkc Inhibitor Length = 349		7e-14
3a8w_A	345	Crystal Structure Of Pkciota Kinase Domain Length =		7e-14
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		9e-14
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		9e-14
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		9e-14
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		9e-14
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		1e-13
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		1e-13
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		1e-13
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		1e-13
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		1e-13
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		1e-13
4dtk_A	276	Novel And Selective Pan-Pim Kinase Inhibitor Length		1e-13
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		1e-13
4alu_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		1e-13
3c4e_A	273	Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7		1e-13
4aw2_A	437	Crystal Structure Of Cdc42 Binding Protein Kinase A		1e-13
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		1e-13
3jxw_A	294	Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-		1e-13
1xws_A	313	Crystal Structure Of The Human Pim1 Kinase Domain L		1e-13
3uix_A	298	Crystal Structure Of Pim1 Kinase In Complex With Sm		1e-13
3r00_A	299	The Discovery Of Novel Benzofuran-2-Carboxylic Acid		1e-13
1ywv_A	293	Crystal Structures Of Proto-Oncogene Kinase Pim1: A		1e-13
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		1e-13
1xqz_A	300	Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolut		1e-13
1yhs_A	273	Crystal Structure Of Pim-1 Bound To Staurosporine L		1e-13
2xj0_A	301	Protein Kinase Pim-1 In Complex With Fragment-4 Fro		1e-13
4alv_A	328	Benzofuropyrimidinone Inhibitors Of Pim-1 Length =		1e-13
2r5t_A	373	Crystal Structure Of Inactive Serum And Glucocortic		2e-13
3a99_A	320	Structure Of Pim-1 Kinase Crystallized In The Prese		2e-13
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		2e-13
4a7c_A	308	Crystal Structure Of Pim1 Kinase With Etp46546 Leng		2e-13
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		2e-13
3dcv_A	328	Crystal Structure Of Human Pim1 Kinase Complexed Wi		2e-13
2xiy_A	301	Protein Kinase Pim-1 In Complex With Fragment-2 Fro		2e-13
3f2a_A	300	Crystal Structure Of Human Pim-1 In Complex With Da		2e-13
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		2e-13
2obj_A	333	Crystal Structure Of Human Pim-1 Kinase In Complex		2e-13
2xix_A	301	Protein Kinase Pim-1 In Complex With Fragment-1 Fro		2e-13
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		3e-13
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		3e-13
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		3e-13
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		3e-13
3sg7_A	448	Crystal Structure Of Gcamp3-Kf(Linker 1) Length = 4		3e-13
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		3e-13
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		3e-13
4djc_A	152	1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCA		3e-13
3ofm_A	350	Structure Of A Human Ck2alpha Prime, The Paralog Is		3e-13
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		4e-13
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		4e-13
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		4e-13
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		4e-13
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		4e-13
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		4e-13
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		4e-13
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		4e-13
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		4e-13
3e3b_X	339	Crystal Structure Of Catalytic Subunit Of Human Pro		4e-13
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		4e-13
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		4e-13
3qfv_A	415	Mrck Beta In Complex With Tpca-1 Length = 415		4e-13
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		4e-13
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		4e-13
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		4e-13
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		4e-13
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		4e-13
3sg5_A	448	Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linke		4e-13
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		4e-13
1ooj_A	149	Structural Genomics Of Caenorhabditis Elegans : Cal		4e-13
3tku_A	433	Mrck Beta In Complex With Fasudil Length = 433		4e-13
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		4e-13
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		4e-13
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		4e-13
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		4e-13
3sg4_A	448	Crystal Structure Of Gcamp3-D380y, Lp(Linker 2) Len		5e-13
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		5e-13
2acx_A	576	Crystal Structure Of G Protein Coupled Receptor Kin		6e-13
3sg3_A	449	Crystal Structure Of Gcamp3-D380y Length = 449		6e-13
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		6e-13
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		6e-13
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		6e-13
3u0k_A	440	Crystal Structure Of The Genetically Encoded Calciu		6e-13
2f2o_A	179	Structure Of Calmodulin Bound To A Calcineurin Pept		6e-13
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		7e-13
2j2i_B	312	Crystal Structure Of The Humab Pim1 In Complex With		7e-13
4as0_A	273	Cyclometalated Phthalimides As Protein Kinase Inhib		7e-13
3nyn_A	576	Crystal Structure Of G Protein-Coupled Receptor Kin		7e-13
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		7e-13
3jpv_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		8e-13
2bil_B	313	The Human Protein Kinase Pim1 In Complex With Its C		8e-13
3sg6_A	450	Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1) L		8e-13
3cxw_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		8e-13
3ek8_A	449	Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER L		9e-13
3evu_A	449	Crystal Structure Of Calcium Bound Dimeric Gcamp2,		9e-13
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		1e-12
1exr_A	148	The 1.0 Angstrom Crystal Structure Of Ca+2 Bound Ca		1e-12
1clm_A	148	Structure Of Paramecium Tetraurelia Calmodulin At 1		1e-12
3ma3_A	313	Crystal Structure Of Human Proto-Oncogene Serine Th		1e-12
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		1e-12
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		1e-12
2wel_D	150	Crystal Structure Of Su6656-Bound CalciumCALMODULIN		1e-12
2k0j_A	148	Solution Structure Of Cam Complexed To Drp1p Length		1e-12
1vrk_A	148	The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20		1e-12
2bik_B	313	Human Pim1 Phosphorylated On Ser261 Length = 313		1e-12
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		1e-12
3cy3_A	314	Crystal Structure Of Human Proto-Oncogene Serine Th		1e-12
2bkh_B	149	Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Struc		1e-12
3evr_A	411	Crystal Structure Of Calcium Bound Monomeric Gcamp2		1e-12
2ygg_B	150	Complex Of Cambr And Cam Length = 150		1e-12
1xfu_O	149	Crystal Structure Of Anthrax Edema Factor (ef) Trun		1e-12
3o78_A	415	The Structure Of Ca2+ Sensor (Case-12) Length = 415		1e-12
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		1e-12
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		2e-12
3o77_A	415	The Structure Of Ca2+ Sensor (Case-16) Length = 415		2e-12
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		2e-12
1iq5_A	149	CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE		2e-12
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		2e-12
2be6_A	150	2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaC		2e-12
3sg2_A	449	Crystal Structure Of Gcamp2-T116v,D381y Length = 44		2e-12
3k21_A	191	Crystal Structure Of Carboxy-Terminus Of Pfc0420w L		2e-12
3l19_A	214	Crystal Structure Of Calcium Binding Domain Of Cpcd		2e-12
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		2e-12
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		2e-12
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		2e-12
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		2e-12
3iw4_A	360	Crystal Structure Of Pkc Alpha In Complex With Nvp-		2e-12
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		2e-12
3ekh_A	449	Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER		3e-12
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		3e-12
2bbm_A	148	Solution Structure Of A Calmodulin-Target Peptide C		3e-12
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		3e-12
2lv6_A	148	The Complex Between Ca-calmodulin And Skeletal Musc		3e-12
1qtx_A	148	The 1.65 Angstrom Structure Of Calmodulin Rs20 Pept		3e-12
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		3e-12
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		3e-12
2vb6_B	149	Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigo		3e-12
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		3e-12
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		3e-12
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		3e-12
3ewt_A	154	Crystal Structure Of Calmodulin Complexed With A Pe		3e-12
1cm1_A	148	Motions Of Calmodulin-Single-Conformer Refinement L		3e-12
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		3e-12
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		3e-12
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		3e-12
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		3e-12
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		3e-12
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		3e-12
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		3e-12
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		3e-12
1prw_A	149	Crystal Structure Of Bovine Brain Ca++ Calmodulin I		3e-12
1up5_B	148	Chicken Calmodulin Length = 148		3e-12
1cdl_A	147	Target Enzyme Recognition By Calmodulin: 2.4 Angstr		3e-12
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		3e-12
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		3e-12
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		4e-12
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		4e-12
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		4e-12
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		4e-12
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		4e-12
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		4e-12
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		4e-12
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		4e-12
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		4e-12
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		4e-12
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		4e-12
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		4e-12
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		4e-12
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		4e-12
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		4e-12
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		4e-12
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		4e-12
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		4e-12
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		4e-12
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		4e-12
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		4e-12
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		4e-12
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		4e-12
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		4e-12
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		5e-12
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		5e-12
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		5e-12
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		5e-12
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		5e-12
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		5e-12
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		5e-12
4aqr_A	149	Crystal Structure Of A Calmodulin In Complex With T		5e-12
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		5e-12
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		5e-12
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		5e-12
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		5e-12
3f61_A	311	Crystal Structure Of M. Tuberculosis Pknb Leu33aspV		5e-12
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		5e-12
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		5e-12
1xh9_A	350	Crystal Structures Of Protein Kinase B Selective In		5e-12
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		5e-12
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		5e-12
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		5e-12
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		5e-12
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		5e-12
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		5e-12
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		5e-12
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		5e-12
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		5e-12
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		5e-12
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		5e-12
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		5e-12
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		6e-12
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		6e-12
1qs7_A	145	The 1.8 Angstrom Structure Of Calmodulin Rs20 Pepti		6e-12
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		6e-12
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		6e-12
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		6e-12
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		6e-12
2oza_B	366	Structure Of P38alpha Complex Length = 366		6e-12
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		6e-12
2vay_A	146	Calmodulin Complexed With Cav1.1 Iq Peptide Length		6e-12
3hec_A	348	P38 In Complex With Imatinib Length = 348		6e-12
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		6e-12
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		6e-12
1cdm_A	144	Modulation Of Calmodulin Plasticity In Molecular Re		7e-12
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		7e-12
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		7e-12
2lmt_A	148	Nmr Structure Of Androcam Length = 148		7e-12
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		7e-12
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		7e-12
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		7e-12
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		8e-12
4gow_D	144	Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX		8e-12
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		8e-12
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		8e-12
2gu8_A	337	Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel		8e-12
3c4c_A	280	B-Raf Kinase In Complex With Plx4720 Length = 280		9e-12
1dmo_A	148	Calmodulin, Nmr, 30 Structures Length = 148		9e-12
1y0v_H	146	Crystal Structure Of Anthrax Edema Factor (Ef) In C		9e-12
2ix7_A	145	Structure Of Apo-Calmodulin Bound To Unconventional		9e-12
1deg_A	142	The Linker Of Des-Glu84 Calmodulin Is Bent As Seen		1e-11
1k93_D	144	Crystal Structure Of The Adenylyl Cyclase Domain Of		1e-11
3v8s_A	410	Human Rho-Associated Protein Kinase 1 (Rock 1) In C		1e-11
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		1e-11
2v55_A	406	Mechanism Of Multi-site Phosphorylation From A Rock		1e-11
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		1e-11
2l1w_A	149	The Solution Structure Of Soybean Calmodulin Isofor		1e-11
2esm_A	415	Crystal Structure Of Rock 1 Bound To Fasudil Length		1e-11
2i0e_A	353	Structure Of Catalytic Domain Of Human Protein Kina		1e-11
1smh_A	350	Protein Kinase A Variant Complex With Completely Or		1e-11
1q61_A	350	Pka Triple Mutant Model Of Pkb Length = 350		1e-11
2vo0_A	351	Structure Of Pka-Pkb Chimera Complexed With C-(4-(4		1e-11
2jdt_A	351	Structure Of Pka-Pkb Chimera Complexed With Isoquin		1e-11
1syk_A	350	Crystal Structure Of E230q Mutant Of Camp-Dependent		1e-11
2qur_A	350	Crystal Structure Of F327aK285P MUTANT OF CAMP-Depe		1e-11
3l9m_A	351	Crystal Structure Of Pkab3 (Pka Triple Mutant V123a		1e-11
3fhi_A	350	Crystal Structure Of A Complex Between The Catalyti		2e-11
4fk3_A	292	B-Raf Kinase V600e Oncogenic Mutant In Complex With		2e-11
3pfq_A	674	Crystal Structure And Allosteric Activation Of Prot		2e-11
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		2e-11
1ydt_E	350	Structure Of Camp-Dependent Protein Kinase, Alpha-C		2e-11
2f7e_E	351	Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoqu		2e-11
1svh_A	350	Crystal Structure Of Protein Kinase A In Complex Wi		2e-11
4ae6_A	343	Structure And Function Of The Human Sperm-specific		2e-11
3nx8_A	351	Human Camp Dependent Protein Kinase In Complex With		2e-11
2uzt_A	336	Pka Structures Of Akt, Indazole-Pyridine Inhibitors		2e-11
2c1a_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		2e-11
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		2e-11
3agm_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		2e-11
2erz_E	351	Crystal Structure Of C-amp Dependent Kinase (pka) B		2e-11
1fmo_E	350	Crystal Structure Of A Polyhistidine-Tagged Recombi		2e-11
1rfj_A	149	Crystal Structure Of Potato Calmodulin Pcm6 Length		2e-11
3agl_A	351	Complex Of Pka With The Bisubstrate Protein Kinase		2e-11
1bkx_A	350	A Binary Complex Of The Catalytic Subunit Of Camp-D		2e-11
4dfy_A	371	Crystal Structure Of R194a Mutant Of Camp-Dependent		2e-11
1ctp_E	350	Structure Of The Mammalian Catalytic Subunit Of Cam		2e-11
3mvj_A	371	Human Cyclic Amp-Dependent Protein Kinase Pka Inhib		2e-11
3dnd_A	350	Camp-Dependent Protein Kinase Pka Catalytic Subunit		2e-11
1cdk_A	350	Camp-Dependent Protein Kinase Catalytic Subunit (E.		2e-11
1cmk_E	350	Crystal Structures Of The Myristylated Catalytic Su		2e-11
1stc_E	350	Camp-Dependent Protein Kinase, Alpha-Catalytic Subu		2e-11
1jbp_E	350	Crystal Structure Of The Catalytic Subunit Of Camp-		2e-11
2gcd_A	309	Tao2 Kinase Domain-Staurosporine Structure Length =		2e-11
1j3h_A	350	Crystal Structure Of Apoenzyme Camp-Dependent Prote		2e-11
1szm_A	350	Dual Binding Mode Of Bisindolylmaleimide 2 To Prote		2e-11
2uvy_A	351	Structure Of Pka-pkb Chimera Complexed With Methyl-		2e-11
1u5q_A	348	Crystal Structure Of The Tao2 Kinase Domain: Activa		2e-11
2lhi_A	176	Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam L		2e-11
3khe_A	191	Crystal Structure Of The Calcium-Loaded Calmodulin-		2e-11
2xik_A	294	Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related K		2e-11
1apm_E	350	2.0 Angstrom Refined Crystal Structure Of The Catal		3e-11
4dg3_E	371	Crystal Structure Of R336a Mutant Of Camp-dependent		3e-11
2jds_A	351	Structure Of Camp-Dependent Protein Kinase Complexe		3e-11
1q24_A	350	Pka Double Mutant Model Of Pkb In Complex With Mgat		3e-11
4ae9_A	343	Structure And Function Of The Human Sperm-specific		3e-11
3ama_A	351	Protein Kinase A Sixfold Mutant Model Of Aurora B W		3e-11
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		3e-11
2gnj_A	350	Pka Three Fold Mutant Model Of Rho-Kinase With Y-27		3e-11
2qcs_A	350	A Complex Structure Between The Catalytic And Regul		3e-11
1xh7_A	350	Crystal Structures Of Protein Kinase B Selective In		3e-11
3qal_E	350	Crystal Structure Of Arg280ala Mutant Of Catalytic		3e-11
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		3e-11
1q8w_A	350	The Catalytic Subunit Of Camp-Dependent Protein Kin		3e-11
1l3r_E	350	Crystal Structure Of A Transition State Mimic Of Th		3e-11
4dfx_E	350	Crystal Structure Of Myristoylated K7c Catalytic Su		3e-11
3pvb_A	345	Crystal Structure Of (73-244)ria:c Holoenzyme Of Ca		3e-11
3f69_A	311	Crystal Structure Of The Mycobacterium Tuberculosis		3e-11
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		4e-11
3o7l_B	350	Crystal Structure Of Phospholamban (1-19):pka C-Sub		4e-11
3og7_A	289	B-Raf Kinase V600e Oncogenic Mutant In Complex With		4e-11
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		5e-11
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		5e-11
1ahr_A	146	Calmodulin Mutant With A Two Residue Deletion In Th		6e-11
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		6e-11
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		6e-11
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		6e-11
1mru_A	311	Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycob		6e-11
2f2u_A	402	Crystal Structure Of The Rho-Kinase Kinase Domain L		6e-11
3ori_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain L33d		6e-11
2wtk_C	305	Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo2		6e-11
3orm_A	311	Mycobacterium Tuberculosis Pknb Kinase Domain D76a		6e-11
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		6e-11
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		8e-11
2gng_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		8e-11
2gnf_A	350	Protein Kinase A Fivefold Mutant Model Of Rho-Kinas		8e-11
3qam_E	350	Crystal Structure Of Glu208ala Mutant Of Catalytic		9e-11
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		9e-11
3o4y_A	196	Crystal Structure Of Cad Domain Of The Plasmodium V		1e-10
3sls_A	304	Crystal Structure Of Human Mek-1 Kinase In Complex		1e-10
1mf8_B	170	Crystal Structure Of Human Calcineurin Complexed Wi		1e-10
1tco_B	169	Ternary Complex Of A Calcineurin A Fragment, Calcin		1e-10
3ggf_A	301	Crystal Structure Of Human SerineTHREONINE-Protein		1e-10
3zhp_C	294	Human Mst3 (stk24) In Complex With Mo25beta Length		1e-10
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		1e-10
1lkj_A	146	Nmr Structure Of Apo Calmodulin From Yeast Saccharo		1e-10
2dyl_A	318	Crystal Structure Of Human Mitogen-Activated Protei		2e-10
4an2_A	301	Crystal Structures Of Human Mek1 With Carboxamide-B		2e-10
1o6y_A	299	Catalytic Domain Of Pknb Kinase From Mycobacterium		2e-10
3a7f_A	303	Human Mst3 Kinase Length = 303		2e-10
3ckw_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-10
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		2e-10
4eqm_A	294	Structural Analysis Of Staphylococcus Aureus Serine		2e-10
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		2e-10
3ckx_A	304	Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3		2e-10
1rdq_E	350	Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of		2e-10
3orn_A	307	Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In		3e-10
2pml_X	348	Crystal Structure Of Pfpk7 In Complex With An Atp A		3e-10
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		3e-10
2vd5_A	412	Structure Of Human Myotonic Dystrophy Protein Kinas		3e-10
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		4e-10
1xfx_O	149	Crystal Structure Of Anthrax Edema Factor (Ef) In C		4e-10
3aln_A	327	Crystal Structure Of Human Non-Phosphorylated Mkk4		5e-10
1niw_A	148	Crystal Structure Of Endothelial Nitric Oxide Synth		5e-10
2p6b_B	156	Crystal Structure Of Human Calcineurin In Complex W		5e-10
4fr4_A	384	Crystal Structure Of Human SerineTHREONINE-Protein		5e-10
4apc_A	350	Crystal Structure Of Human Nima-Related Kinase 1 (N		6e-10
3c4x_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		7e-10
3c4w_A	543	Crystal Structure Of G Protein Coupled Receptor Kin		7e-10
3t8o_A	543	Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolu		7e-10
3qc9_A	543	Crystal Structure Of Cross-Linked Bovine Grk1 T8cN4		7e-10
3sdj_A	448	Structure Of Rnase-Inactive Point Mutant Of Oligome		9e-10
3fbv_A	448	Crystal Structure Of The Oligomer Formed By The Kin		9e-10
1ggz_A	148	Crystal Structure Of The Calmodulin-Like Protein (H		9e-10
4ds7_A	147	Crystal Structure Of Yeast Calmodulin Bound To The		9e-10
3ll8_B	155	Crystal Structure Of Calcineurin In Complex With Ak		1e-09
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		1e-09
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		1e-09
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		1e-09
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		1e-09
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		1e-09
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		1e-09
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		1e-09
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		1e-09
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		1e-09
2iwi_A	312	Crystal Structure Of The Human Pim2 In Complex With		1e-09
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		1e-09
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		1e-09
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		1e-09
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		1e-09
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		1e-09
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		1e-09
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		1e-09
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		1e-09
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		1e-09
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		1e-09
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		2e-09
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		2e-09
2rio_A	434	Structure Of The Dual Enzyme Ire1 Reveals The Basis		2e-09
3lj0_A	434	Ire1 Complexed With Adp And Quercetin Length = 434		2e-09
3rzf_A	677	Crystal Structure Of Inhibitor Of Kappab Kinase Bet		2e-09
3qa8_A	676	Crystal Structure Of Inhibitor Of Kappa B Kinase Be		2e-09
3qrx_A	169	Chlamydomonas Reinhardtii Centrin Bound To Melittin		2e-09
3mse_B	180	Crystal Structure Of C-Terminal Domain Of Pf110239		3e-09
2clq_A	295	Structure Of Mitogen-Activated Protein Kinase Kinas		3e-09
1y6w_A	148	Trapped Intermediate Of Calmodulin Length = 148		3e-09
3vw6_A	269	Crystal Structure Of Human Apoptosis Signal-Regulat		3e-09
2lhh_A	128	Solution Structure Of Ca2+-Bound Ycam Length = 128		4e-09
2lan_A	167	Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc		8e-09
4aw5_A	291	Complex Of The Ephb4 Kinase Domain With An Oxindole		8e-09
3q96_A	282	B-Raf Kinase Domain In Complex With A Tetrahydronap		8e-09
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		8e-09
3ii5_A	306	The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimi		8e-09
4dbn_A	284	Crystal Structure Of The Kinase Domain Of Human B-R		8e-09
2fb8_A	281	Structure Of The B-Raf Kinase Domain Bound To Sb-59		8e-09
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		9e-09
2rei_A	318	Kinase Domain Of Human Ephrin Type-a Receptor 7 (ep		9e-09
3d4q_A	307	Pyrazole-Based Inhibitors Of B-Raf Kinase Length =		9e-09
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		9e-09
4h58_A	275	Braf In Complex With Compound 3 Length = 275		9e-09
1s6j_A	87	N-Terminal Region Of The Ca2+-Saturated Calcium Reg		1e-08
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		1e-08
1zy4_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-08
4g9r_A	307	B-Raf V600e Kinase Domain Bound To A Type Ii Dihydr		2e-08
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		2e-08
3idp_A	300	B-Raf V600e Kinase Domain In Complex With An Aminoi		2e-08
1uwj_A	276	The Complex Of Mutant V599e B-raf And Bay439006 Len		2e-08
1uwh_A	276	The Complex Of Wild Type B-Raf And Bay439006 Length		2e-08
1jpa_A	312	Crystal Structure Of Unphosphorylated Ephb2 Recepto		2e-08
3omv_A	307	Crystal Structure Of C-Raf (Raf-1) Length = 307		2e-08
1a2x_A	159	Complex Of Troponin C With A 47 Residue (1-47) Frag		2e-08
3ox6_A	153	Crystal Structure Of The Calcium Sensor Calcium-Bin		3e-08
2vwu_A	302	Ephb4 Kinase Domain Inhibitor Complex Length = 302		3e-08
2r2p_A	295	Kinase Domain Of Human Ephrin Type-A Receptor 5 (Ep		3e-08
1tnw_A	162	Nmr Solution Structure Of Calcium Saturated Skeleta		3e-08
4eut_A	396	Structure Of Bx-795 Complexed With Unphosphorylated		3e-08
3ox5_A	153	Crystal Structure Of The Calcium Sensor Calcium-Bin		3e-08
3p23_A	432	Crystal Structure Of The Human Kinase And Rnase Dom		3e-08
4euu_A	319	Structure Of Bx-795 Complexed With Human Tbk1 Kinas		3e-08
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		4e-08
3kf9_A	149	Crystal Structure Of The SdcenSKMLCK COMPLEX Length		4e-08
5tnc_A	162	Refined Crystal Structure Of Troponin C From Turkey		4e-08
1tcf_A	159	Crystal Structure Of Calcium-Saturated Rabbit Skele		5e-08
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		6e-08
1ytz_C	162	Crystal Structure Of Skeletal Muscle Troponin In Th		6e-08
2w49_0	159	Isometrically Contracting Insect Asynchronous Fligh		7e-08
2qoo_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		8e-08
2obh_A	143	Centrin-Xpc Peptide Length = 143		8e-08
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		8e-08
4tnc_A	162	Refined Structure Of Chicken Skeletal Muscle Tropon		8e-08
2qob_A	344	Human Epha3 Kinase Domain, Base Structure Length =		9e-08
2qoc_A	344	Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp		9e-08
2qol_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596:y		1e-07
2qo7_A	373	Human Epha3 Kinase And Juxtamembrane Region, Dephos		1e-07
3dzq_A	361	Human Epha3 Kinase Domain In Complex With Inhibitor		1e-07
2qof_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f		1e-07
2qod_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y602f		1e-07
2qoi_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-07
3fxx_A	371	Human Epha3 Kinase And Juxtamembrane Region Bound T		1e-07
2gsf_A	373	The Human Epha3 Receptor Tyrosine Kinase And Juxtam		1e-07
2hen_A	286	Crystal Structure Of The Ephb2 Receptor Kinase Doma		1e-07
2qon_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		1e-07
3vn9_A	340	Rifined Crystal Structure Of Non-Phosphorylated Map		1e-07
2xyu_A	285	Crystal Structure Of Epha4 Kinase Domain In Complex		2e-07
2y6m_A	291	Crystal Structure Of Epha4 Kinase Domain Length = 2		2e-07
1zyc_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		2e-07
2hel_A	306	Crystal Structure Of A Mutant Epha4 Kinase Domain (		2e-07
2qok_A	373	Human Epha3 Kinase And Juxtamembrane Region, Y596f:		2e-07
3fme_A	290	Crystal Structure Of Human Mitogen-Activated Protei		2e-07
1mqb_A	333	Crystal Structure Of Ephrin A2 (Epha2) Receptor Pro		3e-07
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		5e-07
3kul_A	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		5e-07
4dn5_A	356	Crystal Structure Of Nf-kb-inducing Kinase (nik) Le		5e-07
3p1a_A	311	Structure Of Human Membrane-Associated Tyrosine- An		5e-07
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		5e-07
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		6e-07
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		6e-07
2jnx_A	134	Nmr Derived Solution Structure Of An Ef-Hand Calciu		8e-07
4g3d_A	371	Crystal Structure Of Human Nf-kappab Inducing Kinas		8e-07
3cik_A	689	Human Grk2 In Complex With Gbetagamma Subunits Leng		9e-07
3krw_A	688	Human Grk2 In Complex With Gbetgamma Subunits And B		9e-07
3uiu_A	306	Crystal Structure Of Apo-Pkr Kinase Domain Length =		9e-07
1omw_A	689	Crystal Structure Of The Complex Between G Protein-		1e-06
3psc_A	695	Bovine Grk2 In Complex With Gbetagamma Subunits Len		1e-06
3rgf_A	405	Crystal Structure Of Human Cdk8CYCC Length = 405		1e-06
4f99_A	361	Human Cdc7 Kinase In Complex With Dbf4 And Nucleoti		1e-06
2k7c_A	72	Nmr Structure Of Mg2+-Bound Cabp1 C-Domain Length =		1e-06
3enm_A	316	The Structure Of The Map2k Mek6 Reveals An Autoinhi		1e-06
2nry_A	307	Crystal Structure Of Irak-4 Length = 307		1e-06
2nru_A	307	Crystal Structure Of Irak-4 Length = 307		1e-06
2eva_A	307	Structural Basis For The Interaction Of Tak1 Kinase		2e-06
4gs6_A	315	Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxoz		2e-06
2oib_A	301	Crystal Structure Of Irak4 Kinase Domain Apo Form L		2e-06
1s9i_A	354	X-Ray Structure Of The Human Mitogen-Activated Prot		2e-06
3mbl_A	328	Crystal Structure Of The Human Mitogen-Activated Pr		2e-06
3kul_B	325	Kinase Domain Of Human Ephrin Type-A Receptor 8 (Ep		2e-06
3dv3_A	322	Mek1 With Pf-04622664 Bound Length = 322		2e-06
2p55_A	333	X-Ray Structure Of The Human Mitogen-Activated Prot		2e-06
1s9j_A	341	X-Ray Structure Of The Human Mitogen-Activated Prot		2e-06
2y4i_C	395	Ksr2-Mek1 Heterodimer Length = 395		2e-06
3eqc_A	360	X-Ray Structure Of The Human Mitogen-Activated Prot		2e-06
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		3e-06
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		3e-06
2o8y_A	298	Apo Irak4 Kinase Domain Length = 298		3e-06
1bjf_A	193	Crystal Structure Of Recombinant Bovine Neurocalcin		3e-06
2wqm_A	310	Structure Of Apo Human Nek7 Length = 310		4e-06
3k2l_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		4e-06
3dtc_A	271	Crystal Structure Of Mixed-Lineage Kinase Mlk1 Comp		5e-06
1eh4_A	298	Binary Complex Of Casein Kinase-1 From S. Pombe Wit		7e-06
2csn_A	297	Binary Complex Of Casein Kinase-1 With Cki7 Length		7e-06
2a19_B	284	Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Leng		9e-06
3nr9_A	368	Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length		1e-05
1zxe_A	303	Crystal Structure Of Eif2alpha Protein Kinase Gcn2:		1e-05
2b1u_A	71	Solution Structure Of Calmodulin-Like Skin Protein		1e-05
1aj4_A	161	Structure Of Calcium-Saturated Cardiac Troponin C,		2e-05
1dtl_A	161	Crystal Structure Of Calcium-Saturated (3ca2+) Card		3e-05
4g31_A	299	Crystal Structure Of Gsk6414 Bound To Perk (R587-R1		3e-05
2h34_A	309	Apoenzyme Crystal Structure Of The Tuberculosis Ser		3e-05
2nxq_A	134	Crystal Structure Of Calcium Binding Protein 1 From		3e-05
3s95_A	310	Crystal Structure Of The Human Limk1 Kinase Domain		3e-05
1jfj_A	134	Nmr Solution Structure Of An Ef-Hand Calcium Bindin		4e-05
3nz0_A	302	Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 3		5e-05
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		5e-05
3ll6_A	337	Crystal Structure Of The Human Cyclin G Associated		5e-05
3lmg_A	344	Crystal Structure Of The Erbb3 Kinase Domain In Com		6e-05
1dgu_A	183	Homology-Based Model Of Calcium-Saturated Cib (Calc		6e-05
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		6e-05
2l4h_A	214	The Solution Structure Of Calcium Bound Cib1 Length		6e-05
2cmw_A	310	Structure Of Human Casein Kinase 1 Gamma-1 In Compl		7e-05
3kex_A	325	Crystal Structure Of The Catalytically Inactive Kin		7e-05
2bec_A	202	Crystal Structure Of Chp2 In Complex With Its Bindi		7e-05
2lv7_A	100	Solution Structure Of Ca2+-Bound Cabp7 N-Terminal D		7e-05
2pvy_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		7e-05
2ggm_A	172	Human Centrin 2 Xeroderma Pigmentosum Group C Prote		7e-05
3nyx_A	302	Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-T		7e-05
3j04_B	143	Em Structure Of The Heavy Meromyosin Subfragment Of		8e-05
2ggz_A	211	Crystal Structure Of Human Guanylate Cyclase Activa		8e-05
2pzi_A	681	Crystal Structure Of Protein Kinase Pkng From Mycob		9e-05
3lxn_A	318	Structural And Thermodynamic Characterization Of Th		9e-05
3cly_A	334	Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase		9e-05
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		1e-04
2eu9_A	355	Crystal Structure Of Clk3 Length = 355		1e-04
1q8y_A	373	The Structure Of The Yeast Sr Protein Kinase, Sky1p		1e-04
1how_A	373	The X-Ray Crystal Structure Of Sky1p, An Sr Protein		1e-04
2exe_A	357	Crystal Structure Of The Phosphorylated Clk3 Length		1e-04
2pvf_A	334	Crystal Structure Of Tyrosine Phosphorylated Activa		1e-04
2wu6_A	381	Crystal Structure Of The Human Clk3 In Complex With		1e-04
4e1z_A	291	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		1e-04
2c47_A	313	Structure Of Casein Kinase 1 Gamma 2 Length = 313		1e-04
4e20_A	290	Structure Of Mouse Tyk-2 Complexed To A 3-Aminoinda		1e-04
3h9r_A	330	Crystal Structure Of The Kinase Domain Of Type I Ac		1e-04
4dym_A	301	Crystal Structure Of The Acvr1 Kinase Domain In Com		1e-04
3bbt_B	328	Crystal Structure Of The Erbb4 Kinase In Complex Wi		1e-04
2psq_A	370	Crystal Structure Of Unphosphorylated Unactivated W		1e-04
3mtf_A	301	Crystal Structure Of The Acvr1 Kinase In Complex Wi		1e-04
2qkw_B	321	Structural Basis For Activation Of Plant Immunity B		2e-04
1la0_A	161	Solution Structure Of Calcium Saturated Cardiac Tro		2e-04
2pzp_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-04
2r4b_A	321	Erbb4 Kinase Domain Complexed With A Thienopyrimidi		2e-04
1gjo_A	316	The Fgfr2 Tyrosine Kinase Domain Length = 316		2e-04
2q0b_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-04
3hgk_A	327	Crystal Structure Of Effect Protein Avrptob Complex		2e-04
2pz5_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-04
2py3_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-04
2pwl_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		2e-04
3b2t_A	311	Structure Of Phosphotransferase Length = 311		2e-04
1z57_A	339	Crystal Structure Of Human Clk1 In Complex With 10z		2e-04
3my0_A	305	Crystal Structure Of The Acvrl1 (Alk1) Kinase Domai		2e-04
3ri1_A	313	Crystal Structure Of The Catalytic Domain Of Fgfr2		2e-04
2qlu_A	314	Crystal Structure Of Activin Receptor Type Ii Kinas		2e-04
4asz_A	299	Crystal Structure Of Apo Trkb Kinase Domain Length		2e-04
4f0f_A	287	Crystal Structure Of The Roco4 Kinase Domain Bound		2e-04
3qd2_B	332	Crsytal Structure Of Mouse Perk Kinase Domain Lengt		2e-04
1s6c_A	183	Crystal Structure Of The Complex Between Kchip1 And		2e-04
1s1e_A	224	Crystal Structure Of Kv Channel-Interacting Protein		3e-04
3d7u_A	263	Structural Basis For The Recognition Of C-Src By It		3e-04
1f54_A	77	Solution Structure Of The Apo N-Terminal Domain Of		3e-04
3gop_A	361	Crystal Structure Of The Egf Receptor Juxtamembrane		3e-04
1byg_A	278	Kinase Domain Of Human C-Terminal Src Kinase (Csk)		3e-04
2pzr_A	324	Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase D		3e-04
3ifk_A	90	Crystal Structure Of Calcium-Saturated Calmodulin N		3e-04
2qq7_A	286	Crystal Structure Of Drug Resistant Src Kinase Doma		3e-04
2hwo_A	286	Crystal Structure Of Src Kinase Domain In Complex W		3e-04
1k9a_A	450	Crystal Structure Analysis Of Full-Length Carboxyl-		3e-04
3svv_A	286	Crystal Structure Of T338c C-Src Covalently Bound T		3e-04
2jiv_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		3e-04
2oiq_A	286	Crystal Structure Of Chicken C-Src Kinase Domain In		4e-04
2itn_A	327	Crystal Structure Of Egfr Kinase Domain G719s Mutat		4e-04
4hjo_A	337	Crystal Structure Of The Inactive Egfr Tyrosine Kin		4e-04
3bel_A	315	X-Ray Structure Of Egfr In Complex With Oxime Inhib		4e-04
1m14_A	333	Tyrosine Kinase Domain From Epidermal Growth Factor		4e-04
2eb2_A	334	Crystal Structure Of Mutated Egfr Kinase Domain (G7		4e-04
2jiu_A	328	Crystal Structure Of Egfr Kinase Domain T790m Mutat		4e-04
3g6h_A	286	Src Thr338ile Inhibited In The Dfg-Asp-Out Conforma		4e-04
2rfd_A	324	Crystal Structure Of The Complex Between The Egfr K		4e-04
2j5e_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		4e-04
3ug1_A	334	Crystal Structure Of The Mutated Egfr Kinase Domain		4e-04
2gs7_A	330	Crystal Structure Of The Inactive Egfr Kinase Domai		4e-04
4g5j_A	330	Crystal Structure Of Egfr Kinase In Complex With Bi		4e-04
3oez_A	286	Crystal Structure Of The L317i Mutant Of The Chicke		4e-04
2jit_A	327	Crystal Structure Of Egfr Kinase Domain T790m Mutat		4e-04
2j5f_A	327	Crystal Structure Of Egfr Kinase Domain In Complex		4e-04
2gs2_A	330	Crystal Structure Of The Active Egfr Kinase Domain		4e-04
4i24_A	329	Structure Of T790m Egfr Kinase Domain Co-crystalliz		4e-04
4g5p_A	330	Crystal Structure Of Egfr Kinase T790m In Complex W		4e-04
3vjo_A	334	Crystal Structure Of The Wild-Type Egfr Kinase Doma		4e-04
3dqw_A	286	C-Src Kinase Domain Thr338ile Mutant In Complex Wit		4e-04
4i23_A	329	Crystal Structure Of The Wild-type Egfr Kinase Doma		4e-04
3lzb_A	327	Egfr Kinase Domain Complexed With An Imidazo[2,1-B]		4e-04
3u4w_A	275	Src In Complex With Dna-Templated Macrocyclic Inhib		4e-04
3d7u_B	277	Structural Basis For The Recognition Of C-Src By It		4e-04
4gt5_A	306	Crystal Structure Of The Inactive Trka Kinase Domai		4e-04
3ika_A	331	Crystal Structure Of Egfr 696-1022 T790m Mutant Cov		4e-04
1xkk_A	352	Egfr Kinase Domain Complexed With A Quinazoline Inh		5e-04
4f0i_A	300	Crystal Structure Of Apo Trka Length = 300		5e-04
2vag_A	339	Crystal Structure Of Di-Phosphorylated Human Clk1 I		5e-04
3kpx_A	198	Crystal Structure Analysis Of Photoprotein Clytin L		5e-04
4aoj_A	329	Human Trka In Complex With The Inhibitor Az-23 Leng		5e-04
3anq_A	368	Human Dyrk1aINHIBITOR COMPLEX Length = 368		5e-04
3gqi_A	326	Crystal Structure Of Activated Receptor Tyrosine Ki		5e-04
2vx3_A	382	Crystal Structure Of The Human Dual Specificity Tyr		5e-04
2i2r_E	180	Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX Len		5e-04
3pp0_A	338	Crystal Structure Of The Kinase Domain Of Human Her		5e-04
3ppz_A	309	Crystal Structure Of Ctr1 Kinase Domain In Complex		5e-04
2y4i_B	319	Ksr2-Mek1 Heterodimer Length = 319		6e-04
2kn2_A	92	Solution Structure Of The C-Terminal Domain Of Soyb		6e-04
2jt0_A	161	Solution Structure Of F104w Cardiac Troponin C Leng		6e-04
2jt3_A	161	Solution Structure Of F153w Cardiac Troponin C Leng		6e-04
3sv0_A	483	Crystal Structure Of Casein Kinase-1 Like Protein I		6e-04
2nz0_A	180	Crystal Structure Of Potassium Channel Kv4.3 In Com		7e-04
3sxr_A	268	Crystal Structure Of Bmx Non-Receptor Tyrosine Kina		7e-04
3geq_A	286	Structural Basis For The Chemical Rescue Of Src Kin		7e-04
2r2i_A	198	Myristoylated Guanylate Cyclase Activating Protein-		7e-04
3miy_A	266	X-Ray Crystal Structure Of Itk Complexed With Sunit		7e-04
2jtz_A	161	Solution Structure And Chemical Shift Assignments O		8e-04
2jt8_A	161	Solution Structure Of The F153-To-5-Flurotryptophan		8e-04
3v5j_A	266	Crystal Structure Of Interleukin-2 Inducible T-Cell		8e-04
3t9t_A	267	Crystal Structure Of Btk Mutant (F435t,K596r) Compl		8e-04
2ptk_A	453	Chicken Src Tyrosine Kinase Length = 453		8e-04
3cjf_A	309	Crystal Structure Of Vegfr2 In Complex With A 3,4,5		8e-04
1sm2_A	264	Crystal Structure Of The Phosphorylated Interleukin		8e-04
2ami_A	96	Solution Structure Of The Calcium-Loaded N-Terminal		9e-04
4f1o_A	287	Crystal Structure Of The L1180t Mutant Roco4 Kinase		9e-04
4hct_A	269	Crystal Structure Of Itk In Complex With Compound 5		9e-04
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		9e-04
3qgw_A	286	Crystal Structure Of Itk Kinase Bound To An Inhibit		9e-04

>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In Complex With Ca2+ And Amppnp Length = 494

Iteration: 1
 Score =  231 bits (588), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 138/379 (36%), Positives = 214/379 (56%), Gaps = 28/379 (7%)
Query: 47  EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 106
           +GGEL D I+ +   ++ E DAAV+++Q+L      H H +VHRD+KPEN L +S ++D+
Sbjct: 119 KGGELFDEIIHR--MKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDA 176
Query: 107 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRP 166
            +K  DFGLS   +  KK ++ +G+AYY+APEVL++K   + DVWSIGVI +ILL G  P
Sbjct: 177 LIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPP 236
Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 226
           F  +T+  I ++V + K  F    W ++S  AKD +K++L  D + R++A QAL HPW++
Sbjct: 237 FGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIK 296
Query: 227 EGGDASEIPIDI----SVLNNMRQFVKYSRLKQFALRALASTL-DDEELADLRDQFDAID 281
           E     E  I++    + + NMR+F    +L Q AL  +AS L   EE  +L D F  ID
Sbjct: 297 EMCSKKESGIELPSLANAIENMRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRHID 356
Query: 282 VDKNGSISLEEMRQALAK---------DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 332
            + +G +  +E+    +K         DLP    ES V  IL A D + +G +D+SEFV 
Sbjct: 357 KNGDGQLDRQELIDGYSKLSGEEVAVFDLPQ--IESEVDAILGAADFDRNGYIDYSEFVT 414
Query: 333 ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL----KGSIDPLLEE 388
             +    L   D      + ++AF+KFD D +G I+ +EL    GL      +   ++  
Sbjct: 415 VAMDRKSLLSKD------KLESAFQKFDQDGNGKISVDELASVFGLDHLESKTWKEMISG 468
Query: 389 ADIDKDGRISLSEFRRLLR 407
            D + DG +   EF ++++
Sbjct: 469 IDSNNDGDVDFEEFCKMIQ 487

>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3, Tgme49_105860 Length = 467

Iteration: 1
 Score =  225 bits (574), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 133/379 (35%), Positives = 205/379 (54%), Gaps = 27/379 (7%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGEL D I+ ++  +++E DAAV+++Q+L      H H +VHRD+KPEN L +S   D+ 
Sbjct: 88  GGELFDEIILRQ--KFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDAL 145
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPF 167
           +K  DFGLS   + G K ++ +G+AYY+APEVL++K   + DVWS GVI YILLCG  PF
Sbjct: 146 IKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYDEKCDVWSCGVILYILLCGYPPF 205
Query: 168 WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
             +T+  I K V + K  F    W  +S+ AK  VK +L  +P  R++A +AL+HPW+ +
Sbjct: 206 GGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWIVK 265
Query: 228 GGDASEIPID----ISVLNNMRQFVKYSRLKQFALRALASTLDD-EELADLRDQFDAIDV 282
                   +        L NM++F    +L Q A+  + S L   EE  +L   F  +D 
Sbjct: 266 FCSQKHTDVGKHALTGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDN 325
Query: 283 DKNGSISLEEMRQALAKDLPWKLK----------ESRVLEILQAIDCNTDGLVDFSEFVA 332
           + +G +  +E+ +   K + WK            E+ V  ILQ++D + +G +++SEFV 
Sbjct: 326 NGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVT 385
Query: 333 ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSID----PLLEE 388
             +    L   +      R  AAF++FD D  G IT EEL    G+    D     +L+E
Sbjct: 386 VCMDKQLLLSRE------RLLAAFQQFDSDGSGKITNEELGRLFGVTEVDDETWHQVLQE 439
Query: 389 ADIDKDGRISLSEFRRLLR 407
            D + DG +   EF  +++
Sbjct: 440 CDKNNDGEVDFEEFVEMMQ 458

>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1, Cgd3_920 Length = 486

Iteration: 1
 Score =  215 bits (548), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 133/388 (34%), Positives = 208/388 (53%), Gaps = 32/388 (8%)
Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L  GGEL D I+ +K  R++E DAA +++Q+       H H +VHRD+KPEN L +S ++
Sbjct: 102 LYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEK 159
Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGR 164
           D  +K  DFGLS   +   K +D +G+AYY+APEVL+     + DVWS GVI YILL G 
Sbjct: 160 DCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGT 219
Query: 165 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 224
            PF+ K E  I K V   K  F    W +IS+ AKD ++K+L   P  R+TA Q L HPW
Sbjct: 220 PPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPW 279
Query: 225 VR----EGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDD-EELADLRDQFDA 279
           ++    E    S++P   S + N+RQF    +L Q AL  +AS L   +E   L + F  
Sbjct: 280 IQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQAALLYMASKLTTLDETKQLTEIFRK 339
Query: 280 IDVDKNGSISLEEMRQALAKDLPWKLKESRVL-------------EILQAIDCNTDGLVD 326
           +D + +G +  +E+ +   + +  K  +S  L              ++  +D +  G ++
Sbjct: 340 LDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIE 399
Query: 327 FSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEEL-RMHTGLKGSI--- 382
           +SEF+A+ +    L   +      R + AF+ FD D  G I+ +EL ++ +    SI   
Sbjct: 400 YSEFIASAIDRTILLSRE------RMERAFKMFDKDGSGKISTKELFKLFSQADSSIQME 453
Query: 383 --DPLLEEADIDKDGRISLSEFRRLLRT 408
             + ++E+ D +KDG +  +EF  +L+ 
Sbjct: 454 ELESIIEQVDNNKDGEVDFNEFVEMLQN 481

>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420 Length = 504

Iteration: 1
 Score =  210 bits (534), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 132/376 (35%), Positives = 204/376 (54%), Gaps = 23/376 (6%)
Query: 47  EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 106
           EGGEL ++I+ +   ++ E DAA +++Q+L      H H +VHRD+KPEN L ++     
Sbjct: 129 EGGELFEQIINR--HKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLL 186
Query: 107 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRP 166
           ++K  DFGLS F     K +D +G+AYY+APEVLK+K   + DVWS GVI YILLCG  P
Sbjct: 187 NIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPP 246
Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 226
           F  + +  I K+V + K  F    W +IS+ AK+ +K +L  D   R TA +AL+  W++
Sbjct: 247 FGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIK 306
Query: 227 EGG---DASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDD-EELADLRDQFDAIDV 282
           +     + S+       L+NMR+F    +L Q A+  + S L   EE  +L D F  +D 
Sbjct: 307 KYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAILFIGSKLTTLEERKELTDIFKKLDK 366
Query: 283 DKNGSISLEEMRQALA-----KDLPWKLK--ESRVLEILQAIDCNTDGLVDFSEFVAATL 335
           + +G +  +E+ +        K+   +LK  E  V  IL+ +D + +G +++SEF++  +
Sbjct: 367 NGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCM 426
Query: 336 HVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADI 391
               L   +      R + AF  FD D+ G IT EEL    GL      + + +L EAD 
Sbjct: 427 DKQILFSEE------RLRRAFNLFDTDKSGKITKEELANLFGLTSISEKTWNDVLGEADQ 480
Query: 392 DKDGRISLSEFRRLLR 407
           +KD  I   EF  ++ 
Sbjct: 481 NKDNMIDFDEFVSMMH 496

>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) Length = 484

Iteration: 1
 Score =  208 bits (529), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 128/378 (33%), Positives = 202/378 (53%), Gaps = 28/378 (7%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGEL D I+++K  R++E DAA ++RQ+L      H + +VHRD+KPEN L +S  +D++
Sbjct: 110 GGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDAN 167
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPF 167
           ++  DFGLS   +  KK +D +G+AYY+APEVL      + DVWS GVI YILL G  PF
Sbjct: 168 IRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPF 227
Query: 168 WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
               E  I K+V + K  F    W  +S SAKD ++K+L   P  R++A  AL H W+ +
Sbjct: 228 NGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWI-Q 286
Query: 228 GGDASEIPIDISVLN----NMRQFVKYSRLKQFALRALASTLDDE-ELADLRDQFDAIDV 282
                +I +D+  L+    N+RQF    +L Q AL  + S L  + E  +L   F  +D 
Sbjct: 287 TYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDK 346
Query: 283 DKNGSISLEEMRQALAKDLPWKLKESRVL----------EILQAIDCNTDGLVDFSEFVA 332
           + +G +   E+ +   + +  K +++ +L          ++L A+D + +G +++SEFV 
Sbjct: 347 NGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVT 406
Query: 333 ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEE 388
             +    L   +      R + AF  FD D  G I+  EL    G+      +   +L E
Sbjct: 407 VAMDRKTLLSRE------RLERAFRMFDSDNSGKISSTELATIFGVSDVDSETWKSVLSE 460
Query: 389 ADIDKDGRISLSEFRRLL 406
            D + DG +   EF+++L
Sbjct: 461 VDKNNDGEVDFDEFQQML 478

>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii, Tgme49_101440, In Presence Of Calcium Length = 508

Iteration: 1
 Score =  207 bits (528), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 128/378 (33%), Positives = 202/378 (53%), Gaps = 28/378 (7%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGEL D I+++K  R++E DAA ++RQ+L      H + +VHRD+KPEN L +S  +D++
Sbjct: 134 GGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDAN 191
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPF 167
           ++  DFGLS   +  KK +D +G+AYY+APEVL      + DVWS GVI YILL G  PF
Sbjct: 192 IRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPF 251
Query: 168 WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
               E  I K+V + K  F    W  +S SAKD ++K+L   P  R++A  AL H W++ 
Sbjct: 252 NGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQT 311
Query: 228 GGDASEIPIDISVLN----NMRQFVKYSRLKQFALRALASTLDDE-ELADLRDQFDAIDV 282
                +I +D+  L+    N+RQF    +L Q AL  + S L  + E  +L   F  +D 
Sbjct: 312 -YTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDK 370
Query: 283 DKNGSISLEEMRQALAKDLPWKLKESRVL----------EILQAIDCNTDGLVDFSEFVA 332
           + +G +   E+ +   + +  K +++ +L          ++L A+D + +G +++SEFV 
Sbjct: 371 NGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVT 430
Query: 333 ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEE 388
             +    L   +      R + AF  FD D  G I+  EL    G+      +   +L E
Sbjct: 431 VAMDRKTLLSRE------RLERAFRMFDSDNSGKISSTELATIFGVSDVDSETWKSVLSE 484
Query: 389 ADIDKDGRISLSEFRRLL 406
            D + DG +   EF+++L
Sbjct: 485 VDKNNDGEVDFDEFQQML 502

>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From Toxoplasma Gondii, Tgme49.101440 Length = 507

Iteration: 1
 Score =  207 bits (528), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 128/378 (33%), Positives = 202/378 (53%), Gaps = 28/378 (7%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGEL D I+++K  R++E DAA ++RQ+L      H + +VHRD+KPEN L +S  +D++
Sbjct: 133 GGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDAN 190
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPF 167
           ++  DFGLS   +  KK +D +G+AYY+APEVL      + DVWS GVI YILL G  PF
Sbjct: 191 IRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPF 250
Query: 168 WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
               E  I K+V + K  F    W  +S SAKD ++K+L   P  R++A  AL H W++ 
Sbjct: 251 NGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQT 310
Query: 228 GGDASEIPIDISVLN----NMRQFVKYSRLKQFALRALASTLDDE-ELADLRDQFDAIDV 282
                +I +D+  L+    N+RQF    +L Q AL  + S L  + E  +L   F  +D 
Sbjct: 311 -YTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKMDK 369
Query: 283 DKNGSISLEEMRQALAKDLPWKLKESRVL----------EILQAIDCNTDGLVDFSEFVA 332
           + +G +   E+ +   + +  K +++ +L          ++L A+D + +G +++SEFV 
Sbjct: 370 NGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVT 429
Query: 333 ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEE 388
             +    L   +      R + AF  FD D  G I+  EL    G+      +   +L E
Sbjct: 430 VAMDRKTLLSRE------RLERAFRMFDSDNSGKISSTELATIFGVSDVDSETWKSVLSE 483
Query: 389 ADIDKDGRISLSEFRRLL 406
            D + DG +   EF+++L
Sbjct: 484 VDKNNDGEVDFDEFQQML 501

>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii (Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2 Length = 484

Iteration: 1
 Score =  200 bits (508), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 130/378 (34%), Positives = 193/378 (51%), Gaps = 28/378 (7%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGEL D I+++K  R++E DAA ++RQ+L      H + +VHRD+KPEN L +S  +D++
Sbjct: 110 GGELFDEIISRK--RFSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLLESKSKDAN 167
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPF 167
           ++  DFGLS   +  KK +D +G+AYY+APEVL      + DVWS GVI YILL G  PF
Sbjct: 168 IRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPF 227
Query: 168 WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
               E  I K+V + K  F    W  +S SAKD ++K L   P  R++A  AL H W++ 
Sbjct: 228 NGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKXLTYVPSXRISARDALDHEWIQT 287
Query: 228 GGDASEIPIDISVLN----NMRQFVKYSRLKQFALRALASTLDDE-ELADLRDQFDAIDV 282
                +I +D+  L+    N+RQF    +L Q AL    S L  + E  +L   F   D 
Sbjct: 288 -YTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYXGSKLTSQDETKELTAIFHKXDK 346
Query: 283 DKNGSISLEEMRQAL----------AKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 332
           + +G +   E+ +            A  L     E  V ++L A+D + +G +++SEFV 
Sbjct: 347 NGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVT 406
Query: 333 ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEE 388
                  L   +      R + AF  FD D  G I+  EL    G+      +   +L E
Sbjct: 407 VAXDRKTLLSRE------RLERAFRXFDSDNSGKISSTELATIFGVSDVDSETWKSVLSE 460
Query: 389 ADIDKDGRISLSEFRRLL 406
            D + DG +   EF++ L
Sbjct: 461 VDKNNDGEVDFDEFQQXL 478

>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-320 In Complex With Atp Length = 320

Iteration: 1
 Score =  176 bits (446), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 97/221 (43%), Positives = 134/221 (60%), Gaps = 5/221 (2%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           ++L  GGEL DRI+ K    YTE+DA+ ++ Q+L      H  G+VHRD+KPEN L+ S 
Sbjct: 95  MQLVSGGELFDRIVEK--GFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSL 152
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILL 161
            EDS +  +DFGLS    PG       G+  YVAPEVL +K   ++ D WSIGVI YILL
Sbjct: 153 DEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 212
Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 221
           CG  PF+D+ +  +F+++L+ + +F    W  IS+SAKDF++ L+ KDP  R T  QAL 
Sbjct: 213 CGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ 272
Query: 222 HPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALA 262
           HPW+  G  A +  I  SV   +++    S+ KQ A  A A
Sbjct: 273 HPWIA-GDTALDKNIHQSVSEQIKKNFAKSKWKQ-AFNATA 311

>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-315 In Complex With Atp Length = 315

Iteration: 1
 Score =  176 bits (446), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 97/221 (43%), Positives = 134/221 (60%), Gaps = 5/221 (2%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           ++L  GGEL DRI+ K    YTE+DA+ ++ Q+L      H  G+VHRD+KPEN L+ S 
Sbjct: 95  MQLVSGGELFDRIVEK--GFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSL 152
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILL 161
            EDS +  +DFGLS    PG       G+  YVAPEVL +K   ++ D WSIGVI YILL
Sbjct: 153 DEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 212
Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 221
           CG  PF+D+ +  +F+++L+ + +F    W  IS+SAKDF++ L+ KDP  R T  QAL 
Sbjct: 213 CGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ 272
Query: 222 HPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALA 262
           HPW+  G  A +  I  SV   +++    S+ KQ A  A A
Sbjct: 273 HPWIA-GDTALDKNIHQSVSEQIKKNFAKSKWKQ-AFNATA 311

>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat Length = 332

Iteration: 1
 Score =  176 bits (445), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 97/221 (43%), Positives = 134/221 (60%), Gaps = 5/221 (2%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           ++L  GGEL DRI+ K    YTE+DA+ ++ Q+L      H  G+VHRD+KPEN L+ S 
Sbjct: 95  MQLVSGGELFDRIVEK--GFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSL 152
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILL 161
            EDS +  +DFGLS    PG       G+  YVAPEVL +K   ++ D WSIGVI YILL
Sbjct: 153 DEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 212
Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 221
           CG  PF+D+ +  +F+++L+ + +F    W  IS+SAKDF++ L+ KDP  R T  QAL 
Sbjct: 213 CGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ 272
Query: 222 HPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALA 262
           HPW+  G  A +  I  SV   +++    S+ KQ A  A A
Sbjct: 273 HPWI-AGDTALDKNIHQSVSEQIKKNFAKSKWKQ-AFNATA 311

>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase 1d Length = 334

Iteration: 1
 Score =  174 bits (442), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 96/221 (43%), Positives = 132/221 (59%), Gaps = 5/221 (2%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           ++L  GGEL DRI+ K    YTEKDA+ ++RQ+L      H  G+VHRD+KPEN L+ S 
Sbjct: 99  MQLVSGGELFDRIVEK--GFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENLLYYSQ 156
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILL 161
            E+S +  +DFGLS     G       G+  YVAPEVL +K   ++ D WSIGVI YILL
Sbjct: 157 DEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 216
Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 221
           CG  PF+D+ +  +F+++L+ + +F    W  IS+SAKDF++ L+ KDP  R T  QA  
Sbjct: 217 CGYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAAR 276
Query: 222 HPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALA 262
           HPW+  G  A    I  SV   +R+    S+ +Q A  A A
Sbjct: 277 HPWI-AGDTALNKNIHESVSAQIRKNFAKSKWRQ-AFNATA 315

>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase I 1-293 In Complex With Atp Length = 293

Iteration: 1
 Score =  174 bits (441), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 88/191 (46%), Positives = 121/191 (63%), Gaps = 5/191 (2%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           ++L  GGEL DRI+ K    YTE+DA+ ++ Q+L      H  G+VHRD+KPEN L+ S 
Sbjct: 95  MQLVSGGELFDRIVEK--GFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSL 152
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILL 161
            EDS +  +DFGLS    PG       G+  YVAPEVL +K   ++ D WSIGVI YILL
Sbjct: 153 DEDSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILL 212
Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 221
           CG  PF+D+ +  +F+++L+ + +F    W  IS+SAKDF++ L+ KDP  R T  QAL 
Sbjct: 213 CGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQ 272
Query: 222 HPWVREGGDAS 232
           HPW+   GD +
Sbjct: 273 HPWI--AGDTA 281

>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino( Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6- Difluoro-Phenyl)-Amide) Length = 349

Iteration: 1
 Score =  173 bits (438), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 99/237 (41%), Positives = 142/237 (59%), Gaps = 12/237 (5%)
Query: 30  PMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH 89
           P EI L L       L  GGEL DRI+ K    Y+E+DAA  V+Q+L   A  H +G+VH
Sbjct: 120 PTEISLVLE------LVTGGELFDRIVEK--GYYSERDAADAVKQILEAVAYLHENGIVH 171
Query: 90  RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPES 148
           RD+KPEN L+ +   D+ LK  DFGLS  ++     + + G+  Y APE+L+  + GPE 
Sbjct: 172 RDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEV 231
Query: 149 DVWSIGVITYILLCGRRPFWDKTEDG-IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 207
           D+WS+G+ITYILLCG  PF+D+  D  +F+ +L  +  F    W  +S +AKD V+KL+V
Sbjct: 232 DMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIV 291
Query: 208 KDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALAST 264
            DP+ RLT  QAL HPWV  G  A+ + +D +    +++F    +LK      +AS+
Sbjct: 292 LDPKKRLTTFQALQHPWV-TGKAANFVHMD-TAQKKLQEFNARRKLKAAVKAVVASS 346

>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein Kinase I G Length = 304

Iteration: 1
 Score =  172 bits (437), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 88/184 (47%), Positives = 120/184 (65%), Gaps = 4/184 (2%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           ++L  GGEL DRIL +    YTEKDA++V++Q+L      H +G+VHRD+KPEN L+ + 
Sbjct: 85  MQLVSGGELFDRILER--GVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTP 142
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILL 161
           +E+S +  TDFGLS   + G       G+  YVAPEVL +K   ++ D WSIGVITYILL
Sbjct: 143 EENSKIMITDFGLSKMEQNGI-MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILL 201
Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 221
           CG  PF+++TE  +F+++     +F    W  IS SAKDF+  LL KDP  R T  +ALS
Sbjct: 202 CGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALS 261
Query: 222 HPWV 225
           HPW+
Sbjct: 262 HPWI 265

>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From Toxoplasma Gondii, 541.m00134, Kinase Domain Length = 287

Iteration: 1
 Score =  169 bits (427), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 80/178 (44%), Positives = 116/178 (65%), Gaps = 2/178 (1%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGEL D I+ ++  +++E DAAV+++Q+L      H H +VHRD+KPEN L +S   D+ 
Sbjct: 105 GGELFDEIILRQ--KFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKPENLLLESKSRDAL 162
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPF 167
           +K  DFGLS   + G K ++ +G+AYY+APEVL++K   + DVWS GVI YILLCG  PF
Sbjct: 163 IKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVLRKKYDEKCDVWSCGVILYILLCGYPPF 222
Query: 168 WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
             +T+  I K V + K  F    W  +S+ AK  VK +L  +P  R++A +AL+HPW+
Sbjct: 223 GGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWI 280

>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium Parvum Calcium Dependent Protein Kinase In Complex With 3- Mb-Pp1 Length = 287

Iteration: 1
 Score =  169 bits (427), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 82/183 (44%), Positives = 113/183 (61%), Gaps = 2/183 (1%)
Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L  GGEL D I+ +K  R++E DAA +++Q+       H H +VHRD+KPEN L +S ++
Sbjct: 102 LYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEK 159
Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGR 164
           D  +K  DFGLS   +   K +D +G+AYY+APEVL+     + DVWS GVI YILL G 
Sbjct: 160 DCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGT 219
Query: 165 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 224
            PF+ K E  I K V   K  F    W +IS+ AKD ++K+L   P  R+TA Q L HPW
Sbjct: 220 PPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPW 279
Query: 225 VRE 227
           +++
Sbjct: 280 IQK 282

>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent Protein Kinase Cgd3_920 From Cryptosporidium Parvum Length = 286

Iteration: 1
 Score =  168 bits (426), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 82/183 (44%), Positives = 113/183 (61%), Gaps = 2/183 (1%)
Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L  GGEL D I+ +K  R++E DAA +++Q+       H H +VHRD+KPEN L +S ++
Sbjct: 102 LYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEK 159
Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGR 164
           D  +K  DFGLS   +   K +D +G+AYY+APEVL+     + DVWS GVI YILL G 
Sbjct: 160 DCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGT 219
Query: 165 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 224
            PF+ K E  I K V   K  F    W +IS+ AKD ++K+L   P  R+TA Q L HPW
Sbjct: 220 PPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPW 279
Query: 225 VRE 227
           +++
Sbjct: 280 IQK 282

>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 Length = 294

Iteration: 1
 Score =  163 bits (412), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 79/182 (43%), Positives = 112/182 (61%), Gaps = 2/182 (1%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + LC GGEL +R++ K+  R  E DAA +++ +L   A CH   + HRD+KPENFLF + 
Sbjct: 102 MELCTGGELFERVVHKRVFR--ESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTD 159
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 162
             DS LK  DFGL+   KPGK  +  VG+ YYV+P+VL+   GPE D WS GV+ Y+LLC
Sbjct: 160 SPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLC 219
Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           G  PF   T+  +  ++      F  K W ++S  A+  +++LL K P+ R+T+ QAL H
Sbjct: 220 GYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 279
Query: 223 PW 224
            W
Sbjct: 280 EW 281

>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium Dependent Protein Kinase Cgd7_1840 In Presence Of Indirubin E804 Length = 277

Iteration: 1
 Score =  162 bits (411), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 79/182 (43%), Positives = 112/182 (61%), Gaps = 2/182 (1%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + LC GGEL +R++ K+  R  E DAA +++ +L   A CH   + HRD+KPENFLF + 
Sbjct: 85  MELCTGGELFERVVHKRVFR--ESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTD 142
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 162
             DS LK  DFGL+   KPGK  +  VG+ YYV+P+VL+   GPE D WS GV+ Y+LLC
Sbjct: 143 SPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLC 202
Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           G  PF   T+  +  ++      F  K W ++S  A+  +++LL K P+ R+T+ QAL H
Sbjct: 203 GYPPFSAPTDXEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEH 262
Query: 223 PW 224
            W
Sbjct: 263 EW 264

>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence Of 3brb-Pp1 Length = 298

Iteration: 1
 Score =  159 bits (402), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 79/179 (44%), Positives = 112/179 (62%), Gaps = 2/179 (1%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGEL D I+++K  R++E DAA ++RQ+L      H + +VHRD+KPEN L +S  +D++
Sbjct: 116 GGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDAN 173
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPF 167
           ++  DFGLS   +  KK +D +G+AYY+APEVL      + DVWS GVI YILL G  PF
Sbjct: 174 IRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPF 233
Query: 168 WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 226
               E  I K+V + K  F    W  +S SAKD ++K+L   P  R++A  AL H W++
Sbjct: 234 NGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQ 292

>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 327

Iteration: 1
 Score =  150 bits (380), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 132/222 (59%), Gaps = 4/222 (1%)
Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L  GGEL + I+A++   Y+E DA+  ++Q+L     CHL+G+VHRD+KPEN L  S  +
Sbjct: 84  LVTGGELFEDIVARE--YYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSK 141
Query: 105 DSSLKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC 162
            +++K  DFGL+  ++  ++ +    G+  Y++PEVL++   G   D+W+ GVI YILL 
Sbjct: 142 GAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLV 201
Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           G  PFWD+ +  +++++     DF    W +++  AKD + K+L  +P  R+TA++AL H
Sbjct: 202 GYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKH 261
Query: 223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALAST 264
           PW+ +    + +      ++ +++F    +LK   L  + +T
Sbjct: 262 PWICQRSTVASMMHRQETVDCLKKFNARRKLKGAILTTMLAT 303

>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent Protein Kinase Ii Delta Isoform 1, Camkd Length = 301

Iteration: 1
 Score =  149 bits (375), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 130/219 (59%), Gaps = 4/219 (1%)
Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L  GGEL + I+A++   Y+E DA+  ++Q+L     CHL+G+VHRD+KPEN L  S  +
Sbjct: 84  LVTGGELFEDIVARE--YYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSK 141
Query: 105 DSSLKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC 162
            +++K  DFGL+  ++  ++ +    G+  Y++PEVL++   G   D+W+ GVI YILL 
Sbjct: 142 GAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLV 201
Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           G  PFWD+ +  +++++     DF    W +++  AKD + K+L  +P  R+TA++AL H
Sbjct: 202 GYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRITASEALKH 261
Query: 223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRAL 261
           PW+ +    + +      ++ +++F    +LK   L  +
Sbjct: 262 PWICQRSTVASMMHRQETVDCLKKFNARRKLKGAILTTM 300

>pdb|3SOA|A Chain A, Full-Length Human Camkii Length = 444

Iteration: 1
 Score =  145 bits (367), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 79/248 (31%), Positives = 139/248 (56%), Gaps = 10/248 (4%)
Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L  GGEL + I+A++   Y+E DA+  ++Q+L     CH  G+VHR++KPEN L  S  +
Sbjct: 91  LVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLK 148
Query: 105 DSSLKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC 162
            +++K  DFGL+  ++  ++ +    G+  Y++PEVL++   G   D+W+ GVI YILL 
Sbjct: 149 GAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLV 208
Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           G  PFWD+ +  +++++     DF    W +++  AKD + K+L  +P  R+TAA+AL H
Sbjct: 209 GYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268
Query: 223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALAST----LDDEELADLRDQFD 278
           PW+      +        ++ +++F    +LK   L  + +T    +  +E+  + +Q  
Sbjct: 269 PWISHRSTVASCMHRQETVDCLKKFNARRKLKGAILTVMLATRNFSVRKQEIIKVTEQL- 327
Query: 279 AIDVDKNG 286
            I+   NG
Sbjct: 328 -IEAISNG 334

>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin E804 Length = 313

Iteration: 1
 Score =  145 bits (365), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 124/212 (58%), Gaps = 4/212 (1%)
Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L  GGEL + I+A++   Y+E DA+  ++Q+L     CH  G+VHRD+KPEN L  S  +
Sbjct: 102 LVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKLK 159
Query: 105 DSSLKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC 162
            +++K  DFGL+  ++  ++ +    G+  Y++PEVL++   G   D+W+ GVI YILL 
Sbjct: 160 GAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLV 219
Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           G  PFWD+ +  +++++     DF    W +++  AKD + K+L  +P  R+TAA+AL H
Sbjct: 220 GYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH 279
Query: 223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLK 254
           PW+      +        ++ +++F    +LK
Sbjct: 280 PWISHRSTVASCMHRQETVDCLKKFNARRKLK 311

>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent Protein Kinase Iib Isoform 1 (camk2b) Length = 295

Iteration: 1
 Score =  144 bits (362), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 71/212 (33%), Positives = 126/212 (59%), Gaps = 4/212 (1%)
Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L  GGEL + I+A++   Y+E DA+  ++Q+L     CH  G+VHRD+KPEN L  S  +
Sbjct: 84  LVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENLLLASKCK 141
Query: 105 DSSLKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC 162
            +++K  DFGL+  ++  ++ +    G+  Y++PEVL++++ G   D+W+ GVI YILL 
Sbjct: 142 GAAVKLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLV 201
Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           G  PFWD+ +  +++++     DF    W +++  AK+ + ++L  +P  R+TA +AL H
Sbjct: 202 GYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITAHEALKH 261
Query: 223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLK 254
           PWV +    + +      +  +++F    +LK
Sbjct: 262 PWVCQRSTVASMMHRQETVECLKKFNARRKLK 293

>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated Protein Kinase-Activated Protein Kinase 3 (Mk3)-Inhibitor Complex Length = 336

Iteration: 1
 Score =  140 bits (353), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 112/212 (52%), Gaps = 15/212 (7%)
Query: 38  RKLRRIRLC-EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 96
           R L  I  C EGGEL  RI  + D  +TE++AA ++R +       H H + HRD+KPEN
Sbjct: 99  RCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPEN 158
Query: 97  FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPE-----SDVW 151
            L+ S ++D+ LK TDFG +         Q    + YYVAPEVL    GPE      D+W
Sbjct: 159 LLYTSKEKDAVLKLTDFGFAKETTQ-NALQTPCYTPYYVAPEVL----GPEKYDKSCDMW 213
Query: 152 SIGVITYILLCGRRPFWDKTED----GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 207
           S+GVI YILLCG  PF+  T      G+ + +   +  F    W  +S  AK  ++ LL 
Sbjct: 214 SLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLK 273
Query: 208 KDPRARLTAAQALSHPWVREGGDASEIPIDIS 239
            DP  RLT  Q ++HPW+ +     + P+  +
Sbjct: 274 TDPTERLTITQFMNHPWINQSMVVPQTPLHTA 305

>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent Protein Kinase Ii Gamma Length = 336

Iteration: 1
 Score =  140 bits (353), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 124/219 (56%), Gaps = 4/219 (1%)
Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L  GGEL + I+A++   Y+E DA+  + Q+L      H H +VHRD+KPEN L  S  +
Sbjct: 111 LVTGGELFEDIVARE--YYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCK 168
Query: 105 DSSLKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC 162
            +++K  DFGL+  ++  ++ +    G+  Y++PEVL++   G   D+W+ GVI YILL 
Sbjct: 169 GAAVKLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLV 228
Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           G  PFWD+ +  +++++     DF    W +++  AK+ + ++L  +P  R+TA QAL H
Sbjct: 229 GYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITADQALKH 288
Query: 223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRAL 261
           PWV +    + +      +  +R+F    +LK   L  +
Sbjct: 289 PWVCQRSTVASMMHRQETVECLRKFNARRKLKGAILTTM 327

>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b Length = 317

Iteration: 1
 Score =  140 bits (353), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 76/202 (37%), Positives = 108/202 (53%), Gaps = 14/202 (6%)
Query: 47  EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 106
           EGGEL  RI  + D  +TE++AA ++R +       H H + HRD+KPEN L+ S ++D+
Sbjct: 90  EGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDA 149
Query: 107 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILL 161
            LK TDFG +         Q    + YYVAPEVL    GPE      D+WS+GVI YILL
Sbjct: 150 VLKLTDFGFAKETTQ-NALQTPCYTPYYVAPEVL----GPEKYDKSCDMWSLGVIMYILL 204
Query: 162 CGRRPFWDKTED----GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
           CG  PF+  T      G+ + +   +  F    W  +S  AK  ++ LL  DP  RLT  
Sbjct: 205 CGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTIT 264
Query: 218 QALSHPWVREGGDASEIPIDIS 239
           Q ++HPW+ +     + P+  +
Sbjct: 265 QFMNHPWINQSMVVPQTPLHTA 286

>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of CalciumCALMODULIN ACTIVATED KINASE II Length = 362

Iteration: 1
 Score =  140 bits (352), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/184 (36%), Positives = 111/184 (60%), Gaps = 7/184 (3%)
Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L  GGEL + I+A++   Y+E DA+  ++Q+L   A CH +G+VHR++KPEN L  S  +
Sbjct: 109 LVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAK 166
Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES---DVWSIGVITYILL 161
            +++K  DFGL+  +   + +    G+  Y++PEVLK+   P S   D+W+ GVI YILL
Sbjct: 167 GAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKD--PYSKPVDIWACGVILYILL 224
Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 221
            G  PFWD+ +  ++ ++     D+    W +++  AK  +  +L  +P+ R+TA QAL 
Sbjct: 225 VGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALK 284
Query: 222 HPWV 225
            PW+
Sbjct: 285 VPWI 288

>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex Length = 269

Iteration: 1
 Score =  139 bits (350), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 68/183 (37%), Positives = 111/183 (60%), Gaps = 5/183 (2%)
Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L  GGEL + I+A++   Y+E DA+  ++Q+L   A CH +G+VHR++KPEN L  S  +
Sbjct: 86  LVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAK 143
Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 162
            +++K  DFGL+  +   + +    G+  Y++PEVLK+   S P  D+W+ GVI YILL 
Sbjct: 144 GAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKP-VDIWACGVILYILLV 202
Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           G  PFWD+ +  ++ ++     D+    W +++  AK  +  +L  +P+ R+TA QAL  
Sbjct: 203 GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262
Query: 223 PWV 225
           PW+
Sbjct: 263 PWI 265

>pdb|3KK8|A Chain A, Camkii Substrate Complex A Length = 284

Iteration: 1
 Score =  139 bits (350), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 68/183 (37%), Positives = 111/183 (60%), Gaps = 5/183 (2%)
Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L  GGEL + I+A++   Y+E DA+  ++Q+L   A CH +G+VHR++KPEN L  S  +
Sbjct: 86  LVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAK 143
Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 162
            +++K  DFGL+  +   + +    G+  Y++PEVLK+   S P  D+W+ GVI YILL 
Sbjct: 144 GAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKP-VDIWACGVILYILLV 202
Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           G  PFWD+ +  ++ ++     D+    W +++  AK  +  +L  +P+ R+TA QAL  
Sbjct: 203 GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262
Query: 223 PWV 225
           PW+
Sbjct: 263 PWI 265

>pdb|3KK9|A Chain A, Camkii Substrate Complex B Length = 282

Iteration: 1
 Score =  139 bits (350), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 68/183 (37%), Positives = 111/183 (60%), Gaps = 5/183 (2%)
Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L  GGEL + I+A++   Y+E DA+  ++Q+L   A CH +G+VHR++KPEN L  S  +
Sbjct: 85  LVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAK 142
Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC 162
            +++K  DFGL+  +   + +    G+  Y++PEVLK+   S P  D+W+ GVI YILL 
Sbjct: 143 GAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKP-VDIWACGVILYILLV 201
Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           G  PFWD+ +  ++ ++     D+    W +++  AK  +  +L  +P+ R+TA QAL  
Sbjct: 202 GYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 261
Query: 223 PWV 225
           PW+
Sbjct: 262 PWI 264

>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase 3 (Dapk3) In Complex With A Beta-Carboline Ligand Length = 283

Iteration: 1
 Score =  135 bits (341), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 74/186 (39%), Positives = 112/186 (60%), Gaps = 4/186 (2%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKS 101
           + L  GGEL D  LA+K+S  TE +A   ++Q+L      H   + H D+KPEN  L   
Sbjct: 87  LELVSGGELFD-FLAEKES-LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDK 144
Query: 102 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYIL 160
              +  +K  DFG++  I+ G +F++I G+  +VAPE++  +  G E+D+WSIGVITYIL
Sbjct: 145 NVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 204
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           L G  PF  +T+      +     DF  + + + S  AKDF+++LLVKDP+ R+T AQ+L
Sbjct: 205 LSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSL 264
Query: 221 SHPWVR 226
            H W++
Sbjct: 265 EHSWIK 270

>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv1531 Length = 322

Iteration: 1
 Score =  135 bits (339), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 73/190 (38%), Positives = 105/190 (55%), Gaps = 7/190 (3%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + L EGGEL D+++  K  R  E    +   QML      H +G++HRD+KPEN L  S 
Sbjct: 93  LELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ 150
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITY 158
           +ED  +K TDFG S  +      + + G+  Y+APEVL            D WS+GVI +
Sbjct: 151 EEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210
Query: 159 ILLCGRRPFWD-KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
           I L G  PF + +T+  +  ++   K +F  + W  +S  A D VKKLLV DP+AR T  
Sbjct: 211 ICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTE 270
Query: 218 QALSHPWVRE 227
           +AL HPW+++
Sbjct: 271 EALRHPWLQD 280

>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In Complex With Inhibitor Pv1533 Length = 322

Iteration: 1
 Score =  135 bits (339), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 73/190 (38%), Positives = 105/190 (55%), Gaps = 7/190 (3%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + L EGGEL D+++  K  R  E    +   QML      H +G++HRD+KPEN L  S 
Sbjct: 92  LELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ 149
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITY 158
           +ED  +K TDFG S  +      + + G+  Y+APEVL            D WS+GVI +
Sbjct: 150 EEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 209
Query: 159 ILLCGRRPFWD-KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
           I L G  PF + +T+  +  ++   K +F  + W  +S  A D VKKLLV DP+AR T  
Sbjct: 210 ICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTE 269
Query: 218 QALSHPWVRE 227
           +AL HPW+++
Sbjct: 270 EALRHPWLQD 279

>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A Specific Inhibitor Length = 323

Iteration: 1
 Score =  135 bits (339), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 73/190 (38%), Positives = 105/190 (55%), Gaps = 7/190 (3%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + L EGGEL D+++  K  R  E    +   QML      H +G++HRD+KPEN L  S 
Sbjct: 93  LELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ 150
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITY 158
           +ED  +K TDFG S  +      + + G+  Y+APEVL            D WS+GVI +
Sbjct: 151 EEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210
Query: 159 ILLCGRRPFWD-KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
           I L G  PF + +T+  +  ++   K +F  + W  +S  A D VKKLLV DP+AR T  
Sbjct: 211 ICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTE 270
Query: 218 QALSHPWVRE 227
           +AL HPW+++
Sbjct: 271 EALRHPWLQD 280

>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp Length = 329

Iteration: 1
 Score =  135 bits (339), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 73/190 (38%), Positives = 105/190 (55%), Gaps = 7/190 (3%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + L EGGEL D+++  K  R  E    +   QML      H +G++HRD+KPEN L  S 
Sbjct: 99  LELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ 156
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITY 158
           +ED  +K TDFG S  +      + + G+  Y+APEVL            D WS+GVI +
Sbjct: 157 EEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 216
Query: 159 ILLCGRRPFWD-KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
           I L G  PF + +T+  +  ++   K +F  + W  +S  A D VKKLLV DP+AR T  
Sbjct: 217 ICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTE 276
Query: 218 QALSHPWVRE 227
           +AL HPW+++
Sbjct: 277 EALRHPWLQD 286

>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With Inhibitor Pv976 Length = 323

Iteration: 1
 Score =  134 bits (338), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 73/190 (38%), Positives = 105/190 (55%), Gaps = 7/190 (3%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + L EGGEL D+++  K  R  E    +   QML      H +G++HRD+KPEN L  S 
Sbjct: 93  LELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ 150
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITY 158
           +ED  +K TDFG S  +      + + G+  Y+APEVL            D WS+GVI +
Sbjct: 151 EEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210
Query: 159 ILLCGRRPFWD-KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
           I L G  PF + +T+  +  ++   K +F  + W  +S  A D VKKLLV DP+AR T  
Sbjct: 211 ICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTE 270
Query: 218 QALSHPWVRE 227
           +AL HPW+++
Sbjct: 271 EALRHPWLQD 280

>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 443

Iteration: 1
 Score =  134 bits (337), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 73/190 (38%), Positives = 105/190 (55%), Gaps = 7/190 (3%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + L EGGEL D+++  K  R  E    +   QML      H +G++HRD+KPEN L  S 
Sbjct: 232 LELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ 289
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITY 158
           +ED  +K TDFG S  +      + + G+  Y+APEVL            D WS+GVI +
Sbjct: 290 EEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 349
Query: 159 ILLCGRRPFWD-KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
           I L G  PF + +T+  +  ++   K +F  + W  +S  A D VKKLLV DP+AR T  
Sbjct: 350 ICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTE 409
Query: 218 QALSHPWVRE 227
           +AL HPW+++
Sbjct: 410 EALRHPWLQD 419

>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 3 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score =  134 bits (337), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 127/228 (55%), Gaps = 7/228 (3%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKS 101
           + L  GGEL D  LA+K+S  +E++A   ++Q+L      H   + H D+KPEN  L   
Sbjct: 94  LELVSGGELFD-FLAQKES-LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDK 151
Query: 102 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYIL 160
                 +K  DFGL+  I+ G +F++I G+  +VAPE++  +  G E+D+WSIGVITYIL
Sbjct: 152 NIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 211
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           L G  PF   T+      +     DF  + +   S  AKDF++KLLVK+ R RLT  +AL
Sbjct: 212 LSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEAL 271
Query: 221 SHPWVREGGDASEIPIDISVLN--NMR-QFVKYSRLKQFALRALASTL 265
            HPW+    +   +    SV+N  N R Q+V+      F++ +L + L
Sbjct: 272 RHPWITPVDNQQAMVRRESVVNLENFRKQYVRRRSKLAFSIVSLCNHL 319

>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form With 8 Monomers In The Asymmetric Unit Length = 321

Iteration: 1
 Score =  134 bits (336), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 127/228 (55%), Gaps = 7/228 (3%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKS 101
           + L  GGEL D  LA+K+S  +E++A   ++Q+L      H   + H D+KPEN  L   
Sbjct: 94  LELVSGGELFD-FLAQKES-LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDK 151
Query: 102 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYIL 160
                 +K  DFGL+  I+ G +F++I G+  +VAPE++  +  G E+D+WSIGVITYIL
Sbjct: 152 NIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 211
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           L G  PF   T+      +     DF  + +   S  AKDF++KLLVK+ R RLT  +AL
Sbjct: 212 LSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEAL 271
Query: 221 SHPWVREGGDASEIPIDISVLN--NMR-QFVKYSRLKQFALRALASTL 265
            HPW+    +   +    SV+N  N R Q+V+      F++ +L + L
Sbjct: 272 RHPWITPVDNQQAMVRRESVVNLENFRKQYVRRRSKLAFSIVSLCNHL 319

>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage Checkpoint Kinase Length = 419

Iteration: 1
 Score =  134 bits (336), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 73/190 (38%), Positives = 105/190 (55%), Gaps = 7/190 (3%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + L EGGEL D+++  K  R  E    +   QML      H +G++HRD+KPEN L  S 
Sbjct: 218 LELMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQ 275
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITY 158
           +ED  +K TDFG S  +      + + G+  Y+APEVL            D WS+GVI +
Sbjct: 276 EEDCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 335
Query: 159 ILLCGRRPFWD-KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
           I L G  PF + +T+  +  ++   K +F  + W  +S  A D VKKLLV DP+AR T  
Sbjct: 336 ICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTE 395
Query: 218 QALSHPWVRE 227
           +AL HPW+++
Sbjct: 396 EALRHPWLQD 405

>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A Tetracyclic Pyridone Inhibitor (pyridone 6) Length = 304

Iteration: 1
 Score =  134 bits (336), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 73/186 (39%), Positives = 111/186 (59%), Gaps = 4/186 (2%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKS 101
           + L  GGEL D  LA+K+S  TE +A   ++Q+L      H   + H D+KPEN  L   
Sbjct: 108 LELVSGGELFD-FLAEKES-LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDK 165
Query: 102 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYIL 160
              +  +K  DFG++  I+ G +F++I G+  +VAPE++  +  G E+D+WSIGVITYIL
Sbjct: 166 NVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 225
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           L G  PF  +T+      +     DF  + + + S  AKDF+++LLVKDP+ R+  AQ+L
Sbjct: 226 LSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSL 285
Query: 221 SHPWVR 226
            H W++
Sbjct: 286 EHSWIK 291

>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At Thr265 Length = 278

Iteration: 1
 Score =  133 bits (335), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 73/186 (39%), Positives = 111/186 (59%), Gaps = 4/186 (2%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKS 101
           + L  GGEL D  LA+K+S  TE +A   ++Q+L      H   + H D+KPEN  L   
Sbjct: 94  LELVSGGELFD-FLAEKES-LTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDK 151
Query: 102 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYIL 160
              +  +K  DFG++  I+ G +F++I G+  +VAPE++  +  G E+D+WSIGVITYIL
Sbjct: 152 NVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 211
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           L G  PF  +T+      +     DF  + + + S  AKDF+++LLVKDP+ R+  AQ+L
Sbjct: 212 LSGASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSL 271
Query: 221 SHPWVR 226
            H W++
Sbjct: 272 EHSWIK 277

>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma Gondii, Tgme49_018720 Length = 285

Iteration: 1
 Score =  133 bits (335), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 67/188 (35%), Positives = 108/188 (57%), Gaps = 3/188 (1%)
Query: 43  IRLCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK 100
           +  CEGGELL+RI++   +    +E   A +++QM+   A  H   +VH+D+KPEN LF+
Sbjct: 99  METCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQ 158
Query: 101 SAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYIL 160
                S +K  DFGL++  K  +   +  G+A Y+APEV KR    + D+WS GV+ Y L
Sbjct: 159 DTSPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFL 218
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           L G  PF   + + + ++    +P++  +  P ++  A D +K++L KDP  R +AAQ L
Sbjct: 219 LTGCLPFTGTSLEEVQQKATYKEPNYAVECRP-LTPQAVDLLKQMLTKDPERRPSAAQVL 277
Query: 221 SHPWVREG 228
            H W ++ 
Sbjct: 278 HHEWFKQA 285

>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The Autoinhibited Conformation Of A Human Death-associated Protein Kinase Length = 321

Iteration: 1
 Score =  133 bits (335), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 127/228 (55%), Gaps = 7/228 (3%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKS 101
           + L  GGEL D  LA+K+S  +E++A   ++Q+L      H   + H D+KPEN  L   
Sbjct: 94  LELVSGGELFD-FLAQKES-LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDK 151
Query: 102 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYIL 160
                 +K  DFGL+  I+ G +F++I G+  +VAPE++  +  G E+D+WSIGVITYIL
Sbjct: 152 NIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 211
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           L G  PF   T+      +     DF  + +   S  AKDF++KLLVK+ R RLT  +AL
Sbjct: 212 LSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEAL 271
Query: 221 SHPWVREGGDASEIPIDISVLN--NMR-QFVKYSRLKQFALRALASTL 265
            HPW+    +   +    SV+N  N R Q+V+      F++ +L + L
Sbjct: 272 RHPWITPVDNQQAMVRRESVVNLENFRKQYVRRRWKLSFSIVSLCNHL 319

>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40 Length = 321

Iteration: 1
 Score =  133 bits (334), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 127/228 (55%), Gaps = 7/228 (3%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKS 101
           + L  GGEL D  LA+K+S  +E++A   ++Q+L      H   + H D+KPEN  L   
Sbjct: 94  LELVSGGELFD-FLAQKES-LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDK 151
Query: 102 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYIL 160
                 +K  DFGL+  I+ G +F++I G+  +VAPE++  +  G E+D+WSIGVITYIL
Sbjct: 152 NIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 211
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           L G  PF   T+      +     DF  + +   S  AKDF++KLLVK+ R RLT  +AL
Sbjct: 212 LSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEAL 271
Query: 221 SHPWVREGGDASEIPIDISVLN--NMR-QFVKYSRLKQFALRALASTL 265
            HPW+    +   +    SV+N  N R Q+V+      F++ +L + L
Sbjct: 272 RHPWITPVDNQQAMVRRESVVNLENFRKQYVRRRWKLDFSIVSLCNHL 319

>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1 Kinase Length = 288

Iteration: 1
 Score =  132 bits (333), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 75/185 (40%), Positives = 108/185 (58%), Gaps = 4/185 (2%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKS 101
           + L  GGEL D  LA+K+S  +E++A   ++Q+L      H   + H D+KPEN  L   
Sbjct: 94  LELVSGGELFD-FLAQKES-LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDK 151
Query: 102 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYIL 160
                 +K  DFGL+  I+ G +F++I G+  +VAPE++  +  G E+D+WSIGVITYIL
Sbjct: 152 NIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 211
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           L G  PF   T+      +     DF  + +   S  AKDF++KLLVK+ R RLT  +AL
Sbjct: 212 LSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEAL 271
Query: 221 SHPWV 225
            HPW+
Sbjct: 272 RHPWI 276

>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302 Length = 302

Iteration: 1
 Score =  132 bits (333), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 79/211 (37%), Positives = 119/211 (56%), Gaps = 5/211 (2%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKS 101
           + L  GGEL D  LA+K+S  TE++A   ++Q+L      H   + H D+KPEN  L   
Sbjct: 93  LELVAGGELFD-FLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 150
Query: 102 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYIL 160
                 +K  DFGL+  I  G +F++I G+  +VAPE++  +  G E+D+WSIGVITYIL
Sbjct: 151 NVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 210
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           L G  PF   T+      V     +F  + + + S  AKDF+++LLVKDP+ R+T   +L
Sbjct: 211 LSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
Query: 221 SHPWVREGGDASEIPIDISVLNNMRQFVKYS 251
            HPW++       +    S + NM +F K++
Sbjct: 271 QHPWIKPKDTQQALSRKASAV-NMEKFKKFA 300

>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2 Length = 361

Iteration: 1
 Score =  132 bits (332), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 75/185 (40%), Positives = 108/185 (58%), Gaps = 4/185 (2%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKS 101
           + L  GGEL D  LA+K+S  +E++A   ++Q+L      H   + H D+KPEN  L   
Sbjct: 94  LELVSGGELFD-FLAQKES-LSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDK 151
Query: 102 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYIL 160
                 +K  DFGL+  I+ G +F++I G+  +VAPE++  +  G E+D+WSIGVITYIL
Sbjct: 152 NIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 211
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           L G  PF   T+      +     DF  + +   S  AKDF++KLLVK+ R RLT  +AL
Sbjct: 212 LSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEAL 271
Query: 221 SHPWV 225
            HPW+
Sbjct: 272 RHPWI 276

>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native Length = 351

Iteration: 1
 Score =  131 bits (330), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 79/227 (34%), Positives = 130/227 (57%), Gaps = 17/227 (7%)
Query: 47  EGGELLDRILAKKDSR--YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           +G +L   I+ + D+   Y+E  A+  +RQ+L     CH + ++HRD+KPEN L  S + 
Sbjct: 109 DGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPENVLLASKEN 168
Query: 105 DSSLKATDFGL------SDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVIT 157
            + +K  DFG+      S  +  G+     VG+ +++APEV+KR+  G   DVW  GVI 
Sbjct: 169 SAPVKLGDFGVAIQLGESGLVAGGR-----VGTPHFMAPEVVKREPYGKPVDVWGCGVIL 223
Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
           +ILL G  PF+  T++ +F+ +++ K     + W  IS SAKD V+++L+ DP  R+T  
Sbjct: 224 FILLSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVY 282
Query: 218 QALSHPWVREGGDASEIPIDI-SVLNNMRQFVKYSRLKQFALRALAS 263
           +AL+HPW++E  D     I +   +  +R+F    +LK   L A++S
Sbjct: 283 EALNHPWLKE-RDRYAYKIHLPETVEQLRKFNARRKLKGAVLAAVSS 328

>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In Complex With A Ruthenium Octasporine Ligand (Osv) Length = 285

Iteration: 1
 Score =  131 bits (329), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 74/186 (39%), Positives = 109/186 (58%), Gaps = 4/186 (2%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKS 101
           + L  GGEL D  LA+K+S  TE++A   ++Q+L      H   + H D+KPEN  L   
Sbjct: 93  LELVAGGELFD-FLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 150
Query: 102 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYIL 160
                 +K  DFGL+  I  G +F++I G+  +VAPE++  +  G E+D+WSIGVITYIL
Sbjct: 151 NVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 210
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           L G  PF   T+      V     +F  + + + S  AKDF+++LLVKDP+ R+T   +L
Sbjct: 211 LSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
Query: 221 SHPWVR 226
            HPW++
Sbjct: 271 QHPWIK 276

>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In Complex With Small Molecular Inhibitors Length = 278

Iteration: 1
 Score =  131 bits (329), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 74/186 (39%), Positives = 109/186 (58%), Gaps = 4/186 (2%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKS 101
           + L  GGEL D  LA+K+S  TE++A   ++Q+L      H   + H D+KPEN  L   
Sbjct: 93  LELVAGGELFD-FLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 150
Query: 102 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYIL 160
                 +K  DFGL+  I  G +F++I G+  +VAPE++  +  G E+D+WSIGVITYIL
Sbjct: 151 NVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 210
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           L G  PF   T+      V     +F  + + + S  AKDF+++LLVKDP+ R+T   +L
Sbjct: 211 LSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
Query: 221 SHPWVR 226
            HPW++
Sbjct: 271 QHPWIK 276

>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant Length = 334

Iteration: 1
 Score =  131 bits (329), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 74/186 (39%), Positives = 109/186 (58%), Gaps = 4/186 (2%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKS 101
           + L  GGEL D  LA+K+S  TE++A   ++Q+L      H   + H D+KPEN  L   
Sbjct: 93  LELVAGGELFD-FLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 150
Query: 102 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYIL 160
                 +K  DFGL+  I  G +F++I G+  +VAPE++  +  G E+D+WSIGVITYIL
Sbjct: 151 NVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYIL 210
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           L G  PF   T+      V     +F  + + + S  AKDF+++LLVKDP+ R+T   +L
Sbjct: 211 LSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
Query: 221 SHPWVR 226
            HPW++
Sbjct: 271 QHPWIK 276

>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277 Length = 277

Iteration: 1
 Score =  131 bits (329), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 74/186 (39%), Positives = 109/186 (58%), Gaps = 4/186 (2%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKS 101
           + L  GGEL D  LA+K+S  TE++A   ++Q+L      H   + H D+KPEN  L   
Sbjct: 93  LELVAGGELFD-FLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 150
Query: 102 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYIL 160
                 +K  DFGL+  I  G +F++I G+  +VAPE++  +  G E+D+WSIGVITYIL
Sbjct: 151 NVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 210
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           L G  PF   T+      V     +F  + + + S  AKDF+++LLVKDP+ R+T   +L
Sbjct: 211 LSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
Query: 221 SHPWVR 226
            HPW++
Sbjct: 271 QHPWIK 276

>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304 Length = 326

Iteration: 1
 Score =  131 bits (329), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 74/186 (39%), Positives = 109/186 (58%), Gaps = 4/186 (2%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKS 101
           + L  GGEL D  LA+K+S  TE++A   ++Q+L      H   + H D+KPEN  L   
Sbjct: 93  LELVAGGELFD-FLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 150
Query: 102 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYIL 160
                 +K  DFGL+  I  G +F++I G+  +VAPE++  +  G E+D+WSIGVITYIL
Sbjct: 151 NVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 210
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           L G  PF   T+      V     +F  + + + S  AKDF+++LLVKDP+ R+T   +L
Sbjct: 211 LSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
Query: 221 SHPWVR 226
            HPW++
Sbjct: 271 QHPWIK 276

>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex Length = 334

Iteration: 1
 Score =  131 bits (329), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 74/186 (39%), Positives = 109/186 (58%), Gaps = 4/186 (2%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKS 101
           + L  GGEL D  LA+K+S  TE++A   ++Q+L      H   + H D+KPEN  L   
Sbjct: 93  LELVAGGELFD-FLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 150
Query: 102 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYIL 160
                 +K  DFGL+  I  G +F++I G+  +VAPE++  +  G E+D+WSIGVITYIL
Sbjct: 151 NVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 210
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           L G  PF   T+      V     +F  + + + S  AKDF+++LLVKDP+ R+T   +L
Sbjct: 211 LSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
Query: 221 SHPWVR 226
            HPW++
Sbjct: 271 QHPWIK 276

>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein Kinase Domain Length = 387

Iteration: 1
 Score =  131 bits (329), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 79/210 (37%), Positives = 119/210 (56%), Gaps = 7/210 (3%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +    GGEL DRI A +D + +E +    +RQ        H H +VH D+KPEN + ++ 
Sbjct: 127 LEFLSGGELFDRI-AAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET- 184
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILL 161
           K+ SS+K  DFGL+  + P +  +    +A + APE++ R+  G  +D+W+IGV+ Y+LL
Sbjct: 185 KKASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLL 244
Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 221
            G  PF  + +    + V R   +F    + S+S  AKDF+K LL K+PR RLT   AL 
Sbjct: 245 SGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALE 304
Query: 222 HPWVREGGDASEIP--IDISVLNNMRQFVK 249
           HPW++  GD S +   I  S  N +RQ +K
Sbjct: 305 HPWLK--GDHSNLTSRIPSSRYNKIRQKIK 332

>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312 Length = 312

Iteration: 1
 Score =  131 bits (329), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 74/186 (39%), Positives = 109/186 (58%), Gaps = 4/186 (2%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKS 101
           + L  GGEL D  LA+K+S  TE++A   ++Q+L      H   + H D+KPEN  L   
Sbjct: 93  LELVAGGELFD-FLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 150
Query: 102 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYIL 160
                 +K  DFGL+  I  G +F++I G+  +VAPE++  +  G E+D+WSIGVITYIL
Sbjct: 151 NVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 210
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           L G  PF   T+      V     +F  + + + S  AKDF+++LLVKDP+ R+T   +L
Sbjct: 211 LSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
Query: 221 SHPWVR 226
            HPW++
Sbjct: 271 QHPWIK 276

>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With Bound Inhibitor Fragment Length = 293

Iteration: 1
 Score =  130 bits (328), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 74/186 (39%), Positives = 109/186 (58%), Gaps = 4/186 (2%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKS 101
           + L  GGEL D  LA+K+S  TE++A   ++Q+L      H   + H D+KPEN  L   
Sbjct: 92  LELVAGGELFD-FLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 149
Query: 102 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYIL 160
                 +K  DFGL+  I  G +F++I G+  +VAPE++  +  G E+D+WSIGVITYIL
Sbjct: 150 NVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 209
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           L G  PF   T+      V     +F  + + + S  AKDF+++LLVKDP+ R+T   +L
Sbjct: 210 LSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 269
Query: 221 SHPWVR 226
            HPW++
Sbjct: 270 QHPWIK 275

>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase In Complex With Amppnp And Mg2+ Length = 295

Iteration: 1
 Score =  130 bits (328), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 74/186 (39%), Positives = 109/186 (58%), Gaps = 4/186 (2%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKS 101
           + L  GGEL D  LA+K+S  TE++A   ++Q+L      H   + H D+KPEN  L   
Sbjct: 93  LELVAGGELFD-FLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 150
Query: 102 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYIL 160
                 +K  DFGL+  I  G +F++I G+  +VAPE++  +  G E+D+WSIGVITYIL
Sbjct: 151 NVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 210
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           L G  PF   T+      V     +F  + + + S  AKDF+++LLVKDP+ R+T   +L
Sbjct: 211 LSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
Query: 221 SHPWVR 226
            HPW++
Sbjct: 271 QHPWIK 276

>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic Domain Of Death-Associated Protein Kinase With Atp Analogue And Mn. Length = 294

Iteration: 1
 Score =  130 bits (328), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 74/186 (39%), Positives = 109/186 (58%), Gaps = 4/186 (2%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKS 101
           + L  GGEL D  LA+K+S  TE++A   ++Q+L      H   + H D+KPEN  L   
Sbjct: 92  LELVAGGELFD-FLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 149
Query: 102 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYIL 160
                 +K  DFGL+  I  G +F++I G+  +VAPE++  +  G E+D+WSIGVITYIL
Sbjct: 150 NVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 209
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           L G  PF   T+      V     +F  + + + S  AKDF+++LLVKDP+ R+T   +L
Sbjct: 210 LSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 269
Query: 221 SHPWVR 226
            HPW++
Sbjct: 270 QHPWIK 275

>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp Length = 295

Iteration: 1
 Score =  130 bits (328), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 74/186 (39%), Positives = 109/186 (58%), Gaps = 4/186 (2%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKS 101
           + L  GGEL D  LA+K+S  TE++A   ++Q+L      H   + H D+KPEN  L   
Sbjct: 93  LELVAGGELFD-FLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 150
Query: 102 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYIL 160
                 +K  DFGL+  I  G +F++I G+  +VAPE++  +  G E+D+WSIGVITYIL
Sbjct: 151 NVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 210
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           L G  PF   T+      V     +F  + + + S  AKDF+++LLVKDP+ R+T   +L
Sbjct: 211 LSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
Query: 221 SHPWVR 226
            HPW++
Sbjct: 271 QHPWIK 276

>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The Death Associated Protein Kinase Catalytic Domain With Amppnp Length = 295

Iteration: 1
 Score =  130 bits (328), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 74/186 (39%), Positives = 109/186 (58%), Gaps = 4/186 (2%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKS 101
           + L  GGEL D  LA+K+S  TE++A   ++Q+L      H   + H D+KPEN  L   
Sbjct: 93  LELVAGGELFD-FLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDR 150
Query: 102 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYIL 160
                 +K  DFGL+  I  G +F++I G+  +VAPE++  +  G E+D+WSIGVITYIL
Sbjct: 151 NVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYIL 210
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           L G  PF   T+      V     +F  + + + S  AKDF+++LLVKDP+ R+T   +L
Sbjct: 211 LSGASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSL 270
Query: 221 SHPWVR 226
            HPW++
Sbjct: 271 QHPWIK 276

>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer Length = 406

Iteration: 1
 Score =  130 bits (327), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 122/243 (50%), Gaps = 16/243 (6%)
Query: 47  EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 106
           +GGEL  RI  + D  +TE++A+ +++ +       H   + HRD+KPEN L+ S + ++
Sbjct: 148 DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNA 207
Query: 107 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILL 161
            LK TDFG +              + YYVAPEVL    GPE      D+WS+GVI YILL
Sbjct: 208 ILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL----GPEKYDKSCDMWSLGVIMYILL 263
Query: 162 CGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
           CG  PF+         G+   +   + +F    W  +S   K  ++ LL  +P  R+T  
Sbjct: 264 CGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT 323
Query: 218 QALSHPWVREGGDASEIPIDIS-VLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQ 276
           + ++HPW+ +     + P+  S VL   ++  ++  +K+    ALA+   D E   ++  
Sbjct: 324 EFMNHPWIMQSTKVPQTPLHTSRVLKEDKE--RWEDVKEEMTSALATMRVDYEQIKIKKI 381
Query: 277 FDA 279
            DA
Sbjct: 382 EDA 384

>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2 Length = 400

Iteration: 1
 Score =  130 bits (327), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 122/243 (50%), Gaps = 16/243 (6%)
Query: 47  EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 106
           +GGEL  RI  + D  +TE++A+ +++ +       H   + HRD+KPEN L+ S + ++
Sbjct: 142 DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNA 201
Query: 107 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILL 161
            LK TDFG +              + YYVAPEVL    GPE      D+WS+GVI YILL
Sbjct: 202 ILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL----GPEKYDKSCDMWSLGVIMYILL 257
Query: 162 CGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
           CG  PF+         G+   +   + +F    W  +S   K  ++ LL  +P  R+T  
Sbjct: 258 CGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT 317
Query: 218 QALSHPWVREGGDASEIPIDIS-VLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQ 276
           + ++HPW+ +     + P+  S VL   ++  ++  +K+    ALA+   D E   ++  
Sbjct: 318 EFMNHPWIMQSTKVPQTPLHTSRVLKEDKE--RWEDVKEEMTSALATMRVDYEQIKIKKI 375
Query: 277 FDA 279
            DA
Sbjct: 376 EDA 378

>pdb|2OZA|A Chain A, Structure Of P38alpha Complex Length = 356

Iteration: 1
 Score =  130 bits (327), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 122/243 (50%), Gaps = 16/243 (6%)
Query: 47  EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 106
           +GGEL  RI  + D  +TE++A+ +++ +       H   + HRD+KPEN L+ S + ++
Sbjct: 98  DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNA 157
Query: 107 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILL 161
            LK TDFG +              + YYVAPEVL    GPE      D+WS+GVI YILL
Sbjct: 158 ILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL----GPEKYDKSCDMWSLGVIMYILL 213
Query: 162 CGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
           CG  PF+         G+   +   + +F    W  +S   K  ++ LL  +P  R+T  
Sbjct: 214 CGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT 273
Query: 218 QALSHPWVREGGDASEIPIDIS-VLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQ 276
           + ++HPW+ +     + P+  S VL   ++  ++  +K+    ALA+   D E   ++  
Sbjct: 274 EFMNHPWIMQSTKVPQTPLHTSRVLKEDKE--RWEDVKEEMTSALATMRVDYEQIKIKKI 331
Query: 277 FDA 279
            DA
Sbjct: 332 EDA 334

>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine Length = 295

Iteration: 1
 Score =  130 bits (326), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 74/184 (40%), Positives = 108/184 (58%), Gaps = 4/184 (2%)
Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAK 103
           L  GGEL D  LA+K+S  TE++A   ++Q+L      H   + H D+KPEN  L     
Sbjct: 95  LVAGGELFD-FLAEKES-LTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152
Query: 104 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC 162
               +K  DFGL+  I  G +F++I G+  +VAPE++  +  G E+D+WSIGVITYILL 
Sbjct: 153 PKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212
Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           G  PF   T+      V     +F  + + + S  AKDF+++LLVKDP+ R+T   +L H
Sbjct: 213 GASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272
Query: 223 PWVR 226
           PW++
Sbjct: 273 PWIK 276

>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated Protein Kinase And Immunoglobulin Domains Length = 491

Iteration: 1
 Score =  130 bits (326), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 110/195 (56%), Gaps = 6/195 (3%)
Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
              GGEL +++ A + ++ +E +A   +RQ+ +     H +  VH D+KPEN +F + K 
Sbjct: 129 FMSGGELFEKV-ADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMF-TTKR 186
Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCG 163
            + LK  DFGL+  + P +  +   G+A + APEV + K  G  +D+WS+GV++YILL G
Sbjct: 187 SNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 246
Query: 164 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 223
             PF  + +D   + V     +     +  IS   KDF++KLL+ DP  R+T  QAL HP
Sbjct: 247 LSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHP 306
Query: 224 WVREG---GDASEIP 235
           W+  G   G  S+IP
Sbjct: 307 WLTPGNAPGRDSQIP 321

>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans (Fn31-Nl-Kin-Crd-Ig26) Length = 573

Iteration: 1
 Score =  129 bits (325), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 71/192 (36%), Positives = 110/192 (57%), Gaps = 6/192 (3%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGEL +++ A + ++ +E +A   +RQ+ +     H +  VH D+KPEN +F + K  + 
Sbjct: 238 GGELFEKV-ADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMF-TTKRSNE 295
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRP 166
           LK  DFGL+  + P +  +   G+A + APEV + K  G  +D+WS+GV++YILL G  P
Sbjct: 296 LKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 355
Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 226
           F  + +D   + V     +     +  IS   KDF++KLL+ DP  R+T  QAL HPW+ 
Sbjct: 356 FGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLT 415
Query: 227 EG---GDASEIP 235
            G   G  S+IP
Sbjct: 416 PGNAPGRDSQIP 427

>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor 6-(5-(2-Aminopyrimidin-4-Ylamino)-2- Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide Length = 320

Iteration: 1
 Score =  129 bits (325), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 104/202 (51%), Gaps = 13/202 (6%)
Query: 47  EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 106
           +GGEL  RI  + D  +TE++A+ +++ +       H   + HRD+KPEN L+ S + ++
Sbjct: 96  DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNA 155
Query: 107 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILL 161
            LK TDFG +          +   + YYVAPEVL    GPE      D+WS+GVI YILL
Sbjct: 156 ILKLTDFGFAKETTSHNSLTEPCYTPYYVAPEVL----GPEKYDKSCDMWSLGVIMYILL 211
Query: 162 CGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
           CG  PF+         G+   +   + +F    W  +S   K  ++ LL  +P  R+T  
Sbjct: 212 CGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT 271
Query: 218 QALSHPWVREGGDASEIPIDIS 239
           + ++HPW+ +     + P+  S
Sbjct: 272 EFMNHPWIMQSTKVPQTPLHTS 293

>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To Mapkap Kinase-2 Length = 327

Iteration: 1
 Score =  129 bits (324), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 118/233 (50%), Gaps = 16/233 (6%)
Query: 47  EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 106
           +GGEL  RI  + D  +TE++A+ +++ +       H   + HRD+KPEN L+ S + ++
Sbjct: 98  DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNA 157
Query: 107 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILL 161
            LK TDFG +              + YYVAPEVL    GPE      D+WS+GVI YILL
Sbjct: 158 ILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL----GPEKYDKSCDMWSLGVIMYILL 213
Query: 162 CGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
           CG  PF+         G+   +   + +F    W  +S   K  ++ LL  +P  R+T  
Sbjct: 214 CGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT 273
Query: 218 QALSHPWVREGGDASEIPIDIS-VLNNMRQFVKYSRLKQFALRALASTLDDEE 269
           + ++HPW+ +     + P+  S VL   ++  ++  +K+    ALA+   D E
Sbjct: 274 EFMNHPWIMQSTKVPQTPLHTSRVLKEDKE--RWEDVKEEMTSALATMRVDYE 324

>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap Kinase-2 Length = 325

Iteration: 1
 Score =  129 bits (323), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 47  EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 106
           +GGEL  RI  + D  +TE++A+ +++ +       H   + HRD+KPEN L+ S + ++
Sbjct: 103 DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNA 162
Query: 107 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILL 161
            LK TDFG +              + YYVAPEVL    GPE      D+WS+GVI YILL
Sbjct: 163 ILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL----GPEKYDKSCDMWSLGVIMYILL 218
Query: 162 CGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
           CG  PF+         G+   +   + +F    W  +S   K  ++ LL  +P  R+T  
Sbjct: 219 CGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT 278
Query: 218 QALSHPWVREGGDASEIPIDIS 239
           + ++HPW+ +     + P+  S
Sbjct: 279 EFMNHPWIMQSTKVPQTPLHTS 300

>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b Length = 318

Iteration: 1
 Score =  129 bits (323), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 47  EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 106
           +GGEL  RI  + D  +TE++A+ +++ +       H   + HRD+KPEN L+ S + ++
Sbjct: 96  DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNA 155
Query: 107 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILL 161
            LK TDFG +              + YYVAPEVL    GPE      D+WS+GVI YILL
Sbjct: 156 ILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL----GPEKYDKSCDMWSLGVIMYILL 211
Query: 162 CGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
           CG  PF+         G+   +   + +F    W  +S   K  ++ LL  +P  R+T  
Sbjct: 212 CGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT 271
Query: 218 QALSHPWVREGGDASEIPIDIS 239
           + ++HPW+ +     + P+  S
Sbjct: 272 EFMNHPWIMQSTKVPQTPLHTS 293

>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76 Length = 324

Iteration: 1
 Score =  129 bits (323), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 47  EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 106
           +GGEL  RI  + D  +TE++A+ +++ +       H   + HRD+KPEN L+ S + ++
Sbjct: 102 DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNA 161
Query: 107 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILL 161
            LK TDFG +              + YYVAPEVL    GPE      D+WS+GVI YILL
Sbjct: 162 ILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL----GPEKYDKSCDMWSLGVIMYILL 217
Query: 162 CGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
           CG  PF+         G+   +   + +F    W  +S   K  ++ LL  +P  R+T  
Sbjct: 218 CGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT 277
Query: 218 QALSHPWVREGGDASEIPIDIS 239
           + ++HPW+ +     + P+  S
Sbjct: 278 EFMNHPWIMQSTKVPQTPLHTS 299

>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal Form-1, Soaking) Length = 326

Iteration: 1
 Score =  129 bits (323), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 47  EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 106
           +GGEL  RI  + D  +TE++A+ +++ +       H   + HRD+KPEN L+ S + ++
Sbjct: 104 DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNA 163
Query: 107 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILL 161
            LK TDFG +              + YYVAPEVL    GPE      D+WS+GVI YILL
Sbjct: 164 ILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL----GPEKYDKSCDMWSLGVIMYILL 219
Query: 162 CGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
           CG  PF+         G+   +   + +F    W  +S   K  ++ LL  +P  R+T  
Sbjct: 220 CGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT 279
Query: 218 QALSHPWVREGGDASEIPIDIS 239
           + ++HPW+ +     + P+  S
Sbjct: 280 EFMNHPWIMQSTKVPQTPLHTS 301

>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1 Length = 319

Iteration: 1
 Score =  128 bits (322), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 47  EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 106
           +GGEL  RI  + D  +TE++A+ +++ +       H   + HRD+KPEN L+ S + ++
Sbjct: 97  DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNA 156
Query: 107 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILL 161
            LK TDFG +              + YYVAPEVL    GPE      D+WS+GVI YILL
Sbjct: 157 ILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL----GPEKYDKSCDMWSLGVIMYILL 212
Query: 162 CGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
           CG  PF+         G+   +   + +F    W  +S   K  ++ LL  +P  R+T  
Sbjct: 213 CGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT 272
Query: 218 QALSHPWVREGGDASEIPIDIS 239
           + ++HPW+ +     + P+  S
Sbjct: 273 EFMNHPWIMQSTKVPQTPLHTS 294

>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands Length = 334

Iteration: 1
 Score =  128 bits (322), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 66/202 (32%), Positives = 103/202 (50%), Gaps = 13/202 (6%)
Query: 47  EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 106
           +GGEL  RI  + D  +TE++A+ +++ +       H   + HRD+KPEN L+ S + ++
Sbjct: 112 DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNA 171
Query: 107 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILL 161
            LK TDFG +              + YYVAPEVL    GPE      D+WS+GVI YILL
Sbjct: 172 ILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL----GPEKYDKSCDMWSLGVIMYILL 227
Query: 162 CGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
           CG  PF+         G+   +   + +F    W  +S   K  ++ LL  +P  R+T  
Sbjct: 228 CGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTIT 287
Query: 218 QALSHPWVREGGDASEIPIDIS 239
           + ++HPW+ +     + P+  S
Sbjct: 288 EFMNHPWIMQSTKVPQTPLHTS 309

>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2 Length = 365

Iteration: 1
 Score =  127 bits (320), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 66/187 (35%), Positives = 105/187 (56%), Gaps = 12/187 (6%)
Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L   GEL D +  K     +EK+   ++R +L   +  H + +VHRD+KPEN L     +
Sbjct: 181 LMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLD---D 235
Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-------SGPESDVWSIGVIT 157
           +  ++ +DFG S  ++PG+K +++ G+  Y+APE+LK          G E D+W+ GVI 
Sbjct: 236 NMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVIL 295
Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
           + LL G  PFW + +  + + ++  +  F    W   S++ KD + +LL  DP ARLTA 
Sbjct: 296 FTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAE 355
Query: 218 QALSHPW 224
           QAL HP+
Sbjct: 356 QALQHPF 362

>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide Substrate Complex: Kinase Substrate Recognition Length = 277

Iteration: 1
 Score =  127 bits (319), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 67/190 (35%), Positives = 105/190 (55%), Gaps = 12/190 (6%)
Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L + GEL D +  K     +EK+   ++R +L V    H   +VHRD+KPEN L     +
Sbjct: 92  LMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD---D 146
Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-------SGPESDVWSIGVIT 157
           D ++K TDFG S  + PG+K +++ G+  Y+APE+++          G E D+WS GVI 
Sbjct: 147 DMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 206
Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
           Y LL G  PFW + +  + + ++     F    W   S++ KD V + LV  P+ R TA 
Sbjct: 207 YTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAE 266
Query: 218 QALSHPWVRE 227
           +AL+HP+ ++
Sbjct: 267 EALAHPFFQQ 276

>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase, Kinase: An Active Protein Kinase Complexed With Nucleotide, Substrate-Analogue And Product Length = 298

Iteration: 1
 Score =  127 bits (319), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 67/190 (35%), Positives = 105/190 (55%), Gaps = 12/190 (6%)
Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L + GEL D +  K     +EK+   ++R +L V    H   +VHRD+KPEN L     +
Sbjct: 105 LMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD---D 159
Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-------SGPESDVWSIGVIT 157
           D ++K TDFG S  + PG+K +++ G+  Y+APE+++          G E D+WS GVI 
Sbjct: 160 DMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 219
Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
           Y LL G  PFW + +  + + ++     F    W   S++ KD V + LV  P+ R TA 
Sbjct: 220 YTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAE 279
Query: 218 QALSHPWVRE 227
           +AL+HP+ ++
Sbjct: 280 EALAHPFFQQ 289

>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By Mutational Studies Length = 298

Iteration: 1
 Score =  126 bits (317), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 67/190 (35%), Positives = 104/190 (54%), Gaps = 12/190 (6%)
Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L + GEL D +  K     +EK+   ++R +L V    H   +VHRD+KPEN L     +
Sbjct: 105 LMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD---D 159
Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-------SGPESDVWSIGVIT 157
           D ++K TDFG S  + PG+K + + G+  Y+APE+++          G E D+WS GVI 
Sbjct: 160 DMNIKLTDFGFSCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 219
Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
           Y LL G  PFW + +  + + ++     F    W   S++ KD V + LV  P+ R TA 
Sbjct: 220 YTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAE 279
Query: 218 QALSHPWVRE 227
           +AL+HP+ ++
Sbjct: 280 EALAHPFFQQ 289

>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g Length = 316

Iteration: 1
 Score =  126 bits (317), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/217 (37%), Positives = 111/217 (51%), Gaps = 31/217 (14%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG +L  I   K   + E +A+VVV+ +       H  G+ HRD+KPEN L +   + S 
Sbjct: 95  GGSILSHI--HKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSP 152
Query: 108 LKATDFGLSDFIKPGKKFQDI--------VGSAYYVAPEVLKRKSGPES------DVWSI 153
           +K  DFGL   IK       I         GSA Y+APEV++  S   S      D+WS+
Sbjct: 153 VKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSL 212
Query: 154 GVITYILLCGRRPF---------WDKTE------DGIFKEVLRNKPDFRRKPWPSISNSA 198
           GVI YILL G  PF         WD+ E      + +F+ +   K +F  K W  IS +A
Sbjct: 213 GVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAA 272
Query: 199 KDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 235
           KD + KLLV+D + RL+AAQ L HPWV+     + +P
Sbjct: 273 KDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENTLP 309

>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase 2 Length = 400

Iteration: 1
 Score =  125 bits (315), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 117/243 (48%), Gaps = 16/243 (6%)
Query: 47  EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 106
           +GGEL  RI  + D  +TE++A+ + + +       H   + HRD+KPEN L+ S + ++
Sbjct: 142 DGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNA 201
Query: 107 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPE-----SDVWSIGVITYILL 161
            LK TDFG +              + YYVAPEVL    GPE      D WS+GVI YILL
Sbjct: 202 ILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVL----GPEKYDKSCDXWSLGVIXYILL 257
Query: 162 CGRRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
           CG  PF+         G    +   + +F    W  +S   K  ++ LL  +P  R T  
Sbjct: 258 CGYPPFYSNHGLAISPGXKTRIRXGQYEFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTIT 317
Query: 218 QALSHPWVREGGDASEIPIDIS-VLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQ 276
           +  +HPW+ +     + P+  S VL   ++  ++  +K+    ALA+   D E   ++  
Sbjct: 318 EFXNHPWIXQSTKVPQTPLHTSRVLKEDKE--RWEDVKEEXTSALATMRVDYEQIKIKKI 375
Query: 277 FDA 279
            DA
Sbjct: 376 EDA 378

>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form Length = 351

Iteration: 1
 Score =  124 bits (312), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 126/222 (56%), Gaps = 7/222 (3%)
Query: 47  EGGELLDRILAKKDSR--YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           +G +L   I+ + D+   Y+E  A+  +RQ+L     CH + ++HRD+KP   L  S + 
Sbjct: 109 DGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKEN 168
Query: 105 DSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC 162
            + +K   FG++    + G      VG+ +++APEV+KR+  G   DVW  GVI +ILL 
Sbjct: 169 SAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS 228
Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           G  PF+  T++ +F+ +++ K     + W  IS SAKD V+++L+ DP  R+T  +AL+H
Sbjct: 229 GCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNH 287
Query: 223 PWVREGGDASEIPIDI-SVLNNMRQFVKYSRLKQFALRALAS 263
           PW++E  D     I +   +  +R+F    +LK   L A++S
Sbjct: 288 PWLKE-RDRYAYKIHLPETVEQLRKFNARRKLKGAVLAAVSS 328

>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX Length = 361

Iteration: 1
 Score =  124 bits (312), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 126/222 (56%), Gaps = 7/222 (3%)
Query: 47  EGGELLDRILAKKDSR--YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           +G +L   I+ + D+   Y+E  A+  +RQ+L     CH + ++HRD+KP   L  S + 
Sbjct: 111 DGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKEN 170
Query: 105 DSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLC 162
            + +K   FG++    + G      VG+ +++APEV+KR+  G   DVW  GVI +ILL 
Sbjct: 171 SAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLS 230
Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           G  PF+  T++ +F+ +++ K     + W  IS SAKD V+++L+ DP  R+T  +AL+H
Sbjct: 231 GCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNH 289
Query: 223 PWVREGGDASEIPIDI-SVLNNMRQFVKYSRLKQFALRALAS 263
           PW++E  D     I +   +  +R+F    +LK   L A++S
Sbjct: 290 PWLKE-RDRYAYKIHLPETVEQLRKFNARRKLKGAVLAAVSS 330

>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment Length = 336

Iteration: 1
 Score =  124 bits (311), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 73/202 (36%), Positives = 109/202 (53%), Gaps = 24/202 (11%)
Query: 28  TRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGL 87
           T P +IV+ +          GGEL D I+ KK  R TE +     +Q++     CH H +
Sbjct: 79  TTPTDIVMVIEY-------AGGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHRHKI 129
Query: 88  VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK--SG 145
           VHRD+KPEN L     ++ ++K  DFGLS+ +  G   +   GS  Y APEV+  K  +G
Sbjct: 130 VHRDLKPENLLLD---DNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAG 186
Query: 146 PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV---LRNKPDFRRKPWPSISNSAKDFV 202
           PE DVWS G++ Y++L GR PF D+    +FK+V   +   PDF       +S  A+  +
Sbjct: 187 PEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYVMPDF-------LSPGAQSLI 239
Query: 203 KKLLVKDPRARLTAAQALSHPW 224
           ++++V DP  R+T  +    PW
Sbjct: 240 RRMIVADPMQRITIQEIRRDPW 261

>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain Length = 316

Iteration: 1
 Score =  123 bits (309), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/217 (36%), Positives = 110/217 (50%), Gaps = 31/217 (14%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG +L  I   K   + E +A+VVV+ +       H  G+ HRD+KPEN L +   + S 
Sbjct: 95  GGSILSHI--HKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSP 152
Query: 108 LKATDFGLSDFIKPGKKFQDI--------VGSAYYVAPEVLKRKSGPES------DVWSI 153
           +K  DF L   IK       I         GSA Y+APEV++  S   S      D+WS+
Sbjct: 153 VKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSL 212
Query: 154 GVITYILLCGRRPF---------WDKTE------DGIFKEVLRNKPDFRRKPWPSISNSA 198
           GVI YILL G  PF         WD+ E      + +F+ +   K +F  K W  IS +A
Sbjct: 213 GVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAA 272
Query: 199 KDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 235
           KD + KLLV+D + RL+AAQ L HPWV+     + +P
Sbjct: 273 KDLISKLLVRDAKQRLSAAQVLQHPWVQGCAPENTLP 309

>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain Length = 307

Iteration: 1
 Score =  122 bits (307), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/216 (36%), Positives = 114/216 (52%), Gaps = 33/216 (15%)
Query: 47  EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 106
           +GG +L  I  +K   + E++A+ VVR +       H  G+ HRD+KPEN L +S ++ S
Sbjct: 94  QGGSILAHI--QKQKHFNEREASRVVRDVAAALDFLHTKGIAHRDLKPENILCESPEKVS 151
Query: 107 SLKATDFGLSDFIKPGKKFQDI--------VGSAYYVAPEVLKRKSGPES------DVWS 152
            +K  DF L   +K       I         GSA Y+APEV++  +   +      D+WS
Sbjct: 152 PVKICDFDLGSGMKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWS 211
Query: 153 IGVITYILLCGRRPF---------WDKTE------DGIFKEVLRNKPDFRRKPWPSISNS 197
           +GV+ YI+L G  PF         WD+ E      + +F+ +   K +F  K W  IS+ 
Sbjct: 212 LGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSE 271
Query: 198 AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 233
           AKD + KLLV+D + RL+AAQ L HPWV+  G A E
Sbjct: 272 AKDLISKLLVRDAKQRLSAAQVLQHPWVQ--GQAPE 305

>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase Length = 330

Iteration: 1
 Score =  121 bits (304), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 69/189 (36%), Positives = 102/189 (53%), Gaps = 8/189 (4%)
Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF-KSAK 103
           L  GGELLD+IL +K   ++E++A+ V+  + +     H  G+VHRD+KP N L+   + 
Sbjct: 102 LMRGGELLDKILRQK--FFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESG 159
Query: 104 EDSSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILL 161
               L+  DFG +  ++           +A +VAPEVLKR+   E  D+WS+G++ Y +L
Sbjct: 160 NPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTML 219
Query: 162 CGRRPFWDKTEDG---IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 218
            G  PF +   D    I   +   K       W ++S +AKD V K+L  DP  RLTA Q
Sbjct: 220 AGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQ 279
Query: 219 ALSHPWVRE 227
            L HPWV +
Sbjct: 280 VLQHPWVTQ 288

>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain Length = 346

Iteration: 1
 Score =  121 bits (303), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 69/189 (36%), Positives = 102/189 (53%), Gaps = 8/189 (4%)
Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF-KSAK 103
           L  GGELLD+IL +K   ++E++A+ V+  + +     H  G+VHRD+KP N L+   + 
Sbjct: 102 LMRGGELLDKILRQK--FFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESG 159
Query: 104 EDSSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILL 161
               L+  DFG +  ++           +A +VAPEVLKR+   E  D+WS+G++ Y +L
Sbjct: 160 NPECLRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLKRQGYDEGCDIWSLGILLYTML 219
Query: 162 CGRRPFWDKTEDG---IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 218
            G  PF +   D    I   +   K       W ++S +AKD V K+L  DP  RLTA Q
Sbjct: 220 AGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVSKMLHVDPHQRLTAKQ 279
Query: 219 ALSHPWVRE 227
            L HPWV +
Sbjct: 280 VLQHPWVTQ 288

>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 (rsk2) Length = 342

Iteration: 1
 Score =  120 bits (301), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 104/187 (55%), Gaps = 8/187 (4%)
Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF-KSAK 103
           L +GGELLD+IL +K   ++E++A+ V+  + +     H  G+VHRD+KP N L+   + 
Sbjct: 97  LMKGGELLDKILRQK--FFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESG 154
Query: 104 EDSSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILL 161
              S++  DFG +  ++           +A +VAPEVL+R+      D+WS+GV+ Y +L
Sbjct: 155 NPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTML 214
Query: 162 CGRRPFW---DKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 218
            G  PF    D T + I   +   K       W S+S++AKD V K+L  DP  RLTAA 
Sbjct: 215 TGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAAL 274
Query: 219 ALSHPWV 225
            L HPW+
Sbjct: 275 VLRHPWI 281

>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase From Arabidopsis Thaliana Length = 166

Iteration: 1
 Score =  120 bits (300), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 70/173 (40%), Positives = 104/173 (60%), Gaps = 11/173 (6%)
Query: 245 RQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWK 304
           +QF   ++ K+ ALR +A +L +EE+A L++ F+ ID DK+G I+ EE++  L K +   
Sbjct: 1   KQFSAXNKFKKXALRVIAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGL-KRVGAN 59
Query: 305 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRD 364
           LKES +L++ QA D +  G +D+ EF+AATLH++++E  D    HL   AAF  FD D  
Sbjct: 60  LKESEILDLXQAADVDNSGTIDYKEFIAATLHLNKIERED----HLF--AAFTYFDKDGS 113
Query: 365 GFITPEELRMHTGLKGSIDPLLEE----ADIDKDGRISLSEFRRLLRTASISS 413
           G+ITP+EL+      G  D  +EE     D D DGRI  +EF    +  SI+ 
Sbjct: 114 GYITPDELQQACEEFGVEDVRIEELXRDVDQDNDGRIDYNEFVAXXQKGSITG 166

>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1 In With Amp-Pnp Length = 325

Iteration: 1
 Score =  118 bits (295), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 66/209 (31%), Positives = 109/209 (52%), Gaps = 11/209 (5%)
Query: 37  LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 96
           L     + L  GGEL +RI  KK   ++E +A+ ++R+++   +  H  G+VHRD+KPEN
Sbjct: 79  LHTFLVMELLNGGELFERI--KKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPEN 136
Query: 97  FLFKSAKEDSSLKATDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKRKSGPES-DVWSIG 154
            LF    ++  +K  DFG +    P  +  +    + +Y APE+L +    ES D+WS+G
Sbjct: 137 LLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLG 196
Query: 155 VITYILLCGRRPFWDK-------TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV 207
           VI Y +L G+ PF          +   I K++ +    F  + W ++S  AKD ++ LL 
Sbjct: 197 VILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLT 256
Query: 208 KDPRARLTAAQALSHPWVREGGDASEIPI 236
            DP  RL  +    + W+++G   S  P+
Sbjct: 257 VDPNKRLKMSGLRYNEWLQDGSQLSSNPL 285

>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2: Se-Met Derivative Length = 342

Iteration: 1
 Score =  117 bits (293), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 102/187 (54%), Gaps = 8/187 (4%)
Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF-KSAK 103
           L +GGELLD+IL +K   ++E++A+ V+  + +     H  G+VHRD+KP N L+   + 
Sbjct: 97  LXKGGELLDKILRQK--FFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESG 154
Query: 104 EDSSLKATDFGLSDFIKPGKKFQDI-VGSAYYVAPEVLKRKS-GPESDVWSIGVITYILL 161
              S++  DFG +  ++           +A +VAPEVL+R+      D+WS+GV+ Y  L
Sbjct: 155 NPESIRICDFGFAKQLRAENGLLXTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXL 214
Query: 162 CGRRPFW---DKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 218
            G  PF    D T + I   +   K       W S+S++AKD V K L  DP  RLTAA 
Sbjct: 215 TGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKXLHVDPHQRLTAAL 274
Query: 219 ALSHPWV 225
            L HPW+
Sbjct: 275 VLRHPWI 281

>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B (STK17B) Length = 327

Iteration: 1
 Score =  115 bits (288), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 58/181 (32%), Positives = 97/181 (53%), Gaps = 1/181 (0%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGE+    L +     +E D   +++Q+L      H + +VH D+KP+N L  S      
Sbjct: 113 GGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGD 172
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRP 166
           +K  DFG+S  I    + ++I+G+  Y+APE+L        +D+W+IG+I Y+LL    P
Sbjct: 173 IKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSP 232
Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 226
           F  +     +  + +   D+  + + S+S  A DF++ LLVK+P  R TA   LSH W++
Sbjct: 233 FVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWLQ 292
Query: 227 E 227
           +
Sbjct: 293 Q 293

>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain Kinase Loc340156. Length = 373

Iteration: 1
 Score =  115 bits (287), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 74/219 (33%), Positives = 116/219 (52%), Gaps = 15/219 (6%)
Query: 13  NCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRY--TEKDAAV 70
           N LD  NL+          +IVL +         +GGEL DRI+   D  Y  TE D  +
Sbjct: 141 NQLDHANLIQLYDAFESKNDIVLVME------YVDGGELFDRII---DESYNLTELDTIL 191
Query: 71  VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 130
            ++Q+       H   ++H D+KPEN L  + ++   +K  DFGL+   KP +K +   G
Sbjct: 192 FMKQICEGIRHMHQMYILHLDLKPENILCVN-RDAKQIKIIDFGLARRYKPREKLKVNFG 250
Query: 131 SAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 188
           +  ++APEV+     S P +D+WS+GVI Y+LL G  PF    +      +L  + D   
Sbjct: 251 TPEFLAPEVVNYDFVSFP-TDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLED 309
Query: 189 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
           + +  IS  AK+F+ KLL+K+   R++A++AL HPW+ +
Sbjct: 310 EEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSD 348

>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle Protein Titin Length = 321

Iteration: 1
 Score =  114 bits (284), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 96/164 (58%), Gaps = 2/164 (1%)
Query: 65  EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 124
           E++    V Q+       H H + H D++PEN ++++ +  S++K  +FG +  +KPG  
Sbjct: 101 EREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT-RRSSTIKIIEFGQARQLKPGDN 159
Query: 125 FQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK 183
           F+ +  +  Y APEV +       +D+WS+G + Y+LL G  PF  +T   I + ++  +
Sbjct: 160 FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAE 219
Query: 184 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
             F  + +  IS  A DFV +LLVK+ ++R+TA++AL HPW+++
Sbjct: 220 YTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQ 263

>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain Length = 283

Iteration: 1
 Score =  114 bits (284), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/184 (34%), Positives = 100/184 (54%), Gaps = 17/184 (9%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           G EL D I+ +   + +E++A    +Q++     CH H +VHRD+KPEN L     E  +
Sbjct: 97  GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLD---EHLN 151
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRR 165
           +K  DFGLS+ +  G   +   GS  Y APEV+  K  +GPE DVWS GVI Y++LC R 
Sbjct: 152 VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRL 211
Query: 166 PFWDKTEDGIFKEV---LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           PF D++   +FK +   +   P F       +S  A   +K++L+ +P  R++  + +  
Sbjct: 212 PFDDESIPVLFKNISNGVYTLPKF-------LSPGAAGLIKRMLIVNPLNRISIHEIMQD 264
Query: 223 PWVR 226
            W +
Sbjct: 265 DWFK 268

>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of The Saccharomyces Cerevisiae Ampk Homolog Snf1 Length = 271

Iteration: 1
 Score =  113 bits (283), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/184 (34%), Positives = 100/184 (54%), Gaps = 17/184 (9%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           G EL D I+ +   + +E++A    +Q++     CH H +VHRD+KPEN L     E  +
Sbjct: 87  GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLD---EHLN 141
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRR 165
           +K  DFGLS+ +  G   +   GS  Y APEV+  K  +GPE DVWS GVI Y++LC R 
Sbjct: 142 VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRL 201
Query: 166 PFWDKTEDGIFKEV---LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           PF D++   +FK +   +   P F       +S  A   +K++L+ +P  R++  + +  
Sbjct: 202 PFDDESIPVLFKNISNGVYTLPKF-------LSPGAAGLIKRMLIVNPLNRISIHEIMQD 254
Query: 223 PWVR 226
            W +
Sbjct: 255 DWFK 258

>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast Amp-Activated Protein Kinase Snf1 Length = 275

Iteration: 1
 Score =  113 bits (283), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/184 (34%), Positives = 100/184 (54%), Gaps = 17/184 (9%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           G EL D I+ +   + +E++A    +Q++     CH H +VHRD+KPEN L     E  +
Sbjct: 96  GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLD---EHLN 150
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRR 165
           +K  DFGLS+ +  G   +   GS  Y APEV+  K  +GPE DVWS GVI Y++LC R 
Sbjct: 151 VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRL 210
Query: 166 PFWDKTEDGIFKEV---LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           PF D++   +FK +   +   P F       +S  A   +K++L+ +P  R++  + +  
Sbjct: 211 PFDDESIPVLFKNISNGVYTLPKF-------LSPGAAGLIKRMLIVNPLNRISIHEIMQD 263
Query: 223 PWVR 226
            W +
Sbjct: 264 DWFK 267

>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast Snf1 Length = 274

Iteration: 1
 Score =  113 bits (283), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 64/184 (34%), Positives = 100/184 (54%), Gaps = 17/184 (9%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           G EL D I+ +   + +E++A    +Q++     CH H +VHRD+KPEN L     E  +
Sbjct: 91  GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLD---EHLN 145
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRR 165
           +K  DFGLS+ +  G   +   GS  Y APEV+  K  +GPE DVWS GVI Y++LC R 
Sbjct: 146 VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRL 205
Query: 166 PFWDKTEDGIFKEV---LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           PF D++   +FK +   +   P F       +S  A   +K++L+ +P  R++  + +  
Sbjct: 206 PFDDESIPVLFKNISNGVYTLPKF-------LSPGAAGLIKRMLIVNPLNRISIHEIMQD 258
Query: 223 PWVR 226
            W +
Sbjct: 259 DWFK 262

>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r, T208e Double Mutant Length = 327

Iteration: 1
 Score =  112 bits (280), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 100/194 (51%), Gaps = 11/194 (5%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +    GGE+ D ++A    R  EK+A    RQ++     CH   +VHRD+K EN L  + 
Sbjct: 92  MEYASGGEVFDYLVAH--GRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA- 148
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYIL 160
             D ++K  DFG S+    G K  +  GS  Y APE+   K+  GPE DVWS+GVI Y L
Sbjct: 149 --DMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTL 206
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           + G  PF  +    + + VLR K    R P+  +S   ++ +KK L+ +P  R T  Q +
Sbjct: 207 VSGSLPFDGQNLKELRERVLRGK---YRIPF-YMSTDCENLLKKFLILNPSKRGTLEQIM 262
Query: 221 SHPWVREGGDASEI 234
              W+  G +  E+
Sbjct: 263 KDRWMNVGHEDDEL 276

>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: K82r Mutant Length = 327

Iteration: 1
 Score =  111 bits (278), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 99/194 (51%), Gaps = 11/194 (5%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +    GGE+ D ++A    R  EK+A    RQ++     CH   +VHRD+K EN L  + 
Sbjct: 92  MEYASGGEVFDYLVAH--GRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA- 148
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYIL 160
             D ++K  DFG S+    G K     GS  Y APE+   K+  GPE DVWS+GVI Y L
Sbjct: 149 --DMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTL 206
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           + G  PF  +    + + VLR K    R P+  +S   ++ +KK L+ +P  R T  Q +
Sbjct: 207 VSGSLPFDGQNLKELRERVLRGK---YRIPF-YMSTDCENLLKKFLILNPSKRGTLEQIM 262
Query: 221 SHPWVREGGDASEI 234
              W+  G +  E+
Sbjct: 263 KDRWMNVGHEDDEL 276

>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Wild Type Length = 327

Iteration: 1
 Score =  111 bits (278), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 99/194 (51%), Gaps = 11/194 (5%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +    GGE+ D ++A    R  EK+A    RQ++     CH   +VHRD+K EN L  + 
Sbjct: 92  MEYASGGEVFDYLVAH--GRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA- 148
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYIL 160
             D ++K  DFG S+    G K     GS  Y APE+   K+  GPE DVWS+GVI Y L
Sbjct: 149 --DMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTL 206
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           + G  PF  +    + + VLR K    R P+  +S   ++ +KK L+ +P  R T  Q +
Sbjct: 207 VSGSLPFDGQNLKELRERVLRGK---YRIPF-YMSTDCENLLKKFLILNPSKRGTLEQIM 262
Query: 221 SHPWVREGGDASEI 234
              W+  G +  E+
Sbjct: 263 KDRWMNVGHEDDEL 276

>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant Length = 327

Iteration: 1
 Score =  111 bits (278), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 99/194 (51%), Gaps = 11/194 (5%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +    GGE+ D ++A    R  EK+A    RQ++     CH   +VHRD+K EN L  + 
Sbjct: 92  MEYASGGEVFDYLVAH--GRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA- 148
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYIL 160
             D ++K  DFG S+    G K     GS  Y APE+   K+  GPE DVWS+GVI Y L
Sbjct: 149 --DMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTL 206
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           + G  PF  +    + + VLR K    R P+  +S   ++ +KK L+ +P  R T  Q +
Sbjct: 207 VSGSLPFDGQNLKELRERVLRGK---YRIPF-YMSTDCENLLKKFLILNPSKRGTLEQIM 262
Query: 221 SHPWVREGGDASEI 234
              W+  G +  E+
Sbjct: 263 KDRWMNVGHEDDEL 276

>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1 Length = 328

Iteration: 1
 Score =  111 bits (277), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 68/194 (35%), Positives = 99/194 (51%), Gaps = 11/194 (5%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +    GGE+ D ++A    R  EK+A    RQ++     CH   +VHRD+K EN L  + 
Sbjct: 90  MEYASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDA- 146
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYIL 160
             D ++K  DFG S+    G K     GS  Y APE+   K+  GPE DVWS+GVI Y L
Sbjct: 147 --DMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTL 204
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           + G  PF  +    + + VLR K    R P+  +S   ++ +K+ LV +P  R T  Q +
Sbjct: 205 VSGSLPFDGQNLKELRERVLRGK---YRIPF-YMSTDCENLLKRFLVLNPIKRGTLEQIM 260
Query: 221 SHPWVREGGDASEI 234
              W+  G +  E+
Sbjct: 261 KDRWINAGHEEDEL 274

>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With A Potent 3-Aminopyrazole Atp Site Inhibitor Length = 299

Iteration: 1
 Score =  110 bits (276), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 58/197 (29%), Positives = 93/197 (47%), Gaps = 24/197 (12%)
Query: 47  EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 106
           +GGEL  RI  + D  +TE++A+ +++ +       H   + HRD+KPEN L+ S + ++
Sbjct: 98  DGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNA 157
Query: 107 SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRP 166
            LK TDFG                     A E    K     D+WS+GVI YILLCG  P
Sbjct: 158 ILKLTDFGF--------------------AKETTGEKYDKSCDMWSLGVIMYILLCGYPP 197
Query: 167 FWDK----TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           F+         G+   +   + +F    W  +S   K  ++ LL  +P  R+T  + ++H
Sbjct: 198 FYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257
Query: 223 PWVREGGDASEIPIDIS 239
           PW+ +     + P+  S
Sbjct: 258 PWIMQSTKVPQTPLHTS 274

>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human 5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant (T172d) Length = 276

Iteration: 1
 Score =  110 bits (275), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/185 (36%), Positives = 96/185 (51%), Gaps = 17/185 (9%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGEL D I   K  R  E +A  + +Q+L     CH H +VHRD+KPEN L  +     +
Sbjct: 95  GGELFDYIC--KHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDA---HMN 149
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRR 165
            K  DFGLS+ +  G+  +D  GS  Y APEV+  +  +GPE D+WS GVI Y LLCG  
Sbjct: 150 AKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTL 209
Query: 166 PFWDKTEDGIFKEV---LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           PF D+    +FK++   +   P++       ++ S    +  +L  DP  R T      H
Sbjct: 210 PFDDEHVPTLFKKIRGGVFYIPEY-------LNRSVATLLMHMLQVDPLKRATIKDIREH 262
Query: 223 PWVRE 227
            W ++
Sbjct: 263 EWFKQ 267

>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk Length = 476

Iteration: 1
 Score =  110 bits (275), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 101/202 (50%), Gaps = 17/202 (8%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGEL D I   K+ R  EK++  + +Q+L     CH H +VHRD+KPEN L  +     +
Sbjct: 100 GGELFDYIC--KNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDA---HMN 154
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRR 165
            K  DFGLS+ +  G+  +   GS  Y APEV+  +  +GPE D+WS GVI Y LLCG  
Sbjct: 155 AKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTL 214
Query: 166 PFWDKTEDGIFKEV---LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           PF D     +FK++   +   P +       ++ S    +K +L  DP  R T      H
Sbjct: 215 PFDDDHVPTLFKKICDGIFYTPQY-------LNPSVISLLKHMLQVDPMKRATIKDIREH 267
Query: 223 PWVREGGDASEIPIDISVLNNM 244
            W ++       P D S  + M
Sbjct: 268 EWFKQDLPKYLFPEDPSYSSTM 289

>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: T208aS212A INACTIVE DOUBLE MUTANT Length = 327

Iteration: 1
 Score =  110 bits (274), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/194 (34%), Positives = 99/194 (51%), Gaps = 11/194 (5%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +    GGE+ D ++A    R  EK+A    RQ++     CH   +VHRD+K EN L  + 
Sbjct: 92  MEYASGGEVFDYLVAH--GRMKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA- 148
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYIL 160
             D ++K  DFG S+    G K     G+  Y APE+   K+  GPE DVWS+GVI Y L
Sbjct: 149 --DMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTL 206
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           + G  PF  +    + + VLR K    R P+  +S   ++ +KK L+ +P  R T  Q +
Sbjct: 207 VSGSLPFDGQNLKELRERVLRGK---YRIPF-YMSTDCENLLKKFLILNPSKRGTLEQIM 262
Query: 221 SHPWVREGGDASEI 234
              W+  G +  E+
Sbjct: 263 KDRWMNVGHEDDEL 276

>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a Double Mutant Length = 328

Iteration: 1
 Score =  109 bits (273), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 67/189 (35%), Positives = 98/189 (51%), Gaps = 11/189 (5%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGE+ D ++A    R  EK+A    RQ++     CH   +VHRD+K EN L  +   D +
Sbjct: 98  GGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDA---DMN 152
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRR 165
           +K  DFG S+    G K     G+  Y APE+   K+  GPE DVWS+GVI Y L+ G  
Sbjct: 153 IKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 212
Query: 166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           PF  +    + + VLR K    R P+  +S   ++ +K+ LV +P  R T  Q +   W+
Sbjct: 213 PFDGQNLKELRERVLRGK---YRIPF-YMSTDCENLLKRFLVLNPIKRGTLEQIMKDRWI 268
Query: 226 REGGDASEI 234
             G +  E+
Sbjct: 269 NAGHEEDEL 277

>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES BY Mimicking Host Substrates Length = 319

Iteration: 1
 Score =  108 bits (269), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 67/194 (34%), Positives = 99/194 (51%), Gaps = 11/194 (5%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +    GGE+ D ++A    +  EK+A    RQ++     CH   +VHRD+K EN L  + 
Sbjct: 85  MEYASGGEVFDYLVAHGWMK--EKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA- 141
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYIL 160
             D ++K  DFG S+    G K     GS  Y APE+   K+  GPE DVWS+GVI Y L
Sbjct: 142 --DMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTL 199
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           + G  PF  +    + + VLR K    R P+  +S   ++ +KK L+ +P  R T  Q +
Sbjct: 200 VSGSLPFDGQNLKELRERVLRGK---YRIPF-YMSTDCENLLKKFLILNPSKRGTLEQIM 255
Query: 221 SHPWVREGGDASEI 234
              W+  G +  E+
Sbjct: 256 KDRWMNVGHEDDEL 269

>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2 Chain) Length = 276

Iteration: 1
 Score =  107 bits (268), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 95/185 (51%), Gaps = 17/185 (9%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGEL D I   K  R  E +A  + +Q+L     CH H +VHRD+KPEN L  +     +
Sbjct: 95  GGELFDYIC--KHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDA---HMN 149
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRR 165
            K  DFGLS+ +  G+  +   GS  Y APEV+  +  +GPE D+WS GVI Y LLCG  
Sbjct: 150 AKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTL 209
Query: 166 PFWDKTEDGIFKEV---LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           PF D+    +FK++   +   P++       ++ S    +  +L  DP  R T      H
Sbjct: 210 PFDDEHVPTLFKKIRGGVFYIPEY-------LNRSVATLLMHMLQVDPLKRATIKDIREH 262
Query: 223 PWVRE 227
            W ++
Sbjct: 263 EWFKQ 267

>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1: Inactive Double Mutant With Selenomethionine Length = 327

Iteration: 1
 Score =  106 bits (264), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 67/189 (35%), Positives = 95/189 (50%), Gaps = 11/189 (5%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGE+ D ++A    R  EK+A    RQ++     CH   +VHRD+K EN L  +   D +
Sbjct: 97  GGEVFDYLVAH--GRXKEKEARAKFRQIVSAVQYCHQKFIVHRDLKAENLLLDA---DXN 151
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRR 165
           +K  DFG S+    G K     G+  Y APE+   K+  GPE DVWS+GVI Y L+ G  
Sbjct: 152 IKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSL 211
Query: 166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           PF  +    + + VLR K    R P+   S   ++ +KK L+ +P  R T  Q     W 
Sbjct: 212 PFDGQNLKELRERVLRGK---YRIPF-YXSTDCENLLKKFLILNPSKRGTLEQIXKDRWX 267
Query: 226 REGGDASEI 234
             G +  E+
Sbjct: 268 NVGHEDDEL 276

>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From Cryptosporidium Parvum, Cgd7_40 Length = 345

Iteration: 1
 Score =  105 bits (261), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 63/174 (36%), Positives = 92/174 (52%), Gaps = 9/174 (5%)
Query: 65  EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIK--P 121
           EK  + ++RQ+       H  G+ HRD+KPENFLF S  +   +K  DFGLS +F K   
Sbjct: 167 EKLISNIMRQIFSALHYLHNQGICHRDIKPENFLF-STNKSFEIKLVDFGLSKEFYKLNN 225
Query: 122 GKKF--QDIVGSAYYVAPEVLKRKS---GPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
           G+ +      G+ Y+VAPEVL   +   GP+ D WS GV+ ++LL G  PF    +    
Sbjct: 226 GEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTI 285
Query: 177 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD 230
            +VL  K  F    +  +S  A+D +  LL ++   R  A +AL HPW+ +  D
Sbjct: 286 SQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSD 339

>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase Length = 278

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/186 (33%), Positives = 103/186 (55%), Gaps = 12/186 (6%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + +C  GE+ +R L  +   ++E +A   + Q++      H HG++HRD+   N L    
Sbjct: 90  LEMCHNGEM-NRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLT-- 146
Query: 103 KEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYIL 160
             + ++K  DFGL+  +K P +K   + G+  Y++PE+  R + G ESDVWS+G + Y L
Sbjct: 147 -RNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTL 205
Query: 161 LCGRRPF-WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA 219
           L GR PF  D  ++ + K VL    D+    + SI   AKD + +LL ++P  RL+ +  
Sbjct: 206 LIGRPPFDTDTVKNTLNKVVL---ADYEMPSFLSI--EAKDLIHQLLRRNPADRLSLSSV 260
Query: 220 LSHPWV 225
           L HP++
Sbjct: 261 LDHPFM 266

>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Pf-03758309 Length = 296

Iteration: 1
 Score =  103 bits (256), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 108/197 (54%), Gaps = 10/197 (5%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +   EGG L D +     +R  E+  A V   +L+  +  H  G++HRD+K ++ L    
Sbjct: 100 MEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT-- 154
Query: 103 KEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYIL 160
             D  +K +DFG  +   K   + + +VG+ Y++APE++ R   GPE D+WS+G++   +
Sbjct: 155 -HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 213
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           + G  P++++      K +  N P  R K    +S S K F+ +LLV+DP  R TAA+ L
Sbjct: 214 VDGEPPYFNEPPLKAMKMIRDNLPP-RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELL 272
Query: 221 SHPWVREGG-DASEIPI 236
            HP++ + G  AS +P+
Sbjct: 273 KHPFLAKAGPPASIVPL 289

>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 Length = 292

Iteration: 1
 Score =  103 bits (256), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 108/197 (54%), Gaps = 10/197 (5%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +   EGG L D +     +R  E+  A V   +L+  +  H  G++HRD+K ++ L    
Sbjct: 96  MEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT-- 150
Query: 103 KEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYIL 160
             D  +K +DFG  +   K   + + +VG+ Y++APE++ R   GPE D+WS+G++   +
Sbjct: 151 -HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 209
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           + G  P++++      K +  N P  R K    +S S K F+ +LLV+DP  R TAA+ L
Sbjct: 210 VDGEPPYFNEPPLKAMKMIRDNLPP-RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELL 268
Query: 221 SHPWVREGG-DASEIPI 236
            HP++ + G  AS +P+
Sbjct: 269 KHPFLAKAGPPASIVPL 285

>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In Complex With A Consensus Peptide Length = 301

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 108/197 (54%), Gaps = 10/197 (5%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +   EGG L D +     +R  E+  A V   +L+  +  H  G++HRD+K ++ L    
Sbjct: 105 MEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT-- 159
Query: 103 KEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYIL 160
             D  +K +DFG  +   K   + + +VG+ Y++APE++ R   GPE D+WS+G++   +
Sbjct: 160 -HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 218
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           + G  P++++      K +  N P  R K    +S S K F+ +LLV+DP  R TAA+ L
Sbjct: 219 VDGEPPYFNEPPLKAMKMIRDNLPP-RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELL 277
Query: 221 SHPWVREGG-DASEIPI 236
            HP++ + G  AS +P+
Sbjct: 278 KHPFLAKAGPPASIVPL 294

>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In Complex With Cgp74514a Length = 303

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/197 (32%), Positives = 108/197 (54%), Gaps = 10/197 (5%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +   EGG L D +     +R  E+  A V   +L+  +  H  G++HRD+K ++ L    
Sbjct: 107 MEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT-- 161
Query: 103 KEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYIL 160
             D  +K +DFG  +   K   + + +VG+ Y++APE++ R   GPE D+WS+G++   +
Sbjct: 162 -HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 220
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           + G  P++++      K +  N P  R K    +S S K F+ +LLV+DP  R TAA+ L
Sbjct: 221 VDGEPPYFNEPPLKAMKMIRDNLPP-RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELL 279
Query: 221 SHPWVREGG-DASEIPI 236
            HP++ + G  AS +P+
Sbjct: 280 KHPFLAKAGPPASIVPL 296

>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide Length = 346

Iteration: 1
 Score =  102 bits (255), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 105/194 (54%), Gaps = 9/194 (4%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +   EGG L D +     +R  E+  A V   +L+  +  H  G++HRD+K ++ L    
Sbjct: 150 MEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT-- 204
Query: 103 KEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYIL 160
             D  +K +DFG  +   K   + + +VG+ Y++APE++ R   GPE D+WS+G++   +
Sbjct: 205 -HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 263
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           + G  P++++      K +  N P  R K    +S S K F+ +LLV+DP  R TAA+ L
Sbjct: 264 VDGEPPYFNEPPLKAMKMIRDNLPP-RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELL 322
Query: 221 SHPWVREGGDASEI 234
            HP++ + G  + I
Sbjct: 323 KHPFLAKAGPPASI 336

>pdb|4FIE|A Chain A, Full-Length Human Pak4 Length = 423

Iteration: 1
 Score =  102 bits (254), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 62/194 (31%), Positives = 105/194 (54%), Gaps = 9/194 (4%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +   EGG L D +     +R  E+  A V   +L+  +  H  G++HRD+K ++ L    
Sbjct: 227 MEFLEGGALTDIV---THTRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT-- 281
Query: 103 KEDSSLKATDFGL-SDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYIL 160
             D  +K +DFG  +   K   + + +VG+ Y++APE++ R   GPE D+WS+G++   +
Sbjct: 282 -HDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEM 340
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           + G  P++++      K +  N P  R K    +S S K F+ +LLV+DP  R TAA+ L
Sbjct: 341 VDGEPPYFNEPPLKAMKMIRDNLPP-RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELL 399
Query: 221 SHPWVREGGDASEI 234
            HP++ + G  + I
Sbjct: 400 KHPFLAKAGPPASI 413

>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1 Length = 328

Iteration: 1
 Score = 99.0 bits (245), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 69/194 (35%), Positives = 99/194 (51%), Gaps = 11/194 (5%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +    GGE+ D ++A    R  EK+A    RQ++     CH   +VHRD+K EN L    
Sbjct: 93  MEYASGGEVFDYLVAH--GRMKEKEARAKFRQIVSAVQYCHQKYIVHRDLKAENLLLDG- 149
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYIL 160
             D ++K  DFG S+    G K     GS  Y APE+   K+  GPE DVWS+GVI Y L
Sbjct: 150 --DMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGPEVDVWSLGVILYTL 207
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           + G  PF  +    + + VLR K    R P+  +S   ++ +KKLLV +P  R +  Q +
Sbjct: 208 VSGSLPFDGQNLKELRERVLRGK---YRIPF-YMSTDCENLLKKLLVLNPIKRGSLEQIM 263
Query: 221 SHPWVREGGDASEI 234
              W+  G +  E+
Sbjct: 264 KDRWMNVGHEEEEL 277

>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632 Length = 306

Iteration: 1
 Score = 97.1 bits (240), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 90/172 (52%), Gaps = 15/172 (8%)
Query: 58  KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 117
           +K S++ E+  A  + ++    + CH   ++HRD+KPEN L  SA E   LK  DFG S 
Sbjct: 126 QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS- 181
Query: 118 FIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
              P  +  D+ G+  Y+ PE+++ R    + D+WS+GV+ Y  L G+ PF   T    +
Sbjct: 182 VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 241
Query: 177 KEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           K + R +   PDF       ++  A+D + +LL  +P  R    + L HPW+
Sbjct: 242 KRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 286

>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With Adpnp Length = 275

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 90/172 (52%), Gaps = 15/172 (8%)
Query: 58  KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 117
           +K S++ E+  A  + ++    + CH   ++HRD+KPEN L  SA E   LK  DFG S 
Sbjct: 100 QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS- 155
Query: 118 FIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
              P  +  D+ G+  Y+ PE+++ R    + D+WS+GV+ Y  L G+ PF   T    +
Sbjct: 156 VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 215
Query: 177 KEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           K + R +   PDF       ++  A+D + +LL  +P  R    + L HPW+
Sbjct: 216 KRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260

>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A 5-Aminopyrimidinyl Quinazoline Inhibitor Length = 283

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 90/172 (52%), Gaps = 15/172 (8%)
Query: 58  KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 117
           +K S++ E+  A  + ++    + CH   ++HRD+KPEN L  SA E   LK  DFG S 
Sbjct: 105 QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS- 160
Query: 118 FIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
              P  +  D+ G+  Y+ PE+++ R    + D+WS+GV+ Y  L G+ PF   T    +
Sbjct: 161 VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 220
Query: 177 KEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           K + R +   PDF       ++  A+D + +LL  +P  R    + L HPW+
Sbjct: 221 KRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265

>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A Gsk3beta Inhibitor Length = 287

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 90/172 (52%), Gaps = 15/172 (8%)
Query: 58  KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 117
           +K S++ E+  A  + ++    + CH   ++HRD+KPEN L  SA E   LK  DFG S 
Sbjct: 100 QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS- 155
Query: 118 FIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
              P  +  D+ G+  Y+ PE+++ R    + D+WS+GV+ Y  L G+ PF   T    +
Sbjct: 156 VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 215
Query: 177 KEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           K + R +   PDF       ++  A+D + +LL  +P  R    + L HPW+
Sbjct: 216 KRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260

>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A Inhibitors: Structure Basis For Potency And Specificity Length = 279

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 90/172 (52%), Gaps = 15/172 (8%)
Query: 58  KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 117
           +K S++ E+  A  + ++    + CH   ++HRD+KPEN L  SA E   LK  DFG S 
Sbjct: 101 QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS- 156
Query: 118 FIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
              P  +  D+ G+  Y+ PE+++ R    + D+WS+GV+ Y  L G+ PF   T    +
Sbjct: 157 VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 216
Query: 177 KEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           K + R +   PDF       ++  A+D + +LL  +P  R    + L HPW+
Sbjct: 217 KRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261

>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of Pyrazolopyridine- Sulfonamides As Potent Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I) Length = 271

Iteration: 1
 Score = 96.7 bits (239), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 90/172 (52%), Gaps = 15/172 (8%)
Query: 58  KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 117
           +K S++ E+  A  + ++    + CH   ++HRD+KPEN L  SA E   LK  DFG S 
Sbjct: 103 QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS- 158
Query: 118 FIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
              P  +  D+ G+  Y+ PE+++ R    + D+WS+GV+ Y  L G+ PF   T    +
Sbjct: 159 VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 218
Query: 177 KEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           K + R +   PDF       ++  A+D + +LL  +P  R    + L HPW+
Sbjct: 219 KRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263

>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 361

Iteration: 1
 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 93/196 (47%), Gaps = 7/196 (3%)
Query: 33  IVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 92
           I+ P      +    GGEL +RI      R++E +A    +Q++   + CH   + HRD+
Sbjct: 83  ILTPTHLAIVMEYASGGELFERIC--NAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDL 140
Query: 93  KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDV 150
           K EN L   +     LK  DFG S       + +  VG+  Y+APEVL +K   G  +DV
Sbjct: 141 KLENTLLDGSPA-PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADV 199
Query: 151 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRN--KPDFRRKPWPSISNSAKDFVKKLLVK 208
           WS GV  Y++L G  PF D  E   F++ +       +    +  IS   +  + ++ V 
Sbjct: 200 WSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVA 259
Query: 209 DPRARLTAAQALSHPW 224
           DP  R++  +  +H W
Sbjct: 260 DPAKRISIPEIRNHEW 275

>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6 Length = 321

Iteration: 1
 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 101/189 (53%), Gaps = 9/189 (4%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +   +GG L D +      R  E+  A V   +L+  A  H  G++HRD+K ++ L    
Sbjct: 121 MEFLQGGALTDIV---SQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTL- 176
Query: 103 KEDSSLKATDFGLSDFI-KPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYIL 160
             D  +K +DFG    I K   K + +VG+ Y++APEV+ R     E D+WS+G++   +
Sbjct: 177 --DGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEM 234
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           + G  P++  +     K  LR+ P  + K    +S   +DF++++LV+DP+ R TA + L
Sbjct: 235 VDGEPPYFSDSPVQAMKR-LRDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELL 293
Query: 221 SHPWVREGG 229
            HP++ + G
Sbjct: 294 DHPFLLQTG 302

>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6 Length = 362

Iteration: 1
 Score = 96.3 bits (238), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 93/196 (47%), Gaps = 7/196 (3%)
Query: 33  IVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 92
           I+ P      +    GGEL +RI      R++E +A    +Q++   + CH   + HRD+
Sbjct: 84  ILTPTHLAIVMEYASGGELFERIC--NAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDL 141
Query: 93  KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDV 150
           K EN L   +     LK  DFG S       + +  VG+  Y+APEVL +K   G  +DV
Sbjct: 142 KLENTLLDGSPA-PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADV 200
Query: 151 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRN--KPDFRRKPWPSISNSAKDFVKKLLVK 208
           WS GV  Y++L G  PF D  E   F++ +       +    +  IS   +  + ++ V 
Sbjct: 201 WSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVA 260
Query: 209 DPRARLTAAQALSHPW 224
           DP  R++  +  +H W
Sbjct: 261 DPAKRISIPEIRNHEW 276

>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240->arg, Met302- >leu) In Complex With 1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]- Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea Length = 272

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 90/173 (52%), Gaps = 15/173 (8%)
Query: 58  KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 117
           +K SR+ E+  A  + ++    + CH   ++HRD+KPEN L  S  E   LK  DFG S 
Sbjct: 104 QKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGE---LKIADFGWS- 159
Query: 118 FIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
              P  +   + G+  Y+ PE+++ R    + D+WS+GV+ Y  L G  PF   T    +
Sbjct: 160 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETY 219
Query: 177 KEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 226
           + + R +   PDF       ++  A+D + +LL  +   RLT A+ L HPW++
Sbjct: 220 RRISRVEFTFPDF-------VTEGARDLISRLLKHNASQRLTLAEVLEHPWIK 265

>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex With Gold Length = 362

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 59/196 (30%), Positives = 93/196 (47%), Gaps = 7/196 (3%)
Query: 33  IVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 92
           I+ P      +    GGEL +RI      R++E +A    +Q++   + CH   + HRD+
Sbjct: 84  ILTPTHLAIVMEYASGGELFERIC--NAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDL 141
Query: 93  KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDV 150
           K EN L   +     LK   FG S       + +D VG+  Y+APEVL +K   G  +DV
Sbjct: 142 KLENTLLDGSPA-PRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVADV 200
Query: 151 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRN--KPDFRRKPWPSISNSAKDFVKKLLVK 208
           WS GV  Y++L G  PF D  E   F++ +       +    +  IS   +  + ++ V 
Sbjct: 201 WSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVA 260
Query: 209 DPRARLTAAQALSHPW 224
           DP  R++  +  +H W
Sbjct: 261 DPAKRISIPEIRNHEW 276

>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7 Length = 311

Iteration: 1
 Score = 95.9 bits (237), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +   + GELL  I  +K   + E        +++      H  G++HRD+KPEN L    
Sbjct: 108 LSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-- 163
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITY 158
            ED  ++ TDFG +  + P  K       VG+A YV+PE+L  KS  +S D+W++G I Y
Sbjct: 164 -EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 222
Query: 159 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 214
            L+ G  PF    E  IF+++++ + DF  K +P     A+D V+KLLV D   RL
Sbjct: 223 QLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 274

>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor Discovered Through Site-Directed Dynamic Tethering Length = 272

Iteration: 1
 Score = 95.5 bits (236), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 90/173 (52%), Gaps = 15/173 (8%)
Query: 58  KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 117
           +K SR+ E+  A  + ++    + CH   ++HRD+KPEN L  S  E   LK  DFG S 
Sbjct: 104 QKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSNGE---LKIADFGWS- 159
Query: 118 FIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
              P  +   + G+  Y+ PE+++ R    + D+WS+GV+ Y  L G  PF   T    +
Sbjct: 160 VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQETY 219
Query: 177 KEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 226
           + + R +   PDF       ++  A+D + +LL  +   RLT A+ L HPW++
Sbjct: 220 RRISRVEFTFPDF-------VTEGARDLISRLLKHNASQRLTLAEVLEHPWIK 265

>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent Kinase- 1 (Pdk-1)catalytic Domain Bound To A Dibenzonaphthyridine Inhibitor Length = 312

Iteration: 1
 Score = 95.5 bits (236), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +   + GELL  I  +K   + E        +++      H  G++HRD+KPEN L    
Sbjct: 112 LSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-- 167
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKSG-PESDVWSIGVITY 158
            ED  ++ TDFG +  + P  K       VG+A YV+PE+L  KS    SD+W++G I Y
Sbjct: 168 -EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 226
Query: 159 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 214
            L+ G  PF    E  IF+++++ + DF  K +P     A+D V+KLLV D   RL
Sbjct: 227 QLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 278

>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 95.5 bits (236), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +   + GELL  I  +K   + E        +++      H  G++HRD+KPEN L    
Sbjct: 109 LSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-- 164
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKSG-PESDVWSIGVITY 158
            ED  ++ TDFG +  + P  K       VG+A YV+PE+L  KS    SD+W++G I Y
Sbjct: 165 -EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 223
Query: 159 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 214
            L+ G  PF    E  IF+++++ + DF  K +P     A+D V+KLLV D   RL
Sbjct: 224 QLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 275

>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6 Length = 311

Iteration: 1
 Score = 95.5 bits (236), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +   + GELL  I  +K   + E        +++      H  G++HRD+KPEN L    
Sbjct: 108 LSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-- 163
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITY 158
            ED  ++ TDFG +  + P  K       VG+A YV+PE+L  KS  +S D+W++G I Y
Sbjct: 164 -EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 222
Query: 159 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 214
            L+ G  PF    E  IF+++++ + DF  K +P     A+D V+KLLV D   RL
Sbjct: 223 QLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 274

>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Ly333531 Length = 310

Iteration: 1
 Score = 95.5 bits (236), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +   + GELL  I  +K   + E        +++      H  G++HRD+KPEN L    
Sbjct: 109 LSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-- 164
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKSG-PESDVWSIGVITY 158
            ED  ++ TDFG +  + P  K       VG+A YV+PE+L  KS    SD+W++G I Y
Sbjct: 165 -EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 223
Query: 159 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 214
            L+ G  PF    E  IF+++++ + DF  K +P     A+D V+KLLV D   RL
Sbjct: 224 QLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 275

>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 309

Iteration: 1
 Score = 95.5 bits (236), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +   + GELL  I  +K   + E        +++      H  G++HRD+KPEN L    
Sbjct: 109 LSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-- 164
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKSG-PESDVWSIGVITY 158
            ED  ++ TDFG +  + P  K       VG+A YV+PE+L  KS    SD+W++G I Y
Sbjct: 165 -EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 223
Query: 159 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 214
            L+ G  PF    E  IF+++++ + DF  K +P     A+D V+KLLV D   RL
Sbjct: 224 QLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 275

>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric Activator Ps171 Bound To The Pif-Pocket Length = 311

Iteration: 1
 Score = 95.5 bits (236), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +   + GELL  I  +K   + E        +++      H  G++HRD+KPEN L    
Sbjct: 111 LSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-- 166
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITY 158
            ED  ++ TDFG +  + P  K       VG+A YV+PE+L  KS  +S D+W++G I Y
Sbjct: 167 -EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIY 225
Query: 159 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 214
            L+ G  PF    E  IF ++++ + DF  K +P     A+D V+KLLV D   RL
Sbjct: 226 QLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 277

>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3- Phosphoinositide Dependent Kinase (Pdk1) Length = 311

Iteration: 1
 Score = 95.5 bits (236), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +   + GELL  I  +K   + E        +++      H  G++HRD+KPEN L    
Sbjct: 111 LSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-- 166
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITY 158
            ED  ++ TDFG +  + P  K       VG+A YV+PE+L  KS  +S D+W++G I Y
Sbjct: 167 -EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 225
Query: 159 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 214
            L+ G  PF    E  IF+++++ + DF  K +P     A+D V+KLLV D   RL
Sbjct: 226 QLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 277

>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through Fragment-Based Lead Discovery Length = 311

Iteration: 1
 Score = 95.1 bits (235), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +   + GELL  I  +K   + E        +++      H  G++HRD+KPEN L    
Sbjct: 111 LSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-- 166
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITY 158
            ED  ++ TDFG +  + P  K       VG+A YV+PE+L  KS  +S D+W++G I Y
Sbjct: 167 -EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 225
Query: 159 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 214
            L+ G  PF    E  IF+++++ + DF  K +P     A+D V+KLLV D   RL
Sbjct: 226 QLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 277

>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain Length = 310

Iteration: 1
 Score = 95.1 bits (235), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +   + GELL  I  +K   + E        +++      H  G++HRD+KPEN L    
Sbjct: 109 LSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-- 164
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKSG-PESDVWSIGVITY 158
            ED  ++ TDFG +  + P  K       VG+A YV+PE+L  KS    SD+W++G I Y
Sbjct: 165 -EDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 223
Query: 159 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 214
            L+ G  PF    E  IF+++++ + DF  K +P     A+D V+KLLV D   RL
Sbjct: 224 QLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 275

>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i Length = 312

Iteration: 1
 Score = 95.1 bits (235), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +   + GELL  I  +K   + E        +++      H  G++HRD+KPEN L    
Sbjct: 112 LSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-- 167
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITY 158
            ED  ++ TDFG +  + P  K       VG+A YV+PE+L  KS  +S D+W++G I Y
Sbjct: 168 -EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 226
Query: 159 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 214
            L+ G  PF    E  IF+++++ + DF  K +P     A+D V+KLLV D   RL
Sbjct: 227 QLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 278

>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In Complex With Compound 9 Length = 311

Iteration: 1
 Score = 95.1 bits (235), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +   + GELL  I  +K   + E        +++      H  G++HRD+KPEN L    
Sbjct: 111 LSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-- 166
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITY 158
            ED  ++ TDFG +  + P  K       VG+A YV+PE+L  KS  +S D+W++G I Y
Sbjct: 167 -EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 225
Query: 159 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 214
            L+ G  PF    E  IF+++++ + DF  K +P     A+D V+KLLV D   RL
Sbjct: 226 QLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 277

>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300 Length = 280

Iteration: 1
 Score = 95.1 bits (235), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 90/172 (52%), Gaps = 15/172 (8%)
Query: 58  KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 117
           +K S++ E+  A  + ++    + CH   ++HRD+KPEN L  SA E   LK  DFG S 
Sbjct: 100 QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS- 155
Query: 118 FIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
              P  +  ++ G+  Y+ PE+++ R    + D+WS+GV+ Y  L G+ PF   T    +
Sbjct: 156 VHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 215
Query: 177 KEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           K + R +   PDF       ++  A+D + +LL  +P  R    + L HPW+
Sbjct: 216 KRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260

>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead Compound Length = 292

Iteration: 1
 Score = 95.1 bits (235), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +   + GELL  I  +K   + E        +++      H  G++HRD+KPEN L    
Sbjct: 93  LSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-- 148
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITY 158
            ED  ++ TDFG +  + P  K       VG+A YV+PE+L  KS  +S D+W++G I Y
Sbjct: 149 -EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 207
Query: 159 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 214
            L+ G  PF    E  IF+++++ + DF  K +P     A+D V+KLLV D   RL
Sbjct: 208 QLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 259

>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment Inhibitor 1f8 Length = 316

Iteration: 1
 Score = 95.1 bits (235), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 93/176 (52%), Gaps = 13/176 (7%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +   + GELL  I  +K   + E        +++      H  G++HRD+KPEN L    
Sbjct: 116 LSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-- 171
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITY 158
            ED  ++ TDFG +  + P  K       VG+A YV+PE+L  KS  +S D+W++G I Y
Sbjct: 172 -EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 230
Query: 159 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 214
            L+ G  PF    E  IF+++++ + DF  K +P     A+D V+KLLV D   RL
Sbjct: 231 QLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 282

>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain In Complex With Atp Length = 311

Iteration: 1
 Score = 95.1 bits (235), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 62/176 (35%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +   + GELL  I  +K   + E        +++      H  G++HRD+KPEN L    
Sbjct: 111 LSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-- 166
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKSG-PESDVWSIGVITY 158
            ED  ++ TDFG +  + P  K       VG+A YV+PE+L  KS    SD+W++G I Y
Sbjct: 167 -EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 225
Query: 159 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 214
            L+ G  PF    E  IF ++++ + DF  K +P     A+D V+KLLV D   RL
Sbjct: 226 QLVAGLPPFRAGNEGLIFAKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 277

>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017 Length = 268

Iteration: 1
 Score = 94.7 bits (234), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 88/178 (49%), Gaps = 11/178 (6%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +  C GGEL DRI  + D    E DA     Q++      H  G+ HRD+KPEN L    
Sbjct: 83  LEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL--- 137
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVIT 157
            E  +LK +DFGL+   +   +      + G+  YVAPE+LKR+       DVWS G++ 
Sbjct: 138 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 215
             +L G  P WD+  D   +     +      PW  I ++    + K+LV++P AR+T
Sbjct: 198 TAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254

>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor Length = 269

Iteration: 1
 Score = 94.7 bits (234), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 88/178 (49%), Gaps = 11/178 (6%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +  C GGEL DRI  + D    E DA     Q++      H  G+ HRD+KPEN L    
Sbjct: 84  LEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL--- 138
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVIT 157
            E  +LK +DFGL+   +   +      + G+  YVAPE+LKR+       DVWS G++ 
Sbjct: 139 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 215
             +L G  P WD+  D   +     +      PW  I ++    + K+LV++P AR+T
Sbjct: 199 TAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255

>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5 Length = 317

Iteration: 1
 Score = 94.7 bits (234), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 108/207 (52%), Gaps = 15/207 (7%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +   EGG L D +     +R  E+  A V   +LR  +  H  G++HRD+K ++ L  S 
Sbjct: 121 MEFLEGGALTDIV---THTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTS- 176
Query: 103 KEDSSLKATDFGLSDFI-KPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYIL 160
             D  +K +DFG    + K   K + +VG+ Y++APEV+ R   G E D+WS+G++   +
Sbjct: 177 --DGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEM 234
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           + G  P++++      + +  + P  R K    +S+  + F+  +LV++P  R TA + L
Sbjct: 235 IDGEPPYFNEPPLQAMRRIRDSLPP-RVKDLHKVSSVLRGFLDLMLVREPSQRATAQELL 293
Query: 221 SHPWVREGGDASEIPIDISVLNNMRQF 247
            HP+++  G  S       ++  MRQ+
Sbjct: 294 GHPFLKLAGPPS------CIVPLMRQY 314

>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994 Length = 269

Iteration: 1
 Score = 94.7 bits (234), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 88/178 (49%), Gaps = 11/178 (6%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +  C GGEL DRI  + D    E DA     Q++      H  G+ HRD+KPEN L    
Sbjct: 83  LEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL--- 137
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVIT 157
            E  +LK +DFGL+   +   +      + G+  YVAPE+LKR+       DVWS G++ 
Sbjct: 138 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 215
             +L G  P WD+  D   +     +      PW  I ++    + K+LV++P AR+T
Sbjct: 198 TAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254

>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A Pyrrolo-Pyridine Inhibitor Length = 273

Iteration: 1
 Score = 94.7 bits (234), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 88/178 (49%), Gaps = 11/178 (6%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +  C GGEL DRI  + D    E DA     Q++      H  G+ HRD+KPEN L    
Sbjct: 84  LEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL--- 138
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVIT 157
            E  +LK +DFGL+   +   +      + G+  YVAPE+LKR+       DVWS G++ 
Sbjct: 139 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 215
             +L G  P WD+  D   +     +      PW  I ++    + K+LV++P AR+T
Sbjct: 199 TAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255

>pdb|1Z5M|A Chain A, Crystal Structure Of N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl) Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2- Dimethylpropanediamide Complexed With Human Pdk1 Length = 286

Iteration: 1
 Score = 94.7 bits (234), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 62/180 (34%), Positives = 94/180 (52%), Gaps = 13/180 (7%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +   + GELL  I  +K   + E        +++      H  G++HRD+KPEN L    
Sbjct: 86  LSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-- 141
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITY 158
            ED  ++ TDFG +  + P  K       VG+A YV+PE+L  KS  +S D+W++G I Y
Sbjct: 142 -EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 200
Query: 159 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 218
            L+ G  PF    E  IF+++++ + DF  K +P     A+D V+KLLV D   RL   +
Sbjct: 201 QLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRLGCEE 256

>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 94.7 bits (234), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 88/178 (49%), Gaps = 11/178 (6%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +  C GGEL DRI  + D    E DA     Q++      H  G+ HRD+KPEN L    
Sbjct: 83  LEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL--- 137
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVIT 157
            E  +LK +DFGL+   +   +      + G+  YVAPE+LKR+       DVWS G++ 
Sbjct: 138 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 215
             +L G  P WD+  D   +     +      PW  I ++    + K+LV++P AR+T
Sbjct: 198 TAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254

>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8 Length = 286

Iteration: 1
 Score = 94.7 bits (234), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 62/180 (34%), Positives = 94/180 (52%), Gaps = 13/180 (7%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +   + GELL  I  +K   + E        +++      H  G++HRD+KPEN L    
Sbjct: 87  LSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-- 142
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITY 158
            ED  ++ TDFG +  + P  K       VG+A YV+PE+L  KS  +S D+W++G I Y
Sbjct: 143 -EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 201
Query: 159 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 218
            L+ G  PF    E  IF+++++ + DF  K +P     A+D V+KLLV D   RL   +
Sbjct: 202 QLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRLGCEE 257

>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626 Length = 306

Iteration: 1
 Score = 94.7 bits (234), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 15/172 (8%)
Query: 58  KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 117
           +K S++ E+  A  + ++    + CH   ++HRD+KPEN L  SA E   LK  DFG S 
Sbjct: 126 QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS- 181
Query: 118 FIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
              P  +   + G+  Y+ PE+++ R    + D+WS+GV+ Y  L G+ PF   T    +
Sbjct: 182 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 241
Query: 177 KEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           K + R +   PDF       ++  A+D + +LL  +P  R    + L HPW+
Sbjct: 242 KRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 286

>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1 Catalytic Domain Length = 289

Iteration: 1
 Score = 94.7 bits (234), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 62/180 (34%), Positives = 94/180 (52%), Gaps = 13/180 (7%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +   + GELL  I  +K   + E        +++      H  G++HRD+KPEN L    
Sbjct: 89  LSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-- 144
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITY 158
            ED  ++ TDFG +  + P  K       VG+A YV+PE+L  KS  +S D+W++G I Y
Sbjct: 145 -EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 203
Query: 159 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 218
            L+ G  PF    E  IF+++++ + DF  K +P     A+D V+KLLV D   RL   +
Sbjct: 204 QLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRLGCEE 259

>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 94.7 bits (234), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 88/178 (49%), Gaps = 11/178 (6%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +  C GGEL DRI  + D    E DA     Q++      H  G+ HRD+KPEN L    
Sbjct: 83  LEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL--- 137
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVIT 157
            E  +LK +DFGL+   +   +      + G+  YVAPE+LKR+       DVWS G++ 
Sbjct: 138 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 215
             +L G  P WD+  D   +     +      PW  I ++    + K+LV++P AR+T
Sbjct: 198 TAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254

>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1 Length = 278

Iteration: 1
 Score = 94.7 bits (234), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 88/178 (49%), Gaps = 11/178 (6%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +  C GGEL DRI  + D    E DA     Q++      H  G+ HRD+KPEN L    
Sbjct: 82  LEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL--- 136
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVIT 157
            E  +LK +DFGL+   +   +      + G+  YVAPE+LKR+       DVWS G++ 
Sbjct: 137 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 196
Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 215
             +L G  P WD+  D   +     +      PW  I ++    + K+LV++P AR+T
Sbjct: 197 TAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 253

>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding Site Length = 271

Iteration: 1
 Score = 94.7 bits (234), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 88/178 (49%), Gaps = 11/178 (6%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +  C GGEL DRI  + D    E DA     Q++      H  G+ HRD+KPEN L    
Sbjct: 83  LEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL--- 137
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVIT 157
            E  +LK +DFGL+   +   +      + G+  YVAPE+LKR+       DVWS G++ 
Sbjct: 138 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 215
             +L G  P WD+  D   +     +      PW  I ++    + K+LV++P AR+T
Sbjct: 198 TAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254

>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 94.7 bits (234), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 88/178 (49%), Gaps = 11/178 (6%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +  C GGEL DRI  + D    E DA     Q++      H  G+ HRD+KPEN L    
Sbjct: 83  LEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL--- 137
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVIT 157
            E  +LK +DFGL+   +   +      + G+  YVAPE+LKR+       DVWS G++ 
Sbjct: 138 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 215
             +L G  P WD+  D   +     +      PW  I ++    + K+LV++P AR+T
Sbjct: 198 TAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254

>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint Kinase Inhibitors - Hit To Lead Exploration Length = 276

Iteration: 1
 Score = 94.7 bits (234), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 88/178 (49%), Gaps = 11/178 (6%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +  C GGEL DRI  + D    E DA     Q++      H  G+ HRD+KPEN L    
Sbjct: 84  LEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL--- 138
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVIT 157
            E  +LK +DFGL+   +   +      + G+  YVAPE+LKR+       DVWS G++ 
Sbjct: 139 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 215
             +L G  P WD+  D   +     +      PW  I ++    + K+LV++P AR+T
Sbjct: 199 TAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255

>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54 Length = 323

Iteration: 1
 Score = 94.7 bits (234), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 88/178 (49%), Gaps = 11/178 (6%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +  C GGEL DRI  + D    E DA     Q++      H  G+ HRD+KPEN L    
Sbjct: 84  LEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL--- 138
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVIT 157
            E  +LK +DFGL+   +   +      + G+  YVAPE+LKR+       DVWS G++ 
Sbjct: 139 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 215
             +L G  P WD+  D   +     +      PW  I ++    + K+LV++P AR+T
Sbjct: 199 TAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255

>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine- Threonine Kinase Length = 297

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 15/172 (8%)
Query: 58  KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 117
           +K S++ E+  A  + ++    + CH   ++HRD+KPEN L  SA E   LK  DFG S 
Sbjct: 117 QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS- 172
Query: 118 FIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
              P  +   + G+  Y+ PE+++ R    + D+WS+GV+ Y  L G+ PF   T    +
Sbjct: 173 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 232
Query: 177 KEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           K + R +   PDF       ++  A+D + +LL  +P  R    + L HPW+
Sbjct: 233 KRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 277

>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With Bim-3 Length = 286

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/180 (34%), Positives = 94/180 (52%), Gaps = 13/180 (7%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +   + GELL  I  +K   + E        +++      H  G++HRD+KPEN L    
Sbjct: 88  LSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-- 143
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITY 158
            ED  ++ TDFG +  + P  K       VG+A YV+PE+L  KS  +S D+W++G I Y
Sbjct: 144 -EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 202
Query: 159 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 218
            L+ G  PF    E  IF+++++ + DF  K +P     A+D V+KLLV D   RL   +
Sbjct: 203 QLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRLGCEE 258

>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human Chk1 Kinase Domain Length = 273

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 88/178 (49%), Gaps = 11/178 (6%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +  C GGEL DRI  + D    E DA     Q++      H  G+ HRD+KPEN L    
Sbjct: 83  LEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL--- 137
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVIT 157
            E  +LK +DFGL+   +   +      + G+  YVAPE+LKR+       DVWS G++ 
Sbjct: 138 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 215
             +L G  P WD+  D   +     +      PW  I ++    + K+LV++P AR+T
Sbjct: 198 TAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254

>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20 Length = 322

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 88/178 (49%), Gaps = 11/178 (6%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +  C GGEL DRI  + D    E DA     Q++      H  G+ HRD+KPEN L    
Sbjct: 83  LEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL--- 137
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVIT 157
            E  +LK +DFGL+   +   +      + G+  YVAPE+LKR+       DVWS G++ 
Sbjct: 138 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 215
             +L G  P WD+  D   +     +      PW  I ++    + K+LV++P AR+T
Sbjct: 198 TAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254

>pdb|4FST|A Chain A, Crystal Structure Of The Chk1 Length = 269

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 88/178 (49%), Gaps = 11/178 (6%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +  C GGEL DRI  + D    E DA     Q++      H  G+ HRD+KPEN L    
Sbjct: 83  LEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL--- 137
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVIT 157
            E  +LK +DFGL+   +   +      + G+  YVAPE+LKR+       DVWS G++ 
Sbjct: 138 DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 215
             +L G  P WD+  D   +     +      PW  I ++    + K+LV++P AR+T
Sbjct: 198 TAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254

>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights Into Hydrogen Bonding And Protein-Ligand Affinity Length = 297

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 88/178 (49%), Gaps = 11/178 (6%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +  C GGEL DRI  + D    E DA     Q++      H  G+ HRD+KPEN L    
Sbjct: 84  LEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL--- 138
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVIT 157
            E  +LK +DFGL+   +   +      + G+  YVAPE+LKR+       DVWS G++ 
Sbjct: 139 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 215
             +L G  P WD+  D   +     +      PW  I ++    + K+LV++P AR+T
Sbjct: 199 TAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255

>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint Kinase Chk1 Length = 289

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 88/178 (49%), Gaps = 11/178 (6%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +  C GGEL DRI  + D    E DA     Q++      H  G+ HRD+KPEN L    
Sbjct: 84  LEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL--- 138
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVIT 157
            E  +LK +DFGL+   +   +      + G+  YVAPE+LKR+       DVWS G++ 
Sbjct: 139 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 215
             +L G  P WD+  D   +     +      PW  I ++    + K+LV++P AR+T
Sbjct: 199 TAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255

>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine Analog Length = 295

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 88/178 (49%), Gaps = 11/178 (6%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +  C GGEL DRI  + D    E DA     Q++      H  G+ HRD+KPEN L    
Sbjct: 84  LEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL--- 138
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVIT 157
            E  +LK +DFGL+   +   +      + G+  YVAPE+LKR+       DVWS G++ 
Sbjct: 139 DERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 215
             +L G  P WD+  D   +     +      PW  I ++    + K+LV++P AR+T
Sbjct: 199 TAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255

>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 88/178 (49%), Gaps = 11/178 (6%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +  C GGEL DRI  + D    E DA     Q++      H  G+ HRD+KPEN L    
Sbjct: 83  LEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL--- 137
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVIT 157
            E  +LK +DFGL+   +   +      + G+  YVAPE+LKR+       DVWS G++ 
Sbjct: 138 DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 215
             +L G  P WD+  D   +     +      PW  I ++    + K+LV++P AR+T
Sbjct: 198 TAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254

>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine Inhibitor Length = 283

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 15/172 (8%)
Query: 58  KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 117
           +K S++ E+  A  + ++    + CH   ++HRD+KPEN L  SA E   LK  DFG S 
Sbjct: 103 QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS- 158
Query: 118 FIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
              P  +   + G+  Y+ PE+++ R    + D+WS+GV+ Y  L G+ PF   T    +
Sbjct: 159 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 218
Query: 177 KEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           K + R +   PDF       ++  A+D + +LL  +P  R    + L HPW+
Sbjct: 219 KRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263

>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor Length = 285

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 15/172 (8%)
Query: 58  KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 117
           +K S++ E+  A  + ++    + CH   ++HRD+KPEN L  SA E   LK  DFG S 
Sbjct: 105 QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS- 160
Query: 118 FIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
              P  +   + G+  Y+ PE+++ R    + D+WS+GV+ Y  L G+ PF   T    +
Sbjct: 161 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 220
Query: 177 KEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           K + R +   PDF       ++  A+D + +LL  +P  R    + L HPW+
Sbjct: 221 KRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265

>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By Structure Based Design And Optimization Of Thiophene Carboxamide Ureas Length = 276

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 88/178 (49%), Gaps = 11/178 (6%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +  C GGEL DRI  + D    E DA     Q++      H  G+ HRD+KPEN L    
Sbjct: 84  LEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL--- 138
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVIT 157
            E  +LK +DFGL+   +   +      + G+  YVAPE+LKR+       DVWS G++ 
Sbjct: 139 DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVL 198
Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 215
             +L G  P WD+  D   +     +      PW  I ++    + K+LV++P AR+T
Sbjct: 199 TAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 255

>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358 Length = 280

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 15/172 (8%)
Query: 58  KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 117
           +K S++ E+  A  + ++    + CH   ++HRD+KPEN L  SA E   LK  DFG S 
Sbjct: 100 QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS- 155
Query: 118 FIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
              P  +   + G+  Y+ PE+++ R    + D+WS+GV+ Y  L G+ PF   T    +
Sbjct: 156 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 215
Query: 177 KEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           K + R +   PDF       ++  A+D + +LL  +P  R    + L HPW+
Sbjct: 216 KRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260

>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 94.4 bits (233), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 88/178 (49%), Gaps = 11/178 (6%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +  C GGEL DRI  + D    E DA     Q++      H  G+ HRD+KPEN L    
Sbjct: 83  LEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL--- 137
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVIT 157
            E  +LK +DFGL+   +   +      + G+  YVAPE+LKR+       DVWS G++ 
Sbjct: 138 DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 215
             +L G  P WD+  D   +     +      PW  I ++    + K+LV++P AR+T
Sbjct: 198 TAMLAGELP-WDQPSDSCQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254

>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase Length = 272

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 15/172 (8%)
Query: 58  KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 117
           +K S++ E+  A  + ++    + CH   ++HRD+KPEN L  SA E   LK  DFG S 
Sbjct: 104 QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS- 159
Query: 118 FIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
              P  +   + G+  Y+ PE+++ R    + D+WS+GV+ Y  L G+ PF   T    +
Sbjct: 160 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 219
Query: 177 KEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           K + R +   PDF       ++  A+D + +LL  +P  R    + L HPW+
Sbjct: 220 KRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 264

>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant Length = 262

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 15/172 (8%)
Query: 58  KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 117
           +K S++ E+  A  + ++    + CH   ++HRD+KPEN L  SA E   LK  DFG S 
Sbjct: 97  QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSV 153
Query: 118 FIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
              P  +   + G+  Y+ PE+++ R    + D+WS+GV+ Y  L G+ PF   T    +
Sbjct: 154 H-APSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 212
Query: 177 KEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           K + R +   PDF       ++  A+D + +LL  +P  R    + L HPW+
Sbjct: 213 KRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 257

>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form) Length = 285

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 15/172 (8%)
Query: 58  KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 117
           +K S++ E+  A  + ++    + CH   ++HRD+KPEN L  SA E   LK  DFG S 
Sbjct: 105 QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS- 160
Query: 118 FIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
              P  +   + G+  Y+ PE+++ R    + D+WS+GV+ Y  L G+ PF   T    +
Sbjct: 161 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 220
Query: 177 KEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           K + R +   PDF       ++  A+D + +LL  +P  R    + L HPW+
Sbjct: 221 KRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265

>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1 Length = 279

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/178 (33%), Positives = 88/178 (49%), Gaps = 11/178 (6%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +  C GGEL DRI  + D    E DA     Q++      H  G+ HRD+KPEN L    
Sbjct: 83  LEYCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLL--- 137
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVIT 157
            E  +LK +DFGL+   +   +      + G+  YVAPE+LKR+       DVWS G++ 
Sbjct: 138 DERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVL 197
Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 215
             +L G  P WD+  D   +     +      PW  I ++    + K+LV++P AR+T
Sbjct: 198 TAMLAGELP-WDQPSDSXQEYSDWKEKKTYLNPWKKIDSAPLALLHKILVENPSARIT 254

>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa Length = 267

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 15/172 (8%)
Query: 58  KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 117
           +K S++ E+  A  + ++    + CH   ++HRD+KPEN L  SA E   LK  DFG S 
Sbjct: 99  QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS- 154
Query: 118 FIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
              P  +   + G+  Y+ PE+++ R    + D+WS+GV+ Y  L G+ PF   T    +
Sbjct: 155 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 214
Query: 177 KEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           K + R +   PDF       ++  A+D + +LL  +P  R    + L HPW+
Sbjct: 215 KRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 259

>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287, Thr288 And Bound To Tpx2 1-43 Length = 282

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 15/172 (8%)
Query: 58  KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 117
           +K S++ E+  A  + ++    + CH   ++HRD+KPEN L  SA E   LK  DFG S 
Sbjct: 102 QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS- 157
Query: 118 FIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
              P  +   + G+  Y+ PE+++ R    + D+WS+GV+ Y  L G+ PF   T    +
Sbjct: 158 VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 217
Query: 177 KEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           K + R +   PDF       ++  A+D + +LL  +P  R    + L HPW+
Sbjct: 218 KRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 262

>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A Pentacyclic Inhibitor Length = 268

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 15/172 (8%)
Query: 58  KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 117
           +K S++ E+  A  + ++    + CH   ++HRD+KPEN L  SA E   LK  DFG S 
Sbjct: 100 QKLSKFDEQRTATYITELANALSYCHSKKVIHRDIKPENLLLGSAGE---LKIADFGWS- 155
Query: 118 FIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
              P  +   + G+  Y+ PE+++ R    + D+WS+GV+ Y  L G+ PF   T    +
Sbjct: 156 VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTY 215
Query: 177 KEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           K + R +   PDF       ++  A+D + +LL  +P  R    + L HPW+
Sbjct: 216 KRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260

>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679 Length = 279

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 15/172 (8%)
Query: 58  KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 117
           +K S++ E+  A  + ++    + CH   ++HRD+KPEN L  SA E   LK  DFG S 
Sbjct: 101 QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS- 156
Query: 118 FIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
              P  +   + G+  Y+ PE+++ R    + D+WS+GV+ Y  L G+ PF   T    +
Sbjct: 157 VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 216
Query: 177 KEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           K + R +   PDF       ++  A+D + +LL  +P  R    + L HPW+
Sbjct: 217 KRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261

>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 94.0 bits (232), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 15/172 (8%)
Query: 58  KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 117
           +K S++ E+  A  + ++    + CH   ++HRD+KPEN L  SA E   LK  DFG S 
Sbjct: 103 QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS- 158
Query: 118 FIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
              P  +   + G+  Y+ PE+++ R    + D+WS+GV+ Y  L G+ PF   T    +
Sbjct: 159 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 218
Query: 177 KEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           K + R +   PDF       ++  A+D + +LL  +P  R    + L HPW+
Sbjct: 219 KRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263

>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And Tpx2 Length = 268

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 15/172 (8%)
Query: 58  KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 117
           +K S++ E+  A  + ++    + CH   ++HRD+KPEN L  SA E   LK  DFG S 
Sbjct: 100 QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS- 155
Query: 118 FIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
              P  +   + G+  Y+ PE+++ R    + D+WS+GV+ Y  L G+ PF   T    +
Sbjct: 156 VHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 215
Query: 177 KEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           K + R +   PDF       ++  A+D + +LL  +P  R    + L HPW+
Sbjct: 216 KRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260

>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And Compound 10 Length = 268

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 15/172 (8%)
Query: 58  KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 117
           +K S++ E+  A  + ++    + CH   ++HRD+KPEN L  SA E   LK  DFG S 
Sbjct: 100 QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS- 155
Query: 118 FIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
              P  +   + G+  Y+ PE+++ R    + D+WS+GV+ Y  L G+ PF   T    +
Sbjct: 156 VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 215
Query: 177 KEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           K + R +   PDF       ++  A+D + +LL  +P  R    + L HPW+
Sbjct: 216 KRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260

>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With Inhibitor Length = 275

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 15/172 (8%)
Query: 58  KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 117
           +K S++ E+  A  + ++    + CH   ++HRD+KPEN L  SA E   LK  DFG S 
Sbjct: 103 QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS- 158
Query: 118 FIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
              P  +   + G+  Y+ PE+++ R    + D+WS+GV+ Y  L G+ PF   T    +
Sbjct: 159 VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 218
Query: 177 KEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           K + R +   PDF       ++  A+D + +LL  +P  R    + L HPW+
Sbjct: 219 KRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263

>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors Length = 283

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 15/172 (8%)
Query: 58  KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 117
           +K S++ E+  A  + ++    + CH   ++HRD+KPEN L  SA E   LK  DFG S 
Sbjct: 103 QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS- 158
Query: 118 FIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIF 176
              P  +   + G+  Y+ PE+++ +   E  D+WS+GV+ Y  L G+ PF   T    +
Sbjct: 159 VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 218
Query: 177 KEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           K + R +   PDF       ++  A+D + +LL  +P  R    + L HPW+
Sbjct: 219 KRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263

>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A Diaminopyrimidine Length = 281

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 15/172 (8%)
Query: 58  KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 117
           +K S++ E+  A  + ++    + CH   ++HRD+KPEN L  SA E   LK  DFG S 
Sbjct: 101 QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWSC 157
Query: 118 FIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
              P  +   + G+  Y+ PE+++ R    + D+WS+GV+ Y  L G+ PF   T    +
Sbjct: 158 H-APSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 216
Query: 177 KEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           K + R +   PDF       ++  A+D + +LL  +P  R    + L HPW+
Sbjct: 217 KRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 261

>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp Length = 285

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 88/172 (51%), Gaps = 15/172 (8%)
Query: 58  KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 117
           +K S++ E+  A  + ++    + CH   ++HRD+KPEN L  SA E   LK  DFG S 
Sbjct: 105 QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS- 160
Query: 118 FIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIF 176
              P  +   + G+  Y+ PE ++ +   E  D+WS+GV+ Y  L G+ PF   T    +
Sbjct: 161 VHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 220
Query: 177 KEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           K + R +   PDF       ++  A+D + +LL  +P  R    + L HPW+
Sbjct: 221 KRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPXLREVLEHPWI 265

>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure Length = 285

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 15/172 (8%)
Query: 58  KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 117
           +K S++ E+  A  + ++    + CH   ++HRD+KPEN L  SA E   LK  DFG S 
Sbjct: 105 QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS- 160
Query: 118 FIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
              P  +   + G+  Y+ PE+++ R    + D+WS+GV+ Y  L G+ PF   T    +
Sbjct: 161 VHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 220
Query: 177 KEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           K + R +   PDF       ++  A+D + +LL  +P  R    + L HPW+
Sbjct: 221 KRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 265

>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase Length = 362

Iteration: 1
 Score = 93.6 bits (231), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 92/196 (46%), Gaps = 7/196 (3%)
Query: 33  IVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 92
           I+ P      +    GGEL +RI      R++E +A    +Q++   + CH   + HRD+
Sbjct: 84  ILTPTHLAIVMEYASGGELFERIC--NAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDL 141
Query: 93  KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDV 150
           K EN L   +     LK   FG S       + +  VG+  Y+APEVL +K   G  +DV
Sbjct: 142 KLENTLLDGSPA-PRLKICAFGYSKSSVLHSQPKSTVGTPAYIAPEVLLKKEYDGKVADV 200
Query: 151 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRN--KPDFRRKPWPSISNSAKDFVKKLLVK 208
           WS GV  Y++L G  PF D  E   F++ +       +    +  IS   +  + ++ V 
Sbjct: 201 WSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVA 260
Query: 209 DPRARLTAAQALSHPW 224
           DP  R++  +  +H W
Sbjct: 261 DPAKRISIPEIRNHEW 276

>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine Length = 268

Iteration: 1
 Score = 93.2 bits (230), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 89/172 (51%), Gaps = 15/172 (8%)
Query: 58  KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 117
           +K S++ E+  A  + ++    + CH   ++HRD+KPEN L  SA E   LK  DFG S 
Sbjct: 100 QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIADFGWS- 155
Query: 118 FIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
              P  +   + G+  Y+ PE+++ R    + D+WS+GV+ Y  L G+ PF   T    +
Sbjct: 156 VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 215
Query: 177 KEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           K + R +   PDF       ++  A+D + +LL  +P  R    + L HPW+
Sbjct: 216 KRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 260

>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx Length = 314

Iteration: 1
 Score = 93.2 bits (230), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 91/176 (51%), Gaps = 13/176 (7%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +   + GELL  I  +K   + E        +++      H  G++HRD+KPEN L    
Sbjct: 114 LSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-- 169
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKSG-PESDVWSIGVITY 158
            ED  ++ TDFG +  + P  K       VG+A YV+PE+L  KS    SD+W++G I Y
Sbjct: 170 -EDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIY 228
Query: 159 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 214
            L+ G  PF    E  IF+++++ + DF    +P     A+D V+KLLV D   RL
Sbjct: 229 QLVAGLPPFRAGNEYLIFQKIIKLEYDFPAAFFP----KARDLVEKLLVLDATKRL 280

>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human Pdk1 Complex 2 Length = 311

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 61/176 (34%), Positives = 92/176 (52%), Gaps = 13/176 (7%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +   + G LL  I  +K   + E        +++      H  G++HRD+KPEN L    
Sbjct: 111 LSYAKNGCLLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN-- 166
Query: 103 KEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITY 158
            ED  ++ TDFG +  + P  K       VG+A YV+PE+L  KS  +S D+W++G I Y
Sbjct: 167 -EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIY 225
Query: 159 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 214
            L+ G  PF    E  IF+++++ + DF  K +P     A+D V+KLLV D   RL
Sbjct: 226 QLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP----KARDLVEKLLVLDATKRL 277

>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a Length = 282

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 89/172 (51%), Gaps = 15/172 (8%)
Query: 58  KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 117
           +K S++ E+  A  + ++    + CH   ++HRD+KPEN L  SA E   LK  +FG S 
Sbjct: 102 QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIANFGWS- 157
Query: 118 FIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
              P  +   + G+  Y+ PE+++ R    + D+WS+GV+ Y  L G+ PF   T    +
Sbjct: 158 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 217
Query: 177 KEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           K + R +   PDF       ++  A+D + +LL  +P  R    + L HPW+
Sbjct: 218 KRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 262

>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine Inhibitor Length = 272

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 89/172 (51%), Gaps = 15/172 (8%)
Query: 58  KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 117
           +K S++ E+  A  + ++    + CH   ++HRD+KPEN L  SA E   LK  +FG S 
Sbjct: 103 QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGE---LKIANFGWS- 158
Query: 118 FIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
              P  +   + G+  Y+ PE+++ R    + D+WS+GV+ Y  L G+ PF   T    +
Sbjct: 159 VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETY 218
Query: 177 KEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           K + R +   PDF       ++  A+D + +LL  +P  R    + L HPW+
Sbjct: 219 KRISRVEFTFPDF-------VTEGARDLISRLLKHNPSQRPMLREVLEHPWI 263

>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3 Length = 361

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 62/201 (30%), Positives = 95/201 (47%), Gaps = 17/201 (8%)
Query: 33  IVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 92
           I+ P      +    GGEL +RI      R++E +A    +Q+L   + CH   + HRD+
Sbjct: 85  ILTPTHLAIIMEYASGGELYERIC--NAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDL 142
Query: 93  KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDV 150
           K EN L   +     LK  DFG S       + +  VG+  Y+APEVL R+   G  +DV
Sbjct: 143 KLENTLLDGSPA-PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADV 201
Query: 151 WSIGVITYILLCGRRPFWDKTEDGIFKEVLR-------NKPDFRRKPWPSISNSAKDFVK 203
           WS GV  Y++L G  PF D  E   +++ ++       + PD  R     IS      + 
Sbjct: 202 WSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIR-----ISPECCHLIS 256
Query: 204 KLLVKDPRARLTAAQALSHPW 224
           ++ V DP  R++  +  +H W
Sbjct: 257 RIFVADPATRISIPEIKTHSW 277

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 92.0 bits (227), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 32/205 (15%)
Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           L ++L +  +   +    + + Q+LR  A CH H ++HRD+KP+N L  S   D +LK  
Sbjct: 105 LKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINS---DGALKLA 161
Query: 112 DFGLS-DFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW 168
           DFGL+  F  P + +   V + +Y AP+VL   +K     D+WSIG I   ++ G+  F 
Sbjct: 162 DFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFP 221
Query: 169 DKTEDGIFKEVL----------------------RNKPDFRRKPW----PSISNSAKDFV 202
             T+D    ++                       R    F +KPW    P       D +
Sbjct: 222 GVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLL 281
Query: 203 KKLLVKDPRARLTAAQALSHPWVRE 227
             +L  DP  R++A  A++HP+ ++
Sbjct: 282 SNMLCFDPNKRISARDAMNHPYFKD 306

>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6 Length = 317

Iteration: 1
 Score = 91.7 bits (226), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 58/196 (29%), Positives = 92/196 (46%), Gaps = 7/196 (3%)
Query: 33  IVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 92
           I+ P      +    GGEL +RI      R++E +A    +Q++   +  H   + HRD+
Sbjct: 84  ILTPTHLAIVMEYASGGELFERIC--NAGRFSEDEARFFFQQLISGVSYAHAMQVAHRDL 141
Query: 93  KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDV 150
           K EN L   +     LK  DFG S       + +  VG+  Y+APEVL +K   G  +DV
Sbjct: 142 KLENTLLDGSPA-PRLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADV 200
Query: 151 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRN--KPDFRRKPWPSISNSAKDFVKKLLVK 208
           WS GV  Y++L G  PF D  E   F++ +       +    +  IS   +  + ++ V 
Sbjct: 201 WSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYAIPDYVHISPECRHLISRIFVA 260
Query: 209 DPRARLTAAQALSHPW 224
           DP  R++  +  +H W
Sbjct: 261 DPAKRISIPEIRNHEW 276

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 91.7 bits (226), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 95/205 (46%), Gaps = 32/205 (15%)
Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           L ++L +  +   +    + + Q+LR  A CH H ++HRD+KP+N L  S   D +LK  
Sbjct: 105 LKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINS---DGALKLA 161
Query: 112 DFGLS-DFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW 168
           DFGL+  F  P + +   V + +Y AP+VL   +K     D+WSIG I   ++ G+  F 
Sbjct: 162 DFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFP 221
Query: 169 DKTEDGIFKEVL----------------------RNKPDFRRKPW----PSISNSAKDFV 202
             T+D    ++                       R    F +KPW    P       D +
Sbjct: 222 GVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLL 281
Query: 203 KKLLVKDPRARLTAAQALSHPWVRE 227
             +L  DP  R++A  A++HP+ ++
Sbjct: 282 SNMLCFDPNKRISARDAMNHPYFKD 306

>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With Nms-P937 Length = 311

Iteration: 1
 Score = 88.2 bits (217), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 100/197 (50%), Gaps = 13/197 (6%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + LC    LL+  L K+    TE +A   +RQ++      H + ++HRD+K  N      
Sbjct: 96  LELCRRRSLLE--LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN-- 151
Query: 103 KEDSSLKATDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITYIL 160
            ED  +K  DFGL+  ++  G++ + + G+  Y+APEVL +K    E DVWSIG I Y L
Sbjct: 152 -EDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL 210
Query: 161 LCGRRPFWDKTEDGIFKEV-LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA 219
           L G+ PF    E    KE  LR K +    P   I+  A   ++K+L  DP AR T  + 
Sbjct: 211 LVGKPPF----ETSCLKETYLRIKKNEYSIPK-HINPVAASLIQKMLQTDPTARPTINEL 265
Query: 220 LSHPWVREGGDASEIPI 236
           L+  +   G   + +PI
Sbjct: 266 LNDEFFTSGYIPARLPI 282

>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A Pyrazoloquinazoline Inhibitor Length = 311

Iteration: 1
 Score = 88.2 bits (217), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 100/197 (50%), Gaps = 13/197 (6%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + LC    LL+  L K+    TE +A   +RQ++      H + ++HRD+K  N      
Sbjct: 96  LELCRRRSLLE--LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN-- 151
Query: 103 KEDSSLKATDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITYIL 160
            ED  +K  DFGL+  ++  G++ + + G+  Y+APEVL +K    E DVWSIG I Y L
Sbjct: 152 -EDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL 210
Query: 161 LCGRRPFWDKTEDGIFKEV-LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA 219
           L G+ PF    E    KE  LR K +    P   I+  A   ++K+L  DP AR T  + 
Sbjct: 211 LVGKPPF----ETSCLKETYLRIKKNEYSIPK-HINPVAASLIQKMLQTDPTARPTINEL 265
Query: 220 LSHPWVREGGDASEIPI 236
           L+  +   G   + +PI
Sbjct: 266 LNDEFFTSGYIPARLPI 282

>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 315

Iteration: 1
 Score = 88.2 bits (217), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 100/197 (50%), Gaps = 13/197 (6%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + LC    LL+  L K+    TE +A   +RQ++      H + ++HRD+K  N      
Sbjct: 100 LELCRRRSLLE--LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN-- 155
Query: 103 KEDSSLKATDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITYIL 160
            ED  +K  DFGL+  ++  G++ + + G+  Y+APEVL +K    E DVWSIG I Y L
Sbjct: 156 -EDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL 214
Query: 161 LCGRRPFWDKTEDGIFKEV-LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA 219
           L G+ PF    E    KE  LR K +    P   I+  A   ++K+L  DP AR T  + 
Sbjct: 215 LVGKPPF----ETSCLKETYLRIKKNEYSIPK-HINPVAASLIQKMLQTDPTARPTINEL 269
Query: 220 LSHPWVREGGDASEIPI 236
           L+  +   G   + +PI
Sbjct: 270 LNDEFFTSGYIPARLPI 286

>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain Length = 339

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 93/182 (51%), Gaps = 17/182 (9%)
Query: 44  RLC------EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 97
           RLC       GGEL   +   ++  +TE+ A     +++      H   +V+RD+K EN 
Sbjct: 82  RLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENL 139
Query: 98  LFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGV 155
           +     +D  +K TDFGL  + I  G   +   G+  Y+APEVL+    G   D W +GV
Sbjct: 140 MLD---KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 196
Query: 156 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 215
           + Y ++CGR PF+++  + +F+ +L  +  F R    ++S  AK  +  LL KDP+ RL 
Sbjct: 197 VMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLG 252
Query: 216 AA 217
Sbjct: 253 GG 254

>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 342

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 93/182 (51%), Gaps = 17/182 (9%)
Query: 44  RLC------EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 97
           RLC       GGEL   +   ++  +TE+ A     +++      H   +V+RD+K EN 
Sbjct: 84  RLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENL 141
Query: 98  LFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGV 155
           +     +D  +K TDFGL  + I  G   +   G+  Y+APEVL+    G   D W +GV
Sbjct: 142 MLD---KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 198
Query: 156 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 215
           + Y ++CGR PF+++  + +F+ +L  +  F R    ++S  AK  +  LL KDP+ RL 
Sbjct: 199 VMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLG 254
Query: 216 AA 217
Sbjct: 255 GG 256

>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain Length = 335

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 93/182 (51%), Gaps = 17/182 (9%)
Query: 44  RLC------EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 97
           RLC       GGEL   +   ++  +TE+ A     +++      H   +V+RD+K EN 
Sbjct: 79  RLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENL 136
Query: 98  LFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGV 155
           +     +D  +K TDFGL  + I  G   +   G+  Y+APEVL+    G   D W +GV
Sbjct: 137 MLD---KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 193
Query: 156 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 215
           + Y ++CGR PF+++  + +F+ +L  +  F R    ++S  AK  +  LL KDP+ RL 
Sbjct: 194 VMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLG 249
Query: 216 AA 217
Sbjct: 250 GG 251

>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B Akt By Hydrophobic Motif Phosphorylation Length = 315

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 93/182 (51%), Gaps = 17/182 (9%)
Query: 44  RLC------EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 97
           RLC       GGEL   +   ++  +TE+ A     +++      H   +V+RD+K EN 
Sbjct: 79  RLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENL 136
Query: 98  LFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGV 155
           +     +D  +K TDFGL  + I  G   +   G+  Y+APEVL+    G   D W +GV
Sbjct: 137 MLD---KDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 193
Query: 156 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 215
           + Y ++CGR PF+++  + +F+ +L  +  F R    ++S  AK  +  LL KDP+ RL 
Sbjct: 194 VMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLG 249
Query: 216 AA 217
Sbjct: 250 GG 251

>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B (pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3 Peptide Length = 337

Iteration: 1
 Score = 87.8 bits (216), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 93/182 (51%), Gaps = 17/182 (9%)
Query: 44  RLC------EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 97
           RLC       GGEL   +   ++  +TE+ A     +++      H   +V+RD+K EN 
Sbjct: 79  RLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENL 136
Query: 98  LFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGV 155
           +     +D  +K TDFGL  + I  G   +   G+  Y+APEVL+    G   D W +GV
Sbjct: 137 MLD---KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 193
Query: 156 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 215
           + Y ++CGR PF+++  + +F+ +L  +  F R    ++S  AK  +  LL KDP+ RL 
Sbjct: 194 VMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLG 249
Query: 216 AA 217
Sbjct: 250 GG 251

>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d With Gsk3 Peptide And Amp-Pnp Length = 336

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 93/182 (51%), Gaps = 17/182 (9%)
Query: 44  RLC------EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 97
           RLC       GGEL   +   ++  +TE+ A     +++      H   +V+RD+K EN 
Sbjct: 79  RLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENL 136
Query: 98  LFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGV 155
           +     +D  +K TDFGL  + I  G   +   G+  Y+APEVL+    G   D W +GV
Sbjct: 137 MLD---KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 193
Query: 156 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 215
           + Y ++CGR PF+++  + +F+ +L  +  F R    ++S  AK  +  LL KDP+ RL 
Sbjct: 194 VMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLG 249
Query: 216 AA 217
Sbjct: 250 GG 251

>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex With Atp- Competitive Inhibitors Length = 335

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/182 (31%), Positives = 93/182 (51%), Gaps = 17/182 (9%)
Query: 44  RLC------EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 97
           RLC       GGEL   +   ++  +TE+ A     +++      H   +V+RD+K EN 
Sbjct: 79  RLCFVMEYANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENL 136
Query: 98  LFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGV 155
           +     +D  +K TDFGL  + I  G   +   G+  Y+APEVL+    G   D W +GV
Sbjct: 137 MLD---KDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGV 193
Query: 156 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 215
           + Y ++CGR PF+++  + +F+ +L  +  F R    ++S  AK  +  LL KDP+ RL 
Sbjct: 194 VMYEMMCGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLG 249
Query: 216 AA 217
Sbjct: 250 GG 251

>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536 Length = 294

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 100/197 (50%), Gaps = 13/197 (6%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + LC    LL+  L K+    TE +A   +RQ++      H + ++HRD+K  N      
Sbjct: 94  LELCRRRSLLE--LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN-- 149
Query: 103 KEDSSLKATDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITYIL 160
            ED  +K  DFGL+  ++  G++ + + G+  Y+APEVL +K    E DVWSIG I Y L
Sbjct: 150 -EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL 208
Query: 161 LCGRRPFWDKTEDGIFKEV-LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA 219
           L G+ PF    E    KE  LR K +    P   I+  A   ++K+L  DP AR T  + 
Sbjct: 209 LVGKPPF----ETSCLKETYLRIKKNEYSIP-KHINPVAASLIQKMLQTDPTARPTINEL 263
Query: 220 LSHPWVREGGDASEIPI 236
           L+  +   G   + +PI
Sbjct: 264 LNDEFFTSGYIPARLPI 280

>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A Benzolactam-Derived Inhibitor Length = 333

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 100/197 (50%), Gaps = 13/197 (6%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + LC    LL+  L K+    TE +A   +RQ++      H + ++HRD+K  N      
Sbjct: 118 LELCRRRSLLE--LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN-- 173
Query: 103 KEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITYIL 160
            ED  +K  DFGL+  ++  G++ + + G+  Y+APEVL +K    E DVWSIG I Y L
Sbjct: 174 -EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL 232
Query: 161 LCGRRPFWDKTEDGIFKEV-LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA 219
           L G+ PF    E    KE  LR K +    P   I+  A   ++K+L  DP AR T  + 
Sbjct: 233 LVGKPPF----ETSCLKETYLRIKKNEYSIPK-HINPVAASLIQKMLQTDPTARPTINEL 287
Query: 220 LSHPWVREGGDASEIPI 236
           L+  +   G   + +PI
Sbjct: 288 LNDEFFTSGYIPARLPI 304

>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like Kinase 1 Length = 335

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/197 (34%), Positives = 100/197 (50%), Gaps = 13/197 (6%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + LC    LL+  L K+    TE +A   +RQ++      H + ++HRD+K  N      
Sbjct: 120 LELCRRRSLLE--LHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN-- 175
Query: 103 KEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITYIL 160
            ED  +K  DFGL+  ++  G++ + + G+  Y+APEVL +K    E DVWSIG I Y L
Sbjct: 176 -EDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL 234
Query: 161 LCGRRPFWDKTEDGIFKEV-LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA 219
           L G+ PF    E    KE  LR K +    P   I+  A   ++K+L  DP AR T  + 
Sbjct: 235 LVGKPPF----ETSCLKETYLRIKKNEYSIPK-HINPVAASLIQKMLQTDPTARPTINEL 289
Query: 220 LSHPWVREGGDASEIPI 236
           L+  +   G   + +PI
Sbjct: 290 LNDEFFTSGYIPARLPI 306

>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680 Length = 292

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 89/179 (49%), Gaps = 11/179 (6%)
Query: 49  GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 108
           GEL   +  +K   + E+  A ++ ++      CH   ++HRD+KPEN           L
Sbjct: 108 GELYKEL--QKSCTFDEQRTATIMEELADALMYCHGKKVIHRDIKPEN---LLLGLKGEL 162
Query: 109 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPF 167
           K  DFG S    P  + + + G+  Y+ PE+++ R    + D+W IGV+ Y LL G  PF
Sbjct: 163 KIADFGWSVH-APSLRRKTMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPF 221
Query: 168 WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 226
              + +  ++ +++    F      S+   A+D + KLL  +P  RL  AQ  +HPWVR
Sbjct: 222 ESASHNETYRRIVKVDLKFP----ASVPTGAQDLISKLLRHNPSERLPLAQVSAHPWVR 276

>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase Length = 197

Iteration: 1
 Score = 87.0 bits (214), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 101/179 (56%), Gaps = 21/179 (11%)
Query: 239 SVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALA 298
           ++L N++ F K + LK+ AL  +A  L D E+ +LR+ F A+DVD +G++S +E+   L 
Sbjct: 25  TLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLK 84
Query: 299 KDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAA--- 355
           K + ++     + ++L+ ID N  G + +++F+AAT+          ++ +L+ +     
Sbjct: 85  K-IGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATI---------DKQTYLKKEVCLIP 134
Query: 356 FEKFDIDRDGFITPEELRMHTG--------LKGSIDPLLEEADIDKDGRISLSEFRRLL 406
           F+ FDID +G I+ EEL+   G        +  +ID LL+E D++ DG I   EF  ++
Sbjct: 135 FKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMM 193

>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The Presence Of Ca2+ And The Junction Domain (Jd) Length = 188

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 88/150 (58%), Gaps = 11/150 (7%)
Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 321
           A  L +EE+  L++ F  ID D +G+I+ +E++  L K +  +L ES + +++ A D + 
Sbjct: 1   AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGL-KRVGSELMESEIKDLMDAADIDK 59
Query: 322 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHT---GL 378
            G +D+ EF+AAT+H+++LE  ++        +AF  FD D  G+IT +E++      GL
Sbjct: 60  SGTIDYGEFIAATVHLNKLEREEN------LVSAFSYFDKDGSGYITLDEIQQACKDFGL 113
Query: 379 KG-SIDPLLEEADIDKDGRISLSEFRRLLR 407
               ID +++E D D DG+I   EF  ++R
Sbjct: 114 DDIHIDDMIKEIDQDNDGQIDYGEFAAMMR 143

>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1 Reveals A Novel Autoinhibitory Conformation For A Dual Kinase Protein Length = 355

Iteration: 1
 Score = 85.5 bits (210), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 61/180 (33%), Positives = 101/180 (56%), Gaps = 26/180 (14%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGEL   +  ++  R+TE +  + V +++      H  G+++RD+K EN L  S   +  
Sbjct: 143 GGELFTHLSQRE--RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDS---NGH 197
Query: 108 LKATDFGLS-DFIK-PGKKFQDIVGSAYYVAPEVLKRK-SGPESDV--WSIGVITYILLC 162
           +  TDFGLS +F+    ++  D  G+  Y+AP++++   SG +  V  WS+GV+ Y LL 
Sbjct: 198 VVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT 257
Query: 163 GRRPFWDKTEDG-------IFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
           G  PF   T DG       I + +L+++P     P+P  +S  AKD +++LL+KDP+ RL
Sbjct: 258 GASPF---TVDGEKNSQAEISRRILKSEP-----PYPQEMSALAKDLIQRLLMKDPKKRL 309

>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase Catalytic Subunit From Saccharomyces Cerevisiae Length = 318

Iteration: 1
 Score = 85.1 bits (209), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 91/188 (48%), Gaps = 17/188 (9%)
Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
            EGGEL    L +K  R+    A     ++       H   +++RD+KPEN L     ++
Sbjct: 88  IEGGELFS--LLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLD---KN 142
Query: 106 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGR 164
             +K TDFG + ++ P   +  + G+  Y+APEV+  K   +S D WS G++ Y +L G 
Sbjct: 143 GHIKITDFGFAKYV-PDVTYX-LCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGY 200
Query: 165 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ-----A 219
            PF+D      ++++L  +  F     P  +   KD + +L+ +D   RL   Q      
Sbjct: 201 TPFYDSNTMKTYEKILNAELRFP----PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDV 256
Query: 220 LSHPWVRE 227
            +HPW +E
Sbjct: 257 KNHPWFKE 264

>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin. Length = 284

Iteration: 1
 Score = 85.1 bits (209), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 87/179 (48%), Gaps = 11/179 (6%)
Query: 49  GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 108
           GEL   +  +K  R+ E+ +A  + ++      CH   ++HRD+KPEN L     E   L
Sbjct: 99  GELYKEL--QKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGE---L 153
Query: 109 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF 167
           K  DFG S    P  + + + G+  Y+ PE+++ K+  E  D+W  GV+ Y  L G  PF
Sbjct: 154 KIADFGWS-VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPF 212
Query: 168 WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 226
              +     + ++     F     P +S+ +KD + KLL   P  RL     + HPWV+
Sbjct: 213 DSPSHTETHRRIVNVDLKFP----PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVK 267

>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439 Length = 285

Iteration: 1
 Score = 84.7 bits (208), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 87/179 (48%), Gaps = 11/179 (6%)
Query: 49  GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 108
           GEL   +  +K  R+ E+ +A  + ++      CH   ++HRD+KPEN L     E   L
Sbjct: 100 GELYKEL--QKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGE---L 154
Query: 109 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF 167
           K  DFG S    P  + + + G+  Y+ PE+++ K+  E  D+W  GV+ Y  L G  PF
Sbjct: 155 KIADFGWS-VHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPF 213
Query: 168 WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 226
              +     + ++     F     P +S+ +KD + KLL   P  RL     + HPWV+
Sbjct: 214 DSPSHTETHRRIVNVDLKFP----PFLSDGSKDLISKLLRYHPPQRLPLKGVMEHPWVK 268

>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363 Length = 340

Iteration: 1
 Score = 84.7 bits (208), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 95/187 (50%), Gaps = 26/187 (13%)
Query: 44  RLC------EGGELL-----DRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 92
           RLC       GGEL      +R+ ++  +R+     A +V  +  + +E     +V+RD+
Sbjct: 82  RLCFVMEYANGGELFFHLSRERVFSEDRARFY---GAEIVSALDYLHSE---KNVVYRDL 135
Query: 93  KPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDV 150
           K EN +     +D  +K TDFGL  + IK G   +   G+  Y+APEVL+    G   D 
Sbjct: 136 KLENLMLD---KDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDW 192
Query: 151 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDP 210
           W +GV+ Y ++CGR PF+++  + +F+ +L  +  F R   P     AK  +  LL KDP
Sbjct: 193 WGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGP----EAKSLLSGLLKKDP 248
Query: 211 RARLTAA 217
           + RL   
Sbjct: 249 KQRLGGG 255

>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase Length = 314

Iteration: 1
 Score = 84.7 bits (208), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 57/194 (29%), Positives = 93/194 (47%), Gaps = 11/194 (5%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +  C  G + D I+  ++   TE + A +++  L+     H    +HRD+K  N L  + 
Sbjct: 103 MEYCGAGSVSD-IIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNT- 160
Query: 103 KEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYIL 160
             +   K  DFG++        K   ++G+ +++APEV++       +D+WS+G+    +
Sbjct: 161 --EGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEM 218
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKP--WPSISNSAKDFVKKLLVKDPRARLTAAQ 218
             G+ P+ D         +  N P   RKP  W   S++  DFVK+ LVK P  R TA Q
Sbjct: 219 AEGKPPYADIHPMRAIFMIPTNPPPTFRKPELW---SDNFTDFVKQCLVKSPEQRATATQ 275
Query: 219 ALSHPWVREGGDAS 232
            L HP+VR     S
Sbjct: 276 LLQHPFVRSAKGVS 289

>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate Peptide And Inhibitor Length = 342

Iteration: 1
 Score = 84.7 bits (208), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 95/187 (50%), Gaps = 26/187 (13%)
Query: 44  RLC------EGGELL-----DRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 92
           RLC       GGEL      +R+ ++  +R+     A +V  +  + +E     +V+RD+
Sbjct: 84  RLCFVMEYANGGELFFHLSRERVFSEDRARFY---GAEIVSALDYLHSE---KNVVYRDL 137
Query: 93  KPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDV 150
           K EN +     +D  +K TDFGL  + IK G   +   G+  Y+APEVL+    G   D 
Sbjct: 138 KLENLMLD---KDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDW 194
Query: 151 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDP 210
           W +GV+ Y ++CGR PF+++  + +F+ +L  +  F R   P     AK  +  LL KDP
Sbjct: 195 WGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGP----EAKSLLSGLLKKDP 250
Query: 211 RARLTAA 217
           + RL   
Sbjct: 251 KQRLGGG 257

>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor Length = 341

Iteration: 1
 Score = 84.7 bits (208), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 95/187 (50%), Gaps = 26/187 (13%)
Query: 44  RLC------EGGELL-----DRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 92
           RLC       GGEL      +R+ ++  +R+     A +V  +  + +E     +V+RD+
Sbjct: 83  RLCFVMEYANGGELFFHLSRERVFSEDRARFY---GAEIVSALDYLHSE---KNVVYRDL 136
Query: 93  KPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDV 150
           K EN +     +D  +K TDFGL  + IK G   +   G+  Y+APEVL+    G   D 
Sbjct: 137 KLENLMLD---KDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDNDYGRAVDW 193
Query: 151 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDP 210
           W +GV+ Y ++CGR PF+++  + +F+ +L  +  F R   P     AK  +  LL KDP
Sbjct: 194 WGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPRTLGP----EAKSLLSGLLKKDP 249
Query: 211 RARLTAA 217
           + RL   
Sbjct: 250 KQRLGGG 256

>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex With N-(4- (5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h- Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide Length = 446

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 96/187 (51%), Gaps = 26/187 (13%)
Query: 44  RLC------EGGELL-----DRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 92
           RLC       GGEL      +R+ ++  +R+     A +V  +  + +E     +V+RD+
Sbjct: 222 RLCFVMEYANGGELFFHLSRERVFSEDRARFY---GAEIVSALDYLHSE---KNVVYRDL 275
Query: 93  KPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDV 150
           K EN +     +D  +K TDFGL  + IK G   +   G+  Y+APEVL+    G   D 
Sbjct: 276 KLENLMLD---KDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDW 332
Query: 151 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDP 210
           W +GV+ Y ++CGR PF+++  + +F+ +L  +  F R    ++   AK  +  LL KDP
Sbjct: 333 WGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSLLSGLLKKDP 388
Query: 211 RARLTAA 217
           + RL   
Sbjct: 389 KQRLGGG 395

>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric Inhibitor Length = 446

Iteration: 1
 Score = 84.7 bits (208), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/187 (31%), Positives = 96/187 (51%), Gaps = 26/187 (13%)
Query: 44  RLC------EGGELL-----DRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDM 92
           RLC       GGEL      +R+ ++  +R+     A +V  +  + +E     +V+RD+
Sbjct: 225 RLCFVMEYANGGELFFHLSRERVFSEDRARFY---GAEIVSALDYLHSE---KNVVYRDL 278
Query: 93  KPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDV 150
           K EN +     +D  +K TDFGL  + IK G   +   G+  Y+APEVL+    G   D 
Sbjct: 279 KLENLMLD---KDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDW 335
Query: 151 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDP 210
           W +GV+ Y ++CGR PF+++  + +F+ +L  +  F R    ++   AK  +  LL KDP
Sbjct: 336 WGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSLLSGLLKKDP 391
Query: 211 RARLTAA 217
           + RL   
Sbjct: 392 KQRLGGG 398

>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And Nck-Interacting Kinase With Wee1chk1 Inhibitor Length = 326

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 14/204 (6%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +  C  G + D I   K +   E+  A + R++LR  +  H H ++HRD+K +N L    
Sbjct: 106 MEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLL--- 162
Query: 103 KEDSSLKATDFGLSDFI-KPGKKFQDIVGSAYYVAPEVLKRKSGPE------SDVWSIGV 155
            E++ +K  DFG+S  + +   +    +G+ Y++APEV+     P+      SD+WS+G+
Sbjct: 163 TENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGI 222
Query: 156 ITYILLCGRRPFWDKTEDGIFKEVLRN-KPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 214
               +  G  P  D         + RN  P  + K W   S   + F++  LVK+   R 
Sbjct: 223 TAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKW---SKKFQSFIESCLVKNHSQRP 279
Query: 215 TAAQALSHPWVREGGDASEIPIDI 238
              Q + HP++R+  +  ++ I +
Sbjct: 280 ATEQLMKHPFIRDQPNERQVRIQL 303

>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin Length = 305

Iteration: 1
 Score = 84.3 bits (207), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/178 (32%), Positives = 88/178 (49%), Gaps = 17/178 (9%)
Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
              GG+L  R+   K+  +TE+D    + ++       H  G+++RD+KPEN L     E
Sbjct: 108 FLRGGDLFTRL--SKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DE 162
Query: 105 DSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLC 162
           +  +K TDFGLS + I   KK     G+  Y+APEV+ R+   +S D WS GV+ + +L 
Sbjct: 163 EGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT 222
Query: 163 GRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
           G  PF  K        +L+ K   P F       +S  A+  ++ L  ++P  RL A 
Sbjct: 223 GTLPFQGKDRKETMTMILKAKLGMPQF-------LSPEAQSLLRMLFKRNPANRLGAG 273

>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex With Flavonoid Glycoside Sl0101 Length = 304

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/178 (32%), Positives = 88/178 (49%), Gaps = 17/178 (9%)
Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
              GG+L  R+   K+  +TE+D    + ++       H  G+++RD+KPEN L     E
Sbjct: 107 FLRGGDLFTRL--SKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DE 161
Query: 105 DSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLC 162
           +  +K TDFGLS + I   KK     G+  Y+APEV+ R+   +S D WS GV+ + +L 
Sbjct: 162 EGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT 221
Query: 163 GRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
           G  PF  K        +L+ K   P F       +S  A+  ++ L  ++P  RL A 
Sbjct: 222 GTLPFQGKDRKETMTMILKAKLGMPQF-------LSPEAQSLLRMLFKRNPANRLGAG 272

>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N- Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2 Length = 325

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/178 (32%), Positives = 88/178 (49%), Gaps = 17/178 (9%)
Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
              GG+L  R+   K+  +TE+D    + ++       H  G+++RD+KPEN L     E
Sbjct: 107 FLRGGDLFTRL--SKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILL---DE 161
Query: 105 DSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLC 162
           +  +K TDFGLS + I   KK     G+  Y+APEV+ R+   +S D WS GV+ + +L 
Sbjct: 162 EGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLT 221
Query: 163 GRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
           G  PF  K        +L+ K   P F       +S  A+  ++ L  ++P  RL A 
Sbjct: 222 GTLPFQGKDRKETMTMILKAKLGMPQF-------LSPEAQSLLRMLFKRNPANRLGAG 272

>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In Complex With Sto-609 Length = 298

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 49/167 (29%), Positives = 82/167 (49%), Gaps = 10/167 (5%)
Query: 64  TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 123
           +E  A    + +++     H   ++HRD+KP N L     ED  +K  DFG+S+  K   
Sbjct: 135 SEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLL---VGEDGHIKIADFGVSNEFKGSD 191
Query: 124 KF-QDIVGSAYYVAPEVLKRK----SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 178
               + VG+  ++APE L       SG   DVW++GV  Y  + G+ PF D+    +  +
Sbjct: 192 ALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSK 251
Query: 179 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           +     +F  +P   I+   KD + ++L K+P +R+   +   HPWV
Sbjct: 252 IKSQALEFPDQP--DIAEDLKDLITRMLDKNPESRIVVPEIKLHPWV 296

>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point Mutations (K299r, T423e) Length = 297

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 94/181 (51%), Gaps = 9/181 (4%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG L D +    ++   E   A V R+ L+     H + ++HRD+K +N L      D S
Sbjct: 101 GGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM---DGS 154
Query: 108 LKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRR 165
           +K TDFG    I P + K  ++VG+ Y++APEV+ RK+ GP+ D+WS+G++   ++ G  
Sbjct: 155 VKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 214
Query: 166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           P+ ++        +  N     + P   +S   +DF+ + L  D   R +A + L H ++
Sbjct: 215 PYLNENPLRALYLIATNGTPELQNP-EKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFL 273
Query: 226 R 226
           +
Sbjct: 274 K 274

>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium Complex Lambda-Fl172 Length = 297

Iteration: 1
 Score = 82.8 bits (203), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 93/181 (51%), Gaps = 9/181 (4%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG L D +    ++   E   A V R+ L+     H + ++HRD+K +N L      D S
Sbjct: 101 GGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM---DGS 154
Query: 108 LKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRR 165
           +K TDFG    I P + K   +VG+ Y++APEV+ RK+ GP+ D+WS+G++   ++ G  
Sbjct: 155 VKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 214
Query: 166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           P+ ++        +  N     + P   +S   +DF+ + L  D   R +A + L H ++
Sbjct: 215 PYLNENPLRALYLIATNGTPELQNP-EKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFL 273
Query: 226 R 226
           +
Sbjct: 274 K 274

>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine Length = 353

Iteration: 1
 Score = 82.8 bits (203), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 94/200 (47%), Gaps = 17/200 (8%)
Query: 36  PLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPE 95
           P R    +    GG+L+  I  +K  R+ E  A     +++      H  G+++RD+K +
Sbjct: 96  PDRLFFVMEFVNGGDLMFHI--QKSRRFDEARARFYAAEIISALMFLHDKGIIYRDLKLD 153
Query: 96  NFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSI 153
           N L      +   K  DFG+  + I  G       G+  Y+APE+L+    GP  D W++
Sbjct: 154 NVLLD---HEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAM 210
Query: 154 GVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRAR 213
           GV+ Y +LCG  PF  + ED +F+ +L ++  +    W  +   A   +K  + K+P  R
Sbjct: 211 GVLLYEMLCGHAPFEAENEDDLFEAILNDEVVY--PTW--LHEDATGILKSFMTKNPTMR 266
Query: 214 LTAAQA------LSHPWVRE 227
           L +         L HP+ +E
Sbjct: 267 LGSLTQGGEHAILRHPFFKE 286

>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Compound 902 Length = 301

Iteration: 1
 Score = 82.8 bits (203), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 11/195 (5%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + +C    LL+  L K+    TE +A   +RQ ++     H + ++HRD+K  N      
Sbjct: 105 LEICRRRSLLE--LHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN-- 160
Query: 103 KEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITYIL 160
            +D  +K  DFGL+  I+  G++ +D+ G+  Y+APEVL +K    E D+WS+G I Y L
Sbjct: 161 -DDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTL 219
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           L G+ PF        +  + +N+    R     I+  A   ++++L  DP  R + A+ L
Sbjct: 220 LVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASALIRRMLHADPTLRPSVAELL 275
Query: 221 SHPWVREGGDASEIP 235
           +  +   G     +P
Sbjct: 276 TDEFFTSGYAPMRLP 290

>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like Kinase 1 (Plk1) Catalytic Domain. Length = 317

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 97/195 (49%), Gaps = 11/195 (5%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + +C    LL+  L K+    TE +A   +RQ ++     H + ++HRD+K  N      
Sbjct: 121 LEICRRRSLLE--LHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN-- 176
Query: 103 KEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITYIL 160
            +D  +K  DFGL+  I+  G++ +D+ G+  Y+APEVL +K    E D+WS+G I Y L
Sbjct: 177 -DDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTL 235
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           L G+ PF        +  + +N+    R     I+  A   ++++L  DP  R + A+ L
Sbjct: 236 LVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASALIRRMLHADPTLRPSVAELL 291
Query: 221 SHPWVREGGDASEIP 235
           +  +   G     +P
Sbjct: 292 TDEFFTSGYAPMRLP 306

>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1 Length = 297

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 93/181 (51%), Gaps = 9/181 (4%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG L D +    ++   E   A V R+ L+     H + ++HRD+K +N L      D S
Sbjct: 101 GGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM---DGS 154
Query: 108 LKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRR 165
           +K TDFG    I P + K   +VG+ Y++APEV+ RK+ GP+ D+WS+G++   ++ G  
Sbjct: 155 VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 214
Query: 166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           P+ ++        +  N     + P   +S   +DF+ + L  D   R +A + L H ++
Sbjct: 215 PYLNENPLRALYLIATNGTPELQNP-EKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFL 273
Query: 226 R 226
           +
Sbjct: 274 K 274

>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I) Length = 327

Iteration: 1
 Score = 82.4 bits (202), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 91/187 (48%), Gaps = 16/187 (8%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGEL  ++  +++  + E  A   + ++       H  G+++RD+KPEN +         
Sbjct: 105 GGELFMQL--EREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIML---NHQGH 159
Query: 108 LKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRR 165
           +K TDFGL  + I  G       G+  Y+APE+L R     + D WS+G + Y +L G  
Sbjct: 160 VKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAP 219
Query: 166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT-----AAQAL 220
           PF  +       ++L+ K +      P ++  A+D +KKLL ++  +RL      A +  
Sbjct: 220 PFTGENRKKTIDKILKCKLNLP----PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQ 275
Query: 221 SHPWVRE 227
           +HP+ R 
Sbjct: 276 AHPFFRH 282

>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1 Length = 327

Iteration: 1
 Score = 82.4 bits (202), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 91/187 (48%), Gaps = 16/187 (8%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGEL  ++  +++  + E  A   + ++       H  G+++RD+KPEN +         
Sbjct: 105 GGELFMQL--EREGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIML---NHQGH 159
Query: 108 LKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRR 165
           +K TDFGL  + I  G       G+  Y+APE+L R     + D WS+G + Y +L G  
Sbjct: 160 VKLTDFGLCKESIHDGTVTHXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAP 219
Query: 166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT-----AAQAL 220
           PF  +       ++L+ K +      P ++  A+D +KKLL ++  +RL      A +  
Sbjct: 220 PFTGENRKKTIDKILKCKLNLP----PYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQ 275
Query: 221 SHPWVRE 227
           +HP+ R 
Sbjct: 276 AHPFFRH 282

>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332

Iteration: 1
 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 38/200 (19%)
Query: 64  TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 123
           T+ D    + ++L+    CH  G++HRD+KP N +     E   L+  D+GL++F  PGK
Sbjct: 124 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGK 181
Query: 124 KFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK-- 177
           ++   V S Y+  PE+L   +      D+WS+G +   ++  + PF+      D + K  
Sbjct: 182 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 241
Query: 178 --------EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKKLLV 207
                    V  NK      P          RKPW    N+         A DF+ KLL 
Sbjct: 242 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLR 301
Query: 208 KDPRARLTAAQALSHPWVRE 227
            D + RLTA +A++HP+ ++
Sbjct: 302 YDHQERLTALEAMTHPYFQQ 321

>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 53/181 (29%), Positives = 93/181 (51%), Gaps = 9/181 (4%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG L D +    ++   E   A V R+ L+     H + ++HRD+K +N L      D S
Sbjct: 102 GGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM---DGS 155
Query: 108 LKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRR 165
           +K TDFG    I P + K   +VG+ Y++APEV+ RK+ GP+ D+WS+G++   ++ G  
Sbjct: 156 VKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 215
Query: 166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           P+ ++        +  N     + P   +S   +DF+ + L  D   R +A + + H ++
Sbjct: 216 PYLNENPLRALYLIATNGTPELQNP-EKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFL 274
Query: 226 R 226
           +
Sbjct: 275 K 275

>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327

Iteration: 1
 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 38/200 (19%)
Query: 64  TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 123
           T+ D    + ++L+    CH  G++HRD+KP N +     E   L+  D+GL++F  PGK
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGK 180
Query: 124 KFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK-- 177
           ++   V S Y+  PE+L   +      D+WS+G +   ++  + PF+      D + K  
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
Query: 178 --------EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKKLLV 207
                    V  NK      P          RKPW    N+         A DF+ KLL 
Sbjct: 241 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLR 300
Query: 208 KDPRARLTAAQALSHPWVRE 227
            D + RLTA +A++HP+ ++
Sbjct: 301 YDHQERLTALEAMTHPYFQQ 320

>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331

Iteration: 1
 Score = 82.0 bits (201), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 38/200 (19%)
Query: 64  TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 123
           T+ D    + ++L+    CH  G++HRD+KP N +     E   L+  D+GL++F  PGK
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGK 180
Query: 124 KFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK-- 177
           ++   V S Y+  PE+L   +      D+WS+G +   ++  + PF+      D + K  
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
Query: 178 --------EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKKLLV 207
                    V  NK      P          RKPW    N+         A DF+ KLL 
Sbjct: 241 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLR 300
Query: 208 KDPRARLTAAQALSHPWVRE 227
            D + RLTA +A++HP+ ++
Sbjct: 301 YDHQERLTALEAMTHPYFQQ 320

>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326

Iteration: 1
 Score = 82.0 bits (201), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 38/200 (19%)
Query: 64  TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 123
           T+ D    + ++L+    CH  G++HRD+KP N +     E   L+  D+GL++F  PGK
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGK 180
Query: 124 KFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK-- 177
           ++   V S Y+  PE+L   +      D+WS+G +   ++  + PF+      D + K  
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
Query: 178 --------EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKKLLV 207
                    V  NK      P          RKPW    N+         A DF+ KLL 
Sbjct: 241 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLR 300
Query: 208 KDPRARLTAAQALSHPWVRE 227
            D + RLTA +A++HP+ ++
Sbjct: 301 YDHQERLTALEAMTHPYFQQ 320

>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332

Iteration: 1
 Score = 82.0 bits (201), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 38/200 (19%)
Query: 64  TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 123
           T+ D    + ++L+    CH  G++HRD+KP N +     E   L+  D+GL++F  PGK
Sbjct: 124 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGK 181
Query: 124 KFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK-- 177
           ++   V S Y+  PE+L   +      D+WS+G +   ++  + PF+      D + K  
Sbjct: 182 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 241
Query: 178 --------EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKKLLV 207
                    V  NK      P          RKPW    N+         A DF+ KLL 
Sbjct: 242 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLR 301
Query: 208 KDPRARLTAAQALSHPWVRE 227
            D + RLTA +A++HP+ ++
Sbjct: 302 YDHQERLTALEAMTHPYFQQ 321

>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326

Iteration: 1
 Score = 82.0 bits (201), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 38/200 (19%)
Query: 64  TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 123
           T+ D    + ++L+    CH  G++HRD+KP N +     E   L+  D+GL++F  PGK
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGK 180
Query: 124 KFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK-- 177
           ++   V S Y+  PE+L   +      D+WS+G +   ++  + PF+      D + K  
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
Query: 178 --------EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKKLLV 207
                    V  NK      P          RKPW    N+         A DF+ KLL 
Sbjct: 241 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLR 300
Query: 208 KDPRARLTAAQALSHPWVRE 227
            D + RLTA +A++HP+ ++
Sbjct: 301 YDHQERLTALEAMTHPYFQQ 320

>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327

Iteration: 1
 Score = 82.0 bits (201), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 38/200 (19%)
Query: 64  TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 123
           T+ D    + ++L+    CH  G++HRD+KP N +     E   L+  D+GL++F  PGK
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGK 180
Query: 124 KFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK-- 177
           ++   V S Y+  PE+L   +      D+WS+G +   ++  + PF+      D + K  
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
Query: 178 --------EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKKLLV 207
                    V  NK      P          RKPW    N+         A DF+ KLL 
Sbjct: 241 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLR 300
Query: 208 KDPRARLTAAQALSHPWVRE 227
            D + RLTA +A++HP+ ++
Sbjct: 301 YDHQERLTALEAMTHPYFQQ 320

>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325

Iteration: 1
 Score = 82.0 bits (201), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 38/200 (19%)
Query: 64  TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 123
           T+ D    + ++L+    CH  G++HRD+KP N +     E   L+  D+GL++F  PGK
Sbjct: 123 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGK 180
Query: 124 KFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK-- 177
           ++   V S Y+  PE+L   +      D+WS+G +   ++  + PF+      D + K  
Sbjct: 181 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 240
Query: 178 --------EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKKLLV 207
                    V  NK      P          RKPW    N+         A DF+ KLL 
Sbjct: 241 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLR 300
Query: 208 KDPRARLTAAQALSHPWVRE 227
            D + RLTA +A++HP+ ++
Sbjct: 301 YDHQERLTALEAMTHPYFQQ 320

>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335

Iteration: 1
 Score = 82.0 bits (201), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 93/200 (46%), Gaps = 38/200 (19%)
Query: 64  TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 123
           T+ D    + ++L+    CH  G++HRD+KP N +     E   L+  D+GL++F  PGK
Sbjct: 125 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGK 182
Query: 124 KFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK-- 177
           ++   V S Y+  PE+L   +      D+WS+G +   ++  + PF+      D + K  
Sbjct: 183 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 242
Query: 178 --------EVLRNK------PDFR-------RKPWPSISNS---------AKDFVKKLLV 207
                    V  NK      P          RKPW    N+         A DF+ KLL 
Sbjct: 243 KVLGTDGLNVYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLR 302
Query: 208 KDPRARLTAAQALSHPWVRE 227
            D + RLTA +A++HP+ ++
Sbjct: 303 YDHQERLTALEAMTHPYFQQ 322

>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human Rsk-1 Bound To Amp-Pcp Length = 321

Iteration: 1
 Score = 81.6 bits (200), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 87/178 (48%), Gaps = 17/178 (9%)
Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
              GG+L  R+   K+  +TE+D    + ++       H  G+++RD+KPEN L     E
Sbjct: 111 FLRGGDLFTRL--SKEVMFTEEDVKFYLAELALGLDHLHSLGIIYRDLKPENILL---DE 165
Query: 105 DSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLC 162
           +  +K TDFGLS + I   KK     G+  Y+APEV+ R+    S D WS GV+ + +L 
Sbjct: 166 EGHIKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLT 225
Query: 163 GRRPFWDKTEDGIFKEVLRNK---PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
           G  PF  K        +L+ K   P F       +S  A+  ++ L  ++P  RL + 
Sbjct: 226 GSLPFQGKDRKETMTLILKAKLGMPQF-------LSTEAQSLLRALFKRNPANRLGSG 276

>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 38/200 (19%)
Query: 64  TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 123
           T+ D    + ++L+    CH  G++HRD+KP N +     E   L+  D+GL++F  PGK
Sbjct: 144 TDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDH--ELRKLRLIDWGLAEFYHPGK 201
Query: 124 KFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE--------- 172
           ++   V S Y+  PE+L   +      D+WS+G +   ++  + PF+   +         
Sbjct: 202 EYNVRVASRYFKGPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIA 261
Query: 173 -----DGIFKEVLRNKPDF-----------RRKPWPSISNS---------AKDFVKKLLV 207
                DG+   + + + +             RKPW    N+         A DF+ KLL 
Sbjct: 262 KVLGTDGLNAYLNKYRIELDPQLEALVGRHSRKPWLKFMNADNQHLVSPEAIDFLDKLLR 321
Query: 208 KDPRARLTAAQALSHPWVRE 227
            D + RLTA +A++HP+ ++
Sbjct: 322 YDHQERLTALEAMTHPYFQQ 341

>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain Length = 306

Iteration: 1
 Score = 80.9 bits (198), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 93/181 (51%), Gaps = 9/181 (4%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG L D +    ++   E   A V R+ L+     H + ++HR++K +N L      D S
Sbjct: 102 GGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSNQVIHRNIKSDNILLGM---DGS 155
Query: 108 LKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRR 165
           +K TDFG    I P + K   +VG+ Y++APEV+ RK+ GP+ D+WS+G++   ++ G  
Sbjct: 156 VKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEP 215
Query: 166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           P+ ++        +  N     + P   +S   +DF+ + L  D   R +A + + H ++
Sbjct: 216 PYLNENPLRALYLIATNGTPELQNP-EKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFL 274
Query: 226 R 226
           +
Sbjct: 275 K 275

>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1) Catalytic Domain Length = 317

Iteration: 1
 Score = 80.1 bits (196), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 96/195 (49%), Gaps = 11/195 (5%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + +C    LL+  L K+    TE +A   +RQ ++     H + ++HRD+K  N      
Sbjct: 121 LEICRRRSLLE--LHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN-- 176
Query: 103 KEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITYIL 160
            +D  +K  DFGL+  I+  G++ + + G+  Y+APEVL +K    E D+WS+G I Y L
Sbjct: 177 -DDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTL 235
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           L G+ PF        +  + +N+    R     I+  A   ++++L  DP  R + A+ L
Sbjct: 236 LVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASALIRRMLHADPTLRPSVAELL 291
Query: 221 SHPWVREGGDASEIP 235
           +  +   G     +P
Sbjct: 292 TDEFFTSGYAPMRLP 306

>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1 (Plk1) Catalytic Domain In Complex With Adp Length = 317

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 96/195 (49%), Gaps = 11/195 (5%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + +C    LL+  L K+    TE +A   +RQ ++     H + ++HRD+K  N      
Sbjct: 121 LEICRRRSLLE--LHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLN-- 176
Query: 103 KEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITYIL 160
            +D  +K  DFGL+  I+  G++ + + G+  Y+APEVL +K    E D+WS+G I Y L
Sbjct: 177 -DDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTL 235
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           L G+ PF        +  + +N+    R     I+  A   ++++L  DP  R + A+ L
Sbjct: 236 LVGKPPFETSCLKETYIRIKKNEYSVPR----HINPVASALIRRMLHADPTLRPSVAELL 291
Query: 221 SHPWVREGGDASEIP 235
           +  +   G     +P
Sbjct: 292 TDEFFTSGYAPMRLP 306

>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded Form) Length = 325

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 97/194 (50%), Gaps = 20/194 (10%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           I  C GG + D ++ + +   TE    VV +Q L      H + ++HRD+K  N LF   
Sbjct: 113 IEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTL- 170
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQ---DIVGSAYYVAPEVLKRKSGPE------SDVWSI 153
             D  +K  DFG+S   K  +  Q     +G+ Y++APEV+  ++  +      +DVWS+
Sbjct: 171 --DGDIKLADFGVS--AKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSL 226
Query: 154 GVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP--WPSISNSAKDFVKKLLVKDPR 211
           G+    +     P  +     +  ++ +++P    +P  W   S++ KDF+KK L K+  
Sbjct: 227 GITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---SSNFKDFLKKCLEKNVD 283
Query: 212 ARLTAAQALSHPWV 225
           AR T +Q L HP+V
Sbjct: 284 ARWTTSQLLQHPFV 297

>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5- Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 79.7 bits (195), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 97/194 (50%), Gaps = 20/194 (10%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           I  C GG + D ++ + +   TE    VV +Q L      H + ++HRD+K  N LF   
Sbjct: 113 IEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTL- 170
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQ---DIVGSAYYVAPEVLKRKSGPE------SDVWSI 153
             D  +K  DFG+S   K  +  Q     +G+ Y++APEV+  ++  +      +DVWS+
Sbjct: 171 --DGDIKLADFGVS--AKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSL 226
Query: 154 GVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP--WPSISNSAKDFVKKLLVKDPR 211
           G+    +     P  +     +  ++ +++P    +P  W   S++ KDF+KK L K+  
Sbjct: 227 GITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---SSNFKDFLKKCLEKNVD 283
Query: 212 ARLTAAQALSHPWV 225
           AR T +Q L HP+V
Sbjct: 284 ARWTTSQLLQHPFV 297

>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp Length = 335

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 77/168 (45%), Gaps = 15/168 (8%)
Query: 62  RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 121
           R  E  A+ + RQ++       L  ++HRD+K EN +     ED ++K  DFG + +++ 
Sbjct: 126 RLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIA---EDFTIKLIDFGSAAYLER 182
Query: 122 GKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV 179
           GK F    G+  Y APEVL      GPE ++WS+GV  Y L+    PF +          
Sbjct: 183 GKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCE---------- 232
Query: 180 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
           L    +    P   +S      V  LL   P  R T  + ++ PWV +
Sbjct: 233 LEETVEAAIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQ 280

>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase ( Diphosphorylated Form) Bound To 5- Amino-3-((4-( Aminosulfonyl)phenyl)amino)-N-(2,6- Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide Length = 325

Iteration: 1
 Score = 79.3 bits (194), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/194 (30%), Positives = 96/194 (49%), Gaps = 20/194 (10%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           I  C GG + D ++ + +   TE    VV +Q L      H + ++HRD+K  N LF   
Sbjct: 113 IEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFTL- 170
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQ---DIVGSAYYVAPEVL------KRKSGPESDVWSI 153
             D  +K  DFG+S   K  +  Q     +G+ Y++APEV+       R    ++DVWS+
Sbjct: 171 --DGDIKLADFGVS--AKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRPYDYKADVWSL 226
Query: 154 GVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP--WPSISNSAKDFVKKLLVKDPR 211
           G+    +     P  +     +  ++ +++P    +P  W   S++ KDF+KK L K+  
Sbjct: 227 GITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRW---SSNFKDFLKKCLEKNVD 283
Query: 212 ARLTAAQALSHPWV 225
           AR T +Q L HP+V
Sbjct: 284 ARWTTSQLLQHPFV 297

>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335

Iteration: 1
 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 64  TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 123
           T+ D    + ++L+    CH  G++HRD+KP N L     E   L+  D+GL++F  PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVLID--HEHRKLRLIDWGLAEFYHPGQ 186
Query: 124 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE--------- 172
           ++   V S Y+  PE+L   +      D+WS+G +   ++  + PF+   +         
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 173 ---------DGIFKEVLRNKPDFR-------RKPWPSISNS---------AKDFVKKLLV 207
                    D I K  +   P F        RK W    +S         A DF+ KLL 
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 208 KDPRARLTAAQALSHPW 224
            D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 78.6 bits (192), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 97/219 (44%), Gaps = 46/219 (21%)
Query: 37  LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 96
           L+KL  + +CEGG  L+ + AK             + Q+L   A CH   ++HRD+KP+N
Sbjct: 86  LKKL--LDVCEGG--LESVTAKS-----------FLLQLLNGIAYCHDRRVLHRDLKPQN 130
Query: 97  FLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSI 153
            L     E   LK  DFGL+  F  P +K+   V + +Y AP+VL   +K     D+WS+
Sbjct: 131 LLINREGE---LKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSV 187
Query: 154 GVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN----------------- 196
           G I   ++ G   F   +E      + R       K WP+++                  
Sbjct: 188 GCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWE 247
Query: 197 --------SAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
                   S  D + K+L  DP  R+TA QAL H + +E
Sbjct: 248 SFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286

>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662 Length = 279

Iteration: 1
 Score = 78.6 bits (192), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 101/194 (52%), Gaps = 15/194 (7%)
Query: 43  IRLCEGGELLDRIL-AKKDSRYTEKDAAVVVRQMLRVA-AECHL-----HGLVHRDMKPE 95
           +  CEGG+L   I    K+ +Y +++  + V   L +A  ECH      H ++HRD+KP 
Sbjct: 86  MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPA 145
Query: 96  NFLFKSAKEDSSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEVLKRKSGPE-SDVWSI 153
           N +F   K++  +K  DFGL+  +   + F ++ VG+ YY++PE + R S  E SD+WS+
Sbjct: 146 N-VFLDGKQN--VKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSL 202
Query: 154 GVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRAR 213
           G + Y L     PF   ++  +  ++   K  FRR P+   S+   + + ++L      R
Sbjct: 203 GCLLYELCALMPPFTAFSQKELAGKIREGK--FRRIPY-RYSDELNEIITRMLNLKDYHR 259
Query: 214 LTAAQALSHPWVRE 227
            +  + L +P + E
Sbjct: 260 PSVEEILENPLILE 273

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 78.6 bits (192), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 65/219 (29%), Positives = 97/219 (44%), Gaps = 46/219 (21%)
Query: 37  LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 96
           L+KL  + +CEGG  L+ + AK             + Q+L   A CH   ++HRD+KP+N
Sbjct: 86  LKKL--LDVCEGG--LESVTAKS-----------FLLQLLNGIAYCHDRRVLHRDLKPQN 130
Query: 97  FLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSI 153
            L     E   LK  DFGL+  F  P +K+   V + +Y AP+VL   +K     D+WS+
Sbjct: 131 LLINREGE---LKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSV 187
Query: 154 GVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN----------------- 196
           G I   ++ G   F   +E      + R       K WP+++                  
Sbjct: 188 GCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWE 247
Query: 197 --------SAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
                   S  D + K+L  DP  R+TA QAL H + +E
Sbjct: 248 SFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286

>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334

Iteration: 1
 Score = 78.2 bits (191), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 64  TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 123
           T+ D    + ++L+    CH  G++HRD+KP N +     E   L+  D+GL++F  PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 186
Query: 124 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE--------- 172
           ++   V S Y+  PE+L   +      D+WS+G +   ++  + PF+   +         
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 173 ---------DGIFKEVLRNKPDFR-------RKPWPSISNS---------AKDFVKKLLV 207
                    D I K  +   P F        RK W    +S         A DF+ KLL 
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 208 KDPRARLTAAQALSHPW 224
            D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 78.2 bits (191), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 64/219 (29%), Positives = 97/219 (44%), Gaps = 46/219 (21%)
Query: 37  LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 96
           L+KL  + +CEGG  L+ + AK             + Q+L   A CH   ++HRD+KP+N
Sbjct: 86  LKKL--LDVCEGG--LESVTAKS-----------FLLQLLNGIAYCHDRRVLHRDLKPQN 130
Query: 97  FLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSI 153
            L     E   LK  DFGL+  F  P +K+   + + +Y AP+VL   +K     D+WS+
Sbjct: 131 LLINREGE---LKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSV 187
Query: 154 GVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN----------------- 196
           G I   ++ G   F   +E      + R       K WP+++                  
Sbjct: 188 GCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWE 247
Query: 197 --------SAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
                   S  D + K+L  DP  R+TA QAL H + +E
Sbjct: 248 SFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE 286

>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333

Iteration: 1
 Score = 78.2 bits (191), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 64  TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 123
           T+ D    + ++L+    CH  G++HRD+KP N +     E   L+  D+GL++F  PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 186
Query: 124 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE--------- 172
           ++   V S Y+  PE+L   +      D+WS+G +   ++  + PF+   +         
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 173 ---------DGIFKEVLRNKPDFR-------RKPWPSISNS---------AKDFVKKLLV 207
                    D I K  +   P F        RK W    +S         A DF+ KLL 
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 208 KDPRARLTAAQALSHPW 224
            D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323

>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334

Iteration: 1
 Score = 78.2 bits (191), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 64  TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 123
           T+ D    + ++L+    CH  G++HRD+KP N +     E   L+  D+GL++F  PG+
Sbjct: 128 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 185
Query: 124 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE--------- 172
           ++   V S Y+  PE+L   +      D+WS+G +   ++  + PF+   +         
Sbjct: 186 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 245
Query: 173 ---------DGIFKEVLRNKPDFR-------RKPWPSISNS---------AKDFVKKLLV 207
                    D I K  +   P F        RK W    +S         A DF+ KLL 
Sbjct: 246 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 305
Query: 208 KDPRARLTAAQALSHPW 224
            D ++RLTA +A+ HP+
Sbjct: 306 YDHQSRLTAREAMEHPY 322

>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331

Iteration: 1
 Score = 78.2 bits (191), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 64  TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 123
           T+ D    + ++L+    CH  G++HRD+KP N +     E   L+  D+GL++F  PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 186
Query: 124 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE--------- 172
           ++   V S Y+  PE+L   +      D+WS+G +   ++  + PF+   +         
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 173 ---------DGIFKEVLRNKPDFR-------RKPWPSISNS---------AKDFVKKLLV 207
                    D I K  +   P F        RK W    +S         A DF+ KLL 
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 208 KDPRARLTAAQALSHPW 224
            D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323

>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 78.2 bits (191), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 64  TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 123
           T+ D    + ++L+    CH  G++HRD+KP N +     E   L+  D+GL++F  PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 186
Query: 124 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE--------- 172
           ++   V S Y+  PE+L   +      D+WS+G +   ++  + PF+   +         
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 173 ---------DGIFKEVLRNKPDFR-------RKPWPSISNS---------AKDFVKKLLV 207
                    D I K  +   P F        RK W    +S         A DF+ KLL 
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 208 KDPRARLTAAQALSHPW 224
            D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323

>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335

Iteration: 1
 Score = 78.2 bits (191), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 64  TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 123
           T+ D    + ++L+    CH  G++HRD+KP N +     E   L+  D+GL++F  PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 186
Query: 124 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE--------- 172
           ++   V S Y+  PE+L   +      D+WS+G +   ++  + PF+   +         
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 173 ---------DGIFKEVLRNKPDFR-------RKPWPSISNS---------AKDFVKKLLV 207
                    D I K  +   P F        RK W    +S         A DF+ KLL 
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 208 KDPRARLTAAQALSHPW 224
            D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323

>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 78.2 bits (191), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 64  TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 123
           T+ D    + ++L+    CH  G++HRD+KP N +     E   L+  D+GL++F  PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 186
Query: 124 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE--------- 172
           ++   V S Y+  PE+L   +      D+WS+G +   ++  + PF+   +         
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 173 ---------DGIFKEVLRNKPDFR-------RKPWPSISNS---------AKDFVKKLLV 207
                    D I K  +   P F        RK W    +S         A DF+ KLL 
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 208 KDPRARLTAAQALSHPW 224
            D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323

>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target Length = 303

Iteration: 1
 Score = 78.2 bits (191), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 43  IRLCEGGELLD---RILAK---KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 96
           ++L  GG +LD    I+AK   K     E   A ++R++L      H +G +HRD+K  N
Sbjct: 92  MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGN 151
Query: 97  FLFKSAKEDSSLKATDFGLSDFIKPG------KKFQDIVGSAYYVAPEVLKRKSGPE--S 148
            L     ED S++  DFG+S F+  G      K  +  VG+  ++APEV+++  G +  +
Sbjct: 152 ILL---GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKA 208
Query: 149 DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD-------- 200
           D+WS G+    L  G  P+       +    L+N P       PS+    +D        
Sbjct: 209 DIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP-------PSLETGVQDKEMLKKYG 261
Query: 201 -----FVKKLLVKDPRARLTAAQALSHPWVREG 228
                 +   L KDP  R TAA+ L H + ++ 
Sbjct: 262 KSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA 294

>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328

Iteration: 1
 Score = 78.2 bits (191), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 64  TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 123
           T+ D    + ++L+    CH  G++HRD+KP N +     E   L+  D+GL++F  PG+
Sbjct: 127 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 184
Query: 124 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE--------- 172
           ++   V S Y+  PE+L   +      D+WS+G +   ++  + PF+   +         
Sbjct: 185 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 244
Query: 173 ---------DGIFKEVLRNKPDFR-------RKPWPSISNS---------AKDFVKKLLV 207
                    D I K  +   P F        RK W    +S         A DF+ KLL 
Sbjct: 245 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 304
Query: 208 KDPRARLTAAQALSHPW 224
            D ++RLTA +A+ HP+
Sbjct: 305 YDHQSRLTAREAMEHPY 321

>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 64  TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 123
           T+ D    + ++L+    CH  G++HRD+KP N +     E   L+  D+GL++F  PG+
Sbjct: 128 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 185
Query: 124 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE--------- 172
           ++   V S Y+  PE+L   +      D+WS+G +   ++  + PF+   +         
Sbjct: 186 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 245
Query: 173 ---------DGIFKEVLRNKPDFR-------RKPWPSISNS---------AKDFVKKLLV 207
                    D I K  +   P F        RK W    +S         A DF+ KLL 
Sbjct: 246 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 305
Query: 208 KDPRARLTAAQALSHPW 224
            D ++RLTA +A+ HP+
Sbjct: 306 YDHQSRLTAREAMEHPY 322

>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 64  TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 123
           T+ D    + ++L+    CH  G++HRD+KP N +     E   L+  D+GL++F  PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 186
Query: 124 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE--------- 172
           ++   V S Y+  PE+L   +      D+WS+G +   ++  + PF+   +         
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 173 ---------DGIFKEVLRNKPDFR-------RKPWPSISNS---------AKDFVKKLLV 207
                    D I K  +   P F        RK W    +S         A DF+ KLL 
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 208 KDPRARLTAAQALSHPW 224
            D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323

>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 64  TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 123
           T+ D    + ++L+    CH  G++HRD+KP N +     E   L+  D+GL++F  PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 186
Query: 124 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE--------- 172
           ++   V S Y+  PE+L   +      D+WS+G +   ++  + PF+   +         
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 173 ---------DGIFKEVLRNKPDFR-------RKPWPSISNS---------AKDFVKKLLV 207
                    D I K  +   P F        RK W    +S         A DF+ KLL 
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 208 KDPRARLTAAQALSHPW 224
            D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323

>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain Length = 290

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/213 (28%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 43  IRLCEGGELLD---RILAK---KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 96
           ++L  GG +LD    I+AK   K     E   A ++R++L      H +G +HRD+K  N
Sbjct: 87  MKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGN 146
Query: 97  FLFKSAKEDSSLKATDFGLSDFIKPG------KKFQDIVGSAYYVAPEVLKRKSGPE--S 148
            L     ED S++  DFG+S F+  G      K  +  VG+  ++APEV+++  G +  +
Sbjct: 147 ILL---GEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKA 203
Query: 149 DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD-------- 200
           D+WS G+    L  G  P+       +    L+N P       PS+    +D        
Sbjct: 204 DIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDP-------PSLETGVQDKEMLKKYG 256
Query: 201 -----FVKKLLVKDPRARLTAAQALSHPWVREG 228
                 +   L KDP  R TAA+ L H + ++ 
Sbjct: 257 KSFRKMISLCLQKDPEKRPTAAELLRHKFFQKA 289

>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 64  TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 123
           T+ D    + ++L+    CH  G++HRD+KP N +     E   L+  D+GL++F  PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 186
Query: 124 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE--------- 172
           ++   V S Y+  PE+L   +      D+WS+G +   ++  + PF+   +         
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 173 ---------DGIFKEVLRNKPDFR-------RKPWPSISNS---------AKDFVKKLLV 207
                    D I K  +   P F        RK W    +S         A DF+ KLL 
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 208 KDPRARLTAAQALSHPW 224
            D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323

>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 64  TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 123
           T+ D    + ++L+    CH  G++HRD+KP N +     E   L+  D+GL++F  PG+
Sbjct: 134 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMID--HEHRKLRLIDWGLAEFYHPGQ 191
Query: 124 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE--------- 172
           ++   V S Y+  PE+L   +      D+WS+G +   ++  + PF+   +         
Sbjct: 192 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 251
Query: 173 ---------DGIFKEVLRNKPDFR-------RKPWPSISNS---------AKDFVKKLLV 207
                    D I K  +   P F        RK W    +S         A DF+ KLL 
Sbjct: 252 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 311
Query: 208 KDPRARLTAAQALSHPW 224
            D ++RLTA +A+ HP+
Sbjct: 312 YDHQSRLTAREAMEHPY 328

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/197 (27%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 64  TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 123
           T+ D    + ++L+    CH  G++HRD+KP N +     E   L+  D+GL++F  PG+
Sbjct: 129 TDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEFYHPGQ 186
Query: 124 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE--------- 172
           ++   V S Y+  PE+L   +      D+WS+G +   ++  + PF+   +         
Sbjct: 187 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIA 246
Query: 173 ---------DGIFKEVLRNKPDFR-------RKPWPSISNS---------AKDFVKKLLV 207
                    D I K  +   P F        RK W    +S         A DF+ KLL 
Sbjct: 247 KVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR 306
Query: 208 KDPRARLTAAQALSHPW 224
            D ++RLTA +A+ HP+
Sbjct: 307 YDHQSRLTAREAMEHPY 323

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 77.8 bits (190), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/223 (29%), Positives = 94/223 (42%), Gaps = 41/223 (18%)
Query: 37  LRKLRRIRLCEGGELLDRILAKKDSRYT----EKDAAVVVRQMLRVAAECHLHGLVHRDM 92
            R+ RR+ L    E  D  +  +  RY     E     +  Q L+    CH H  +HRD+
Sbjct: 71  FRRKRRLHLV--FEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDV 128
Query: 93  KPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVL--KRKSGPESD 149
           KPEN L     + S +K  DFG +  +  P   + D V + +Y +PE+L    + GP  D
Sbjct: 129 KPENILI---TKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVD 185
Query: 150 VWSIGVITYILLCGRRPFWDKTED----GIFKEVL-----RNKPDFRRKPW--------- 191
           VW+IG +   LL G  P W    D     + ++ L     R++  F    +         
Sbjct: 186 VWAIGCVFAELLSG-VPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDP 244
Query: 192 ----------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 224
                     P+IS  A   +K  L  DP  RLT  Q L HP+
Sbjct: 245 EDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPY 287

>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Novel Bosutinib Isoform 1, Previously Thought To Be Bosutinib Length = 293

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 93/192 (48%), Gaps = 16/192 (8%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           I  C GG + D I+ + D   TE    VV RQML      H   ++HRD+K  N L    
Sbjct: 87  IEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTL- 144
Query: 103 KEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVL---KRKSGP---ESDVWSIGV 155
             +  ++  DFG+S   +K  +K    +G+ Y++APEV+     K  P   ++D+WS+G+
Sbjct: 145 --EGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGI 202
Query: 156 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP--WPSISNSAKDFVKKLLVKDPRAR 213
               +     P  +     +  ++ ++ P     P  W   S   +DF+K  L K+P  R
Sbjct: 203 TLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKW---SVEFRDFLKIALDKNPETR 259
Query: 214 LTAAQALSHPWV 225
            +AAQ L HP+V
Sbjct: 260 PSAAQLLEHPFV 271

>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound Length = 279

Iteration: 1
 Score = 77.4 bits (189), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 99/194 (51%), Gaps = 15/194 (7%)
Query: 43  IRLCEGGELLDRIL-AKKDSRYTEKDAAVVVRQMLRVA-AECHL-----HGLVHRDMKPE 95
           +  CEGG+L   I    K+ +Y +++  + V   L +A  ECH      H ++HRD+KP 
Sbjct: 86  MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPA 145
Query: 96  NFLFKSAKEDSSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEVLKRKSGPE-SDVWSI 153
           N +F   K++  +K  DFGL+  +     F +  VG+ YY++PE + R S  E SD+WS+
Sbjct: 146 N-VFLDGKQN--VKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSL 202
Query: 154 GVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRAR 213
           G + Y L     PF   ++  +  ++   K  FRR P+   S+   + + ++L      R
Sbjct: 203 GCLLYELCALMPPFTAFSQKELAGKIREGK--FRRIPY-RYSDELNEIITRMLNLKDYHR 259
Query: 214 LTAAQALSHPWVRE 227
            +  + L +P + E
Sbjct: 260 PSVEEILENPLILE 273

>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a Resolution. Length = 352

Iteration: 1
 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 109/236 (46%), Gaps = 28/236 (11%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG+L+  I  +   ++    A     +++      H  G+V+RD+K +N L     +D  
Sbjct: 103 GGDLMYHI--QSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD---KDGH 157
Query: 108 LKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITYILLCGRR 165
           +K  DFG+      G  K  +  G+  Y+APE+L  +K     D WS GV+ Y +L G+ 
Sbjct: 158 IKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQS 217
Query: 166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL-SHPW 224
           PF  + E+ +F  +  + P + R  W  +   AKD + KL V++P  RL     +  HP 
Sbjct: 218 PFHGQDEEELFHSIRMDNPFYPR--W--LEKEAKDLLVKLFVREPEKRLGVRGDIRQHPL 273
Query: 225 VREGG----DASEI----------PIDISVLNNMRQFVKYSRLKQFALRALASTLD 266
            RE      +  EI          P D S  N  ++F+       FA RAL +++D
Sbjct: 274 FREINWEELERKEIDPPFRPKVKSPFDCS--NFDKEFLNEKPRLXFADRALINSMD 327

>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10 Bound To Su11274 Length = 302

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 93/192 (48%), Gaps = 16/192 (8%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           I  C GG + D I+ + D   TE    VV RQML      H   ++HRD+K  N L    
Sbjct: 95  IEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTL- 152
Query: 103 KEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVL---KRKSGP---ESDVWSIGV 155
             +  ++  DFG+S   +K  +K    +G+ Y++APEV+     K  P   ++D+WS+G+
Sbjct: 153 --EGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGI 210
Query: 156 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP--WPSISNSAKDFVKKLLVKDPRAR 213
               +     P  +     +  ++ ++ P     P  W   S   +DF+K  L K+P  R
Sbjct: 211 TLIEMAQIEPPHHELNPMRVLLKIAKSDPPTLLTPSKW---SVEFRDFLKIALDKNPETR 267
Query: 214 LTAAQALSHPWV 225
            +AAQ L HP+V
Sbjct: 268 PSAAQLLEHPFV 279

>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand Length = 279

Iteration: 1
 Score = 77.0 bits (188), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/194 (29%), Positives = 99/194 (51%), Gaps = 15/194 (7%)
Query: 43  IRLCEGGELLDRIL-AKKDSRYTEKDAAVVVRQMLRVA-AECHL-----HGLVHRDMKPE 95
           +  CEGG+L   I    K+ +Y +++  + V   L +A  ECH      H ++HRD+KP 
Sbjct: 86  MEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPA 145
Query: 96  NFLFKSAKEDSSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEVLKRKSGPE-SDVWSI 153
           N +F   K++  +K  DFGL+  +     F +  VG+ YY++PE + R S  E SD+WS+
Sbjct: 146 N-VFLDGKQN--VKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSL 202
Query: 154 GVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRAR 213
           G + Y L     PF   ++  +  ++   K  FRR P+   S+   + + ++L      R
Sbjct: 203 GCLLYELCALMPPFTAFSQKELAGKIREGK--FRRIPY-RYSDELNEIITRMLNLKDYHR 259
Query: 214 LTAAQALSHPWVRE 227
            +  + L +P + E
Sbjct: 260 PSVEEILENPLILE 273

>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With Staurosporine At 2a Resolution Length = 345

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 108/236 (45%), Gaps = 28/236 (11%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG+L+  I  +   ++    A     +++      H  G+V+RD+K +N L     +D  
Sbjct: 102 GGDLMYHI--QSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD---KDGH 156
Query: 108 LKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITYILLCGRR 165
           +K  DFG+      G  K     G+  Y+APE+L  +K     D WS GV+ Y +L G+ 
Sbjct: 157 IKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQS 216
Query: 166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL-SHPW 224
           PF  + E+ +F  +  + P + R  W  +   AKD + KL V++P  RL     +  HP 
Sbjct: 217 PFHGQDEEELFHSIRMDNPFYPR--W--LEKEAKDLLVKLFVREPEKRLGVRGDIRQHPL 272
Query: 225 VREGG----DASEI----------PIDISVLNNMRQFVKYSRLKQFALRALASTLD 266
            RE      +  EI          P D S  N  ++F+       FA RAL +++D
Sbjct: 273 FREINWEELERKEIDPPFRPKVKSPFDCS--NFDKEFLNEKPRLSFADRALINSMD 326

>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (Ttk) In Complex With A Pyrimido-Diazepin Ligand Length = 313

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 22/170 (12%)
Query: 73  RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---QDIV 129
           + ML      H HG+VH D+KP NFL      D  LK  DFG+++ ++P          V
Sbjct: 134 KNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDXXXVVKDSQV 189
Query: 130 GSAYYVAPEVLK-----RKSGPES-------DVWSIGVITYILLCGRRPFWDKTEDGIFK 177
           G+  Y+ PE +K     R++G          DVWS+G I Y +  G+ PF  +  + I K
Sbjct: 190 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISK 248
Query: 178 EVLRNKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 226
                 P+   + +P I     +D +K  L +DP+ R++  + L+HP+V+
Sbjct: 249 LHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297

>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With Atp Length = 342

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 22/170 (12%)
Query: 73  RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---QDIV 129
           + ML      H HG+VH D+KP NFL      D  LK  DFG+++ ++P          V
Sbjct: 162 KNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQV 217
Query: 130 GSAYYVAPEVLK-----RKSGPES-------DVWSIGVITYILLCGRRPFWDKTEDGIFK 177
           G+  Y+ PE +K     R++G          DVWS+G I Y +  G+ PF  +  + I K
Sbjct: 218 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISK 276
Query: 178 EVLRNKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 226
                 P+   + +P I     +D +K  L +DP+ R++  + L+HP+V+
Sbjct: 277 LHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325

>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715 Length = 317

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 22/170 (12%)
Query: 73  RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---QDIV 129
           + ML      H HG+VH D+KP NFL      D  LK  DFG+++ ++P          V
Sbjct: 118 KNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQV 173
Query: 130 GSAYYVAPEVLK-----RKSGPES-------DVWSIGVITYILLCGRRPFWDKTEDGIFK 177
           G+  Y+ PE +K     R++G          DVWS+G I Y +  G+ PF  +  + I K
Sbjct: 174 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISK 232
Query: 178 EVLRNKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 226
                 P+   + +P I     +D +K  L +DP+ R++  + L+HP+V+
Sbjct: 233 LHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 281

>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase (ttk) Length = 313

Iteration: 1
 Score = 76.3 bits (186), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 22/170 (12%)
Query: 73  RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---QDIV 129
           + ML      H HG+VH D+KP NFL      D  LK  DFG+++ ++P          V
Sbjct: 134 KNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQV 189
Query: 130 GSAYYVAPEVLK-----RKSGPES-------DVWSIGVITYILLCGRRPFWDKTEDGIFK 177
           G+  Y+ PE +K     R++G          DVWS+G I Y +  G+ PF  +  + I K
Sbjct: 190 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISK 248
Query: 178 EVLRNKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 226
                 P+   + +P I     +D +K  L +DP+ R++  + L+HP+V+
Sbjct: 249 LHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 297

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 88/201 (43%), Gaps = 34/201 (16%)
Query: 62  RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 121
           +++E+    +V QML+     H  G+VHRD+KP N    +  ED  LK  DFGL+     
Sbjct: 122 KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNL---AVNEDCELKILDFGLAR--HA 176
Query: 122 GKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRR-------------- 165
             +    V + +Y APEV+          D+WS+G I   +L G+               
Sbjct: 177 DAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQI 236
Query: 166 ---------PFWDKTEDGIFKEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRA 212
                     F  K  D   K  +++ P   RK +    P  S  A D ++K+L  D   
Sbjct: 237 LKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDK 296
Query: 213 RLTAAQALSHPWVREGGDASE 233
           RLTAAQAL+HP+     D  E
Sbjct: 297 RLTAAQALTHPFFEPFRDPEE 317

>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2- Yl)amino]benzamide Length = 320

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 22/170 (12%)
Query: 73  RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---QDIV 129
           + ML      H HG+VH D+KP NFL      D  LK  DFG+++ ++P          V
Sbjct: 114 KNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQV 169
Query: 130 GSAYYVAPEVLK-----RKSGPES-------DVWSIGVITYILLCGRRPFWDKTEDGIFK 177
           G+  Y+ PE +K     R++G          DVWS+G I Y +  G+ PF  +  + I K
Sbjct: 170 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISK 228
Query: 178 EVLRNKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 226
                 P+   + +P I     +D +K  L +DP+ R++  + L+HP+V+
Sbjct: 229 LHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 277

>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation Length = 293

Iteration: 1
 Score = 75.9 bits (185), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/201 (27%), Positives = 95/201 (47%), Gaps = 22/201 (10%)
Query: 29  RPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 88
           RP   VL L ++  ++     +L D I  +      E+ A     Q+L     CH  G++
Sbjct: 84  RPDSFVLILERMEPVQ-----DLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVL 136
Query: 89  HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK--RKSGP 146
           HRD+K EN L    +    LK  DFG    +K    + D  G+  Y  PE ++  R  G 
Sbjct: 137 HRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRVYSPPEWIRYHRYHGR 193
Query: 147 ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 206
            + VWS+G++ Y ++CG  PF         +E++R +  FR++    +S+  +  ++  L
Sbjct: 194 SAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR----VSSECQHLIRWCL 243
Query: 207 VKDPRARLTAAQALSHPWVRE 227
              P  R T  +  +HPW+++
Sbjct: 244 ALRPSDRPTFEEIQNHPWMQD 264

>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From Par-3 Length = 396

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 36/206 (17%)
Query: 43  IRLCEGGELL-----DRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 97
           I    GG+L+      R L ++ +R+   + ++ +  +       H  G+++RD+K +N 
Sbjct: 132 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL-------HERGIIYRDLKLDNV 184
Query: 98  LFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGV 155
           L  S   +  +K TD+G+  + ++PG       G+  Y+APE+L+ +  G   D W++GV
Sbjct: 185 LLDS---EGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGV 241
Query: 156 ITYILLCGRRPF---------WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 206
           + + ++ GR PF            TED +F+ +L  +    R    S+S  A   +K  L
Sbjct: 242 LMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKAASVLKSFL 297
Query: 207 VKDPRARLTA------AQALSHPWVR 226
            KDP+ RL        A    HP+ R
Sbjct: 298 NKDPKERLGCHPQTGFADIQGHPFFR 323

>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1 Catalytic Domain Apo Form Length = 390

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 22/170 (12%)
Query: 73  RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---QDIV 129
           + ML      H HG+VH D+KP NFL      D  LK  DFG+++ ++P          V
Sbjct: 162 KNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQV 217
Query: 130 GSAYYVAPEVLK-----RKSGPES-------DVWSIGVITYILLCGRRPFWDKTEDGIFK 177
           G+  Y+ PE +K     R++G          DVWS+G I Y +  G+ PF  +  + I K
Sbjct: 218 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISK 276
Query: 178 EVLRNKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 226
                 P+   + +P I     +D +K  L +DP+ R++  + L+HP+V+
Sbjct: 277 LHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325

>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain Length = 343

Iteration: 1
 Score = 75.9 bits (185), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 22/170 (12%)
Query: 73  RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---QDIV 129
           + ML      H HG+VH D+KP NFL      D  LK  DFG+++ ++P          V
Sbjct: 115 KNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQV 170
Query: 130 GSAYYVAPEVLK-----RKSGPES-------DVWSIGVITYILLCGRRPFWDKTEDGIFK 177
           G+  Y+ PE +K     R++G          DVWS+G I Y +  G+ PF  +  + I K
Sbjct: 171 GTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISK 229
Query: 178 EVLRNKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 226
                 P+   + +P I     +D +K  L +DP+ R++  + L+HP+V+
Sbjct: 230 LHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 278

>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a Mutant In Complex With Sp600125 Inhibitor Length = 390

Iteration: 1
 Score = 75.5 bits (184), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/170 (31%), Positives = 84/170 (49%), Gaps = 22/170 (12%)
Query: 73  RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---QDIV 129
           + ML      H HG+VH D+KP NFL      D  LK  DFG+++ ++P          V
Sbjct: 162 KNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIANQMQPDTTSVVKDSQV 217
Query: 130 GSAYYVAPEVLK-----RKSGPES-------DVWSIGVITYILLCGRRPFWDKTEDGIFK 177
           G+  Y+ PE +K     R++G          DVWS+G I Y +  G+ PF  +  + I K
Sbjct: 218 GAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPF-QQIINQISK 276
Query: 178 EVLRNKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 226
                 P+   + +P I     +D +K  L +DP+ R++  + L+HP+V+
Sbjct: 277 LHAIIDPNHEIE-FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQ 325

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 75.5 bits (184), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 42/205 (20%)
Query: 69  AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 128
           + ++ QML      H  G++HRD+KP N + KS   D +LK  DFGL+            
Sbjct: 122 SYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPY 178
Query: 129 VGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI---- 175
           V + YY APEV+      E+ D+WS+G I        IL  GR     W+K  + +    
Sbjct: 179 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 238
Query: 176 ----------FKEVLRNKPDFRRKPWPSI----------------SNSAKDFVKKLLVKD 209
                      +  + N+P +    +P +                ++ A+D + K+LV D
Sbjct: 239 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 298
Query: 210 PRARLTAAQALSHPWVREGGDASEI 234
           P  R++   AL HP++    D +E+
Sbjct: 299 PAKRISVDDALQHPYINVWYDPAEV 323

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 75.5 bits (184), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 42/205 (20%)
Query: 69  AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 128
           + ++ QML      H  G++HRD+KP N + KS   D +LK  DFGL+            
Sbjct: 129 SYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPY 185
Query: 129 VGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI---- 175
           V + YY APEV+      E+ D+WS+G I        IL  GR     W+K  + +    
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 176 ----------FKEVLRNKPDFRRKPWPSI----------------SNSAKDFVKKLLVKD 209
                      +  + N+P +    +P +                ++ A+D + K+LV D
Sbjct: 246 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 210 PRARLTAAQALSHPWVREGGDASEI 234
           P  R++   AL HP++    D +E+
Sbjct: 306 PAKRISVDDALQHPYINVWYDPAEV 330

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 75.5 bits (184), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 60/191 (31%), Positives = 84/191 (43%), Gaps = 44/191 (23%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH + ++HRD+KP+N L     +   LK  DFGL+  F  P   F   V + 
Sbjct: 116 QLLQGLAFCHENKILHRDLKPQNLLI---NKRGQLKLGDFGLARAFGIPVNTFSSEVVTL 172
Query: 133 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 190
           +Y AP+VL   R      D+WS G I   ++ G +P +  T D   +E L+   D    P
Sbjct: 173 WYRAPDVLMGSRTYSTSIDIWSCGCILAEMITG-KPLFPGTND---EEQLKLIFDIMGTP 228
Query: 191 ----WPSISNSAK------------------------------DFVKKLLVKDPRARLTA 216
               WPS++   K                              DF+  LL  +P  RL+A
Sbjct: 229 NESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSA 288
Query: 217 AQALSHPWVRE 227
            QAL HPW  E
Sbjct: 289 KQALHHPWFAE 299

>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical Protein Kinase C-Iota Length = 364

Iteration: 1
 Score = 75.5 bits (184), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 36/206 (17%)
Query: 43  IRLCEGGELL-----DRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 97
           I    GG+L+      R L ++ +R+   + ++ +  +       H  G+++RD+K +N 
Sbjct: 100 IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL-------HERGIIYRDLKLDNV 152
Query: 98  LFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGV 155
           L  S   +  +K TD+G+  + ++PG       G+  Y+APE+L+ +  G   D W++GV
Sbjct: 153 LLDS---EGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGV 209
Query: 156 ITYILLCGRRPF---------WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 206
           + + ++ GR PF            TED +F+ +L  +    R    S+S  A   +K  L
Sbjct: 210 LMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SMSVKAASVLKSFL 265
Query: 207 VKDPRARLTA------AQALSHPWVR 226
            KDP+ RL        A    HP+ R
Sbjct: 266 NKDPKERLGCLPQTGFADIQGHPFFR 291

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 75.1 bits (183), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 42/205 (20%)
Query: 69  AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 128
           + ++ QML      H  G++HRD+KP N + KS   D +LK  DFGL+            
Sbjct: 129 SYLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPY 185
Query: 129 VGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI---- 175
           V + YY APEV+      E+ D+WS+G I        IL  GR     W+K  + +    
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 176 ----------FKEVLRNKPDFRRKPWPSI----------------SNSAKDFVKKLLVKD 209
                      +  + N+P +    +P +                ++ A+D + K+LV D
Sbjct: 246 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 210 PRARLTAAQALSHPWVREGGDASEI 234
           P  R++   AL HP++    D +E+
Sbjct: 306 PAKRISVDDALQHPYINVWYDPAEV 330

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 75.1 bits (183), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 87/200 (43%), Gaps = 34/200 (17%)
Query: 63  YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 122
           ++E+    +V QML+     H  G+VHRD+KP N    +  ED  LK  DFGL+      
Sbjct: 141 FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNL---AVNEDCELKILDFGLAR--HAD 195
Query: 123 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRR--------------- 165
            +    V + +Y APEV+          D+WS+G I   +L G+                
Sbjct: 196 AEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQIL 255
Query: 166 --------PFWDKTEDGIFKEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRAR 213
                    F  K  D   K  +++ P   RK +    P  S  A D ++K+L  D   R
Sbjct: 256 KVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKR 315
Query: 214 LTAAQALSHPWVREGGDASE 233
           LTAAQAL+HP+     D  E
Sbjct: 316 LTAAQALTHPFFEPFRDPEE 335

>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor Length = 349

Iteration: 1
 Score = 75.1 bits (183), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 36/206 (17%)
Query: 43  IRLCEGGELL-----DRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 97
           I    GG+L+      R L ++ +R+   + ++ +  +       H  G+++RD+K +N 
Sbjct: 85  IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL-------HERGIIYRDLKLDNV 137
Query: 98  LFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGV 155
           L  S   +  +K TD+G+  + ++PG       G+  Y+APE+L+ +  G   D W++GV
Sbjct: 138 LLDS---EGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGV 194
Query: 156 ITYILLCGRRPF---------WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 206
           + + ++ GR PF            TED +F+ +L  +    R    S+S  A   +K  L
Sbjct: 195 LMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKAASVLKSFL 250
Query: 207 VKDPRARLTA------AQALSHPWVR 226
            KDP+ RL        A    HP+ R
Sbjct: 251 NKDPKERLGCHPQTGFADIQGHPFFR 276

>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain Length = 345

Iteration: 1
 Score = 75.1 bits (183), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 36/206 (17%)
Query: 43  IRLCEGGELL-----DRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 97
           I    GG+L+      R L ++ +R+   + ++ +  +       H  G+++RD+K +N 
Sbjct: 89  IEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL-------HERGIIYRDLKLDNV 141
Query: 98  LFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGV 155
           L  S   +  +K TD+G+  + ++PG       G+  Y+APE+L+ +  G   D W++GV
Sbjct: 142 LLDS---EGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFSVDWWALGV 198
Query: 156 ITYILLCGRRPF---------WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 206
           + + ++ GR PF            TED +F+ +L  +    R    S+S  A   +K  L
Sbjct: 199 LMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKAASVLKSFL 254
Query: 207 VKDPRARLTA------AQALSHPWVR 226
            KDP+ RL        A    HP+ R
Sbjct: 255 NKDPKERLGCHPQTGFADIQGHPFFR 280

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 74.7 bits (182), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 42/205 (20%)
Query: 69  AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 128
           + ++ QML      H  G++HRD+KP N + KS   D +LK  DFGL+            
Sbjct: 123 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPY 179
Query: 129 VGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI---- 175
           V + YY APEV+      E+ D+WS+G I        IL  GR     W+K  + +    
Sbjct: 180 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 239
Query: 176 ----------FKEVLRNKPDFRRKPWPSI----------------SNSAKDFVKKLLVKD 209
                      +  + N+P +    +P +                ++ A+D + K+LV D
Sbjct: 240 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 299
Query: 210 PRARLTAAQALSHPWVREGGDASEI 234
           P  R++   AL HP++    D +E+
Sbjct: 300 PAKRISVDDALQHPYINVWYDPAEV 324

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 74.7 bits (182), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 42/205 (20%)
Query: 69  AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 128
           + ++ QML      H  G++HRD+KP N + KS   D +LK  DFGL+            
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPY 185
Query: 129 VGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI---- 175
           V + YY APEV+      E+ D+WS+G I        IL  GR     W+K  + +    
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 176 ----------FKEVLRNKPDFRRKPWPSI----------------SNSAKDFVKKLLVKD 209
                      +  + N+P +    +P +                ++ A+D + K+LV D
Sbjct: 246 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 210 PRARLTAAQALSHPWVREGGDASEI 234
           P  R++   AL HP++    D +E+
Sbjct: 306 PAKRISVDDALQHPYINVWYDPAEV 330

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 74.7 bits (182), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 50/208 (24%)
Query: 69  AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 128
           + ++ QML      H  G++HRD+KP N + KS   D++LK  DFGL+            
Sbjct: 129 SYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPY 185
Query: 129 VGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEV 179
           V + YY APEV+      E+ D+WS+GVI   ++ G   F        W+K    + +++
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNK----VIEQL 241
Query: 180 LRNKPDFRRKPWPSI----------------------------------SNSAKDFVKKL 205
               P+F +K  P++                                  ++ A+D + K+
Sbjct: 242 GTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 206 LVKDPRARLTAAQALSHPWVREGGDASE 233
           LV D   R++  +AL HP++    D SE
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPSE 329

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 74.7 bits (182), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 42/205 (20%)
Query: 69  AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 128
           + ++ QML      H  G++HRD+KP N + KS   D +LK  DFGL+            
Sbjct: 130 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPY 186
Query: 129 VGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI---- 175
           V + YY APEV+      E+ D+WS+G I        IL  GR     W+K  + +    
Sbjct: 187 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 246
Query: 176 ----------FKEVLRNKPDFRRKPWPSI----------------SNSAKDFVKKLLVKD 209
                      +  + N+P +    +P +                ++ A+D + K+LV D
Sbjct: 247 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 306
Query: 210 PRARLTAAQALSHPWVREGGDASEI 234
           P  R++   AL HP++    D +E+
Sbjct: 307 PAKRISVDDALQHPYINVWYDPAEV 331

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 42/205 (20%)
Query: 69  AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 128
           + ++ QML      H  G++HRD+KP N + KS   D +LK  DFGL+            
Sbjct: 130 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPY 186
Query: 129 VGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI---- 175
           V + YY APEV+      E+ D+WS+G I        IL  GR     W+K  + +    
Sbjct: 187 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 246
Query: 176 ----------FKEVLRNKPDFRRKPWPSI----------------SNSAKDFVKKLLVKD 209
                      +  + N+P +    +P +                ++ A+D + K+LV D
Sbjct: 247 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 306
Query: 210 PRARLTAAQALSHPWVREGGDASEI 234
           P  R++   AL HP++    D +E+
Sbjct: 307 PAKRISVDDALQHPYINVWYDPAEV 331

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 42/205 (20%)
Query: 69  AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 128
           + ++ QML      H  G++HRD+KP N + KS   D +LK  DFGL+            
Sbjct: 123 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPY 179
Query: 129 VGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI---- 175
           V + YY APEV+      E+ D+WS+G I        IL  GR     W+K  + +    
Sbjct: 180 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 239
Query: 176 ----------FKEVLRNKPDFRRKPWPSI----------------SNSAKDFVKKLLVKD 209
                      +  + N+P +    +P +                ++ A+D + K+LV D
Sbjct: 240 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 299
Query: 210 PRARLTAAQALSHPWVREGGDASEI 234
           P  R++   AL HP++    D +E+
Sbjct: 300 PAKRISVDDALQHPYINVWYDPAEV 324

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 42/205 (20%)
Query: 69  AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 128
           + ++ QML      H  G++HRD+KP N + KS   D +LK  DFGL+            
Sbjct: 128 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPY 184
Query: 129 VGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI---- 175
           V + YY APEV+      E+ D+WS+G I        IL  GR     W+K  + +    
Sbjct: 185 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 244
Query: 176 ----------FKEVLRNKPDFRRKPWPSI----------------SNSAKDFVKKLLVKD 209
                      +  + N+P +    +P +                ++ A+D + K+LV D
Sbjct: 245 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 304
Query: 210 PRARLTAAQALSHPWVREGGDASEI 234
           P  R++   AL HP++    D +E+
Sbjct: 305 PAKRISVDDALQHPYINVWYDPAEV 329

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 42/205 (20%)
Query: 69  AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 128
           + ++ QML      H  G++HRD+KP N + KS   D +LK  DFGL+            
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPY 185
Query: 129 VGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI---- 175
           V + YY APEV+      E+ D+WS+G I        IL  GR     W+K  + +    
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 176 ----------FKEVLRNKPDFRRKPWPSI----------------SNSAKDFVKKLLVKD 209
                      +  + N+P +    +P +                ++ A+D + K+LV D
Sbjct: 246 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 210 PRARLTAAQALSHPWVREGGDASEI 234
           P  R++   AL HP++    D +E+
Sbjct: 306 PAKRISVDDALQHPYINVWYDPAEV 330

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 74.7 bits (182), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 42/205 (20%)
Query: 69  AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 128
           + ++ QML      H  G++HRD+KP N + KS   D +LK  DFGL+            
Sbjct: 122 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPY 178
Query: 129 VGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI---- 175
           V + YY APEV+      E+ D+WS+G I        IL  GR     W+K  + +    
Sbjct: 179 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 238
Query: 176 ----------FKEVLRNKPDFRRKPWPSI----------------SNSAKDFVKKLLVKD 209
                      +  + N+P +    +P +                ++ A+D + K+LV D
Sbjct: 239 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 298
Query: 210 PRARLTAAQALSHPWVREGGDASEI 234
           P  R++   AL HP++    D +E+
Sbjct: 299 PAKRISVDDALQHPYINVWYDPAEV 323

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 50/208 (24%)
Query: 69  AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 128
           + ++ QML      H  G++HRD+KP N + KS   D++LK  DFGL+            
Sbjct: 129 SYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPY 185
Query: 129 VGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEV 179
           V + YY APEV+      E+ D+WS+GVI   ++ G   F        W+K    + +++
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNK----VIEQL 241
Query: 180 LRNKPDFRRKPWPSI----------------------------------SNSAKDFVKKL 205
               P+F +K  P++                                  ++ A+D + K+
Sbjct: 242 GTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 206 LVKDPRARLTAAQALSHPWVREGGDASE 233
           LV D   R++  +AL HP++    D SE
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPSE 329

>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor Length = 276

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           Q+L     CH  G++HRD+K EN L    +    LK  DFG    +K    + D  G+  
Sbjct: 121 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 177
Query: 134 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 191
           Y  PE ++  R  G  + VWS+G++ Y ++CG  PF         +E++R +  FR++  
Sbjct: 178 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR-- 229
Query: 192 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
             +S+  +  ++  L   P  R T  +  +HPW+++
Sbjct: 230 --VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 263

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 115/271 (42%), Gaps = 55/271 (20%)
Query: 4   ILIGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGEL-LDRILAKKDSR 62
           +L+      N + ++N+ TP        ++ L + +L    LC+  ++ LD         
Sbjct: 113 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYL-VMELMDANLCQVIQMELDH-------- 163
Query: 63  YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 122
              +  + ++ QML      H  G++HRD+KP N + KS   D +LK  DFGL+      
Sbjct: 164 ---ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTS 217
Query: 123 KKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTED 173
                 V + YY APEV+      E+ D+WS+G I        IL  GR     W+K  +
Sbjct: 218 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 277
Query: 174 GI--------------FKEVLRNKPDFRRKPWPSI----------------SNSAKDFVK 203
            +               +  + N+P +    +P +                ++ A+D + 
Sbjct: 278 QLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLS 337
Query: 204 KLLVKDPRARLTAAQALSHPWVREGGDASEI 234
           K+LV DP  R++   AL HP++    D +E+
Sbjct: 338 KMLVIDPAKRISVDDALQHPYINVWYDPAEV 368

>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           Q+L     CH  G++HRD+K EN L    +    LK  DFG    +K    + D  G+  
Sbjct: 165 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 221
Query: 134 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 191
           Y  PE ++  R  G  + VWS+G++ Y ++CG  PF         +E++R +  FR++  
Sbjct: 222 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR-- 273
Query: 192 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
             +S+  +  ++  L   P  R T  +  +HPW+++
Sbjct: 274 --VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 307

>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7- Azaindole Length = 273

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 82/165 (49%), Gaps = 15/165 (9%)
Query: 65  EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 124
           E+ A     Q+L     CH  G++HRD+K EN L    +    LK  DFG    +K    
Sbjct: 109 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTV 165
Query: 125 FQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 182
           + D  G+  Y  PE ++  R  G  + VWS+G++ Y ++CG  PF     D   +E++R 
Sbjct: 166 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EEIIRG 219
Query: 183 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
           +  FR++    +S+  +  ++  L   P  R T  +  +HPW+++
Sbjct: 220 QVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260

>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha (Mrck Alpha) Length = 437

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/172 (29%), Positives = 89/172 (51%), Gaps = 19/172 (11%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG+LL  +L+K + R  E+ A   + +M+      H    VHRD+KP+N L      +  
Sbjct: 158 GGDLL-TLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDM---NGH 213
Query: 108 LKATDFGLSDFIKPGKKFQD--IVGSAYYVAPEVL------KRKSGPESDVWSIGVITYI 159
           ++  DFG    +      Q    VG+  Y++PE+L      K + GPE D WS+GV  Y 
Sbjct: 214 IRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYE 273
Query: 160 LLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS----ISNSAKDFVKKLLV 207
           +L G  PF+ ++    + +++ +K  F+   +P+    +S +AKD +++L+ 
Sbjct: 274 MLYGETPFYAESLVETYGKIMNHKERFQ---FPTQVTDVSENAKDLIRRLIC 322

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 42/205 (20%)
Query: 69  AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 128
           + ++ QML      H  G++HRD+KP N + KS   D +LK  DFGL+            
Sbjct: 167 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPY 223
Query: 129 VGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI---- 175
           V + YY APEV+      E+ D+WS+G I        IL  GR     W+K  + +    
Sbjct: 224 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 283
Query: 176 ----------FKEVLRNKPDFRRKPWPSI----------------SNSAKDFVKKLLVKD 209
                      +  + N+P +    +P +                ++ A+D + K+LV D
Sbjct: 284 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 343
Query: 210 PRARLTAAQALSHPWVREGGDASEI 234
           P  R++   AL HP++    D +E+
Sbjct: 344 PAKRISVDDALQHPYINVWYDPAEV 368

>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As Potent, Highly Selective And Orally Bioavailable Pim Kinases Inhibitors Length = 294

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           Q+L     CH  G++HRD+K EN L    +    LK  DFG    +K    + D  G+  
Sbjct: 123 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 179
Query: 134 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 191
           Y  PE ++  R  G  + VWS+G++ Y ++CG  PF         +E++R +  FR++  
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR-- 231
Query: 192 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
             +S+  +  ++  L   P  R T  +  +HPW+++
Sbjct: 232 --VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265

>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain Length = 313

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           Q+L     CH  G++HRD+K EN L    +    LK  DFG    +K    + D  G+  
Sbjct: 150 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 206
Query: 134 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 191
           Y  PE ++  R  G  + VWS+G++ Y ++CG  PF         +E++R +  FR++  
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR-- 258
Query: 192 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
             +S+  +  ++  L   P  R T  +  +HPW+++
Sbjct: 259 --VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292

>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small Molecule Inhibitor Length = 298

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 15/165 (9%)
Query: 65  EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 124
           E+ A     Q+L     CH  G++HRD+K EN L    +    LK  DFG    +K    
Sbjct: 114 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTV 170
Query: 125 FQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 182
           + D  G+  Y  PE ++  R  G  + VWS+G++ Y ++CG  PF         +E++R 
Sbjct: 171 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRG 224
Query: 183 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
           +  FR++    +S+  +  ++  L   P  R T  +  +HPW+++
Sbjct: 225 QVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265

>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As Potent Pim-1 Inhibitors Length = 299

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           Q+L     CH  G++HRD+K EN L    +    LK  DFG    +K    + D  G+  
Sbjct: 123 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 179
Query: 134 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 191
           Y  PE ++  R  G  + VWS+G++ Y ++CG  PF         +E++R +  FR++  
Sbjct: 180 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR-- 231
Query: 192 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
             +S+  +  ++  L   P  R T  +  +HPW+++
Sbjct: 232 --VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 265

>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target Of Aberrant Somatic Hypermutations In Diffuse Large Cell Lymphoma Length = 293

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           Q+L     CH  G++HRD+K EN L    +    LK  DFG    +K    + D  G+  
Sbjct: 122 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 178
Query: 134 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 191
           Y  PE ++  R  G  + VWS+G++ Y ++CG  PF         +E++R +  FR++  
Sbjct: 179 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR-- 230
Query: 192 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
             +S+  +  ++  L   P  R T  +  +HPW+++
Sbjct: 231 --VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 264

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 74.3 bits (181), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 42/204 (20%)
Query: 69  AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 128
           + ++ QML      H  G++HRD+KP N + KS   D +LK  DFGL+         +  
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMEPE 185
Query: 129 VGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGI---- 175
           V + YY APEV+      E+ D+WS+G I   ++C +  F        W+K  + +    
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 176 ----------FKEVLRNKPDFR----RKPWPSI------------SNSAKDFVKKLLVKD 209
                      +  + N+P +      K +P +            ++ A+D + K+LV D
Sbjct: 246 PAFMKKLQPTVRNYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 210 PRARLTAAQALSHPWVREGGDASE 233
              R++  +AL HP++    D SE
Sbjct: 306 ASKRISVDEALQHPYINVWYDPSE 329

>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution Length = 300

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           Q+L     CH  G++HRD+K EN L    +    LK  DFG    +K    + D  G+  
Sbjct: 137 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 193
Query: 134 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 191
           Y  PE ++  R  G  + VWS+G++ Y ++CG  PF         +E++R +  FR++  
Sbjct: 194 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR-- 245
Query: 192 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
             +S+  +  ++  L   P  R T  +  +HPW+++
Sbjct: 246 --VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 279

>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine Length = 273

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           Q+L     CH  G++HRD+K EN L    +    LK  DFG    +K    + D  G+  
Sbjct: 118 QVLEAVRHCHNXGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 174
Query: 134 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 191
           Y  PE ++  R  G  + VWS+G++ Y ++CG  PF     D   +E++R +  FR++  
Sbjct: 175 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EEIIRGQVFFRQR-- 226
Query: 192 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
             +S   +  ++  L   P  R T  +  +HPW+++
Sbjct: 227 --VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260

>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           Q+L     CH  G++HRD+K EN L    +    LK  DFG    +K    + D  G+  
Sbjct: 138 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 194
Query: 134 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 191
           Y  PE ++  R  G  + VWS+G++ Y ++CG  PF         +E++R +  FR++  
Sbjct: 195 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR-- 246
Query: 192 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
             +S+  +  ++  L   P  R T  +  +HPW+++
Sbjct: 247 --VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 280

>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1 Length = 328

Iteration: 1
 Score = 73.9 bits (180), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           Q+L     CH  G++HRD+K EN L    +    LK  DFG    +K    + D  G+  
Sbjct: 165 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 221
Query: 134 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 191
           Y  PE ++  R  G  + VWS+G++ Y ++CG  PF         +E++R +  FR++  
Sbjct: 222 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR-- 273
Query: 192 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
             +S+  +  ++  L   P  R T  +  +HPW+++
Sbjct: 274 --VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 307

>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid- Regulated Kinase 1 In Complex With Amp-Pnp Length = 373

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 11/171 (6%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGEL   +  +++  + E  A     ++       H   +V+RD+KPEN L  S      
Sbjct: 123 GGELFYHL--QRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDS---QGH 177
Query: 108 LKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRR 165
           +  TDFGL  + I+         G+  Y+APEVL ++    + D W +G + Y +L G  
Sbjct: 178 IVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLP 237
Query: 166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA 216
           PF+ +    ++  +L NKP   +   P+I+NSA+  ++ LL KD   RL A
Sbjct: 238 PFYSRNTAEMYDNIL-NKPLQLK---PNITNSARHLLEGLLQKDRTKRLGA 284

>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of P27kip1 Carboxy-Terminal Peptide Length = 320

Iteration: 1
 Score = 73.9 bits (180), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           Q+L     CH  G++HRD+K EN L    +    LK  DFG    +K    + D  G+  
Sbjct: 157 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 213
Query: 134 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 191
           Y  PE ++  R  G  + VWS+G++ Y ++CG  PF         +E++R +  FR++  
Sbjct: 214 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR-- 265
Query: 192 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
             +S+  +  ++  L   P  R T  +  +HPW+++
Sbjct: 266 --VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 299

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 36/211 (17%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K    +       + Q+LR     H   ++HRD+KP N L  +    S LK  DFGL+  
Sbjct: 119 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---SDLKICDFGLARV 175
Query: 119 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDK-- 170
             P         + V + +Y APE++    G     D+WS+G I   +L  R  F  K  
Sbjct: 176 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 235
Query: 171 ---------------TED---GI---FKEVLRNKPDFRRKPW----PSISNSAKDFVKKL 205
                           ED   GI    +  L + P   + PW    P+  + A D + K+
Sbjct: 236 LDQLNHILGILGSPSQEDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 295
Query: 206 LVKDPRARLTAAQALSHPWVREGGDASEIPI 236
           L  +P  R+   QAL+HP++ +  D S+ PI
Sbjct: 296 LTFNPHKRIEVEQALAHPYLAQYYDPSDEPI 326

>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546 Length = 308

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 80/165 (48%), Gaps = 15/165 (9%)
Query: 65  EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 124
           E+ A     Q+L     CH  G++HRD+K EN L    +    LK  DFG    +K    
Sbjct: 136 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTV 192
Query: 125 FQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 182
           + D  G+  Y  PE ++  R  G  + VWS+G++ Y ++CG  PF         +E++R 
Sbjct: 193 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRG 246
Query: 183 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
           +  FR++    +S   +  ++  L   P  R T  +  +HPW+++
Sbjct: 247 QVFFRQR----VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 287

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 42/204 (20%)
Query: 69  AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 128
           + ++ QML      H  G++HRD+KP N + KS   D +LK  DFGL+            
Sbjct: 123 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPY 179
Query: 129 VGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGI---- 175
           V + YY APEV+      E+ D+WS+G I   ++C +  F        W+K  + +    
Sbjct: 180 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPC 239
Query: 176 ----------FKEVLRNKPDFR----RKPWPSI------------SNSAKDFVKKLLVKD 209
                      +  + N+P +      K +P +            ++ A+D + K+LV D
Sbjct: 240 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 299
Query: 210 PRARLTAAQALSHPWVREGGDASE 233
              R++  +AL HP++    D SE
Sbjct: 300 ASKRISVDEALQHPYINVWYDPSE 323

>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With 4-(4- Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One Length = 328

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           Q+L     CH  G++HRD+K EN L    +    LK  DFG    +K    + D  G+  
Sbjct: 165 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 221
Query: 134 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 191
           Y  PE ++  R  G  + VWS+G++ Y ++CG  PF         +E++R +  FR++  
Sbjct: 222 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR-- 273
Query: 192 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
             +S   +  ++  L   P  R T  +  +HPW+++
Sbjct: 274 --VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 307

>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           Q+L     CH  G++HRD+K EN L    +    LK  DFG    +K    + D  G+  
Sbjct: 138 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 194
Query: 134 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 191
           Y  PE ++  R  G  + VWS+G++ Y ++CG  PF         +E++R +  FR++  
Sbjct: 195 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR-- 246
Query: 192 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
             +S   +  ++  L   P  R T  +  +HPW+++
Sbjct: 247 --VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 280

>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa Length = 300

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           Q+L     CH  G++HRD+K EN L    +    LK  DFG    +K    + D  G+  
Sbjct: 137 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 193
Query: 134 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 191
           Y  PE ++  R  G  + VWS+G++ Y ++CG  PF         +E++R +  FR++  
Sbjct: 194 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR-- 245
Query: 192 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
             +S   +  ++  L   P  R T  +  +HPW+++
Sbjct: 246 --VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 279

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 50/208 (24%)
Query: 69  AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 128
           + ++ QML      H  G++HRD+KP N + KS   D +LK  DFGL+            
Sbjct: 134 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPY 190
Query: 129 VGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEV 179
           V + YY APEV+      E+ D+WS+G I   ++C +  F        W+K    + +++
Sbjct: 191 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNK----VIEQL 246
Query: 180 LRNKPDFRRKPWPSI----------------------------------SNSAKDFVKKL 205
               P+F +K  P++                                  ++ A+D + K+
Sbjct: 247 GTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 306
Query: 206 LVKDPRARLTAAQALSHPWVREGGDASE 233
           LV D   R++  +AL HP++    D SE
Sbjct: 307 LVIDASKRISVDEALQHPYINVWYDPSE 334

>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With Inhibitor Length = 333

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           Q+L     CH  G++HRD+K EN L    +    LK  DFG    +K    + D  G+  
Sbjct: 170 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 226
Query: 134 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 191
           Y  PE ++  R  G  + VWS+G++ Y ++CG  PF         +E++R +  FR++  
Sbjct: 227 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR-- 278
Query: 192 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
             +S   +  ++  L   P  R T  +  +HPW+++
Sbjct: 279 --VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 312

>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From Crystallographic Fragment Screen Length = 301

Iteration: 1
 Score = 73.6 bits (179), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           Q+L     CH  G++HRD+K EN L    +    LK  DFG    +K    + D  G+  
Sbjct: 138 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 194
Query: 134 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 191
           Y  PE ++  R  G  + VWS+G++ Y ++CG  PF         +E++R +  FR++  
Sbjct: 195 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFRQR-- 246
Query: 192 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
             +S   +  ++  L   P  R T  +  +HPW+++
Sbjct: 247 --VSXECQHLIRWCLALRPXDRPTFEEIQNHPWMQD 280

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 92/204 (45%), Gaps = 42/204 (20%)
Query: 69  AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 128
           + ++ QML      H  G++HRD+KP N + KS   D +LK  DFGL+         +  
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMEPE 185
Query: 129 VGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGI---- 175
           V + YY APEV+      E+ D+WS+G I   ++C +  F        W+K  + +    
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 176 ----------FKEVLRNKPDFR----RKPWPSI------------SNSAKDFVKKLLVKD 209
                      +  + N+P +      K +P +            ++ A+D + K+LV D
Sbjct: 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 210 PRARLTAAQALSHPWVREGGDASE 233
              R++  +AL HP++    D SE
Sbjct: 306 ASKRISVDEALQHPYINVWYDPSE 329

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 89/211 (42%), Gaps = 36/211 (17%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K    +       + Q+LR     H   ++HRD+KP N L  +  +   LK  DFGL+  
Sbjct: 117 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARV 173
Query: 119 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 167
             P         + V + +Y APE++    G     D+WS+G I   +L  R     + +
Sbjct: 174 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 233
Query: 168 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 205
            D+     GI                 +  L + P   + PW    P+  + A D + K+
Sbjct: 234 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 293
Query: 206 LVKDPRARLTAAQALSHPWVREGGDASEIPI 236
           L  +P  R+   QAL+HP++ +  D S+ PI
Sbjct: 294 LTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 324

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 73.2 bits (178), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 89/211 (42%), Gaps = 36/211 (17%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K    +       + Q+LR     H   ++HRD+KP N L  +  +   LK  DFGL+  
Sbjct: 117 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARV 173
Query: 119 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 167
             P         + V + +Y APE++    G     D+WS+G I   +L  R     + +
Sbjct: 174 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 233
Query: 168 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 205
            D+     GI                 +  L + P   + PW    P+  + A D + K+
Sbjct: 234 LDQLNHILGILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 293
Query: 206 LVKDPRARLTAAQALSHPWVREGGDASEIPI 236
           L  +P  R+   QAL+HP++ +  D S+ PI
Sbjct: 294 LTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 324

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 89/211 (42%), Gaps = 36/211 (17%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K    +       + Q+LR     H   ++HRD+KP N L  +  +   LK  DFGL+  
Sbjct: 121 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARV 177
Query: 119 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 167
             P         + V + +Y APE++    G     D+WS+G I   +L  R     + +
Sbjct: 178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 237
Query: 168 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 205
            D+     GI                 +  L + P   + PW    P+  + A D + K+
Sbjct: 238 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 297
Query: 206 LVKDPRARLTAAQALSHPWVREGGDASEIPI 236
           L  +P  R+   QAL+HP++ +  D S+ PI
Sbjct: 298 LTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 328

>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1) Length = 448

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 87/148 (58%), Gaps = 12/148 (8%)
Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D + DG 
Sbjct: 304 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGDGT 362
Query: 325 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 381
           +DF EF+  T+   ++++ DSE+     + AF  FD D +G+I+  ELR    + G K +
Sbjct: 363 IDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 417
Query: 382 ---IDPLLEEADIDKDGRISLSEFRRLL 406
              +D ++ EADID DG+++  EF +++
Sbjct: 418 DEEVDEMIREADIDGDGQVNYEEFVQMM 445

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 89/211 (42%), Gaps = 36/211 (17%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K    +       + Q+LR     H   ++HRD+KP N L  +  +   LK  DFGL+  
Sbjct: 121 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARV 177
Query: 119 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 167
             P         + V + +Y APE++    G     D+WS+G I   +L  R     + +
Sbjct: 178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 237
Query: 168 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 205
            D+     GI                 +  L + P   + PW    P+  + A D + K+
Sbjct: 238 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 297
Query: 206 LVKDPRARLTAAQALSHPWVREGGDASEIPI 236
           L  +P  R+   QAL+HP++ +  D S+ PI
Sbjct: 298 LTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 328

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K    +       + Q+LR     H   ++HRD+KP N L  +      LK  DFGL+  
Sbjct: 117 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARV 173
Query: 119 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 167
             P         + V + +Y APE++    G     D+WS+G I   +L  R     + +
Sbjct: 174 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 233
Query: 168 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 205
            D+     GI                 +  L + P   + PW    P+  + A D + K+
Sbjct: 234 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 293
Query: 206 LVKDPRARLTAAQALSHPWVREGGDASEIPI 236
           L  +P  R+   QAL+HP++ +  D S+ PI
Sbjct: 294 LTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 324

>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM COMPLEX Length = 152

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 90/154 (58%), Gaps = 12/154 (7%)
Query: 259 RALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID 318
            A+A  L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D
Sbjct: 2   NAMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVD 60
Query: 319 CNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTG 377
            + +G +DF EF+  T+   ++++ DSE+  +R   AF  FD D +G+I+  ELR + T 
Sbjct: 61  ADGNGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTN 115
Query: 378 L-----KGSIDPLLEEADIDKDGRISLSEFRRLL 406
           L        +D ++ EADID DG+++  EF +++
Sbjct: 116 LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 149

>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 64  TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 123
           T+ D    + ++L+    CH  G++HRD+KP N +    ++   L+  D+GL++F  P +
Sbjct: 130 TDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQK--KLRLIDWGLAEFYHPAQ 187
Query: 124 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTED-------- 173
           ++   V S Y+  PE+L   +      D+WS+G +   ++  R PF+   ++        
Sbjct: 188 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIA 247
Query: 174 ---------GIFKEV-LRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 207
                    G  K+  +   P F        RK W +         +S  A D + KLL 
Sbjct: 248 KVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLR 307
Query: 208 KDPRARLTAAQALSHPW 224
            D + RLTA +A+ HP+
Sbjct: 308 YDHQQRLTAKEAMEHPY 324

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 89/211 (42%), Gaps = 36/211 (17%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K    +       + Q+LR     H   ++HRD+KP N L  +  +   LK  DFGL+  
Sbjct: 117 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKIXDFGLARV 173
Query: 119 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 167
             P         + V + +Y APE++    G     D+WS+G I   +L  R     + +
Sbjct: 174 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 233
Query: 168 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 205
            D+     GI                 +  L + P   + PW    P+  + A D + K+
Sbjct: 234 LDQLNHILGILGSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 293
Query: 206 LVKDPRARLTAAQALSHPWVREGGDASEIPI 236
           L  +P  R+   QAL+HP++ +  D S+ PI
Sbjct: 294 LTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 324

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 50/208 (24%)
Query: 69  AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 128
           + ++ QML      H  G++HRD+KP N + KS   D++LK  DFGL+            
Sbjct: 129 SYLLYQMLVGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPY 185
Query: 129 VGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEV 179
           V + YY APEV+      E+ D+WS+G I   ++ G   F        W+K    + +++
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK----VIEQL 241
Query: 180 LRNKPDFRRKPWPSI----------------------------------SNSAKDFVKKL 205
               P+F +K  P++                                  ++ A+D + K+
Sbjct: 242 GTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 206 LVKDPRARLTAAQALSHPWVREGGDASE 233
           LV D   R++  +AL HP++    D SE
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPSE 329

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 111/262 (42%), Gaps = 48/262 (18%)
Query: 5   LIGDTRSANCLDMVNLVTP--MLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSR 62
           L+   R  N + ++++ TP   L       +V+P            G  L +++  K  +
Sbjct: 77  LLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFM----------GTDLGKLM--KHEK 124
Query: 63  YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 122
             E     +V QML+     H  G++HRD+KP N    +  ED  LK  DFGL+   +  
Sbjct: 125 LGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNL---AVNEDCELKILDFGLAR--QAD 179
Query: 123 KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 180
            +    V + +Y APEV+    +     D+WS+G I   ++ G+  F         KE++
Sbjct: 180 SEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIM 239
Query: 181 R-----------------------NKPDFRRKPWPSISNSAK----DFVKKLLVKDPRAR 213
           +                         P+  +K + SI  +A     + ++K+LV D   R
Sbjct: 240 KVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQR 299
Query: 214 LTAAQALSHPWVREGGDASEIP 235
           +TA +AL+HP+     D  + P
Sbjct: 300 VTAGEALAHPYFESLHDTEDEP 321

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K    +       + Q+LR     H   ++HRD+KP N L  +      LK  DFGL+  
Sbjct: 125 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARV 181
Query: 119 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 167
             P         + V + +Y APE++    G     D+WS+G I   +L  R     + +
Sbjct: 182 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 241
Query: 168 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 205
            D+     GI                 +  L + P   + PW    P+  + A D + K+
Sbjct: 242 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 301
Query: 206 LVKDPRARLTAAQALSHPWVREGGDASEIPI 236
           L  +P  R+   QAL+HP++ +  D S+ PI
Sbjct: 302 LTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 332

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K    +       + Q+LR     H   ++HRD+KP N L  +      LK  DFGL+  
Sbjct: 117 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARV 173
Query: 119 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 167
             P         + V + +Y APE++    G     D+WS+G I   +L  R     + +
Sbjct: 174 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 233
Query: 168 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 205
            D+     GI                 +  L + P   + PW    P+  + A D + K+
Sbjct: 234 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 293
Query: 206 LVKDPRARLTAAQALSHPWVREGGDASEIPI 236
           L  +P  R+   QAL+HP++ +  D S+ PI
Sbjct: 294 LTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 324

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K    +       + Q+LR     H   ++HRD+KP N L  +      LK  DFGL+  
Sbjct: 121 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARV 177
Query: 119 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 167
             P         + V + +Y APE++    G     D+WS+G I   +L  R     + +
Sbjct: 178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 237
Query: 168 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 205
            D+     GI                 +  L + P   + PW    P+  + A D + K+
Sbjct: 238 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 297
Query: 206 LVKDPRARLTAAQALSHPWVREGGDASEIPI 236
           L  +P  R+   QAL+HP++ +  D S+ PI
Sbjct: 298 LTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 328

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/262 (24%), Positives = 111/262 (42%), Gaps = 55/262 (20%)
Query: 4   ILIGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGEL-LDRILAKKDSR 62
           +L+      N + ++N+ TP        ++ L + +L    LC+  ++ LD         
Sbjct: 75  VLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVM-ELMDANLCQVIQMELDH-------- 125
Query: 63  YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 122
              +  + ++ QML      H  G++HRD+KP N + KS   D +LK  DFGL+      
Sbjct: 126 ---ERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTS 179
Query: 123 KKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTED 173
                 V + YY APEV+      E+ D+WS+G I        IL  GR     W+K  +
Sbjct: 180 FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIE 239
Query: 174 GI--------------FKEVLRNKPDFRRKPWPSI----------------SNSAKDFVK 203
            +               +  + N+P +    +P +                ++ A+D + 
Sbjct: 240 QLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLS 299
Query: 204 KLLVKDPRARLTAAQALSHPWV 225
           K+LV DP  R++   AL HP++
Sbjct: 300 KMLVIDPAKRISVDDALQHPYI 321

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 89/211 (42%), Gaps = 36/211 (17%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K    +       + Q+LR     H   ++HRD+KP N L  +  +   LK  DFGL+  
Sbjct: 137 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXD---LKICDFGLARV 193
Query: 119 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 167
             P         + V + +Y APE++    G     D+WS+G I   +L  R     + +
Sbjct: 194 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 253
Query: 168 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 205
            D+     GI                 +  L + P   + PW    P+  + A D + K+
Sbjct: 254 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 313
Query: 206 LVKDPRARLTAAQALSHPWVREGGDASEIPI 236
           L  +P  R+   QAL+HP++ +  D S+ PI
Sbjct: 314 LTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 344

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/205 (27%), Positives = 90/205 (43%), Gaps = 44/205 (21%)
Query: 69  AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 128
           + ++ QML      H  G++HRD+KP N + KS   D +LK  DFGL+            
Sbjct: 127 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTASTNFMMTPY 183
Query: 129 VGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGI---- 175
           V + YY APEV+      E+ D+WS+G I   L+ G   F        W+K  + +    
Sbjct: 184 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPS 243
Query: 176 ------FKEVLRNKPDFRRKPWPSI---------------------SNSAKDFVKKLLVK 208
                  +  +RN  +  R  +P I                     ++ A+D + K+LV 
Sbjct: 244 AEFMAALQPTVRNYVE-NRPAYPGIAFEELFPDWIFPSESERDKIKTSQARDLLSKMLVI 302
Query: 209 DPRARLTAAQALSHPWVREGGDASE 233
           DP  R++  +AL HP++    D +E
Sbjct: 303 DPDKRISVDEALRHPYITVWYDPAE 327

>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 52/197 (26%), Positives = 90/197 (45%), Gaps = 38/197 (19%)
Query: 64  TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 123
           T+ D    + ++L+    CH  G++HRD+KP N +    ++   L+  D+GL++F  P +
Sbjct: 135 TDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQQK--KLRLIDWGLAEFYHPAQ 192
Query: 124 KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTED-------- 173
           ++   V S Y+  PE+L   +      D+WS+G +   ++  R PF+   ++        
Sbjct: 193 EYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIA 252
Query: 174 ---------GIFKEV-LRNKPDFR-------RKPWPS---------ISNSAKDFVKKLLV 207
                    G  K+  +   P F        RK W +         +S  A D + KLL 
Sbjct: 253 KVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLR 312
Query: 208 KDPRARLTAAQALSHPW 224
            D + RLTA +A+ HP+
Sbjct: 313 YDHQQRLTAKEAMEHPY 329

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K    +       + Q+LR     H   ++HRD+KP N L  +      LK  DFGL+  
Sbjct: 115 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARV 171
Query: 119 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 167
             P         + V + +Y APE++    G     D+WS+G I   +L  R     + +
Sbjct: 172 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 231
Query: 168 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 205
            D+     GI                 +  L + P   + PW    P+  + A D + K+
Sbjct: 232 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 291
Query: 206 LVKDPRARLTAAQALSHPWVREGGDASEIPI 236
           L  +P  R+   QAL+HP++ +  D S+ PI
Sbjct: 292 LTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 322

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 72.8 bits (177), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K    +       + Q+LR     H   ++HRD+KP N L  +      LK  DFGL+  
Sbjct: 115 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARV 171
Query: 119 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 167
             P         + V + +Y APE++    G     D+WS+G I   +L  R     + +
Sbjct: 172 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 231
Query: 168 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 205
            D+     GI                 +  L + P   + PW    P+  + A D + K+
Sbjct: 232 LDQLNHILGILGSPEQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 291
Query: 206 LVKDPRARLTAAQALSHPWVREGGDASEIPI 236
           L  +P  R+   QAL+HP++ +  D S+ PI
Sbjct: 292 LTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 322

>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1 Length = 415

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 19/176 (10%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG+LL  +L+K + +  E  A   + +M+      H    VHRD+KP+N L      +  
Sbjct: 158 GGDLL-TLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDV---NGH 213
Query: 108 LKATDFGLSDFIKPGKKFQD--IVGSAYYVAPEVLKR------KSGPESDVWSIGVITYI 159
           ++  DFG    +      Q    VG+  Y++PE+L+       K GPE D WS+GV  Y 
Sbjct: 214 IRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYE 273
Query: 160 LLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS----ISNSAKDFVKKLLVKDPR 211
           +L G  PF+ ++    + +++ ++  F+   +PS    +S  AKD +++L+    R
Sbjct: 274 MLYGETPFYAESLVETYGKIMNHEERFQ---FPSHVTDVSEEAKDLIQRLICSRER 326

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K    +       + Q+LR     H   ++HRD+KP N L  +      LK  DFGL+  
Sbjct: 122 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARV 178
Query: 119 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 167
             P         + V + +Y APE++    G     D+WS+G I   +L  R     + +
Sbjct: 179 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 238
Query: 168 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 205
            D+     GI                 +  L + P   + PW    P+  + A D + K+
Sbjct: 239 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 298
Query: 206 LVKDPRARLTAAQALSHPWVREGGDASEIPI 236
           L  +P  R+   QAL+HP++ +  D S+ PI
Sbjct: 299 LTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 329

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K    +       + Q+LR     H   ++HRD+KP N L  +      LK  DFGL+  
Sbjct: 119 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARV 175
Query: 119 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 167
             P         + V + +Y APE++    G     D+WS+G I   +L  R     + +
Sbjct: 176 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 235
Query: 168 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 205
            D+     GI                 +  L + P   + PW    P+  + A D + K+
Sbjct: 236 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 295
Query: 206 LVKDPRARLTAAQALSHPWVREGGDASEIPI 236
           L  +P  R+   QAL+HP++ +  D S+ PI
Sbjct: 296 LTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 326

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K    +       + Q+LR     H   ++HRD+KP N L  +      LK  DFGL+  
Sbjct: 123 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARV 179
Query: 119 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 167
             P         + V + +Y APE++    G     D+WS+G I   +L  R     + +
Sbjct: 180 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 239
Query: 168 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 205
            D+     GI                 +  L + P   + PW    P+  + A D + K+
Sbjct: 240 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 299
Query: 206 LVKDPRARLTAAQALSHPWVREGGDASEIPI 236
           L  +P  R+   QAL+HP++ +  D S+ PI
Sbjct: 300 LTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 330

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K    +       + Q+LR     H   ++HRD+KP N L  +      LK  DFGL+  
Sbjct: 114 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARV 170
Query: 119 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 167
             P         + V + +Y APE++    G     D+WS+G I   +L  R     + +
Sbjct: 171 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 230
Query: 168 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 205
            D+     GI                 +  L + P   + PW    P+  + A D + K+
Sbjct: 231 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 290
Query: 206 LVKDPRARLTAAQALSHPWVREGGDASEIPI 236
           L  +P  R+   QAL+HP++ +  D S+ PI
Sbjct: 291 LTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 321

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K    +       + Q+LR     H   ++HRD+KP N L  +      LK  DFGL+  
Sbjct: 121 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARV 177
Query: 119 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 167
             P         + V + +Y APE++    G     D+WS+G I   +L  R     + +
Sbjct: 178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 237
Query: 168 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 205
            D+     GI                 +  L + P   + PW    P+  + A D + K+
Sbjct: 238 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 297
Query: 206 LVKDPRARLTAAQALSHPWVREGGDASEIPI 236
           L  +P  R+   QAL+HP++ +  D S+ PI
Sbjct: 298 LTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 328

>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1), Lp(Linker 2) Length = 448

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 87/152 (57%), Gaps = 12/152 (7%)
Query: 261 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 320
           L   L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D +
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 358
Query: 321 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTG 377
            DG +DF EF+  T+   +++  DSE+     + AF  FD D +G+I+  ELR    + G
Sbjct: 359 GDGTIDFPEFL--TMMARKMKYTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLG 413
Query: 378 LKGS---IDPLLEEADIDKDGRISLSEFRRLL 406
            K +   +D ++ EADID DG+++  EF +++
Sbjct: 414 EKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 445

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 50/208 (24%)
Query: 69  AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 128
           + ++ QML      H  G++HRD+KP N + KS   D++LK  DFGL+            
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPY 185
Query: 129 VGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEV 179
           V + YY APEV+      E+ D+WS+G I   ++ G   F        W+K    + +++
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK----VIEQL 241
Query: 180 LRNKPDFRRKPWPSI----------------------------------SNSAKDFVKKL 205
               P+F +K  P++                                  ++ A+D + K+
Sbjct: 242 GTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 206 LVKDPRARLTAAQALSHPWVREGGDASE 233
           LV D   R++  +AL HP++    D SE
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPSE 329

>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin Length = 149

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 89/154 (57%), Gaps = 12/154 (7%)
Query: 261 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 320
           +A  L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D +
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 321 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 378
            +G +DF EF+  T+   ++++ DSE+  +R   AF  FD D +GFI+  ELR + T L 
Sbjct: 60  GNGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGFISAAELRHVMTNLG 114
Query: 379 ----KGSIDPLLEEADIDKDGRISLSEFRRLLRT 408
                  +D ++ EADID DG+++  EF  ++ T
Sbjct: 115 EKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTT 148

>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil Length = 433

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/176 (28%), Positives = 88/176 (50%), Gaps = 19/176 (10%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG+LL  +L+K + +  E  A   + +M+      H    VHRD+KP+N L      +  
Sbjct: 174 GGDLL-TLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPDNVLLDV---NGH 229
Query: 108 LKATDFGLSDFIKPGKKFQD--IVGSAYYVAPEVLKR------KSGPESDVWSIGVITYI 159
           ++  DFG    +      Q    VG+  Y++PE+L+       K GPE D WS+GV  Y 
Sbjct: 230 IRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYE 289
Query: 160 LLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS----ISNSAKDFVKKLLVKDPR 211
           +L G  PF+ ++    + +++ ++  F+   +PS    +S  AKD +++L+    R
Sbjct: 290 MLYGETPFYAESLVETYGKIMNHEERFQ---FPSHVTDVSEEAKDLIQRLICSRER 342

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K    +       + Q+LR     H   ++HRD+KP N L  +      LK  DFGL+  
Sbjct: 121 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARV 177
Query: 119 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 167
             P         + V + +Y APE++    G     D+WS+G I   +L  R     + +
Sbjct: 178 ADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 237
Query: 168 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 205
            D+     GI                 +  L + P   + PW    P+  + A D + K+
Sbjct: 238 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 297
Query: 206 LVKDPRARLTAAQALSHPWVREGGDASEIPI 236
           L  +P  R+   QAL+HP++ +  D S+ PI
Sbjct: 298 LTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 328

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 54/201 (26%), Positives = 86/201 (42%), Gaps = 36/201 (17%)
Query: 69  AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---- 124
              + Q+LR     H   ++HRD+KP N L  +      LK  DFGL+    P       
Sbjct: 131 CYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARVADPDHDHTGF 187
Query: 125 FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPFWDKTED--GI 175
             + V + +Y APE++    G     D+WS+G I   +L  R     + + D+     GI
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGI 247
Query: 176 F----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLT 215
                            +  L + P   + PW    P+  + A D + K+L  +P  R+ 
Sbjct: 248 LGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIE 307
Query: 216 AAQALSHPWVREGGDASEIPI 236
             QAL+HP++ +  D S+ PI
Sbjct: 308 VEQALAHPYLEQYYDPSDEPI 328

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K    +       + Q+LR     H   ++HRD+KP N L  +      LK  DFGL+  
Sbjct: 122 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARV 178
Query: 119 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 167
             P         + V + +Y APE++    G     D+WS+G I   +L  R     + +
Sbjct: 179 ADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 238
Query: 168 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 205
            D+     GI                 +  L + P   + PW    P+  + A D + K+
Sbjct: 239 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 298
Query: 206 LVKDPRARLTAAQALSHPWVREGGDASEIPI 236
           L  +P  R+   QAL+HP++ +  D S+ PI
Sbjct: 299 LTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 329

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 72.4 bits (176), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K    +       + Q+LR     H   ++HRD+KP N L  +      LK  DFGL+  
Sbjct: 137 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARV 193
Query: 119 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 167
             P         + V + +Y APE++    G     D+WS+G I   +L  R     + +
Sbjct: 194 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 253
Query: 168 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 205
            D+     GI                 +  L + P   + PW    P+  + A D + K+
Sbjct: 254 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 313
Query: 206 LVKDPRARLTAAQALSHPWVREGGDASEIPI 236
           L  +P  R+   QAL+HP++ +  D S+ PI
Sbjct: 314 LTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 344

>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2) Length = 448

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 87/152 (57%), Gaps = 12/152 (7%)
Query: 261 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 320
           L   L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D +
Sbjct: 300 LPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 358
Query: 321 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTG 377
            DG +DF EF+  T+   +++  DSE+     + AF  FD D +G+I+  ELR    + G
Sbjct: 359 GDGTIDFPEFL--TMMARKMKYTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLG 413
Query: 378 LKGS---IDPLLEEADIDKDGRISLSEFRRLL 406
            K +   +D ++ EADID DG+++  EF +++
Sbjct: 414 EKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 445

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 72.4 bits (176), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 91/208 (43%), Gaps = 50/208 (24%)
Query: 69  AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 128
           + ++ QML      H  G++HRD+KP N + KS   D++LK  DFGL+            
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DATLKILDFGLARTAGTSFMMTPY 185
Query: 129 VGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEV 179
           V + YY APEV+      E+ D+WS+G I   ++ G   F        W+K    + +++
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK----VIEQL 241
Query: 180 LRNKPDFRRKPWPSI----------------------------------SNSAKDFVKKL 205
               P+F +K  P++                                  ++ A+D + K+
Sbjct: 242 GTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 206 LVKDPRARLTAAQALSHPWVREGGDASE 233
           LV D   R++  +AL HP++    D SE
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPSE 329

>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6 Bound To Amppnp Length = 576

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 9/187 (4%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + L  GG+L   I     + + E  A     ++     + H   +V+RD+KPEN L    
Sbjct: 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLD-- 320
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILL 161
            +   ++ +D GL+  +  G+  +  VG+  Y+APEV+K +    S D W++G + Y ++
Sbjct: 321 -DHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMI 379
Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TA 216
            G+ PF  + +    +EV R   +   +     S  A+    +LL KDP  RL     +A
Sbjct: 380 AGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSA 439
Query: 217 AQALSHP 223
            +   HP
Sbjct: 440 REVKEHP 446

>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y Length = 449

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 86/148 (58%), Gaps = 12/148 (8%)
Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D + DG 
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGDGT 363
Query: 325 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 381
           +DF EF+  T+   +++  DSE+     + AF  FD D +G+I+  ELR    + G K +
Sbjct: 364 IDFPEFL--TMMARKMKYTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 418
Query: 382 ---IDPLLEEADIDKDGRISLSEFRRLL 406
              +D ++ EADID DG+++  EF +++
Sbjct: 419 DEEVDEMIREADIDGDGQVNYEEFVQMM 446

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 55/211 (26%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K    +       + Q+LR     H   ++HRD+KP N L  +      LK  DFGL+  
Sbjct: 119 KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT---CDLKICDFGLARV 175
Query: 119 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 167
             P         + V + +Y APE++    G     D+WS+G I   +L  R     + +
Sbjct: 176 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 235
Query: 168 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 205
            D+     GI                 +  L + P   + PW    P+  + A D + K+
Sbjct: 236 LDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKM 295
Query: 206 LVKDPRARLTAAQALSHPWVREGGDASEIPI 236
           L  +P  R+   QAL+HP++ +  D S+ PI
Sbjct: 296 LTFNPHKRIEVEQALAHPYLAQYYDPSDEPI 326

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 50/208 (24%)
Query: 69  AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 128
           + ++ QML      H  G++HRD+KP N + KS   D +LK  DFGL+            
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPY 185
Query: 129 VGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEV 179
           V + YY APEV+      E+ D+WS+G I   ++ G   F        W+K    + +++
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK----VIEQL 241
Query: 180 LRNKPDFRRKPWPSI----------------------------------SNSAKDFVKKL 205
               P+F +K  P++                                  ++ A+D + K+
Sbjct: 242 GTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 206 LVKDPRARLTAAQALSHPWVREGGDASE 233
           LV D   R++  +AL HP++    D SE
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPSE 329

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 50/208 (24%)
Query: 69  AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 128
           + ++ QML      H  G++HRD+KP N + KS   D +LK  DFGL+            
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPY 185
Query: 129 VGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEV 179
           V + YY APEV+      E+ D+WS+G I   ++ G   F        W+K    + +++
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK----VIEQL 241
Query: 180 LRNKPDFRRKPWPSI----------------------------------SNSAKDFVKKL 205
               P+F +K  P++                                  ++ A+D + K+
Sbjct: 242 GTPSPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 206 LVKDPRARLTAAQALSHPWVREGGDASE 233
           LV D   R++  +AL HP++    D SE
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPSE 329

>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium Indicator Rcamp Length = 440

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 86/148 (58%), Gaps = 12/148 (8%)
Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D + DG 
Sbjct: 296 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGDGT 354
Query: 325 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 381
           +DF EF+   +   ++++ DSE+     + AF  FD D +G+I+  ELR    + G K +
Sbjct: 355 IDFPEFL--IMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 409
Query: 382 ---IDPLLEEADIDKDGRISLSEFRRLL 406
              +D ++ EADID DG+++  EF +++
Sbjct: 410 DEEVDEMIREADIDGDGQVNYEEFVQMM 437

>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A New Way Of Making An Old Binding Mode Length = 179

Iteration: 1
 Score = 72.0 bits (175), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 89/152 (58%), Gaps = 12/152 (7%)
Query: 261 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 320
           +A  L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D +
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 321 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 378
            +G +DF EF+  T+   ++++ DSE+  +R   AF  FD D +G+I+  ELR + T L 
Sbjct: 60  GNGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNLG 114
Query: 379 ----KGSIDPLLEEADIDKDGRISLSEFRRLL 406
                  +D ++ EADID DG+++  EF +++
Sbjct: 115 EKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 55/188 (29%), Positives = 81/188 (43%), Gaps = 33/188 (17%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q++     CH H ++HRD+KPEN L     +   +K  DFG +     PG+ + D V + 
Sbjct: 132 QIINGIGFCHSHNIIHRDIKPENIL---VSQSGVVKLCDFGFARTLAAPGEVYDDEVATR 188
Query: 133 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF-WDKTEDGIF------------- 176
           +Y APE+L    K G   DVW+IG +   +  G   F  D   D ++             
Sbjct: 189 WYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRH 248
Query: 177 KEVLRNKPDF---------RRKP----WPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 223
           +E+    P F          R+P    +P +S    D  KK L  DP  R   A+ L H 
Sbjct: 249 QELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHD 308
Query: 224 WVREGGDA 231
           + +  G A
Sbjct: 309 FFQMDGFA 316

>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With Ly333531 Length = 312

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           Q+L     CH  G++HRD+K EN L    +    LK  DFG    +K    + D  G+  
Sbjct: 150 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 206
Query: 134 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 191
           Y  PE ++  R  G  + VWS+G++ Y ++CG  PF +  E+ I  +V      FR++  
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIGGQVF-----FRQR-- 258
Query: 192 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
             +S+  +  ++  L   P  R T  +  +HPW+++
Sbjct: 259 --VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292

>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors Length = 273

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 15/165 (9%)
Query: 65  EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 124
           E+ A     Q+L     CH  G++HRD+K EN L    +    LK  DFG    +K    
Sbjct: 109 EELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTV 165
Query: 125 FQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 182
           + D  G+  Y  PE ++  R  G  + VWS+G++ Y ++CG  PF     D   +E++  
Sbjct: 166 YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF---EHD---EEIIGG 219
Query: 183 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
           +  FR++    +S+  +  ++  L   P  R T  +  +HPW+++
Sbjct: 220 QVFFRQR----VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 260

>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6 In Complex With Sangivamycin Length = 576

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 88/187 (47%), Gaps = 9/187 (4%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + L  GG+L   I     + + E  A     ++     + H   +V+RD+KPEN L    
Sbjct: 263 LTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLD-- 320
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILL 161
            +   ++ +D GL+  +  G+  +  VG+  Y+APEV+K +    S D W++G + Y ++
Sbjct: 321 -DHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMI 379
Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TA 216
            G+ PF  + +    +EV R   +   +     S  A+    +LL KDP  RL     +A
Sbjct: 380 AGQSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSA 439
Query: 217 AQALSHP 223
            +   HP
Sbjct: 440 REVKEHP 446

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 71.6 bits (174), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 86/196 (43%), Gaps = 42/196 (21%)
Query: 69  AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 128
           + ++ QML      H  G++HRD+KP N + KS   D +LK  DFGL+            
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DXTLKILDFGLARTAGTSFMMTPY 185
Query: 129 VGSAYYVAPEVLKRKSGPES-DVWSIGVIT------YILLCGRRPF--WDKTEDGI---- 175
           V + YY APEV+      E+ D+WS+G I        IL  GR     W+K  + +    
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 245
Query: 176 ----------FKEVLRNKPDFRRKPWPSI----------------SNSAKDFVKKLLVKD 209
                      +  + N+P +    +P +                ++ A+D + K+LV D
Sbjct: 246 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID 305
Query: 210 PRARLTAAQALSHPWV 225
           P  R++   AL HP++
Sbjct: 306 PAKRISVDDALQHPYI 321

>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Pyrrolo[2,3- A]carbazole Ligand Length = 313

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           Q+L     CH  G++HRD+K EN L    +    LK  DFG    +K    + D  G+  
Sbjct: 151 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 207
Query: 134 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 191
           Y  PE ++  R  G  + VWS+G++ Y ++CG  PF +  E+ I  +V      FR++  
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIGGQVF-----FRQR-- 259
Query: 192 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
             +S+  +  ++  L   P  R T  +  +HPW+++
Sbjct: 260 --VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293

>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its Consensus Peptide Pimtide Length = 313

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           Q+L     CH  G++HRD+K EN L    +    LK  DFG    +K    + D  G+  
Sbjct: 150 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 206
Query: 134 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 191
           Y  PE ++  R  G  + VWS+G++ Y ++CG  PF +  E+ I  +V      FR++  
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIGGQVF-----FRQR-- 258
Query: 192 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
             +S+  +  ++  L   P  R T  +  +HPW+++
Sbjct: 259 --VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292

>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1) Length = 450

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 87/148 (58%), Gaps = 12/148 (8%)
Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D + +G 
Sbjct: 306 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 364
Query: 325 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 381
           +DF EF+  T+   ++++ DSE+     + AF  FD D +G+I+  ELR    + G K +
Sbjct: 365 IDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 419
Query: 382 ---IDPLLEEADIDKDGRISLSEFRRLL 406
              +D ++ EADID DG+++  EF +++
Sbjct: 420 DEEVDEMIREADIDGDGQVNYEEFVQMM 447

>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Beta Carboline Ligand I Length = 314

Iteration: 1
 Score = 71.6 bits (174), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 78/156 (50%), Gaps = 15/156 (9%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           Q+L     CH  G++HRD+K EN L    +    LK  DFG    +K    + D  G+  
Sbjct: 151 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 207
Query: 134 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 191
           Y  PE ++  R  G  + VWS+G++ Y ++CG  PF +  E+ I  +V      FR++  
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIGGQVF-----FRQR-- 259
Query: 192 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
             +S+  +  ++  L   P  R T  +  +HPW+++
Sbjct: 260 --VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293

>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER Length = 449

Iteration: 1
 Score = 71.6 bits (174), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 87/148 (58%), Gaps = 12/148 (8%)
Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D + +G 
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 363
Query: 325 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 381
           +DF EF+  T+   ++++ DSE+     + AF  FD D +G+I+  ELR    + G K +
Sbjct: 364 IDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 418
Query: 382 ---IDPLLEEADIDKDGRISLSEFRRLL 406
              +D ++ EADID DG+++  EF +++
Sbjct: 419 DEEVDEMIREADIDGDGQVNYEEFVQMM 446

>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1) Length = 449

Iteration: 1
 Score = 71.2 bits (173), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 87/148 (58%), Gaps = 12/148 (8%)
Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D + +G 
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 363
Query: 325 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 381
           +DF EF+  T+   ++++ DSE+     + AF  FD D +G+I+  ELR    + G K +
Sbjct: 364 IDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 418
Query: 382 ---IDPLLEEADIDKDGRISLSEFRRLL 406
              +D ++ EADID DG+++  EF +++
Sbjct: 419 DEEVDEMIREADIDGDGQVNYEEFVQMM 446

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 89/205 (43%), Gaps = 44/205 (21%)
Query: 69  AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 128
           + ++ QML      H  G++HRD+KP N + KS   D +LK  DFGL+            
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTACTNFMMTPY 185
Query: 129 VGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPF--------WDKTEDGI---- 175
           V + YY APEV L        D+WS+G I   L+ G   F        W+K  + +    
Sbjct: 186 VVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVIEQLGTPS 245
Query: 176 ------FKEVLRNKPDFRRKPWPSI---------------------SNSAKDFVKKLLVK 208
                  +  +RN  + R K +P I                     ++ A+D + K+LV 
Sbjct: 246 AEFMAALQPTVRNYVENRPK-YPGIKFEELFPDWIFPSESERDKIKTSQARDLLSKMLVI 304
Query: 209 DPRARLTAAQALSHPWVREGGDASE 233
           DP  R++  +AL HP++    D +E
Sbjct: 305 DPDKRISVDEALRHPYITVWYDPAE 329

>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound Calmodulin Length = 148

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 86/151 (56%), Gaps = 12/151 (7%)
Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 321
           A  L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D + 
Sbjct: 1   AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 322 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 378
           +G +DF EF+  +L   +++E DSE+  +    AF+ FD D +G I+  ELR + T L  
Sbjct: 60  NGTIDFPEFL--SLMARKMKEQDSEEELIE---AFKVFDRDGNGLISAAELRHVMTNLGE 114
Query: 379 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 406
                 +D ++ EADID DG I+  EF R++
Sbjct: 115 KLTDDEVDEMIREADIDGDGHINYEEFVRMM 145

>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8 Angstroms Resolution Length = 148

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 86/151 (56%), Gaps = 12/151 (7%)
Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 321
           A  L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D + 
Sbjct: 1   AQELTEEQIAEFKEAFALFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 322 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 378
           +G +DF EF+  +L   +++E DSE+  +    AF+ FD D +G I+  ELR + T L  
Sbjct: 60  NGTIDFPEFL--SLMARKMKEQDSEEELIE---AFKVFDRDGNGLISAAELRHVMTNLGE 114
Query: 379 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 406
                 +D ++ EADID DG I+  EF R++
Sbjct: 115 KLTDDEVDEMIREADIDGDGHINYEEFVRMM 145

>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And A Naphtho-Difuran Ligand Length = 313

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           Q+L     CH  G++HRD+K EN L    +    LK  DFG    +K    + D  G+  
Sbjct: 151 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 207
Query: 134 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 191
           Y  PE ++  R  G  + VWS+G++ Y ++CG  PF +  E+ I  +V      FR++  
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIGGQVF-----FRQR-- 259
Query: 192 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
             +S   +  ++  L   P  R T  +  +HPW+++
Sbjct: 260 --VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 50/208 (24%)
Query: 69  AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 128
           + ++ QML      H  G++HRD+KP N + KS   D +LK  DFGL+            
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPY 185
Query: 129 VGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEV 179
           V + YY APEV+      E+ D+WS+G I   ++ G   F        W+K    + +++
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK----VIEQL 241
Query: 180 LRNKPDFRRKPWPSI----------------------------------SNSAKDFVKKL 205
               P+F +K  P++                                  ++ A+D + K+
Sbjct: 242 GTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 301
Query: 206 LVKDPRARLTAAQALSHPWVREGGDASE 233
           LV D   R++  +AL HP++    D SE
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPSE 329

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 50/208 (24%)
Query: 69  AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 128
           + ++ QML      H  G++HRD+KP N + KS   D +LK  DFGL+            
Sbjct: 130 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPY 186
Query: 129 VGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEV 179
           V + YY APEV+      E+ D+WS+G I   ++ G   F        W+K    + +++
Sbjct: 187 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK----VIEQL 242
Query: 180 LRNKPDFRRKPWPSI----------------------------------SNSAKDFVKKL 205
               P+F +K  P++                                  ++ A+D + K+
Sbjct: 243 GTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 302
Query: 206 LVKDPRARLTAAQALSHPWVREGGDASE 233
           LV D   R++  +AL HP++    D SE
Sbjct: 303 LVIDASKRISVDEALQHPYINVWYDPSE 330

>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN- Dependent Protein Kinase Ii Delta In Complex With Calmodulin Length = 150

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 90/153 (58%), Gaps = 12/153 (7%)
Query: 260 ALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDC 319
           ++A  L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D 
Sbjct: 1   SMADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDA 59
Query: 320 NTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL 378
           + +G +DF EF+  T+   ++++ DSE+  +R   AF  FD D +G+I+  ELR + T L
Sbjct: 60  DGNGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNL 114
Query: 379 -----KGSIDPLLEEADIDKDGRISLSEFRRLL 406
                   +D ++ EADID DG+++  EF +++
Sbjct: 115 GEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 147

>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p Length = 148

Iteration: 1
 Score = 71.2 bits (173), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 88/151 (58%), Gaps = 12/151 (7%)
Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 321
           A  L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D + 
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 322 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 378
           DG +DF EF+  T+   ++++ DSE+  +R   AF  FD D +G+I+  ELR + T L  
Sbjct: 60  DGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNLGE 114
Query: 379 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 406
                 +D ++ EADID DG+++  EF +++
Sbjct: 115 KLTDEEVDEMIREADIDGDGQVNYEEFVQMM 145

>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide Complex Length = 148

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 87/151 (57%), Gaps = 12/151 (7%)
Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 321
           A  L DE++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D + 
Sbjct: 1   ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 322 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 378
           +G +DF EF+   L   ++++ DSE+   + + AF  FD D +GFI+  ELR + T L  
Sbjct: 60  NGTIDFPEFL--NLMARKMKDTDSEE---KLKEAFRVFDKDGNGFISAAELRHVMTNLGE 114
Query: 379 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 406
                 +D ++ EAD+D DG+++  EF +++
Sbjct: 115 KLTDEEVDEMIREADVDGDGQVNYEEFVQVM 145

>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261 Length = 313

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           Q+L     CH  G++HRD+K EN L    +    LK  DFG    +K    + D  G+  
Sbjct: 150 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 206
Query: 134 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 191
           Y  PE ++  R  G  + VWS+G++ Y ++CG  PF +  E+ I  +V      FR++  
Sbjct: 207 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIGGQVF-----FRQR-- 258
Query: 192 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
             +S   +  ++  L   P  R T  +  +HPW+++
Sbjct: 259 --VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 292

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  EDS LK  DFGL   
Sbjct: 118 KSQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDSELKILDFGLCR- 173
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 233 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 292
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 293 SDKRITAAQALAHAYFAQYHDPDDEPV 319

>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine Kinase (Pim1) In Complex With A Consensus Peptide And The Jnk Inhibitor V Length = 314

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/156 (30%), Positives = 77/156 (49%), Gaps = 15/156 (9%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           Q+L     CH  G++HRD+K EN L    +    LK  DFG    +K    + D  G+  
Sbjct: 151 QVLEAVRHCHNCGVLHRDIKDENILIDLNR--GELKLIDFGSGALLK-DTVYTDFDGTRV 207
Query: 134 YVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW 191
           Y  PE ++  R  G  + VWS+G++ Y ++CG  PF +  E+ I  +V      FR++  
Sbjct: 208 YSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPF-EHDEEIIGGQVF-----FRQR-- 259
Query: 192 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
             +S   +  ++  L   P  R T  +  +HPW+++
Sbjct: 260 --VSXECQHLIRWCLALRPSDRPTFEEIQNHPWMQD 293

>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure Length = 149

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 89/154 (57%), Gaps = 12/154 (7%)
Query: 261 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 320
           +A  L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D +
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 321 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 378
            +G +DF EF+  T+   ++++ DSE+  +R   AF  FD D +GFI+  ELR + T L 
Sbjct: 60  GNGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGFISAAELRHVMTNLG 114
Query: 379 ----KGSIDPLLEEADIDKDGRISLSEFRRLLRT 408
                  +D ++ EADID DG+++  EF  ++ +
Sbjct: 115 EKLTDEEVDEMIREADIDGDGQVNYEEFVTMMTS 148

>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2 Length = 411

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 87/148 (58%), Gaps = 12/148 (8%)
Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D + +G 
Sbjct: 268 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 326
Query: 325 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 381
           +DF EF+  T+   ++++ DSE+     + AF  FD D +G+I+  ELR    + G K +
Sbjct: 327 IDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 381
Query: 382 ---IDPLLEEADIDKDGRISLSEFRRLL 406
              +D ++ EADID DG+++  EF +++
Sbjct: 382 DEEVDEMIREADIDGDGQVNYEEFVQMM 409

>pdb|2YGG|B Chain B, Complex Of Cambr And Cam Length = 150

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 89/152 (58%), Gaps = 12/152 (7%)
Query: 261 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 320
           +A  L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D +
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 321 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 378
            +G +DF EF+  T+   ++++ DSE+  +R   AF  FD D +G+I+  ELR + T L 
Sbjct: 60  GNGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNLG 114
Query: 379 ----KGSIDPLLEEADIDKDGRISLSEFRRLL 406
                  +D ++ EADID DG+++  EF +++
Sbjct: 115 EKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146

>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation Mutant, Ef-delta 64 In Complex With Calmodulin Length = 149

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 89/152 (58%), Gaps = 12/152 (7%)
Query: 261 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 320
           +A  L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D +
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 321 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 378
            +G +DF EF+  T+   ++++ DSE+  +R   AF  FD D +G+I+  ELR + T L 
Sbjct: 60  GNGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNLG 114
Query: 379 ----KGSIDPLLEEADIDKDGRISLSEFRRLL 406
                  +D ++ EADID DG+++  EF +++
Sbjct: 115 EKLTDEEVDQMIREADIDGDGQVNYEEFVQMM 146

>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12) Length = 415

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 87/148 (58%), Gaps = 12/148 (8%)
Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D + +G 
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 329
Query: 325 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 381
           +DF EF+  T+   ++++ DSE+     + AF  FD D +G+I+  ELR    + G K +
Sbjct: 330 IDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 384
Query: 382 ---IDPLLEEADIDKDGRISLSEFRRLL 406
              +D ++ EADID DG+++  EF +++
Sbjct: 385 DEEVDEMIREADIDGDGQVNYEEFVQMM 412

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 88/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  EDS LK  DFGL+  
Sbjct: 124 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDSELKILDFGLAR- 179
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 180 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 238
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 239 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 298
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 299 SDKRITAAQALAHAYFAQYHDPDDEPV 325

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 50/208 (24%)
Query: 69  AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 128
           + ++ QML      H  G++HRD+KP N + KS   D +LK  DFGL+            
Sbjct: 131 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMVPF 187
Query: 129 VGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEV 179
           V + YY APEV+      E+ D+WS+G I   ++ G   F        W+K    + +++
Sbjct: 188 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK----VIEQL 243
Query: 180 LRNKPDFRRKPWPSI----------------------------------SNSAKDFVKKL 205
               P+F +K  P++                                  ++ A+D + K+
Sbjct: 244 GTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKM 303
Query: 206 LVKDPRARLTAAQALSHPWVREGGDASE 233
           LV D   R++  +AL HP++    D SE
Sbjct: 304 LVIDASKRISVDEALQHPYINVWYDPSE 331

>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16) Length = 415

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 87/148 (58%), Gaps = 12/148 (8%)
Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D + +G 
Sbjct: 271 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 329
Query: 325 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 381
           +DF EF+  T+   ++++ DSE+     + AF  FD D +G+I+  ELR    + G K +
Sbjct: 330 IDFPEFL--TMMARKMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 384
Query: 382 ---IDPLLEEADIDKDGRISLSEFRRLL 406
              +D ++ EADID DG+++  EF +++
Sbjct: 385 DEEVDEMIREADIDGDGQVNYEEFVQMM 412

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH H ++HRD+KPEN L  +   + ++K  DFGL+  F  P + +   V + 
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPENLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 167
Query: 133 YYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 179
           +Y APE+L   +      D+WS+G I   ++  R  F   +E D +F+         EV 
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 180 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
              + + PD++            K  P +    +  + ++L  DP  R++A  AL+HP+ 
Sbjct: 228 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 226 RE 227
           ++
Sbjct: 288 QD 289

>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE Fragment Length = 149

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 89/152 (58%), Gaps = 12/152 (7%)
Query: 261 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 320
           +A  L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D +
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 321 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 378
            +G +DF EF+  T+   ++++ DSE+  +R   AF  FD D +G+I+  ELR + T L 
Sbjct: 60  GNGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNLG 114
Query: 379 ----KGSIDPLLEEADIDKDGRISLSEFRRLL 406
                  +D ++ EADID DG+++  EF +++
Sbjct: 115 EKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH H ++HRD+KPEN L  +   + ++K  DFGL+  F  P + +   V + 
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPENLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 168
Query: 133 YYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 179
           +Y APE+L   +      D+WS+G I   ++  R  F   +E D +F+         EV 
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 228
Query: 180 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
              + + PD++            K  P +    +  + ++L  DP  R++A  AL+HP+ 
Sbjct: 229 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
Query: 226 RE 227
           ++
Sbjct: 289 QD 290

>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM COMPLEX Length = 150

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/152 (29%), Positives = 89/152 (58%), Gaps = 12/152 (7%)
Query: 261 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 320
           +A  L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D +
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 321 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 378
            +G +DF EF+  T+   ++++ DSE+  +R   AF  FD D +G+I+  ELR + T L 
Sbjct: 60  GNGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNLG 114
Query: 379 ----KGSIDPLLEEADIDKDGRISLSEFRRLL 406
                  +D ++ EADID DG+++  EF +++
Sbjct: 115 EKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146

>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y Length = 449

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 86/148 (58%), Gaps = 12/148 (8%)
Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D + +G 
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 363
Query: 325 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 381
           +DF EF+  T+   +++  DSE+     + AF  FD D +G+I+  ELR    + G K +
Sbjct: 364 IDFPEFL--TMMARKMKYTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 418
Query: 382 ---IDPLLEEADIDKDGRISLSEFRRLL 406
              +D ++ EADID DG+++  EF +++
Sbjct: 419 DEEVDEMIREADIDGDGQVNYEEFVQMM 446

>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w Length = 191

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 91/184 (49%), Gaps = 26/184 (14%)
Query: 238 ISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQAL 297
           I VL N + +    + ++ A+  +A   +D ++  L+  F  +D D  G I+ E++++ L
Sbjct: 19  IHVLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGL 78
Query: 298 AKD---LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQA 354
            KD   LP+         +L  ID +  G +D++EF+AA L   QL    S+K       
Sbjct: 79  EKDGLKLPYNFDL-----LLDQIDSDGSGKIDYTEFIAAALDRKQL----SKKL---IYC 126
Query: 355 AFEKFDIDRDGFITPEELR--MHTG-LKGSIDP--------LLEEADIDKDGRISLSEFR 403
           AF  FD+D DG IT  EL   ++ G  KG+I          ++ + D + DG+I   EF 
Sbjct: 127 AFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFS 186
Query: 404 RLLR 407
            +++
Sbjct: 187 EMMK 190

>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3, Cgd5_820 Length = 214

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 96/199 (48%), Gaps = 24/199 (12%)
Query: 233 EIPIDISVLNNMRQFVKYSRLKQFALRALASTL-DDEELADLRDQFDAIDVDKNGSISLE 291
           E+P   + + NMR+F    +L Q AL  +AS L   EE  +L D F  ID + +G +  +
Sbjct: 24  ELPSLANAIENMRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQ 83
Query: 292 EMRQALAK---------DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 342
           E+    +K         DLP    ES V  IL A D + +G +D+SEFV   +    L  
Sbjct: 84  ELIDGYSKLSGEEVAVFDLPQI--ESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLS 141
Query: 343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL----KGSIDPLLEEADIDKDGRIS 398
            D      + ++AF+KFD D +G I+ +EL    GL      +   ++   D + DG + 
Sbjct: 142 KD------KLESAFQKFDQDGNGKISVDELASVFGLDHLESKTWKEMISGIDSNNDGDVD 195
Query: 399 LSEFRRLLRTASISSRNVP 417
             EF ++++   + S N P
Sbjct: 196 FEEFCKMIQK--LCSNNEP 212

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/207 (28%), Positives = 88/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  EDS LK  DFGL+  
Sbjct: 120 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDSELKILDFGLAR- 175
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 176 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 234
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 235 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 294
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 295 SDKRITAAQALAHAYFAQYHDPDDEPV 321

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH H ++HRD+KPEN L  +   + ++K  DFGL+  F  P + +   V + 
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPENLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 168
Query: 133 YYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 179
           +Y APE+L   +      D+WS+G I   ++  R  F   +E D +F+         EV 
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 228
Query: 180 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
              + + PD++            K  P +    +  + ++L  DP  R++A  AL+HP+ 
Sbjct: 229 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
Query: 226 RE 227
           ++
Sbjct: 289 QD 290

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH H ++HRD+KPEN L  +   + ++K  DFGL+  F  P + +   V + 
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPENLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 170
Query: 133 YYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 179
           +Y APE+L   +      D+WS+G I   ++  R  F   +E D +F+         EV 
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 180 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
              + + PD++            K  P +    +  + ++L  DP  R++A  AL+HP+ 
Sbjct: 231 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 226 RE 227
           ++
Sbjct: 291 QD 292

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH H ++HRD+KPEN L  +   + ++K  DFGL+  F  P + +   V + 
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPENLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 169
Query: 133 YYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 179
           +Y APE+L   +      D+WS+G I   ++  R  F   +E D +F+         EV 
Sbjct: 170 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 229
Query: 180 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
              + + PD++            K  P +    +  + ++L  DP  R++A  AL+HP+ 
Sbjct: 230 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
Query: 226 RE 227
           ++
Sbjct: 290 QD 291

>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071 Length = 360

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/177 (25%), Positives = 86/177 (48%), Gaps = 11/177 (6%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +    GG+L+  I  ++  ++ E  A     ++       H  G+++RD+K +N +  S 
Sbjct: 99  MEYVNGGDLMYHI--QQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLDS- 155
Query: 103 KEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYIL 160
             +  +K  DFG+  + +  G   ++  G+  Y+APE++  +  G   D W+ GV+ Y +
Sbjct: 156 --EGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEM 213
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
           L G+ PF  + ED +F+ ++ +   + +    S+S  A    K L+ K P  RL   
Sbjct: 214 LAGQPPFDGEDEDELFQSIMEHNVSYPK----SLSKEAVSICKGLMTKHPAKRLGCG 266

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH H ++HRD+KP+N L  +   + ++K  DFGL+  F  P + +   V + 
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTL 167
Query: 133 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 179
           +Y APE+L   +      D+WS+G I   ++  R  F   +E D +F+         EV 
Sbjct: 168 WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 180 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
              + + PD++            K  P +    +  + ++L  DP  R++A  AL+HP+ 
Sbjct: 228 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 226 RE 227
           ++
Sbjct: 288 QD 289

>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER Length = 449

Iteration: 1
 Score = 70.1 bits (170), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/148 (29%), Positives = 86/148 (58%), Gaps = 12/148 (8%)
Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D + +G 
Sbjct: 305 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 363
Query: 325 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 381
           +DF EF+  T+    +++ DSE+     + AF  FD D +G+I+  ELR    + G K +
Sbjct: 364 IDFPEFL--TMMARWMKDTDSEE---EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLT 418
Query: 382 ---IDPLLEEADIDKDGRISLSEFRRLL 406
              +D ++ EADID DG+++  EF +++
Sbjct: 419 DEEVDEMIREADIDGDGQVNYEEFVQMM 446

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 90/208 (43%), Gaps = 50/208 (24%)
Query: 69  AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 128
           + ++ QML      H  G++HRD+KP N + KS   D +LK  DFGL+            
Sbjct: 129 SYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGLARTAGTSFMMTPE 185
Query: 129 VGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPF--------WDKTEDGIFKEV 179
           V + YY APEV+      E+ D+WS+G I   ++ G   F        W+K    + +++
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNK----VIEQL 241
Query: 180 LRNKPDFRRKPWPSI----------------------------------SNSAKDFVKKL 205
               P+F +K  P++                                  ++ A+D + K+
Sbjct: 242 GTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNALKASQARDLLSKM 301
Query: 206 LVKDPRARLTAAQALSHPWVREGGDASE 233
           LV D   R++  +AL HP++    D SE
Sbjct: 302 LVIDASKRISVDEALQHPYINVWYDPSE 329

>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex By Multidimensional Nmr Length = 148

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 88/153 (57%), Gaps = 12/153 (7%)
Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 321
           A  L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D + 
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 322 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 378
           +G +DF EF+  T+   ++++ DSE+  +R   AF  FD D +GFI+  ELR + T L  
Sbjct: 60  NGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGFISAAELRHVMTNLGE 114
Query: 379 ---KGSIDPLLEEADIDKDGRISLSEFRRLLRT 408
                 +D ++ EADID DG+++  EF  ++ +
Sbjct: 115 KLTDEEVDEMIREADIDGDGQVNYEEFVTMMTS 147

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH H ++HRD+KP+N L  +   + ++K  DFGL+  F  P + +   V + 
Sbjct: 118 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTL 174
Query: 133 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 179
           +Y APE+L   +      D+WS+G I   ++  R  F   +E D +F+         EV 
Sbjct: 175 WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 234
Query: 180 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
              + + PD++            K  P +    +  + ++L  DP  R++A  AL+HP+ 
Sbjct: 235 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 294
Query: 226 RE 227
           ++
Sbjct: 295 QD 296

>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle Myosin Light Chain Kinase From Combination Of Nmr And Aqueous And Contrast-matched Saxs Data Length = 148

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 87/151 (57%), Gaps = 12/151 (7%)
Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 321
           A  L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D + 
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 322 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 378
           +G +DF EF+  T+   ++++ DSE+  +R   AF  FD D +GFI+  ELR + T L  
Sbjct: 60  NGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGFISAAELRHVMTNLGE 114
Query: 379 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 406
                 +D ++ EADID DG+++  EF  ++
Sbjct: 115 KLTDEEVDEMIREADIDGDGQVNYEEFVTMM 145

>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide Complex Length = 148

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 86/151 (56%), Gaps = 12/151 (7%)
Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 321
           A  L DE++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D + 
Sbjct: 1   ADQLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 322 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 378
           +G +DF EF+   L   ++++ DSE+     + AF  FD D +GFI+  ELR + T L  
Sbjct: 60  NGTIDFPEFL--NLMARKMKDTDSEE---ELKEAFRVFDKDGNGFISAAELRHVMTNLGE 114
Query: 379 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 406
                 +D ++ EAD+D DG+++  EF +++
Sbjct: 115 KLTDEEVDEMIREADVDGDGQVNYEEFVQVM 145

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 78/181 (43%), Gaps = 29/181 (16%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           Q+LR  A  H  G+ HRD+KP+N L         LK  DFG +  +  G+     + S Y
Sbjct: 149 QLLRSLAYIHSIGICHRDIKPQNLLLDPP--SGVLKLIDFGSAKILIAGEPNVSXICSRY 206
Query: 134 YVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR---------- 181
           Y APE++   +   +  D+WS G +   L+ G+  F  ++      E+++          
Sbjct: 207 YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQI 266
Query: 182 ----------NKPDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 226
                       P  R  P+     P     A D + +LL   P ARLTA +AL HP+  
Sbjct: 267 KTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFD 326
Query: 227 E 227
           E
Sbjct: 327 E 327

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 118 KXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 173
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 233 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 292
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 293 SDKRITAAQALAHAYFAQYHDPDDEPV 319

>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State ( Crystal Form 2) Length = 149

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 89/154 (57%), Gaps = 12/154 (7%)
Query: 261 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 320
           +A  L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D +
Sbjct: 1   MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 321 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 378
            +G +DF EF+  T+   ++++ DSE+  +R   AF  FD D +GFI+  ELR + T L 
Sbjct: 60  GNGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGFISAAELRHVMTNLG 114
Query: 379 ----KGSIDPLLEEADIDKDGRISLSEFRRLLRT 408
                  +D ++ E+DID DG+++  EF  ++ +
Sbjct: 115 EKLTDEEVDEMIRESDIDGDGQVNYEEFVTMMTS 148

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 125 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 180
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 181 -HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 239
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 240 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 299
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 300 SDKRITAAQALAHAYFAQYHDPDDEPV 326

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 125 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 180
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 181 -HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 239
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 240 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 299
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 300 SDKRITAAQALAHAYFAQYHDPDDEPV 326

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 125 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 180
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 181 -HTADEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 239
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 240 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 299
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 300 SDKRITAAQALAHAYFAQYHDPDDEPV 326

>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide Length = 154

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 88/151 (58%), Gaps = 12/151 (7%)
Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 321
           A  L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D + 
Sbjct: 7   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 65
Query: 322 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 378
           +G +DF EF+  T+   ++++ DSE+  +R   AF  FD D +G+I+  ELR + T L  
Sbjct: 66  NGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNLGE 120
Query: 379 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 406
                 +D ++ EADID DG+++  EF +++
Sbjct: 121 KLTDEEVDEMIREADIDGDGQVNYEEFVQMM 151

>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement Length = 148

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 88/151 (58%), Gaps = 12/151 (7%)
Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 321
           A  L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D + 
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 322 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 378
           +G +DF EF+  T+   ++++ DSE+  +R   AF  FD D +G+I+  ELR + T L  
Sbjct: 60  NGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNLGE 114
Query: 379 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 406
                 +D ++ EADID DG+++  EF +++
Sbjct: 115 KLTDEEVDEMIREADIDGDGQVNYEEFVQMM 145

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH H ++HRD+KP+N L  +   + ++K  DFGL+  F  P + +   V + 
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTL 167
Query: 133 YYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 179
           +Y APE+L   +      D+WS+G I   ++  R  F   +E D +F+         EV 
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 180 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
              + + PD++            K  P +    +  + ++L  DP  R++A  AL+HP+ 
Sbjct: 228 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 226 RE 227
           ++
Sbjct: 288 QD 289

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH H ++HRD+KP+N L  +   + ++K  DFGL+  F  P + +   V + 
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTL 166
Query: 133 YYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 179
           +Y APE+L   +      D+WS+G I   ++  R  F   +E D +F+         EV 
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 180 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
              + + PD++            K  P +    +  + ++L  DP  R++A  AL+HP+ 
Sbjct: 227 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
Query: 226 RE 227
           ++
Sbjct: 287 QD 288

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 173
Query: 119 IKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 233 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 292
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 293 SDKRITAAQALAHAYFAQYHDPDDEPV 319

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH H ++HRD+KP+N L  +   + ++K  DFGL+  F  P + +   V + 
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 167
Query: 133 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 179
           +Y APE+L   +      D+WS+G I   ++  R  F   +E D +F+         EV 
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 180 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
              + + PD++            K  P +    +  + ++L  DP  R++A  AL+HP+ 
Sbjct: 228 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 226 RE 227
           ++
Sbjct: 288 QD 289

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH H ++HRD+KP+N L  +   + ++K  DFGL+  F  P + +   V + 
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTL 167
Query: 133 YYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 179
           +Y APE+L   +      D+WS+G I   ++  R  F   +E D +F+         EV 
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 180 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
              + + PD++            K  P +    +  + ++L  DP  R++A  AL+HP+ 
Sbjct: 228 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 226 RE 227
           ++
Sbjct: 288 QD 289

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH H ++HRD+KP+N L  +   + ++K  DFGL+  F  P + +   V + 
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTL 166
Query: 133 YYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 179
           +Y APE+L   +      D+WS+G I   ++  R  F   +E D +F+         EV 
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 180 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
              + + PD++            K  P +    +  + ++L  DP  R++A  AL+HP+ 
Sbjct: 227 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
Query: 226 RE 227
           ++
Sbjct: 287 QD 288

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH H ++HRD+KP+N L  +   + ++K  DFGL+  F  P + +   V + 
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTL 166
Query: 133 YYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 179
           +Y APE+L   +      D+WS+G I   ++  R  F   +E D +F+         EV 
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 180 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
              + + PD++            K  P +    +  + ++L  DP  R++A  AL+HP+ 
Sbjct: 227 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
Query: 226 RE 227
           ++
Sbjct: 287 QD 288

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH H ++HRD+KP+N L  +   + ++K  DFGL+  F  P + +   V + 
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 169
Query: 133 YYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 179
           +Y APE+L   +      D+WS+G I   ++  R  F   +E D +F+         EV 
Sbjct: 170 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 229
Query: 180 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
              + + PD++            K  P +    +  + ++L  DP  R++A  AL+HP+ 
Sbjct: 230 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
Query: 226 RE 227
           ++
Sbjct: 290 QD 291

>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A Compact Form Length = 149

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 88/151 (58%), Gaps = 12/151 (7%)
Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 321
           A  L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D + 
Sbjct: 2   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 60
Query: 322 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 378
           +G +DF EF+  T+   ++++ DSE+  +R   AF  FD D +G+I+  ELR + T L  
Sbjct: 61  NGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNLGE 115
Query: 379 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 406
                 +D ++ EADID DG+++  EF +++
Sbjct: 116 XLTDEEVDEMIREADIDGDGQVNYEEFVQMM 146

>pdb|1UP5|B Chain B, Chicken Calmodulin Length = 148

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 88/151 (58%), Gaps = 12/151 (7%)
Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 321
           A  L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D + 
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 322 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 378
           +G +DF EF+  T+   ++++ DSE+  +R   AF  FD D +G+I+  ELR + T L  
Sbjct: 60  NGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNLGE 114
Query: 379 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 406
                 +D ++ EADID DG+++  EF +++
Sbjct: 115 XLTDEEVDEMIREADIDGDGQVNYEEFVQMM 145

>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms Structure Of A Calmodulin-Peptide Complex Length = 147

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 88/151 (58%), Gaps = 12/151 (7%)
Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 321
           A  L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D + 
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 322 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 378
           +G +DF EF+  T+   ++++ DSE+  +R   AF  FD D +G+I+  ELR + T L  
Sbjct: 60  NGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNLGE 114
Query: 379 ---KGSIDPLLEEADIDKDGRISLSEFRRLL 406
                 +D ++ EADID DG+++  EF +++
Sbjct: 115 KLTDEEVDEMIREADIDGDGQVNYEEFVQMM 145

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH H ++HRD+KP+N L  +   + ++K  DFGL+  F  P + +   V + 
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTL 167
Query: 133 YYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 179
           +Y APE+L   +      D+WS+G I   ++  R  F   +E D +F+         EV 
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 180 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
              + + PD++            K  P +    +  + ++L  DP  R++A  AL+HP+ 
Sbjct: 228 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 226 RE 227
           ++
Sbjct: 288 QD 289

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 69.3 bits (168), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 118 KXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDXELKILDFGLAR- 173
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 233 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 292
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 293 SDKRITAAQALAHAYFAQYHDPDDEPV 319

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH H ++HRD+KP+N L  +   + ++K  DFGL+  F  P + +   V + 
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 170
Query: 133 YYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 179
           +Y APE+L   +      D+WS+G I   ++  R  F   +E D +F+         EV 
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 180 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
              + + PD++            K  P +    +  + ++L  DP  R++A  AL+HP+ 
Sbjct: 231 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 226 RE 227
           ++
Sbjct: 291 QD 292

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH H ++HRD+KP+N L  +   + ++K  DFGL+  F  P + +   V + 
Sbjct: 115 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTL 171
Query: 133 YYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 179
           +Y APE+L   +      D+WS+G I   ++  R  F   +E D +F+         EV 
Sbjct: 172 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 231
Query: 180 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
              + + PD++            K  P +    +  + ++L  DP  R++A  AL+HP+ 
Sbjct: 232 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 291
Query: 226 RE 227
           ++
Sbjct: 292 QD 293

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH H ++HRD+KP+N L  +   + ++K  DFGL+  F  P + +   V + 
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 167
Query: 133 YYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 179
           +Y APE+L   +      D+WS+G I   ++  R  F   +E D +F+         EV 
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 180 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
              + + PD++            K  P +    +  + ++L  DP  R++A  AL+HP+ 
Sbjct: 228 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 226 RE 227
           ++
Sbjct: 288 QD 289

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH H ++HRD+KP+N L  +   + ++K  DFGL+  F  P + +   V + 
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 166
Query: 133 YYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 179
           +Y APE+L   +      D+WS+G I   ++  R  F   +E D +F+         EV 
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 180 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
              + + PD++            K  P +    +  + ++L  DP  R++A  AL+HP+ 
Sbjct: 227 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
Query: 226 RE 227
           ++
Sbjct: 287 QD 288

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 84/193 (43%), Gaps = 32/193 (16%)
Query: 67  DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK-PGKKF 125
           +  + + Q+LR  A CH   ++HRD+KP+N L     E   LK  DFGL+     P K +
Sbjct: 101 NVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLI---NERGELKLADFGLARAKSIPTKTY 157
Query: 126 QDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-- 181
            + V + +Y  P++L   +    + D+W +G I Y +  GR  F   T +     + R  
Sbjct: 158 DNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRIL 217
Query: 182 --------------------NKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAA 217
                               N P +R +      P + +   D + KLL  + R R++A 
Sbjct: 218 GTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAE 277
Query: 218 QALSHPWVREGGD 230
            A+ HP+    G+
Sbjct: 278 DAMKHPFFLSLGE 290

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH H ++HRD+KP+N L  +   + ++K  DFGL+  F  P + +   V + 
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTL 168
Query: 133 YYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 179
           +Y APE+L   +      D+WS+G I   ++  R  F   +E D +F+         EV 
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 228
Query: 180 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
              + + PD++            K  P +    +  + ++L  DP  R++A  AL+HP+ 
Sbjct: 229 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
Query: 226 RE 227
           ++
Sbjct: 289 QD 290

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH H ++HRD+KP+N L  +   + ++K  DFGL+  F  P + +   V + 
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTL 166
Query: 133 YYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 179
           +Y APE+L   +      D+WS+G I   ++  R  F   +E D +F+         EV 
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 180 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
              + + PD++            K  P +    +  + ++L  DP  R++A  AL+HP+ 
Sbjct: 227 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
Query: 226 RE 227
           ++
Sbjct: 287 QD 288

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH H ++HRD+KP+N L  +   + ++K  DFGL+  F  P + +   V + 
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 168
Query: 133 YYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 179
           +Y APE+L   +      D+WS+G I   ++  R  F   +E D +F+         EV 
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 228
Query: 180 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
              + + PD++            K  P +    +  + ++L  DP  R++A  AL+HP+ 
Sbjct: 229 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
Query: 226 RE 227
           ++
Sbjct: 289 QD 290

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH H ++HRD+KP+N L  +   + ++K  DFGL+  F  P + +   V + 
Sbjct: 112 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 168
Query: 133 YYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 179
           +Y APE+L   +      D+WS+G I   ++  R  F   +E D +F+         EV 
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 228
Query: 180 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
              + + PD++            K  P +    +  + ++L  DP  R++A  AL+HP+ 
Sbjct: 229 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 288
Query: 226 RE 227
           ++
Sbjct: 289 QD 290

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH H ++HRD+KP+N L  +   + ++K  DFGL+  F  P + +   V + 
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 167
Query: 133 YYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 179
           +Y APE+L   +      D+WS+G I   ++  R  F   +E D +F+         EV 
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 180 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
              + + PD++            K  P +    +  + ++L  DP  R++A  AL+HP+ 
Sbjct: 228 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 226 RE 227
           ++
Sbjct: 288 QD 289

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH H ++HRD+KP+N L  +   + ++K  DFGL+  F  P + +   V + 
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 170
Query: 133 YYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 179
           +Y APE+L   +      D+WS+G I   ++  R  F   +E D +F+         EV 
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 180 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
              + + PD++            K  P +    +  + ++L  DP  R++A  AL+HP+ 
Sbjct: 231 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 226 RE 227
           ++
Sbjct: 291 QD 292

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH H ++HRD+KP+N L  +   + ++K  DFGL+  F  P + +   V + 
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 169
Query: 133 YYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 179
           +Y APE+L   +      D+WS+G I   ++  R  F   +E D +F+         EV 
Sbjct: 170 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 229
Query: 180 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
              + + PD++            K  P +    +  + ++L  DP  R++A  AL+HP+ 
Sbjct: 230 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
Query: 226 RE 227
           ++
Sbjct: 290 QD 291

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH H ++HRD+KP+N L  +   + ++K  DFGL+  F  P + +   V + 
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 170
Query: 133 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 179
           +Y APE+L   +      D+WS+G I   ++  R  F   +E D +F+         EV 
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 180 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
              + + PD++            K  P +    +  + ++L  DP  R++A  AL+HP+ 
Sbjct: 231 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 226 RE 227
           ++
Sbjct: 291 QD 292

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH H ++HRD+KP+N L  +   + ++K  DFGL+  F  P + +   V + 
Sbjct: 110 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 166
Query: 133 YYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 179
           +Y APE+L   +      D+WS+G I   ++  R  F   +E D +F+         EV 
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 226
Query: 180 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
              + + PD++            K  P +    +  + ++L  DP  R++A  AL+HP+ 
Sbjct: 227 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 286
Query: 226 RE 227
           ++
Sbjct: 287 QD 288

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH H ++HRD+KP+N L  +   + ++K  DFGL+  F  P + +   V + 
Sbjct: 111 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 167
Query: 133 YYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 179
           +Y APE+L   +      D+WS+G I   ++  R  F   +E D +F+         EV 
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 180 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
              + + PD++            K  P +    +  + ++L  DP  R++A  AL+HP+ 
Sbjct: 228 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 226 RE 227
           ++
Sbjct: 288 QD 289

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH H ++HRD+KP+N L  +   + ++K  DFGL+  F  P + +   V + 
Sbjct: 118 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTL 174
Query: 133 YYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 179
           +Y APE+L   +      D+WS+G I   ++  R  F   +E D +F+         EV 
Sbjct: 175 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 234
Query: 180 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
              + + PD++            K  P +    +  + ++L  DP  R++A  AL+HP+ 
Sbjct: 235 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 294
Query: 226 RE 227
           ++
Sbjct: 295 QD 296

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH H ++HRD+KP+N L  +   + ++K  DFGL+  F  P + +   V + 
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 170
Query: 133 YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 179
           +Y APE+L   +      D+WS+G I   ++  R  F   +E D +F+         EV 
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 180 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
              + + PD++            K  P +    +  + ++L  DP  R++A  AL+HP+ 
Sbjct: 231 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 226 RE 227
           ++
Sbjct: 291 QD 292

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH H ++HRD+KP+N L  +   + ++K  DFGL+  F  P + +   V + 
Sbjct: 115 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 171
Query: 133 YYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 179
           +Y APE+L   +      D+WS+G I   ++  R  F   +E D +F+         EV 
Sbjct: 172 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 231
Query: 180 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
              + + PD++            K  P +    +  + ++L  DP  R++A  AL+HP+ 
Sbjct: 232 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 291
Query: 226 RE 227
           ++
Sbjct: 292 QD 293

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH H ++HRD+KP+N L  +   + ++K  DFGL+  F  P + +   V + 
Sbjct: 113 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 169
Query: 133 YYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 179
           +Y APE+L   +      D+WS+G I   ++  R  F   +E D +F+         EV 
Sbjct: 170 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 229
Query: 180 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
              + + PD++            K  P +    +  + ++L  DP  R++A  AL+HP+ 
Sbjct: 230 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 289
Query: 226 RE 227
           ++
Sbjct: 290 QD 291

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 173
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 174 -HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 233 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 292
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 293 SDKRITAAQALAHAYFAQYHDPDDEPV 319

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/182 (28%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  A CH H ++HRD+KP+N L  +   + ++K  DFGL+  F  P + +   V + 
Sbjct: 114 QLLQGLAFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYXHEVVTL 170
Query: 133 YYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 179
           +Y APE+L   +      D+WS+G I   ++  R  F   +E D +F+         EV 
Sbjct: 171 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 230
Query: 180 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
              + + PD++            K  P +    +  + ++L  DP  R++A  AL+HP+ 
Sbjct: 231 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 290
Query: 226 RE 227
           ++
Sbjct: 291 QD 292

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 124 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 179
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 180 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 238
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 239 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 298
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 299 SDKRITAAQALAHAYFAQYHDPDDEPV 325

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 173
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 233 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 292
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 293 SDKRITAAQALAHAYFAQYHDPDDEPV 319

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 68.9 bits (167), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 173
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 233 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 292
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 293 SDKRITAAQALAHAYFAQYHDPDDEPV 319

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 123 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 178
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 179 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 237
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 238 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 297
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 298 SDKRITAAQALAHAYFAQYHDPDDEPV 324

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 123 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 178
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 179 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 237
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 238 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 297
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 298 SDKRITAAQALAHAYFAQYHDPDDEPV 324

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 173
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 233 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 292
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 293 SDKRITAAQALAHAYFAQYHDPDDEPV 319

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 117 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 172
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 173 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 231
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 232 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 291
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 292 SDKRITAAQALAHAYFAQYHDPDDEPV 318

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 173
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 233 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 292
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 293 SDKRITAAQALAHAYFAQYHDPDDEPV 319

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 173
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 233 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 292
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 293 SDKRITAAQALAHAYFAQYHDPDDEPV 319

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 173
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 233 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 292
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 293 SDKRITAAQALAHAYFAQYHDPDDEPV 319

>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase Length = 149

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 44/152 (28%), Positives = 87/152 (57%), Gaps = 12/152 (7%)
Query: 261 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 320
           +A  L D+++++ ++ F   D D +G I+ +E+   + + L     E+ + +++  +D +
Sbjct: 1   MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 321 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 378
            +G +DF EF+   L   ++++ DSE+     + AF  FD D++GFI+  ELR + T L 
Sbjct: 60  GNGTIDFPEFL--NLMARKMKDTDSEE---ELKEAFRVFDKDQNGFISAAELRHVMTNLG 114
Query: 379 ----KGSIDPLLEEADIDKDGRISLSEFRRLL 406
                  +D ++ EAD+D DG+I+  EF +++
Sbjct: 115 EKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 125 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 180
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 181 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 239
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 240 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 299
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 300 SDKRITAAQALAHAYFAQYHDPDDEPV 326

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 124 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 179
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 180 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 238
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 239 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 298
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 299 SDKRITAAQALAHAYFAQYHDPDDEPV 325

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 141 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARH 197
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 198 TD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 255
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 256 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 315
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 316 SDKRITAAQALAHAYFAQYHDPDDEPV 342

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 141 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 196
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 197 -HTDDEMXGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 255
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 256 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 315
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 316 SDKRITAAQALAHAYFAQYHDPDDEPV 342

>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP Length = 311

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 84/188 (44%), Gaps = 9/188 (4%)
Query: 54  RILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 113
           R +   +   T K A  V+    +     H +G++HRD+KP N +  +    +++K  DF
Sbjct: 104 RDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT---NAVKVMDF 160
Query: 114 GLSDFIKPG----KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFW 168
           G++  I        +   ++G+A Y++PE  +  S    SDV+S+G + Y +L G  PF 
Sbjct: 161 GIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT 220
Query: 169 DKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR-E 227
             + D +  + +R  P         +S      V K L K+P  R   A  +    VR  
Sbjct: 221 GDSPDSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280
Query: 228 GGDASEIP 235
            G+  E P
Sbjct: 281 NGEPPEAP 288

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 115 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 170
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 171 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 229
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 230 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 289
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 290 SDKRITAAQALAHAYFAQYHDPDDEPV 316

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 173
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 174 -HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 233 KLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLD 292
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 293 SDKRITAAQALAHAYFAQYHDPDDEPV 319

>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 49/169 (28%), Positives = 87/169 (51%), Gaps = 14/169 (8%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN +     +   
Sbjct: 125 GGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI---DQQGY 179
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRP 166
           +K TDFGL+  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y +  G  P
Sbjct: 180 IKVTDFGLAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
           F+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 238 FFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 138 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARH 194
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 195 TD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 252
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 253 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 312
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 313 SDKRITAAQALAHAYFAQYHDPDDEPV 339

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 173
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 233 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 292
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 293 SDKRITAAQALAHAYFAQYHDPDDEPV 319

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 130 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 185
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 186 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 244
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 245 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 304
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 305 SDKRITAAQALAHAYFAQYHDPDDEPV 331

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 130 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 185
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 186 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 244
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 245 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 304
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 305 SDKRITAAQALAHAYFAQYHDPDDEPV 331

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 88/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K ++ T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 114 KCAKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 169
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 170 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 228
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 229 KLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLD 288
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 289 SDKRITAAQALAHAYFAQYHDPDDEPV 315

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 120 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 175
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 176 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 234
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 235 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 294
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 295 SDKRITAAQALAHAYFAQYHDPDDEPV 321

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 120 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 175
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 176 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 234
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 235 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 294
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 295 SDKRITAAQALAHAYFAQYHDPDDEPV 321

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 173
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 174 -HTDDEMTGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 233 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 292
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 293 SDKRITAAQALAHAYFAQYHDPDDEPV 319

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 120 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 175
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 176 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 234
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 235 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 294
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 295 SDKRITAAQALAHAYFAQYHDPDDEPV 321

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 137 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARH 193
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 194 TD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 251
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 252 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 311
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 312 SDKRITAAQALAHAYFAQYHDPDDEPV 338

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 129 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 184
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 185 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 243
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 244 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 303
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 304 SDKRITAAQALAHAYFAQYHDPDDEPV 330

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 68.9 bits (167), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 130 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 185
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 186 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 244
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 245 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 304
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 305 SDKRITAAQALAHAYFAQYHDPDDEPV 331

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 68.9 bits (167), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 123 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDXELKILDFGLAR- 178
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 179 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 237
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 238 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 297
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 298 SDKRITAAQALAHAYFAQYHDPDDEPV 324

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 123 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDXELKILDFGLAR- 178
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 179 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 237
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 238 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 297
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 298 SDKRITAAQALAHAYFAQYHDPDDEPV 324

>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide Complex Length = 145

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 85/148 (57%), Gaps = 12/148 (8%)
Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           L DE++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D + +G 
Sbjct: 1   LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 59
Query: 325 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL----- 378
           +DF EF+   L   ++++ DSE+     + AF  FD D +GFI+  ELR + T L     
Sbjct: 60  IDFPEFL--NLMARKMKDTDSEE---ELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLT 114
Query: 379 KGSIDPLLEEADIDKDGRISLSEFRRLL 406
              +D ++ EAD+D DG+++  EF +++
Sbjct: 115 DEEVDEMIREADVDGDGQVNYEEFVQVM 142

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 89/183 (48%), Gaps = 29/183 (15%)
Query: 69  AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 128
           ++ + Q+ R     H  G+ HRD+KP+N L  S  +D++LK  DFG +  + P +     
Sbjct: 144 SIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNS--KDNTLKLCDFGSAKKLIPSEPSVAX 201
Query: 129 VGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK-------- 177
           + S +Y APE++    +  P  D+WSIG +   L+ G+  F  +T  D + +        
Sbjct: 202 ICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTP 261
Query: 178 ---EVLRNKPDFRRKPWPSIS-------------NSAKDFVKKLLVKDPRARLTAAQALS 221
              +++R  P +    +P++              + A D ++++L  +P  R+   +A++
Sbjct: 262 TKEQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMA 321
Query: 222 HPW 224
           HP+
Sbjct: 322 HPF 324

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 46/206 (22%)
Query: 72  VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI--------KPGK 123
           + Q LR     H   ++HRD+KP N L  S   +  LK  DFGL+  I        +P  
Sbjct: 118 IYQTLRAVKVLHGSNVIHRDLKPSNLLINS---NCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 124 K---FQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTED----- 173
           +     + V + +Y APEV+    K     DVWS G I   L   RRP +   +      
Sbjct: 175 QQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLL 233
Query: 174 ---GIF-----------------KEVLRNKPDFRRKP----WPSISNSAKDFVKKLLVKD 209
              GI                  +E +++ P +   P    +P ++    D ++++LV D
Sbjct: 234 LIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFD 293
Query: 210 PRARLTAAQALSHPWVREGGDASEIP 235
           P  R+TA +AL HP+++   D ++ P
Sbjct: 294 PAKRITAKEALEHPYLQTYHDPNDEP 319

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 115 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 170
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 171 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 229
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 230 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 289
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 290 SDKRITAAQALAHAYFAQYHDPDDEPV 316

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 129 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDXELKILDFGLAR- 184
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 185 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 243
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 244 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 303
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 304 SDKRITAAQALAHAYFAQYHDPDDEPV 330

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 124 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 179
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 180 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 238
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 239 KLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLD 298
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 299 SDKRITAAQALAHAYFAQYHDPDDEPV 325

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 173
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 233 KLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLD 292
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 293 SDKRITAAQALAHAYFAQYHDPDDEPV 319

>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide Length = 146

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 87/148 (58%), Gaps = 12/148 (8%)
Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D + +G 
Sbjct: 2   LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 60
Query: 325 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLK-- 379
           +DF EF+  T+   ++++ DSE+  +R   AF  FD D +G+I+  ELR    + G K  
Sbjct: 61  IDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNLGEKLT 115
Query: 380 -GSIDPLLEEADIDKDGRISLSEFRRLL 406
              +D ++ EADID DG+++  EF +++
Sbjct: 116 DEEVDEMIREADIDGDGQVNYEEFVQMM 143

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 114 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 169
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 170 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 228
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 229 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 288
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 289 SDKRITAAQALAHAYFAQYHDPDDEPV 315

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 116 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 171
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 172 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 230
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 231 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 290
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 291 SDKRITAAQALAHAYFAQYHDPDDEPV 317

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 68.6 bits (166), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 114 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 169
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 170 -HTDDEMAGFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 228
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 229 KLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLD 288
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 289 SDKRITAAQALAHAYFAQYHDPDDEPV 315

>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular Recognition On The Basis Of X-Ray Structures Length = 144

Iteration: 1
 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 87/148 (58%), Gaps = 12/148 (8%)
Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D + +G 
Sbjct: 1   LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 59
Query: 325 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL----- 378
           +DF EF+  T+   ++++ DSE+  +R   AF  FD D +G+I+  ELR + T L     
Sbjct: 60  IDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNLGEKLT 114
Query: 379 KGSIDPLLEEADIDKDGRISLSEFRRLL 406
              +D ++ EADID DG+++  EF +++
Sbjct: 115 DEEVDEMIREADIDGDGQVNYEEFVQMM 142

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 46/206 (22%)
Query: 72  VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI--------KPGK 123
           + Q LR     H   ++HRD+KP N L  S   +  LK  DFGL+  I        +P  
Sbjct: 118 IYQTLRAVKVLHGSNVIHRDLKPSNLLINS---NCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 124 K---FQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTED----- 173
           +     + V + +Y APEV+    K     DVWS G I   L   RRP +   +      
Sbjct: 175 QQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLL 233
Query: 174 ---GIF-----------------KEVLRNKPDFRRKP----WPSISNSAKDFVKKLLVKD 209
              GI                  +E +++ P +   P    +P ++    D ++++LV D
Sbjct: 234 LIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFD 293
Query: 210 PRARLTAAQALSHPWVREGGDASEIP 235
           P  R+TA +AL HP+++   D ++ P
Sbjct: 294 PAKRITAKEALEHPYLQTYHDPNDEP 319

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 128 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 183
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 184 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 242
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 243 KLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLD 302
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 303 SDKRITAAQALAHAYFAQYHDPDDEPV 329

>pdb|2LMT|A Chain A, Nmr Structure Of Androcam Length = 148

Iteration: 1
 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 49/146 (33%), Positives = 81/146 (55%), Gaps = 12/146 (8%)
Query: 263 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 322
           S L +E++A+ +D F   D +  G I+  E+   L + L     E+ + +++   + N +
Sbjct: 2   SELTEEQIAEFKDAFVQFDKEGTGKIATRELG-TLMRTLGQNPTEAELQDLIAEAENNNN 60
Query: 323 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLK 379
           G ++F+EF    +   Q+ E D+E+  +R   AF+ FD D DGFI+P ELR   ++ G K
Sbjct: 61  GQLNFTEFCG--IMAKQMRETDTEE-EMRE--AFKIFDRDGDGFISPAELRFVMINLGEK 115
Query: 380 GS---IDPLLEEADIDKDGRISLSEF 402
            +   ID ++ EAD D DG I+  EF
Sbjct: 116 VTDEEIDEMIREADFDGDGMINYEEF 141

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 138 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARH 194
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 195 TD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 252
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 253 KLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLD 312
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 313 SDKRITAAQALAHAYFAQYHDPDDEPV 339

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 68.6 bits (166), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 137 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARH 193
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 194 TD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 251
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 252 KLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLD 311
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 312 SDKRITAAQALAHAYFAQYHDPDDEPV 338

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 68.2 bits (165), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 114 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLAR- 169
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 170 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 228
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 229 KLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLD 288
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 289 SDKRITAAQALAHAYFAQYHDPDDEPV 315

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 46/206 (22%)
Query: 72  VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI--------KPGK 123
           + Q LR     H   ++HRD+KP N L  S   +  LK  DFGL+  I        +P  
Sbjct: 118 IYQTLRAVKVLHGSNVIHRDLKPSNLLINS---NCDLKVCDFGLARIIDESAADNSEPTG 174
Query: 124 K---FQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTED----- 173
           +     + V + +Y APEV+    K     DVWS G I   L   RRP +   +      
Sbjct: 175 QQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPIFPGRDYRHQLL 233
Query: 174 ---GIF-----------------KEVLRNKPDFRRKP----WPSISNSAKDFVKKLLVKD 209
              GI                  +E +++ P +   P    +P ++    D ++++LV D
Sbjct: 234 LIFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFD 293
Query: 210 PRARLTAAQALSHPWVREGGDASEIP 235
           P  R+TA +AL HP+++   D ++ P
Sbjct: 294 PAKRITAKEALEHPYLQTYHDPNDEP 319

>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX Length = 144

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 87/148 (58%), Gaps = 12/148 (8%)
Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D + +G 
Sbjct: 2   LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 60
Query: 325 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL----- 378
           +DF EF+  T+   ++++ DSE+  +R   AF  FD D +G+I+  ELR + T L     
Sbjct: 61  IDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNLGEKLT 115
Query: 379 KGSIDPLLEEADIDKDGRISLSEFRRLL 406
              +D ++ EADID DG+++  EF +++
Sbjct: 116 DEEVDEMIREADIDGDGQVNYEEFVQMM 143

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 90/182 (49%), Gaps = 31/182 (17%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSA 132
           Q+L+  + CH H ++HRD+KP+N L  +   + ++K  DFGL+  F  P + +   V + 
Sbjct: 111 QLLQGLSFCHSHRVLHRDLKPQNLLINT---EGAIKLADFGLARAFGVPVRTYTHEVVTL 167
Query: 133 YYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFK---------EV- 179
           +Y APE+L   +      D+WS+G I   ++  R  F   +E D +F+         EV 
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVV 227
Query: 180 ---LRNKPDFR-----------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
              + + PD++            K  P +    +  + ++L  DP  R++A  AL+HP+ 
Sbjct: 228 WPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFF 287
Query: 226 RE 227
           ++
Sbjct: 288 QD 289

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 138 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARH 194
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 195 TD--DEMXGXVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 252
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 253 KLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLD 312
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 313 SDKRITAAQALAHAYFAQYHDPDDEPV 339

>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And Potent Inhibitors For Akt: Synthesis And Sar Studies Length = 337

Iteration: 1
 Score = 68.2 bits (165), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 87/174 (50%), Gaps = 14/174 (8%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +    GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN L    
Sbjct: 107 MEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI--- 161
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILL 161
            E   ++ TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y + 
Sbjct: 162 DEQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 219
Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
            G  PF+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 220 AGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 268

>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720 Length = 280

Iteration: 1
 Score = 68.2 bits (165), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 21/181 (11%)
Query: 18  VNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 77
           VN++  M   T+P   ++        + CEG  L   + A  ++++  K    + RQ  R
Sbjct: 68  VNILLFMGYSTKPQLAIV-------TQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTAR 119
Query: 78  VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGKKFQDIVGSAYY 134
                H   ++HRD+K  N       ED+++K  DFGL+          +F+ + GS  +
Sbjct: 120 GMDYLHAKSIIHRDLKSNNIFL---HEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 176
Query: 135 VAPEVLKRK-SGP---ESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRN--KPDFR 187
           +APEV++ + S P   +SDV++ G++ Y L+ G+ P+ +    D I + V R    PD  
Sbjct: 177 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLS 236
Query: 188 R 188
           +
Sbjct: 237 K 237

>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures Length = 148

Iteration: 1
 Score = 68.2 bits (165), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 88/151 (58%), Gaps = 12/151 (7%)
Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 321
           A  L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D + 
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 322 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 378
           +G +DF EF+  T+   ++++ DSE+  +R   AF  FD D +G+I+  ELR    + G 
Sbjct: 60  NGTIDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNLGE 114
Query: 379 K---GSIDPLLEEADIDKDGRISLSEFRRLL 406
           K     +D ++ EA+ID DG+++  EF +++
Sbjct: 115 KLTDEEVDEMIREANIDGDGQVNYEEFVQMM 145

>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex With Calmodulin And Pyrophosphate Length = 146

Iteration: 1
 Score = 68.2 bits (165), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 86/146 (58%), Gaps = 12/146 (8%)
Query: 267 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD 326
           +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D + +G +D
Sbjct: 4   EEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGTID 62
Query: 327 FSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLK---G 380
           F EF+  T+   ++++ DSE+  +R   AF  FD D +G+I+  ELR    + G K    
Sbjct: 63  FPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 117
Query: 381 SIDPLLEEADIDKDGRISLSEFRRLL 406
            +D ++ EADID DG+++  EF +++
Sbjct: 118 EVDEMIREADIDGDGQVNYEEFVQMM 143

>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin V Length = 145

Iteration: 1
 Score = 68.2 bits (165), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 87/148 (58%), Gaps = 12/148 (8%)
Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D + +G 
Sbjct: 3   LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGT 61
Query: 325 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL----- 378
           +DF EF+  T+   ++++ DSE+  +R   AF  FD D +G+I+  ELR + T L     
Sbjct: 62  IDFPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNLGEKLT 116
Query: 379 KGSIDPLLEEADIDKDGRISLSEFRRLL 406
              +D ++ EADID DG+++  EF +++
Sbjct: 117 DEEVDEMIREADIDGDGQVNYEEFVQMM 144

>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The Crystal Structure Length = 142

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Composition-based stats.
 Identities = 41/146 (28%), Positives = 85/146 (58%), Gaps = 13/146 (8%)
Query: 267 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD 326
           +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D + +G +D
Sbjct: 2   EEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 327 FSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-----KG 380
           F EF+  T+   ++++ DSE+     + AF  FD D +G+I+  ELR + T L       
Sbjct: 61  FPEFL--TMMARKMKDTDSEE----IREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 114
Query: 381 SIDPLLEEADIDKDGRISLSEFRRLL 406
            +D ++ EA+ID DG+++  EF +++
Sbjct: 115 EVDEMIREANIDGDGQVNYEEFVQMM 140

>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of Anthrax Edema Factor (Ef) In Complex With Calmodulin Length = 144

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 86/146 (58%), Gaps = 12/146 (8%)
Query: 267 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD 326
           +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D + +G +D
Sbjct: 2   EEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 327 FSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLK---G 380
           F EF+  T+   ++++ DSE+  +R   AF  FD D +G+I+  ELR    + G K    
Sbjct: 61  FPEFL--TMMARKMKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVMTNLGEKLTDE 115
Query: 381 SIDPLLEEADIDKDGRISLSEFRRLL 406
            +D ++ EADID DG+++  EF +++
Sbjct: 116 EVDEMIREADIDGDGQVNYEEFVQMM 141

>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex With Indazole Derivative (Compound 18) Length = 410

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 83/176 (47%), Gaps = 18/176 (10%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG+L++ +++  D    EK A     +++      H  G +HRD+KP+N L   +     
Sbjct: 153 GGDLVN-LMSNYDV--PEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKS---GH 206
Query: 108 LKATDFGLSDFIKPGK----KFQDIVGSAYYVAPEVLKRKSGP-----ESDVWSIGVITY 158
           LK  DFG    +K  K    +    VG+  Y++PEVLK + G      E D WS+GV  Y
Sbjct: 207 LKLADFGTC--MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLY 264
Query: 159 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 214
            +L G  PF+  +  G + +++ +K          IS  AK+ +   L  D   RL
Sbjct: 265 EMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLT-DREVRL 319

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 87/207 (42%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  D+GL+  
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDYGLAR- 173
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 233 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 292
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 293 SDKRITAAQALAHAYFAQYHDPDDEPV 319

>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe Complex Structure Length = 406

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 83/176 (47%), Gaps = 18/176 (10%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG+L++ +++  D    EK A     +++      H  G +HRD+KP+N L   +     
Sbjct: 158 GGDLVN-LMSNYDV--PEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKS---GH 211
Query: 108 LKATDFGLSDFIKPGK----KFQDIVGSAYYVAPEVLKRKSGP-----ESDVWSIGVITY 158
           LK  DFG    +K  K    +    VG+  Y++PEVLK + G      E D WS+GV  Y
Sbjct: 212 LKLADFGTC--MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLY 269
Query: 159 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 214
            +L G  PF+  +  G + +++ +K          IS  AK+ +   L  D   RL
Sbjct: 270 EMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLT-DREVRL 324

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 34/206 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  
Sbjct: 147 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFGLARH 203
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 204 TD--DEMTGYVATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQL 261
Query: 177 KEVLR-----------------------NKPDFRRKPWPSISNSAK----DFVKKLLVKD 209
           ++++R                       + P   ++ +  +   A     D ++K+LV D
Sbjct: 262 QQIMRLTGTPPASVISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLD 321
Query: 210 PRARLTAAQALSHPWVREGGDASEIP 235
              R+TA++AL+HP+  +  D  + P
Sbjct: 322 TDKRITASEALAHPYFSQYHDPDDEP 347

>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4 Complexed With The Vacuolar Calcium Atpase Bca1 Peptide Length = 149

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 90/154 (58%), Gaps = 12/154 (7%)
Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 321
           A  L +E++ D ++ F   D D +G I++EE+   + + L     E  + +++  +D + 
Sbjct: 1   ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVI-RSLDQNPTEEELQDMISEVDADG 59
Query: 322 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 378
           +G ++F EF+  +L   ++++ D+E+     + AF+ FD D++G+I+  ELR   ++ G 
Sbjct: 60  NGTIEFDEFL--SLMAKKVKDTDAEE---ELKEAFKVFDKDQNGYISASELRHVMINLGE 114
Query: 379 K---GSIDPLLEEADIDKDGRISLSEFRRLLRTA 409
           K     ++ +++EAD+D DG+++  EF +++ T 
Sbjct: 115 KLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTV 148

>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil Length = 415

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/176 (30%), Positives = 83/176 (47%), Gaps = 18/176 (10%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG+L++ +++  D    EK A     +++      H  G +HRD+KP+N L   +     
Sbjct: 158 GGDLVN-LMSNYDV--PEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKS---GH 211
Query: 108 LKATDFGLSDFIKPGK----KFQDIVGSAYYVAPEVLKRKSGP-----ESDVWSIGVITY 158
           LK  DFG    +K  K    +    VG+  Y++PEVLK + G      E D WS+GV  Y
Sbjct: 212 LKLADFGTC--MKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLY 269
Query: 159 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 214
            +L G  PF+  +  G + +++ +K          IS  AK+ +   L  D   RL
Sbjct: 270 EMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLT-DREVRL 324

>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C Beta Ii Complexed With A Bisindolylmaleimide Inhibitor Length = 353

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 84/177 (47%), Gaps = 11/177 (6%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +    GG+L+  I  ++  R+ E  A     ++          G+++RD+K +N +  S 
Sbjct: 100 MEYVNGGDLMYHI--QQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDS- 156
Query: 103 KEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYIL 160
             +  +K  DFG+  + I  G   +   G+  Y+APE++  +  G   D W+ GV+ Y +
Sbjct: 157 --EGHIKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEM 214
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
           L G+ PF  + ED +F+ ++ +   + +    S+S  A    K L+ K P  RL   
Sbjct: 215 LAGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICKGLMTKHPGKRLGCG 267

>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered N- Terminal Helix Length = 350

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 87/169 (51%), Gaps = 14/169 (8%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN +     +   
Sbjct: 125 GGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI---DQQGY 179
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRP 166
           ++ TDFGL+  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y +  G  P
Sbjct: 180 IQVTDFGLAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
           F+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 238 FFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281

>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb Length = 350

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN +     +   
Sbjct: 125 GGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI---DQQGY 179
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRP 166
           +K TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y +  G  P
Sbjct: 180 IKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
           F+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 238 FFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281

>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4- Chlorophenyl)-1-(7h-Pyrrolo(2, 3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine Length = 351

Iteration: 1
 Score = 67.8 bits (164), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN +     +   
Sbjct: 126 GGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI---DQQGY 180
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRP 166
           +K TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y +  G  P
Sbjct: 181 IKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
           F+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 239 FFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 282

>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl) Amide Length = 351

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN +     +   
Sbjct: 126 GGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI---DQQGY 180
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRP 166
           +K TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y +  G  P
Sbjct: 181 IKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
           F+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 239 FFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 282

>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent Protein Kinase Reveals Unexpected Apoenzyme Conformation Length = 350

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 14/174 (8%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +    GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN L    
Sbjct: 120 MEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI--- 174
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILL 161
            +   ++ TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y + 
Sbjct: 175 DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMA 232
Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
            G  PF+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 233 AGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281

>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 14/174 (8%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +    GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN L    
Sbjct: 120 MEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI--- 174
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILL 161
            +   ++ TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y + 
Sbjct: 175 DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
            G  PF+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 233 AGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281

>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a, L173m, Q181k) With Compound 18 Length = 351

Iteration: 1
 Score = 67.4 bits (163), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN +     +   
Sbjct: 126 GGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI---DQQGY 180
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRP 166
           +K TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y +  G  P
Sbjct: 181 IKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
           F+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 239 FFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 282

>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And Regulatory (Ri{alpha}) Subunits Of Pka Length = 350

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 14/174 (8%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +    GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN L    
Sbjct: 120 MEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI--- 174
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILL 161
            +   ++ TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y + 
Sbjct: 175 DQQGYIQVTDFGFAKRVK-GRTWX-LAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
            G  PF+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 233 AGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281

>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx3203 Length = 292

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 88/181 (48%), Gaps = 21/181 (11%)
Query: 18  VNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 77
           VN++  M   T+P   ++        + CEG  L   + A  ++++  K    + RQ  R
Sbjct: 80  VNILLFMGYSTKPQLAIV-------TQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTAR 131
Query: 78  VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIKPGKKFQDIVGSAYY 134
                H   ++HRD+K  N       ED+++K  DFGL+          +F+ + GS  +
Sbjct: 132 GMDYLHAKSIIHRDLKSNNIFL---HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 188
Query: 135 VAPEVLKRK-SGP---ESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRN--KPDFR 187
           +APEV++ + S P   +SDV++ G++ Y L+ G+ P+ +    D I + V R    PD  
Sbjct: 189 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLS 248
Query: 188 R 188
           +
Sbjct: 249 K 249

>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein Kinase C Beta Ii Length = 674

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 46/172 (26%), Positives = 83/172 (48%), Gaps = 11/172 (6%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG+L+  I  ++  R+ E  A     ++          G+++RD+K +N +  S   +  
Sbjct: 426 GGDLMYHI--QQVGRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDS---EGH 480
Query: 108 LKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRR 165
           +K  DFG+  + I  G   +   G+  Y+APE++  +  G   D W+ GV+ Y +L G+ 
Sbjct: 481 IKIADFGMCKENIWDGVTTKXFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQA 540
Query: 166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
           PF  + ED +F+ ++ +   + +    S+S  A    K L+ K P  RL   
Sbjct: 541 PFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICKGLMTKHPGKRLGCG 588

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 89/211 (42%), Gaps = 36/211 (17%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + +       + Q+LR     H   ++HRD+KP N L  +      LK  DFGL+  
Sbjct: 137 KSQQLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTT---CDLKICDFGLARI 193
Query: 119 IKPGKK----FQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGR-----RPF 167
             P         + V + +Y APE++    G     D+WS+G I   +L  R     + +
Sbjct: 194 ADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHY 253
Query: 168 WDKTED--GIF----------------KEVLRNKPDFRRKPW----PSISNSAKDFVKKL 205
            D+     GI                 +  L++ P   +  W    P   + A D + ++
Sbjct: 254 LDQLNHILGILGSPSQEDLNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDRM 313
Query: 206 LVKDPRARLTAAQALSHPWVREGGDASEIPI 236
           L  +P  R+T  +AL+HP++ +  D ++ P+
Sbjct: 314 LTFNPNKRITVEEALAHPYLEQYYDPTDEPV 344

>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With H89 Protein Kinase Inhibitor N-[2- (4-Bromocinnamylamino)ethyl]-5-Isoquinoline Length = 350

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 14/174 (8%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +    GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN L    
Sbjct: 120 MEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI--- 174
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILL 161
            +   ++ TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y + 
Sbjct: 175 DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
            G  PF+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 233 AGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281

>pdb|2F7E|E Chain E, Pka Complexed With (S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6- Yl-Pyridin-3-Yloxymethyl-Etylamine Length = 351

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN L     +   
Sbjct: 126 GGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY 180
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRP 166
           ++ TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y +  G  P
Sbjct: 181 IQVTDFGFAKRVK-GRTWT-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
           F+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 239 FFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 282

>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With Azepane Derivative 8 Length = 350

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN L     +   
Sbjct: 125 GGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY 179
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRP 166
           ++ TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y +  G  P
Sbjct: 180 IQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
           F+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 238 FFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281

>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit Calpha 2 Length = 343

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN L     +   
Sbjct: 118 GGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY 172
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRP 166
           ++ TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y +  G  P
Sbjct: 173 IQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
           F+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 231 FFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 274

>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol Length = 351

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN L     +   
Sbjct: 126 GGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY 180
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRP 166
           ++ TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y +  G  P
Sbjct: 181 IQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
           F+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 239 FFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 282

>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors Length = 336

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN L     +   
Sbjct: 111 GGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY 165
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRP 166
           ++ TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y +  G  P
Sbjct: 166 IQVTDFGFAKRVK-GRTWT-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 223
Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
           F+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 224 FFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 267

>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy) Ethylamino)ethyl)amide Length = 351

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN L     +   
Sbjct: 126 GGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY 180
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRP 166
           ++ TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y +  G  P
Sbjct: 181 IQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
           F+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 239 FFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 282

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 86/194 (44%), Gaps = 36/194 (18%)
Query: 65  EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP--- 121
           E+ A + + Q+LR     H   ++HRD+KP N    +  ED  LK  DFGL+  + P   
Sbjct: 119 EEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINT--EDLVLKIGDFGLARIMDPHYS 176
Query: 122 --GKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKTEDGIFK 177
             G   + +V + +Y +P +L   +      D+W+ G I   +L G+  F    E    +
Sbjct: 177 HKGHLSEGLV-TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQ 235
Query: 178 EVLRNKPDFR----------------------RKP----WPSISNSAKDFVKKLLVKDPR 211
            +L + P                          KP     P IS  A DF++++L   P 
Sbjct: 236 LILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPM 295
Query: 212 ARLTAAQALSHPWV 225
            RLTA +ALSHP++
Sbjct: 296 DRLTAEEALSHPYM 309

>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-670 Length = 351

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN L     +   
Sbjct: 126 GGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY 180
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRP 166
           ++ TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y +  G  P
Sbjct: 181 IQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
           F+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 239 FFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 282

>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To Hydroxyfasudil Length = 351

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 14/174 (8%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +    GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN L    
Sbjct: 121 MEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI--- 175
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILL 161
            +   ++ TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y + 
Sbjct: 176 DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 233
Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
            G  PF+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 234 AGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 282

>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With The Peptide Inhibitor Pki(5-24) And Adenosine Length = 350

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 14/174 (8%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +    GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN L    
Sbjct: 120 MEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI--- 174
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILL 161
            +   ++ TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y + 
Sbjct: 175 DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
            G  PF+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 233 AGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281

>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6 Length = 149

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/152 (28%), Positives = 87/152 (57%), Gaps = 12/152 (7%)
Query: 261 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 320
           +A  L ++++++ ++ F   D D +G I+ +E+   + + L     E+ + +++  +D +
Sbjct: 1   MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVM-RSLGQNPTEAELQDMINEVDAD 59
Query: 321 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL- 378
            +G +DF EF+   L   ++++ DSE+     + AF  FD D++GFI+  ELR + T L 
Sbjct: 60  GNGTIDFPEFL--NLMARKMKDTDSEE---ELKEAFRVFDKDQNGFISAAELRHVMTNLG 114
Query: 379 ----KGSIDPLLEEADIDKDGRISLSEFRRLL 406
                  +D ++ EAD+D DG+I+  EF +++
Sbjct: 115 EKLTDEEVDEMIREADVDGDGQINYDEFVKVM 146

>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase Inhibitor Arc-1039 Length = 351

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN L     +   
Sbjct: 126 GGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY 180
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRP 166
           ++ TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y +  G  P
Sbjct: 181 IQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
           F+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 239 FFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 282

>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of Camp-Dependent Protein Kinase And Adenosine Further Defines Conformational Flexibility Length = 350

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 14/174 (8%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +    GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN L    
Sbjct: 120 MEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI--- 174
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILL 161
            +   ++ TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y + 
Sbjct: 175 DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
            G  PF+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 233 AGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281

>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent Protein Kinase With Unphosphorylated Activation Loop Length = 371

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 84/174 (48%), Gaps = 14/174 (8%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +    GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN L    
Sbjct: 141 MEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI--- 195
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILL 161
            +   ++ TDFG +  +K       + G+  Y+APE++  K   ++ D W++GV+ Y + 
Sbjct: 196 DQQGYIQVTDFGFAKRVKGAT--WTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 253
Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
            G  PF+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 254 AGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 302

>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of Camp-Dependent Protein Kinase And An Inhibitor Peptide Displays An Open Conformation Length = 350

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN L     +   
Sbjct: 125 GGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY 179
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRP 166
           ++ TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y +  G  P
Sbjct: 180 IQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
           F+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 238 FFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281

>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor Complex Length = 371

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN L     +   
Sbjct: 146 GGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY 200
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRP 166
           ++ TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y +  G  P
Sbjct: 201 IQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 258
Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
           F+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 259 FFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 302

>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With Pki-5-24 Length = 350

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN L     +   
Sbjct: 125 GGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY 179
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRP 166
           ++ TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y +  G  P
Sbjct: 180 IQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
           F+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 238 FFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281

>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit (E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24) Isoelectric Variant Ca) And Mn2+ Adenylyl Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c Length = 350

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN L     +   
Sbjct: 125 GGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY 179
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRP 166
           ++ TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y +  G  P
Sbjct: 180 IQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
           F+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 238 FFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281

>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit Of Camp- Dependent Protein Kinase Reveal Open And Closed Conformations Length = 350

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN L     +   
Sbjct: 125 GGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY 179
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRP 166
           ++ TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y +  G  P
Sbjct: 180 IQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
           F+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 238 FFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281

>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In Complex With Staurosporine Length = 350

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN L     +   
Sbjct: 125 GGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY 179
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRP 166
           ++ TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y +  G  P
Sbjct: 180 IQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
           F+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 238 FFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281

>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp- Dependent Protein Kinase Complexed With A Substrate Peptide, Adp And Detergent Length = 350

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 14/174 (8%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +    GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN L    
Sbjct: 120 MEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI--- 174
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILL 161
            +   ++ TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y + 
Sbjct: 175 DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
            G  PF+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 233 AGYPPFFADEPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281

>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure Length = 309

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 77/167 (46%), Gaps = 16/167 (9%)
Query: 65  EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 124
           E + A V    L+  A  H H ++HRD+K  N L     E   +K  DFG +  + P   
Sbjct: 114 EVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAPANX 170
Query: 125 FQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRP--FWDKTEDGIFKE 178
           F   VG+ Y++APEV+    + +   + DVWS+G IT I L  R+P  F       ++  
Sbjct: 171 F---VGTPYWMAPEVILAMDEGQYDGKVDVWSLG-ITCIELAERKPPLFNMNAMSALYHI 226
Query: 179 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
                P  +   W   S   ++FV   L K P+ R T+   L H +V
Sbjct: 227 AQNESPALQSGHW---SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 270

>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein Kinase Catalytic Subunit Length = 350

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 87/174 (50%), Gaps = 14/174 (8%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +    GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN L    
Sbjct: 120 MEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI--- 174
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILL 161
            +   ++ TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y + 
Sbjct: 175 DQQGYIQVTDFGFAKRVK-GRTWX-LXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
            G  PF+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 233 AGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281

>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein Kinase A (Pka) Length = 350

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 85/169 (50%), Gaps = 14/169 (8%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGE+   +  ++  R+ E  A     Q++      H   L++RD+KPEN +     +   
Sbjct: 125 GGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID---QQGY 179
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRP 166
           +K TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y +  G  P
Sbjct: 180 IKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
           F+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 238 FFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281

>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h- Purin-6-yl)-benzyl)-amine Length = 351

Iteration: 1
 Score = 67.0 bits (162), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 85/169 (50%), Gaps = 14/169 (8%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGE+   +  ++  R+ E  A     Q++      H   L++RD+KPEN +     +   
Sbjct: 126 GGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMID---QQGY 180
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRP 166
           +K TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y +  G  P
Sbjct: 181 IKVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
           F+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 239 FFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 282

>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation And Specifity Of A Ste20p Map3k Length = 348

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/167 (31%), Positives = 77/167 (46%), Gaps = 16/167 (9%)
Query: 65  EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK 124
           E + A V    L+  A  H H ++HRD+K  N L     E   +K  DFG +  + P   
Sbjct: 153 EVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILL---SEPGLVKLGDFGSASIMAPANX 209
Query: 125 FQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYILLCGRRP--FWDKTEDGIFKE 178
           F   VG+ Y++APEV+    + +   + DVWS+G IT I L  R+P  F       ++  
Sbjct: 210 F---VGTPYWMAPEVILAMDEGQYDGKVDVWSLG-ITCIELAERKPPLFNMNAMSALYHI 265
Query: 179 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
                P  +   W   S   ++FV   L K P+ R T+   L H +V
Sbjct: 266 AQNESPALQSGHW---SEYFRNFVDSCLQKIPQDRPTSEVLLKHRFV 309

>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam Length = 176

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/155 (32%), Positives = 82/155 (52%), Gaps = 13/155 (8%)
Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 321
           +S L +E++A+ ++ F   D D NGSIS  E+   + + L     E+ V +++  ID + 
Sbjct: 2   SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVM-RSLGLSPSEAEVNDLMNEIDVDG 60
Query: 322 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 378
           +  ++FSEF+A  L   QL+ +DSE+  L    AF+ FD + DG I+  EL+      G 
Sbjct: 61  NHQIEFSEFLA--LMSRQLKSNDSEQELLE---AFKVFDKNGDGLISAAELKHVLTSIGE 115
Query: 379 K---GSIDPLLEEADIDKDGRISLSEFRRLLRTAS 410
           K     +D +L E   D  G I++ +F  LL   S
Sbjct: 116 KLTDAEVDDMLREVS-DGSGEINIQQFAALLSKGS 149

>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii Length = 191

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 21/184 (11%)
Query: 239 SVLNNMRQFVKYSRLKQFALRALASTLDD-EELADLRDQFDAIDVDKNGSISLEEMRQAL 297
             L NM++F    +L Q A+  + S L   EE  +L   F  +D + +G +  +E+ +  
Sbjct: 7   GALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGY 66
Query: 298 AKDLPWKLK----------ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEK 347
            K + WK            E+ V  ILQ++D + +G +++SEFV   +    L   +   
Sbjct: 67  RKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRE--- 123
Query: 348 WHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSID----PLLEEADIDKDGRISLSEFR 403
              R  AAF++FD D  G IT EEL    G+    D     +L+E D + DG +   EF 
Sbjct: 124 ---RLLAAFQQFDSDGSGKITNEELGRLFGVTEVDDETWHQVLQECDKNNDGEVDFEEFV 180
Query: 404 RLLR 407
            +++
Sbjct: 181 EMMQ 184

>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase 1) Length = 294

Iteration: 1
 Score = 66.6 bits (161), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 89/184 (48%), Gaps = 19/184 (10%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG  LD +   K     E   A ++R++L+     H    +HRD+K  N L     E   
Sbjct: 101 GGSALDLL---KPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLS---EQGD 154
Query: 108 LKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITYILLCGRR 165
           +K  DFG++  +   + K    VG+ +++APEV+K+ +   ++D+WS+G+    L  G  
Sbjct: 155 VKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEP 214
Query: 166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSI----SNSAKDFVKKLLVKDPRARLTAAQALS 221
           P  D     +   + +N P       P++    S   K+FV+  L KDPR R TA + L 
Sbjct: 215 PNSDLHPMRVLFLIPKNSP-------PTLEGQHSKPFKEFVEACLNKDPRFRPTAKELLK 267
Query: 222 HPWV 225
           H ++
Sbjct: 268 HKFI 271

>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Complexed With A Peptide Inhibitor And Detergent Length = 350

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 86/174 (49%), Gaps = 14/174 (8%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +    GGE+   +  ++  R+ E  A     Q++      H   L++RD+KPEN L    
Sbjct: 120 MEYVAGGEMFSHL--RRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI--- 174
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILL 161
            +   ++ TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y + 
Sbjct: 175 DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
            G  PF+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 233 AGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281

>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent Protein Kinase With Unphosphorylated Turn Motif Length = 371

Iteration: 1
 Score = 66.6 bits (161), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 86/174 (49%), Gaps = 14/174 (8%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +    GGE+   +  ++  R+ E  A     Q++      H   L++RD+KPEN L    
Sbjct: 141 MEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI--- 195
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILL 161
            +   ++ TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y + 
Sbjct: 196 DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 253
Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
            G  PF+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 254 AGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 302

>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With A- 443654 Length = 351

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 85/169 (50%), Gaps = 14/169 (8%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGE+   +  ++  R+ E  A     Q++      H   L++RD+KPEN L     +   
Sbjct: 126 GGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY 180
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRP 166
           ++ TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y +  G  P
Sbjct: 181 IQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 238
Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
           F+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 239 FFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 282

>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp Length = 350

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN +     +   
Sbjct: 125 GGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLMI---DQQGY 179
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRP 166
           ++ TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y +  G  P
Sbjct: 180 IQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
           F+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 238 FFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281

>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2 Length = 343

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 85/169 (50%), Gaps = 14/169 (8%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGE+   +  ++  R+ E  A     Q++      H   L++RD+KPEN L     +   
Sbjct: 118 GGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY 172
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRP 166
           ++ TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y +  G  P
Sbjct: 173 IQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
           F+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 231 FFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 274

>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With Inhibitor Jnj- 7706621 Length = 351

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 86/174 (49%), Gaps = 14/174 (8%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +    GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN L    
Sbjct: 121 LEYAPGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI--- 175
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILL 161
            +   +K  DFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y + 
Sbjct: 176 DQQGYIKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 233
Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
            G  PF+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 234 AGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 282

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 86/207 (41%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK   FGL+  
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILGFGLAR- 173
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 233 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 292
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 293 SDKRITAAQALAHAYFAQYHDPDDEPV 319

>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632 Length = 350

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 85/169 (50%), Gaps = 14/169 (8%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN L     +   
Sbjct: 125 GGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY 179
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRP 166
           +K  DFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y +  G  P
Sbjct: 180 IKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
           F+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 238 FFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281

>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory Subunit Of Protein Kinase A That Represents The Inhibited State Length = 350

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 86/174 (49%), Gaps = 14/174 (8%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +    GGE+   +  ++  R+ E  A     Q++      H   L++RD+KPEN L    
Sbjct: 120 MEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI--- 174
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILL 161
            +   ++ TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y + 
Sbjct: 175 DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
            G  PF+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 233 AGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281

>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective Inhibitors In Complex With Protein Kinase A And Mutants Length = 350

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 85/169 (50%), Gaps = 14/169 (8%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGE+   +  ++  R+ E  A     Q++      H   L++RD+KPEN L     +   
Sbjct: 125 GGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY 179
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRP 166
           ++ TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y +  G  P
Sbjct: 180 IQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
           F+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 238 FFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281

>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 86/169 (50%), Gaps = 14/169 (8%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +    GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN L    
Sbjct: 120 MEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI--- 174
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILL 161
            +   ++ TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y + 
Sbjct: 175 DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKD 209
            G  PF+      I+++++  K  F     PS  S+  KD ++ LL  D
Sbjct: 233 AGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVD 276

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 83/179 (46%), Gaps = 29/179 (16%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           Q+LR     H H +VHRD+KP+N L  S+ +   +K  DFGL+           +V + +
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVVTLW 184
Query: 134 YVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTED----GIFKEV--LRNKPDF 186
           Y APEVL + S     D+WS+G I +  +  R+P +  + D    G   +V  L  + D+
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCI-FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
Query: 187 RR------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
            R                  K    I    KD + K L  +P  R++A  ALSHP+ ++
Sbjct: 244 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 302

>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077) Length = 350

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/169 (28%), Positives = 85/169 (50%), Gaps = 14/169 (8%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGE+   +  ++  R+ E  A     Q++      H   L++RD+KPEN L     +   
Sbjct: 125 GGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY 179
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRP 166
           ++ TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y +  G  P
Sbjct: 180 IQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
           F+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 238 FFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281

>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The Catalytic Subunit Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 86/174 (49%), Gaps = 14/174 (8%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +    GGE+   +  ++  R+ E  A     Q++      H   L++RD+KPEN L    
Sbjct: 120 MEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI--- 174
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILL 161
            +   ++ TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y + 
Sbjct: 175 DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
            G  PF+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 233 AGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281

>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit Of Camp- Dependent Protein Kinase In Complex With Sp20 And Amp-Pnp Length = 350

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 86/174 (49%), Gaps = 14/174 (8%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +    GGE+   +  ++  R+ E  A     Q++      H   L++RD+KPEN L    
Sbjct: 120 MEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI--- 174
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILL 161
            +   ++ TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y + 
Sbjct: 175 DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
            G  PF+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 233 AGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281

>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of Camp-Dependent Protein Kinase Length = 345

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 86/174 (49%), Gaps = 14/174 (8%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +    GGE+   +  ++  R+ E  A     Q++      H   L++RD+KPEN L    
Sbjct: 115 MEYVAGGEMFSHL--RRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI--- 169
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILL 161
            +   ++ TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y + 
Sbjct: 170 DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 227
Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
            G  PF+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 228 AGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 276

>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb Mutant Kinase Domain In Complex With Kt5720 Length = 311

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/188 (26%), Positives = 83/188 (44%), Gaps = 9/188 (4%)
Query: 54  RILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 113
           R +   +   T K A  V+    +     H +G++HRD+KP N L  +    +++K  DF
Sbjct: 104 RDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISAT---NAVKVVDF 160
Query: 114 GLSDFIKPG----KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFW 168
           G++  I        +   ++G+A Y++PE  +  S    SDV+S+G + Y +L G  PF 
Sbjct: 161 GIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT 220
Query: 169 DKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR-E 227
             +   +  + +R  P         +S      V K L K+P  R   A  +    VR  
Sbjct: 221 GDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280
Query: 228 GGDASEIP 235
            G+  E P
Sbjct: 281 NGEPPEAP 288

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 54/179 (30%), Positives = 83/179 (46%), Gaps = 29/179 (16%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           Q+LR     H H +VHRD+KP+N L  S+ +   +K  DFGL+           +V + +
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVVTLW 184
Query: 134 YVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTED----GIFKEV--LRNKPDF 186
           Y APEVL + S     D+WS+G I +  +  R+P +  + D    G   +V  L  + D+
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCI-FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
Query: 187 RR------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
            R                  K    I    KD + K L  +P  R++A  ALSHP+ ++
Sbjct: 244 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 302

>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka C-Subunit:amp-Pnp:mg2+ Complex Length = 350

Iteration: 1
 Score = 66.2 bits (160), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 87/174 (50%), Gaps = 14/174 (8%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +    GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN +    
Sbjct: 120 MEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLII--- 174
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILL 161
            +   ++ TDFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y + 
Sbjct: 175 DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMA 232
Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
            G  PF+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 233 AGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281

>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With Plx4032 Length = 289

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 87/181 (48%), Gaps = 21/181 (11%)
Query: 18  VNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 77
           VN++  M   T P   ++        + CEG  L   + A  ++++  K    + RQ  R
Sbjct: 80  VNILLFMGYSTAPQLAIV-------TQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTAR 131
Query: 78  VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIKPGKKFQDIVGSAYY 134
                H   ++HRD+K  N       ED+++K  DFGL+          +F+ + GS  +
Sbjct: 132 GMDYLHAKSIIHRDLKSNNIFL---HEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 188
Query: 135 VAPEVLKRK-SGP---ESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRN--KPDFR 187
           +APEV++ + S P   +SDV++ G++ Y L+ G+ P+ +    D I + V R    PD  
Sbjct: 189 MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLS 248
Query: 188 R 188
           +
Sbjct: 249 K 249

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 86/207 (41%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  DF L+  
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDFYLAR- 173
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 233 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 292
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 293 SDKRITAAQALAHAYFAQYHDPDDEPV 319

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 54/178 (30%), Positives = 82/178 (46%), Gaps = 29/178 (16%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           Q+LR     H H +VHRD+KP+N L  S+ +   +K  DFGL+           +V + +
Sbjct: 128 QLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVVTLW 184
Query: 134 YVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTED----GIFKEV--LRNKPDF 186
           Y APEVL + S     D+WS+G I +  +  R+P +  + D    G   +V  L  + D+
Sbjct: 185 YRAPEVLLQSSYATPVDLWSVGCI-FAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243
Query: 187 RR------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 226
            R                  K    I    KD + K L  +P  R++A  ALSHP+ +
Sbjct: 244 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301

>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The Central Helix Length = 146

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 86/153 (56%), Gaps = 14/153 (9%)
Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 321
           A  L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D + 
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 322 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 378
           +G +DF EF+  T+   ++++ + E   +R   AF  FD D +GFI+  ELR    + G 
Sbjct: 60  NGTIDFPEFL--TMMARKMKDSEEE---IRE--AFRVFDKDGNGFISAAELRHVMTNLGE 112
Query: 379 K---GSIDPLLEEADIDKDGRISLSEFRRLLRT 408
           K     +D ++ EADID DG+++  EF  ++ +
Sbjct: 113 KLTDEEVDEMIREADIDGDGQVNYEEFVTMMTS 145

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 86/207 (41%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  D GL+  
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDAGLAR- 173
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 233 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 292
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 293 SDKRITAAQALAHAYFAQYHDPDDEPV 319

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 34/206 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K    +++    +V Q+LR     H  G++HRD+KP N    +  EDS L+  DFGL+  
Sbjct: 124 KSQALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNV---AVNEDSELRILDFGLAR- 179
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPF--------- 167
            +  ++    V + +Y APE++          D+WS+G I   LL G+  F         
Sbjct: 180 -QADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQL 238
Query: 168 --------------WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK----DFVKKLLVKD 209
                           K      +  +++ P   +K   SI   A     D + ++LV D
Sbjct: 239 KRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLD 298
Query: 210 PRARLTAAQALSHPWVREGGDASEIP 235
              R++AA+AL+H +  +  D  + P
Sbjct: 299 SDQRVSAAEALAHAYFSQYHDPEDEP 324

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 36/211 (17%)
Query: 50  ELLDRILAKK-DSRYTEKDAAVV---VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
           E  D+ L K  DS   + D  +V   + Q+L+    CH   ++HRD+KP+N L     E 
Sbjct: 81  EFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGE- 139
Query: 106 SSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLC 162
             LK  DFGL+  F  P + +   V + +Y  P+VL   +      D+WS G I   L  
Sbjct: 140 --LKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELAN 197
Query: 163 GRRPFWDKTE-DGIFKEVLR--------------NKPDFRRKPW-----------PSISN 196
             RP +   + D   K + R                PD++  P            P ++ 
Sbjct: 198 AARPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNA 257
Query: 197 SAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
           + +D ++ LL  +P  R++A +AL HP+  +
Sbjct: 258 TGRDLLQNLLKCNPVQRISAEEALQHPYFSD 288

>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF Mycobacterium Tuberculosis Pknb. Length = 311

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 9/188 (4%)
Query: 54  RILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 113
           R +   +   T K A  V+    +     H +G++HRD+KP N +  +    +++K  DF
Sbjct: 104 RDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT---NAVKVMDF 160
Query: 114 GLSDFIKPG----KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFW 168
           G++  I        +   ++G+A Y++PE  +  S    SDV+S+G + Y +L G  PF 
Sbjct: 161 GIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT 220
Query: 169 DKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR-E 227
             +   +  + +R  P         +S      V K L K+P  R   A  +    VR  
Sbjct: 221 GDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280
Query: 228 GGDASEIP 235
            G+  E P
Sbjct: 281 NGEPPEAP 288

>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain Length = 402

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 88/189 (46%), Gaps = 17/189 (8%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG+L++ +++  D    EK A     +++      H  GL+HRD+KP+N L     +   
Sbjct: 159 GGDLVN-LMSNYDV--PEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLD---KHGH 212
Query: 108 LKATDFGLS-DFIKPGKKFQDI-VGSAYYVAPEVLKRKSGP-----ESDVWSIGVITYIL 160
           LK  DFG      + G    D  VG+  Y++PEVLK + G      E D WS+GV  + +
Sbjct: 213 LKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEM 272
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL---TAA 217
           L G  PF+  +  G + +++ +K          IS  AK+ +   L  D   RL      
Sbjct: 273 LVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEISKHAKNLICAFLT-DREVRLGRNGVE 331
Query: 218 QALSHPWVR 226
           +   HP+ +
Sbjct: 332 EIKQHPFFK 340

>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant (Crystal Form 1) Length = 311

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 9/188 (4%)
Query: 54  RILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 113
           R +   +   T K A  V+    +     H +G++HRD+KP N +  +    +++K  DF
Sbjct: 104 RDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT---NAVKVMDF 160
Query: 114 GLSDFIKPG----KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFW 168
           G++  I        +   ++G+A Y++PE  +  S    SDV+S+G + Y +L G  PF 
Sbjct: 161 GIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT 220
Query: 169 DKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR-E 227
             +   +  + +R  P         +S      V K L K+P  R   A  +    VR  
Sbjct: 221 GDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280
Query: 228 GGDASEIP 235
            G+  E P
Sbjct: 281 NGEPPEAP 288

>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha Complex Length = 305

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 86/200 (43%), Gaps = 16/200 (8%)
Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           +C   E+LD +  K   R+    A     Q++      H  G+VH+D+KP N L  +   
Sbjct: 91  VCGMQEMLDSVPEK---RFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTG-- 145
Query: 105 DSSLKATDFGLSDFIKP---GKKFQDIVGSAYYVAPEV---LKRKSGPESDVWSIGVITY 158
             +LK +  G+++ + P       +   GS  +  PE+   L   SG + D+WS GV  Y
Sbjct: 146 -GTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLY 204
Query: 159 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 218
            +  G  PF       +F+ + +          P +S    D +K +L  +P  R +  Q
Sbjct: 205 NITTGLYPFEGDNIYKLFENIGKGSYAIPGDCGPPLS----DLLKGMLEYEPAKRFSIRQ 260
Query: 219 ALSHPWVREGGDASEIPIDI 238
              H W R+    +E P+ I
Sbjct: 261 IRQHSWFRKKHPPAEAPVPI 280

>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant Length = 311

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 9/188 (4%)
Query: 54  RILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 113
           R +   +   T K A  V+    +     H +G++HRD+KP N +  +    +++K  DF
Sbjct: 104 RDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT---NAVKVMDF 160
Query: 114 GLSDFIKPG----KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFW 168
           G++  I        +   ++G+A Y++PE  +  S    SDV+S+G + Y +L G  PF 
Sbjct: 161 GIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT 220
Query: 169 DKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR-E 227
             +   +  + +R  P         +S      V K L K+P  R   A  +    VR  
Sbjct: 221 GDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRVH 280
Query: 228 GGDASEIP 235
            G+  E P
Sbjct: 281 NGEPPEAP 288

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 65.1 bits (157), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 86/207 (41%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  D GL+  
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDGGLAR- 173
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 233 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 292
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 293 SDKRITAAQALAHAYFAQYHDPDDEPV 319

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 65.1 bits (157), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 86/207 (41%), Gaps = 34/207 (16%)
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N    +  ED  LK  D GL+  
Sbjct: 118 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNL---AVNEDCELKILDRGLAR- 173
Query: 119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 174 -HTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 232
Query: 177 KEVLR--NKP------------------DFRRKPWPSISNS-------AKDFVKKLLVKD 209
           K +LR    P                     + P  + +N        A D ++K+LV D
Sbjct: 233 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 292
Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 293 SDKRITAAQALAHAYFAQYHDPDDEPV 319

>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 85/169 (50%), Gaps = 14/169 (8%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG++   +  ++  R++E  A     Q++      H   L++RD+KPEN L     +   
Sbjct: 125 GGDMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY 179
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRP 166
           +K  DFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y +  G  P
Sbjct: 180 IKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
           F+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 238 FFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281

>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With Y- 27632 Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 47/169 (27%), Positives = 85/169 (50%), Gaps = 14/169 (8%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG++   +  ++  R++E  A     Q++      H   L++RD+KPEN L     +   
Sbjct: 125 GGDMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI---DQQGY 179
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRP 166
           +K  DFG +  +K G+ +  + G+  Y+APE++  K   ++ D W++GV+ Y +  G  P
Sbjct: 180 IKVADFGFAKRVK-GRTWX-LCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPP 237
Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
           F+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 238 FFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281

>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit Of Camp- Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 14/174 (8%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +    GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN L    
Sbjct: 120 MEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI--- 174
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILL 161
            +   ++ TDFG +  +K G+ +  + G+  Y+AP ++  K   ++ D W++GV+ Y + 
Sbjct: 175 DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMA 232
Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
            G  PF+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 233 AGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 64.7 bits (156), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 88/201 (43%), Gaps = 34/201 (16%)
Query: 64  TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 123
           +++    +V Q+LR     H  G++HRD+KP N    +  EDS L+  DFGL+   +  +
Sbjct: 129 SDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNV---AVNEDSELRILDFGLAR--QADE 183
Query: 124 KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPF-------------- 167
           +    V + +Y APE++          D+WS+G I   LL G+  F              
Sbjct: 184 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIME 243
Query: 168 ---------WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK----DFVKKLLVKDPRARL 214
                      K      +  +++ P   +K   SI   A     D + ++LV D   R+
Sbjct: 244 VVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRV 303
Query: 215 TAAQALSHPWVREGGDASEIP 235
           +AA+AL+H +  +  D  + P
Sbjct: 304 SAAEALAHAYFSQYHDPEDEP 324

>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax Cdpk, Pvx_11610 Length = 196

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/188 (27%), Positives = 88/188 (46%), Gaps = 28/188 (14%)
Query: 235 PIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMR 294
            IDI VL N + +    R ++ A+  +A   +D ++  L+  F  +D +  G+I+  ++R
Sbjct: 19  KIDIHVLENFKNYALMLRFQKLAMTIIAQQSNDYDVQKLKAAFLHLDEEGKGNITKLQLR 78
Query: 295 QALAKD---LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 351
           + L +    LP          +L  ID +  G +D++EF+AA +   QL    S+K    
Sbjct: 79  KGLERSGLMLPPNFDL-----LLDQIDSDGSGNIDYTEFLAAAIDRRQL----SKKL--- 126
Query: 352 SQAAFEKFDIDRDGFITPEELRMHTGLKGS------------IDPLLEEADIDKDGRISL 399
              AF  FD+D DG IT  EL  H    G+            +  ++ E D + DG+I  
Sbjct: 127 IYCAFRVFDVDNDGEITTAEL-AHVLFNGNKRGNITERDVNQVKKMIREVDKNGDGKIDF 185
Query: 400 SEFRRLLR 407
            EF  +++
Sbjct: 186 YEFSEMMK 193

>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With Ucb1353770 And Amppnp Length = 304

Iteration: 1
 Score = 64.7 bits (156), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 94/193 (48%), Gaps = 16/193 (8%)
Query: 49  GELLDRILAKKDSRYTEK---DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
           G  LD++L KK  R  E+     ++ V + L    E   H ++HRD+KP N L  S  E 
Sbjct: 107 GGSLDQVL-KKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGE- 162
Query: 106 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGR 164
             +K  DFG+S  +         VG+  Y++PE L+      +SD+WS+G+    +  GR
Sbjct: 163 --IKLCDFGVSGQLIDSMA-NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 219
Query: 165 RPFWDKTED-GIFK--EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 221
            P    +    IF+  + + N+P   + P    S   +DFV K L+K+P  R    Q + 
Sbjct: 220 YPIGSGSGSMAIFELLDYIVNEPP-PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMV 278
Query: 222 HPWVREGGDASEI 234
           H +++   DA E+
Sbjct: 279 HAFIKR-SDAEEV 290

>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With Cyclosporin A And Human Cyclophilin Length = 170

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 21/167 (12%)
Query: 261 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 320
           + S  D +E+  L  +F  +D+D +GS+S+EE        LP   +   V  ++   D +
Sbjct: 11  MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMS-----LPELQQNPLVQRVIDIFDTD 65
Query: 321 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE----LRMHT 376
            +G VDF EF+     V Q      ++  LR   AF  +D+D+DG+I+  E    L+M  
Sbjct: 66  GNGEVDFKEFIEG---VSQFSVKGDKEQKLR--FAFRIYDMDKDGYISNGELFQVLKMMV 120
Query: 377 G-------LKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISSRNV 416
           G       L+  +D  +  AD D DGRIS  EF  ++    I  + V
Sbjct: 121 GNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHKKMV 167

>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin B, Fkbp12 And The Immunosuppressant Drug Fk506 (tacrolimus) Length = 169

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 21/167 (12%)
Query: 261 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 320
           + S  D +E+  L  +F  +D+D +GS+S+EE        LP   +   V  ++   D +
Sbjct: 10  MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMS-----LPELQQNPLVQRVIDIFDTD 64
Query: 321 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE----LRMHT 376
            +G VDF EF+     V Q      ++  LR   AF  +D+D+DG+I+  E    L+M  
Sbjct: 65  GNGEVDFKEFIEG---VSQFSVKGDKEQKLR--FAFRIYDMDKDGYISNGELFQVLKMMV 119
Query: 377 G-------LKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISSRNV 416
           G       L+  +D  +  AD D DGRIS  EF  ++    I  + V
Sbjct: 120 GNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHKKMV 166

>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase Mst4 In Complex With An Quinazolin Length = 301

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 88/185 (47%), Gaps = 21/185 (11%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG  LD + A     + E   A +++++L+     H    +HRD+K  N L     E   
Sbjct: 105 GGSALDLLRA---GPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLS---EQGD 158
Query: 108 LKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRR 165
           +K  DFG++  +   + K    VG+ +++APEV+++ +   ++D+WS+G+    L  G  
Sbjct: 159 VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEP 218
Query: 166 PFWDKTEDGIFKEVLRNKP-----DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           P  D     +   + +N P     DF +        S K+F+   L KDP  R TA + L
Sbjct: 219 PNSDMHPMRVLFLIPKNNPPTLVGDFTK--------SFKEFIDACLNKDPSFRPTAKELL 270
Query: 221 SHPWV 225
            H ++
Sbjct: 271 KHKFI 275

>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta Length = 294

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 8/163 (4%)
Query: 65  EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK- 123
           E   A ++R++L+     H    +HRD+K  N L     E   +K  DFG++  +   + 
Sbjct: 123 ETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQI 179
Query: 124 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 182
           K    VG+ +++APEV+K+ +   ++D+WS+G+    L  G  P  +     +   + +N
Sbjct: 180 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN 239
Query: 183 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
            P      +   S   K+FV+  L K+P  R TA + L H ++
Sbjct: 240 NPPTLEGNY---SKPLKEFVEACLNKEPSFRPTAKELLKHKFI 279

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 84/199 (42%), Gaps = 35/199 (17%)
Query: 70  VVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD 127
           V + Q++R     HL    + HRD+KP N L   A  D +LK  DFG +  + P +    
Sbjct: 133 VFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEA--DGTLKLCDFGSAKKLSPSEPNVA 190
Query: 128 IVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR---- 181
            + S YY APE++   +      D+WS+G I   ++ G   F      G   E++R    
Sbjct: 191 YICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGC 250
Query: 182 ----------------NKPDFRRKPWPSI--------SNSAKDFVKKLLVKDPRARLTAA 217
                           +  + +  PW ++        +  A D +  LL   P  R+   
Sbjct: 251 PSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPY 310
Query: 218 QALSHPWVREGGD-ASEIP 235
           +AL HP+  E  D A+++P
Sbjct: 311 EALCHPYFDELHDPATKLP 329

>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces Cerevisiae Length = 146

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 13/151 (8%)
Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 321
           +S L +E++A+ ++ F   D D NGSIS  E+   + + L     E+ V +++  ID + 
Sbjct: 1   SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVM-RSLGLSPSEAEVNDLMNEIDVDG 59
Query: 322 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 378
           +  ++FSEF+A  L   QL+ +DSE+  L    AF+ FD + DG I+  EL+      G 
Sbjct: 60  NHQIEFSEFLA--LMSRQLKSNDSEQELLE---AFKVFDKNGDGLISAAELKHVLTSIGE 114
Query: 379 K---GSIDPLLEEADIDKDGRISLSEFRRLL 406
           K     +D +L E   D  G I++ +F  LL
Sbjct: 115 KLTDAEVDDMLREVS-DGSGEINIQQFAALL 144

>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 7 Activated Mutant (S287d, T291d) Length = 318

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/149 (31%), Positives = 71/149 (47%), Gaps = 11/149 (7%)
Query: 85  HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL---- 140
           HG++HRD+KP N L     E   +K  DFG+S  +   K      G A Y+APE +    
Sbjct: 144 HGVIHRDVKPSNILL---DERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPD 200
Query: 141 --KRKSGPESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDFRRKPWPSISNS 197
             K      +DVWS+G+    L  G+ P+ + KT+  +  +VL+ +P          S  
Sbjct: 201 PTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLLPGHM-GFSGD 259
Query: 198 AKDFVKKLLVKDPRARLTAAQALSHPWVR 226
            + FVK  L KD R R    + L H +++
Sbjct: 260 FQSFVKDCLTKDHRKRPKYNKLLEHSFIK 288

>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based Allosteric Inhibitor Xl518 (Gdc-0973), Or Related Analogs. Length = 301

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 96/192 (50%), Gaps = 18/192 (9%)
Query: 49  GELLDRILAKKDSRYTEK---DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
           G  LD++L KK  R  E+     ++ V + L    E   H ++HRD+KP N L  S  E 
Sbjct: 91  GGSLDQVL-KKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGE- 146
Query: 106 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGR 164
             +K  DFG+S  +   +   + VG+  Y++PE L+      +SD+WS+G+    +  GR
Sbjct: 147 --IKLCDFGVSGQLID-EMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 203
Query: 165 RPFWDKTEDGIFK--EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
            P   +    IF+  + + N+P   + P    S   +DFV K L+K+P  R    Q + H
Sbjct: 204 YP---RPPMAIFELLDYIVNEPP-PKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVH 259
Query: 223 PWVREGGDASEI 234
            +++   DA E+
Sbjct: 260 AFIKR-SDAEEV 270

>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium Tuberculosis Length = 299

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 8/178 (4%)
Query: 54  RILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF 113
           R +   +   T K A  V+    +     H +G++HRD+KP N +  +    +++K  DF
Sbjct: 121 RDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISAT---NAVKVMDF 177
Query: 114 GLSDFIKPG----KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFW 168
           G++  I        +   ++G+A Y++PE  +  S    SDV+S+G + Y +L G  PF 
Sbjct: 178 GIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFT 237
Query: 169 DKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 226
             +   +  + +R  P         +S      V K L K+P  R   A  +    VR
Sbjct: 238 GDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVR 295

>pdb|3A7F|A Chain A, Human Mst3 Kinase Length = 303

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 8/163 (4%)
Query: 65  EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK- 123
           E   A ++R++L+     H    +HRD+K  N L     E   +K  DFG++  +   + 
Sbjct: 118 ETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQI 174
Query: 124 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 182
           K    VG+ +++APEV+K+ +   ++D+WS+G+    L  G  P  +     +   + +N
Sbjct: 175 KRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN 234
Query: 183 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
            P      +   S   K+FV+  L K+P  R TA + L H ++
Sbjct: 235 NPPTLEGNY---SKPLKEFVEACLNKEPSFRPTAKELLKHKFI 274

>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) Length = 304

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 8/163 (4%)
Query: 65  EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK- 123
           E   A ++R++L+     H    +HRD+K  N L     E   +K  DFG++  +   + 
Sbjct: 103 ETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQI 159
Query: 124 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 182
           K    VG+ +++APEV+K+ +   ++D+WS+G+    L  G  P  +     +   + +N
Sbjct: 160 KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN 219
Query: 183 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
            P      +   S   K+FV+  L K+P  R TA + L H ++
Sbjct: 220 NPPTLEGNY---SKPLKEFVEACLNKEPSFRPTAKELLKHKFI 259

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/232 (26%), Positives = 88/232 (37%), Gaps = 70/232 (30%)
Query: 71  VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-------------- 116
           VV Q+++V    H  GL+HRDMKP N L  +   +  +K  DFGLS              
Sbjct: 114 VVYQLIKVIKYLHSGGLLHRDMKPSNILLNA---ECHVKVADFGLSRSFVNIRRVTNNIP 170
Query: 117 --------DFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRP 166
                   +F        D V + +Y APE+L    K     D+WS+G I   +LCG+  
Sbjct: 171 LSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPI 230
Query: 167 F-----------------WDKTED---------GIFKEVLRNKPDFRR------------ 188
           F                 +   ED             E L+ K + R+            
Sbjct: 231 FPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKN 290
Query: 189 -----KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 235
                 P    +  A D + KLL  +P  R++A  AL HP+V    + +E P
Sbjct: 291 LLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPNEEP 342

>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus SerineTHREONINE KINASE Pknb Length = 294

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 8/159 (5%)
Query: 67  DAAV-VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF 125
           D A+    Q+L      H   +VHRD+KP+N L  S K   +LK  DFG++  +      
Sbjct: 111 DTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNK---TLKIFDFGIAKALSETSLT 167
Query: 126 QD--IVGSAYYVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPFWDKTEDGI-FKEVLR 181
           Q   ++G+  Y +PE  K ++  E +D++SIG++ Y +L G  PF  +T   I  K +  
Sbjct: 168 QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQD 227
Query: 182 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           + P+        I  S  + + +   KD   R    Q +
Sbjct: 228 SVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEM 266

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 92/208 (44%), Gaps = 36/208 (17%)
Query: 50  ELLDRILAKK-DSRYTEKDAAVV---VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
           E  D+ L K  DS   + D  +V   + Q+L+    CH   ++HRD+KP+N L     E 
Sbjct: 81  EFCDQDLKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGE- 139
Query: 106 SSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLC 162
             LK  +FGL+  F  P + +   V + +Y  P+VL   +      D+WS G I   L  
Sbjct: 140 --LKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELAN 197
Query: 163 GRRPFWDKTE-DGIFKEVLR--------------NKPDFRRKPW-----------PSISN 196
             RP +   + D   K + R                PD++  P            P ++ 
Sbjct: 198 AGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNA 257
Query: 197 SAKDFVKKLLVKDPRARLTAAQALSHPW 224
           + +D ++ LL  +P  R++A +AL HP+
Sbjct: 258 TGRDLLQNLLKCNPVQRISAEEALQHPY 285

>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3, Stk24) In Complex With Staurosporine Length = 304

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 8/163 (4%)
Query: 65  EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK- 123
           E   A ++R++L+     H    +HRD+K  N L     E   +K  DFG++  +   + 
Sbjct: 103 ETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS---EHGEVKLADFGVAGQLTDTQI 159
Query: 124 KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN 182
           K    VG+ +++APEV+K+ +   ++D+WS+G+    L  G  P  +     +   + +N
Sbjct: 160 KRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKN 219
Query: 183 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
            P      +   S   K+FV+  L K+P  R TA + L H ++
Sbjct: 220 NPPTLEGNY---SKPLKEFVEACLNKEPSFRPTAKELLKHKFI 259

>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of Camp-Dependent Protein Kinase Length = 350

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 86/174 (49%), Gaps = 14/174 (8%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +    GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN L    
Sbjct: 120 MEYVAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLI--- 174
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILL 161
            +   ++ TDFG +  +K G+ +  + G+   +APE++  K   ++ D W++GV+ Y + 
Sbjct: 175 DQQGYIQVTDFGFAKRVK-GRTWX-LCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARL 214
            G  PF+      I+++++  K  F     PS  S+  KD ++ LL  D   R 
Sbjct: 233 AGYPPFFADQPIQIYEKIVSGKVRF-----PSHFSSDLKDLLRNLLQVDLTKRF 281

>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In Complex With Ch4987655 And Mgamp-Pnp Length = 307

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 65/209 (31%), Positives = 101/209 (48%), Gaps = 27/209 (12%)
Query: 43  IRLC----EGGELLDRILAKKDSRYTEK---DAAVVVRQMLRVAAECHLHGLVHRDMKPE 95
           I +C    +GG L D++L KK  R  E+     ++ V + L    E   H ++HRD+KP 
Sbjct: 79  ISICMEHMDGGSL-DQVL-KKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPS 134
Query: 96  NFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIG 154
           N L  S  E   +K  DFG+S  +         VG+  Y++PE L+      +SD+WS+G
Sbjct: 135 NILVNSRGE---IKLCDFGVSGQLIDSMA-NSFVGTRSYMSPERLQGTHYSVQSDIWSMG 190
Query: 155 VITYILLCGRRPFW--DKTED-----GIFK--EVLRNKPDFRRKPWPSISNSAKDFVKKL 205
           +    +  GR P    D  ED      IF+  + + N+P   + P    S   +DFV K 
Sbjct: 191 LSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDYIVNEPP-PKLPSGVFSLEFQDFVNKC 249
Query: 206 LVKDPRARLTAAQALSHPWVREGGDASEI 234
           L+K+P  R    Q + H +++   DA E+
Sbjct: 250 LIKNPAERADLKQLMVHAFIKR-SDAEEV 277

>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue Length = 348

Iteration: 1
 Score = 63.2 bits (152), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 48/176 (27%), Positives = 81/176 (46%), Gaps = 24/176 (13%)
Query: 70  VVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI 128
            +++ +L   +  H    + HRD+KP N L     ++  +K +DFG S+++   KK +  
Sbjct: 155 CIIKSVLNSFSYIHNEKNICHRDVKPSNIL---MDKNGRVKLSDFGESEYM-VDKKIKGS 210
Query: 129 VGSAYYVAPEVLKRKS---GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK-- 183
            G+  ++ PE    +S   G + D+WS+G+  Y++     PF  K         +R K  
Sbjct: 211 RGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNI 270
Query: 184 -----------PDFRRKPWPS---ISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
                      P   +K   S   +SN   DF+K  L K+P  R+T+  AL H W+
Sbjct: 271 EYPLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWL 326

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 87/201 (43%), Gaps = 34/201 (16%)
Query: 64  TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK 123
           +++    +V Q+LR     H  G++HRD+KP N    +  ED  L+  DFGL+   +  +
Sbjct: 121 SDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNV---AVNEDCELRILDFGLAR--QADE 175
Query: 124 KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPF-------------- 167
           +    V + +Y APE++          D+WS+G I   LL G+  F              
Sbjct: 176 EMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIME 235
Query: 168 ---------WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAK----DFVKKLLVKDPRARL 214
                      K      +  +++ P   +K   SI   A     D + ++LV D   R+
Sbjct: 236 VVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRV 295
Query: 215 TAAQALSHPWVREGGDASEIP 235
           +AA+AL+H +  +  D  + P
Sbjct: 296 SAAEALAHAYFSQYHDPEDEP 316

>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In Complex With The Bisindoylmaleide Inhibitor Bim Viii Length = 412

Iteration: 1
 Score = 62.8 bits (151), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 88/191 (46%), Gaps = 19/191 (9%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG+LL  +L+K   R   + A   + +++      H  G VHRD+KP+N L         
Sbjct: 145 GGDLL-TLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRC---GH 200
Query: 108 LKATDFGLSDFIKPGKKFQDIV--GSAYYVAPEVLK--------RKSGPESDVWSIGVIT 157
           ++  DFG    ++     + +V  G+  Y++PE+L+           GPE D W++GV  
Sbjct: 201 IRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFA 260
Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW-PSISNSAKDFVKKLLVKDPRARL-- 214
           Y +  G+ PF+  +    + +++  K           +   A+DF+++LL   P  RL  
Sbjct: 261 YEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLCP-PETRLGR 319
Query: 215 -TAAQALSHPW 224
             A    +HP+
Sbjct: 320 GGAGDFRTHPF 330

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score = 62.8 bits (151), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 53/166 (31%), Positives = 78/166 (46%), Gaps = 32/166 (19%)
Query: 83  HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVL- 140
           H H ++HRD+KP N L     E+  LK  DFGL+  F  P + +   V + +Y APE+L 
Sbjct: 129 HQHWILHRDLKPNNLLL---DENGVLKLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLF 185
Query: 141 -KRKSGPESDVWSIGVITYILLCGRRPFWDKTED-----GIFKEV----------LRNKP 184
             R  G   D+W++G I   LL  R PF     D      IF+ +          + + P
Sbjct: 186 GARMYGVGVDMWAVGCILAELLL-RVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLP 244
Query: 185 DFRR-KPWPSI---------SNSAKDFVKKLLVKDPRARLTAAQAL 220
           D+   K +P I          +   D ++ L + +P AR+TA QAL
Sbjct: 245 DYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQAL 290

>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex With Calmodulin In The Presence Of 10 Millimolar Exogenously Added Calcium Chloride Length = 149

Iteration: 1
 Score = 62.4 bits (150), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 81/147 (55%), Gaps = 12/147 (8%)
Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 321
           A  L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + + +  +D + 
Sbjct: 2   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELG-TVXRSLGQNPTEAELQDXINEVDADG 60
Query: 322 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 378
           +G +DF EF+  T    + ++ DSE+  +R   AF  FD D +G+I+  ELR + T L  
Sbjct: 61  NGTIDFPEFL--TXXARKXKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVXTNLGE 115
Query: 379 ---KGSIDPLLEEADIDKDGRISLSEF 402
                 +D  + EADID DG+++  EF
Sbjct: 116 KLTDEEVDQXIREADIDGDGQVNYEEF 142

>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase Domain Complexed With Amp-Pnp Length = 327

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 69/147 (46%), Gaps = 12/147 (8%)
Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKSG 145
           ++HRD+KP N L   +    ++K  DFG+S   +    K +D  G   Y+APE +   + 
Sbjct: 147 IIHRDIKPSNILLDRS---GNIKLCDFGISGQLVDSIAKTRD-AGCRPYMAPERIDPSAS 202
Query: 146 PE-----SDVWSIGVITYILLCGRRPF--WDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 198
            +     SDVWS+G+  Y L  GR P+  W+   D + + V  + P          S S 
Sbjct: 203 RQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSF 262
Query: 199 KDFVKKLLVKDPRARLTAAQALSHPWV 225
            +FV   L KD   R    + L HP++
Sbjct: 263 INFVNLCLTKDESKRPKYKELLKHPFI 289

>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase Peptide Bound To Calmodulin Length = 148

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 81/147 (55%), Gaps = 12/147 (8%)
Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 321
           A  L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + + +  +D + 
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELG-TVXRSLGQNPTEAELQDXINEVDADG 59
Query: 322 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 378
           +G +DF EF+  T    + ++ DSE+  +R   AF  FD D +G+I+  ELR + T L  
Sbjct: 60  NGTIDFPEFL--TXXARKXKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVXTNLGE 114
Query: 379 ---KGSIDPLLEEADIDKDGRISLSEF 402
                 +D  + EADID DG+++  EF
Sbjct: 115 KLTDEEVDEXIREADIDGDGQVNYEEF 141

>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With Pvivit Peptide Length = 156

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 21/163 (12%)
Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           +D +E+  L  +F  +D+D +GS+S+EE        LP   +   V  ++   D + +G 
Sbjct: 1   MDADEIKRLGKRFKKLDLDNSGSLSVEEFMS-----LPELQQNPLVQRVIDIFDTDGNGE 55
Query: 325 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE----LRMHTG--- 377
           VDF EF+     V Q      ++  LR   AF  +D+D+DG+I+  E    L+M  G   
Sbjct: 56  VDFKEFIEG---VSQFSVKGDKEQKLR--FAFRIYDMDKDGYISNGELFQVLKMMVGNNL 110
Query: 378 ----LKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISSRNV 416
               L+  +D  +  AD D DGRIS  EF  ++    I  + V
Sbjct: 111 KDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHKKMV 153

>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase 32a (Yank1) Length = 384

Iteration: 1
 Score = 62.4 bits (150), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/178 (26%), Positives = 83/178 (46%), Gaps = 12/178 (6%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + L  GG+L  R   +++  + E+   + + +++          ++HRDMKP+N L    
Sbjct: 94  VDLLLGGDL--RYHLQQNVHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLD-- 149
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGP----ESDVWSIGVITY 158
            E   +  TDF ++  +    +   + G+  Y+APE+   + G       D WS+GV  Y
Sbjct: 150 -EHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAY 208
Query: 159 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRARLT 215
            LL GRRP+  ++     KE++    +     +PS  S      +KKLL  +P  R +
Sbjct: 209 ELLRGRRPYHIRSSTSS-KEIVHTF-ETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFS 264

>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1) Length = 350

Iteration: 1
 Score = 62.0 bits (149), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 85/186 (45%), Gaps = 16/186 (8%)
Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
           CEGG+L  RI A+K   + E        Q+       H   ++HRD+K +N       +D
Sbjct: 105 CEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL---TKD 161
Query: 106 SSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCG 163
            +++  DFG++  +    +  +  +G+ YY++PE+ + K    +SD+W++G + Y L   
Sbjct: 162 GTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTL 221
Query: 164 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI----SNSAKDFVKKLLVKDPRARLTAAQA 219
           +  F   +   +  +++          +P +    S   +  V +L  ++PR R +    
Sbjct: 222 KHAFEAGSMKNLVLKIISGS-------FPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSI 274
Query: 220 LSHPWV 225
           L   ++
Sbjct: 275 LEKGFI 280

>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.9a Length = 543

Iteration: 1
 Score = 62.0 bits (149), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 81/155 (52%), Gaps = 7/155 (4%)
Query: 63  YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 122
           + E  A     Q++      H   +++RD+KPEN L     +D +++ +D GL+  +K G
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAG 342
Query: 123 K-KFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 180
           + K +   G+  ++APE+L  +    S D +++GV  Y ++  R PF  + E    KE L
Sbjct: 343 QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE-L 401
Query: 181 RNKPDFRRKPWP-SISNSAKDFVKKLLVKDPRARL 214
           + +   +   +P   S ++KDF + LL KDP  RL
Sbjct: 402 KQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRL 436

>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1 Bound To Atp And Magnesium Chloride At 2.7a Length = 543

Iteration: 1
 Score = 62.0 bits (149), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 81/155 (52%), Gaps = 7/155 (4%)
Query: 63  YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 122
           + E  A     Q++      H   +++RD+KPEN L     +D +++ +D GL+  +K G
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAG 342
Query: 123 K-KFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 180
           + K +   G+  ++APE+L  +    S D +++GV  Y ++  R PF  + E    KE L
Sbjct: 343 QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE-L 401
Query: 181 RNKPDFRRKPWP-SISNSAKDFVKKLLVKDPRARL 214
           + +   +   +P   S ++KDF + LL KDP  RL
Sbjct: 402 KQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRL 436

>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution Length = 543

Iteration: 1
 Score = 62.0 bits (149), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 81/155 (52%), Gaps = 7/155 (4%)
Query: 63  YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 122
           + E  A     Q++      H   +++RD+KPEN L     +D +++ +D GL+  +K G
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAG 342
Query: 123 K-KFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 180
           + K +   G+  ++APE+L  +    S D +++GV  Y ++  R PF  + E    KE L
Sbjct: 343 QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE-L 401
Query: 181 RNKPDFRRKPWP-SISNSAKDFVKKLLVKDPRARL 214
           + +   +   +P   S ++KDF + LL KDP  RL
Sbjct: 402 KQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRL 436

>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C DOUBLE MUTANT Complexed With Adp And Mg Length = 543

Iteration: 1
 Score = 62.0 bits (149), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 81/155 (52%), Gaps = 7/155 (4%)
Query: 63  YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 122
           + E  A     Q++      H   +++RD+KPEN L     +D +++ +D GL+  +K G
Sbjct: 286 FQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLL---DDDGNVRISDLGLAVELKAG 342
Query: 123 K-KFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYILLCGRRPFWDKTEDGIFKEVL 180
           + K +   G+  ++APE+L  +    S D +++GV  Y ++  R PF  + E    KE L
Sbjct: 343 QTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKE-L 401
Query: 181 RNKPDFRRKPWP-SISNSAKDFVKKLLVKDPRARL 214
           + +   +   +P   S ++KDF + LL KDP  RL
Sbjct: 402 KQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRL 436

>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric KinaseRNASE Ire1 Length = 448

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 23/181 (12%)
Query: 65  EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF----------KSAKEDSSLKATDFG 114
           E +   ++RQ+    A  H   ++HRD+KP+N L           ++  E+  +  +DFG
Sbjct: 132 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 191
Query: 115 LSDFIKPGK-----KFQDIVGSAYYVAPEVL----KRKSGPESDVWSIG-VITYILLCGR 164
           L   +  G+        +  G++ + APE+L    KR+     D++S+G V  YIL  G+
Sbjct: 192 LCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGK 251
Query: 165 RPFWDKT--EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
            PF DK   E  I + +  +  + +     S+   A D + +++  DP  R TA + L H
Sbjct: 252 HPFGDKYSRESNIIRGIF-SLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 310
Query: 223 P 223
           P
Sbjct: 311 P 311

>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The Kinase-Ribonuclease Domain Of Ire1 Length = 448

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 86/181 (47%), Gaps = 23/181 (12%)
Query: 65  EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF----------KSAKEDSSLKATDFG 114
           E +   ++RQ+    A  H   ++HRD+KP+N L           ++  E+  +  +DFG
Sbjct: 132 EYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFG 191
Query: 115 LSDFIKPGK-----KFQDIVGSAYYVAPEVL----KRKSGPESDVWSIG-VITYILLCGR 164
           L   +  G+        +  G++ + APE+L    KR+     D++S+G V  YIL  G+
Sbjct: 192 LCKKLDSGQXXFRXNLNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGK 251
Query: 165 RPFWDKT--EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
            PF DK   E  I + +  +  + +     S+   A D + +++  DP  R TA + L H
Sbjct: 252 HPFGDKYSRESNIIRGIF-SLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRH 310
Query: 223 P 223
           P
Sbjct: 311 P 311

>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp) From Human Epithelial Cells Length = 148

Iteration: 1
 Score = 61.6 bits (148), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 82/151 (54%), Gaps = 12/151 (7%)
Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 321
           A  L +E++ + ++ F   D D +G I+  E+   + + L     E+ + +++  ID + 
Sbjct: 1   ADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVM-RSLGQNPTEAELRDMMSEIDRDG 59
Query: 322 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 378
           +G VDF EF+   +   ++++ D+E+  +R   AF  FD D +GF++  ELR      G 
Sbjct: 60  NGTVDFPEFLG--MMARKMKDTDNEE-EIRE--AFRVFDKDGNGFVSAAELRHVMTRLGE 114
Query: 379 KGS---IDPLLEEADIDKDGRISLSEFRRLL 406
           K S   +D ++  AD D DG+++  EF R+L
Sbjct: 115 KLSDEEVDEMIRAADTDGDGQVNYEEFVRVL 145

>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The C-Terminal Fragment Of Spindle Pole Body Protein Spc110 Length = 147

Iteration: 1
 Score = 61.2 bits (147), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 48/152 (31%), Positives = 81/152 (53%), Gaps = 13/152 (8%)
Query: 261 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 320
           ++  L +E++A+ ++ F   D D +GSIS  E+   + + L     E+ V +++  ID +
Sbjct: 1   MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVM-RSLGLSPSEAEVADLMNEIDVD 59
Query: 321 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTG 377
            +  ++FSEF+A  L   QL+ +DSE+  L    AF+ FD + DG I+  EL+      G
Sbjct: 60  GNHAIEFSEFLA--LMSRQLKCNDSEQELLE---AFKVFDKNGDGLISAAELKHVLTSIG 114
Query: 378 LK---GSIDPLLEEADIDKDGRISLSEFRRLL 406
            K     +D +L E   D  G I++ +F  LL
Sbjct: 115 EKLTDAEVDEMLREVS-DGSGEINIKQFAALL 145

>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79 Peptide Length = 155

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 78/162 (48%), Gaps = 21/162 (12%)
Query: 266 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 325
           D +E+  L  +F  +D+D +GS+S+EE        LP   +   V  ++   D + +G V
Sbjct: 1   DADEIKRLGKRFKKLDLDNSGSLSVEEFMS-----LPELQQNPLVQRVIDIFDTDGNGEV 55
Query: 326 DFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE----LRMHTG---- 377
           DF EF+     V Q      ++  LR   AF  +D+D+DG+I+  E    L+M  G    
Sbjct: 56  DFKEFIEG---VSQFSVKGDKEQKLR--FAFRIYDMDKDGYISNGELFQVLKMMVGNNLK 110
Query: 378 ---LKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISSRNV 416
              L+  +D  +  AD D DGRIS  EF  ++    I  + V
Sbjct: 111 DTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHKKMV 152

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 83/203 (40%), Gaps = 33/203 (16%)
Query: 56  LAKKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           +A+  SR  +    + V+    Q+ R  A  H  G+ HRD+KP+N L     + + LK  
Sbjct: 121 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLC 178
Query: 112 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWD 169
           DFG +  +  G+     + S YY APE++   +   S  DVWS G +   LL G+  F  
Sbjct: 179 DFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 238
Query: 170 KTEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKK 204
            +      E+++                      P  +  PW     P     A     +
Sbjct: 239 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 298
Query: 205 LLVKDPRARLTAAQALSHPWVRE 227
           LL   P ARLT  +A +H +  E
Sbjct: 299 LLEYTPTARLTPLEACAHSFFDE 321

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 83/203 (40%), Gaps = 33/203 (16%)
Query: 56  LAKKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           +A+  SR  +    + V+    Q+ R  A  H  G+ HRD+KP+N L     + + LK  
Sbjct: 108 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLC 165
Query: 112 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWD 169
           DFG +  +  G+     + S YY APE++   +   S  DVWS G +   LL G+  F  
Sbjct: 166 DFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225
Query: 170 KTEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKK 204
            +      E+++                      P  +  PW     P     A     +
Sbjct: 226 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 285
Query: 205 LLVKDPRARLTAAQALSHPWVRE 227
           LL   P ARLT  +A +H +  E
Sbjct: 286 LLEYTPTARLTPLEACAHSFFDE 308

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 83/203 (40%), Gaps = 33/203 (16%)
Query: 56  LAKKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           +A+  SR  +    + V+    Q+ R  A  H  G+ HRD+KP+N L     + + LK  
Sbjct: 108 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLC 165
Query: 112 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWD 169
           DFG +  +  G+     + S YY APE++   +   S  DVWS G +   LL G+  F  
Sbjct: 166 DFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225
Query: 170 KTEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKK 204
            +      E+++                      P  +  PW     P     A     +
Sbjct: 226 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 285
Query: 205 LLVKDPRARLTAAQALSHPWVRE 227
           LL   P ARLT  +A +H +  E
Sbjct: 286 LLEYTPTARLTPLEACAHSFFDE 308

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 83/203 (40%), Gaps = 33/203 (16%)
Query: 56  LAKKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           +A+  SR  +    + V+    Q+ R  A  H  G+ HRD+KP+N L     + + LK  
Sbjct: 109 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLC 166
Query: 112 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWD 169
           DFG +  +  G+     + S YY APE++   +   S  DVWS G +   LL G+  F  
Sbjct: 167 DFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 226
Query: 170 KTEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKK 204
            +      E+++                      P  +  PW     P     A     +
Sbjct: 227 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 286
Query: 205 LLVKDPRARLTAAQALSHPWVRE 227
           LL   P ARLT  +A +H +  E
Sbjct: 287 LLEYTPTARLTPLEACAHSFFDE 309

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 83/203 (40%), Gaps = 33/203 (16%)
Query: 56  LAKKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           +A+  SR  +    + V+    Q+ R  A  H  G+ HRD+KP+N L     + + LK  
Sbjct: 113 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLC 170
Query: 112 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWD 169
           DFG +  +  G+     + S YY APE++   +   S  DVWS G +   LL G+  F  
Sbjct: 171 DFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 230
Query: 170 KTEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKK 204
            +      E+++                      P  +  PW     P     A     +
Sbjct: 231 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 290
Query: 205 LLVKDPRARLTAAQALSHPWVRE 227
           LL   P ARLT  +A +H +  E
Sbjct: 291 LLEYTPTARLTPLEACAHSFFDE 313

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 33/203 (16%)
Query: 56  LAKKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           +A+  SR  +    + V+    Q+ R  A  H  G+ HRD+KP+N L     + + LK  
Sbjct: 108 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLC 165
Query: 112 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPF-W 168
           DFG +  +  G+     + S YY APE++   +   S  DVWS G +   LL G+  F  
Sbjct: 166 DFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225
Query: 169 DKTEDGIF----------KEVLRNK---------PDFRRKPW-----PSISNSAKDFVKK 204
           D   D +           +E +R           P  +  PW     P     A     +
Sbjct: 226 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSR 285
Query: 205 LLVKDPRARLTAAQALSHPWVRE 227
           LL   P ARLT  +A +H +  E
Sbjct: 286 LLEYTPTARLTPLEACAHSFFDE 308

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 83/203 (40%), Gaps = 33/203 (16%)
Query: 56  LAKKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           +A+  SR  +    + V+    Q+ R  A  H  G+ HRD+KP+N L     + + LK  
Sbjct: 108 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLC 165
Query: 112 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWD 169
           DFG +  +  G+     + S YY APE++   +   S  DVWS G +   LL G+  F  
Sbjct: 166 DFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225
Query: 170 KTEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKK 204
            +      E+++                      P  +  PW     P     A     +
Sbjct: 226 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 285
Query: 205 LLVKDPRARLTAAQALSHPWVRE 227
           LL   P ARLT  +A +H +  E
Sbjct: 286 LLEYTPTARLTPLEACAHSFFDE 308

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 83/203 (40%), Gaps = 33/203 (16%)
Query: 56  LAKKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           +A+  SR  +    + V+    Q+ R  A  H  G+ HRD+KP+N L     + + LK  
Sbjct: 127 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLC 184
Query: 112 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWD 169
           DFG +  +  G+     + S YY APE++   +   S  DVWS G +   LL G+  F  
Sbjct: 185 DFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 244
Query: 170 KTEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKK 204
            +      E+++                      P  +  PW     P     A     +
Sbjct: 245 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 304
Query: 205 LLVKDPRARLTAAQALSHPWVRE 227
           LL   P ARLT  +A +H +  E
Sbjct: 305 LLEYTPTARLTPLEACAHSFFDE 327

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 83/203 (40%), Gaps = 33/203 (16%)
Query: 56  LAKKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           +A+  SR  +    + V+    Q+ R  A  H  G+ HRD+KP+N L     + + LK  
Sbjct: 120 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLC 177
Query: 112 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWD 169
           DFG +  +  G+     + S YY APE++   +   S  DVWS G +   LL G+  F  
Sbjct: 178 DFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 237
Query: 170 KTEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKK 204
            +      E+++                      P  +  PW     P     A     +
Sbjct: 238 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 297
Query: 205 LLVKDPRARLTAAQALSHPWVRE 227
           LL   P ARLT  +A +H +  E
Sbjct: 298 LLEYTPTARLTPLEACAHSFFDE 320

>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A Ruthenium Organometallic Ligand Ru1 Length = 312

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 84/192 (43%), Gaps = 19/192 (9%)
Query: 50  ELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK 109
           +L D I  K      E  +     Q++     CH  G+VHRD+K EN L    +     K
Sbjct: 125 DLFDYITEK--GPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRR--GCAK 180
Query: 110 ATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPF 167
             DFG    +   + + D  G+  Y  PE + R       + VWS+G++ Y ++CG  PF
Sbjct: 181 LIDFGSGALLH-DEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPF 239
Query: 168 WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
                D   +E+L  +  F       +S      +++ L   P +R +  + L  PW++ 
Sbjct: 240 ---ERD---QEILEAELHFPAH----VSPDCCALIRRCLAPKPSSRPSLEEILLDPWMQT 289
Query: 228 GGDASEIPIDIS 239
              A ++P++ S
Sbjct: 290 --PAEDVPLNPS 299

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 83/203 (40%), Gaps = 33/203 (16%)
Query: 56  LAKKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           +A+  SR  +    + V+    Q+ R  A  H  G+ HRD+KP+N L     + + LK  
Sbjct: 112 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLC 169
Query: 112 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWD 169
           DFG +  +  G+     + S YY APE++   +   S  DVWS G +   LL G+  F  
Sbjct: 170 DFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 229
Query: 170 KTEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKK 204
            +      E+++                      P  +  PW     P     A     +
Sbjct: 230 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 289
Query: 205 LLVKDPRARLTAAQALSHPWVRE 227
           LL   P ARLT  +A +H +  E
Sbjct: 290 LLEYTPTARLTPLEACAHSFFDE 312

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 83/203 (40%), Gaps = 33/203 (16%)
Query: 56  LAKKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           +A+  SR  +    + V+    Q+ R  A  H  G+ HRD+KP+N L     + + LK  
Sbjct: 108 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLC 165
Query: 112 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWD 169
           DFG +  +  G+     + S YY APE++   +   S  DVWS G +   LL G+  F  
Sbjct: 166 DFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225
Query: 170 KTEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKK 204
            +      E+++                      P  +  PW     P     A     +
Sbjct: 226 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 285
Query: 205 LLVKDPRARLTAAQALSHPWVRE 227
           LL   P ARLT  +A +H +  E
Sbjct: 286 LLEYTPTARLTPLEACAHSFFDE 308

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 83/203 (40%), Gaps = 33/203 (16%)
Query: 56  LAKKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           +A+  SR  +    + V+    Q+ R  A  H  G+ HRD+KP+N L     + + LK  
Sbjct: 108 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLC 165
Query: 112 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWD 169
           DFG +  +  G+     + S YY APE++   +   S  DVWS G +   LL G+  F  
Sbjct: 166 DFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225
Query: 170 KTEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKK 204
            +      E+++                      P  +  PW     P     A     +
Sbjct: 226 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 285
Query: 205 LLVKDPRARLTAAQALSHPWVRE 227
           LL   P ARLT  +A +H +  E
Sbjct: 286 LLEYTPTARLTPLEACAHSFFDE 308

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 83/203 (40%), Gaps = 33/203 (16%)
Query: 56  LAKKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           +A+  SR  +    + V+    Q+ R  A  H  G+ HRD+KP+N L     + + LK  
Sbjct: 120 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLC 177
Query: 112 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWD 169
           DFG +  +  G+     + S YY APE++   +   S  DVWS G +   LL G+  F  
Sbjct: 178 DFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 237
Query: 170 KTEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKK 204
            +      E+++                      P  +  PW     P     A     +
Sbjct: 238 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 297
Query: 205 LLVKDPRARLTAAQALSHPWVRE 227
           LL   P ARLT  +A +H +  E
Sbjct: 298 LLEYTPTARLTPLEACAHSFFDE 320

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 83/203 (40%), Gaps = 33/203 (16%)
Query: 56  LAKKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           +A+  SR  +    + V+    Q+ R  A  H  G+ HRD+KP+N L     + + LK  
Sbjct: 187 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLC 244
Query: 112 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWD 169
           DFG +  +  G+     + S YY APE++   +   S  DVWS G +   LL G+  F  
Sbjct: 245 DFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 304
Query: 170 KTEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKK 204
            +      E+++                      P  +  PW     P     A     +
Sbjct: 305 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 364
Query: 205 LLVKDPRARLTAAQALSHPWVRE 227
           LL   P ARLT  +A +H +  E
Sbjct: 365 LLEYTPTARLTPLEACAHSFFDE 387

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 83/203 (40%), Gaps = 33/203 (16%)
Query: 56  LAKKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           +A+  SR  +    + V+    Q+ R  A  H  G+ HRD+KP+N L     + + LK  
Sbjct: 116 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLC 173
Query: 112 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWD 169
           DFG +  +  G+     + S YY APE++   +   S  DVWS G +   LL G+  F  
Sbjct: 174 DFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 233
Query: 170 KTEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKK 204
            +      E+++                      P  +  PW     P     A     +
Sbjct: 234 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 293
Query: 205 LLVKDPRARLTAAQALSHPWVRE 227
           LL   P ARLT  +A +H +  E
Sbjct: 294 LLEYTPTARLTPLEACAHSFFDE 316

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 85/203 (41%), Gaps = 33/203 (16%)
Query: 56  LAKKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           +A+  SR  +    + V+    Q+ R  A  H  G+ HRD+KP+N L     + + LK  
Sbjct: 108 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP--DTAVLKLC 165
Query: 112 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPF-W 168
           DFG +  +  G+     + S YY APE++   +   S  DVWS G +   LL G+  F  
Sbjct: 166 DFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 225
Query: 169 DKTEDGIF----------KEVLRNK---------PDFRRKPW-----PSISNSAKDFVKK 204
           D   D +           +E +R           P  +  PW     P     A     +
Sbjct: 226 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFAFPQIKAHPWTKVFRPRTPPEAIALCSR 285
Query: 205 LLVKDPRARLTAAQALSHPWVRE 227
           LL   P ARLT  +A +H +  E
Sbjct: 286 LLEYTPTARLTPLEACAHSFFDE 308

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 83/203 (40%), Gaps = 33/203 (16%)
Query: 56  LAKKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           +A+  SR  +    + V+    Q+ R  A  H  G+ HRD+KP+N L     + + LK  
Sbjct: 142 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLC 199
Query: 112 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWD 169
           DFG +  +  G+     + S YY APE++   +   S  DVWS G +   LL G+  F  
Sbjct: 200 DFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 259
Query: 170 KTEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKK 204
            +      E+++                      P  +  PW     P     A     +
Sbjct: 260 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 319
Query: 205 LLVKDPRARLTAAQALSHPWVRE 227
           LL   P ARLT  +A +H +  E
Sbjct: 320 LLEYTPTARLTPLEACAHSFFDE 342

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 83/203 (40%), Gaps = 33/203 (16%)
Query: 56  LAKKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           +A+  SR  +    + V+    Q+ R  A  H  G+ HRD+KP+N L     + + LK  
Sbjct: 136 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLC 193
Query: 112 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWD 169
           DFG +  +  G+     + S YY APE++   +   S  DVWS G +   LL G+  F  
Sbjct: 194 DFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 253
Query: 170 KTEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKK 204
            +      E+++                      P  +  PW     P     A     +
Sbjct: 254 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 313
Query: 205 LLVKDPRARLTAAQALSHPWVRE 227
           LL   P ARLT  +A +H +  E
Sbjct: 314 LLEYTPTARLTPLEACAHSFFDE 336

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 83/203 (40%), Gaps = 33/203 (16%)
Query: 56  LAKKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           +A+  SR  +    + V+    Q+ R  A  H  G+ HRD+KP+N L     + + LK  
Sbjct: 144 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLC 201
Query: 112 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWD 169
           DFG +  +  G+     + S YY APE++   +   S  DVWS G +   LL G+  F  
Sbjct: 202 DFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 261
Query: 170 KTEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKK 204
            +      E+++                      P  +  PW     P     A     +
Sbjct: 262 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 321
Query: 205 LLVKDPRARLTAAQALSHPWVRE 227
           LL   P ARLT  +A +H +  E
Sbjct: 322 LLEYTPTARLTPLEACAHSFFDE 344

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 83/203 (40%), Gaps = 33/203 (16%)
Query: 56  LAKKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           +A+  SR  +    + V+    Q+ R  A  H  G+ HRD+KP+N L     + + LK  
Sbjct: 146 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLC 203
Query: 112 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWD 169
           DFG +  +  G+     + S YY APE++   +   S  DVWS G +   LL G+  F  
Sbjct: 204 DFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 263
Query: 170 KTEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKK 204
            +      E+++                      P  +  PW     P     A     +
Sbjct: 264 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 323
Query: 205 LLVKDPRARLTAAQALSHPWVRE 227
           LL   P ARLT  +A +H +  E
Sbjct: 324 LLEYTPTARLTPLEACAHSFFDE 346

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 83/203 (40%), Gaps = 33/203 (16%)
Query: 56  LAKKDSRYTEKDAAVVVR----QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           +A+  SR  +    + V+    Q+ R  A  H  G+ HRD+KP+N L     + + LK  
Sbjct: 142 VARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLD--PDTAVLKLC 199
Query: 112 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWD 169
           DFG +  +  G+     + S YY APE++   +   S  DVWS G +   LL G+  F  
Sbjct: 200 DFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPG 259
Query: 170 KTEDGIFKEVLR--------------------NKPDFRRKPW-----PSISNSAKDFVKK 204
            +      E+++                      P  +  PW     P     A     +
Sbjct: 260 DSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSR 319
Query: 205 LLVKDPRARLTAAQALSHPWVRE 227
           LL   P ARLT  +A +H +  E
Sbjct: 320 LLEYTPTARLTPLEACAHSFFDE 342

>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For Catalysis And Regulation Of Non-conventional Splicing Length = 434

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 31/221 (14%)
Query: 29  RPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 88
           R + I L L  L    L E   + D  L  +     E +   ++RQ+    A  H   ++
Sbjct: 82  RFLYIALELCNLNLQDLVESKNVSDENLKLQ----KEYNPISLLRQIASGVAHLHSLKII 137
Query: 89  HRDMKPENFLF----------KSAKEDSSLKATDFGLSDFIKPGK-----KFQDIVGSAY 133
           HRD+KP+N L           ++  E+  +  +DFGL   +  G+        +  G++ 
Sbjct: 138 HRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSG 197
Query: 134 YVAPEVL--------KRKSGPESDVWSIG-VITYILLCGRRPFWDKT--EDGIFKEVLRN 182
           + APE+L        KR+     D++S+G V  YIL  G+ PF DK   E  I + +  +
Sbjct: 198 WRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIF-S 256
Query: 183 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 223
             + +     S+   A D + +++  DP  R TA + L HP
Sbjct: 257 LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297

>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin Length = 434

Iteration: 1
 Score = 60.5 bits (145), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 31/221 (14%)
Query: 29  RPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLV 88
           R + I L L  L    L E   + D  L  +     E +   ++RQ+    A  H   ++
Sbjct: 82  RFLYIALELCNLNLQDLVESKNVSDENLKLQ----KEYNPISLLRQIASGVAHLHSLKII 137
Query: 89  HRDMKPENFLF----------KSAKEDSSLKATDFGLSDFIKPGK-----KFQDIVGSAY 133
           HRD+KP+N L           ++  E+  +  +DFGL   +  G+        +  G++ 
Sbjct: 138 HRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSGTSG 197
Query: 134 YVAPEVL--------KRKSGPESDVWSIG-VITYILLCGRRPFWDKT--EDGIFKEVLRN 182
           + APE+L        KR+     D++S+G V  YIL  G+ PF DK   E  I + +  +
Sbjct: 198 WRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIF-S 256
Query: 183 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 223
             + +     S+   A D + +++  DP  R TA + L HP
Sbjct: 257 LDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHP 297

>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta (I4122) Length = 677

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAV--VVRQMLRVAAECHLHGLVHRDMKPENFLFK 100
           +  CEGG+L  + L + ++    K+  +  ++  +       H + ++HRD+KPEN + +
Sbjct: 98  MEYCEGGDL-RKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQ 156
Query: 101 SAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYI 159
              +    K  D G +  +  G+   + VG+  Y+APE+L++K    + D WS G + + 
Sbjct: 157 PGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFE 216
Query: 160 LLCGRRPF 167
            + G RPF
Sbjct: 217 CITGFRPF 224

>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta Length = 676

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 35/128 (27%), Positives = 66/128 (51%), Gaps = 4/128 (3%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAV--VVRQMLRVAAECHLHGLVHRDMKPENFLFK 100
           +  CEGG+L  + L + ++    K+  +  ++  +       H + ++HRD+KPEN + +
Sbjct: 97  MEYCEGGDL-RKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQ 155
Query: 101 SAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES-DVWSIGVITYI 159
              +    K  D G +  +  G+   + VG+  Y+APE+L++K    + D WS G + + 
Sbjct: 156 PGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFE 215
Query: 160 LLCGRRPF 167
            + G RPF
Sbjct: 216 CITGFRPF 223

>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin Length = 169

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 45/153 (29%), Positives = 82/153 (53%), Gaps = 12/153 (7%)
Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           L +E+  ++R+ FD  D D +G+I  +E++ A+ + L ++ K+  + +++  ID +  G 
Sbjct: 22  LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAM-RALGFEPKKEEIKKMISEIDKDGSGT 80
Query: 325 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG---- 380
           +DF EF+  T+   ++ E DS +  L+   AF  FD D  G IT ++LR      G    
Sbjct: 81  IDFEEFL--TMMTAKMGERDSREEILK---AFRLFDDDNSGTITIKDLRRVAKELGENLT 135
Query: 381 --SIDPLLEEADIDKDGRISLSEFRRLLRTASI 411
              +  ++ EAD + D  I   EF R+++  S+
Sbjct: 136 EEELQEMIAEADRNDDNEIDEDEFIRIMKKTSL 168

>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239 Length = 180

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 17/157 (10%)
Query: 239 SVLNNMRQFVKYSRLKQFALRALASTLD--DEELADLRDQFDAIDVDKNGSISLEEMRQA 296
           +VLNNM+ ++K+S ++   +  +A  L   +  +  + + F  +D + NGS+S  E+   
Sbjct: 5   NVLNNMKSYMKHSNIRNIIINIMAHELSVINNHIKYINELFYKLDTNHNGSLSHREIYTV 64
Query: 297 LAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAF 356
           LA      +K+  +  ILQA+D N  G + ++EF+A       +E           +AAF
Sbjct: 65  LA---SVGIKKWDINRILQALDINDRGNITYTEFMAGCYRWKNIES-------TFLKAAF 114
Query: 357 EKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDK 393
            K D D DG+I+  ++     +    D +L+  DID 
Sbjct: 115 NKIDKDEDGYISKSDI-----VSLVHDKVLDNNDIDN 146

>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 5 Length = 295

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 17/172 (9%)
Query: 64  TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD---FIK 120
            E+      +Q+L      H + +VHRD+K +N L  +      LK +DFG S     I 
Sbjct: 120 NEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTY--SGVLKISDFGTSKRLAGIN 177
Query: 121 PGKKFQDIVGSAYYVAPEVLK---RKSGPESDVWSIGVITYILLCGRRPFWDKTE--DGI 175
           P    +   G+  Y+APE++    R  G  +D+WS+G     +  G+ PF++  E    +
Sbjct: 178 PCT--ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAM 235
Query: 176 FK-EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 226
           FK  + +  P+       S+S  AK F+ K    DP  R  A   L   +++
Sbjct: 236 FKVGMFKVHPEIPE----SMSAEAKAFILKCFEPDPDKRACANDLLVDEFLK 283

>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin Length = 148

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 80/147 (54%), Gaps = 12/147 (8%)
Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 321
           A  L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + + +  +D + 
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELG-TVXRSLGCNPTEAELQDXINEVDADG 59
Query: 322 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-MHTGL-- 378
           +G ++F EF+  T      ++ DSE+  +R   AF  FD D +G+I+  ELR + T L  
Sbjct: 60  NGTINFPEFL--TXXARCXKDTDSEE-EIRE--AFRVFDKDGNGYISAAELRHVXTNLGE 114
Query: 379 ---KGSIDPLLEEADIDKDGRISLSEF 402
                 +D  + EADID DG+++  EF
Sbjct: 115 KLTDEEVDEXIREADIDGDGQVNYEEF 141

>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating Kinase 1 (Ask1) With Imidazopyridine Inhibitor Length = 269

Iteration: 1
 Score = 59.7 bits (143), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 75/166 (45%), Gaps = 17/166 (10%)
Query: 64  TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD---FIK 120
            E+      +Q+L      H + +VHRD+K +N L  +      LK +DFG S     I 
Sbjct: 106 NEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTY--SGVLKISDFGTSKRLAGIN 163
Query: 121 PGKKFQDIVGSAYYVAPEVLK---RKSGPESDVWSIGVITYILLCGRRPFWDKTE--DGI 175
           P    +   G+  Y+APE++    R  G  +D+WS+G     +  G+ PF++  E    +
Sbjct: 164 PCT--ETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAM 221
Query: 176 FK-EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           FK  + +  P+       S+S  AK F+ K    DP  R  A   L
Sbjct: 222 FKVGMFKVHPEIPE----SMSAEAKAFILKCFEPDPDKRACANDLL 263

>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam Length = 128

Iteration: 1
 Score = 59.3 bits (142), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 65/112 (58%), Gaps = 6/112 (5%)
Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 321
           +S L +E++A+ ++ F   D D NGSIS  E+   + + L     E+ V +++  ID + 
Sbjct: 1   SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVM-RSLGLSPSEAEVNDLMNEIDVDG 59
Query: 322 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR 373
           +  ++FSEF+A  L   QL+ +DSE+  L    AF+ FD + DG I+  EL+
Sbjct: 60  NHQIEFSEFLA--LMSRQLKSNDSEQELLE---AFKVFDKNGDGLISAAELK 106

>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc Length = 167

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/163 (28%), Positives = 84/163 (51%), Gaps = 14/163 (8%)
Query: 255 QFALRALAS---TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVL 311
           ++ LR L+    +L  EE+ +LR+ F   D DK+G I+  ++   + + + +   E  ++
Sbjct: 6   KYPLRNLSRKDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCM-RTMGYMPTEMELI 64
Query: 312 EILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS-QAAFEKFDIDRDGFITPE 370
           E+ Q I+ N  G VDF +FV   L   +L    ++   ++  + AF +FD + DG I+  
Sbjct: 65  ELSQQINMNLGGHVDFDDFVE--LMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTS 122
Query: 371 ELR-------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLL 406
           ELR        H      I+ ++ + D++ DGR+   EF R++
Sbjct: 123 ELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMM 165

>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole Inhibitor Length = 291

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 78/181 (43%), Gaps = 20/181 (11%)
Query: 52  LDRILAKKDSRYTEKDAAVVVRQM---LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 108
           LD  L   D ++T      ++R +   +R  AE      VHRD+   N L  S   +   
Sbjct: 102 LDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAE---MSYVHRDLAARNILVNS---NLVC 155
Query: 109 KATDFGLSDFIKPGKK---FQDIVGSAY---YVAPEVLK-RKSGPESDVWSIGVITY-IL 160
           K +DFGLS F++       +   +G      + APE +  RK    SD WS G++ + ++
Sbjct: 156 KVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVM 215
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
             G RP+WD +   +   +   + D+R  P P    S    +     KD  AR    Q +
Sbjct: 216 SFGERPYWDMSNQDVINAI---EQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVV 272
Query: 221 S 221
           S
Sbjct: 273 S 273

>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A Tetrahydronaphthalene Inhibitor Length = 282

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 18/157 (11%)
Query: 18  VNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 77
           VN++  M   T+P   ++        + CEG  L    L   ++++       + RQ  +
Sbjct: 66  VNILLFMGYSTKPQLAIV-------TQWCEGSSLYHH-LHIIETKFEMIKLIDIARQTAQ 117
Query: 78  VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGKKFQDIVGSAYY 134
                H   ++HRD+K  N       ED ++K  DFGL+          +F+ + GS  +
Sbjct: 118 GMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 174
Query: 135 VAPEVL----KRKSGPESDVWSIGVITYILLCGRRPF 167
           +APEV+    K     +SDV++ G++ Y L+ G+ P+
Sbjct: 175 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 211

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 29/182 (15%)
Query: 71  VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 130
           ++RQ LR     H + +VHRD+KPEN L  S     ++K  DFGL+           +V 
Sbjct: 125 LMRQFLRGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIYSYQMALTPVVV 181
Query: 131 SAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG-----IFKEV-LRNK 183
           + +Y APEVL + +     D+WS+G I +  +  R+P +    +      IF  + L  +
Sbjct: 182 TLWYRAPEVLLQSTYATPVDMWSVGCI-FAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 240
Query: 184 PDFRR--------------KP----WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
            D+ R              +P     P +  S    + ++L  +P  R++A +AL H ++
Sbjct: 241 DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 300
Query: 226 RE 227
            +
Sbjct: 301 HK 302

>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine Inhibitor Length = 306

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 18/157 (11%)
Query: 18  VNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 77
           VN++  M   T+P   ++        + CEG  L    L   ++++       + RQ  +
Sbjct: 91  VNILLFMGYSTKPQLAIV-------TQWCEGSSLYHH-LHIIETKFEMIKLIDIARQTAQ 142
Query: 78  VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGKKFQDIVGSAYY 134
                H   ++HRD+K  N       ED ++K  DFGL+          +F+ + GS  +
Sbjct: 143 GMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 199
Query: 135 VAPEVL----KRKSGPESDVWSIGVITYILLCGRRPF 167
           +APEV+    K     +SDV++ G++ Y L+ G+ P+
Sbjct: 200 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 236

>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With A [1, 3]thiazolo[5,4-B]pyridine Derivative Length = 284

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 18/157 (11%)
Query: 18  VNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 77
           VN++  M   T+P   ++        + CEG  L    L   ++++       + RQ  +
Sbjct: 69  VNILLFMGYSTKPQLAIV-------TQWCEGSSLYHH-LHIIETKFEMIKLIDIARQTAQ 120
Query: 78  VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGKKFQDIVGSAYY 134
                H   ++HRD+K  N       ED ++K  DFGL+          +F+ + GS  +
Sbjct: 121 GMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 177
Query: 135 VAPEVL----KRKSGPESDVWSIGVITYILLCGRRPF 167
           +APEV+    K     +SDV++ G++ Y L+ G+ P+
Sbjct: 178 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214

>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885 Length = 281

Iteration: 1
 Score = 58.2 bits (139), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 18/157 (11%)
Query: 18  VNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 77
           VN++  M   T+P   ++        + CEG  L    L   ++++       + RQ  +
Sbjct: 69  VNILLFMGYSTKPQLAIV-------TQWCEGSSLYHH-LHIIETKFEMIKLIDIARQTAQ 120
Query: 78  VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGKKFQDIVGSAYY 134
                H   ++HRD+K  N       ED ++K  DFGL+          +F+ + GS  +
Sbjct: 121 GMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 177
Query: 135 VAPEVL----KRKSGPESDVWSIGVITYILLCGRRPF 167
           +APEV+    K     +SDV++ G++ Y L+ G+ P+
Sbjct: 178 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 214

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 29/182 (15%)
Query: 71  VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 130
           ++RQ LR     H + +VHRD+KPEN L  S     ++K  DFGL+           +V 
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIYSYQMALDPVVV 173
Query: 131 SAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG-----IFKEV-LRNK 183
           + +Y APEVL + +     D+WS+G I +  +  R+P +    +      IF  + L  +
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCI-FAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 232
Query: 184 PDFRR--------------KP----WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
            D+ R              +P     P +  S    + ++L  +P  R++A +AL H ++
Sbjct: 233 DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
Query: 226 RE 227
            +
Sbjct: 293 HK 294

>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7) Length = 318

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 44/143 (30%), Positives = 66/143 (46%), Gaps = 10/143 (6%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           I   E G L D  L K D ++T      ++R +          G VHRD+   N L  S 
Sbjct: 123 IEFMENGAL-DAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHRDLAARNILVNS- 180
Query: 103 KEDSSLKATDFGLSDFIK--PGKKFQDIVGS--AYYVAPEVLK-RKSGPESDVWSIGVIT 157
             +   K +DFGLS  I+  P   +    G     + APE ++ RK    SDVWS G++ 
Sbjct: 181 --NLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVM 238
Query: 158 Y-ILLCGRRPFWDKTEDGIFKEV 179
           + ++  G RP+WD +   + K +
Sbjct: 239 WEVMSYGERPYWDMSNQDVIKAI 261

>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase Length = 307

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 18/157 (11%)
Query: 18  VNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 77
           VN++  M   T+P   ++        + CEG  L    L   ++++       + RQ  +
Sbjct: 92  VNILLFMGYSTKPQLAIV-------TQWCEGSSLYHH-LHIIETKFEMIKLIDIARQTAQ 143
Query: 78  VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGKKFQDIVGSAYY 134
                H   ++HRD+K  N       ED ++K  DFGL+          +F+ + GS  +
Sbjct: 144 GMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 200
Query: 135 VAPEVL----KRKSGPESDVWSIGVITYILLCGRRPF 167
           +APEV+    K     +SDV++ G++ Y L+ G+ P+
Sbjct: 201 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 29/182 (15%)
Query: 71  VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 130
           ++RQ LR     H + +VHRD+KPEN L  S     ++K  DFGL+           +V 
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIYSYQMALAPVVV 173
Query: 131 SAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG-----IFKEV-LRNK 183
           + +Y APEVL + +     D+WS+G I +  +  R+P +    +      IF  + L  +
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCI-FAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 232
Query: 184 PDFRR--------------KP----WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
            D+ R              +P     P +  S    + ++L  +P  R++A +AL H ++
Sbjct: 233 DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
Query: 226 RE 227
            +
Sbjct: 293 HK 294

>pdb|4H58|A Chain A, Braf In Complex With Compound 3 Length = 275

Iteration: 1
 Score = 58.2 bits (139), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 18/157 (11%)
Query: 18  VNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 77
           VN++  M   T+P   ++        + CEG  L    L   ++++       + RQ  +
Sbjct: 64  VNILLFMGYSTKPQLAIV-------TQWCEGSSLYHH-LHIIETKFEMIKLIDIARQTAQ 115
Query: 78  VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF---IKPGKKFQDIVGSAYY 134
                H   ++HRD+K  N       ED ++K  DFGL+          +F+ + GS  +
Sbjct: 116 GMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 172
Query: 135 VAPEVL----KRKSGPESDVWSIGVITYILLCGRRPF 167
           +APEV+    K     +SDV++ G++ Y L+ G+ P+
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209

>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory Domain (Cld) From Soybean Calcium-Dependent Protein Kinase- Alpha (Cdpk) Length = 87

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 259 RALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID 318
           + +A  L +EE+  L++ F  ID D +G+I+ +E++  L K +  +L ES + +++ A D
Sbjct: 11  KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGL-KRVGSELMESEIKDLMDAAD 69
Query: 319 CNTDGLVDFSEFVAATLH 336
            +  G +D+ EF+AAT+H
Sbjct: 70  IDKSGTIDYGEFIAATVH 87

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/201 (28%), Positives = 87/201 (43%), Gaps = 38/201 (18%)
Query: 62  RYTEKDAAVVVR-------QMLRVAAECHLHGLVHRDMKPENFLF--KSAKEDSSLKATD 112
           +Y +K+  V +R       Q++     CH    +HRD+KP+N L     A E   LK  D
Sbjct: 121 KYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGD 180
Query: 113 FGLS-DFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWD 169
           FGL+  F  P ++F   + + +Y  PE+L   R      D+WSI  I   +L     F  
Sbjct: 181 FGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPG 240
Query: 170 KTE-DGIFK--EVL------------------RNKPDFRRKPWPSISNS-----AKDFVK 203
            +E D +FK  EVL                  ++ P FR K    +  +       D + 
Sbjct: 241 DSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLT 300
Query: 204 KLLVKDPRARLTAAQALSHPW 224
            +L  DP  R++A  AL HP+
Sbjct: 301 AMLEMDPVKRISAKNALEHPY 321

>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g Hyperactivating Mutant In Apo Form. Length = 303

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 99/236 (41%), Gaps = 39/236 (16%)
Query: 12  ANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVV 71
           A  L+  N V PM    +   + +      ++  CE G L D I ++  ++    +   +
Sbjct: 69  AAWLERRNFVKPMTAVKKKSTLFI------QMEYCENGTLYDLIHSENLNQ-QRDEYWRL 121
Query: 72  VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-------DFIK---- 120
            RQ+L   +  H  G++HRD+KP N       E  ++K  DFGL+       D +K    
Sbjct: 122 FRQILEALSYIHSQGIIHRDLKPMNIFI---DESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 121 --PGK--KFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDG 174
             PG        +G+A YVA EVL        + D++S+G+I + ++    PF    E  
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERV 235
Query: 175 IFKEVLRN-----KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
              + LR+      PDF            K  ++ L+  DP  R  A   L+  W+
Sbjct: 236 NILKKLRSVSIEFPPDFDDNKMK----VEKKIIRLLIDHDPNKRPGARTLLNSGWL 287

>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii Dihydroquinazoline Inhibitor Length = 307

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 18/157 (11%)
Query: 18  VNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 77
           VN++  M   T+P   ++        + CEG  L    L   ++++       + RQ  +
Sbjct: 92  VNILLFMGYSTKPQLAIV-------TQWCEGSSLYHH-LHIIETKFEMIKLIDIARQTAQ 143
Query: 78  VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIKPGKKFQDIVGSAYY 134
                H   ++HRD+K  N       ED ++K  DFGL+          +F+ + GS  +
Sbjct: 144 GMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 200
Query: 135 VAPEVL----KRKSGPESDVWSIGVITYILLCGRRPF 167
           +APEV+    K     +SDV++ G++ Y L+ G+ P+
Sbjct: 201 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 237

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 84/182 (46%), Gaps = 29/182 (15%)
Query: 71  VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 130
           ++RQ LR     H + +VHRD+KPEN L  S     ++K  DFGL+           +V 
Sbjct: 117 LMRQFLRGLDFLHANCIVHRDLKPENILVTSG---GTVKLADFGLARIYSYQMALFPVVV 173
Query: 131 SAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTEDG-----IFKEV-LRNK 183
           + +Y APEVL + +     D+WS+G I +  +  R+P +    +      IF  + L  +
Sbjct: 174 TLWYRAPEVLLQSTYATPVDMWSVGCI-FAEMFRRKPLFCGNSEADQLGKIFDLIGLPPE 232
Query: 184 PDFRR--------------KP----WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
            D+ R              +P     P +  S    + ++L  +P  R++A +AL H ++
Sbjct: 233 DDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYL 292
Query: 226 RE 227
            +
Sbjct: 293 HK 294

>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An Aminoisoquinoline Inhibitor Length = 300

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 18/157 (11%)
Query: 18  VNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 77
           VN++  M   T+P   ++        + CEG  L    L   ++++       + RQ  +
Sbjct: 84  VNILLFMGYSTKPQLAIV-------TQWCEGSSLYHH-LHIIETKFEMIKLIDIARQTAQ 135
Query: 78  VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIKPGKKFQDIVGSAYY 134
                H   ++HRD+K  N       ED ++K  DFGL+          +F+ + GS  +
Sbjct: 136 GMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 192
Query: 135 VAPEVL----KRKSGPESDVWSIGVITYILLCGRRPF 167
           +APEV+    K     +SDV++ G++ Y L+ G+ P+
Sbjct: 193 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 229

>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006 Length = 276

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/157 (26%), Positives = 73/157 (46%), Gaps = 18/157 (11%)
Query: 18  VNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 77
           VN++  M   T+P   ++        + CEG  L    L   ++++       + RQ  +
Sbjct: 64  VNILLFMGYSTKPQLAIV-------TQWCEGSSLYHH-LHIIETKFEMIKLIDIARQTAQ 115
Query: 78  VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIKPGKKFQDIVGSAYY 134
                H   ++HRD+K  N       ED ++K  DFGL+          +F+ + GS  +
Sbjct: 116 GMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 172
Query: 135 VAPEVL----KRKSGPESDVWSIGVITYILLCGRRPF 167
           +APEV+    K     +SDV++ G++ Y L+ G+ P+
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209

>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006 Length = 276

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 36/129 (27%), Positives = 62/129 (48%), Gaps = 11/129 (8%)
Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
           CEG  L    L   ++++       + RQ  +     H   ++HRD+K  N       ED
Sbjct: 85  CEGSSLYHH-LHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH---ED 140
Query: 106 SSLKATDFGLSDF---IKPGKKFQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITY 158
            ++K  DFGL+          +F+ + GS  ++APEV+    K     +SDV++ G++ Y
Sbjct: 141 LTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLY 200
Query: 159 ILLCGRRPF 167
            L+ G+ P+
Sbjct: 201 ELMTGQLPY 209

>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 312

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 14/147 (9%)
Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           LD  L + D ++T      ++R +            VHRD+   N L  S   +   K +
Sbjct: 121 LDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILVNS---NLVCKVS 177
Query: 112 DFGLSDFIK---PGKKFQDIVGSAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCG 163
           DFGLS F++       +   +G      + APE ++ RK    SDVWS G++ + ++  G
Sbjct: 178 DFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYG 237
Query: 164 RRPFWDKTEDGIFKEVLRNKPDFRRKP 190
            RP+WD T   +   +   + D+R  P
Sbjct: 238 ERPYWDMTNQDVINAI---EQDYRLPP 261

>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1) Length = 307

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 74/157 (47%), Gaps = 17/157 (10%)
Query: 24  MLPPTRPMEIVLPLRKLRRIRL------CEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 77
           +L  TR + I+L +  + +  L      CEG  L    L  +++++       + RQ  +
Sbjct: 85  VLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKH-LHVQETKFQMFQLIDIARQTAQ 143
Query: 78  VAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI---VGSAYY 134
                H   ++HRDMK  N       E  ++K  DFGL+         Q +    GS  +
Sbjct: 144 GMDYLHAKNIIHRDMKSNNIFLH---EGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLW 200
Query: 135 VAPEVLKRK-SGP---ESDVWSIGVITYILLCGRRPF 167
           +APEV++ + + P   +SDV+S G++ Y L+ G  P+
Sbjct: 201 MAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPY 237

>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of Troponin I Length = 159

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 263 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 322
           S L +E +A+ +  FD  D D  G IS++E+   + + L     +  +  I++ +D +  
Sbjct: 9   SYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVM-RMLGQTPTKEELDAIIEEVDEDGS 67
Query: 323 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-- 380
           G +DF EF+   + V Q++E    K        F  FD + DG+I  EEL       G  
Sbjct: 68  GTIDFEEFL--VMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEH 125
Query: 381 ----SIDPLLEEADIDKDGRISLSEFRRLLR 407
                I+ L+++ D + DGRI   EF +++ 
Sbjct: 126 VTDEEIESLMKDGDKNNDGRIDFDEFLKMME 156

>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding Protein 1 (Cabp1) Length = 153

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 76/147 (51%), Gaps = 11/147 (7%)
Query: 268 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDF 327
           EE+ +LR+ F   D DK+G I+  ++   + + + +   E  ++E+ Q I+ N  G VDF
Sbjct: 8   EEIEELREAFREFDKDKDGYINCRDLGNCM-RTMGYMPTEMELIELSQQINMNLGGHVDF 66
Query: 328 SEFVAATLHVHQLEEHDSEKWHLRS-QAAFEKFDIDRDGFITPEELR-------MHTGLK 379
            +FV   L   +L    ++   ++  + AF +FD + DG I+  ELR        H    
Sbjct: 67  DDFVE--LMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGH 124
Query: 380 GSIDPLLEEADIDKDGRISLSEFRRLL 406
             I+ ++ + D++ DGR+   EF R++
Sbjct: 125 RDIEEIIRDVDLNGDGRVDFEEFVRMM 151

>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex Length = 302

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 76/181 (41%), Gaps = 20/181 (11%)
Query: 52  LDRILAKKDSRYTEKDAAVVVRQM---LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 108
           LD  L   D ++T      ++R +   +R  AE      VHRD+   N L  S   +   
Sbjct: 104 LDSFLRLNDGQFTVIQLVGMLRGIASGMRYLAE---MSYVHRDLAARNILVNS---NLVC 157
Query: 109 KATDFGLSDFIKPGKKFQDIVGS------AYYVAPEVLK-RKSGPESDVWSIGVITY-IL 160
           K +DFGLS F++          S        + APE +  RK    SD WS G++ + ++
Sbjct: 158 KVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVM 217
Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
             G RP+WD +   +   +   + D+R  P P    S    +     KD  AR    Q +
Sbjct: 218 SFGERPYWDMSNQDVINAI---EQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVV 274
Query: 221 S 221
           S
Sbjct: 275 S 275

>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5) Length = 295

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 41/134 (30%), Positives = 62/134 (46%), Gaps = 9/134 (6%)
Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           LD  L K D ++T      ++R +          G VHRD+   N L  S   +   K +
Sbjct: 110 LDTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYVHRDLAARNILINS---NLVCKVS 166
Query: 112 DFGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRR 165
           DFGLS  ++  P   +    G     + APE +  RK    SDVWS G++ + ++  G R
Sbjct: 167 DFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGER 226
Query: 166 PFWDKTEDGIFKEV 179
           P+W+ T   + K V
Sbjct: 227 PYWEMTNQDVIKAV 240

>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal Muscle Troponin C Length = 162

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           L +E +A+ +  FD  D D  G IS +E+   + + L     +  +  I++ +D +  G 
Sbjct: 14  LSEEMIAEFKAAFDMFDADGGGDISTKELGTVM-RMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 325 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---HTG---L 378
           +DF EF+   + V Q++E    K        F  FD + DGFI  EEL      TG   +
Sbjct: 73  IDFEEFL--VMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVI 130
Query: 379 KGSIDPLLEEADIDKDGRISLSEFRRLLR 407
           +  I+ L++++D + DGRI   EF +++ 
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFLKMME 159

>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human Tbk1 Kinase- Uld Domain Length = 396

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 13/142 (9%)
Query: 38  RKLRRIRLCEGGELLDRILAKKDSRYT--EKDAAVVVRQMLRVAAECHLHGLVHRDMKPE 95
            K+  +  C  G L   +L +  + Y   E +  +V+R ++        +G+VHR++KP 
Sbjct: 83  HKVLIMEFCPCGSLYT-VLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPG 141
Query: 96  NFLFKSAKEDSSL-KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR---------KSG 145
           N +    ++  S+ K TDFG +  ++  ++F  + G+  Y+ P++ +R         K G
Sbjct: 142 NIMRVIGEDGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYG 201
Query: 146 PESDVWSIGVITYILLCGRRPF 167
              D+WSIGV  Y    G  PF
Sbjct: 202 ATVDLWSIGVTFYHAATGSLPF 223

>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding Protein 1 (Cabp1) Length = 153

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 76/147 (51%), Gaps = 11/147 (7%)
Query: 268 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDF 327
           EE+ +LR+ F   D DK+G I+  ++   + + + +   E  ++E+ Q I+ N  G VDF
Sbjct: 8   EEIEELREAFREFDKDKDGYINCRDLGNCM-RTMGYMPTEMELIELSQQINMNLGGHVDF 66
Query: 328 SEFVAATLHVHQLEEHDSEKWHLRS-QAAFEKFDIDRDGFITPEELR-------MHTGLK 379
            +FV   L   +L    ++   ++  + AF +FD + DG I+  ELR        H    
Sbjct: 67  DDFVE--LMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGH 124
Query: 380 GSIDPLLEEADIDKDGRISLSEFRRLL 406
             I+ ++ + D++ DGR+   EF R++
Sbjct: 125 RDIEEIIRDVDLNGDGRVDFEEFVRMM 151

>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In Complex With Adp Length = 432

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 84/194 (43%), Gaps = 16/194 (8%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           I LC     L   + +KD  +   +   +++Q     A  H   +VHRD+KP N L    
Sbjct: 97  IELCAA--TLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMP 154
Query: 103 KEDSSLKA--TDFGLSDFIKPGK----KFQDIVGSAYYVAPEVLKR--KSGPES--DVWS 152
                +KA  +DFGL   +  G+    +   + G+  ++APE+L    K  P    D++S
Sbjct: 155 NAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFS 214
Query: 153 IGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFR-RKPWPSISNSAKDFVKKLLVKDP 210
            G + Y ++  G  PF    +      +L          P       A++ ++K++  DP
Sbjct: 215 AGCVFYYVISEGSHPFGKSLQRQ--ANILLGACSLDCLHPEKHEDVIARELIEKMIAMDP 272
Query: 211 RARLTAAQALSHPW 224
           + R +A   L HP+
Sbjct: 273 QKRPSAKHVLKHPF 286

>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase Domain Phosphorylated On Ser172 Length = 319

Iteration: 1
 Score = 56.2 bits (134), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 69/142 (48%), Gaps = 13/142 (9%)
Query: 38  RKLRRIRLCEGGELLDRILAKKDSRYT--EKDAAVVVRQMLRVAAECHLHGLVHRDMKPE 95
            K+  +  C  G L   +L +  + Y   E +  +V+R ++        +G+VHR++KP 
Sbjct: 83  HKVLIMEFCPCGSLYT-VLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPG 141
Query: 96  NFLFKSAKEDSSL-KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR---------KSG 145
           N +    ++  S+ K TDFG +  ++  ++F  + G+  Y+ P++ +R         K G
Sbjct: 142 NIMRVIGEDGQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERAVLRKDHQKKYG 201
Query: 146 PESDVWSIGVITYILLCGRRPF 167
              D+WSIGV  Y    G  PF
Sbjct: 202 ATVDLWSIGVTFYHAATGSLPF 223

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 37/196 (18%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI--KPGKK---FQDI 128
           Q+LR     H   ++HRD+KP N L     E+  LK  DFG++  +   P +      + 
Sbjct: 166 QLLRGLKYMHSAQVIHRDLKPSNLL---VNENCELKIGDFGMARGLCTSPAEHQYFMTEY 222
Query: 129 VGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKT--------------- 171
           V + +Y APE++    +     D+WS+G I   +L  R+ F  K                
Sbjct: 223 VATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTP 282
Query: 172 EDGIFKEV--------LRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQA 219
              + + V        +++ P  +  PW    P     A   + ++L  +P AR++AA A
Sbjct: 283 SPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAA 342
Query: 220 LSHPWVREGGDASEIP 235
           L HP++ +  D  + P
Sbjct: 343 LRHPFLAKYHDPDDEP 358

>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX Length = 149

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 83/153 (54%), Gaps = 12/153 (7%)
Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           L +E+  ++R+ FD  D D +G+I  +E++ A+ + L ++ K+  + +++  ID +  G 
Sbjct: 2   LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAM-RALGFEPKKEEIKKMIADIDKDGSGT 60
Query: 325 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG---- 380
           +DF EF+   +   ++ E DS +  ++   AF  FD D  G I+ + L+      G    
Sbjct: 61  IDFEEFL--QMMTAKMGERDSREEIMK---AFRLFDDDETGKISFKNLKRVAKELGENMT 115
Query: 381 --SIDPLLEEADIDKDGRISLSEFRRLLRTASI 411
              +  +++EAD D DG ++  EF R+++  S+
Sbjct: 116 DEELQEMIDEADRDGDGEVNEEEFFRIMKKTSL 148

>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey Skeletal Muscle At 2.0 Angstroms Resolution Length = 162

Iteration: 1
 Score = 55.8 bits (133), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 9/149 (6%)
Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           L +E +A+ +  FD  D D  G IS +E+   + + L     +  +  I++ +D +  G 
Sbjct: 14  LSEEMIAEFKAAFDMFDADGGGDISTKELGTVM-RMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 325 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---HTG---L 378
           +DF EF+   + V Q++E    K     +  F  FD + DGFI  EEL      TG    
Sbjct: 73  IDFEEFL--VMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVT 130
Query: 379 KGSIDPLLEEADIDKDGRISLSEFRRLLR 407
           +  I+ L++++D + DGRI   EF +++ 
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFLKMME 159

>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal Troponin C Length = 159

Iteration: 1
 Score = 55.8 bits (133), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 263 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 322
           S L +E +A+ +  FD  D D  G IS++E+   + + L     +  +  I++ +D +  
Sbjct: 9   SYLSEEMIAEFKAAFDMFDADGGGDISVKELGTVM-RMLGQTPTKEELDAIIEEVDEDGS 67
Query: 323 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-- 380
           G +DF EF+   + V Q++E    K        F  FD + DG+I  EEL       G  
Sbjct: 68  GTIDFEEFL--VMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEH 125
Query: 381 ----SIDPLLEEADIDKDGRISLSEFRRLLR 407
                I+ L+++ D + DGRI   EF +++ 
Sbjct: 126 VTDEEIESLMKDGDKNNDGRIDFDEFLKMME 156

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 50/196 (25%), Positives = 85/196 (43%), Gaps = 37/196 (18%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI--KPGKK---FQDI 128
           Q+LR     H   ++HRD+KP N L     E+  LK  DFG++  +   P +      + 
Sbjct: 167 QLLRGLKYMHSAQVIHRDLKPSNLL---VNENCELKIGDFGMARGLCTSPAEHQYFMTEY 223
Query: 129 VGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKT--------------- 171
           V + +Y APE++    +     D+WS+G I   +L  R+ F  K                
Sbjct: 224 VATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTP 283
Query: 172 EDGIFKEV--------LRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQA 219
              + + V        +++ P  +  PW    P     A   + ++L  +P AR++AA A
Sbjct: 284 SPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARISAAAA 343
Query: 220 LSHPWVREGGDASEIP 235
           L HP++ +  D  + P
Sbjct: 344 LRHPFLAKYHDPDDEP 359

>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+- Activated State Length = 162

Iteration: 1
 Score = 55.5 bits (132), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           L +E +A+ +  FD  D D  G IS +E+   + + L     +  +  I++ +D +  G 
Sbjct: 14  LSEEMIAEFKAAFDMFDADGGGDISTKELGTVM-RMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 325 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---HTG---L 378
           +DF EF+   + V Q++E    K        F  FD + DGFI  EEL      TG    
Sbjct: 73  IDFEEFL--VMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVT 130
Query: 379 KGSIDPLLEEADIDKDGRISLSEFRRLLR 407
           +  I+ L++++D + DGRI   EF +++ 
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFLKMME 159

>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight Muscle Length = 159

Iteration: 1
 Score = 55.1 bits (131), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           L +E +A+ +  FD  D D  G IS +E+   + + L     +  +  I++ +D +  G 
Sbjct: 11  LSEEMIAEFKAAFDMFDADGGGDISTKELGTVM-RMLGQNPTKEELDAIIEEVDEDGSGT 69
Query: 325 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---HTG---L 378
           +DF EF+   + V Q++E    K        F  FD + DGFI  EEL      TG    
Sbjct: 70  IDFEEFL--VMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVT 127
Query: 379 KGSIDPLLEEADIDKDGRISLSEFRRLLR 407
           +  I+ L++++D + DGRI   EF +++ 
Sbjct: 128 EEDIEDLMKDSDKNNDGRIDFDEFLKMME 156

>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742f Triple Mutant Length = 373

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           LD  L K D+++T      ++R +          G VHRD+   N L  S   +   K +
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGFVHRDLAARNILINS---NLVCKVS 189
Query: 112 DFGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRR 165
           DFGLS  ++  P   +    G     + +PE +  RK    SDVWS G++ + ++  G R
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 166 PFWDKTEDGIFKEV 179
           P+W+ +   + K V
Sbjct: 250 PYWEMSNQDVIKAV 263

>pdb|2OBH|A Chain A, Centrin-Xpc Peptide Length = 143

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 82/147 (55%), Gaps = 12/147 (8%)
Query: 267 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD 326
           +E+  ++R+ FD  D D  G+I ++E++ A+ + L ++ K+  + +++  ID    G ++
Sbjct: 2   EEQKQEIREAFDLFDADGTGTIDVKELKVAM-RALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 327 FSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------ 380
           F +F+  T+   ++ E D+++  L+   AF+ FD D  G I+ + L+      G      
Sbjct: 61  FGDFL--TVMTQKMSEKDTKEEILK---AFKLFDDDETGKISFKNLKRVAKELGENLTDE 115
Query: 381 SIDPLLEEADIDKDGRISLSEFRRLLR 407
            +  +++EAD D DG +S  EF R+++
Sbjct: 116 ELQEMIDEADRDGDGEVSEQEFLRIMK 142

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 94/244 (38%), Gaps = 83/244 (34%)
Query: 64  TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI---- 119
           TE+    ++  +L      H  G++HRD+KP N L     +D S+K  DFGL+  I    
Sbjct: 127 TEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLL---NQDCSVKVCDFGLARTINSEK 183
Query: 120 ------------KPG-------KKFQDIVGSAYYVAPE--VLKRKSGPESDVWSIGVITY 158
                       +PG       K+    V + +Y APE  +L+       D+WS G I  
Sbjct: 184 DTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFA 243
Query: 159 ILL----------CGRRPFW----------DKTEDGIFKEVLR----------------- 181
            LL            R P +          D+    + ++  R                 
Sbjct: 244 ELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDD 303
Query: 182 ----NKPDF--------RRKP------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 223
               NKP+          RKP      +PSIS+   + ++ +L  +P  R+T  QAL HP
Sbjct: 304 LKNINKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHP 363
Query: 224 WVRE 227
           ++++
Sbjct: 364 YLKD 367

>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In The Two-Calcium State At 2-Angstroms Resolution Length = 162

Iteration: 1
 Score = 55.1 bits (131), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 74/149 (49%), Gaps = 9/149 (6%)
Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           L +E +A+ +  FD  D D  G IS +E+   + + L     +  +  I++ +D +  G 
Sbjct: 14  LSEEMIAEFKAAFDMFDADGGGDISTKELGTVM-RMLGQNPTKEELDAIIEEVDEDGSGT 72
Query: 325 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---HTG---L 378
           +DF EF+   + V Q++E    K        F  FD + DGFI  EEL      TG    
Sbjct: 73  IDFEEFL--VMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEILRATGEHVT 130
Query: 379 KGSIDPLLEEADIDKDGRISLSEFRRLLR 407
           +  I+ L++++D + DGRI   EF +++ 
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFLKMME 159

>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure Length = 344

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           LD  L K D+++T      ++R +          G VHRD+   N L  S   +   K +
Sbjct: 104 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVS 160
Query: 112 DFGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRR 165
           DFGLS  ++  P   +    G     + +PE +  RK    SDVWS G++ + ++  G R
Sbjct: 161 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 220
Query: 166 PFWDKTEDGIFKEV 179
           P+W+ +   + K V
Sbjct: 221 PYWEMSNQDVIKAV 234

>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound Structure Length = 344

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           LD  L K D+++T      ++R +          G VHRD+   N L  S   +   K +
Sbjct: 104 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVS 160
Query: 112 DFGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRR 165
           DFGLS  ++  P   +    G     + +PE +  RK    SDVWS G++ + ++  G R
Sbjct: 161 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 220
Query: 166 PFWDKTEDGIFKEV 179
           P+W+ +   + K V
Sbjct: 221 PYWEMSNQDVIKAV 234

>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596:y602:s768g Triple Mutant Length = 373

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 64/140 (45%), Gaps = 21/140 (15%)
Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           LD  L K D+++T      ++R +          G VHRD+   N L  S   +   K +
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVS 189
Query: 112 DFGLSDFIKPGKKFQDIVGSAY----------YVAPEVLK-RKSGPESDVWSIGVITY-I 159
           DFGL      G+  +D   +AY          + +PE +  RK    SDVWS G++ + +
Sbjct: 190 DFGL------GRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEV 243
Query: 160 LLCGRRPFWDKTEDGIFKEV 179
           +  G RP+W+ +   + K V
Sbjct: 244 MSYGERPYWEMSNQDVIKAV 263

>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Dephosphorylated, Amp-Pnp Bound Length = 373

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           LD  L K D+++T      ++R +          G VHRD+   N L  S   +   K +
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVS 189
Query: 112 DFGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRR 165
           DFGLS  ++  P   +    G     + +PE +  RK    SDVWS G++ + ++  G R
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 166 PFWDKTEDGIFKEV 179
           P+W+ +   + K V
Sbjct: 250 PYWEMSNQDVIKAV 263

>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor Awl-Ii- 38.3 Length = 361

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           LD  L K D+++T      ++R +          G VHRD+   N L  S   +   K +
Sbjct: 121 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVS 177
Query: 112 DFGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRR 165
           DFGLS  ++  P   +    G     + +PE +  RK    SDVWS G++ + ++  G R
Sbjct: 178 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 237
Query: 166 PFWDKTEDGIFKEV 179
           P+W+ +   + K V
Sbjct: 238 PYWEMSNQDVIKAV 251

>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant Length = 373

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           LD  L K D+++T      ++R +          G VHRD+   N L  S   +   K +
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVS 189
Query: 112 DFGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRR 165
           DFGLS  ++  P   +    G     + +PE +  RK    SDVWS G++ + ++  G R
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 166 PFWDKTEDGIFKEV 179
           P+W+ +   + K V
Sbjct: 250 PYWEMSNQDVIKAV 263

>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant Length = 373

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           LD  L K D+++T      ++R +          G VHRD+   N L  S   +   K +
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVS 189
Query: 112 DFGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRR 165
           DFGLS  ++  P   +    G     + +PE +  RK    SDVWS G++ + ++  G R
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 166 PFWDKTEDGIFKEV 179
           P+W+ +   + K V
Sbjct: 250 PYWEMSNQDVIKAV 263

>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f Double Mutant Length = 373

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           LD  L K D+++T      ++R +          G VHRD+   N L  S   +   K +
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVS 189
Query: 112 DFGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRR 165
           DFGLS  ++  P   +    G     + +PE +  RK    SDVWS G++ + ++  G R
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 166 PFWDKTEDGIFKEV 179
           P+W+ +   + K V
Sbjct: 250 PYWEMSNQDVIKAV 263

>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To Substrate Kqwdnye[ptyr]iw Length = 371

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           LD  L K D+++T      ++R +          G VHRD+   N L  S   +   K +
Sbjct: 131 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVS 187
Query: 112 DFGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRR 165
           DFGLS  ++  P   +    G     + +PE +  RK    SDVWS G++ + ++  G R
Sbjct: 188 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 247
Query: 166 PFWDKTEDGIFKEV 179
           P+W+ +   + K V
Sbjct: 248 PYWEMSNQDVIKAV 261

>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane Region Length = 373

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           LD  L K D+++T      ++R +          G VHRD+   N L  S   +   K +
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVS 189
Query: 112 DFGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRR 165
           DFGLS  ++  P   +    G     + +PE +  RK    SDVWS G++ + ++  G R
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 166 PFWDKTEDGIFKEV 179
           P+W+ +   + K V
Sbjct: 250 PYWEMSNQDVIKAV 263

>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In Complex With Adp Length = 286

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 14/147 (9%)
Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           LD  L + D ++T      ++R +            VHR +   N L  S   +   K +
Sbjct: 95  LDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRALAARNILVNS---NLVCKVS 151
Query: 112 DFGLSDFIK---PGKKFQDIVGSAY---YVAPEVLK-RKSGPESDVWSIGVITY-ILLCG 163
           DFGLS F++       +   +G      + APE ++ RK    SDVWS G++ + ++  G
Sbjct: 152 DFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYG 211
Query: 164 RRPFWDKTEDGIFKEVLRNKPDFRRKP 190
            RP+WD T   +   +   + D+R  P
Sbjct: 212 ERPYWDMTNQDVINAI---EQDYRLPP 235

>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:y742a Triple Mutant Length = 373

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           LD  L K D+++T      ++R +          G VHRD+   N L  S   +   K +
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGAVHRDLAARNILINS---NLVCKVS 189
Query: 112 DFGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRR 165
           DFGLS  ++  P   +    G     + +PE +  RK    SDVWS G++ + ++  G R
Sbjct: 190 DFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 166 PFWDKTEDGIFKEV 179
           P+W+ +   + K V
Sbjct: 250 PYWEMSNQDVIKAV 263

>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In A Putative Auto-Inhibition State Length = 340

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 69/157 (43%), Gaps = 16/157 (10%)
Query: 78  VAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 134
           V A  HLH    ++HRD+KP N L  +  +   +K  DFG+S ++          G   Y
Sbjct: 163 VKALEHLHSKLSVIHRDVKPSNVLINALGQ---VKMCDFGISGYLVDSVAKTIDAGCKPY 219
Query: 135 VAPEVL-----KRKSGPESDVWSIGVITYILLCGRRPF--WDKTEDGIFKEVLRNKPDFR 187
           +APE +     ++    +SD+WS+G+    L   R P+  W      + + V    P   
Sbjct: 220 MAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQL- 278
Query: 188 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 224
             P    S    DF  + L K+ + R T  + + HP+
Sbjct: 279 --PADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPF 313

>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With Vuf 12058 Length = 285

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 9/134 (6%)
Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           LD  L K D R+T      ++R +            VHRD+   N L  S   +   K +
Sbjct: 96  LDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNS---NLVCKVS 152
Query: 112 DFGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRR 165
           DFG+S  ++  P   +    G     + APE +  RK    SDVWS G++ + ++  G R
Sbjct: 153 DFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER 212
Query: 166 PFWDKTEDGIFKEV 179
           P+WD +   + K +
Sbjct: 213 PYWDMSNQDVIKAI 226

>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain Length = 291

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 9/134 (6%)
Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           LD  L K D R+T      ++R +            VHRD+   N L  S   +   K +
Sbjct: 102 LDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSYVHRDLAARNILVNS---NLVCKVS 158
Query: 112 DFGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRR 165
           DFG+S  ++  P   +    G     + APE +  RK    SDVWS G++ + ++  G R
Sbjct: 159 DFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER 218
Query: 166 PFWDKTEDGIFKEV 179
           P+WD +   + K +
Sbjct: 219 PYWDMSNQDVIKAI 232

>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild- Type In Apo Form. Length = 303

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/236 (25%), Positives = 98/236 (41%), Gaps = 39/236 (16%)
Query: 12  ANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVV 71
           A  L+  N V PM    +   + +      ++  CE   L D I ++  ++    +   +
Sbjct: 69  AAWLERRNFVKPMTAVKKKSTLFI------QMEYCENRTLYDLIHSENLNQ-QRDEYWRL 121
Query: 72  VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-------DFIK---- 120
            RQ+L   +  H  G++HRD+KP N       E  ++K  DFGL+       D +K    
Sbjct: 122 FRQILEALSYIHSQGIIHRDLKPMNIFI---DESRNVKIGDFGLAKNVHRSLDILKLDSQ 178
Query: 121 --PGK--KFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDG 174
             PG        +G+A YVA EVL        + D++S+G+I + ++    PF    E  
Sbjct: 179 NLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIY---PFSTGMERV 235
Query: 175 IFKEVLRN-----KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
              + LR+      PDF            K  ++ L+  DP  R  A   L+  W+
Sbjct: 236 NILKKLRSVSIEFPPDFDDNKMK----VEKKIIRLLIDHDPNKRPGARTLLNSGWL 287

>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a) Length = 306

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 9/134 (6%)
Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           LD  L K D R+T      ++R +            VHRD+   N L  S   +   K +
Sbjct: 117 LDAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDMSAVHRDLAARNILVNS---NLVCKVS 173
Query: 112 DFGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRR 165
           DFG+S  ++  P   +    G     + APE +  RK    SDVWS G++ + ++  G R
Sbjct: 174 DFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGER 233
Query: 166 PFWDKTEDGIFKEV 179
           P+WD +   + K +
Sbjct: 234 PYWDMSNQDVIKAI 247

>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f:s768a Triple Mutant Length = 373

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 9/134 (6%)
Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           LD  L K D+++T      ++R +          G VHRD+   N L  S   +   K +
Sbjct: 133 LDSFLRKHDAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINS---NLVCKVS 189
Query: 112 DFGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRR 165
           DFGL+  ++  P   +    G     + +PE +  RK    SDVWS G++ + ++  G R
Sbjct: 190 DFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 166 PFWDKTEDGIFKEV 179
           P+W+ +   + K V
Sbjct: 250 PYWEMSNQDVIKAV 263

>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d) Length = 290

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 69/157 (43%), Gaps = 16/157 (10%)
Query: 78  VAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 134
           V A  HLH    ++HRD+KP N L  +  +   +K  DFG+S ++          G   Y
Sbjct: 119 VKALEHLHSKLSVIHRDVKPSNVLINALGQ---VKMCDFGISGYLVDDVAKDIDAGCKPY 175
Query: 135 VAPEVL-----KRKSGPESDVWSIGVITYILLCGRRPF--WDKTEDGIFKEVLRNKPDFR 187
           +APE +     ++    +SD+WS+G+    L   R P+  W      + + V    P   
Sbjct: 176 MAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQL- 234
Query: 188 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 224
             P    S    DF  + L K+ + R T  + + HP+
Sbjct: 235 --PADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPF 269

>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein Kinase Length = 333

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 13/147 (8%)
Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           LD+ L +KD  ++      ++R +            VHRD+   N L  S   +   K +
Sbjct: 133 LDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNS---NLVCKVS 189
Query: 112 DFGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRR 165
           DFGLS  ++  P   +    G     + APE +  RK    SDVWS G++ + ++  G R
Sbjct: 190 DFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGER 249
Query: 166 PFWDKTEDGIFKEVLRNKPDFRRKPWP 192
           P+W+ +      EV++   D  R P P
Sbjct: 250 PYWELSN----HEVMKAINDGFRLPTP 272

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 80/207 (38%), Gaps = 42/207 (20%)
Query: 51  LLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 110
           LL  +L K    +T  +   V++ +L      H + ++HRDMK  N L      D  LK 
Sbjct: 114 LLSNVLVK----FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKL 166
Query: 111 TDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCG 163
            DFGL+      K     ++ + V + +Y  PE+L  +R  GP  D+W  G I   +   
Sbjct: 167 ADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR 226
Query: 164 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN--------------------------- 196
                  TE      + +       + WP++ N                           
Sbjct: 227 SPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRD 286
Query: 197 -SAKDFVKKLLVKDPRARLTAAQALSH 222
             A D + KLLV DP  R+ +  AL+H
Sbjct: 287 PYALDLIDKLLVLDPAQRIDSDDALNH 313

>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 9/134 (6%)
Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           LD  L   D ++T      ++R +          G VHRD+   N L  S   +   K +
Sbjct: 137 LDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDS---NLVCKVS 193
Query: 112 DFGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRR 165
           DFGLS  ++  P   +    G     + APE +  R     SDVWS GV+ + +L  G R
Sbjct: 194 DFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGER 253
Query: 166 PFWDKTEDGIFKEV 179
           P+W+ T   +   V
Sbjct: 254 PYWNMTNRDVISSV 267

>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik) Length = 356

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/183 (26%), Positives = 82/183 (44%), Gaps = 12/183 (6%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + L EGG L    L K+     E  A   + Q L      H   ++H D+K +N L  S 
Sbjct: 145 MELLEGGSLGQ--LVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSD 202
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIV------GSAYYVAPE-VLKRKSGPESDVWSIGV 155
              ++L   DFG +  ++P    +D++      G+  ++APE VL R    + DVWS   
Sbjct: 203 GSHAAL--CDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCC 260
Query: 156 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 215
           +   +L G  P+       +  ++    P  R  P PS +      +++ L K+P  R++
Sbjct: 261 MMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIP-PSCAPLTAQAIQEGLRKEPIHRVS 319
Query: 216 AAQ 218
           AA+
Sbjct: 320 AAE 322

>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1) Length = 311

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/161 (26%), Positives = 66/161 (40%), Gaps = 18/161 (11%)
Query: 72  VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 131
           +R  L   A  H  GLVH D+KP N            K  DFGL   +      +   G 
Sbjct: 163 LRDTLLALAHLHSQGLVHLDVKPANIFLGP---RGRCKLGDFGLLVELGTAGAGEVQEGD 219
Query: 132 AYYVAPEVLKRKSGPESDVWSIGVITYILLCGRR-----PFWDKTEDGIFKEVLRNKPDF 186
             Y+APE+L+   G  +DV+S+G+    + C          W +   G         P+F
Sbjct: 220 PRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYL------PPEF 273
Query: 187 RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
                  +S+  +  +  +L  DP+ R TA   L+ P +R+
Sbjct: 274 TA----GLSSELRSVLVMMLEPDPKLRATAEALLALPVLRQ 310

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 52.4 bits (124), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 80/207 (38%), Gaps = 42/207 (20%)
Query: 51  LLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 110
           LL  +L K    +T  +   V++ +L      H + ++HRDMK  N L      D  LK 
Sbjct: 114 LLSNVLVK----FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKL 166
Query: 111 TDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCG 163
            DFGL+      K     ++ + V + +Y  PE+L  +R  GP  D+W  G I   +   
Sbjct: 167 ADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR 226
Query: 164 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN--------------------------- 196
                  TE      + +       + WP++ N                           
Sbjct: 227 SPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRD 286
Query: 197 -SAKDFVKKLLVKDPRARLTAAQALSH 222
             A D + KLLV DP  R+ +  AL+H
Sbjct: 287 PYALDLIDKLLVLDPAQRIDSDDALNH 313

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 80/207 (38%), Gaps = 42/207 (20%)
Query: 51  LLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 110
           LL  +L K    +T  +   V++ +L      H + ++HRDMK  N L      D  LK 
Sbjct: 114 LLSNVLVK----FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKL 166
Query: 111 TDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCG 163
            DFGL+      K     ++ + V + +Y  PE+L  +R  GP  D+W  G I   +   
Sbjct: 167 ADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR 226
Query: 164 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN--------------------------- 196
                  TE      + +       + WP++ N                           
Sbjct: 227 SPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRD 286
Query: 197 -SAKDFVKKLLVKDPRARLTAAQALSH 222
             A D + KLLV DP  R+ +  AL+H
Sbjct: 287 PYALDLIDKLLVLDPAQRIDSDDALNH 313

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 80/207 (38%), Gaps = 42/207 (20%)
Query: 51  LLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA 110
           LL  +L K    +T  +   V++ +L      H + ++HRDMK  N L      D  LK 
Sbjct: 113 LLSNVLVK----FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLI---TRDGVLKL 165
Query: 111 TDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCG 163
            DFGL+      K     ++ + V + +Y  PE+L  +R  GP  D+W  G I   +   
Sbjct: 166 ADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTR 225
Query: 164 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN--------------------------- 196
                  TE      + +       + WP++ N                           
Sbjct: 226 SPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRD 285
Query: 197 -SAKDFVKKLLVKDPRARLTAAQALSH 222
             A D + KLLV DP  R+ +  AL+H
Sbjct: 286 PYALDLIDKLLVLDPAQRIDSDDALNH 312

>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium Binding Protein From Entamoeba Histolytica Length = 134

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Composition-based stats.
 Identities = 38/130 (29%), Positives = 70/130 (53%), Gaps = 10/130 (7%)
Query: 277 FDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLE-ILQAIDCNTDGLVDFSEFVAATL 335
           F  +D + +GS+S EE++  ++   P  +K  ++L+ I +AID + +G +D +EF   T 
Sbjct: 6   FKQLDANGDGSVSYEEVKAFVSSKRP--IKNEQLLQLIFKAIDIDGNGEIDLAEF---TK 60
Query: 336 HVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---HTGLKGSIDPLLEEADID 392
               ++E D     +  +  ++  D D DG +T EE+       G +  +D ++ +AD +
Sbjct: 61  FAAAVKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGYEKVVDQIM-KADAN 119
Query: 393 KDGRISLSEF 402
            DG I+L EF
Sbjct: 120 GDGYITLEEF 129

>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik) Length = 371

Iteration: 1
 Score = 51.6 bits (122), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 51/183 (27%), Positives = 81/183 (44%), Gaps = 12/183 (6%)
Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           + L EGG L    L K+     E  A   + Q L      H   ++H D+K +N L  S 
Sbjct: 164 MELLEGGSLGQ--LVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSD 221
Query: 103 KEDSSLKATDFGLSDFIKP---GKKFQD---IVGSAYYVAPE-VLKRKSGPESDVWSIGV 155
              ++L   DFG +  ++P   GK       I G+  ++APE VL R    + DVWS   
Sbjct: 222 GSHAAL--CDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWSSCC 279
Query: 156 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 215
           +   +L G  P+       +  ++    P  R  P PS +      +++ L K+P  R++
Sbjct: 280 MMLHMLNGCHPWTQFFRGPLCLKIASEPPPVREIP-PSCAPLTAQAIQEGLRKEPIHRVS 338
Query: 216 AAQ 218
           AA+
Sbjct: 339 AAE 341

>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits Length = 689

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 87/179 (48%), Gaps = 14/179 (7%)
Query: 2   IKILIGDTRSANCLDMVNLV-TPMLPPTRPMEIVL--PLRKLRRIRLCEGGELLDRILAK 58
           IK+  G+T + N   M++LV T   P    M      P +    + L  GG+L   +   
Sbjct: 227 IKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL--S 284
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-D 117
           +   ++E D      +++      H   +V+RD+KP N L     E   ++ +D GL+ D
Sbjct: 285 QHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACD 341
Query: 118 FIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPF-WDKTED 173
           F K  KK    VG+  Y+APEVL++    +S  D +S+G + + LL G  PF   KT+D
Sbjct: 342 FSK--KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 398

>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol (Soak) Length = 688

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 55/179 (30%), Positives = 87/179 (48%), Gaps = 14/179 (7%)
Query: 2   IKILIGDTRSANCLDMVNLV-TPMLPPTRPMEIVL--PLRKLRRIRLCEGGELLDRILAK 58
           IK+  G+T + N   M++LV T   P    M      P +    + L  GG+L   +   
Sbjct: 226 IKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHL--S 283
Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-D 117
           +   ++E D      +++      H   +V+RD+KP N L     E   ++ +D GL+ D
Sbjct: 284 QHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DEHGHVRISDLGLACD 340
Query: 118 FIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPF-WDKTED 173
           F K  KK    VG+  Y+APEVL++    +S  D +S+G + + LL G  PF   KT+D
Sbjct: 341 FSK--KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKD 397

>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain Length = 306

Iteration: 1
 Score = 51.6 bits (122), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 79/186 (42%), Gaps = 24/186 (12%)
Query: 42  RIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 101
           ++  C+ G L   I  ++  +  +  A  +  Q+ +     H   L+HRD+KP N     
Sbjct: 112 QMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVD 171
Query: 102 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYIL 160
            K+   +K  DFGL   +K   K     G+  Y++PE +  +  G E D++++G+I   L
Sbjct: 172 TKQ---VKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 228
Query: 161 L--CG----RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 214
           L  C        F+    DGI  ++   K               K  ++KLL K P  R 
Sbjct: 229 LHVCDTAFETSKFFTDLRDGIISDIFDKKE--------------KTLLQKLLSKKPEDRP 274
Query: 215 TAAQAL 220
             ++ L
Sbjct: 275 NTSEIL 280

>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled Receptor Kinase 2 And Heterotrimeric G Protein Beta 1 And Gamma 2 Subunits Length = 689

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 68/133 (51%), Gaps = 11/133 (8%)
Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L  GG+L   +   +   ++E D      +++      H   +V+RD+KP N L     E
Sbjct: 273 LMNGGDLHYHL--SQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DE 327
Query: 105 DSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILL 161
              ++ +D GL+ DF K  KK    VG+  Y+APEVL++    +S  D +S+G + + LL
Sbjct: 328 HGHVRISDLGLACDFSK--KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
Query: 162 CGRRPF-WDKTED 173
            G  PF   KT+D
Sbjct: 386 RGHSPFRQHKTKD 398

>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits Length = 695

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 68/133 (51%), Gaps = 11/133 (8%)
Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L  GG+L   +   +   ++E D      +++      H   +V+RD+KP N L     E
Sbjct: 273 LMNGGDLHYHL--SQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILL---DE 327
Query: 105 DSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPES--DVWSIGVITYILL 161
              ++ +D GL+ DF K  KK    VG+  Y+APEVL++    +S  D +S+G + + LL
Sbjct: 328 HGHVRISDLGLACDFSK--KKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
Query: 162 CGRRPF-WDKTED 173
            G  PF   KT+D
Sbjct: 386 RGHSPFRQHKTKD 398

>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 81/207 (39%), Gaps = 50/207 (24%)
Query: 71  VVRQMLRVAAECHLHGLVHRDMKPENFL-FKSAKEDSSLKATDFGLSDF----IKPGKKF 125
           ++ Q+L      H + ++HRD+KP N L      E   +K  D G +      +KP    
Sbjct: 133 LLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADL 192
Query: 126 QDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGR-------------RPFWDK 170
             +V + +Y APE+L   R      D+W+IG I   LL                 P+   
Sbjct: 193 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHD 252
Query: 171 TEDGIFK----------EVLRNKP-------DFRRKPWPSIS-------------NSAKD 200
             D IF           E ++  P       DFRR  + + S             + A  
Sbjct: 253 QLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFH 312
Query: 201 FVKKLLVKDPRARLTAAQALSHPWVRE 227
            ++KLL  DP  R+T+ QA+  P+  E
Sbjct: 313 LLQKLLTMDPIKRITSEQAMQDPYFLE 339

>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide Length = 361

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 39/122 (31%), Positives = 54/122 (44%), Gaps = 33/122 (27%)
Query: 83  HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK----KF------------- 125
           H  G+VHRD+KP NFL+    +  +L   DFGL+      K    KF             
Sbjct: 134 HQFGIVHRDVKPSNFLYNRRLKKYAL--VDFGLAQGTHDTKIELLKFVQSEAQQERCSQN 191
Query: 126 ---------QDI---VGSAYYVAPEVLKRKSGPES--DVWSIGVITYILLCGRRPFWDKT 171
                    Q +    G+  + APEVL +     +  D+WS GVI   LL GR PF+  +
Sbjct: 192 KCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKAS 251
Query: 172 ED 173
           +D
Sbjct: 252 DD 253

>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain Length = 72

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 38/62 (61%)
Query: 270 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSE 329
           + +LRD F   D + +G IS  E+R+A+ K L  ++    + EI++ +D N DG VDF E
Sbjct: 6   VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 65
Query: 330 FV 331
           FV
Sbjct: 66  FV 67

>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory Dimer Length = 316

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 16/157 (10%)
Query: 78  VAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 134
           V A  HLH    ++HRD+KP N L  +  +   +K  DFG+S ++          G   Y
Sbjct: 146 VKALEHLHSKLSVIHRDVKPSNVLINALGQ---VKXCDFGISGYLVDDVAKDIDAGCKPY 202
Query: 135 VAPEVL-----KRKSGPESDVWSIGVITYILLCGRRPF--WDKTEDGIFKEVLRNKPDFR 187
            APE +     ++    +SD+WS+G+    L   R P+  W      + + V    P   
Sbjct: 203 XAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVEEPSPQL- 261
Query: 188 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 224
             P    S    DF  + L K+ + R T  +   HP+
Sbjct: 262 --PADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPF 296

>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 12/87 (13%)
Query: 83  HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD------IVGSAYYVA 136
           H +  +HRD+K  N L   A    + K +DFGL+   +  +KF        IVG+  Y+A
Sbjct: 150 HENHHIHRDIKSANILLDEA---FTAKISDFGLA---RASEKFAQTVMXSRIVGTTAYMA 203
Query: 137 PEVLKRKSGPESDVWSIGVITYILLCG 163
           PE L+ +  P+SD++S GV+   ++ G
Sbjct: 204 PEALRGEITPKSDIYSFGVVLLEIITG 230

>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4 Length = 307

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 12/87 (13%)
Query: 83  HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD------IVGSAYYVA 136
           H +  +HRD+K  N L   A    + K +DFGL+   +  +KF        IVG+  Y+A
Sbjct: 150 HENHHIHRDIKSANILLDEA---FTAKISDFGLA---RASEKFAQTVMXXRIVGTTAYMA 203
Query: 137 PEVLKRKSGPESDVWSIGVITYILLCG 163
           PE L+ +  P+SD++S GV+   ++ G
Sbjct: 204 PEALRGEITPKSDIYSFGVVLLEIITG 230

>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With Its Activating Protein Tab1 Length = 307

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 9/126 (7%)
Query: 47  EGGELLDRIL-AKKDSRYTEKDAAVVVRQMLRVAAECHL---HGLVHRDMKPENFLFKSA 102
           EGG L + +  A+    YT   A     Q  +  A  H      L+HRD+KP N L  + 
Sbjct: 82  EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAG 141
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPE-SDVWSIGVITYILL 161
              + LK  DFG +  I+      +  GSA ++APEV +  +  E  DV+S G+I + ++
Sbjct: 142 --GTVLKICDFGTACDIQ--THMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVI 197
Query: 162 CGRRPF 167
             R+PF
Sbjct: 198 TRRKPF 203

>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol Length = 315

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 62/126 (49%), Gaps = 9/126 (7%)
Query: 47  EGGELLDRIL-AKKDSRYTEKDAAVVVRQMLRVAAECHL---HGLVHRDMKPENFLFKSA 102
           EGG L + +  A+    YT   A     Q  +  A  H      L+HRD+KP N L  + 
Sbjct: 83  EGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAG 142
Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPE-SDVWSIGVITYILL 161
              + LK  DFG +  I+      +  GSA ++APEV +  +  E  DV+S G+I + ++
Sbjct: 143 --GTVLKICDFGTACDIQ--THMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVI 198
Query: 162 CGRRPF 167
             R+PF
Sbjct: 199 TRRKPF 204

>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form Length = 301

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 12/87 (13%)
Query: 83  HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD------IVGSAYYVA 136
           H +  +HRD+K  N L   A    + K +DFGL+   +  +KF        IVG+  Y+A
Sbjct: 144 HENHHIHRDIKSANILLDEA---FTAKISDFGLA---RASEKFAQXVMXXRIVGTTAYMA 197
Query: 137 PEVLKRKSGPESDVWSIGVITYILLCG 163
           PE L+ +  P+SD++S GV+   ++ G
Sbjct: 198 PEALRGEITPKSDIYSFGVVLLEIITG 224

>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp Length = 354

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 60/121 (49%), Gaps = 7/121 (5%)
Query: 49  GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC-HLHGLVHRDMKPENFLFKSAKEDSS 107
           G  LD++L K+  R  E+    V   +LR  A     H ++HRD+KP N L  S  E   
Sbjct: 98  GGSLDQVL-KEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGE--- 153
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRP 166
           +K  DFG+S  +         VG+  Y+APE L+      +SD+WS+G+    L  GR P
Sbjct: 154 IKLCDFGVSGQLIDSMA-NSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
Query: 167 F 167
Sbjct: 213 I 213

>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp Length = 328

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 54/231 (23%)
Query: 49  GELLDRILAKKDSRYTEK---DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
           G  LD++L KK  R  E+     ++ V + L    E   H ++HRD+KP N L  S  E 
Sbjct: 88  GGSLDQVL-KKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGE- 143
Query: 106 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGR 164
             +K  DFG+S  +         VG+  Y++PE L+      +SD+WS+G+    +  GR
Sbjct: 144 --IKLCDFGVSGQLIDSMA-NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
Query: 165 RP------------FWDKTED---------------------------GIFK--EVLRNK 183
            P            F  + E                             IF+  + + N+
Sbjct: 201 YPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNE 260
Query: 184 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 234
           P   + P    S   +DFV K L+K+P  R    Q + H +++   DA E+
Sbjct: 261 PP-PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR-SDAEEV 309

>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8) Length = 325

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 58/134 (43%), Gaps = 9/134 (6%)
Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           LD  L   D ++T      ++R +          G VHRD+   N L  S   +   K +
Sbjct: 137 LDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDS---NLVCKVS 193
Query: 112 DFGLSDFIK--PGKKFQDIVGSA--YYVAPEVLK-RKSGPESDVWSIGVITY-ILLCGRR 165
           DFGLS  ++  P        G     + APE +  R     SDVWS GV+ + +L  G R
Sbjct: 194 DFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGER 253
Query: 166 PFWDKTEDGIFKEV 179
           P+W+ T   +   V
Sbjct: 254 PYWNMTNRDVISSV 267

>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound Length = 322

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 54/231 (23%)
Query: 49  GELLDRILAKKDSRYTEK---DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
           G  LD++L KK  R  E+     ++ V + L    E   H ++HRD+KP N L  S  E 
Sbjct: 88  GGSLDQVL-KKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGE- 143
Query: 106 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGR 164
             +K  DFG+S  +         VG+  Y++PE L+      +SD+WS+G+    +  GR
Sbjct: 144 --IKLCDFGVSGQLIDSMA-NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
Query: 165 RP------------FWDKTED---------------------------GIFK--EVLRNK 183
            P            F  + E                             IF+  + + N+
Sbjct: 201 YPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNE 260
Query: 184 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 234
           P   + P    S   +DFV K L+K+P  R    Q + H +++   DA E+
Sbjct: 261 PP-PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR-SDAEEV 309

>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 333

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 54/231 (23%)
Query: 49  GELLDRILAKKDSRYTEK---DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
           G  LD++L KK  R  E+     ++ V + L    E   H ++HRD+KP N L  S  E 
Sbjct: 88  GGSLDQVL-KKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGE- 143
Query: 106 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGR 164
             +K  DFG+S  +         VG+  Y++PE L+      +SD+WS+G+    +  GR
Sbjct: 144 --IKLCDFGVSGQLIDSMA-NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
Query: 165 RP------------FWDKTED---------------------------GIFK--EVLRNK 183
            P            F  + E                             IF+  + + N+
Sbjct: 201 YPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNE 260
Query: 184 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 234
           P   + P    S   +DFV K L+K+P  R    Q + H +++   DA E+
Sbjct: 261 PP-PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR-SDAEEV 309

>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Complex With Ligand And Mgatp Length = 341

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 54/231 (23%)
Query: 49  GELLDRILAKKDSRYTEK---DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
           G  LD++L KK  R  E+     ++ V + L    E   H ++HRD+KP N L  S  E 
Sbjct: 88  GGSLDQVL-KKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGE- 143
Query: 106 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGR 164
             +K  DFG+S  +         VG+  Y++PE L+      +SD+WS+G+    +  GR
Sbjct: 144 --IKLCDFGVSGQLIDSMA-NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 200
Query: 165 RP------------FWDKTED---------------------------GIFK--EVLRNK 183
            P            F  + E                             IF+  + + N+
Sbjct: 201 YPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNE 260
Query: 184 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 234
           P   + P    S   +DFV K L+K+P  R    Q + H +++   DA E+
Sbjct: 261 PP-PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR-SDAEEV 309

>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer Length = 395

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 64/241 (26%), Positives = 101/241 (41%), Gaps = 59/241 (24%)
Query: 43  IRLC----EGGELLDRILAKKDSRYTEK---DAAVVVRQMLRVAAECHLHGLVHRDMKPE 95
           I +C    +GG L D++L KK  R  E+     ++ V + L    E   H ++HRD+KP 
Sbjct: 141 ISICMEHMDGGSL-DQVL-KKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPS 196
Query: 96  NFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIG 154
           N L  S  E   +K  DFG+S  +         VG+  Y++PE L+      +SD+WS+G
Sbjct: 197 NILVNSRGE---IKLCDFGVSGQLIDSMA-NSFVGTRSYMSPERLQGTHYSVQSDIWSMG 252
Query: 155 VITYILLCGRRP------------FWDKTED---------------------------GI 175
           +    +  GR P            F  + E                             I
Sbjct: 253 LSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAI 312
Query: 176 FK--EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 233
           F+  + + N+P   + P    S   +DFV K L+K+P  R    Q + H +++   DA E
Sbjct: 313 FELLDYIVNEPP-PKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR-SDAEE 370
Query: 234 I 234
           +
Sbjct: 371 V 371

>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In A Ternary Complex With Compound 1, Atp-Gs And Mg2p Length = 360

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 61/231 (26%), Positives = 96/231 (41%), Gaps = 54/231 (23%)
Query: 49  GELLDRILAKKDSRYTEK---DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
           G  LD++L KK  R  E+     ++ V + L    E   H ++HRD+KP N L  S  E 
Sbjct: 115 GGSLDQVL-KKAGRIPEQILGKVSIAVIKGLTYLRE--KHKIMHRDVKPSNILVNSRGE- 170
Query: 106 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGR 164
             +K  DFG+S  +         VG+  Y++PE L+      +SD+WS+G+    +  GR
Sbjct: 171 --IKLCDFGVSGQLIDSMA-NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGR 227
Query: 165 RP------------FWDKTED---------------------------GIFK--EVLRNK 183
            P            F  + E                             IF+  + + N+
Sbjct: 228 YPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNE 287
Query: 184 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 234
           P   + P    S   +DFV K L+K+P  R    Q + H +++   DA E+
Sbjct: 288 PP-PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR-SDAEEV 336

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 71  VVRQMLRVAAEC----HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 126
           +VR+      +C    H + ++H D+KPEN L K  +  S +K  DFG S +    ++  
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQ-QGRSGIKVIDFGSSCY--EHQRVY 257
Query: 127 DIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCG 163
             + S +Y APEV L  + G   D+WS+G I   LL G
Sbjct: 258 TXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 71  VVRQMLRVAAEC----HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 126
           +VR+      +C    H + ++H D+KPEN L K  +  S +K  DFG S +    ++  
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQ-QGRSGIKVIDFGSSCY--EHQRVY 257
Query: 127 DIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCG 163
             + S +Y APEV L  + G   D+WS+G I   LL G
Sbjct: 258 TXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295

>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain Length = 298

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 12/87 (13%)
Query: 83  HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD------IVGSAYYVA 136
           H +  +HRD+K  N L   A    + K +DFGL+   +  +KF        IVG+  Y A
Sbjct: 141 HENHHIHRDIKSANILLDEA---FTAKISDFGLA---RASEKFAQXVXXSRIVGTTAYXA 194
Query: 137 PEVLKRKSGPESDVWSIGVITYILLCG 163
           PE L+ +  P+SD++S GV+   ++ G
Sbjct: 195 PEALRGEITPKSDIYSFGVVLLEIITG 221

>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta At 2.4 Angstroms Length = 193

Iteration: 1
 Score = 49.7 bits (117), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/138 (23%), Positives = 61/138 (44%), Gaps = 24/138 (17%)
Query: 285 NGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD 344
           +G +S+EE ++      P+         + +  D N DG +DF EF+ A     + +   
Sbjct: 40  SGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQ 99
Query: 345 SEKWHLRSQAAFEKFDIDRDGFITPEEL--------RMHTGL----------KGSIDPLL 386
             KW      AF  +D+D +G+I+  E+        +M + +          +   + + 
Sbjct: 100 KLKW------AFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIF 153
Query: 387 EEADIDKDGRISLSEFRR 404
            + D ++DG++SL EF R
Sbjct: 154 RQMDTNRDGKLSLEEFIR 171

>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7 Length = 310

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 11/137 (8%)
Query: 83  HLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP-GKKFQDIVGSAYYVAPE- 138
           H+H   ++HRD+KP N    +      +K  D GL  F          +VG+ YY++PE 
Sbjct: 151 HMHSRRVMHRDIKPANVFITAT---GVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPER 207
Query: 139 VLKRKSGPESDVWSIGVITYILLCGRRPFWDKTED--GIFKEVLRNKPDFRRKPWPSISN 196
           + +     +SD+WS+G + Y +   + PF+    +   + K++   + D+   P    S 
Sbjct: 208 IHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKI--EQCDYPPLPSDHYSE 265
Query: 197 SAKDFVKKLLVKDPRAR 213
             +  V   +  DP  R
Sbjct: 266 ELRQLVNMCINPDPEKR 282

>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429

Iteration: 1
 Score = 49.3 bits (116), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 34/98 (34%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 71  VVRQMLRVAAEC----HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 126
           +VR+      +C    H + ++H D+KPEN L K  +  S +K  DFG S +    ++  
Sbjct: 201 LVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQ-QGRSGIKVIDFGSSCY--EHQRVY 257
Query: 127 DIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCG 163
             + S +Y APEV L  + G   D+WS+G I   LL G
Sbjct: 258 XXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTG 295

>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed With Compound 16 Length = 271

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 7/87 (8%)
Query: 87  LVHRDMKPENFLFKSAKEDSSL-----KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK 141
           ++HRD+K  N L     E+  L     K TDFGL+       K     G+  ++APEV++
Sbjct: 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSA-AGAYAWMAPEVIR 187
Query: 142 RKSGPE-SDVWSIGVITYILLCGRRPF 167
                + SDVWS GV+ + LL G  PF
Sbjct: 188 ASMFSKGSDVWSYGVLLWELLTGEVPF 214

>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An Atp Competitive Inhibitor, Ic261 Length = 298

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 11/130 (8%)
Query: 49  GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK--SAKEDS 106
           G  L+ +L     +++ K  A+  +QML      H   LV+RD+KP+NFL    ++K  +
Sbjct: 89  GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNAN 148
Query: 107 SLKATDFGLSDFIK--------PGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVIT 157
            +   DFG+  F +        P ++ +++ G+A Y++    L R+     D+ ++G + 
Sbjct: 149 MIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVF 208
Query: 158 YILLCGRRPF 167
              L G  P+
Sbjct: 209 MYFLRGSLPW 218

>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7 Length = 297

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 34/130 (26%), Positives = 64/130 (49%), Gaps = 11/130 (8%)
Query: 49  GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK--SAKEDS 106
           G  L+ +L     +++ K  A+  +QML      H   LV+RD+KP+NFL    ++K  +
Sbjct: 88  GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNAN 147
Query: 107 SLKATDFGLSDFIK--------PGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVIT 157
            +   DFG+  F +        P ++ +++ G+A Y++    L R+     D+ ++G + 
Sbjct: 148 MIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVF 207
Query: 158 YILLCGRRPF 167
              L G  P+
Sbjct: 208 MYFLRGSLPW 217

>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex. Length = 284

Iteration: 1
 Score = 48.1 bits (113), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 79/186 (42%), Gaps = 24/186 (12%)
Query: 42  RIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 101
           ++  C+ G L   I  ++  +  +  A  +  Q+ +     H   L++RD+KP N     
Sbjct: 98  QMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVD 157
Query: 102 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYIL 160
            K+   +K  DFGL   +K   K     G+  Y++PE +  +  G E D++++G+I   L
Sbjct: 158 TKQ---VKIGDFGLVTSLKNDGKRXRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAEL 214
Query: 161 L--CG----RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 214
           L  C        F+    DGI  ++   K               K  ++KLL K P  R 
Sbjct: 215 LHVCDTAFETSKFFTDLRDGIISDIFDKKE--------------KTLLQKLLSKKPEDRP 260
Query: 215 TAAQAL 220
             ++ L
Sbjct: 261 NTSEIL 266

>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2) Length = 368

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 84/210 (40%), Gaps = 63/210 (30%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSA-----------KEDSSLKAT-----DFGLSD 117
           Q+ +     H + L H D+KPEN LF ++           +++ S+K+T     DFG + 
Sbjct: 145 QLCQAVKFLHDNKLTHTDLKPENILFVNSDYELTYNLEKKRDERSVKSTAVRVVDFGSAT 204
Query: 118 FIKPGKKFQDIVGSAYYVAPEVLKRKSGPE-SDVWSIGVITYILLCGRRPFWDKTEDG-- 174
           F    +    IV + +Y APEV+      +  DVWSIG I +    G   F  +T D   
Sbjct: 205 F--DHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLF--QTHDNRE 260
Query: 175 ---------------IFKEVLRNKPDFR-RKPWPSISNSAK------------------- 199
                          + ++  + K  +R R  W   +++ +                   
Sbjct: 261 HLAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKPLRRYLTSEAEE 320
Query: 200 -----DFVKKLLVKDPRARLTAAQALSHPW 224
                D ++ +L  +P  RLT  +AL HP+
Sbjct: 321 HHQLFDLIESMLEYEPAKRLTLGEALQHPF 350

>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n Inactivating Mutant In Apo Form Length = 303

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 84/202 (41%), Gaps = 33/202 (16%)
Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
           CE   L D I ++  ++    +   + RQ+L   +  H  G++HR++KP N       E 
Sbjct: 97  CENRTLYDLIHSENLNQ-QRDEYWRLFRQILEALSYIHSQGIIHRNLKPXNIFI---DES 152
Query: 106 SSLKATDFGLS-------DFIK------PGK--KFQDIVGSAYYVAPEVLKRKS--GPES 148
            ++K  DFGL+       D +K      PG        +G+A YVA EVL        + 
Sbjct: 153 RNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKI 212
Query: 149 DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN-----KPDFRRKPWPSISNSAKDFVK 203
           D +S+G+I +  +    PF    E     + LR+      PDF            K  ++
Sbjct: 213 DXYSLGIIFFEXIY---PFSTGXERVNILKKLRSVSIEFPPDFDDNK----XKVEKKIIR 265
Query: 204 KLLVKDPRARLTAAQALSHPWV 225
            L+  DP  R  A   L+  W+
Sbjct: 266 LLIDHDPNKRPGARTLLNSGWL 287

>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C Terminal Domain Length = 71

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 6/60 (10%)
Query: 353 QAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLL 406
           Q AF  FD D DG IT +ELR      G       +D ++ EAD+D+DGR++  EF R+L
Sbjct: 9   QVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARML 68

>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1 Structure Length = 161

Iteration: 1
 Score = 47.0 bits (110), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 284 KNGSISLEE----MRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 339
           ++GSIS +E    MR       P +L+E     ++  +D +  G VDF EF+   + V  
Sbjct: 32  EDGSISTKELGKVMRMLGQNPTPEELQE-----MIDEVDEDGSGTVDFDEFLV--MMVRS 84
Query: 340 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDK 393
           +++    K        F  FD + DG+I  EEL++     G       I+ L+++ D + 
Sbjct: 85  MKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNN 144
Query: 394 DGRISLSEFRRLLR 407
           DGRI   EF   ++
Sbjct: 145 DGRIDYDEFLEFMK 158

>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac Troponin C Complexed With The Calcium Sensitizer Bepridil At 2.15 A Resolution Length = 161

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 284 KNGSISLEE----MRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 339
           ++GSIS +E    MR       P +L+E     ++  +D +  G VDF EF+   + V  
Sbjct: 32  EDGSISTKELGKVMRMLGQNPTPEELQE-----MIDEVDEDGSGTVDFDEFLV--MMVRS 84
Query: 340 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDK 393
           +++    K        F  FD + DG+I  EEL++     G       I+ L+++ D + 
Sbjct: 85  MKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNN 144
Query: 394 DGRISLSEFRRLLR 407
           DGRI   EF   ++
Sbjct: 145 DGRIDYDEFLEFMK 158

>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092, Delete A660- T867) At 2.28 A Resolution Length = 299

Iteration: 1
 Score = 46.6 bits (109), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 60/125 (48%), Gaps = 23/125 (18%)
Query: 65  EKDAAVVVRQMLRVAAEC---HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 121
           E++ +V +   L++A      H  GL+HRD+KP N  F     D  +K  DFGL   +  
Sbjct: 114 ERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTM---DDVVKVGDFGLVTAMDQ 170
Query: 122 GKKFQDI-------------VGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPF 167
            ++ Q +             VG+  Y++PE +   S   + D++S+G+I + LL    PF
Sbjct: 171 DEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL---YPF 227
Query: 168 WDKTE 172
             + E
Sbjct: 228 STQME 232

>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis SerineTHREONINE Kinase, Pkne Length = 309

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 6/103 (5%)
Query: 68  AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ- 126
           A  +VRQ+       H  G  HRD+KPEN L  +   D      DFG++      K  Q 
Sbjct: 136 AVAIVRQIGSALDAAHAAGATHRDVKPENILVSA---DDFAYLVDFGIASATTDEKLTQL 192
Query: 127 -DIVGSAYYVAPEVLKRKSGP-ESDVWSIGVITYILLCGRRPF 167
            + VG+ YY APE          +D++++  + Y  L G  P+
Sbjct: 193 GNTVGTLYYXAPERFSESHATYRADIYALTCVLYECLTGSPPY 235

>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From Entamoeba Histolytica: A Novel Arrangement Of Ef Hand Motifs Length = 134

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 37/130 (28%), Positives = 70/130 (53%), Gaps = 10/130 (7%)
Query: 277 FDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLE-ILQAIDCNTDGLVDFSEFVAATL 335
           F  IDV+ +G++S EE++  ++K     +K  ++L+ I ++ID + +G +D +EF     
Sbjct: 6   FKEIDVNGDGAVSYEEVKAFVSKKR--AIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG 63
Query: 336 HVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEE---ADID 392
            +   +  D +   +  +  ++  D+D DG +T EE+       G I+ + E+   AD +
Sbjct: 64  SIQGQDLSDDK---IGLKVLYKLMDVDGDGKLTKEEVTSFFKKHG-IEKVAEQVMKADAN 119
Query: 393 KDGRISLSEF 402
            DG I+L EF
Sbjct: 120 GDGYITLEEF 129

>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In Complex With Staurosporine Length = 310

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/124 (27%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 49  GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 108
           G  L  I+   DS+Y         + +    A  H   ++HRD+   N L    +E+ ++
Sbjct: 91  GGTLRGIIKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCL---VRENKNV 147
Query: 109 KATDFGLSDFI--------------KPG-KKFQDIVGSAYYVAPEVLKRKSGPES-DVWS 152
              DFGL+  +              KP  KK   +VG+ Y++APE++  +S  E  DV+S
Sbjct: 148 VVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFS 207
Query: 153 IGVI 156
            G++
Sbjct: 208 FGIV 211

>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding Protein From Entamoeba Histolytica Length = 134

Iteration: 1
 Score = 46.2 bits (108), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 37/130 (28%), Positives = 70/130 (53%), Gaps = 10/130 (7%)
Query: 277 FDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLE-ILQAIDCNTDGLVDFSEFVAATL 335
           F  IDV+ +G++S EE++  ++K     +K  ++L+ I ++ID + +G +D +EF     
Sbjct: 6   FKEIDVNGDGAVSYEEVKAFVSKKR--AIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG 63
Query: 336 HVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEE---ADID 392
            +   +  D +   +  +  ++  D+D DG +T EE+       G I+ + E+   AD +
Sbjct: 64  SIQGQDLSDDK---IGLKVLYKLMDVDGDGKLTKEEVTSFFKKHG-IEKVAEQVMKADAN 119
Query: 393 KDGRISLSEF 402
            DG I+L EF
Sbjct: 120 GDGYITLEEF 129

>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6 Length = 302

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 70  VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---- 125
           +  +Q+    A  H    +HR++   N L  +   D  +K  DFGL+  +  G ++    
Sbjct: 121 LFAQQICEGMAYLHAQHYIHRNLAARNVLLDN---DRLVKIGDFGLAKAVPEGHEYYRVR 177
Query: 126 QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILL 161
           +D     ++ APE LK  K    SDVWS GV  Y LL
Sbjct: 178 EDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 78/187 (41%), Gaps = 37/187 (19%)
Query: 83  HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 142
           H  G+VHRD+ P N L     +++ +   DF L+            V   +Y APE++ +
Sbjct: 151 HEAGVVHRDLHPGNILLA---DNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQ 207
Query: 143 KSGPES--DVWSIGVITYILLCGR-----RPFWD------------KTEDGIF------K 177
             G     D+WS G +   +   +       F++            K ED +       +
Sbjct: 208 FKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSAR 267
Query: 178 EVLRNK-PDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 232
           + LRN   +   + W    P+    A D + K+L  +P+ R++  QAL HP+     D  
Sbjct: 268 DYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLFD-- 325
Query: 233 EIPIDIS 239
             P+D++
Sbjct: 326 --PLDLT 330

>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase (gak) Length = 337

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 50/200 (25%), Positives = 80/200 (40%), Gaps = 38/200 (19%)
Query: 45  LCEGGELLDRILAKKDSRYTEKDAAV--VVRQMLRVAAECHLHG--LVHRDMKPENFLFK 100
           LC+G   L   L K +SR       V  +  Q  R     H     ++HRD+K EN L  
Sbjct: 115 LCKG--QLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLS 172
Query: 101 SAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----------------YYVAPEVLKRKS 144
           +     ++K  DFG +  I     + D   SA                 Y  PE++   S
Sbjct: 173 N---QGTIKLCDFGSATTIS---HYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYS 226
Query: 145 ----GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKD 200
               G + D+W++G I Y+L   + PF    EDG    ++  K  +   P  +       
Sbjct: 227 NFPIGEKQDIWALGCILYLLCFRQHPF----EDGAKLRIVNGK--YSIPPHDTQYTVFHS 280
Query: 201 FVKKLLVKDPRARLTAAQAL 220
            ++ +L  +P  RL+ A+ +
Sbjct: 281 LIRAMLQVNPEERLSIAEVV 300

>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex With Amp-Pnp Length = 344

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 85  HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK 141
           HG+VHR++   N L KS    S ++  DFG++D + P  K   + +      ++A E + 
Sbjct: 152 HGMVHRNLAARNVLLKSP---SQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIH 208
Query: 142 -RKSGPESDVWSIGVITYILLC-GRRPF 167
             K   +SDVWS GV  + L+  G  P+
Sbjct: 209 FGKYTHQSDVWSYGVTVWELMTFGAEPY 236

>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And Integrin-Binding Protein) Length = 183

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 15/78 (19%)
Query: 344 DSEKWHLRSQAAFEKFDIDRDGFITPEEL-RMHTGLKGS--------------IDPLLEE 388
           D+    ++S  AF  FD D DG +  E+L R+   L G               ID +LEE
Sbjct: 92  DTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEE 151
Query: 389 ADIDKDGRISLSEFRRLL 406
           +DID+DG I+LSEF+ ++
Sbjct: 152 SDIDRDGTINLSEFQHVI 169

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/187 (24%), Positives = 78/187 (41%), Gaps = 37/187 (19%)
Query: 83  HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR 142
           H  G+VHRD+ P N L     +++ +   DF L+            V   +Y APE++ +
Sbjct: 151 HEAGVVHRDLHPGNILLA---DNNDITICDFNLAREDTADANKTHYVTHRWYRAPELVMQ 207
Query: 143 KSGPES--DVWSIGVITYILLCGR-----RPFWD------------KTEDGIF------K 177
             G     D+WS G +   +   +       F++            K ED +       +
Sbjct: 208 FKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSAR 267
Query: 178 EVLRNK-PDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS 232
           + LRN   +   + W    P+    A D + K+L  +P+ R++  QAL HP+     D  
Sbjct: 268 DYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLFD-- 325
Query: 233 EIPIDIS 239
             P+D++
Sbjct: 326 --PLDLT 330

>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1 Length = 214

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 15/78 (19%)
Query: 344 DSEKWHLRSQAAFEKFDIDRDGFITPEEL-RMHTGLKGS--------------IDPLLEE 388
           D+    ++S  AF  FD D DG +  E+L R+   L G               ID +LEE
Sbjct: 123 DTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEE 182
Query: 389 ADIDKDGRISLSEFRRLL 406
           +DID+DG I+LSEF+ ++
Sbjct: 183 SDIDRDGTINLSEFQHVI 200

>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With 2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9- Isopropylpurine (Casp Target) Length = 310

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 65/140 (46%), Gaps = 12/140 (8%)
Query: 60  DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF--KSAKEDSSLKATDFGLS- 116
           D  +T K   ++  Q+L      H   L++RD+KPENFL   +  K++  +   DFGL+ 
Sbjct: 91  DRTFTLKTVLMIAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLAK 150
Query: 117 DFIKPGKK-------FQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPFW 168
           ++I P  K        + + G+A Y++    L ++     D+ ++G +    L G  P W
Sbjct: 151 EYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLP-W 209
Query: 169 DKTEDGIFKEVLRNKPDFRR 188
              +    KE  +   D +R
Sbjct: 210 QGLKADTLKERYQKIGDTKR 229

>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase Domain Of The Human Epidermal Growth Factor Receptor 3 (Her3) Length = 325

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 8/88 (9%)
Query: 85  HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK 141
           HG+VHR++   N L KS    S ++  DFG++D + P  K   + +      ++A E + 
Sbjct: 134 HGMVHRNLAARNVLLKSP---SQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIH 190
Query: 142 -RKSGPESDVWSIGVITYILLC-GRRPF 167
             K   +SDVWS GV  + L+  G  P+
Sbjct: 191 FGKYTHQSDVWSYGVTVWELMTFGAEPY 218

>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding Region In Nhe1 And Insights Into The Mechanism Of Ph Regulation Length = 202

Iteration: 1
 Score = 45.4 bits (106), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 31/166 (18%)
Query: 273 LRDQFDAIDVDKNGSISLEEMRQ--ALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEF 330
           L  +F A+D +K G +S  +++Q  ALA + P   +      I+++   +    VDF  F
Sbjct: 31  LHHRFRALDRNKKGYLSRMDLQQIGALAVN-PLGDR------IIESFFPDGSQRVDFPGF 83
Query: 331 VAATLHVHQLEEHDSEKWHLRS-----------QAAFEKFDIDRDGFITPEE----LRMH 375
           V    H   +E+ D+E    +              AF+ +D+DRDG I+  E    LR+ 
Sbjct: 84  VRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLM 143
Query: 376 TG-------LKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISSR 414
            G       L+   D  ++EAD D DG +S  EF + L    +  +
Sbjct: 144 VGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEKMDVEQK 189

>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman Length = 100

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Composition-based stats.
 Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           + ++EL ++R+ F   D D NG IS +E+  A+ + L +   E  +  I+Q +D + DG 
Sbjct: 30  IPEDELEEIREAFKVFDRDGNGFISKQELGTAM-RSLGYMPNEVELEVIIQRLDMDGDGQ 88
Query: 325 VDFSEFV 331
           VDF EFV
Sbjct: 89  VDFEEFV 95

>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K659n Mutation Responsible For An Unclassified Craniosynostosis Syndrome. Length = 324

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 58/136 (42%), Gaps = 8/136 (5%)
Query: 37  LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 96
           LR+  R R   G E    I    + + T KD      Q+ R          +HRD+   N
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARN 187
Query: 97  FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS---AYYVAPEVL-KRKSGPESDVWS 152
            L     E++ +K  DFGL+  I     +++         ++APE L  R    +SDVWS
Sbjct: 188 VL---VTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWS 244
Query: 153 IGVITY-ILLCGRRPF 167
            GV+ + I   G  P+
Sbjct: 245 FGVLMWEIFTLGGSPY 260

>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein Complex Length = 172

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 42/153 (27%), Positives = 79/153 (51%), Gaps = 12/153 (7%)
Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           L +E+  ++R+ FD  D D  G+I ++E++ A  + L ++ K+  + + +  ID    G 
Sbjct: 25  LTEEQKQEIREAFDLFDADGTGTIDVKELKVA-XRALGFEPKKEEIKKXISEIDKEGTGK 83
Query: 325 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG---- 380
            +F +F+  T+   +  E D+++  L+   AF+ FD D  G I+ + L+      G    
Sbjct: 84  XNFGDFL--TVXTQKXSEKDTKEEILK---AFKLFDDDETGKISFKNLKRVAKELGENLT 138
Query: 381 --SIDPLLEEADIDKDGRISLSEFRRLLRTASI 411
              +   ++EAD D DG +S  EF R+ +  S+
Sbjct: 139 DEELQEXIDEADRDGDGEVSEQEFLRIXKKTSL 171

>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With Quinoline-Thiadiazole- Thiophene Inhibitor Length = 302

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 8/97 (8%)
Query: 70  VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---- 125
           +  +Q+    A  H    +HR++   N L  +   D  +K  DFGL+  +  G ++    
Sbjct: 121 LFAQQICEGMAYLHSQHYIHRNLAARNVLLDN---DRLVKIGDFGLAKAVPEGHEYYRVR 177
Query: 126 QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILL 161
           +D     ++ APE LK  K    SDVWS GV  Y LL
Sbjct: 178 EDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 214

>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick Smooth Muscle Myosin With Regulatory Light Chain In Phosphorylated State Length = 143

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 16/152 (10%)
Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
            D  ++ + ++ F+ ID +++G I  E++   LA      + ++   E L+ +     G 
Sbjct: 1   FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS-----MGKNPTDEYLEGMMSEAPGP 55
Query: 325 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG---- 380
           ++F+ F+  T+   +L   D E   +R+  AF  FD +  GFI  + LR      G    
Sbjct: 56  INFTMFL--TMFGEKLNGTDPEDV-IRN--AFACFDEEASGFIHEDHLRELLTTMGDRFT 110
Query: 381 --SIDPLLEEADIDKDGRISLSEFRRLLRTAS 410
              +D +  EA IDK G  +  EF R+L+  +
Sbjct: 111 DEEVDEMYREAPIDKKGNFNYVEFTRILKHGA 142

>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating Protein-3 Length = 211

Iteration: 1
 Score = 45.1 bits (105), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 31/103 (30%), Positives = 46/103 (44%), Gaps = 18/103 (17%)
Query: 312 EILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE 371
           ++    D N DG VDF EF+AA   + Q +     KW+      F+ +D D +G I   E
Sbjct: 61  QVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKWY------FKLYDADGNGSIDKNE 114
Query: 372 L----RMHTGLKGS--------IDPLLEEADIDKDGRISLSEF 402
           L         L G         I+ +  + DI+ DG ++L EF
Sbjct: 115 LLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEF 157

>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From Mycobacterium Tuberculosis In Complex With Tetrahydrobenzothiophene Ax20017 Length = 681

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 75/176 (42%), Gaps = 24/176 (13%)
Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG+ L R    K  +    +A   + ++L   +  H  GLV+ D+KPEN +      +  
Sbjct: 167 GGQSLKR---SKGQKLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLT----EEQ 219
Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPF 167
           LK  D G    I     F  + G+  + APE+++      +D++++G     L       
Sbjct: 220 LKLIDLGAVSRI---NSFGYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTR 276
Query: 168 WDKTEDGIFKE--VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 221
             +  DG+ ++  VL+    + R             +++ +  DPR R T A+ +S
Sbjct: 277 NGRYVDGLPEDDPVLKTYDSYGR------------LLRRAIDPDPRQRFTTAEEMS 320

>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2 And Jak3 Kinase Domains In Complex With Cp-690550 And Cmp-6 Length = 318

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 70  VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---- 125
           +  +Q+    A  H    +HRD+   N L  +   D  +K  DFGL+  +  G +     
Sbjct: 138 LFAQQICEGMAYLHAQHYIHRDLAARNVLLDN---DRLVKIGDFGLAKAVPEGHEXYRVR 194
Query: 126 QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILL 161
           +D     ++ APE LK  K    SDVWS GV  Y LL
Sbjct: 195 EDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELL 231

>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains Trapped In Trans-Phosphorylation Reaction Length = 334

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 59/136 (43%), Gaps = 8/136 (5%)
Query: 37  LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 96
           LR+  R R   G E    I    + + T KD      Q+ R          +HRD+   N
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARN 187
Query: 97  FLFKSAKEDSSLKATDFGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWS 152
            L     E++ +K  DFGL+   + I   KK  +      ++APE L  R    +SDVWS
Sbjct: 188 VL---VTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 244
Query: 153 IGVITY-ILLCGRRPF 167
            GV+ + I   G  P+
Sbjct: 245 FGVLMWEIFTLGGSPY 260

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/121 (28%), Positives = 50/121 (41%), Gaps = 31/121 (25%)
Query: 64  TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK--- 120
           TE+    ++  +L      H  G++HRD+KP N L     +D S+K  DFGL+  I    
Sbjct: 129 TEQHVKTILYNLLLGEKFIHESGIIHRDLKPANCLL---NQDCSVKICDFGLARTINSDK 185
Query: 121 ----------------PG-------KKFQDIVGSAYYVAPE--VLKRKSGPESDVWSIGV 155
                           PG       K+    V + +Y APE  +L+       D+WS G 
Sbjct: 186 DIHIVNDLEEKEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGC 245
Query: 156 I 156
           I
Sbjct: 246 I 246

>pdb|2EU9|A Chain A, Crystal Structure Of Clk3 Length = 355

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 19/93 (20%)
Query: 83  HLHGLVHRDMKPENFLF------------KSAKE----DSSLKATDFGLSDFIKPGKKFQ 126
           H + L H D+KPEN LF            KS +E    ++S++  DFG + F    +   
Sbjct: 140 HENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF--DHEHHT 197
Query: 127 DIVGSAYYVAPEV-LKRKSGPESDVWSIGVITY 158
            IV + +Y  PEV L+       DVWSIG I +
Sbjct: 198 TIVATRHYRPPEVILELGWAQPCDVWSIGCILF 230

>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With Bound Adp Length = 373

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 50/199 (25%)
Query: 86  GLVHRDMKPENFLFKSAKEDSSL---KATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LK 141
           G++H D+KPEN L +      +L   K  D G + +    + + + + +  Y +PEV L 
Sbjct: 152 GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD--EHYTNSIQTREYRSPEVLLG 209
Query: 142 RKSGPESDVWSIGVITYILLCGRRPF-------WDKTEDGIFK--EVLRNKPDF------ 186
              G  +D+WS   + + L+ G   F       + K +D I +  E+L   P +      
Sbjct: 210 APWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGK 269
Query: 187 ----------------RRKPWP-------------SISNSAKDFVKKLLVKDPRARLTAA 217
                           + K WP               +    DF+  +L  DPR R  A 
Sbjct: 270 YTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG 329
Query: 218 QALSHPWVREGGDASEIPI 236
             ++HPW+++     EI +
Sbjct: 330 GLVNHPWLKDTLGMEEIRV 348

>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase In Yeast Length = 373

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/199 (23%), Positives = 79/199 (39%), Gaps = 50/199 (25%)
Query: 86  GLVHRDMKPENFLFKSAKEDSSL---KATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LK 141
           G++H D+KPEN L +      +L   K  D G + +    + + + + +  Y +PEV L 
Sbjct: 152 GIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYD--EHYTNSIQTREYRSPEVLLG 209
Query: 142 RKSGPESDVWSIGVITYILLCGRRPF-------WDKTEDGIFK--EVLRNKPDF------ 186
              G  +D+WS   + + L+ G   F       + K +D I +  E+L   P +      
Sbjct: 210 APWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGK 269
Query: 187 ----------------RRKPWP-------------SISNSAKDFVKKLLVKDPRARLTAA 217
                           + K WP               +    DF+  +L  DPR R  A 
Sbjct: 270 YTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAG 329
Query: 218 QALSHPWVREGGDASEIPI 236
             ++HPW+++     EI +
Sbjct: 330 GLVNHPWLKDTLGMEEIRV 348

>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3 Length = 357

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 19/93 (20%)
Query: 83  HLHGLVHRDMKPENFLF------------KSAKE----DSSLKATDFGLSDFIKPGKKFQ 126
           H + L H D+KPEN LF            KS +E    ++S++  DFG + F    +   
Sbjct: 149 HENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF--DHEHHT 206
Query: 127 DIVGSAYYVAPEV-LKRKSGPESDVWSIGVITY 158
            IV + +Y  PEV L+       DVWSIG I +
Sbjct: 207 TIVATRHYRPPEVILELGWAQPCDVWSIGCILF 239

>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp Analog And Substrate Peptide Length = 334

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 59/136 (43%), Gaps = 8/136 (5%)
Query: 37  LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 96
           LR+  R R   G E    I    + + T KD      Q+ R          +HRD+   N
Sbjct: 128 LREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARN 187
Query: 97  FLFKSAKEDSSLKATDFGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWS 152
            L     E++ +K  DFGL+   + I   KK  +      ++APE L  R    +SDVWS
Sbjct: 188 VL---VTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 244
Query: 153 IGVITY-ILLCGRRPF 167
            GV+ + I   G  P+
Sbjct: 245 FGVLMWEIFTLGGSPY 260

>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki Length = 381

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 19/93 (20%)
Query: 83  HLHGLVHRDMKPENFLF------------KSAKE----DSSLKATDFGLSDFIKPGKKFQ 126
           H + L H D+KPEN LF            KS +E    ++S++  DFG + F    +   
Sbjct: 172 HENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATF--DHEHHT 229
Query: 127 DIVGSAYYVAPEV-LKRKSGPESDVWSIGVITY 158
            IV + +Y  PEV L+       DVWSIG I +
Sbjct: 230 TIVATRHYRPPEVILELGWAQPCDVWSIGCILF 262

>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 291

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 70  VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---- 125
           +  +Q+    A  H    +HR +   N L  +   D  +K  DFGL+  +  G ++    
Sbjct: 116 LFAQQICEGMAYLHAQHYIHRALAARNVLLDN---DRLVKIGDFGLAKAVPEGHEYYRVR 172
Query: 126 QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILL 161
           +D     ++ APE LK  K    SDVWS GV  Y LL
Sbjct: 173 EDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 209

>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2 Length = 313

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/151 (25%), Positives = 67/151 (44%), Gaps = 12/151 (7%)
Query: 49  GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFK--SAKEDS 106
           G  L+ +    D  +T K   ++  Q++      H   L++RD+KPENFL      K   
Sbjct: 83  GPSLEDLFDLCDRTFTLKTVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQH 142
Query: 107 SLKATDFGLS-DFIKPGKK-------FQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVIT 157
           ++   DFGL+ ++I P  K        + + G+A Y++    L ++     D+ ++G + 
Sbjct: 143 AIHIIDFGLAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMF 202
Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRR 188
              L G  P W   +    KE  +   D +R
Sbjct: 203 MYFLRGSLP-WQGLKADTLKERYQKIGDTKR 232

>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole Inhibitor Length = 290

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 8/97 (8%)
Query: 70  VVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---- 125
           +  +Q+    A  H    +HR +   N L  +   D  +K  DFGL+  +  G ++    
Sbjct: 115 LFAQQICEGMAYLHAQHYIHRALAARNVLLDN---DRLVKIGDFGLAKAVPEGHEYYRVR 171
Query: 126 QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILL 161
           +D     ++ APE LK  K    SDVWS GV  Y LL
Sbjct: 172 EDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELL 208

>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin Length = 330

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 91/218 (41%), Gaps = 64/218 (29%)
Query: 47  EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE-CHLH----------GLVHRDMKPE 95
           E G L D +      + T  D    +R +L +A+   HLH           + HRD+K +
Sbjct: 118 EMGSLYDYL------QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSK 171
Query: 96  NFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI-----VGSAYYVAPEVLKRK------- 143
           N L    K++      D GL+          D+     VG+  Y+APEVL          
Sbjct: 172 NIL---VKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFD 228
Query: 144 SGPESDVWSIGVITYILLCGRRPFWDKTEDGI-------FKEVLRNKPDF---------- 186
           S    D+W+ G++ + +   RR       +GI       F +V+ N P F          
Sbjct: 229 SYKRVDIWAFGLVLWEV--ARR----MVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVD 282
Query: 187 RRKP-----W---PSISNSAKDFVKKLLVKDPRARLTA 216
           +++P     W   P++++ AK  +K+   ++P ARLTA
Sbjct: 283 QQRPNIPNRWFSDPTLTSLAK-LMKECWYQNPSARLTA 319

>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex With The Imidazo[1,2-B]pyridazine Inhibitor K00135 Length = 301

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 91/218 (41%), Gaps = 64/218 (29%)
Query: 47  EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE-CHLH----------GLVHRDMKPE 95
           E G L D +      + T  D    +R +L +A+   HLH           + HRD+K +
Sbjct: 89  EMGSLYDYL------QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSK 142
Query: 96  NFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI-----VGSAYYVAPEVLKRK------- 143
           N L    K++      D GL+          D+     VG+  Y+APEVL          
Sbjct: 143 NIL---VKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFD 199
Query: 144 SGPESDVWSIGVITYILLCGRRPFWDKTEDGI-------FKEVLRNKPDF---------- 186
           S    D+W+ G++ + +   RR       +GI       F +V+ N P F          
Sbjct: 200 SYKRVDIWAFGLVLWEV--ARR----MVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVD 253
Query: 187 RRKP-----W---PSISNSAKDFVKKLLVKDPRARLTA 216
           +++P     W   P++++ AK  +K+   ++P ARLTA
Sbjct: 254 QQRPNIPNRWFSDPTLTSLAK-LMKECWYQNPSARLTA 290

>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With Lapatinib Length = 328

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 57/119 (47%), Gaps = 20/119 (16%)
Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-R 142
           LVHRD+   N L KS    + +K TDFGL+  ++  +K  +  G      ++A E +  R
Sbjct: 138 LVHRDLAARNVLVKSP---NHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYR 194
Query: 143 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDF----RRKPWPSISN 196
           K   +SDVWS GV  + L+  G +P+     DGI     R  PD      R P P I  
Sbjct: 195 KFTHQSDVWSYGVTIWELMTFGGKPY-----DGI---PTREIPDLLEKGERLPQPPICT 245

>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild Type Fgf Receptor 2 (Fgfr2) Kinase Domain Length = 370

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 63/146 (43%), Gaps = 8/146 (5%)
Query: 37  LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 96
           LR+  R R   G E    I    + + T KD      Q+ R          +HRD+   N
Sbjct: 174 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARN 233
Query: 97  FLFKSAKEDSSLKATDFGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWS 152
            L     E++ +K  DFGL+   + I   KK  +      ++APE L  R    +SDVWS
Sbjct: 234 VL---VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 290
Query: 153 IGVITY-ILLCGRRPFWDKTEDGIFK 177
            GV+ + I   G  P+     + +FK
Sbjct: 291 FGVLMWEIFTLGGSPYPGIPVEELFK 316

>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2- Aminopyridine Inhibitor Length = 301

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 56/218 (25%), Positives = 91/218 (41%), Gaps = 64/218 (29%)
Query: 47  EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE-CHLH----------GLVHRDMKPE 95
           E G L D +      + T  D    +R +L +A+   HLH           + HRD+K +
Sbjct: 89  EMGSLYDYL------QLTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSK 142
Query: 96  NFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI-----VGSAYYVAPEVLKRK------- 143
           N L    K++      D GL+          D+     VG+  Y+APEVL          
Sbjct: 143 NIL---VKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFD 199
Query: 144 SGPESDVWSIGVITYILLCGRRPFWDKTEDGI-------FKEVLRNKPDF---------- 186
           S    D+W+ G++ + +   RR       +GI       F +V+ N P F          
Sbjct: 200 SYKRVDIWAFGLVLWEV--ARR----MVSNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVD 253
Query: 187 RRKP-----W---PSISNSAKDFVKKLLVKDPRARLTA 216
           +++P     W   P++++ AK  +K+   ++P ARLTA
Sbjct: 254 QQRPNIPNRWFSDPTLTSLAK-LMKECWYQNPSARLTA 290

>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By Bacterial Effector Protein Avrpto Length = 321

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 13/89 (14%)
Query: 83  HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD------IVGSAYYVA 136
           H   ++HRD+K  N L     E+   K TDFG+S   K G +         + G+  Y+ 
Sbjct: 156 HTRAIIHRDVKSINILLD---ENFVPKITDFGIS---KKGTELDQTHLXXVVKGTLGYID 209
Query: 137 PEV-LKRKSGPESDVWSIGVITYILLCGR 164
           PE  +K +   +SDV+S GV+ + +LC R
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238

>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C In The Troponin C-Troponin I Complex Length = 161

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 17/134 (12%)
Query: 284 KNGSISLEE----MRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 339
           ++G IS +E    MR       P +L+E     ++  +D +  G VDF EF+   + V  
Sbjct: 32  EDGCISTKELGKVMRMLGQNPTPEELQE-----MIDEVDEDGSGTVDFDEFLV--MMVRC 84
Query: 340 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDK 393
           +++    K        F  FD + DG+I  EEL++     G       I+ L+++ D + 
Sbjct: 85  MKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNN 144
Query: 394 DGRISLSEFRRLLR 407
           DGRI   EF   ++
Sbjct: 145 DGRIDYDEFLEFMK 158

>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K526e Mutation Responsible For Crouzon Syndrome Length = 324

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 57/136 (41%), Gaps = 8/136 (5%)
Query: 37  LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 96
           LR+  R R   G E    I    + + T KD      Q+ R          +HRD+   N
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARN 187
Query: 97  FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS---AYYVAPEVL-KRKSGPESDVWS 152
            L     E++ +K  DFGL+  I     ++          ++APE L  R    +SDVWS
Sbjct: 188 VL---VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 244
Query: 153 IGVITY-ILLCGRRPF 167
            GV+ + I   G  P+
Sbjct: 245 FGVLMWEIFTLGGSPY 260

>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine Inhibitor Length = 321

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/118 (34%), Positives = 55/118 (46%), Gaps = 18/118 (15%)
Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-R 142
           LVHRD+   N L KS    + +K TDFGL+  ++  +K  +  G      ++A E +  R
Sbjct: 161 LVHRDLAARNVLVKSP---NHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECIHYR 217
Query: 143 KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF----RRKPWPSISN 196
           K   +SDVWS GV  + L+     F  K  DGI     R  PD      R P P I  
Sbjct: 218 KFTHQSDVWSYGVTIWELMT----FGGKPYDGI---PTREIPDLLEKGERLPQPPICT 268

>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain Length = 316

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 59/136 (43%), Gaps = 8/136 (5%)
Query: 37  LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 96
           LR+  R R   G E    I    + + T KD      Q+ R          +HRD+   N
Sbjct: 120 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARN 179
Query: 97  FLFKSAKEDSSLKATDFGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWS 152
            L     E++ +K  DFGL+   + I   KK  +      ++APE L  R    +SDVWS
Sbjct: 180 VL---VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 236
Query: 153 IGVITY-ILLCGRRPF 167
            GV+ + I   G  P+
Sbjct: 237 FGVLMWEIFTLGGSPY 252

>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565a Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 57/136 (41%), Gaps = 8/136 (5%)
Query: 37  LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 96
           LR+  R R   G E    I    + + T KD      Q+ R          +HRD+   N
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARN 187
Query: 97  FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS---AYYVAPEVL-KRKSGPESDVWS 152
            L     E++ +K  DFGL+  I     ++          ++APE L  R    +SDVWS
Sbjct: 188 VL---VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 244
Query: 153 IGVITY-ILLCGRRPF 167
            GV+ + I   G  P+
Sbjct: 245 FGVLMWEIFTLGGSPY 260

>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With Kinase Pto Length = 327

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 13/89 (14%)
Query: 83  HLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD------IVGSAYYVA 136
           H   ++HRD+K  N L     E+   K TDFG+S   K G +         + G+  Y+ 
Sbjct: 156 HTRAIIHRDVKSINILLD---ENFVPKITDFGIS---KKGTELGQTHLXXVVKGTLGYID 209
Query: 137 PEV-LKRKSGPESDVWSIGVITYILLCGR 164
           PE  +K +   +SDV+S GV+ + +LC R
Sbjct: 210 PEYFIKGRLTEKSDVYSFGVVLFEVLCAR 238

>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549t Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 59/136 (43%), Gaps = 8/136 (5%)
Query: 37  LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 96
           LR+  R R   G E    I    + + T KD      Q+ R          +HRD+   N
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARN 187
Query: 97  FLFKSAKEDSSLKATDFGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWS 152
            L     E++ +K  DFGL+   + I   KK  +      ++APE L  R    +SDVWS
Sbjct: 188 VL---VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 244
Query: 153 IGVITY-ILLCGRRPF 167
            GV+ + I   G  P+
Sbjct: 245 FGVLMWEIFTLGGSPY 260

>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic E565g Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 57/136 (41%), Gaps = 8/136 (5%)
Query: 37  LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 96
           LR+  R R   G E    I    + + T KD      Q+ R          +HRD+   N
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARN 187
Query: 97  FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS---AYYVAPEVL-KRKSGPESDVWS 152
            L     E++ +K  DFGL+  I     ++          ++APE L  R    +SDVWS
Sbjct: 188 VL---VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 244
Query: 153 IGVITY-ILLCGRRPF 167
            GV+ + I   G  P+
Sbjct: 245 FGVLMWEIFTLGGSPY 260

>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic N549h Mutation Responsible For Crouzon Syndrome. Length = 324

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 57/136 (41%), Gaps = 8/136 (5%)
Query: 37  LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 96
           LR+  R R   G E    I    + + T KD      Q+ R          +HRD+   N
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARN 187
Query: 97  FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS---AYYVAPEVL-KRKSGPESDVWS 152
            L     E++ +K  DFGL+  I     ++          ++APE L  R    +SDVWS
Sbjct: 188 VL---VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 244
Query: 153 IGVITY-ILLCGRRPF 167
            GV+ + I   G  P+
Sbjct: 245 FGVLMWEIFTLGGSPY 260

>pdb|3B2T|A Chain A, Structure Of Phosphotransferase Length = 311

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 57/136 (41%), Gaps = 8/136 (5%)
Query: 37  LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 96
           LR+  R R   G E    I    + + T KD      Q+ R          +HRD+   N
Sbjct: 115 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLTARN 174
Query: 97  FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS---AYYVAPEVL-KRKSGPESDVWS 152
            L     E++ +K  DFGL+  I     ++          ++APE L  R    +SDVWS
Sbjct: 175 VL---VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 231
Query: 153 IGVITY-ILLCGRRPF 167
            GV+ + I   G  P+
Sbjct: 232 FGVLMWEIFTLGGSPY 247

>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With 10z-Hymenialdisine Length = 339

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 82/208 (39%), Gaps = 59/208 (28%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLF-----------KSAKEDSSL-----KATDFGLSD 117
           Q+ +     H + L H D+KPEN LF           K  +++ +L     K  DFG + 
Sbjct: 126 QICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSAT 185
Query: 118 FIKPGKKFQDIVGSAYYVAPEVLKRKSGPE-SDVWSIG--VITYILLCGRRPFWDKTED- 173
           +    +    +V + +Y APEV+      +  DVWSIG  +I Y L     P  D  E  
Sbjct: 186 Y--DDEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL 243
Query: 174 GIFKEVL-----------RNKPDFR--RKPWPSISNSAK--------------------- 199
            + + +L           R +  F   R  W   S++ +                     
Sbjct: 244 AMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHE 303
Query: 200 ---DFVKKLLVKDPRARLTAAQALSHPW 224
              D ++K+L  DP  R+T  +AL HP+
Sbjct: 304 RLFDLIQKMLEYDPAKRITLREALKHPF 331

>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound To Ldn- 193189 Length = 305

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/186 (26%), Positives = 74/186 (39%), Gaps = 50/186 (26%)
Query: 76  LRVAAEC---HLH----------GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG 122
           L V+A C   HLH           + HRD K  N L KS   +      D GL+     G
Sbjct: 110 LAVSAACGLAHLHVEIFGTQGKPAIAHRDFKSRNVLVKS---NLQCCIADLGLAVMHSQG 166
Query: 123 KKFQDI-----VGSAYYVAPEVLKRK-------SGPESDVWSIGVITYILLCGRRPFWDK 170
             + DI     VG+  Y+APEVL  +       S   +D+W+ G++ + +   RR   + 
Sbjct: 167 SDYLDIGNNPRVGTKRYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI--ARRTIVNG 224
Query: 171 TEDGI---FKEVLRNKPDFR--------RKPWPSISN---------SAKDFVKKLLVKDP 210
             +     F +V+ N P F          +  P+I N              +++    +P
Sbjct: 225 IVEDYRPPFYDVVPNDPSFEDMKKVVCVDQQTPTIPNRLAADPVLSGLAQMMRECWYPNP 284
Query: 211 RARLTA 216
            ARLTA
Sbjct: 285 SARLTA 290

>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase In Complex With Arq 069 Length = 313

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 59/136 (43%), Gaps = 8/136 (5%)
Query: 37  LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 96
           LR+  R R   G E    I    + + T KD      Q+ R          +HRD+   N
Sbjct: 117 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARN 176
Query: 97  FLFKSAKEDSSLKATDFGLS---DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWS 152
            L     E++ +K  DFGL+   + I   KK  +      ++APE L  R    +SDVWS
Sbjct: 177 VL---VTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 233
Query: 153 IGVITY-ILLCGRRPF 167
            GV+ + I   G  P+
Sbjct: 234 FGVLMWEIFTLGGSPY 249

>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase Domain From Human Length = 314

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 48/91 (52%), Gaps = 12/91 (13%)
Query: 80  AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI---VGSAYYVA 136
            E H   + HRD K +N L KS   D +    DFGL+   +PGK   D    VG+  Y+A
Sbjct: 137 GEGHKPSIAHRDFKSKNVLLKS---DLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMA 193
Query: 137 PEVL------KRKSGPESDVWSIGVITYILL 161
           PEVL      +R +    D++++G++ + L+
Sbjct: 194 PEVLEGAINFQRDAFLRIDMYAMGLVLWELV 224

>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain Length = 299

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 26/121 (21%)
Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY------------ 134
            VHRD+   N L     E+  +K  DFG+S         +D+  + YY            
Sbjct: 149 FVHRDLATRNCL---VGENLLVKIGDFGMS---------RDVYSTDYYRVGGHTMLPIRW 196
Query: 135 VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP 192
           + PE ++ RK   ESDVWS+GV+ + I   G++P++  + + + + + + +   R +  P
Sbjct: 197 MPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPRTCP 256
Query: 193 S 193
Sbjct: 257 Q 257

>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To Appcp From D. Discoideum Length = 287

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 25/86 (29%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 87  LVHRDMKPENFLFKSAKEDSSL--KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL---K 141
           +VHRD++  N   +S  E++ +  K  DFGLS   +       ++G+  ++APE +   +
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ--QSVHSVSGLLGNFQWMAPETIGAEE 202
Query: 142 RKSGPESDVWSIGVITYILLCGRRPF 167
                ++D +S  +I Y +L G  PF
Sbjct: 203 ESYTEKADTYSFAMILYTILTGEGPF 228

>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain Length = 332

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 64/137 (46%), Gaps = 22/137 (16%)
Query: 42  RIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC---HLHGLVHRDMKPENFL 98
           +++LC    L D +   +     +++  V +   +++A      H  GL+HRD+KP N  
Sbjct: 139 QMQLCRKENLKDWM--NRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIF 196
Query: 99  FKSAKEDSSLKATDFGLSDFIKPGKKFQDI-------------VGSAYYVAPEVLKRKS- 144
           F     D  +K  DFGL   +   ++ Q +             VG+  Y++PE +   + 
Sbjct: 197 FTM---DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMSPEQIHGNNY 253
Query: 145 GPESDVWSIGVITYILL 161
             + D++S+G+I + LL
Sbjct: 254 SHKVDIFSLGLILFELL 270

>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2 N1-30 Length = 183

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 24/136 (17%)
Query: 285 NGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD 344
           +G ++ E  +Q  A+  P     +    +  A D    G V F +FV A   + +   H+
Sbjct: 33  SGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHE 92
Query: 345 SEKWHLRSQAAFEKFDIDRDGFITPEEL-------------RMHTGLK-----GSIDPLL 386
             +W       F  +DI++DG+I  EE+               +  LK       +D   
Sbjct: 93  KLRW------TFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFF 146
Query: 387 EEADIDKDGRISLSEF 402
           ++ D +KDG ++L EF
Sbjct: 147 QKMDKNKDGIVTLDEF 162

>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1 (Kchip-1) Length = 224

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/136 (24%), Positives = 57/136 (41%), Gaps = 24/136 (17%)
Query: 285 NGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD 344
           +G ++ E  +Q  A+  P     +    +  A D    G V F +FV A   + +   H+
Sbjct: 66  SGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHE 125
Query: 345 SEKWHLRSQAAFEKFDIDRDGFITPEEL-------------RMHTGLK-----GSIDPLL 386
             +W       F  +DI++DG+I  EE+               +  LK       +D   
Sbjct: 126 KLRW------TFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFF 179
Query: 387 EEADIDKDGRISLSEF 402
           ++ D +KDG ++L EF
Sbjct: 180 QKMDKNKDGIVTLDEF 195

>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 263

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 85  HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG-SAYYVAPEVLK-R 142
           +  VHRD+   N L     ED+  K +DFGL+   K     QD       + APE L+ +
Sbjct: 121 NNFVHRDLAARNVL---VSEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREK 174
Query: 143 KSGPESDVWSIGVITY-ILLCGRRPF 167
           K   +SDVWS G++ + I   GR P+
Sbjct: 175 KFSTKSDVWSFGILLWEIYSFGRVPY 200

>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast Calmodulin Length = 77

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 321
           +S L +E++A+ ++ F   D D NGSIS  E+   + + L     E+ V +++  ID + 
Sbjct: 1   SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVM-RSLGLSPSEAEVNDLMNEIDVDG 59
Query: 322 DGLVDFSEFVA 332
           +  ++FSEF+A
Sbjct: 60  NHQIEFSEFLA 70

>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And Kinase Domains Length = 361

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 142
           LVHRD+   N L K+ +    +K TDFGL+  +   +K     G      +     +L R
Sbjct: 172 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 228
Query: 143 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 175
               +SDVWS GV  + L+  G +P+     DGI
Sbjct: 229 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 257

>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In Complex With Inhibitor Staurosporine Length = 278

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 85  HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG-SAYYVAPEVLK-R 142
           +  VHRD+   N L     ED+  K +DFGL+   K     QD       + APE L+ +
Sbjct: 136 NNFVHRDLAARNVL---VSEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREK 189
Query: 143 KSGPESDVWSIGVITY-ILLCGRRPF 167
           K   +SDVWS G++ + I   GR P+
Sbjct: 190 KFSTKSDVWSFGILLWEIYSFGRVPY 215

>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain Harboring The Pathogenic K641r Mutation Responsible For Pfeiffer Syndrome Length = 324

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/136 (27%), Positives = 57/136 (41%), Gaps = 8/136 (5%)
Query: 37  LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 96
           LR+  R R   G E    I    + + T KD      Q+ R          +HRD+   N
Sbjct: 128 LREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARN 187
Query: 97  FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS---AYYVAPEVL-KRKSGPESDVWS 152
            L     E++ ++  DFGL+  I     ++          ++APE L  R    +SDVWS
Sbjct: 188 VL---VTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWS 244
Query: 153 IGVITY-ILLCGRRPF 167
            GV+ + I   G  P+
Sbjct: 245 FGVLMWEIFTLGGSPY 260

>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin N-Terminal Domain Fragment, Residues 1-90 Length = 90

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Composition-based stats.
 Identities = 22/86 (25%), Positives = 51/86 (59%), Gaps = 3/86 (3%)
Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 321
           A  L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D + 
Sbjct: 1   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59
Query: 322 DGLVDFSEFVAATLHVHQLEEHDSEK 347
           +G +DF EF+  T+   ++++ DSE+
Sbjct: 60  NGTIDFPEFL--TMMARKMKDTDSEE 83

>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With Irreversible Inhibitor Length = 286

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 88  VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEV-LKRK 143
           VHRD++  N L     E+   K  DFGL+  I+   ++    G+ +   + APE  L  +
Sbjct: 136 VHRDLRAANIL---VGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 144 SGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 202
              +SDVWS G+ +T +   GR P+       +  +V R    +R    P    S  D +
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 248
Query: 203 KKLLVKDPRARLT 215
            +   KDP  R T
Sbjct: 249 CQCWRKDPEERPT 261

>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With Covalent Inhibitor Length = 286

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 88  VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEV-LKRK 143
           VHRD++  N L     E+   K  DFGL+  I+   ++    G+ +   + APE  L  +
Sbjct: 136 VHRDLRAANIL---VGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 144 SGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 202
              +SDVWS G+ +T +   GR P+       +  +V R    +R    P    S  D +
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 248
Query: 203 KKLLVKDPRARLT 215
            +   KDP  R T
Sbjct: 249 CQCWRKDPEERPT 261

>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length Carboxyl-Terminal Src Kinase At 2.5 A Resolution Length = 450

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 85  HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG-SAYYVAPEVLK-R 142
           +  VHRD+   N L     ED+  K +DFGL+   K     QD       + APE L+ +
Sbjct: 308 NNFVHRDLAARNVL---VSEDNVAKVSDFGLT---KEASSTQDTGKLPVKWTAPEALREK 361
Query: 143 KSGPESDVWSIGVITY-ILLCGRRPF 167
           K   +SDVWS G++ + I   GR P+
Sbjct: 362 KFSTKSDVWSFGILLWEIYSFGRVPY 387

>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To Vinylsulfonamide- Pyrazolopyrimidine 9 Length = 286

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 88  VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEV-LKRK 143
           VHRD++  N L     E+   K  DFGL+  I+   ++    G+ +   + APE  L  +
Sbjct: 136 VHRDLRAANIL---VGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 144 SGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 202
              +SDVWS G+ +T +   GR P+       +  +V R    +R    P    S  D +
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 248
Query: 203 KKLLVKDPRARLT 215
            +   KDP  R T
Sbjct: 249 CQCWRKDPEERPT 261

>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Compex With Hki-272 Length = 328

Iteration: 1
 Score = 42.7 bits (99), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 142
           LVHRD+   N L K+ +    +K TDFGL+  +   +K     G      +     +L R
Sbjct: 139 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 195
Query: 143 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 175
               +SDVWS GV  + L+  G +P+     DGI
Sbjct: 196 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 224

>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In Complex With The Cancer Drug Imatinib. Length = 286

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 88  VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEV-LKRK 143
           VHRD++  N L     E+   K  DFGL+  I+   ++    G+ +   + APE  L  +
Sbjct: 136 VHRDLRAANIL---VGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 144 SGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 202
              +SDVWS G+ +T +   GR P+       +  +V R    +R    P    S  D +
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 248
Query: 203 KKLLVKDPRARLT 215
            +   KDP  R T
Sbjct: 249 CQCWRKDPEERPT 261

>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In Complex With Amp-Pnp Length = 327

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 142
           LVHRD+   N L K+ +    +K TDFGL+  +   +K     G      +     +L R
Sbjct: 138 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 143 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 175
               +SDVWS GV  + L+  G +P+     DGI
Sbjct: 195 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 223

>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase Domain With Erlotinib Length = 337

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 142
           LVHRD+   N L K+ +    +K TDFGL+  +   +K     G      +     +L R
Sbjct: 148 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 204
Query: 143 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 175
               +SDVWS GV  + L+  G +P+     DGI
Sbjct: 205 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 233

>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor Length = 315

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 142
           LVHRD+   N L K+ +    +K TDFGL+  +   +K     G      +     +L R
Sbjct: 132 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 188
Query: 143 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 175
               +SDVWS GV  + L+  G +P+     DGI
Sbjct: 189 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 217

>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor Receptor Length = 333

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 142
           LVHRD+   N L K+ +    +K TDFGL+  +   +K     G      +     +L R
Sbjct: 144 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 200
Query: 143 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 175
               +SDVWS GV  + L+  G +P+     DGI
Sbjct: 201 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 229

>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s) Length = 334

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 142
           LVHRD+   N L K+ +    +K TDFGL+  +   +K     G      +     +L R
Sbjct: 145 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 201
Query: 143 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 175
               +SDVWS GV  + L+  G +P+     DGI
Sbjct: 202 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 230

>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In Complex With Aee788 Length = 328

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 142
           LVHRD+   N L K+ +    +K TDFGL+  +   +K     G      +     +L R
Sbjct: 139 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 195
Query: 143 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 175
               +SDVWS GV  + L+  G +P+     DGI
Sbjct: 196 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 224

>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation Length = 286

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 88  VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEV-LKRK 143
           VHRD++  N L     E+   K  DFGL+  I+   ++    G+ +   + APE  L  +
Sbjct: 136 VHRDLRAANIL---VGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 144 SGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 202
              +SDVWS G+ +T +   GR P+       +  +V R    +R    P    S  D +
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 248
Query: 203 KKLLVKDPRARLT 215
            +   KDP  R T
Sbjct: 249 CQCWRKDPEERPT 261

>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase Domain And A Mig6 Peptide Length = 324

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 142
           LVHRD+   N L K+ +    +K TDFGL+  +   +K     G      +     +L R
Sbjct: 135 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 191
Query: 143 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 175
               +SDVWS GV  + L+  G +P+     DGI
Sbjct: 192 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 220

>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 13-Jab Length = 327

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 142
           LVHRD+   N L K+ +    +K TDFGL+  +   +K     G      +     +L R
Sbjct: 138 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 143 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 175
               +SDVWS GV  + L+  G +P+     DGI
Sbjct: 195 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 223

>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain (G719sT790M) IN The Apo Form Length = 334

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 142
           LVHRD+   N L K+ +    +K TDFGL+  +   +K     G      +     +L R
Sbjct: 145 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 201
Query: 143 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 175
               +SDVWS GV  + L+  G +P+     DGI
Sbjct: 202 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 230

>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In Complex With Amp-Pnp Length = 330

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 142
           LVHRD+   N L K+ +    +K TDFGL+  +   +K     G      +     +L R
Sbjct: 141 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 197
Query: 143 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 175
               +SDVWS GV  + L+  G +P+     DGI
Sbjct: 198 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 226

>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 142
           LVHRD+   N L K+ +    +K TDFGL+  +   +K     G      +     +L R
Sbjct: 141 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 197
Query: 143 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 175
               +SDVWS GV  + L+  G +P+     DGI
Sbjct: 198 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 226

>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src Tyrosine Kinase Domain Complexed With Imatinib Length = 286

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 88  VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEV-LKRK 143
           VHRD++  N L     E+   K  DFGL+  I+   ++    G+ +   + APE  L  +
Sbjct: 136 VHRDLRAANIL---VGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 144 SGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 202
              +SDVWS G+ +T +   GR P+       +  +V R    +R    P    S  D +
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 248
Query: 203 KKLLVKDPRARLT 215
            +   KDP  R T
Sbjct: 249 CQCWRKDPEERPT 261

>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation Length = 327

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 142
           LVHRD+   N L K+ +    +K TDFGL+  +   +K     G      +     +L R
Sbjct: 138 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 143 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 175
               +SDVWS GV  + L+  G +P+     DGI
Sbjct: 195 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 223

>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An Irreversible Inhibitor 34-Jab Length = 327

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 142
           LVHRD+   N L K+ +    +K TDFGL+  +   +K     G      +     +L R
Sbjct: 138 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 143 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 175
               +SDVWS GV  + L+  G +P+     DGI
Sbjct: 195 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 223

>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain Length = 330

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 142
           LVHRD+   N L K+ +    +K TDFGL+  +   +K     G      +     +L R
Sbjct: 141 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 197
Query: 143 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 175
               +SDVWS GV  + L+  G +P+     DGI
Sbjct: 198 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 226

>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With Dacomitinib Length = 329

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 142
           LVHRD+   N L K+ +    +K TDFGL+  +   +K     G      +     +L R
Sbjct: 140 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 196
Query: 143 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 175
               +SDVWS GV  + L+  G +P+     DGI
Sbjct: 197 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 225

>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With Bibw2992 Length = 330

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 142
           LVHRD+   N L K+ +    +K TDFGL+  +   +K     G      +     +L R
Sbjct: 141 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 197
Query: 143 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 175
               +SDVWS GV  + L+  G +P+     DGI
Sbjct: 198 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 226

>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In Complex With Amppnp Length = 334

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 142
           LVHRD+   N L K+ +    +K TDFGL+  +   +K     G      +     +L R
Sbjct: 145 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 201
Query: 143 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 175
               +SDVWS GV  + L+  G +P+     DGI
Sbjct: 202 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 230

>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs Length = 286

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/137 (29%), Positives = 58/137 (42%), Gaps = 20/137 (14%)
Query: 88  VHRDMKPENFLFKSAKEDSSLKATDFGLSDFI-------KPGKKFQDIVGSAYYVAPEV- 139
           VHRD++  N L     E+   K  DFGL+  I       + G KF        + APE  
Sbjct: 136 VHRDLRAANIL---VGENLVCKVADFGLARLIEDNEXTARQGAKF-----PIKWTAPEAA 187
Query: 140 LKRKSGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 198
           L  +   +SDVWS G+ +T +   GR P+       +  +V R    +R    P    S 
Sbjct: 188 LYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESL 244
Query: 199 KDFVKKLLVKDPRARLT 215
            D + +   KDP  R T
Sbjct: 245 HDLMCQCWRKDPEERPT 261

>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In Complex With Dacomitinib (soaked) Length = 329

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 142
           LVHRD+   N L K+ +    +K TDFGL+  +   +K     G      +     +L R
Sbjct: 140 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 196
Query: 143 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 175
               +SDVWS GV  + L+  G +P+     DGI
Sbjct: 197 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 225

>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An Imidazo[2,1-B]thiazole Inhibitor Length = 327

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 142
           LVHRD+   N L K+ +    +K TDFGL+  +   +K     G      +     +L R
Sbjct: 138 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 194
Query: 143 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 175
               +SDVWS GV  + L+  G +P+     DGI
Sbjct: 195 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 223

>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor Mc4b Length = 275

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 88  VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEV-LKRK 143
           VHRD++  N L     E+   K  DFGL+  I+   ++    G+ +   + APE  L  +
Sbjct: 125 VHRDLRAANIL---VGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGR 180
Query: 144 SGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 202
              +SDVWS G+ +T +   GR P+       +  +V R    +R    P    S  D +
Sbjct: 181 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 237
Query: 203 KKLLVKDPRARLT 215
            +   KDP  R T
Sbjct: 238 CQCWRKDPEERPT 250

>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its Inactivator Csk Length = 277

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 12/133 (9%)
Query: 88  VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEV-LKRK 143
           VHRD++  N L     E+   K  DFGL+  I+   ++    G+ +   + APE  L  +
Sbjct: 127 VHRDLRAANIL---VGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGR 182
Query: 144 SGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 202
              +SDVWS G+ +T +   GR P+       +  +V R    +R    P    S  D +
Sbjct: 183 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 239
Query: 203 KKLLVKDPRARLT 215
            +   KDP  R T
Sbjct: 240 CQCWRKDPEERPT 252

>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain Length = 306

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 33/117 (28%)
Query: 74  QMLRVAAEC-----HLHGL--VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 126
           Q+L VA++      +L GL  VHRD+   N L     +   +K  DFG+S         +
Sbjct: 136 QLLAVASQVAAGMVYLAGLHFVHRDLATRNCL---VGQGLVVKIGDFGMS---------R 183
Query: 127 DIVGSAYY------------VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFWD 169
           DI  + YY            + PE +L RK   ESDVWS GV+ + I   G++P++ 
Sbjct: 184 DIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQ 240

>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently Binding To Wz4002 Length = 331

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 142
           LVHRD+   N L K+ +    +K TDFGL+  +   +K     G      +     +L R
Sbjct: 142 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 198
Query: 143 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 175
               +SDVWS GV  + L+  G +P+     DGI
Sbjct: 199 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 227

>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor- Gw572016 Length = 352

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 13/94 (13%)
Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 142
           LVHRD+   N L K+ +    +K TDFGL+  +   +K     G      +     +L R
Sbjct: 163 LVHRDLAARNVLVKTPQH---VKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHR 219
Query: 143 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGI 175
               +SDVWS GV  + L+  G +P+     DGI
Sbjct: 220 IYTHQSDVWSYGVTVWELMTFGSKPY-----DGI 248

>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka Length = 300

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 33/117 (28%)
Query: 74  QMLRVAAEC-----HLHGL--VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 126
           Q+L VA++      +L GL  VHRD+   N L     +   +K  DFG+S         +
Sbjct: 130 QLLAVASQVAAGMVYLAGLHFVHRDLATRNCL---VGQGLVVKIGDFGMS---------R 177
Query: 127 DIVGSAYY------------VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFWD 169
           DI  + YY            + PE +L RK   ESDVWS GV+ + I   G++P++ 
Sbjct: 178 DIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQ 234

>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In Complex With A Novel Substituted Indole Inhibitor Length = 339

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 81/208 (38%), Gaps = 59/208 (28%)
Query: 74  QMLRVAAECHLHGLVHRDMKPENFLF-----------KSAKEDSSL-----KATDFGLSD 117
           Q+ +     H + L H D+KPEN LF           K  +++ +L     K  DFG + 
Sbjct: 126 QICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSAT 185
Query: 118 FIKPGKKFQDIVGSAYYVAPEVLKRKSGPE-SDVWSIG--VITYILLCGRRPFWDKTED- 173
           +    +    +V   +Y APEV+      +  DVWSIG  +I Y L     P  D  E  
Sbjct: 186 Y--DDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHL 243
Query: 174 GIFKEVL-----------RNKPDFR--RKPWPSISNSAK--------------------- 199
            + + +L           R +  F   R  W   S++ +                     
Sbjct: 244 AMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHE 303
Query: 200 ---DFVKKLLVKDPRARLTAAQALSHPW 224
              D ++K+L  DP  R+T  +AL HP+
Sbjct: 304 RLFDLIQKMLEYDPAKRITLREALKHPF 331

>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin Length = 198

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 28/152 (18%)
Query: 277 FDAIDVDKNGSISLEEMRQALAKDLPWKL---------KESRVLEILQAIDCNTDGLVDF 327
           F+ +D++ NG I+L+E+    + D+  KL          +  V    + I  +    V+F
Sbjct: 29  FNFLDINGNGKITLDEIVSKASDDICAKLGATPAQTQRHQEAVEAFFKKIGLDYGKEVEF 88
Query: 328 SEFVAATLHVHQLEEHDSEKWHLR--------SQAAFEKFDIDRDGFITPEELRMHTGLK 379
             FV       +L +HD + W            +A F+ FD D  G I+ +E + + G+ 
Sbjct: 89  PAFVNG---WKELAKHDLKLWSQNKKSLIRNWGEAVFDIFDKDGSGSISLDEWKTYGGIS 145
Query: 380 GSIDPLLEEA-------DIDKDGRISLSEFRR 404
           G I P  E+A       D+D  G++ + E  R
Sbjct: 146 G-ICPSDEDAEKTFKHCDLDNSGKLDVDEMTR 176

>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23 Length = 329

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 56/117 (47%), Gaps = 33/117 (28%)
Query: 74  QMLRVAAEC-----HLHGL--VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ 126
           Q+L VA++      +L GL  VHRD+   N L     +   +K  DFG+S         +
Sbjct: 159 QLLAVASQVAAGMVYLAGLHFVHRDLATRNCL---VGQGLVVKIGDFGMS---------R 206
Query: 127 DIVGSAYY------------VAPE-VLKRKSGPESDVWSIGVITY-ILLCGRRPFWD 169
           DI  + YY            + PE +L RK   ESDVWS GV+ + I   G++P++ 
Sbjct: 207 DIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQ 263

>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSG 145
           ++H D+KPEN L  + K  S++K  DFG S   + G++    + S +Y +PEV L     
Sbjct: 161 IIHCDLKPENILLCNPKR-SAIKIVDFGSS--CQLGQRIYQXIQSRFYRSPEVLLGMPYD 217
Query: 146 PESDVWSIGVI 156
              D+WS+G I
Sbjct: 218 LAIDMWSLGCI 228

>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In Complex With Substrates Length = 326

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/123 (29%), Positives = 54/123 (43%), Gaps = 8/123 (6%)
Query: 60  DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS--- 116
           + + + KD      Q+ R          +HRD+   N L     ED+ +K  DFGL+   
Sbjct: 144 EEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVL---VTEDNVMKIADFGLARDI 200
Query: 117 DFIKPGKKFQDIVGSAYYVAPEVL-KRKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDG 174
             I   KK  +      ++APE L  R    +SDVWS GV+ + I   G  P+     + 
Sbjct: 201 HHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE 260
Query: 175 IFK 177
           +FK
Sbjct: 261 LFK 263

>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 4/71 (5%)
Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSG 145
           ++H D+KPEN L  + K  S++K  DFG S   + G++    + S +Y +PEV L     
Sbjct: 180 IIHCDLKPENILLCNPKR-SAIKIVDFGSS--CQLGQRIYQXIQSRFYRSPEVLLGMPYD 236
Query: 146 PESDVWSIGVI 156
              D+WS+G I
Sbjct: 237 LAIDMWSLGCI 247

>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX Length = 180

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 58/136 (42%), Gaps = 24/136 (17%)
Query: 285 NGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD 344
           +G ++ +  +Q  A+  P     +    +  A D    G V F +FV A   + +   H+
Sbjct: 30  SGVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHE 89
Query: 345 SEKWHLRSQAAFEKFDIDRDGFITPEEL----RMHTGLKGS--------------IDPLL 386
             +W       F  +DI++DG+I  EE+    +    + G+              +D   
Sbjct: 90  KLRW------TFNLYDINKDGYINKEEMMDIVKAIYDMMGAYTYPVLAEDTPRQHVDVFF 143
Query: 387 EEADIDKDGRISLSEF 402
           ++ D +KDG ++L EF
Sbjct: 144 QKMDKNKDGIVTLDEF 159

>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2 (Erbb2). Length = 338

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 38/119 (31%), Positives = 52/119 (43%), Gaps = 20/119 (16%)
Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA----YYVAPEVLKR 142
           LVHRD+   N L KS      +K TDFGL+  +   +      G      +     +L+R
Sbjct: 140 LVHRDLAARNVLVKSPNH---VKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRR 196
Query: 143 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDF----RRKPWPSISN 196
           +   +SDVWS GV  + L+  G +P+     DGI     R  PD      R P P I  
Sbjct: 197 RFTHQSDVWSYGVTVWELMTFGAKPY-----DGIPA---REIPDLLEKGERLPQPPICT 247

>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With Staurosporine Length = 309

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 9/85 (10%)
Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVLK-R 142
           +VHRD+K  N L     +  ++K  DFGLS        F   +   G+  ++APEVL+  
Sbjct: 160 IVHRDLKSPNLL---VDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLRDE 214
Query: 143 KSGPESDVWSIGVITYILLCGRRPF 167
            S  +SDV+S GVI + L   ++P+
Sbjct: 215 PSNEKSDVYSFGVILWELATLQQPW 239

>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer Length = 319

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 39/142 (27%), Positives = 65/142 (45%), Gaps = 27/142 (19%)
Query: 45  LCEGGELLDRILAKK---DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 101
           LC+G  L   +   K   D   T + A  +V+ M       H  G++H+D+K +N  + +
Sbjct: 110 LCKGRTLYSVVRDAKIVLDVNKTRQIAQEIVKGM----GYLHAKGILHKDLKSKNVFYDN 165
Query: 102 AKEDSSLKATDFGL---SDFIKPGK---KFQDIVGSAYYVAPEVLKRKS----------G 145
            K    +  TDFGL   S  ++ G+   K +   G   ++APE++++ S           
Sbjct: 166 GK----VVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFS 221
Query: 146 PESDVWSIGVITYILLCGRRPF 167
             SDV+++G I Y L     PF
Sbjct: 222 KHSDVFALGTIWYELHAREWPF 243

>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean Calmodulin Isoform 4 Fused With The Calmodulin-Binding Domain Of Ntmkp1 Length = 92

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           +D +   +L++ F   D D+NG IS  E+R  +  +L  KL +  V ++++  D + DG 
Sbjct: 3   MDTDAEEELKEAFKVFDKDQNGYISASELRHVMI-NLGEKLTDEEVEQMIKEADLDGDGQ 61
Query: 325 VDFSEFVAATLHV 337
           V++ EFV   + V
Sbjct: 62  VNYEEFVKMMMTV 74

>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C Length = 161

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 284 KNGSISLEE----MRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 339
           ++GSIS +E    MR       P +L+E     ++  +D +  G VDF EF+   + V  
Sbjct: 32  EDGSISTKELGKVMRMLGQNPTPEELQE-----MIDEVDEDGSGTVDFDEFLV--MMVRS 84
Query: 340 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDK 393
           +++    K        F  +D + DG+I  +EL++     G       I+ L+++ D + 
Sbjct: 85  MKDDSKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNN 144
Query: 394 DGRISLSEFRRLLR 407
           DGRI   EF   ++
Sbjct: 145 DGRIDYDEFLEFMK 158

>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C Length = 161

Iteration: 1
 Score = 42.4 bits (98), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 63/134 (47%), Gaps = 17/134 (12%)
Query: 284 KNGSISLEE----MRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 339
           ++GSIS +E    MR       P +L+E     ++  +D +  G VDF EF+   + V  
Sbjct: 32  EDGSISTKELGKVMRMLGQNPTPEELQE-----MIDEVDEDGSGTVDFDEFLV--MMVRS 84
Query: 340 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDK 393
           +++    K        F  FD + DG+I  +EL++     G       I+ L+++ D + 
Sbjct: 85  MKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNN 144
Query: 394 DGRISLSEFRRLLR 407
           DGRI   E+   ++
Sbjct: 145 DGRIDYDEWLEFMK 158

>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant Length = 483

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 10/122 (8%)
Query: 66  KDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIK----- 120
           K   ++  QM+      H    +HRD+KP+NFL    +  + +   DFGL+   +     
Sbjct: 103 KTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTH 162
Query: 121 ---PGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
              P ++ +++ G+A Y +    L  +     D+ S+G +    L G  P W   + G  
Sbjct: 163 QHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLP-WQGLKAGTK 221
Query: 177 KE 178
           K+
Sbjct: 222 KQ 223

>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex With Its Regulatory Subunit Kchip1 (Casp Target) Length = 180

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 57/136 (41%), Gaps = 24/136 (17%)
Query: 285 NGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD 344
           +G ++ +  +Q  A+  P     +    +  A D    G V F +FV A   + +   H+
Sbjct: 30  SGVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHE 89
Query: 345 SEKWHLRSQAAFEKFDIDRDGFITPEEL-------------RMHTGLK-----GSIDPLL 386
             +W       F  +DI++DG+I  EE+               +  LK       +D   
Sbjct: 90  KLRW------TFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFF 143
Query: 387 EEADIDKDGRISLSEF 402
           ++ D +KDG ++L EF
Sbjct: 144 QKMDKNKDGIVTLDEF 159

>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase Complex With Dasatinib Length = 268

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 85  HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK 141
           H  +HRD+   N L      D  +K +DFG++ ++    ++   VG+ +   + APEV  
Sbjct: 123 HQFIHRDLAARNCL---VDRDLCVKVSDFGMTRYVLD-DQYVSSVGTKFPVKWSAPEVFH 178
Query: 142 R-KSGPESDVWSIGVITY-ILLCGRRPF 167
             K   +SDVW+ G++ + +   G+ P+
Sbjct: 179 YFKYSSKSDVWAFGILMWEVFSLGKMPY 206

>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase Activity Length = 286

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 12/133 (9%)
Query: 88  VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEV-LKRK 143
           VHRD+   N L     E+   K  DFGL+  I+   ++    G+ +   + APE  L  +
Sbjct: 136 VHRDLAAANIL---VGENLVCKVADFGLARLIE-DNEYTARQGAKFPIKWTAPEAALYGR 191
Query: 144 SGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 202
              +SDVWS G+ +T +   GR P+       +  +V R    +R    P    S  D +
Sbjct: 192 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 248
Query: 203 KKLLVKDPRARLT 215
            +   KDP  R T
Sbjct: 249 CQCWRKDPEERPT 261

>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With Calcium Bound Length = 198

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/130 (25%), Positives = 57/130 (43%), Gaps = 19/130 (14%)
Query: 286 GSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS 345
           G ++L E +Q              V ++ +  D N DG +DF E+VAA   V + +    
Sbjct: 30  GQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGKVDQK 89
Query: 346 EKWHLRSQAAFEKFDIDRDGFITPEEL-----------RMHTGLKGS--IDPLLEEADID 392
            +W+      F+ +D+D +G I   EL           R +  +      + + ++ DI+
Sbjct: 90  LRWY------FKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDIN 143
Query: 393 KDGRISLSEF 402
            DG +SL EF
Sbjct: 144 GDGELSLEEF 153

>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib Length = 266

Iteration: 1
 Score = 42.0 bits (97), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 24/98 (24%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-R 142
           ++HRD+   N L     E+  +K +DFG++ F+    ++    G+ +   + +PEV    
Sbjct: 124 VIHRDLAARNCL---VGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFS 179
Query: 143 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 179
           +   +SDVWS GV+ + +   G+ P+ +++   + +++
Sbjct: 180 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 217

>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C Length = 161

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 17/134 (12%)
Query: 284 KNGSISLEE----MRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 339
           ++GSIS +E    MR       P +L+E     ++  +D +  G VDF EF+   + V  
Sbjct: 32  EDGSISTKELGKVMRMLGQNPTPEELQE-----MIDEVDEDGSGTVDFDEFLV--MMVRS 84
Query: 340 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDK 393
           +++    K        F   D + DG+I  +EL++     G       I+ L+++ D + 
Sbjct: 85  MKDDSKGKSEEELSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNN 144
Query: 394 DGRISLSEFRRLLR 407
           DGRI   EF   ++
Sbjct: 145 DGRIDYDEFLEFMK 158

>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant Of Human Cardiac Troponin C Length = 161

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 62/134 (46%), Gaps = 17/134 (12%)
Query: 284 KNGSISLEE----MRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 339
           ++GSIS +E    MR       P +L+E     ++  +D +  G VDF EF+   + V  
Sbjct: 32  EDGSISTKELGKVMRMLGQNPTPEELQE-----MIDEVDEDGSGTVDFDEFLV--MMVRS 84
Query: 340 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDK 393
           +++    K        F  FD + DG+I  +EL++     G       I+ L+++ D + 
Sbjct: 85  MKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNN 144
Query: 394 DGRISLSEFRRLLR 407
           DGRI   E    ++
Sbjct: 145 DGRIDYDEXLEFMK 158

>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase Itk Catalytic Domain With Thienopyrazolylindole Inhibitor 090 Length = 266

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/98 (24%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-R 142
           ++HRD+   N L     E+  +K +DFG++ F+    ++    G+ +   + +PEV    
Sbjct: 124 VIHRDLAARNCL---VGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFS 179
Query: 143 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 179
           +   +SDVWS GV+ + +   G+ P+ +++   + +++
Sbjct: 180 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 217

>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed With Imidazo[1,5-A]quinoxaline Length = 267

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/98 (24%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-R 142
           ++HRD+   N L     E+  +K +DFG++ F+    ++    G+ +   + +PEV    
Sbjct: 125 VIHRDLAARNCL---VGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFS 180
Query: 143 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 179
           +   +SDVWS GV+ + +   G+ P+ +++   + +++
Sbjct: 181 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 218

>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase Length = 453

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 12/133 (9%)
Query: 88  VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEV-LKRK 143
           VHRD++  N L     E+   K  DFGL   I+   ++    G+ +   + APE  L  +
Sbjct: 303 VHRDLRAANIL---VGENLVCKVADFGLGRLIE-DNEYTARQGAKFPIKWTAPEAALYGR 358
Query: 144 SGPESDVWSIGV-ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFV 202
              +SDVWS G+ +T +   GR P+       +  +V R    +R    P    S  D +
Sbjct: 359 FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLM 415
Query: 203 KKLLVKDPRARLT 215
            +   KDP  R T
Sbjct: 416 CQCWRKDPEERPT 428

>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A 3,4,5-Trimethoxy Aniline Containing Pyrimidine Length = 309

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 78/185 (42%), Gaps = 37/185 (20%)
Query: 2   IKILIGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDS 61
           +KILI      + L++VNL+     P  P+ ++        +  C+ G L   + +K++ 
Sbjct: 81  LKILI---HIGHHLNVVNLLGACTKPGGPLMVI--------VEFCKFGNLSTYLRSKRNE 129
Query: 62  RYTEKDAAV-------VVRQMLRVAAECHLHG---LVHRDMKPENFLFKSAKEDSSLKAT 111
               KD          ++    +VA           +HRD+   N L     E + +K  
Sbjct: 130 FVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRKXIHRDLAARNILLS---EKNVVKIX 186
Query: 112 DFGLS-------DFIKPGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITY-ILLC 162
           DFGL+       D+++ G    D      ++APE +  R    +SDVWS GV+ + I   
Sbjct: 187 DFGLARDIYKDPDYVRKG----DARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSL 242
Query: 163 GRRPF 167
           G  P+
Sbjct: 243 GASPY 247

>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2 Tyrosine Kinase Catalytic Domain Length = 264

Iteration: 1
 Score = 41.6 bits (96), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 24/98 (24%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-R 142
           ++HRD+   N L     E+  +K +DFG++ F+    ++    G+ +   + +PEV    
Sbjct: 122 VIHRDLAARNCL---VGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFS 177
Query: 143 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 179
           +   +SDVWS GV+ + +   G+ P+ +++   + +++
Sbjct: 178 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 215

>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor Domain Of Centrin Length = 96

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 20/68 (29%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           L +E+  ++R+ FD  D D +G+I  +E++ A+ + L ++ K+  + +++  ID +  G 
Sbjct: 24  LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAM-RALGFEPKKEEIKKMISEIDKDGSGT 82
Query: 325 VDFSEFVA 332
           +DF EF+ 
Sbjct: 83  IDFEEFLT 90

>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain From D. Discoideum Bound To Appcp Length = 287

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 7/86 (8%)
Query: 87  LVHRDMKPENFLFKSAKEDSSL--KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL---K 141
           +VHRD++  N   +S  E++ +  K  DFG S   +       ++G+  ++APE +   +
Sbjct: 145 IVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ--QSVHSVSGLLGNFQWMAPETIGAEE 202
Query: 142 RKSGPESDVWSIGVITYILLCGRRPF 167
                ++D +S  +I Y +L G  PF
Sbjct: 203 ESYTEKADTYSFAMILYTILTGEGPF 228

>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52 Length = 269

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 24/98 (24%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-R 142
           ++HRD+   N L     E+  +K +DFG++ F+    ++    G+ +   + +PEV    
Sbjct: 127 VIHRDLAARNCL---VGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFS 182
Query: 143 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 179
           +   +SDVWS GV+ + +   G+ P+ +++   + +++
Sbjct: 183 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 220

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 36/128 (28%), Positives = 53/128 (41%), Gaps = 33/128 (25%)
Query: 64  TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS---DFIK 120
           TE     ++  +L      H  G++HRD+KP N L     +D S+K  DFGL+   D+ +
Sbjct: 154 TELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCL---VNQDCSVKVCDFGLARTVDYPE 210
Query: 121 PG-------------------------KKFQDIVGSAYYVAPE--VLKRKSGPESDVWSI 153
            G                         ++    V + +Y APE  +L+       DVWSI
Sbjct: 211 NGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSI 270
Query: 154 GVITYILL 161
           G I   LL
Sbjct: 271 GCIFAELL 278

>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor Length = 286

Iteration: 1
 Score = 41.6 bits (96), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 24/98 (24%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY---YVAPEVLK-R 142
           ++HRD+   N L     E+  +K +DFG++ F+    ++    G+ +   + +PEV    
Sbjct: 144 VIHRDLAARNCL---VGENQVIKVSDFGMTRFVLD-DQYTSSTGTKFPVKWASPEVFSFS 199
Query: 143 KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV 179
           +   +SDVWS GV+ + +   G+ P+ +++   + +++
Sbjct: 200 RYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDI 237

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	429
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	1e-177
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	1e-176
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	1e-175
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	1e-173
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	1e-154
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	1e-123
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	1e-123
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	1e-116
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	1e-116
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	1e-114
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	1e-114
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	1e-112
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	1e-111
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	1e-111
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	1e-111
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	1e-109
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	1e-109
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	1e-106
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	1e-104
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	1e-104
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	1e-104
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	1e-102
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	1e-102
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	1e-101
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	1e-101
3bhy_A	283	Death-associated protein kinase 3; death associate	1e-101
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	1e-100
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	6e-98
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	4e-97
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	2e-96
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	2e-96
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	5e-89
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	2e-88
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	2e-81
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	6e-69
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	1e-65
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	4e-63
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	1e-56
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	2e-56
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	8e-56
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	2e-55
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	4e-55
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	8e-55
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	1e-54
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	2e-54
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	2e-53
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	9e-52
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	3e-51
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	1e-50
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	1e-50
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	2e-50
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	4e-50
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	4e-50
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	5e-50
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	3e-49
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	4e-49
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	5e-49
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	7e-49
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	2e-48
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	2e-10
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	2e-48
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	3e-48
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	3e-48
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	8e-48
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	1e-47
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	1e-47
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	2e-47
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	8e-47
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	3e-45
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	2e-44
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	1e-43
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	5e-42
4apc_A	350	Serine/threonine-protein kinase NEK1; transferase;	6e-42
2a19_B	284	Interferon-induced, double-stranded RNA-activated	7e-42
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	2e-40
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	3e-37
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	3e-13
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	1e-36
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	1e-35
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	9e-10
3cs1_A	219	Flagellar calcium-binding protein; myristoylated,	4e-35
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	7e-35
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	6e-07
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	2e-34
1uu3_A	310	HPDK1, 3-phosphoinositide dependent protein kinase	3e-34
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	9e-34
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	7e-33
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	3e-10
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	1e-07
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	8e-33
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	2e-32
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	1e-10
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	5e-32
3fwb_A	161	Cell division control protein 31; gene gating, com	6e-32
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	7e-32
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	2e-31
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	2e-31
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	1e-30
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	6e-15
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	1e-30
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	2e-30
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	2e-30
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	4e-11
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	2e-05
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	2e-30
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	2e-09
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	3e-30
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	4e-30
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	4e-30
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	1e-29
2jnf_A	158	Troponin C; stretch activated muscle contraction,	1e-29
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	2e-29
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	2e-29
3g51_A	325	Ribosomal protein S6 kinase alpha-3; N-terminal ki	3e-29
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	5e-29
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	6e-29
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	7e-29
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	7e-29
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	8e-29
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	2e-11
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	4e-04
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	8e-29
2hps_A	186	Coelenterazine-binding protein with bound coelent;	1e-28
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	2e-28
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	4e-28
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	5e-28
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	5e-28
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	1e-09
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	4e-08
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	7e-28
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	8e-28
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	4e-08
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	9e-28
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	1e-27
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	1e-27
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	1e-27
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	2e-27
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	2e-27
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	3e-27
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	4e-27
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	5e-27
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	7e-27
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	8e-27
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	3e-08
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	1e-26
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	6e-26
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	6e-26
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	7e-26
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	9e-26
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	1e-25
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	1e-25
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	1e-25
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	2e-25
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	2e-25
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	3e-25
3pvu_A	695	Beta-adrenergic receptor kinase 1; transferase, se	3e-25
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	4e-25
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	3e-12
1y1x_A	191	Leishmania major homolog of programmed cell death	4e-25
1y1x_A	191	Leishmania major homolog of programmed cell death	8e-15
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	5e-25
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	6e-25
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	6e-25
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	8e-25
3o0g_A	292	Cell division protein kinase 5; kinase activator c	1e-24
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	1e-24
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	2e-24
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	8e-07
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	2e-24
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	5e-10
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	2e-24
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	2e-24
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	3e-24
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	3e-24
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	3e-23
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	4e-24
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	4e-24
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	6e-24
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	7e-24
3aln_A	327	Dual specificity mitogen-activated protein kinase;	8e-24
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	9e-24
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	1e-23
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	2e-23
2dyl_A	318	Dual specificity mitogen-activated protein kinase	2e-23
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	3e-23
3niz_A	311	Rhodanese family protein; structural genomics, str	4e-23
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	4e-23
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	5e-23
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	5e-15
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	5e-23
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	5e-23
3ork_A	311	Serine/threonine protein kinase; structural genomi	9e-23
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	1e-22
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	1e-22
3fme_A	290	Dual specificity mitogen-activated protein kinase;	1e-22
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	2e-22
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	3e-22
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	3e-22
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	3e-22
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	1e-20
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	5e-09
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	5e-06
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	5e-22
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	8e-22
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	8e-22
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	1e-21
3an0_A	340	Dual specificity mitogen-activated protein kinase;	1e-21
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	2e-21
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	2e-21
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	2e-21
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	3e-21
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	3e-21
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	3e-21
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	3e-21
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	3e-21
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	1e-09
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	4e-21
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	8e-21
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	9e-21
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	9e-21
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	1e-20
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	1e-20
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	1e-20
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	2e-20
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	2e-20
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	3e-20
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	5e-20
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	5e-20
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	1e-19
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	2e-19
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	2e-19
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	2e-19
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	3e-19
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	3e-19
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	5e-19
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	5e-19
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	5e-19
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	4e-11
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	7e-19
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	7e-19
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	6e-11
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	2e-18
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	9e-08
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	2e-18
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	6e-18
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	5e-07
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	1e-17
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	1e-10
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	1e-17
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	1e-17
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	1e-17
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	1e-17
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	2e-17
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	2e-17
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	2e-17
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	5e-11
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	6e-17
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	1e-11
3rp9_A	458	Mitogen-activated protein kinase; structural genom	2e-16
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	2e-16
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	2e-16
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	1e-11
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	2e-16
3uqc_A	286	Probable conserved transmembrane protein; structur	3e-16
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	3e-16
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	1e-12
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	4e-16
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	5e-16
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	5e-16
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	6e-16
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	4e-08
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	3e-15
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	4e-15
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	6e-13
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	5e-15
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	2e-14
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	2e-14
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	5e-10
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	2e-04
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	3e-14
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	2e-08
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	3e-14
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	6e-14
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	7e-14
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	1e-13
2l4h_A	214	Calcium and integrin-binding protein 1; metal bind	1e-13
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	1e-13
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	4e-11
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	2e-13
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	3e-13
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	2e-13
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	2e-04
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	3e-13
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	2e-09
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	5e-13
3q4u_A	301	Activin receptor type-1; structural genomics conso	5e-13
3soc_A	322	Activin receptor type-2A; structural genomics cons	7e-13
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	8e-13
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	8e-13
3li6_A	66	Calcium-binding protein; calcium signaling protein	1e-12
3li6_A	66	Calcium-binding protein; calcium signaling protein	4e-10
3li6_A	66	Calcium-binding protein; calcium signaling protein	3e-05
1wlz_A	105	DJBP, CAP-binding protein complex interacting prot	1e-12
1wlz_A	105	DJBP, CAP-binding protein complex interacting prot	6e-10
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	1e-12
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	1e-12
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	1e-12
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	1e-10
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	3e-04
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	2e-12
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	1e-08
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	2e-12
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	2e-10
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	3e-12
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	1e-07
2d58_A	107	Allograft inflammatory factor 1; EF-hand, metal bi	3e-12
2d58_A	107	Allograft inflammatory factor 1; EF-hand, metal bi	4e-08
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	5e-12
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	8e-09
1yx7_A	83	Calsensin, LAN3-6 antigen; calcium-binding protein	6e-12
1yx7_A	83	Calsensin, LAN3-6 antigen; calcium-binding protein	4e-11
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	6e-12
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	4e-11
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	8e-12
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	1e-10
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	7e-11
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	6e-09
1c7v_A	81	CAVP, calcium vector protein; EF-hand family, calc	8e-11
1c7v_A	81	CAVP, calcium vector protein; EF-hand family, calc	9e-11
1cb1_A	78	Calbindin D9K; calcium-binding protein; NMR {Sus s	1e-10
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	3e-10
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	2e-07
1k9u_A	78	Polcalcin PHL P 7; pollen allergen, calcium-bindin	5e-10
1k9u_A	78	Polcalcin PHL P 7; pollen allergen, calcium-bindin	1e-08
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	3e-09
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	7e-09
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	1e-08
1qx2_A	76	Vitamin D-dependent calcium-binding protein, INTE;	2e-08
1qx2_A	76	Vitamin D-dependent calcium-binding protein, INTE;	9e-08
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	3e-08
3a4u_B	143	Multiple coagulation factor deficiency protein 2;	3e-08
3a4u_B	143	Multiple coagulation factor deficiency protein 2;	8e-06
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	4e-08
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	6e-08
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	6e-08
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	6e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-08
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	6e-08
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	6e-08
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	7e-08
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	8e-08
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	1e-07
1fi6_A	92	EH domain protein REPS1; EPS15 homology domain, EF	1e-07
1fi6_A	92	EH domain protein REPS1; EPS15 homology domain, EF	3e-06
1sjj_A	863	Actinin; 3-helix bundle, calponin homology domain,	1e-07
1c07_A	95	Protein (epidermal growth factor receptor pathway	1e-07
1c07_A	95	Protein (epidermal growth factor receptor pathway	8e-07
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	1e-07
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	2e-07
1xk4_A	93	Calgranulin A; S100 family, heterotetramer, metal	2e-07
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	2e-07
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	2e-07
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	3e-07
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	3e-07
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	3e-07
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	3e-07
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	3e-07
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	4e-07
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	9e-06
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	2e-04
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	4e-07
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	4e-07
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	4e-07
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	4e-07
1iq3_A	110	Ralbp1-interacting protein (partner of ralbp1); EF	5e-07
1iq3_A	110	Ralbp1-interacting protein (partner of ralbp1); EF	4e-06
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	5e-07
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	6e-07
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	8e-07
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	1e-06
2kgr_A	111	Intersectin-1; structure, alternative splicing, ca	1e-06
2kgr_A	111	Intersectin-1; structure, alternative splicing, ca	3e-06
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	1e-06
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	1e-06
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	1e-06
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	2e-06
2kax_A	92	Protein S100-A5; EF-hand, calcium binding protien,	2e-06
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	3e-06
3nxa_A	100	Protein S100-A16; S100 family, calcium binding pro	3e-06
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	4e-06
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	4e-06
2h2k_A	106	Protein S100-A13; calcium binding protein, metal b	6e-06
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	6e-06
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	7e-06
1a4p_A	96	S100A10; S100 family, EF-hand protein, ligand of a	7e-06
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	8e-06
3bow_A	714	Calpain-2 catalytic subunit; cysteine protease, in	8e-06
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	9e-06
3zwh_A	104	Protein S100-A4; Ca-binding protein-motor protein	1e-05
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	1e-05
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	1e-05
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	1e-05
4eto_A	93	Protein S100-A4; calcium-binding protein, EF-hand,	1e-05
1snl_A	103	Nucleobindin 1, calnuc; EF-hand, calcium-binding,	1e-05
1snl_A	103	Nucleobindin 1, calnuc; EF-hand, calcium-binding,	2e-05
4aoj_A	329	High affinity nerve growth factor receptor; transf	2e-05
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	2e-05
2lnk_A	113	Protein S100-A4; EF-hand, calcium binding, all alp	2e-05
3zzw_A	289	Tyrosine-protein kinase transmembrane receptor RO;	3e-05
2i7a_A	174	Calpain 13; calcium-dependent cytoplasmic cysteine	3e-05
2i7a_A	174	Calpain 13; calcium-dependent cytoplasmic cysteine	2e-04
3pls_A	298	Macrophage-stimulating protein receptor; protein k	3e-05
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	3e-05
1qjt_A	99	EH1, epidermal growth factor receptor substrate su	4e-05
1qjt_A	99	EH1, epidermal growth factor receptor substrate su	9e-05
2wcb_A	95	Protein S100-A12; calcium signalling, HOST-parasit	5e-05
3v5q_A	297	NT-3 growth factor receptor; kinase domain, kinase	5e-05
1k2h_A	93	S100A1, S-100 protein, alpha chain; non-covalent h	5e-05
3rm1_A	92	Protein S100-B; alpha-helical, EF hand, metal bind	6e-05
1djx_A	624	PLC-D1, phosphoinositide-specific phospholipase C,	6e-05
1j55_A	95	S-100P protein; metal binding protein; 2.00A {Homo	6e-05
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	6e-05
1qls_A	99	S100C protein, calgizzarin; metal-binding protein/	8e-05
1k8u_A	90	S100A6, calcyclin, CACY; calcium regulatory protei	1e-04
3fia_A	121	Intersectin-1; EH 1 domain, NESG, structural genom	1e-04
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	1e-04
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	2e-04
1nub_A	229	Basement membrane protein BM-40; extracellular mod	2e-04
3a8r_A	179	Putative uncharacterized protein; EF-hand, membran	2e-04
3nso_A	101	Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta	2e-04
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	2e-04
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	2e-04
2y5i_A	99	S100Z, S100 calcium binding protein Z; metal-bindi	2e-04
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	3e-04
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	3e-04
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	3e-04
1xk4_C	113	Calgranulin B; S100 family, heterotetramer, metal	3e-04
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	4e-04
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	4e-04
3n22_A	98	Protein S100-A2; EF-hand, calcium-binding, zinc-bi	5e-04
1eh2_A	106	EPS15; calcium binding, signaling domain, NPF bind	5e-04
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	7e-04
1psr_A	100	Psoriasin, S100A7; EF-hand protein, MAD phasing, p	8e-04

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei} Length = 504

 Score =  504 bits (1299), Expect = e-177
 Identities = 130/381 (34%), Positives = 199/381 (52%), Gaps = 23/381 (6%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
             EGGEL ++I+ +   ++ E DAA +++Q+L      H H +VHRD+KPEN L ++   
Sbjct: 127 FYEGGELFEQIINRH--KFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNS 184

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGR 164
             ++K  DFGLS F     K +D +G+AYY+APEVLK+K   + DVWS GVI YILLCG 
Sbjct: 185 LLNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGY 244

Query: 165 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 224
            PF  + +  I K+V + K  F    W +IS+ AK+ +K +L  D   R TA +AL+  W
Sbjct: 245 PPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRW 304

Query: 225 VREG---GDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTL-DDEELADLRDQFDAI 280
           +++     + S+       L+NMR+F    +L Q A+  + S L   EE  +L D F  +
Sbjct: 305 IKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAILFIGSKLTTLEERKELTDIFKKL 364

Query: 281 DVDKNGSISLEEMRQALAK-------DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAA 333
           D + +G +  +E+ +               K  E  V  IL+ +D + +G +++SEF++ 
Sbjct: 365 DKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISV 424

Query: 334 TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEA 389
            +    L          R + AF  FD D+ G IT EEL    GL      + + +L EA
Sbjct: 425 CMDKQILF------SEERLRRAFNLFDTDKSGKITKEELANLFGLTSISEKTWNDVLGEA 478

Query: 390 DIDKDGRISLSEFRRLLRTAS 410
           D +KD  I   EF  ++    
Sbjct: 479 DQNKDNMIDFDEFVSMMHKIC 499

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A* Length = 494

 Score =  500 bits (1289), Expect = e-176
 Identities = 135/385 (35%), Positives = 212/385 (55%), Gaps = 24/385 (6%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
             +GGEL D I+ +   ++ E DAAV+++Q+L      H H +VHRD+KPEN L +S ++
Sbjct: 117 CYKGGELFDEIIHRM--KFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEK 174

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGR 164
           D+ +K  DFGLS   +  KK ++ +G+AYY+APEVL++K   + DVWSIGVI +ILL G 
Sbjct: 175 DALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGY 234

Query: 165 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 224
            PF  +T+  I ++V + K  F    W ++S  AKD +K++L  D + R++A QAL HPW
Sbjct: 235 PPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPW 294

Query: 225 VREGGDASE----IPIDISVLNNMRQFVKYSRLKQFALRALASTL-DDEELADLRDQFDA 279
           ++E     E    +P   + + NMR+F    +L Q AL  +AS L   EE  +L D F  
Sbjct: 295 IKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQAALLYMASKLTSQEETKELTDIFRH 354

Query: 280 IDVDKNGSISLEEMRQALAK-------DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 332
           ID + +G +  +E+    +K              ES V  IL A D + +G +D+SEFV 
Sbjct: 355 IDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVT 414

Query: 333 ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEE 388
             +    L   D      + ++AF+KFD D +G I+ +EL    GL      +   ++  
Sbjct: 415 VAMDRKSLLSKD------KLESAFQKFDQDGNGKISVDELASVFGLDHLESKTWKEMISG 468

Query: 389 ADIDKDGRISLSEFRRLLRTASISS 413
            D + DG +   EF ++++    ++
Sbjct: 469 IDSNNDGDVDFEEFCKMIQKLCSNN 493

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A* Length = 486

 Score =  498 bits (1283), Expect = e-175
 Identities = 131/390 (33%), Positives = 205/390 (52%), Gaps = 32/390 (8%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L  GGEL D I+ +K  R++E DAA +++Q+       H H +VHRD+KPEN L +S ++
Sbjct: 102 LYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEK 159

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGR 164
           D  +K  DFGLS   +   K +D +G+AYY+APEVL+     + DVWS GVI YILL G 
Sbjct: 160 DCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGT 219

Query: 165 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 224
            PF+ K E  I K V   K  F    W +IS+ AKD ++K+L   P  R+TA Q L HPW
Sbjct: 220 PPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPW 279

Query: 225 VR----EGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTL-DDEELADLRDQFDA 279
           ++    E    S++P   S + N+RQF    +L Q AL  +AS L   +E   L + F  
Sbjct: 280 IQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQAALLYMASKLTTLDETKQLTEIFRK 339

Query: 280 IDVDKNGSISLEEMRQALAKDLPWK-------------LKESRVLEILQAIDCNTDGLVD 326
           +D + +G +  +E+ +   + +  K               E ++  ++  +D +  G ++
Sbjct: 340 LDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIE 399

Query: 327 FSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS----- 381
           +SEF+A+ +    L   +      R + AF+ FD D  G I+ +EL        S     
Sbjct: 400 YSEFIASAIDRTILLSRE------RMERAFKMFDKDGSGKISTKELFKLFSQADSSIQME 453

Query: 382 -IDPLLEEADIDKDGRISLSEFRRLLRTAS 410
            ++ ++E+ D +KDG +  +EF  +L+   
Sbjct: 454 ELESIIEQVDNNKDGEVDFNEFVEMLQNFV 483

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A* Length = 484

 Score =  491 bits (1267), Expect = e-173
 Identities = 126/381 (33%), Positives = 199/381 (52%), Gaps = 26/381 (6%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           +  GGEL D I+++K  R++E DAA ++RQ+L      H + +VHRD+KPEN L +S  +
Sbjct: 107 VYTGGELFDEIISRK--RFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSK 164

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGR 164
           D++++  DFGLS   +  KK +D +G+AYY+APEVL      + DVWS GVI YILL G 
Sbjct: 165 DANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGC 224

Query: 165 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 224
            PF    E  I K+V + K  F    W  +S SAKD ++K+L   P  R++A  AL H W
Sbjct: 225 PPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEW 284

Query: 225 VR---EGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTL-DDEELADLRDQFDAI 280
           ++   +   + ++P   + + N+RQF    +L Q AL  + S L   +E  +L   F  +
Sbjct: 285 IQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKELTAIFHKM 344

Query: 281 DVDKNGSISLEEMRQALAKDLPW----------KLKESRVLEILQAIDCNTDGLVDFSEF 330
           D + +G +   E+ +   + +               E  V ++L A+D + +G +++SEF
Sbjct: 345 DKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEF 404

Query: 331 VAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLL 386
           V   +    L   +      R + AF  FD D  G I+  EL    G+      +   +L
Sbjct: 405 VTVAMDRKTLLSRE------RLERAFRMFDSDNSGKISSTELATIFGVSDVDSETWKSVL 458

Query: 387 EEADIDKDGRISLSEFRRLLR 407
            E D + DG +   EF+++L 
Sbjct: 459 SEVDKNNDGEVDFDEFQQMLL 479

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens} Length = 444

 Score =  442 bits (1139), Expect = e-154
 Identities = 90/367 (24%), Positives = 160/367 (43%), Gaps = 25/367 (6%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L  GGEL + I+A++   Y+E DA+  ++Q+L     CH  G+VHR++KPEN L  S  +
Sbjct: 91  LVTGGELFEDIVARE--YYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLK 148

Query: 105 DSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC 162
            +++K  DFGL+  ++   + +    G+  Y++PEVL++   G   D+W+ GVI YILL 
Sbjct: 149 GAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLV 208

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           G  PFWD+ +  +++++     DF    W +++  AKD + K+L  +P  R+TAA+AL H
Sbjct: 209 GYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268

Query: 223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALAST--LDDEELADLRDQFDAI 280
           PW+      +        ++ +++F    +LK   L  + +T      +   ++     I
Sbjct: 269 PWISHRSTVASCMHRQETVDCLKKFNARRKLKGAILTVMLATRNFSVRKQEIIKVTEQLI 328

Query: 281 DVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 340
           +   NG                 K+ +  +         N    +DF  F    L     
Sbjct: 329 EAISNGDFESYT-----------KMCDPGMTAFEPEALGNLVEGLDFHRFYFENLWSRNS 377

Query: 341 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMH---TGLKGSIDPLLEEADIDKDGRI 397
           +   +                D    I    +  +    G+  +           +DG+ 
Sbjct: 378 KPVHTTIL-----NPHIHLMGDESACIAYIRITQYLDAGGIPRTAQSEETRVWHRRDGKW 432

Query: 398 SLSEFRR 404
            +  F R
Sbjct: 433 QIVHFHR 439

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A Length = 351

 Score =  361 bits (928), Expect = e-123
 Identities = 75/243 (30%), Positives = 129/243 (53%), Gaps = 5/243 (2%)

Query: 45  LCEGGELLDRILAKKDS--RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
             +G +L   I+ + D+   Y+E  A+  +RQ+L     CH + ++HRD+KP   L  S 
Sbjct: 107 FMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASK 166

Query: 103 KEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYIL 160
           +  + +K   FG++    + G      VG+ +++APEV+KR+  G   DVW  GVI +IL
Sbjct: 167 ENSAPVKLGGFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFIL 226

Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           L G  PF+  T++ +F+ +++ K     + W  IS SAKD V+++L+ DP  R+T  +AL
Sbjct: 227 LSGCLPFYG-TKERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEAL 285

Query: 221 SHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAI 280
           +HPW++E    +        +  +R+F    +LK   L A++S   +    D  ++    
Sbjct: 286 NHPWLKERDRYAYKIHLPETVEQLRKFNARRKLKGAVLAAVSSHKFNSFYGDPPEELPDF 345

Query: 281 DVD 283
             D
Sbjct: 346 SED 348

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B Length = 362

 Score =  360 bits (926), Expect = e-123
 Identities = 75/248 (30%), Positives = 129/248 (52%), Gaps = 6/248 (2%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L  GGEL + I+A++   Y+E DA+  ++Q+L   A CH +G+VHR++KPEN L  S  +
Sbjct: 109 LVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAK 166

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCG 163
            +++K  DFGL+  +   + +    G+  Y++PEVLK+       D+W+ GVI YILL G
Sbjct: 167 GAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 226

Query: 164 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 223
             PFWD+ +  ++ ++     D+    W +++  AK  +  +L  +P+ R+TA QAL  P
Sbjct: 227 YPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVP 286

Query: 224 WVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVD 283
           W+      +        ++ +++F    +LK   L  + +T     L++L          
Sbjct: 287 WICNRERVASAIHRQDTVDCLKKFNARRKLKGAILTTMIAT---RNLSNLGRNLLNKKEQ 343

Query: 284 KNGSISLE 291
              S   E
Sbjct: 344 GPPSTIKE 351

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7 Length = 321

 Score =  343 bits (881), Expect = e-116
 Identities = 64/233 (27%), Positives = 117/233 (50%), Gaps = 7/233 (3%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
              G ++ +RI         E++    V Q+       H H + H D++PEN ++++ + 
Sbjct: 82  FISGLDIFERINTS-AFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQT-RR 139

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCG 163
            S++K  +FG +  +KPG  F+ +  +  Y APEV +       +D+WS+G + Y+LL G
Sbjct: 140 SSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSG 199

Query: 164 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 223
             PF  +T   I + ++  +  F  + +  IS  A DFV +LLVK+ ++R+TA++AL HP
Sbjct: 200 INPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHP 259

Query: 224 WVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQ 276
           W+++  +     +   V+  ++    Y  L +  L  + S         +R Q
Sbjct: 260 WLKQKIE----RVSTKVIRTLKHRRYYHTLIKKDLNMVVSAARISCGGAIRSQ 308

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C Length = 400

 Score =  343 bits (882), Expect = e-116
 Identities = 71/240 (29%), Positives = 118/240 (49%), Gaps = 6/240 (2%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
             +GGEL  RI  + D  +TE++A+ +++ +       H   + HRD+KPEN L+ S + 
Sbjct: 140 CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRP 199

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCG 163
           ++ LK TDFG +              + YYVAPEVL  +      D+WS+GVI YILLCG
Sbjct: 200 NAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 259

Query: 164 RRPFWDK----TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA 219
             PF+         G+   +   + +F    W  +S   K  ++ LL  +P  R+T  + 
Sbjct: 260 YPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEF 319

Query: 220 LSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDA 279
           ++HPW+ +     + P+  S +    +  ++  +K+    ALA+   D E   ++   DA
Sbjct: 320 MNHPWIMQSTKVPQTPLHTSRVLKEDKE-RWEDVKEEMTSALATMRVDYEQIKIKKIEDA 378

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens} Length = 349

 Score =  338 bits (869), Expect = e-114
 Identities = 93/222 (41%), Positives = 134/222 (60%), Gaps = 6/222 (2%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L  GGEL DRI+ K    Y+E+DAA  V+Q+L   A  H +G+VHRD+KPEN L+ +   
Sbjct: 129 LVTGGELFDRIVEKG--YYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAP 186

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCG 163
           D+ LK  DFGLS  ++     + + G+  Y APE+L+  + GPE D+WS+G+ITYILLCG
Sbjct: 187 DAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCG 246

Query: 164 RRPFWDKTED-GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
             PF+D+  D  +F+ +L  +  F    W  +S +AKD V+KL+V DP+ RLT  QAL H
Sbjct: 247 FEPFYDERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306

Query: 223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALAST 264
           PWV   G A+      +    +++F    +LK      +AS+
Sbjct: 307 PWVT--GKAANFVHMDTAQKKLQEFNARRKLKAAVKAVVASS 346

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A* Length = 277

 Score =  335 bits (862), Expect = e-114
 Identities = 79/192 (41%), Positives = 115/192 (59%), Gaps = 2/192 (1%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           LC GGEL +R++ K+   + E DAA +++ +L   A CH   + HRD+KPENFLF +   
Sbjct: 87  LCTGGELFERVVHKR--VFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSP 144

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGR 164
           DS LK  DFGL+   KPGK  +  VG+ YYV+P+VL+   GPE D WS GV+ Y+LLCG 
Sbjct: 145 DSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGY 204

Query: 165 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 224
            PF   T+  +  ++      F  K W ++S  A+  +++LL K P+ R+T+ QAL H W
Sbjct: 205 PPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALEHEW 264

Query: 225 VREGGDASEIPI 236
             +   +S   +
Sbjct: 265 FEKQLSSSPRNL 276

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens} Length = 326

 Score =  331 bits (851), Expect = e-112
 Identities = 80/243 (32%), Positives = 124/243 (51%), Gaps = 14/243 (5%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L  GGEL D +  K+    TE++A   ++Q+L      H   + H D+KPEN +      
Sbjct: 95  LVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV 152

Query: 105 DSS-LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC 162
               +K  DFGL+  I  G +F++I G+  +VAPE++  +  G E+D+WSIGVITYILL 
Sbjct: 153 PKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           G  PF   T+      V     +F  + + + S  AKDF+++LLVKDP+ R+T   +L H
Sbjct: 213 GASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272

Query: 223 PWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDV 282
           PW++              L+     V   + K+FA R  ++         L D F+A  +
Sbjct: 273 PWIKPKDTQ-------QALSRKASAVNMEKFKKFAARKKSNNG---SGGGLNDIFEAQKI 322

Query: 283 DKN 285
           + +
Sbjct: 323 EWH 325

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A* Length = 287

 Score =  328 bits (843), Expect = e-111
 Identities = 82/183 (44%), Positives = 113/183 (61%), Gaps = 2/183 (1%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L  GGEL D I+ +K  R++E DAA +++Q+       H H +VHRD+KPEN L +S ++
Sbjct: 102 LYTGGELFDEIIKRK--RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEK 159

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGR 164
           D  +K  DFGLS   +   K +D +G+AYY+APEVL+     + DVWS GVI YILL G 
Sbjct: 160 DCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGT 219

Query: 165 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 224
            PF+ K E  I K V   K  F    W +IS+ AKD ++K+L   P  R+TA Q L HPW
Sbjct: 220 PPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPW 279

Query: 225 VRE 227
           +++
Sbjct: 280 IQK 282

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A* Length = 327

 Score =  328 bits (844), Expect = e-111
 Identities = 61/215 (28%), Positives = 106/215 (49%), Gaps = 2/215 (0%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
              GGE+    L +     +E D   +++Q+L      H + +VH D+KP+N L  S   
Sbjct: 110 YAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYP 169

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCG 163
              +K  DFG+S  I    + ++I+G+  Y+APE+L        +D+W+IG+I Y+LL  
Sbjct: 170 LGDIKIVDFGMSRKIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTH 229

Query: 164 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 223
             PF  +     +  + +   D+  + + S+S  A DF++ LLVK+P  R TA   LSH 
Sbjct: 230 TSPFVGEDNQETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHS 289

Query: 224 WVREGGDASEI-PIDISVLNNMRQFVKYSRLKQFA 257
           W+++    +   P + S  +  +     S   + +
Sbjct: 290 WLQQWDFENLFHPEETSSSSQTQDHSVRSSEDKTS 324

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A* Length = 336

 Score =  328 bits (844), Expect = e-111
 Identities = 80/233 (34%), Positives = 121/233 (51%), Gaps = 10/233 (4%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
             EGGEL  RI  + D  +TE++AA ++R +       H H + HRD+KPEN L+ S ++
Sbjct: 107 CMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEK 166

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCG 163
           D+ LK TDFG +         Q    + YYVAPEVL  +      D+WS+GVI YILLCG
Sbjct: 167 DAVLKLTDFGFAKETTQN-ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 225

Query: 164 RRPFWDKTE----DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA 219
             PF+  T      G+ + +   +  F    W  +S  AK  ++ LL  DP  RLT  Q 
Sbjct: 226 FPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQF 285

Query: 220 LSHPWVREGGDASEIPIDIS-VLNNMRQFVKYSRLKQFALRALAS-TLDDEEL 270
           ++HPW+ +     + P+  + VL   +       +K+    ALA+  +D +++
Sbjct: 286 MNHPWINQSMVVPQTPLHTARVLQEDKDHWD--EVKEEMTSALATMRVDYDQV 336

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii} Length = 285

 Score =  323 bits (830), Expect = e-109
 Identities = 67/186 (36%), Positives = 107/186 (57%), Gaps = 3/186 (1%)

Query: 45  LCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
            CEGGELL+RI++   +    +E   A +++QM+   A  H   +VH+D+KPEN LF+  
Sbjct: 101 TCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDT 160

Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 162
              S +K  DFGL++  K  +   +  G+A Y+APEV KR    + D+WS GV+ Y LL 
Sbjct: 161 SPHSPIKIIDFGLAELFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLT 220

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           G  PF   + + + ++    +P++  +  P ++  A D +K++L KDP  R +AAQ L H
Sbjct: 221 GCLPFTGTSLEEVQQKATYKEPNYAVECRP-LTPQAVDLLKQMLTKDPERRPSAAQVLHH 279

Query: 223 PWVREG 228
            W ++ 
Sbjct: 280 EWFKQA 285

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A* Length = 284

 Score =  315 bits (810), Expect = e-106
 Identities = 70/198 (35%), Positives = 114/198 (57%), Gaps = 4/198 (2%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L  GGEL + I+A++   Y+E DA+  ++Q+L   A CH +G+VHR++KPEN L  S  +
Sbjct: 86  LVTGGELFEDIVARE--FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAK 143

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCG 163
            +++K  DFGL+  +   + +    G+  Y++PEVLK+       D+W+ GVI YILL G
Sbjct: 144 GAAVKLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203

Query: 164 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 223
             PFWD+ +  ++ ++     D+    W +++  AK  +  +L  +P+ R+TA QAL  P
Sbjct: 204 YPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKVP 263

Query: 224 WVREGGD-ASEIPIDISV 240
           W+      AS I    +V
Sbjct: 264 WICNRERVASAIHRQDTV 281

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A Length = 365

 Score =  312 bits (801), Expect = e-104
 Identities = 66/188 (35%), Positives = 105/188 (55%), Gaps = 12/188 (6%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L   GEL D +  K     +EK+   ++R +L   +  H + +VHRD+KPEN L     +
Sbjct: 181 LMRKGELFDYLTEKV--ALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLD---D 235

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-------GPESDVWSIGVIT 157
           +  ++ +DFG S  ++PG+K +++ G+  Y+APE+LK          G E D+W+ GVI 
Sbjct: 236 NMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVIL 295

Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
           + LL G  PFW + +  + + ++  +  F    W   S++ KD + +LL  DP ARLTA 
Sbjct: 296 FTLLAGSPPFWHRRQILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAE 355

Query: 218 QALSHPWV 225
           QAL HP+ 
Sbjct: 356 QALQHPFF 363

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A* Length = 361

 Score =  312 bits (801), Expect = e-104
 Identities = 81/264 (30%), Positives = 129/264 (48%), Gaps = 8/264 (3%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L  GGEL D +  K+    +E++A   ++Q+L      H   + H D+KPEN +      
Sbjct: 96  LVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNI 153

Query: 105 DSS-LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC 162
               +K  DFGL+  I+ G +F++I G+  +VAPE++  +  G E+D+WSIGVITYILL 
Sbjct: 154 PIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           G  PF   T+      +     DF  + +   S  AKDF++KLLVK+ R RLT  +AL H
Sbjct: 214 GASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRH 273

Query: 223 PWVREGGDASEI--PIDISVLNNMRQFVKYSRLKQ-FALRALASTLDDEELA-DLRDQFD 278
           PW+        +     +  L N ++     R K  F++ +L + L    +        +
Sbjct: 274 PWITPVDTQQAMVRRESVVNLENFKKQYVRRRWKLSFSIVSLCNHLTRSLMKKVHLRTSE 333

Query: 279 AIDVDKNGSISLEEMRQALAKDLP 302
            +   ++ +      R+AL     
Sbjct: 334 DLRNCESDTEENIARRKALHPRRR 357

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A Length = 325

 Score =  310 bits (797), Expect = e-104
 Identities = 66/234 (28%), Positives = 114/234 (48%), Gaps = 21/234 (8%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L  GGEL +RI  KK   ++E +A+ ++R+++   +  H  G+VHRD+KPEN LF    +
Sbjct: 87  LLNGGELFERIKKKK--HFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDEND 144

Query: 105 DSSLKATDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC 162
           +  +K  DFG +    P  +  +    + +Y APE+L +       D+WS+GVI Y +L 
Sbjct: 145 NLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLS 204

Query: 163 GRRPFWDKTED-------GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 215
           G+ PF              I K++ +    F  + W ++S  AKD ++ LL  DP  RL 
Sbjct: 205 GQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLK 264

Query: 216 AAQALSHPWVREGGDASEIPI---------DISVLNNMR-QFVKYSRLKQFALR 259
            +    + W+++G   S  P+           +V   ++  F  +++ K+    
Sbjct: 265 MSGLRYNEWLQDGSQLSSNPLMTPDILGSSGAAVHTCVKATFHAFNKYKREGFC 318

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score =  315 bits (808), Expect = e-102
 Identities = 77/282 (27%), Positives = 128/282 (45%), Gaps = 11/282 (3%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
              GGEL +++  + +   +E +A   +RQ+ +     H +  VH D+KPEN +F + K 
Sbjct: 235 FMSGGELFEKVADEHNK-MSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTT-KR 292

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCG 163
            + LK  DFGL+  + P +  +   G+A + APEV + K  G  +D+WS+GV++YILL G
Sbjct: 293 SNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 352

Query: 164 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 223
             PF  + +D   + V     +     +  IS   KDF++KLL+ DP  R+T  QAL HP
Sbjct: 353 LSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHP 412

Query: 224 WVREG-GDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDV 282
           W+  G     +  I  S    +R  +K           L        +++          
Sbjct: 413 WLTPGNAPGRDSQIPSSRYTKIRDSIK--TKYDAWPEPLPPL---GRISNYSSLRKHRPQ 467

Query: 283 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQA-IDCNTDG 323
           + +   +  +  +A  + +  K   + V E   A   C    
Sbjct: 468 EYSIRDAFWDRSEAQPRFIV-KPYGTEVGEGQSANFYCRVIA 508

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A* Length = 298

 Score =  304 bits (782), Expect = e-102
 Identities = 67/198 (33%), Positives = 105/198 (53%), Gaps = 12/198 (6%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L + GEL D +  K     +EK+   ++R +L V    H   +VHRD+KPEN L     +
Sbjct: 105 LMKKGELFDYLTEKV--TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD---D 159

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-------GPESDVWSIGVIT 157
           D ++K TDFG S  + PG+K +++ G+  Y+APE+++          G E D+WS GVI 
Sbjct: 160 DMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 219

Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
           Y LL G  PFW + +  + + ++     F    W   S++ KD V + LV  P+ R TA 
Sbjct: 220 YTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAE 279

Query: 218 QALSHPWVREGGDASEIP 235
           +AL+HP+ ++        
Sbjct: 280 EALAHPFFQQYVVEEVRH 297

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A Length = 321

 Score =  304 bits (780), Expect = e-101
 Identities = 76/224 (33%), Positives = 116/224 (51%), Gaps = 7/224 (3%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L  GGEL D +  K+    +E++A   ++Q+L      H   + H D+KPEN +      
Sbjct: 96  LVSGGELFDFLAQKE--SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNI 153

Query: 105 DSS-LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC 162
               +K  DFGL+  I+ G +F++I G+  +VAPE++  +  G E+D+WSIGVITYILL 
Sbjct: 154 PIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           G  PF   T+      +     DF  + +   S  AKDF++KLLVK+ R RLT  +AL H
Sbjct: 214 GASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRH 273

Query: 223 PWVREGGDASEI--PIDISVLNNMRQFVKYSRLKQFALRALAST 264
           PW+    +   +     +  L N R+     R K  +   ++  
Sbjct: 274 PWITPVDNQQAMVRRESVVNLENFRKQYVRRRWKL-SFSIVSLC 316

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7 Length = 387

 Score =  305 bits (784), Expect = e-101
 Identities = 80/245 (32%), Positives = 123/245 (50%), Gaps = 7/245 (2%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
              GGEL DRI A+ D + +E +    +RQ        H H +VH D+KPEN + ++ K+
Sbjct: 129 FLSGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCET-KK 186

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCG 163
            SS+K  DFGL+  + P +  +    +A + APE++ R+  G  +D+W+IGV+ Y+LL G
Sbjct: 187 ASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 246

Query: 164 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 223
             PF  + +    + V R   +F    + S+S  AKDF+K LL K+PR RLT   AL HP
Sbjct: 247 LSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHP 306

Query: 224 WVREGGDASEIPIDISVLNNMRQFVKYSRLKQF----ALRALASTLDDEELADLRDQFDA 279
           W++         I  S  N +RQ +K           A+  +A+     +      Q   
Sbjct: 307 WLKGDHSNLTSRIPSSRYNKIRQKIKEKYADWPAPQPAIGRIANFSSLRKHRPQEYQIYD 366

Query: 280 IDVDK 284
              D+
Sbjct: 367 SYFDR 371

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ... Length = 283

 Score =  301 bits (773), Expect = e-101
 Identities = 71/195 (36%), Positives = 110/195 (56%), Gaps = 4/195 (2%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS-AK 103
           L  GGEL D +  K+    TE +A   ++Q+L      H   + H D+KPEN +      
Sbjct: 89  LVSGGELFDFLAEKE--SLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNV 146

Query: 104 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC 162
            +  +K  DFG++  I+ G +F++I G+  +VAPE++  +  G E+D+WSIGVITYILL 
Sbjct: 147 PNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 206

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           G  PF  +T+      +     DF  + + + S  AKDF+++LLVKDP+ R+T AQ+L H
Sbjct: 207 GASPFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEH 266

Query: 223 PWVREGGDASEIPID 237
            W++     +    D
Sbjct: 267 SWIKAIRRRNVRGED 281

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A* Length = 299

 Score =  300 bits (770), Expect = e-100
 Identities = 62/223 (27%), Positives = 104/223 (46%), Gaps = 25/223 (11%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
             +GGEL  RI  + D  +TE++A+ +++ +       H   + HRD+KPEN L+ S + 
Sbjct: 96  CLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRP 155

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGR 164
           ++ LK TDFG                     A E    K     D+WS+GVI YILLCG 
Sbjct: 156 NAILKLTDFGF--------------------AKETTGEKYDKSCDMWSLGVIMYILLCGY 195

Query: 165 RPFWDK----TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
            PF+         G+   +   + +F    W  +S   K  ++ LL  +P  R+T  + +
Sbjct: 196 PPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFM 255

Query: 221 SHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALAS 263
           +HPW+ +     + P+  S +    +  ++  +K+    ALA+
Sbjct: 256 NHPWIMQSTKVPQTPLHTSRVLKEDKE-RWEDVKEEMTSALAT 297

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens} Length = 373

 Score =  296 bits (761), Expect = 6e-98
 Identities = 65/208 (31%), Positives = 110/208 (52%), Gaps = 5/208 (2%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
             +GGEL DRI+ +     TE D  + ++Q+       H   ++H D+KPEN L  + ++
Sbjct: 167 YVDGGELFDRIIDE-SYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVN-RD 224

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCG 163
              +K  DFGL+   KP +K +   G+  ++APEV+        +D+WS+GVI Y+LL G
Sbjct: 225 AKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG 284

Query: 164 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 223
             PF    +      +L  + D   + +  IS  AK+F+ KLL+K+   R++A++AL HP
Sbjct: 285 LSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHP 344

Query: 224 WVREGGDASEIPIDI--SVLNNMRQFVK 249
           W+ +    S +      +  ++ + FV 
Sbjct: 345 WLSDHKLHSRLSAQKKKNRGSDAQDFVT 372

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A* Length = 322

 Score =  293 bits (751), Expect = 4e-97
 Identities = 77/230 (33%), Positives = 115/230 (50%), Gaps = 13/230 (5%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L EGGEL D+++  K  R  E    +   QML      H +G++HRD+KPEN L  S +E
Sbjct: 95  LMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEE 152

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYIL 160
           D  +K TDFG S  +      + + G+  Y+APEVL            D WS+GVI +I 
Sbjct: 153 DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 212

Query: 161 LCGRRPFWD-KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA 219
           L G  PF + +T+  +  ++   K +F  + W  +S  A D VKKLLV DP+AR T  +A
Sbjct: 213 LSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEA 272

Query: 220 LSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEE 269
           L HPW+++        +     + + +  + + L Q   +   S     E
Sbjct: 273 LRHPWLQDE------DMKRKFQDLLSEENESTALPQVLAQPSTSRKRPRE 316

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A Length = 342

 Score =  292 bits (749), Expect = 2e-96
 Identities = 71/233 (30%), Positives = 117/233 (50%), Gaps = 14/233 (6%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L +GGELLD+IL +K   ++E++A+ V+  + +     H  G+VHRD+KP N L+     
Sbjct: 97  LMKGGELLDKILRQK--FFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESG 154

Query: 105 D-SSLKATDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILL 161
           +  S++  DFG +  ++           +A +VAPEVL+R+      D+WS+GV+ Y +L
Sbjct: 155 NPESIRICDFGFAKQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTML 214

Query: 162 CGRRPFW---DKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 218
            G  PF    D T + I   +   K       W S+S++AKD V K+L  DP  RLTAA 
Sbjct: 215 TGYTPFANGPDDTPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAAL 274

Query: 219 ALSHPWVREGGDASEIPIDISVLNNMRQ------FVKYSRLKQFALRALASTL 265
            L HPW+       +  ++     ++ +      +   +R +   L  +  + 
Sbjct: 275 VLRHPWIVHWDQLPQYQLNRQDAPHLVKGAMAATYSALNRNQSPVLEPVGRST 327

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A Length = 316

 Score =  291 bits (746), Expect = 2e-96
 Identities = 77/222 (34%), Positives = 109/222 (49%), Gaps = 33/222 (14%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
              GG +L  I  ++   + E +A+VVV+ +       H  G+ HRD+KPEN L +   +
Sbjct: 92  KMRGGSILSHIHKRR--HFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQ 149

Query: 105 DSSLKATDFGLSDFIKPGKKFQDI--------VGSAYYVAPEVLKRKS------GPESDV 150
            S +K  DF L   IK       I         GSA Y+APEV++  S          D+
Sbjct: 150 VSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDL 209

Query: 151 WSIGVITYILLCGRRPFWDK---------------TEDGIFKEVLRNKPDFRRKPWPSIS 195
           WS+GVI YILL G  PF  +                ++ +F+ +   K +F  K W  IS
Sbjct: 210 WSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHIS 269

Query: 196 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPID 237
            +AKD + KLLV+D + RL+AAQ L HPWV+  G A E  + 
Sbjct: 270 CAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ--GCAPENTLP 309

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II} Length = 345

 Score =  272 bits (698), Expect = 5e-89
 Identities = 67/235 (28%), Positives = 95/235 (40%), Gaps = 47/235 (20%)

Query: 45  LCEGGELLDRILAKK--------------------------------------DSRYTEK 66
           LC GG LLD++                                          D    EK
Sbjct: 109 LCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREK 168

Query: 67  DAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK--- 123
             + ++RQ+       H  G+ HRD+KPENFLF +  +   +K  DFGLS          
Sbjct: 169 LISNIMRQIFSALHYLHNQGICHRDIKPENFLFST-NKSFEIKLVDFGLSKEFYKLNNGE 227

Query: 124 --KFQDIVGSAYYVAPEVLK---RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE 178
                   G+ Y+VAPEVL       GP+ D WS GV+ ++LL G  PF    +     +
Sbjct: 228 YYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQ 287

Query: 179 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASE 233
           VL  K  F    +  +S  A+D +  LL ++   R  A +AL HPW+ +  D   
Sbjct: 288 VLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSDKIY 342

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A Length = 419

 Score =  274 bits (702), Expect = 2e-88
 Identities = 73/195 (37%), Positives = 105/195 (53%), Gaps = 7/195 (3%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L EGGEL D+++  K  R  E    +   QML      H +G++HRD+KPEN L  S +E
Sbjct: 220 LMEGGELFDKVVGNK--RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEE 277

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYIL 160
           D  +K TDFG S  +      + + G+  Y+APEVL            D WS+GVI +I 
Sbjct: 278 DCLIKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFIC 337

Query: 161 LCGRRPFWD-KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA 219
           L G  PF + +T+  +  ++   K +F  + W  +S  A D VKKLLV DP+AR T  +A
Sbjct: 338 LSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEA 397

Query: 220 LSHPWVREGGDASEI 234
           L HPW+++     + 
Sbjct: 398 LRHPWLQDEDMKRKF 412

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens} Length = 432

 Score =  256 bits (656), Expect = 2e-81
 Identities = 63/346 (18%), Positives = 122/346 (35%), Gaps = 30/346 (8%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           LC    L + +  +KD  +   +   +++Q     A  H   +VHRD+KP N L      
Sbjct: 99  LC-AATLQEYVE-QKDFAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNA 156

Query: 105 DSSLKA--TDFGLSDFIKPGK----KFQDIVGSAYYVAPEVLKRKS----GPESDVWSIG 154
              +KA  +DFGL   +  G+    +   + G+  ++APE+L            D++S G
Sbjct: 157 HGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAG 216

Query: 155 VITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 214
            + Y ++      + K+       +L         P       A++ ++K++  DP+ R 
Sbjct: 217 CVFYYVISEGSHPFGKSLQRQANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRP 276

Query: 215 TAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLR 274
           +A   L HP+        +   D+S        ++   L    ++ L          D R
Sbjct: 277 SAKHVLKHPFFWSLEKQLQFFQDVS------DRIEKESLDGPIVKQLERGGRAVVKMDWR 330

Query: 275 DQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR------VLEILQAIDCNTDGLVDF- 327
           +                  +    +DL   ++  +        E+ + +    D  V + 
Sbjct: 331 ENITVPLQTDLR--KFRTYKGGSVRDLLRAMRNKKHHYRELPAEVRETLGTLPDDFVCYF 388

Query: 328 -SEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEEL 372
            S F     H ++  E          Q  +     +    +TP+ L
Sbjct: 389 TSRFPHLLAHTYRAMEL--CSHERLFQPYYFHEPPEPQPPVTPDAL 432

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A* Length = 434

 Score =  223 bits (571), Expect = 6e-69
 Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 33/226 (14%)

Query: 45  LCEGGELLDRILAKKDS-----RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 99
           LC    L D + +K  S        E +   ++RQ+    A  H   ++HRD+KP+N L 
Sbjct: 90  LC-NLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILV 148

Query: 100 KSAK----------EDSSLKATDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVL---- 140
            ++           E+  +  +DFGL   +  G+        +  G++ + APE+L    
Sbjct: 149 STSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESN 208

Query: 141 ----KRKSGPESDVWSIGVITYILLC-GRRPFWDK--TEDGIFKEVLRNKPDFRRKPWPS 193
               KR+     D++S+G + Y +L  G+ PF DK   E  I + +  +  + +     S
Sbjct: 209 NLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIF-SLDEMKCLHDRS 267

Query: 194 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDIS 239
           +   A D + +++  DP  R TA + L HP         E  + +S
Sbjct: 268 LIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPKSKKLEFLLKVS 313

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1} Length = 197

 Score =  207 bits (530), Expect = 1e-65
 Identities = 58/199 (29%), Positives = 101/199 (50%), Gaps = 16/199 (8%)

Query: 218 QALSHPWVRE-GGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQ 276
               H   RE       + +  ++L N++ F K + LK+ AL  +A  L D E+ +LR+ 
Sbjct: 3   HHHHHSSGRENLYFQGHVELSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNI 62

Query: 277 FDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 336
           F A+DVD +G++S +E+   L K + ++     + ++L+ ID N  G + +++F+AAT+ 
Sbjct: 63  FIALDVDNSGTLSSQEILDGL-KKIGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATID 121

Query: 337 VHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG--------SIDPLLEE 388
                + +           F+ FDID +G I+ EEL+   G           +ID LL+E
Sbjct: 122 KQTYLKKE----VCL--IPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQE 175

Query: 389 ADIDKDGRISLSEFRRLLR 407
            D++ DG I   EF  ++ 
Sbjct: 176 VDLNGDGEIDFHEFMLMMS 194

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A Length = 191

 Score =  200 bits (512), Expect = 4e-63
 Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 20/199 (10%)

Query: 220 LSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDA 279
           + H      G  +     I VL N + +    + ++ A+  +A   +D ++  L+  F  
Sbjct: 1   MHHHHHHSSGRENLYFQGIHVLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLV 60

Query: 280 IDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ 339
           +D D  G I+ E++++ L K    KL  +    +L  ID +  G +D++EF+AA L   Q
Sbjct: 61  LDEDGKGYITKEQLKKGLEK-DGLKLPYN-FDLLLDQIDSDGSGKIDYTEFIAAALDRKQ 118

Query: 340 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS--------IDPLLEE 388
           L +       +    AF  FD+D DG IT  EL     +   KG+        +  ++ +
Sbjct: 119 LSKK-----LIY--CAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRD 171

Query: 389 ADIDKDGRISLSEFRRLLR 407
            D + DG+I   EF  +++
Sbjct: 172 VDKNNDGKIDFHEFSEMMK 190

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens} Length = 319

 Score =  188 bits (479), Expect = 1e-56
 Identities = 42/216 (19%), Positives = 76/216 (35%), Gaps = 36/216 (16%)

Query: 45  LCEGGELLDRILAK-KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 103
            C  G L   +          E +  +V+R ++        +G+VHR++KP N +    +
Sbjct: 90  FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGE 149

Query: 104 -EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS---------GPESDVWSI 153
              S  K TDFG +  ++  ++F  + G+  Y+ P++ +R           G   D+WSI
Sbjct: 150 DGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSI 209

Query: 154 GVITYILLCGRRPFWD----KTEDGIFKEVLRNKP-----------------DFRRKPWP 192
           GV  Y    G  PF      +    +  +++  KP                         
Sbjct: 210 GVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSC 269

Query: 193 SISNSAKD----FVKKLLVKDPRARLTAAQALSHPW 224
           S+S   +      +  +L  D        Q  +   
Sbjct: 270 SLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS 305

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A* Length = 313

 Score =  187 bits (478), Expect = 2e-56
 Identities = 54/198 (27%), Positives = 86/198 (43%), Gaps = 26/198 (13%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
           C   +L   +  KK       +     + ML      H HG+VH D+KP NFL      D
Sbjct: 109 CGNIDLNSWL--KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----D 162

Query: 106 SSLKATDFGLSDFIKPGKKFQD---IVGSAYYVAPEVLKRKS------------GPESDV 150
             LK  DFG+++ ++P          VG+  Y+ PE +K  S             P+SDV
Sbjct: 163 GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDV 222

Query: 151 WSIGVITYILLCGRRPFWDKTE--DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVK 208
           WS+G I Y +  G+ PF         +   +    P+   +         +D +K  L +
Sbjct: 223 WSLGCILYYMTYGKTPFQQIINQISKLHAII---DPNHEIEFPDIPEKDLQDVLKCCLKR 279

Query: 209 DPRARLTAAQALSHPWVR 226
           DP+ R++  + L+HP+V+
Sbjct: 280 DPKQRISIPELLAHPYVQ 297

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens} Length = 343

 Score =  187 bits (476), Expect = 8e-56
 Identities = 59/254 (23%), Positives = 98/254 (38%), Gaps = 33/254 (12%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
           C   +L   +  KK       +     + ML      H HG+VH D+KP NFL      D
Sbjct: 90  CGNIDLNSWL--KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----D 143

Query: 106 SSLKATDFGLSDFIKPGKKFQD---IVGSAYYVAPEVLKRKS------------GPESDV 150
             LK  DFG+++ ++P          VG+  Y+ PE +K  S             P+SDV
Sbjct: 144 GMLKLIDFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDV 203

Query: 151 WSIGVITYILLCGRRPFWDKTE--DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVK 208
           WS+G I Y +  G+ PF         +   +    P+   +         +D +K  L +
Sbjct: 204 WSLGCILYYMTYGKTPFQQIINQISKLHAII---DPNHEIEFPDIPEKDLQDVLKCCLKR 260

Query: 209 DPRARLTAAQALSHPWVREGGDASEIPIDIS------VLNNMRQFVKYSRLKQFALRALA 262
           DP+ R++  + L+HP+V+            +      VL  +      + + + A + L 
Sbjct: 261 DPKQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSPNSILK-AAKTLY 319

Query: 263 STLDDEELADLRDQ 276
                 E  +    
Sbjct: 320 EHYSGGESHNSSSS 333

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score =  186 bits (474), Expect = 2e-55
 Identities = 36/191 (18%), Positives = 57/191 (29%), Gaps = 14/191 (7%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L      LD +   +          ++  Q++R+AA     GLVH    P+N        
Sbjct: 174 LELLFSTLDFVYVFR-GDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIM---P 229

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS---GPESDVWSIGVITYILL 161
           D  L   D       K G +         Y   E L   +       + W +G+  Y + 
Sbjct: 230 DGRLMLGDVSAL--WKVGTRGPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVW 287

Query: 162 CGRRPFWDKTEDGIFKEVL-----RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA 216
           C   PF   T                           + +  K  + + L  D R RL  
Sbjct: 288 CLFLPFGLVTPGIKGSWKRPSLRVPGTDSLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLP 347

Query: 217 AQALSHPWVRE 227
            +A+  P   +
Sbjct: 348 LEAMETPEFLQ 358

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana} Length = 166

 Score =  179 bits (456), Expect = 4e-55
 Identities = 69/172 (40%), Positives = 108/172 (62%), Gaps = 11/172 (6%)

Query: 245 RQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWK 304
           +QF   ++ K+ ALR +A +L +EE+A L++ F+ ID DK+G I+ EE++  L K +   
Sbjct: 1   KQFSAMNKFKKMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGL-KRVGAN 59

Query: 305 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRD 364
           LKES +L+++QA D +  G +D+ EF+AATLH++++E  D    HL   AAF  FD D  
Sbjct: 60  LKESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIERED----HLF--AAFTYFDKDGS 113

Query: 365 GFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTASIS 412
           G+ITP+EL+      G     I+ L+ + D D DGRI  +EF  +++  SI+
Sbjct: 114 GYITPDELQQACEEFGVEDVRIEELMRDVDQDNDGRIDYNEFVAMMQKGSIT 165

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score =  183 bits (466), Expect = 8e-55
 Identities = 47/202 (23%), Positives = 80/202 (39%), Gaps = 25/202 (12%)

Query: 45  LCEGGELLDRILAKKDSRYTEKD-AAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 103
            CE G L D I    ++   ++D    + RQ+L   +  H  G++HRD+KP N       
Sbjct: 96  YCENGTLYDLI--HSENLNQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFID--- 150

Query: 104 EDSSLKATDFGLS---------------DFIKPGKKFQDIVGSAYYVAPEVLKRKS--GP 146
           E  ++K  DFGL+               +           +G+A YVA EVL        
Sbjct: 151 ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNE 210

Query: 147 ESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL 206
           + D++S+G+I + ++             I K++     +F      +     K  ++ L+
Sbjct: 211 KIDMYSLGIIFFEMIYP--FSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLI 268

Query: 207 VKDPRARLTAAQALSHPWVREG 228
             DP  R  A   L+  W+   
Sbjct: 269 DHDPNKRPGARTLLNSGWLPVK 290

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum} Length = 180

 Score =  178 bits (454), Expect = 1e-54
 Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 24/187 (12%)

Query: 236 IDISVLNNMRQFVKYSRLKQFALRALASTLD--DEELADLRDQFDAIDVDKNGSISLEEM 293
           I  +VLNNM+ ++K+S ++   +  +A  L   +  +  + + F  +D + NGS+S  E+
Sbjct: 2   ISPNVLNNMKSYMKHSNIRNIIINIMAHELSVINNHIKYINELFYKLDTNHNGSLSHREI 61

Query: 294 RQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQ 353
              LA      +K+  +  ILQA+D N  G + ++EF+A       +E        L+  
Sbjct: 62  YTVLAS---VGIKKWDINRILQALDINDRGNITYTEFMAGCYRWKNIEST-----FLK-- 111

Query: 354 AAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDG--------RISLSE 401
           AAF K D D DG+I+  ++      K      ID         K G        +IS  E
Sbjct: 112 AAFNKIDKDEDGYISKSDIVSLVHDKVLDNNDIDNFFLSVHSIKKGIPREHIINKISFQE 171

Query: 402 FRRLLRT 408
           F+  + +
Sbjct: 172 FKDYMLS 178

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii} Length = 191

 Score =  178 bits (454), Expect = 2e-54
 Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 21/189 (11%)

Query: 235 PIDISVLNNMRQFVKYSRLKQFALRALASTL-DDEELADLRDQFDAIDVDKNGSISLEEM 293
                 L NM++F    +L Q A+  + S L   EE  +L   F  +D + +G +  +E+
Sbjct: 3   HALTGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKEL 62

Query: 294 RQALAKDLPW----------KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 343
            +   K + W             E+ V  ILQ++D + +G +++SEFV   +    L   
Sbjct: 63  IEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSR 122

Query: 344 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISL 399
           +     L   AAF++FD D  G IT EEL    G+      +   +L+E D + DG +  
Sbjct: 123 E----RLL--AAFQQFDSDGSGKITNEELGRLFGVTEVDDETWHQVLQECDKNNDGEVDF 176

Query: 400 SEFRRLLRT 408
            EF  +++ 
Sbjct: 177 EEFVEMMQK 185

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A* Length = 390

 Score =  181 bits (462), Expect = 2e-53
 Identities = 61/252 (24%), Positives = 98/252 (38%), Gaps = 29/252 (11%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
           C   +L   +  KK       +     + ML      H HG+VH D+KP NFL      D
Sbjct: 137 CGNIDLNSWL--KKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----D 190

Query: 106 SSLKATDFGLSDFIKPGKKFQD---IVGSAYYVAPEVLKRKS------------GPESDV 150
             LK  DFG+++ ++P          VG+  Y+ PE +K  S             P+SDV
Sbjct: 191 GMLKLIDFGIANQMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDV 250

Query: 151 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDP 210
           WS+G I Y +  G+ PF       I K      P+   +         +D +K  L +DP
Sbjct: 251 WSLGCILYYMTYGKTPFQQIINQ-ISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDP 309

Query: 211 RARLTAAQALSHPWVREGGDASEIPIDIS------VLNNMRQFVKYSRLKQFALRALAST 264
           + R++  + L+HP+V+            +      VL  +      + + + A + L   
Sbjct: 310 KQRISIPELLAHPYVQIQTHPVNQMAKGTTEEMKYVLGQLVGLNSPNSILK-AAKTLYEH 368

Query: 265 LDDEELADLRDQ 276
               E  +    
Sbjct: 369 YSGGESHNSSSS 380

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A Length = 328

 Score =  175 bits (447), Expect = 9e-52
 Identities = 67/214 (31%), Positives = 100/214 (46%), Gaps = 20/214 (9%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
              GGE+ D ++A    R  EK+A    RQ++     CH   +VHRD+K EN L      
Sbjct: 95  YASGGEVFDYLVAHG--RMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLD---A 149

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLC 162
           D ++K  DFG S+    G K     G+  Y APE+ + K   GPE DVWS+GVI Y L+ 
Sbjct: 150 DMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVS 209

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           G  PF  +    + + VLR    +R   +  +S   ++ +K+ LV +P  R T  Q +  
Sbjct: 210 GSLPFDGQNLKELRERVLR--GKYRIPFY--MSTDCENLLKRFLVLNPIKRGTLEQIMKD 265

Query: 223 PWVREGGDASEIP---------IDISVLNNMRQF 247
            W+  G +  E+           D   ++ M   
Sbjct: 266 RWINAGHEEDELKPFVEPELDISDQKRIDIMVGM 299

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens} Length = 396

 Score =  176 bits (448), Expect = 3e-51
 Identities = 42/216 (19%), Positives = 76/216 (35%), Gaps = 36/216 (16%)

Query: 45  LCEGGELLDRILAK-KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 103
            C  G L   +          E +  +V+R ++        +G+VHR++KP N +    +
Sbjct: 90  FCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGE 149

Query: 104 -EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS---------GPESDVWSI 153
              S  K TDFG +  ++  ++F  + G+  Y+ P++ +R           G   D+WSI
Sbjct: 150 DGQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSI 209

Query: 154 GVITYILLCGRRPFWD----KTEDGIFKEVLRNKP-----------------DFRRKPWP 192
           GV  Y    G  PF      +    +  +++  KP                         
Sbjct: 210 GVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSC 269

Query: 193 SISNSAKD----FVKKLLVKDPRARLTAAQALSHPW 224
           S+S   +      +  +L  D        Q  +   
Sbjct: 270 SLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS 305

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A* Length = 294

 Score =  172 bits (438), Expect = 1e-50
 Identities = 61/195 (31%), Positives = 97/195 (49%), Gaps = 13/195 (6%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           LC    LL+    +K    TE +A   +RQ++      H + ++HRD+K  N       E
Sbjct: 96  LCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN---E 150

Query: 105 DSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC 162
           D  +K  DFGL+  ++  G++ + + G+  Y+APEVL +K    E DVWSIG I Y LL 
Sbjct: 151 DLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 210

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALS 221
           G+ PF        +  + +N  ++     P  I+  A   ++K+L  DP AR T  + L+
Sbjct: 211 GKPPFETSCLKETYLRIKKN--EYS---IPKHINPVAASLIQKMLQTDPTARPTINELLN 265

Query: 222 HPWVREGGDASEIPI 236
             +   G   + +PI
Sbjct: 266 DEFFTSGYIPARLPI 280

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A Length = 377

 Score =  174 bits (442), Expect = 1e-50
 Identities = 34/203 (16%), Positives = 67/203 (33%), Gaps = 30/203 (14%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           G  LL                  +  Q++R+ A  H +GLVH  ++P + +     +   
Sbjct: 190 GEVLLSHS--STHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLD---QRGG 244

Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS------------GPESDVWSIGV 155
           +  T F                 S  +  PE+  R++                D W++G+
Sbjct: 245 VFLTGFEHL---VRDGARVVSSVSRGFEPPELEARRATISYHRDRRTLMTFSFDAWALGL 301

Query: 156 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 215
           + Y + C   P       G  + + R+  +        I    +  ++  L      RL 
Sbjct: 302 VIYWIWCADLPITKDAALGGSEWIFRSCKN--------IPQPVRALLEGFLRYPKEDRLL 353

Query: 216 AAQALSHPWVREGGD--ASEIPI 236
             QA+  P   +     ++ +P+
Sbjct: 354 PLQAMETPEYEQLRTELSAALPL 376

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens} Length = 278

 Score =  170 bits (434), Expect = 2e-50
 Identities = 58/186 (31%), Positives = 95/186 (51%), Gaps = 10/186 (5%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           +C  GE+    L  +   ++E +A   + Q++      H HG++HRD+   N L      
Sbjct: 92  MCHNGEMNRY-LKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMN 150

Query: 105 DSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC 162
              +K  DFGL+  +K P +K   + G+  Y++PE+  R + G ESDVWS+G + Y LL 
Sbjct: 151 ---IKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLI 207

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           GR PF   T      +V+    D+    +  +S  AKD + +LL ++P  RL+ +  L H
Sbjct: 208 GRPPFDTDTVKNTLNKVVLA--DYEMPSF--LSIEAKDLIHQLLRRNPADRLSLSSVLDH 263

Query: 223 PWVREG 228
           P++   
Sbjct: 264 PFMSRN 269

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A* Length = 276

 Score =  170 bits (432), Expect = 4e-50
 Identities = 65/185 (35%), Positives = 91/185 (49%), Gaps = 11/185 (5%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
             GGEL D I      R  E +A  + +Q+L     CH H +VHRD+KPEN L       
Sbjct: 93  VSGGELFDYICKHG--RVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLD---AH 147

Query: 106 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCG 163
            + K  DFGLS+ +  G+  +   GS  Y APEV+  +  +GPE D+WS GVI Y LLCG
Sbjct: 148 MNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCG 207

Query: 164 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 223
             PF D+    +FK++      F    +  ++ S    +  +L  DP  R T      H 
Sbjct: 208 TLPFDDEHVPTLFKKIRGG--VFYIPEY--LNRSVATLLMHMLQVDPLKRATIKDIREHE 263

Query: 224 WVREG 228
           W ++ 
Sbjct: 264 WFKQD 268

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A* Length = 335

 Score =  171 bits (436), Expect = 4e-50
 Identities = 61/195 (31%), Positives = 97/195 (49%), Gaps = 13/195 (6%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           LC    LL+    +K    TE +A   +RQ++      H + ++HRD+K  N       E
Sbjct: 122 LCRRRSLLELHKRRK--ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN---E 176

Query: 105 DSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC 162
           D  +K  DFGL+  ++  G++ + + G+  Y+APEVL +K    E DVWSIG I Y LL 
Sbjct: 177 DLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 236

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALS 221
           G+ PF        +  + +N  ++     P  I+  A   ++K+L  DP AR T  + L+
Sbjct: 237 GKPPFETSCLKETYLRIKKN--EYS---IPKHINPVAASLIQKMLQTDPTARPTINELLN 291

Query: 222 HPWVREGGDASEIPI 236
             +   G   + +PI
Sbjct: 292 DEFFTSGYIPARLPI 306

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe} Length = 336

 Score =  171 bits (436), Expect = 5e-50
 Identities = 69/215 (32%), Positives = 110/215 (51%), Gaps = 19/215 (8%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GGEL D I+ KK  R TE +     +Q++     CH H +VHRD+KPEN L     ++ +
Sbjct: 92  GGELFDYIVEKK--RMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLD---DNLN 146

Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRR 165
           +K  DFGLS+ +  G   +   GS  Y APEV+  K  +GPE DVWS G++ Y++L GR 
Sbjct: 147 VKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRL 206

Query: 166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           PF D+    +FK+V      +    +  +S  A+  +++++V DP  R+T  +    PW 
Sbjct: 207 PFDDEFIPNLFKKVNSCV--YVMPDF--LSPGAQSLIRRMIVADPMQRITIQEIRRDPWF 262

Query: 226 REGGDASEIP--------IDISVLNNMRQFVKYSR 252
                    P         D  +++ + + + +S 
Sbjct: 263 NVNLPDYLRPMEEVQGSYADSRIVSKLGEAMGFSE 297

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ... Length = 276

 Score =  167 bits (426), Expect = 3e-49
 Identities = 57/189 (30%), Positives = 87/189 (46%), Gaps = 13/189 (6%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
           C GGEL DRI         E DA     Q++      H  G+ HRD+KPEN L     E 
Sbjct: 87  CSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ER 141

Query: 106 SSLKATDFGLSDFIKPGKKFQDI---VGSAYYVAPEVLKRK--SGPESDVWSIGVITYIL 160
            +LK +DFGL+   +   + + +    G+  YVAPE+LKR+       DVWS G++   +
Sbjct: 142 DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 201

Query: 161 LCGRRPFWDKTED-GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA 219
           L G  P+   ++    + +           PW  I ++    + K+LV++P AR+T    
Sbjct: 202 LAGELPWDQPSDSCQEYSDWKEK--KTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 259

Query: 220 LSHPWVREG 228
               W  + 
Sbjct: 260 KKDRWYNKP 268

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A* Length = 676

 Score =  176 bits (447), Expect = 4e-49
 Identities = 43/229 (18%), Positives = 87/229 (37%), Gaps = 23/229 (10%)

Query: 45  LCEGGELLDRILAK-KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 103
            CEGG+L   +          E     ++  +       H + ++HRD+KPEN + +   
Sbjct: 99  YCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGP 158

Query: 104 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC 162
           +    K  D G +  +  G+   + VG+  Y+APE+L++K      D WS G + +  + 
Sbjct: 159 QRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECIT 218

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS--------------------AKDFV 202
           G RPF    +   +   +R K +     +  ++ +                     + ++
Sbjct: 219 GFRPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWL 278

Query: 203 KKLLVKDPRARLTAAQALSHPWVREGGDA-SEIPIDISVLNNMRQFVKY 250
           + +L+   R R T  Q  +    +      S   + +  + + R     
Sbjct: 279 QCMLMWHQRQRGTDPQNPNVGCFQALDSILSLKLLSVMNMVSGRVHTYP 327

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens} Length = 335

 Score =  169 bits (429), Expect = 5e-49
 Identities = 53/194 (27%), Positives = 85/194 (43%), Gaps = 17/194 (8%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
             G +L   I      R  E  A+ + RQ++       L  ++HRD+K EN +     ED
Sbjct: 112 GSGLDLFAFIDRHP--RLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIA---ED 166

Query: 106 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCG 163
            ++K  DFG + +++ GK F    G+  Y APEVL      GPE ++WS+GV  Y L+  
Sbjct: 167 FTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFE 226

Query: 164 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 223
             PF +       +E +             +S      V  LL   P  R T  + ++ P
Sbjct: 227 ENPFCE------LEETVEAA--IHPPYL--VSKELMSLVSGLLQPVPERRTTLEKLVTDP 276

Query: 224 WVREGGDASEIPID 237
           WV +  + ++   +
Sbjct: 277 WVTQPVNLADYTWE 290

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323

 Score =  166 bits (423), Expect = 2e-48
 Identities = 46/230 (20%), Positives = 85/230 (36%), Gaps = 31/230 (13%)

Query: 187 RRKPWPSISNSAKDFVKKLLVKDPR------ARLTAAQALSHPWVREGGDASEIPIDISV 240
           R +    I+   ++   KL   D +      AR  A +            A +  +   +
Sbjct: 39  RDRLEAQIAQKEQEQKAKLAEYDQKVQNEFDARERAEREREAAR--GDAAAEKQRLASLL 96

Query: 241 LNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKD 300
            +       Y+RL+          L +E+   LR  F +  V  +G  S ++++Q LAK 
Sbjct: 97  KDLEDDASGYNRLRPSK-----PMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAK- 150

Query: 301 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFD 360
               + E  + ++   ++ +T G + +   VA    +  L             A F K D
Sbjct: 151 YADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLAAL------------VADFRKID 198

Query: 361 IDRDGFITPEELR-----MHTGLKGSIDPLLEEADIDKDGRISLSEFRRL 405
            + +G ++ +E R     +    K   D L   AD D+   +  SE+  L
Sbjct: 199 TNSNGTLSRKEFREHFVRLGFDKKSVQDALFRYADEDESDDVGFSEYVHL 248

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A Length = 323

 Score = 60.6 bits (147), Expect = 2e-10
 Identities = 16/72 (22%), Positives = 30/72 (41%)

Query: 270 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSE 329
           L  LR  +   D DK+G +S EE+++ L      +    +       +D +    + + E
Sbjct: 252 LLVLRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQE 311

Query: 330 FVAATLHVHQLE 341
           FV   L +   +
Sbjct: 312 FVMLVLLMFHDD 323

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A* Length = 323

 Score =  166 bits (423), Expect = 2e-48
 Identities = 60/237 (25%), Positives = 95/237 (40%), Gaps = 13/237 (5%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
           C GGEL DRI         E DA     Q++      H  G+ HRD+KPEN L     E 
Sbjct: 87  CSGGELFDRIEPDI--GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ER 141

Query: 106 SSLKATDFGLSDFIKPGKKFQDI---VGSAYYVAPEVLKRK--SGPESDVWSIGVITYIL 160
            +LK +DFGL+   +   + + +    G+  YVAPE+LKR+       DVWS G++   +
Sbjct: 142 DNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAM 201

Query: 161 LCGRRPFWDKTED-GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA 219
           L G  P+   ++    + +           PW  I ++    + K+LV++P AR+T    
Sbjct: 202 LAGELPWDQPSDSCQEYSDWKEK--KTYLNPWKKIDSAPLALLHKILVENPSARITIPDI 259

Query: 220 LSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQ 276
               W  +          ++          +S+  Q  L                 +
Sbjct: 260 KKDRWYNKPLKKGAKRPRVTSGGVSESPSGFSKHIQSNLDFSPVNSASRTPGSGWSK 316

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens} Length = 312

 Score =  166 bits (422), Expect = 3e-48
 Identities = 46/194 (23%), Positives = 76/194 (39%), Gaps = 17/194 (8%)

Query: 44  RLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 103
           R     +L D I  K      E  +     Q++     CH  G+VHRD+K EN L     
Sbjct: 119 RPLPAQDLFDYITEKG--PLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDL-- 174

Query: 104 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILL 161
                K  DFG    +     + D  G+  Y  PE + R       + VWS+G++ Y ++
Sbjct: 175 RRGCAKLIDFGSGALLHDEP-YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMV 233

Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 221
           CG  PF         +E+L    +        +S      +++ L   P +R +  + L 
Sbjct: 234 CGDIPFERD------QEILEA--ELHFPAH--VSPDCCALIRRCLAPKPSSRPSLEEILL 283

Query: 222 HPWVREGGDASEIP 235
            PW++   +   + 
Sbjct: 284 DPWMQTPAEDVPLN 297

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 3lau_A* 2wtv_A* ... Length = 279

 Score =  165 bits (420), Expect = 3e-48
 Identities = 52/185 (28%), Positives = 89/185 (48%), Gaps = 11/185 (5%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
               G +   +  +K S++ E+  A  + ++    + CH   ++HRD+KPEN L      
Sbjct: 90  YAPLGTVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---S 144

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCG 163
              LK  DFG S    P  +  D+ G+  Y+ PE+++ +    + D+WS+GV+ Y  L G
Sbjct: 145 AGELKIADFGWSVHA-PSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVG 203

Query: 164 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 223
           + PF   T    +K + R +  F   P   ++  A+D + +LL  +P  R    + L HP
Sbjct: 204 KPPFEANTYQETYKRISRVEFTF---P-DFVTEGARDLISRLLKHNPSQRPMLREVLEHP 259

Query: 224 WVREG 228
           W+   
Sbjct: 260 WITAN 264

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus} Length = 476

 Score =  169 bits (429), Expect = 8e-48
 Identities = 71/218 (32%), Positives = 100/218 (45%), Gaps = 20/218 (9%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
             GGEL D I      R  EK++  + +Q+L     CH H +VHRD+KPEN L       
Sbjct: 98  VSGGELFDYICKNG--RLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLD---AH 152

Query: 106 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCG 163
            + K  DFGLS+ +  G+  +   GS  Y APEV+  +  +GPE D+WS GVI Y LLCG
Sbjct: 153 MNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCG 212

Query: 164 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 223
             PF D     +FK++      F    +  ++ S    +K +L  DP  R T      H 
Sbjct: 213 TLPFDDDHVPTLFKKICDGI--FYTPQY--LNPSVISLLKHMLQVDPMKRATIKDIREHE 268

Query: 224 WVREGG---------DASEIPIDISVLNNMRQFVKYSR 252
           W ++             S   ID   L  + +  + S 
Sbjct: 269 WFKQDLPKYLFPEDPSYSSTMIDDEALKEVCEKFECSE 306

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A Length = 361

 Score =  165 bits (421), Expect = 1e-47
 Identities = 67/263 (25%), Positives = 111/263 (42%), Gaps = 23/263 (8%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
             GGEL +RI      R++E +A    +Q+L   + CH   + HRD+K EN L       
Sbjct: 98  ASGGELYERICNAG--RFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLL-DGSPA 154

Query: 106 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCG 163
             LK  DFG S       + +  VG+  Y+APEVL R+   G  +DVWS GV  Y++L G
Sbjct: 155 PRLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVG 214

Query: 164 RRPFWDKTEDGIFKEVLRN--KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 221
             PF D  E   +++ ++      +       IS      + ++ V DP  R++  +  +
Sbjct: 215 AYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKT 274

Query: 222 HPWVREGGDASEIPIDIS----------------VLNNMRQFVKYSRLKQFALRALASTL 265
           H W  +   A  +    +                ++  + +    +   +     +   L
Sbjct: 275 HSWFLKNLPADLMNESNTGSQFQEPEQPMQSLDTIMQIISEATIPAVRNRCLDDFMTDNL 334

Query: 266 DDEELADLRDQFDAIDVDKNGSI 288
           D ++  D  D    ID+D +G I
Sbjct: 335 DLDDDMDDFDSESEIDIDSSGEI 357

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ... Length = 284

 Score =  163 bits (415), Expect = 1e-47
 Identities = 55/196 (28%), Positives = 91/196 (46%), Gaps = 11/196 (5%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
              GEL   +  +K  R+ E+ +A  + ++      CH   ++HRD+KPEN L       
Sbjct: 96  APRGELYKEL--QKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMG---YK 150

Query: 106 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGR 164
             LK  DFG S    P  + + + G+  Y+ PE+++ K+   + D+W  GV+ Y  L G 
Sbjct: 151 GELKIADFGWS-VHAPSLRRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGM 209

Query: 165 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 224
            PF   +     + ++    D +  P+  +S+ +KD + KLL   P  RL     + HPW
Sbjct: 210 PPFDSPSHTETHRRIVNV--DLKFPPF--LSDGSKDLISKLLRYHPPQRLPLKGVMEHPW 265

Query: 225 VREGGDASEIPIDISV 240
           V+        P+  S 
Sbjct: 266 VKANSRRVLPPVYQST 281

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X* Length = 348

 Score =  165 bits (419), Expect = 2e-47
 Identities = 45/228 (19%), Positives = 86/228 (37%), Gaps = 30/228 (13%)

Query: 46  CEGGELLDRILAKK------DSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFL 98
            E   +L                   +    +++ +L   +  H    + HRD+KP N L
Sbjct: 125 MENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNIL 184

Query: 99  FKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK---SGPESDVWSIGV 155
                ++  +K +DFG S+     KK +   G+  ++ PE    +   +G + D+WS+G+
Sbjct: 185 MD---KNGRVKLSDFGESE-YMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGI 240

Query: 156 ITYILLCGRRPFWDK-TEDGIFKEVLRNKPDF---------------RRKPWPSISNSAK 199
             Y++     PF  K +   +F  +     ++                      +SN   
Sbjct: 241 CLYVMFYNVVPFSLKISLVELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDI 300

Query: 200 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQF 247
           DF+K  L K+P  R+T+  AL H W+ +            +    ++ 
Sbjct: 301 DFLKLFLRKNPAERITSEDALKHEWLADTNIEDLREFSKELYKKRKKL 348

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens} Length = 298

 Score =  162 bits (411), Expect = 8e-47
 Identities = 52/187 (27%), Positives = 87/187 (46%), Gaps = 13/187 (6%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L   G +++          +E  A    + +++     H   ++HRD+KP N L     E
Sbjct: 119 LVNQGPVMEVP---TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVG---E 172

Query: 105 DSSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYI 159
           D  +K  DFG+S+  K       + VG+  ++APE L    K  SG   DVW++GV  Y 
Sbjct: 173 DGHIKIADFGVSNEFKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYC 232

Query: 160 LLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA 219
            + G+ PF D+    +  ++     +F     P I+   KD + ++L K+P +R+   + 
Sbjct: 233 FVFGQCPFMDERIMCLHSKIKSQALEFPD--QPDIAEDLKDLITRMLDKNPESRIVVPEI 290

Query: 220 LSHPWVR 226
             HPWV 
Sbjct: 291 KLHPWVT 297

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ... Length = 320

 Score =  158 bits (402), Expect = 3e-45
 Identities = 49/190 (25%), Positives = 82/190 (43%), Gaps = 17/190 (8%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
             +L D I  +      E+ A     Q+L     CH  G++HRD+K EN L         
Sbjct: 133 VQDLFDFITERG--ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGE 188

Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRR 165
           LK  DFG    +K    + D  G+  Y  PE ++     G  + VWS+G++ Y ++CG  
Sbjct: 189 LKLIDFGSGALLKDTV-YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 247

Query: 166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
           PF         +E++R +     +    +S+  +  ++  L   P  R T  +  +HPW+
Sbjct: 248 PFEHD------EEIIRGQ--VFFRQR--VSSECQHLIRWCLALRPSDRPTFEEIQNHPWM 297

Query: 226 REGGDASEIP 235
           ++     E  
Sbjct: 298 QDVLLPQETA 307

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A* Length = 279

 Score =  155 bits (393), Expect = 2e-44
 Identities = 53/193 (27%), Positives = 88/193 (45%), Gaps = 19/193 (9%)

Query: 46  CEGGELLDRI--LAKKDSRYTEKDAAVVVRQMLRVAAECH-----LHGLVHRDMKPEN-F 97
           CEGG+L   I    K+     E+    V+ Q+     ECH      H ++HRD+KP N F
Sbjct: 89  CEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVF 148

Query: 98  LFKSAKEDSSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEVLKRKS-GPESDVWSIGV 155
           L        ++K  DFGL+  +     F +  VG+ YY++PE + R S   +SD+WS+G 
Sbjct: 149 LDG----KQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGC 204

Query: 156 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI-SNSAKDFVKKLLVKDPRARL 214
           + Y L     PF   ++  +  ++   K        P   S+   + + ++L      R 
Sbjct: 205 LLYELCALMPPFTAFSQKELAGKIREGKFR----RIPYRYSDELNEIITRMLNLKDYHRP 260

Query: 215 TAAQALSHPWVRE 227
           +  + L +P + E
Sbjct: 261 SVEEILENPLILE 273

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens} Length = 305

 Score =  153 bits (390), Expect = 1e-43
 Identities = 49/212 (23%), Positives = 82/212 (38%), Gaps = 18/212 (8%)

Query: 46  CEGG--ELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 103
           C  G  E+LD +  K   R+    A     Q++      H  G+VH+D+KP N L     
Sbjct: 90  CVCGMQEMLDSVPEK---RFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLT--- 143

Query: 104 EDSSLKATDFGLS---DFIKPGKKFQDIVGSAYYVAPEVL---KRKSGPESDVWSIGVIT 157
              +LK +  G++            +   GS  +  PE+       SG + D+WS GV  
Sbjct: 144 TGGTLKISALGVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTL 203

Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
           Y +  G  PF       +F+ + +    +             D +K +L  +P  R +  
Sbjct: 204 YNITTGLYPFEGDNIYKLFENIGKG--SYAIPGD--CGPPLSDLLKGMLEYEPAKRFSIR 259

Query: 218 QALSHPWVREGGDASEIPIDISVLNNMRQFVK 249
           Q   H W R+    +E P+ I    + +   +
Sbjct: 260 QIRQHSWFRKKHPPAEAPVPIPPSPDTKDRWR 291

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens} Length = 311

 Score =  149 bits (379), Expect = 5e-42
 Identities = 46/188 (24%), Positives = 69/188 (36%), Gaps = 20/188 (10%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           LC G  L         +   E      +R  L   A  H  GLVH D+KP N        
Sbjct: 138 LC-GPSLQQHC-EAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLG---P 192

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGR 164
               K  DFGL   +      +   G   Y+APE+L+   G  +DV+S+G+    + C  
Sbjct: 193 RGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNM 252

Query: 165 RPF-----WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA 219
                   W +   G                   +S+  +  +  +L  DP+ R TA   
Sbjct: 253 ELPHGGEGWQQLRQGYLPPEF----------TAGLSSELRSVLVMMLEPDPKLRATAEAL 302

Query: 220 LSHPWVRE 227
           L+ P +R+
Sbjct: 303 LALPVLRQ 310

>4apc_A Serine/threonine-protein kinase NEK1; transferase; 2.10A {Homo sapiens} Length = 350

 Score =  150 bits (381), Expect = 6e-42
 Identities = 51/218 (23%), Positives = 97/218 (44%), Gaps = 12/218 (5%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAKE 104
           CEGG+L  RI A+K   + E        Q+       H   ++HRD+K +N FL K    
Sbjct: 105 CEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTK---- 160

Query: 105 DSSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC 162
           D +++  DFG++  +    +  +  +G+ YY++PE+ + K    +SD+W++G + Y L  
Sbjct: 161 DGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCT 220

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDPRARLTAAQALS 221
            +  F   +   +  +++         P     S   +  V +L  ++PR R +    L 
Sbjct: 221 LKHAFEAGSMKNLVLKIISGSF----PPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276

Query: 222 HPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALR 259
             ++ +  +    P  I+    ++ F K+      A R
Sbjct: 277 KGFIAKRIEKFLSPQLIAEEFCLKTFSKFGSQPIPAKR 314

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B* Length = 284

 Score =  148 bits (376), Expect = 7e-42
 Identities = 43/185 (23%), Positives = 75/185 (40%), Gaps = 14/185 (7%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSAK 103
            C+ G L   I  ++  +  +  A  +  Q+ +     H   L++RD+KP N FL     
Sbjct: 101 FCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVD--- 157

Query: 104 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC 162
               +K  DFGL   +K   K     G+  Y++PE +  +  G E D++++G+I   LL 
Sbjct: 158 -TKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLH 216

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
                ++      F ++                   K  ++KLL K P  R   ++ L  
Sbjct: 217 VCDTAFET--SKFFTDLRDGIIS------DIFDKKEKTLLQKLLSKKPEDRPNTSEILRT 268

Query: 223 PWVRE 227
             V +
Sbjct: 269 LTVWK 273

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score =  147 bits (373), Expect = 2e-40
 Identities = 33/194 (17%), Positives = 67/194 (34%), Gaps = 25/194 (12%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAV--VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 103
                  + +L+   +  +    A   +  Q++R+ A  H +GLVH  ++P + +     
Sbjct: 189 SNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLD--- 245

Query: 104 EDSSLKATDFGLSDFIKPGKKFQDIVGSAY----YVAPEVL------KRKSGPESDVWSI 153
           +   +  T F     ++ G      +G  +      A  +L              D W++
Sbjct: 246 QRGGVFLTGFEHL--VRDGASAVSPIGRGFAPPETTAERMLPFGQHHPTLMTFAFDTWTL 303

Query: 154 GVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRAR 213
           G+  Y + C   P  D    G  + + R+  +        I    +  ++  L      R
Sbjct: 304 GLAIYWIWCADLPNTDDAALGGSEWIFRSCKN--------IPQPVRALLEGFLRYPKEDR 355

Query: 214 LTAAQALSHPWVRE 227
           L   QA+  P   +
Sbjct: 356 LLPLQAMETPEYEQ 369

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 188

 Score =  133 bits (337), Expect = 3e-37
 Identities = 51/151 (33%), Positives = 89/151 (58%), Gaps = 11/151 (7%)

Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 321
           A  L +EE+  L++ F  ID D +G+I+ +E++  L + +  +L ES + +++ A D + 
Sbjct: 1   AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKR-VGSELMESEIKDLMDAADIDK 59

Query: 322 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 378
            G +D+ EF+AAT+H+++LE  +    +L   +AF  FD D  G+IT +E++      GL
Sbjct: 60  SGTIDYGEFIAATVHLNKLEREE----NLV--SAFSYFDKDGSGYITLDEIQQACKDFGL 113

Query: 379 K-GSIDPLLEEADIDKDGRISLSEFRRLLRT 408
               ID +++E D D DG+I   EF  ++R 
Sbjct: 114 DDIHIDDMIKEIDQDNDGQIDYGEFAAMMRK 144

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 188

 Score = 67.2 bits (165), Expect = 3e-13
 Identities = 28/116 (24%), Positives = 48/116 (41%), Gaps = 11/116 (9%)

Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           L+ EE  +L   F   D D +G I+L+E++QA        L +  + ++++ ID + DG 
Sbjct: 78  LEREE--NLVSAFSYFDKDGSGYITLDEIQQACKDF---GLDDIHIDDMIKEIDQDNDGQ 132

Query: 325 VDFSEFVA----ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHT 376
           +D+ EF A       +         +  +LR   A    D   +  I       H 
Sbjct: 133 IDYGEFAAMMRKRKGNGGIGRRTMRKTLNLR--DALGLVDNGSNQVIEGYFKHHHH 186

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens} Length = 317

 Score =  135 bits (342), Expect = 1e-36
 Identities = 41/196 (20%), Positives = 67/196 (34%), Gaps = 20/196 (10%)

Query: 45  LCEGGELLDRI--LAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
             + G L + I  L  K +  TE     ++  + R     H  G  HRD+KP N L    
Sbjct: 111 FFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGD- 169

Query: 103 KEDSSLKATDFGLSDFIKPGKKFQD----------IVGSAYYVAPEVLKRKS----GPES 148
             +      D G  +      +                +  Y APE+   +S       +
Sbjct: 170 --EGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERT 227

Query: 149 DVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVK 208
           DVWS+G + Y ++ G  P+    + G     L  +        P  S++    +  ++  
Sbjct: 228 DVWSLGCVLYAMMFGEGPYDMVFQKGDSV-ALAVQNQLSIPQSPRHSSALWQLLNSMMTV 286

Query: 209 DPRARLTAAQALSHPW 224
           DP  R      LS   
Sbjct: 287 DPHQRPHIPLLLSQLE 302

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195

 Score =  129 bits (325), Expect = 1e-35
 Identities = 32/174 (18%), Positives = 63/174 (36%), Gaps = 20/174 (11%)

Query: 254 KQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEE---------MRQALAKDLPWK 304
            ++A++      +   +   +  FD +D++ NG I+L+E           +  A     K
Sbjct: 3   SKYAVKLKTDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTK 62

Query: 305 LKESRVLEILQAIDCNTDGLVDFSEFVA-----ATLHVHQLEEHDSEKWHLRSQAAFEKF 359
             +  V    +         + F +F+      AT  + +   ++         A F+ F
Sbjct: 63  RHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIF 122

Query: 360 DIDRDGFITPEELR---MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 407
           D D  G IT +E +     +G+  S    +      D+D  G + + E  R   
Sbjct: 123 DKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHL 176

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A* Length = 195

 Score = 57.1 bits (138), Expect = 9e-10
 Identities = 21/102 (20%), Positives = 35/102 (34%), Gaps = 4/102 (3%)

Query: 246 QFVK-YSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWK 304
           QF+  + +L    L+  A              FD  D D +G+I+L+E +    K     
Sbjct: 87  QFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYG-KISGIS 145

Query: 305 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE 346
             +       +  D +  G +D  E      H+      D E
Sbjct: 146 PSQEDCEATFRHCDLDNAGDLDVDEMTR--QHLGFWYTLDPE 185

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi} Length = 219

 Score =  128 bits (323), Expect = 4e-35
 Identities = 29/187 (15%), Positives = 59/187 (31%), Gaps = 26/187 (13%)

Query: 245 RQFVKYSRLKQFALRALASTLDD----EELADLRDQFDAIDVDKNGSISLEEMRQALAKD 300
            +  K ++ ++ A   +   +      E      + F   D ++ G +  +E+     + 
Sbjct: 18  DKDGKKAKDRKEAWERIRQAIPREKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEV 77

Query: 301 LPWKLKESRVLEILQ---------AIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR 351
           L      SRV +I +                G  DF EF+   L +  + +       L 
Sbjct: 78  LKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFVEFLEFRLMLCYIYDFF----ELT 133

Query: 352 SQAAFEKFDIDRDGFITPEELR-------MHTGLKGSIDPLLEEADIDKDGRISLSEFRR 404
               F++ D   +  +  EE +                  L +E D +  G ++  EF  
Sbjct: 134 --VMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGSVTFDEFAA 191

Query: 405 LLRTASI 411
                 +
Sbjct: 192 WASAVKL 198

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208

 Score =  127 bits (321), Expect = 7e-35
 Identities = 33/176 (18%), Positives = 61/176 (34%), Gaps = 17/176 (9%)

Query: 249 KYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQAL--------AKD 300
           +Y R      +     L  + L+ L  +FD  D+D +G + ++E+            A D
Sbjct: 14  RYLRSVGNQWQFNVEDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATD 73

Query: 301 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR-----SQAA 355
              +     V              +   ++V A     + E     +         S + 
Sbjct: 74  EQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEANRVFAEAERERERRGEPSLIALLSNSY 133

Query: 356 FEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLR 407
           ++  D D DG +  +EL+           +     E+AD DK G++  +E   L R
Sbjct: 134 YDVLDDDGDGTVDVDELKTMMKAFDVPQEAAYTFFEKADTDKSGKLERTELVHLFR 189

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola} Length = 208

 Score = 49.0 bits (117), Expect = 6e-07
 Identities = 10/81 (12%), Positives = 25/81 (30%), Gaps = 15/81 (18%)

Query: 345 SEKWHLRSQAAFEKFDIDRDGFITPEELRM---------------HTGLKGSIDPLLEEA 389
             K   R    F+ FD+D DG +  +E+                    ++ ++       
Sbjct: 31  HPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDRMRQLVNATDEQVEKMRDAVRVFFLHK 90

Query: 390 DIDKDGRISLSEFRRLLRTAS 410
            ++    +   ++    R  +
Sbjct: 91  GVEPVNGLLREDWVEANRVFA 111

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens} Length = 365

 Score =  130 bits (329), Expect = 2e-34
 Identities = 37/197 (18%), Positives = 65/197 (32%), Gaps = 23/197 (11%)

Query: 45  LCEGGELLDRILAKKDS---RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS 101
           L   G LL+ I   K++      +        +ML +  + H   ++H D+KP+NF+  +
Sbjct: 148 LYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGN 207

Query: 102 --------AKEDSSLKATDFGLSDFIK---PGKKFQDIVGSAYYVAPEVLKRKS-GPESD 149
                       + L   D G S  +K    G  F     ++ +   E+L  K    + D
Sbjct: 208 GFLEQDDEDDLSAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQID 267

Query: 150 VWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKD 209
            + +    Y +L G        E G  K     +       W        +F   +L   
Sbjct: 268 YFGVAATVYCMLFGTYMKVKN-EGGECKPEGLFRRLPHLDMW-------NEFFHVMLNIP 319

Query: 210 PRARLTAAQALSHPWVR 226
               L +   L     +
Sbjct: 320 DCHHLPSLDLLRQKLKK 336

>1uu3_A HPDK1, 3-phosphoinositide dependent protein kinase-1; PKB, inhibitor, LY333531, diabetes, cancer, transferase, serine/threonine-protein kinase; HET: SEP LY4; 1.7A {Homo sapiens} SCOP: d.144.1.7 PDB: 1okz_A* 1oky_A* 1uu7_A* 1uu8_A* 2biy_A* 3rwp_A* 2xch_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* ... Length = 310

 Score =  128 bits (325), Expect = 3e-34
 Identities = 62/193 (32%), Positives = 95/193 (49%), Gaps = 27/193 (13%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAK 103
            + GELL  I  +K   + E        ++  V+A  +LH  G++HRD+KPEN L     
Sbjct: 112 AKNGELLKYI--RKIGSFDETCTRFYTAEI--VSALEYLHGKGIIHRDLKPENILL---- 163

Query: 104 EDSS--LKATDFGLS---DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVIT 157
            +    ++ TDFG +          +    VG+A YV+PE+L  KS    SD+W++G I 
Sbjct: 164 -NEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCII 222

Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
           Y L+ G  PF    E  IF+++++ + DF   P       A+D V+KLLV D   RL   
Sbjct: 223 YQLVAGLPPFRAGNEYLIFQKIIKLEYDF---P-EKFFPKARDLVEKLLVLDATKRLGCE 278

Query: 218 QA------LSHPW 224
           +        +HP+
Sbjct: 279 EMEGYGPLKAHPF 291

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A* Length = 310

 Score =  127 bits (321), Expect = 9e-34
 Identities = 43/197 (21%), Positives = 74/197 (37%), Gaps = 13/197 (6%)

Query: 46  CEGGELLDRI--LAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKSA 102
            + G+L   I    K+     E+       Q+       H   ++HRD+KP N F+    
Sbjct: 114 ADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITA-- 171

Query: 103 KEDSSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYIL 160
                +K  D GL  F          +VG+ YY++PE +       +SD+WS+G + Y +
Sbjct: 172 --TGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEM 229

Query: 161 LCGRRPFWDKTED--GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 218
              + PF+    +   + K++ +   D+   P    S   +  V   +  DP  R     
Sbjct: 230 AALQSPFYGDKMNLYSLCKKIEQC--DYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTY 287

Query: 219 ALSHPWVREGGDASEIP 235
                       AS + 
Sbjct: 288 VYDVAKRMHACTASSLE 304

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Length = 220

 Score =  122 bits (308), Expect = 7e-33
 Identities = 30/190 (15%), Positives = 62/190 (32%), Gaps = 18/190 (9%)

Query: 222 HPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAID 281
            P V      +  PI  S +     +     ++      L +T+  ++   +   F  +D
Sbjct: 2   QPPVANFCLWNLQPIQGSWMGAACIYQMPPSVRNTWWFPLLNTIPLDQYTRIYQWFMGVD 61

Query: 282 VDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE 341
            D++G++ + E+          +L     L +++  D + +G + F EF+A    +    
Sbjct: 62  RDRSGTLEINELMMGQFP-GGIRLSPQTALRMMRIFDTDFNGHISFYEFMAMYKFM---- 116

Query: 342 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---HTGLKGS--IDPLLEEADIDKDGR 396
               E         F      R G + P E+       G   +     LL          
Sbjct: 117 ----ELA----YNLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHRLFARGMAF 168

Query: 397 ISLSEFRRLL 406
             L+ +  + 
Sbjct: 169 CDLNCWIAIC 178

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Length = 220

 Score = 58.6 bits (142), Expect = 3e-10
 Identities = 13/106 (12%), Positives = 34/106 (32%), Gaps = 19/106 (17%)

Query: 268 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDF 327
           + +    + F      ++G++   E+  AL + L + + + R   +L  +        D 
Sbjct: 114 KFMELAYNLFVMNARARSGTLEPHEILPAL-QQLGFYINQ-RTSLLLHRLFARGMAFCDL 171

Query: 328 SEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDID-----RDGFIT 368
           + ++A      Q               A++   ++        F  
Sbjct: 172 NCWIAICAFAAQTRS------------AYQMIFMNPYYGPMKPFNP 205

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A Length = 220

 Score = 50.9 bits (122), Expect = 1e-07
 Identities = 15/80 (18%), Positives = 26/80 (32%), Gaps = 14/80 (17%)

Query: 336 HVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK--------GSIDPLLE 387
            ++ +      +        F   D DR G +   EL    G           +   ++ 
Sbjct: 41  LLNTIPLDQYTRI----YQWFMGVDRDRSGTLEINELM--MGQFPGGIRLSPQTALRMMR 94

Query: 388 EADIDKDGRISLSEFRRLLR 407
             D D +G IS  EF  + +
Sbjct: 95  IFDTDFNGHISFYEFMAMYK 114

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A* Length = 299

 Score =  124 bits (314), Expect = 8e-33
 Identities = 44/208 (21%), Positives = 75/208 (36%), Gaps = 25/208 (12%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAV-VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 103
           LC    L D +  +      E+   + +  Q+       H  GL+HRD+KP N  F    
Sbjct: 96  LCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFT--- 152

Query: 104 EDSSLKATDFGLS-------------DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESD 149
            D  +K  DFGL                +    +    VG+  Y++PE +   S   + D
Sbjct: 153 MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVD 212

Query: 150 VWSIGVITYILLCGRRPFWDKTE-DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVK 208
           ++S+G+I + LL    PF  + E      +V   K       +          V+ +L  
Sbjct: 213 IFSLGLILFELLY---PFSTQMERVRTLTDVRNLKFP---PLFTQKYPCEYVMVQDMLSP 266

Query: 209 DPRARLTAAQALSHPWVREGGDASEIPI 236
            P  R  A   + +    +     +  +
Sbjct: 267 SPMERPEAINIIENAVFEDLDFPGKTVL 294

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134

 Score =  118 bits (298), Expect = 2e-32
 Identities = 34/136 (25%), Positives = 63/136 (46%), Gaps = 6/136 (4%)

Query: 273 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 332
               F  IDV+ +G++S EE++  ++K       E  +  I ++ID + +G +D +EF  
Sbjct: 2   AEALFKEIDVNGDGAVSYEEVKAFVSK-KRAIKNEQLLQLIFKSIDADGNGEIDQNEFAK 60

Query: 333 ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR--MHTGLKGSIDPLLEEAD 390
               +   +  D +   L+    ++  D+D DG +T EE+           +   + +AD
Sbjct: 61  FYGSIQGQDLSDDKI-GLK--VLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKAD 117

Query: 391 IDKDGRISLSEFRRLL 406
            + DG I+L EF    
Sbjct: 118 ANGDGYITLEEFLEFS 133

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A Length = 134

 Score = 57.9 bits (141), Expect = 1e-10
 Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 7/70 (10%)

Query: 263 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 322
              DD+    L+  +  +DVD +G ++ EE+          K    +V E +   D N D
Sbjct: 69  DLSDDKI--GLKVLYKLMDVDGDGKLTKEEVTSFFK-----KHGIEKVAEQVMKADANGD 121

Query: 323 GLVDFSEFVA 332
           G +   EF+ 
Sbjct: 122 GYITLEEFLE 131

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens} Length = 337

 Score =  123 bits (310), Expect = 5e-32
 Identities = 41/199 (20%), Positives = 74/199 (37%), Gaps = 28/199 (14%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSA 102
           LC+G  +      +     +      +  Q  R     H     ++HRD+K EN L  + 
Sbjct: 115 LCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSN- 173

Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDI-------------VGSAYYVAPEVLKRKS----G 145
               ++K  DFG +  I     +                  +  Y  PE++   S    G
Sbjct: 174 --QGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIG 231

Query: 146 PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKL 205
            + D+W++G I Y+L   + PF    EDG    ++  K  +   P  +        ++ +
Sbjct: 232 EKQDIWALGCILYLLCFRQHPF----EDGAKLRIVNGK--YSIPPHDTQYTVFHSLIRAM 285

Query: 206 LVKDPRARLTAAQALSHPW 224
           L  +P  RL+ A+ +    
Sbjct: 286 LQVNPEERLSIAEVVHQLQ 304

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} PDB: 2gv5_A 2doq_A 3fwc_A Length = 161

 Score =  118 bits (297), Expect = 6e-32
 Identities = 35/165 (21%), Positives = 75/165 (45%), Gaps = 12/165 (7%)

Query: 251 SRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRV 310
                     L S L +E+  ++ + F   D++ +G +   E++ A+   L ++L +  +
Sbjct: 3   KNRSSLQSGPLNSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKA-LGFELPKREI 61

Query: 311 LEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 370
           L+++   D     L+ + +F    +   ++ + D     ++   AF+ FD D  G I+ +
Sbjct: 62  LDLIDEYDSEGRHLMKYDDFY--IVMGEKILKRDPLD-EIK--RAFQLFDDDHTGKISIK 116

Query: 371 ELR---MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLRTA 409
            LR      G   +   +  ++EE D+D DG I+ +EF  +   +
Sbjct: 117 NLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAICTDS 161

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens} Length = 204

 Score =  119 bits (300), Expect = 7e-32
 Identities = 45/198 (22%), Positives = 77/198 (38%), Gaps = 29/198 (14%)

Query: 229 GDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSI 288
           G     P+  S ++ +   ++        LRA   +     +  L   F  +D D + S+
Sbjct: 3   GLVPRGPLG-SHMDAVDATME-------KLRAQCLSRGASGIQGLARFFRQLDRDGSRSL 54

Query: 289 SLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKW 348
             +E RQ L   L   L ++    + +  D N  G +D  EF+ A               
Sbjct: 55  DADEFRQGL-AKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREA---- 109

Query: 349 HLRSQAAFEKFDIDRDGFITPEELR----------MHTGLKGS---IDPLLEEADI-DKD 394
            +   AAF K D   DG +T ++LR          + +G       +   L+  D  +KD
Sbjct: 110 VIA--AAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKD 167

Query: 395 GRISLSEFRRLLRTASIS 412
           G+++L+EF+      S S
Sbjct: 168 GQVTLAEFQDYYSGVSAS 185

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A Length = 169

 Score =  116 bits (294), Expect = 2e-31
 Identities = 46/174 (26%), Positives = 85/174 (48%), Gaps = 12/174 (6%)

Query: 244 MRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW 303
           M    K     +   +     L +E+  ++R+ FD  D D +G+I  +E++ A+   L +
Sbjct: 1   MSYKAKTVVSARRDQKKGRVGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRA-LGF 59

Query: 304 KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDR 363
           + K+  + +++  ID +  G +DF EF+  T+   ++ E DS +  +    AF  FD D 
Sbjct: 60  EPKKEEIKKMISEIDKDGSGTIDFEEFL--TMMTAKMGERDSRE-EIL--KAFRLFDDDN 114

Query: 364 DGFITPEELR---MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLRTASI 411
            G IT ++LR      G   +   +  ++ EAD + D  I   EF R+++  S+
Sbjct: 115 SGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKTSL 168

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ... Length = 162

 Score =  116 bits (293), Expect = 2e-31
 Identities = 41/149 (27%), Positives = 72/149 (48%), Gaps = 9/149 (6%)

Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           L +E +A+ +  FD  D D  G IS +E+   + + L     +  +  I++ +D +  G 
Sbjct: 14  LSEEMIAEFKAAFDMFDADGGGDISTKELGTVM-RMLGQNPTKEELDAIIEEVDEDGSGT 72

Query: 325 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 381
           +DF EF+   +   + +     +  L     F  FD + DGFI  EEL      TG   +
Sbjct: 73  IDFEEFLVMMVRQMKEDAKGKSEEELA--NCFRIFDKNADGFIDIEELGEILRATGEHVT 130

Query: 382 ---IDPLLEEADIDKDGRISLSEFRRLLR 407
              I+ L++++D + DGRI   EF +++ 
Sbjct: 131 EEDIEDLMKDSDKNNDGRIDFDEFLKMME 159

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Length = 179

 Score =  115 bits (290), Expect = 1e-30
 Identities = 45/152 (29%), Positives = 89/152 (58%), Gaps = 12/152 (7%)

Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 321
           A  L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D + 
Sbjct: 2   ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 60

Query: 322 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 378
           +G +DF EF+  T+   ++++ DSE+  +R   AF  FD D +G+I+  ELR    + G 
Sbjct: 61  NGTIDFPEFL--TMMARKMKDTDSEE-EIR--EAFRVFDKDGNGYISAAELRHVMTNLGE 115

Query: 379 KGS---IDPLLEEADIDKDGRISLSEFRRLLR 407
           K +   +D ++ EADID DG+++  EF +++ 
Sbjct: 116 KLTDEEVDEMIREADIDGDGQVNYEEFVQMMT 147

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A Length = 179

 Score = 71.4 bits (176), Expect = 6e-15
 Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 5/103 (4%)

Query: 266 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 325
           D EE  ++R+ F   D D NG IS  E+R  +  +L  KL +  V E+++  D + DG V
Sbjct: 81  DSEE--EIREAFRVFDKDGNGYISAAELRHVM-TNLGEKLTDEEVDEMIREADIDGDGQV 137

Query: 326 DFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 368
           ++ EFV   +   +     +       +            F  
Sbjct: 138 NYEEFVQ--MMTAKGGGGGAAARKEVIRNKIRAIGKMARVFSV 178

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A Length = 153

 Score =  114 bits (287), Expect = 1e-30
 Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 15/156 (9%)

Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 321
             +L  EE+ +LR+ F   D DK+G I+  ++   + + + +   E  ++E+ Q I+ N 
Sbjct: 2   DRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCM-RTMGYMPTEMELIELSQQINMNL 60

Query: 322 DGLVDFSEFVAATLHVHQLEEHDSEKW---HLRSQAAFEKFDIDRDGFITPEELR--MHT 376
            G VDF +FV       +L    ++      LR   AF +FD + DG I+  ELR  M  
Sbjct: 61  GGHVDFDDFVELM--GPKLLAETADMIGVKELR--DAFREFDTNGDGEISTSELREAMRA 116

Query: 377 GLKGS-----IDPLLEEADIDKDGRISLSEFRRLLR 407
            L        I+ ++ + D++ DGR+   EF R++ 
Sbjct: 117 LLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 152

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens} Length = 384

 Score =  120 bits (302), Expect = 2e-30
 Identities = 48/195 (24%), Positives = 86/195 (44%), Gaps = 25/195 (12%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSA 102
           L  GG+L  R   +++  + E+   + + ++  V A  +L    ++HRDMKP+N L    
Sbjct: 96  LLLGGDL--RYHLQQNVHFKEETVKLFICEL--VMALDYLQNQRIIHRDMKPDNILL--- 148

Query: 103 KEDSS--LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGP----ESDVWSIGVI 156
             D    +  TDF ++  +    +   + G+  Y+APE+   + G       D WS+GV 
Sbjct: 149 --DEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVT 206

Query: 157 TYILLCGRRPFWDKTEDG---IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRAR 213
            Y LL GRRP+  ++      I          +      + S      +KKLL  +P  R
Sbjct: 207 AYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYP----SAWSQEMVSLLKKLLEPNPDQR 262

Query: 214 LTAAQAL-SHPWVRE 227
            +    + + P++ +
Sbjct: 263 FSQLSDVQNFPYMND 277

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174

 Score =  114 bits (287), Expect = 2e-30
 Identities = 32/155 (20%), Positives = 60/155 (38%), Gaps = 15/155 (9%)

Query: 267 DEELADLRDQFDAIDVDKNGSIS---LEEMRQALAKDLPWKLKESRVL-EILQAI----- 317
           D  +  ++  F+ ID DK+G+I+    E M +  AK+   K + ++VL + L  +     
Sbjct: 2   DLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFL 61

Query: 318 -DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHT 376
                   +D + F+ +   + +                F   D + D  I+ +E  +  
Sbjct: 62  TAVAGGKGIDETTFINSMKEMVK-NPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFF 120

Query: 377 GLKGS----IDPLLEEADIDKDGRISLSEFRRLLR 407
           G+ G          +  D + DG +SL EF     
Sbjct: 121 GMLGLDKTMAPASFDAIDTNNDGLLSLEEFVIAGS 155

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174

 Score = 60.5 bits (147), Expect = 4e-11
 Identities = 20/83 (24%), Positives = 31/83 (37%), Gaps = 3/83 (3%)

Query: 266 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 325
                  L   F A+D +++ +IS +E            L ++       AID N DGL+
Sbjct: 89  KSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGM---LGLDKTMAPASFDAIDTNNDGLL 145

Query: 326 DFSEFVAATLHVHQLEEHDSEKW 348
              EFV A       +   + K 
Sbjct: 146 SLEEFVIAGSDFFMNDGDSTNKV 168

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A Length = 174

 Score = 43.9 bits (104), Expect = 2e-05
 Identities = 11/80 (13%), Positives = 22/80 (27%), Gaps = 17/80 (21%)

Query: 345 SEKWHLRSQAAFEKFDIDRDGFITPEEL----RMHTGLKGSIDPLLEE------------ 388
           S+ W  + +  F + D D+DG IT  +                   +             
Sbjct: 1   SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNF 60

Query: 389 -ADIDKDGRISLSEFRRLLR 407
              +     I  + F   ++
Sbjct: 61  LTAVAGGKGIDETTFINSMK 80

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A Length = 143

 Score =  113 bits (285), Expect = 2e-30
 Identities = 39/147 (26%), Positives = 81/147 (55%), Gaps = 12/147 (8%)

Query: 267 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD 326
           +E+  ++R+ FD  D D  G+I ++E++ A+   L ++ K+  + +++  ID    G ++
Sbjct: 2   EEQKQEIREAFDLFDADGTGTIDVKELKVAMRA-LGFEPKKEEIKKMISEIDKEGTGKMN 60

Query: 327 FSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS-- 381
           F +F+  T+   ++ E D+++  +    AF+ FD D  G I+ + L+      G   +  
Sbjct: 61  FGDFL--TVMTQKMSEKDTKE-EIL--KAFKLFDDDETGKISFKNLKRVAKELGENLTDE 115

Query: 382 -IDPLLEEADIDKDGRISLSEFRRLLR 407
            +  +++EAD D DG +S  EF R+++
Sbjct: 116 ELQEMIDEADRDGDGEVSEQEFLRIMK 142

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A Length = 143

 Score = 55.2 bits (134), Expect = 2e-09
 Identities = 18/67 (26%), Positives = 33/67 (49%), Gaps = 3/67 (4%)

Query: 266 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 325
           D +E  ++   F   D D+ G IS + +++   K+L   L +  + E++   D + DG V
Sbjct: 76  DTKE--EILKAFKLFDDDETGKISFKNLKRVA-KELGENLTDEELQEMIDEADRDGDGEV 132

Query: 326 DFSEFVA 332
              EF+ 
Sbjct: 133 SEQEFLR 139

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A* Length = 289

 Score =  117 bits (295), Expect = 3e-30
 Identities = 43/203 (21%), Positives = 79/203 (38%), Gaps = 31/203 (15%)

Query: 45  LCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN-FLFKS 101
            C GG L D I    +  S + E +   ++ Q+ R     H   LVH D+KP N F+ ++
Sbjct: 92  YCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRT 151

Query: 102 ---------------AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSG- 145
                          A      K  D G    I   +      G + ++A EVL+     
Sbjct: 152 SIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISSPQVE---EGDSRFLANEVLQENYTH 208

Query: 146 -PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVK 203
            P++D++++  +T +   G  P     +   + E+ + +        P  +S    + +K
Sbjct: 209 LPKADIFALA-LTVVCAAGAEPLPRNGDQ--WHEIRQGRLP----RIPQVLSQEFTELLK 261

Query: 204 KLLVKDPRARLTAAQALSHPWVR 226
            ++  DP  R +A   + H  + 
Sbjct: 262 VMIHPDPERRPSAMALVKHSVLL 284

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A* Length = 336

 Score =  118 bits (297), Expect = 4e-30
 Identities = 45/190 (23%), Positives = 73/190 (38%), Gaps = 16/190 (8%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
            EGG L    L K+     E  A   + Q L      H   ++H D+K +N L   + + 
Sbjct: 132 LEGGSLGQ--LIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLL--SSDG 187

Query: 106 SSLKATDFGLSDFIKPGK------KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITY 158
           S     DFG +  ++P            I G+  ++APEV+  K    + D+WS      
Sbjct: 188 SRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSC-CMM 246

Query: 159 I-LLCGRRPFWDKTE-DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA 216
           + +L G  P+          K +    P  R  P PS +      +++ L K+P  R +A
Sbjct: 247 LHMLNGCHPWTQYFRGPLCLK-IASEPPPIREIP-PSCAPLTAQAIQEGLRKEPVHRASA 304

Query: 217 AQALSHPWVR 226
            +        
Sbjct: 305 MELRRKVGKA 314

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B* Length = 155

 Score =  113 bits (284), Expect = 4e-30
 Identities = 49/157 (31%), Positives = 75/157 (47%), Gaps = 21/157 (13%)

Query: 266 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 325
           D +E+  L  +F  +D+D +GS+S+EE        LP   +   V  ++   D + +G V
Sbjct: 1   DADEIKRLGKRFKKLDLDNSGSLSVEEF-----MSLPELQQNPLVQRVIDIFDTDGNGEV 55

Query: 326 DFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR----MHTG---- 377
           DF EF+          + D E+  LR   AF  +D+D+DG+I+  EL     M  G    
Sbjct: 56  DFKEFIEGVSQFSV--KGDKEQ-KLR--FAFRIYDMDKDGYISNGELFQVLKMMVGNNLK 110

Query: 378 ---LKGSIDPLLEEADIDKDGRISLSEFRRLLRTASI 411
              L+  +D  +  AD D DGRIS  EF  ++    I
Sbjct: 111 DTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDI 147

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ... Length = 161

 Score =  111 bits (281), Expect = 1e-29
 Identities = 40/156 (25%), Positives = 73/156 (46%), Gaps = 10/156 (6%)

Query: 259 RALASTLDDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAI 317
           +A    L +E+  + +  FD   +  ++GSIS +E+ + +   L        + E++  +
Sbjct: 6   KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRM-LGQNPTPEELQEMIDEV 64

Query: 318 DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---M 374
           D +  G VDF EF+   +   + +     +  L     F  FD + DG+I  EEL+    
Sbjct: 65  DEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELS--DLFRMFDKNADGYIDLEELKIMLQ 122

Query: 375 HTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 407
            TG   +   I+ L+++ D + DGRI   EF   ++
Sbjct: 123 ATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 158

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A Length = 158

 Score =  111 bits (281), Expect = 1e-29
 Identities = 30/157 (19%), Positives = 66/157 (42%), Gaps = 13/157 (8%)

Query: 260 ALASTLDDEELADLRDQFDAID-VDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID 318
              S L   ++  L   F   +  + +G +S +++   L + L  +  +S + +++   D
Sbjct: 2   GDVSKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIIL-EVLGIQQTKSTIRQLIDEFD 60

Query: 319 CNTDGLVDFSEFVAATLH--VHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR--- 373
              +G +DF  F          ++     ++  LR   AF  +D + +G+I+ + +R   
Sbjct: 61  PFGNGDIDFDSFKIIGARFLGEEVNPEQMQQ-ELR--EAFRLYDKEGNGYISTDVMREIL 117

Query: 374 MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 407
                  S   +D +++E D D  G +   EF  ++ 
Sbjct: 118 AELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMT 154

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ... Length = 148

 Score =  111 bits (279), Expect = 2e-29
 Identities = 48/151 (31%), Positives = 87/151 (57%), Gaps = 12/151 (7%)

Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 321
           A  L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D + 
Sbjct: 1   AEQLTEEQIAEFKEAFALFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADG 59

Query: 322 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 378
           +G +DF EF+  +L   +++E DSE+  L    AF+ FD D +G I+  ELR    + G 
Sbjct: 60  NGTIDFPEFL--SLMARKMKEQDSEE-ELI--EAFKVFDRDGNGLISAAELRHVMTNLGE 114

Query: 379 KGS---IDPLLEEADIDKDGRISLSEFRRLL 406
           K +   +D ++ EADID DG I+  EF R++
Sbjct: 115 KLTDDEVDEMIREADIDGDGHINYEEFVRMM 145

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus} Length = 332

 Score =  116 bits (291), Expect = 2e-29
 Identities = 41/197 (20%), Positives = 69/197 (35%), Gaps = 23/197 (11%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAV-VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 103
           LC    L D +  +      E    + +  Q+       H  GL+HRD+KP N  F    
Sbjct: 142 LCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTM-- 199

Query: 104 EDSSLKATDFGLS-------------DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESD 149
            D  +K  DFGL                +         VG+  Y++PE +   +   + D
Sbjct: 200 -DDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVD 258

Query: 150 VWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKD 209
           ++S+G+I + LL       ++    I  +V   K       +          V+ +L   
Sbjct: 259 IFSLGLILFELLYSFSTQMERVR--IITDVRNLKFP---LLFTQKYPQEHMMVQDMLSPS 313

Query: 210 PRARLTAAQALSHPWVR 226
           P  R  A   + +    
Sbjct: 314 PTERPEATDIIENAIFE 330

>3g51_A Ribosomal protein S6 kinase alpha-3; N-terminal kinase domain of P90 ribosomal S6 kinase 2, ATP- binding, nucleotide-binding, phosphoprotein; HET: ANP; 1.80A {Mus musculus} PDB: 2z7q_A* 2z7r_A* 2z7s_A* Length = 325

 Score =  115 bits (290), Expect = 3e-29
 Identities = 57/190 (30%), Positives = 89/190 (46%), Gaps = 24/190 (12%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAK 103
             GG+L  R+   K+  +TE+D    + ++    A  HLH  G+++RD+KPEN L     
Sbjct: 108 LRGGDLFTRL--SKEVMFTEEDVKFYLAEL--ALALDHLHSLGIIYRDLKPENILL---- 159

Query: 104 EDSS--LKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYI 159
            D    +K TDFGLS + I   KK     G+  Y+APEV+ R+     +D WS GV+ + 
Sbjct: 160 -DEEGHIKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFE 218

Query: 160 LLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL----- 214
           +L G  PF  K        +L+ K          +S  A+  ++ L  ++P  RL     
Sbjct: 219 MLTGTLPFQGKDRKETMTMILKAKLGMP----QFLSPEAQSLLRMLFKRNPANRLGAGPD 274

Query: 215 TAAQALSHPW 224
              +   H +
Sbjct: 275 GVEEIKRHSF 284

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A* Length = 410

 Score =  116 bits (292), Expect = 5e-29
 Identities = 55/193 (28%), Positives = 84/193 (43%), Gaps = 25/193 (12%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAK 103
             GG+L+  +++       EK A     ++  V A   +H  G +HRD+KP+N L     
Sbjct: 151 MPGGDLV-NLMSNY--DVPEKWARFYTAEV--VLALDAIHSMGFIHRDVKPDNMLL---- 201

Query: 104 EDSS--LKATDFGLSDFIKPGKKFQD--IVGSAYYVAPEVLKRKS-----GPESDVWSIG 154
            D S  LK  DFG    +      +    VG+  Y++PEVLK +      G E D WS+G
Sbjct: 202 -DKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVG 260

Query: 155 VITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 214
           V  Y +L G  PF+  +  G + +++ +K          IS  AK+ +   L  D   RL
Sbjct: 261 VFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFL-TDREVRL 319

Query: 215 TAAQAL---SHPW 224
                     H +
Sbjct: 320 GRNGVEEIKRHLF 332

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A* Length = 327

 Score =  114 bits (288), Expect = 6e-29
 Identities = 57/193 (29%), Positives = 94/193 (48%), Gaps = 24/193 (12%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAK 103
             GGEL  ++  +++  + E  A   + ++    A  HLH  G+++RD+KPEN +     
Sbjct: 103 LSGGELFMQL--EREGIFMEDTACFYLAEI--SMALGHLHQKGIIYRDLKPENIML---- 154

Query: 104 EDSS--LKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYI 159
            +    +K TDFGL  + I  G       G+  Y+APE+L R       D WS+G + Y 
Sbjct: 155 -NHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYD 213

Query: 160 LLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA 219
           +L G  PF  +       ++L+ K +    P P ++  A+D +KKLL ++  +RL A   
Sbjct: 214 MLTGAPPFTGENRKKTIDKILKCKLNL---P-PYLTQEARDLLKKLLKRNAASRLGAGPG 269

Query: 220 -----LSHPWVRE 227
                 +HP+ R 
Sbjct: 270 DAGEVQAHPFFRH 282

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A Length = 208

 Score =  111 bits (279), Expect = 7e-29
 Identities = 40/187 (21%), Positives = 78/187 (41%), Gaps = 28/187 (14%)

Query: 251 SRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 308
           + L+   L  +         ++  L  +F ++D  +NG++S E+ ++     +   L + 
Sbjct: 7   TLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIPELAIN-PLGD- 64

Query: 309 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEK----------WHLRSQAAFEK 358
               I+ A     +  V+F  F+    H   +E+++  K             +   AF  
Sbjct: 65  ---RIINAFFSEGEDQVNFRGFMRTLAHFRPIEDNEKSKDVNGPEPLNSRSNKLHFAFRL 121

Query: 359 FDIDRDGFITPEELR----MHTGLKGS-------IDPLLEEADIDKDGRISLSEFRRLLR 407
           +D+D+D  I+ +EL     M  G+  S        D  ++EAD D D  IS +EF ++L 
Sbjct: 122 YDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVKVLE 181

Query: 408 TASISSR 414
              +  +
Sbjct: 182 KVDVEQK 188

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens} Length = 295

 Score =  113 bits (286), Expect = 7e-29
 Identities = 53/199 (26%), Positives = 87/199 (43%), Gaps = 18/199 (9%)

Query: 45  LCEGGELLDRILAKKDSR--YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
              GG L   +L  K       E+      +Q+L      H + +VHRD+K +N L  + 
Sbjct: 100 QVPGGSLSA-LLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINT- 157

Query: 103 KEDSSLKATDFGLSDFI-KPGKKFQDIVGSAYYVAPEVLKRKS---GPESDVWSIGVITY 158
                LK +DFG S  +       +   G+  Y+APE++ +     G  +D+WS+G  T 
Sbjct: 158 -YSGVLKISDFGTSKRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLG-CTI 215

Query: 159 I-LLCGRRPFWDKTEDG--IFK-EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 214
           I +  G+ PF++  E    +FK  + +  P+    P  S+S  AK F+ K    DP  R 
Sbjct: 216 IEMATGKPPFYELGEPQAAMFKVGMFKVHPEI---P-ESMSAEAKAFILKCFEPDPDKRA 271

Query: 215 TAAQALSHPWVREGGDASE 233
            A   L   +++      +
Sbjct: 272 CANDLLVDEFLKVSSKKKK 290

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191

 Score =  110 bits (277), Expect = 8e-29
 Identities = 29/163 (17%), Positives = 64/163 (39%), Gaps = 20/163 (12%)

Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKL----KESRVLEILQAIDCN 320
            +   +   +  F+ +DV+ NG ISL+EM    +  +   L    ++++  +        
Sbjct: 10  DNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFG 69

Query: 321 TDGL-----VDFSEFVAATLHV-----HQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 370
             G+      D+  ++     +      +  +++     +   A F+  D D++G IT +
Sbjct: 70  GAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLD 129

Query: 371 ELRM---HTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 407
           E +      G+  S    +      DID+ G++ + E  R   
Sbjct: 130 EWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHL 172

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191

 Score = 62.1 bits (151), Expect = 2e-11
 Identities = 21/105 (20%), Positives = 37/105 (35%), Gaps = 2/105 (1%)

Query: 246 QFVK-YSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWK 304
            +++ + +L    L   A              FD +D D+NG+I+L+E +    K     
Sbjct: 83  AYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYT-KAAGII 141

Query: 305 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWH 349
                  E  +  D +  G +D  E     L      +   EK +
Sbjct: 142 QSSEDCEETFRVCDIDESGQLDVDEMTRQHLGFWYTMDPACEKLY 186

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A Length = 191

 Score = 40.6 bits (95), Expect = 4e-04
 Identities = 12/78 (15%), Positives = 24/78 (30%), Gaps = 16/78 (20%)

Query: 341 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM-----------HTGLKGSIDPLLEEA 389
            + D+ +W  R +  F   D++ +G I+ +E+              T  +        EA
Sbjct: 7   SDFDNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEA 66

Query: 390 DIDKDG-----RISLSEF 402
                G           +
Sbjct: 67  FFGGAGMKYGVETDWPAY 84

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A* Length = 345

 Score =  114 bits (288), Expect = 8e-29
 Identities = 52/186 (27%), Positives = 88/186 (47%), Gaps = 14/186 (7%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC-HLHGLVHRDMKPENFLFKSAKE 104
             GG+L+  I  +   ++    A     +++ +  +  H  G+V+RD+K +N L      
Sbjct: 100 LNGGDLMYHI--QSCHKFDLSRATFYAAEII-LGLQFLHSKGIVYRDLKLDNILLDK--- 153

Query: 105 DSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC 162
           D  +K  DFG+  + +    K     G+  Y+APE+L  +      D WS GV+ Y +L 
Sbjct: 154 DGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLI 213

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL-S 221
           G+ PF  + E+ +F  +  + P + R     +   AKD + KL V++P  RL     +  
Sbjct: 214 GQSPFHGQDEEELFHSIRMDNPFYPR----WLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 269

Query: 222 HPWVRE 227
           HP  RE
Sbjct: 270 HPLFRE 275

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A Length = 186

 Score =  109 bits (275), Expect = 1e-28
 Identities = 23/165 (13%), Positives = 53/165 (32%), Gaps = 15/165 (9%)

Query: 258 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK--------DLPWKLKESR 309
           +  +  +     L  ++ +   +DV  +G IS E+      +            +     
Sbjct: 1   MPEITESERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQE 60

Query: 310 VLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWH-LRSQAAFEKFDIDRDGFIT 368
            L +   +       +   E            + + +    ++S   ++  D D+DG+++
Sbjct: 61  FLRVADQLGLAPGVRISVEEAAVNATDSLLKMKGEEKAMAVIQSLIMYDCIDTDKDGYVS 120

Query: 369 PEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLR 407
             E +      G               D +K+G+IS  EF   + 
Sbjct: 121 LPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFLVTVN 165

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A* Length = 437

 Score =  115 bits (289), Expect = 2e-28
 Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 31/198 (15%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAK 103
             GG+LL   L+K + R  E+ A   + +M  V A   +H    VHRD+KP+N L     
Sbjct: 156 YVGGDLLTL-LSKFEDRLPEEMARFYLAEM--VIAIDSVHQLHYVHRDIKPDNILM---- 208

Query: 104 EDSS--LKATDFGLSDFIKPGKKFQDI-----VGSAYYVAPEVLKRKS------GPESDV 150
            D +  ++  DFG         +   +     VG+  Y++PE+L+         GPE D 
Sbjct: 209 -DMNGHIRLADFGSC---LKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDW 264

Query: 151 WSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKD 209
           WS+GV  Y +L G  PF+ ++    + +++ +K  F+     + +S +AKD +++L+   
Sbjct: 265 WSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSR 324

Query: 210 PRARLTAAQAL---SHPW 224
              RL          HP+
Sbjct: 325 EH-RLGQNGIEDFKKHPF 341

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 1f54_A 1f55_A Length = 147

 Score =  107 bits (269), Expect = 4e-28
 Identities = 47/152 (30%), Positives = 80/152 (52%), Gaps = 13/152 (8%)

Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 321
           +  L +E++A+ ++ F   D D +GSIS  E+   + + L     E+ V +++  ID + 
Sbjct: 2   SQNLTEEQIAEFKEAFALFDKDNSGSISASELATVM-RSLGLSPSEAEVADLMNEIDVDG 60

Query: 322 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 378
           +  ++FSEF+   L   QL+ +DSE+  L    AF+ FD + DG I+  EL+      G 
Sbjct: 61  NHAIEFSEFL--ALMSRQLKCNDSEQ-ELL--EAFKVFDKNGDGLISAAELKHVLTSIGE 115

Query: 379 KGS---IDPLLEEADIDKDGRISLSEFRRLLR 407
           K +   +D +L E   D  G I++ +F  LL 
Sbjct: 116 KLTDAEVDEMLREVS-DGSGEINIKQFAALLS 146

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ... Length = 337

 Score =  112 bits (282), Expect = 5e-28
 Identities = 59/188 (31%), Positives = 97/188 (51%), Gaps = 20/188 (10%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAK 103
             GGEL   +   ++  +TE+ A     ++  V+A  +LH   +V+RD+K EN +     
Sbjct: 87  ANGGELFFHL--SRERVFTEERARFYGAEI--VSALEYLHSRDVVYRDIKLENLMLDK-- 140

Query: 104 EDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILL 161
            D  +K TDFGL  + I  G   +   G+  Y+APEVL+    G   D W +GV+ Y ++
Sbjct: 141 -DGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMM 199

Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA-- 219
           CGR PF+++  + +F+ +L  +  F R    ++S  AK  +  LL KDP+ RL    +  
Sbjct: 200 CGRLPFYNQDHERLFELILMEEIRFPR----TLSPEAKSLLAGLLKKDPKQRLGGGPSDA 255

Query: 220 ---LSHPW 224
              + H +
Sbjct: 256 KEVMEHRF 263

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176

 Score =  107 bits (270), Expect = 5e-28
 Identities = 28/161 (17%), Positives = 53/161 (32%), Gaps = 20/161 (12%)

Query: 267 DEELADLRDQFDAIDVDKNGSIS---LEEMRQALAKDLPWKLKESRVLEI---------- 313
                 L+ +FD  D D NG++     E+  Q +A+        + V  +          
Sbjct: 3   AIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDY 62

Query: 314 -LQAIDCNTDGLVDFSEFVAATLHVHQL--EEHDSEKWHLRSQAAFEKFDIDRDGFITPE 370
             +     +DG +   +F+  T ++     E   +       +      D + DG I  +
Sbjct: 63  LAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINAD 122

Query: 371 ELRMHTGLKGS----IDPLLEEADIDKDGRISLSEFRRLLR 407
           E        G           + D + +G +SL E    +R
Sbjct: 123 EFAAWLTALGMSKAEAAEAFNQVDTNGNGELSLDELLTAVR 163

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176

 Score = 55.9 bits (135), Expect = 1e-09
 Identities = 11/69 (15%), Positives = 25/69 (36%), Gaps = 3/69 (4%)

Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
            +      ++      D + +G I+ +E    L       + ++   E    +D N +G 
Sbjct: 96  FNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTA---LGMSKAEAAEAFNQVDTNGNGE 152

Query: 325 VDFSEFVAA 333
           +   E + A
Sbjct: 153 LSLDELLTA 161

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5 Length = 176

 Score = 51.7 bits (124), Expect = 4e-08
 Identities = 14/82 (17%), Positives = 29/82 (35%), Gaps = 21/82 (25%)

Query: 345 SEKWHLRSQAAFEKFDIDRDGFITPEEL---------------------RMHTGLKGSID 383
           +     R +  F+++D D +G +   +                       +     G  D
Sbjct: 2   TAIASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFD 61

Query: 384 PLLEEADIDKDGRISLSEFRRL 405
            L +EA +  DG ++  +F R+
Sbjct: 62  YLAKEAGVGSDGSLTEEQFIRV 83

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens} Length = 353

 Score =  112 bits (282), Expect = 7e-28
 Identities = 54/191 (28%), Positives = 91/191 (47%), Gaps = 19/191 (9%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC-HLHGLVHRDMKPENFLFKSAKE 104
             GG+L+  I  +K  R+ E  A     +++  A    H  G+++RD+K +N L      
Sbjct: 106 VNGGDLMFHI--QKSRRFDEARARFYAAEII-SALMFLHDKGIIYRDLKLDNVLLDH--- 159

Query: 105 DSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC 162
           +   K  DFG+  + I  G       G+  Y+APE+L+    GP  D W++GV+ Y +LC
Sbjct: 160 EGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLC 219

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAA 217
           G  PF  + ED +F+ +L ++  +       +   A   +K  + K+P  RL        
Sbjct: 220 GHAPFEAENEDDLFEAILNDEVVYPT----WLHEDATGILKSFMTKNPTMRLGSLTQGGE 275

Query: 218 QAL-SHPWVRE 227
            A+  HP+ +E
Sbjct: 276 HAILRHPFFKE 286

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 142

 Score =  106 bits (267), Expect = 8e-28
 Identities = 30/148 (20%), Positives = 68/148 (45%), Gaps = 13/148 (8%)

Query: 267 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD 326
           D+++++ ++ F+  D ++ G I+ E ++  L +    +++ +   E+    D   +G + 
Sbjct: 2   DDQVSEFKEAFELFDSERTGFITKEGLQTVLKQ-FGVRVEPAAFNEMFNEADATGNGKIQ 60

Query: 327 FSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS-- 381
           F EF+  ++   ++++  SE   LR   AF  FD +  G+I    L+   ++ G +    
Sbjct: 61  FPEFL--SMMGRRMKQTTSED-ILR--QAFRTFDPEGTGYIPKAALQDALLNLGDRLKPH 115

Query: 382 -IDPLLEEADIDKDGRISLSEFRRLLRT 408
                L   + +  G+I    F   + T
Sbjct: 116 EFAEFLGITETE-KGQIRYDNFINTMFT 142

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 142

 Score = 50.9 bits (123), Expect = 4e-08
 Identities = 16/67 (23%), Positives = 26/67 (38%), Gaps = 4/67 (5%)

Query: 266 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 325
             E+   LR  F   D +  G I    ++ AL  +L  +LK     E L   +    G +
Sbjct: 76  TSED--ILRQAFRTFDPEGTGYIPKAALQDAL-LNLGDRLKPHEFAEFLGITETE-KGQI 131

Query: 326 DFSEFVA 332
            +  F+ 
Sbjct: 132 RYDNFIN 138

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7 Length = 318

 Score =  111 bits (279), Expect = 9e-28
 Identities = 57/196 (29%), Positives = 90/196 (45%), Gaps = 33/196 (16%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAK 103
            EGGEL   +  +K  R+    A     ++    A  +LH   +++RD+KPEN L     
Sbjct: 88  IEGGELFSLL--RKSQRFPNPVAKFYAAEV--CLALEYLHSKDIIYRDLKPENILL---- 139

Query: 104 EDSS--LKATDFGLSDFIKPGKKFQDIV----GSAYYVAPEVLKRKS-GPESDVWSIGVI 156
            D +  +K TDFG +      K   D+     G+  Y+APEV+  K      D WS G++
Sbjct: 140 -DKNGHIKITDFGFA------KYVPDVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGIL 192

Query: 157 TYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-- 214
            Y +L G  PF+D      ++++L  +  F   P P  +   KD + +L+ +D   RL  
Sbjct: 193 IYEMLAGYTPFYDSNTMKTYEKILNAELRF---P-PFFNEDVKDLLSRLITRDLSQRLGN 248

Query: 215 ---TAAQALSHPWVRE 227
                    +HPW +E
Sbjct: 249 LQNGTEDVKNHPWFKE 264

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens} Length = 412

 Score =  112 bits (283), Expect = 1e-27
 Identities = 53/197 (26%), Positives = 90/197 (45%), Gaps = 27/197 (13%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAK 103
             GG+LL  +L+K   R   + A   + ++  V A   +H  G VHRD+KP+N L     
Sbjct: 143 YVGGDLL-TLLSKFGERIPAEMARFYLAEI--VMAIDSVHRLGYVHRDIKPDNILL---- 195

Query: 104 EDSS--LKATDFGLSDFIKPGKKFQD--IVGSAYYVAPEVLKRKS--------GPESDVW 151
            D    ++  DFG    ++     +    VG+  Y++PE+L+           GPE D W
Sbjct: 196 -DRCGHIRLADFGSCLKLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWW 254

Query: 152 SIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-ISNSAKDFVKKLLVKDP 210
           ++GV  Y +  G+ PF+  +    + +++  K           +   A+DF+++LL   P
Sbjct: 255 ALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLL-CPP 313

Query: 211 RARLTAAQAL---SHPW 224
             RL    A    +HP+
Sbjct: 314 ETRLGRGGAGDFRTHPF 330

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A* Length = 353

 Score =  111 bits (280), Expect = 1e-27
 Identities = 49/191 (25%), Positives = 87/191 (45%), Gaps = 20/191 (10%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAK 103
             GG+L+  I  ++  R+ E  A     ++        L   G+++RD+K +N +  S  
Sbjct: 103 VNGGDLMYHI--QQVGRFKEPHAVFYAAEI--AIGLFFLQSKGIIYRDLKLDNVMLDS-- 156

Query: 104 EDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILL 161
            +  +K  DFG+  + I  G   +   G+  Y+APE++  +  G   D W+ GV+ Y +L
Sbjct: 157 -EGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML 215

Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA-- 219
            G+ PF  + ED +F+ ++ +   + +    S+S  A    K L+ K P  RL       
Sbjct: 216 AGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICKGLMTKHPGKRLGCGPEGE 271

Query: 220 ---LSHPWVRE 227
                H + R 
Sbjct: 272 RDIKEHAFFRY 282

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ... Length = 350

 Score =  111 bits (279), Expect = 1e-27
 Identities = 49/191 (25%), Positives = 84/191 (43%), Gaps = 29/191 (15%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAK 103
             GGE+   +  ++  R++E  A     Q+  V    +LH   L++RD+KPEN L     
Sbjct: 123 VAGGEMFSHL--RRIGRFSEPHARFYAAQI--VLTFEYLHSLDLIYRDLKPENLLIDQ-- 176

Query: 104 EDSSLKATDFGLSDFIKPGKKFQDIV----GSAYYVAPEVLKRKS-GPESDVWSIGVITY 158
               ++ TDFG +      K+ +       G+   +APE++  K      D W++GV+ Y
Sbjct: 177 -QGYIQVTDFGFA------KRVKGRTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIY 229

Query: 159 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 218
            +  G  PF+      I+++++  K  F   P    S+  KD ++ LL  D   R    +
Sbjct: 230 EMAAGYPPFFADQPIQIYEKIVSGKVRF---P-SHFSSDLKDLLRNLLQVDLTKRFGNLK 285

Query: 219 A-----LSHPW 224
                  +H W
Sbjct: 286 NGVNDIKNHKW 296

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens} Length = 211

 Score =  107 bits (269), Expect = 2e-27
 Identities = 35/163 (21%), Positives = 61/163 (37%), Gaps = 20/163 (12%)

Query: 257 ALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQA 316
           ++      +  +E       F  +    +G  +L E +  L      +     + ++   
Sbjct: 8   SIAGDQKAVPTQETHVWYRTF--MMEYPSGLQTLHEFKTLLGLQGLNQKANKHIDQVYNT 65

Query: 317 IDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR--- 373
            D N DG VDF EF+AA   + Q +     KW       F+ +D D +G I   EL    
Sbjct: 66  FDTNKDGFVDFLEFIAAVNLIMQEKMEQKLKW------YFKLYDADGNGSIDKNELLDMF 119

Query: 374 ---------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 407
                         +  I+ +  + DI+ DG ++L EF   + 
Sbjct: 120 MAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMA 162

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A* Length = 446

 Score =  112 bits (282), Expect = 2e-27
 Identities = 58/189 (30%), Positives = 95/189 (50%), Gaps = 21/189 (11%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH---GLVHRDMKPENFLFKSA 102
             GGEL   +   ++  ++E  A     ++  V+A  +LH    +V+RD+K EN +    
Sbjct: 230 ANGGELFFHL--SRERVFSEDRARFYGAEI--VSALDYLHSEKNVVYRDLKLENLMLDK- 284

Query: 103 KEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYIL 160
             D  +K TDFGL  + IK G   +   G+  Y+APEVL+    G   D W +GV+ Y +
Sbjct: 285 --DGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEM 342

Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA- 219
           +CGR PF+++  + +F+ +L  +  F R    ++   AK  +  LL KDP+ RL      
Sbjct: 343 MCGRLPFYNQDHEKLFELILMEEIRFPR----TLGPEAKSLLSGLLKKDPKQRLGGGSED 398

Query: 220 ----LSHPW 224
               + H +
Sbjct: 399 AKEIMQHRF 407

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A Length = 674

 Score =  113 bits (284), Expect = 3e-27
 Identities = 49/191 (25%), Positives = 87/191 (45%), Gaps = 20/191 (10%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAK 103
             GG+L+  I  ++  R+ E  A     ++        L   G+++RD+K +N +  S  
Sbjct: 424 VNGGDLMYHI--QQVGRFKEPHAVFYAAEI--AIGLFFLQSKGIIYRDLKLDNVMLDS-- 477

Query: 104 EDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILL 161
            +  +K  DFG+  + I  G   +   G+  Y+APE++  +  G   D W+ GV+ Y +L
Sbjct: 478 -EGHIKIADFGMCKENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEML 536

Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA-- 219
            G+ PF  + ED +F+ ++ +   + +    S+S  A    K L+ K P  RL       
Sbjct: 537 AGQAPFEGEDEDELFQSIMEHNVAYPK----SMSKEAVAICKGLMTKHPGKRLGCGPEGE 592

Query: 220 ---LSHPWVRE 227
                H + R 
Sbjct: 593 RDIKEHAFFRY 603

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A* Length = 373

 Score =  110 bits (277), Expect = 4e-27
 Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 23/189 (12%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAK 103
             GGEL   +  +++  + E  A     ++   +A  +LH   +V+RD+KPEN L     
Sbjct: 121 INGGELFYHL--QRERCFLEPRARFYAAEI--ASALGYLHSLNIVYRDLKPENILL---- 172

Query: 104 EDSS--LKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYI 159
            DS   +  TDFGL  + I+         G+  Y+APEVL ++      D W +G + Y 
Sbjct: 173 -DSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYE 231

Query: 160 LLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL----T 215
           +L G  PF+ +    ++  +L      +    P+I+NSA+  ++ LL KD   RL     
Sbjct: 232 MLYGLPPFYSRNTAEMYDNILNKPLQLK----PNITNSARHLLEGLLQKDRTKRLGAKDD 287

Query: 216 AAQALSHPW 224
             +  SH +
Sbjct: 288 FMEIKSHVF 296

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 3fpq_A Length = 290

 Score =  108 bits (272), Expect = 5e-27
 Identities = 37/188 (19%), Positives = 73/188 (38%), Gaps = 14/188 (7%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG----LVHRDMKPENFLFK 100
           L   G L      K+      K      RQ+L+      LH     ++HRD+K +N    
Sbjct: 110 LMTSGTLKT--YLKRFKVMKIKVLRSWCRQILK--GLQFLHTRTPPIIHRDLKCDNIFIT 165

Query: 101 SAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYIL 160
                 S+K  D GL+  +K     + ++G+  ++APE+ + K     DV++ G+    +
Sbjct: 166 G--PTGSVKIGDLGLAT-LKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEM 222

Query: 161 LCGRRPFWDKTEDG-IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA 219
                P+ +      I++ V                   K+ ++  + ++   R +    
Sbjct: 223 ATSEYPYSECQNAAQIYRRVTSGVK--PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDL 280

Query: 220 LSHPWVRE 227
           L+H + +E
Sbjct: 281 LNHAFFQE 288

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens} Length = 326

 Score =  109 bits (273), Expect = 7e-27
 Identities = 56/206 (27%), Positives = 98/206 (47%), Gaps = 22/206 (10%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
            C  G + D I   K +   E+  A + R++LR  +  H H ++HRD+K +N L     E
Sbjct: 108 FCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLT---E 164

Query: 105 DSSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRKSGPES------DVWSIGVIT 157
           ++ +K  DFG+S  +     +    +G+ Y++APEV+     P++      D+WS+G IT
Sbjct: 165 NAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLG-IT 223

Query: 158 YI-LLCGRRPFWD----KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRA 212
            I +  G  P  D    +    +F       P  + K W   S   + F++  LVK+   
Sbjct: 224 AIEMAEGAPPLCDMHPMRA---LFLIPRNPAPRLKSKKW---SKKFQSFIESCLVKNHSQ 277

Query: 213 RLTAAQALSHPWVREGGDASEIPIDI 238
           R    Q + HP++R+  +  ++ I +
Sbjct: 278 RPATEQLMKHPFIRDQPNERQVRIQL 303

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} Length = 202

 Score =  105 bits (264), Expect = 8e-27
 Identities = 42/188 (22%), Positives = 77/188 (40%), Gaps = 27/188 (14%)

Query: 249 KYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 308
             + +         +      L  L  +F A+D +K G +S  +++Q  A  +   L + 
Sbjct: 7   HAAVIPDGDSIRRETGFSQASLLRLHHRFRALDRNKKGYLSRMDLQQIGALAVN-PLGD- 64

Query: 309 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQA-----------AFE 357
               I+++   +    VDF  FV    H   +E+ D+E    +              AF+
Sbjct: 65  ---RIIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQ 121

Query: 358 KFDIDRDGFITPEELR----MHTGLKGS-------IDPLLEEADIDKDGRISLSEFRRLL 406
            +D+DRDG I+  E+     +  G++ +        D  ++EAD D DG +S  EF + L
Sbjct: 122 LYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSL 181

Query: 407 RTASISSR 414
               +  +
Sbjct: 182 EKMDVEQK 189

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens} Length = 202

 Score = 52.4 bits (126), Expect = 3e-08
 Identities = 23/114 (20%), Positives = 38/114 (33%), Gaps = 12/114 (10%)

Query: 244 MRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW 303
           +  F                   +     L   F   D+D++G IS  EM Q L   +  
Sbjct: 87  LAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGV 146

Query: 304 KLKE----SRVLEILQAIDCNTDGLVDFSEFVAA--------TLHVHQLEEHDS 345
           ++ E    +     +Q  D + DG V F EF  +         + +  L+ H  
Sbjct: 147 QVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEKMDVEQKMSIRILKHHHH 200

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score =  108 bits (272), Expect = 1e-26
 Identities = 49/187 (26%), Positives = 80/187 (42%), Gaps = 38/187 (20%)

Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           ++L+    CH  G++HRD+KP N +         L+  D+GL++F  PG+++   V S Y
Sbjct: 138 EILKALDYCHSMGIMHRDVKPHNVMIDHEHRK--LRLIDWGLAEFYHPGQEYNVRVASRY 195

Query: 134 YVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF------------------------ 167
           +  PE+L   +      D+WS+G +   ++  + PF                        
Sbjct: 196 FKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYD 255

Query: 168 -WDKTEDGIFKEVLRNKPDFRRKPW---------PSISNSAKDFVKKLLVKDPRARLTAA 217
             DK    +            RK W           +S  A DF+ KLL  D ++RLTA 
Sbjct: 256 YIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAR 315

Query: 218 QALSHPW 224
           +A+ HP+
Sbjct: 316 EAMEHPY 322

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A* Length = 321

 Score =  106 bits (266), Expect = 6e-26
 Identities = 56/193 (29%), Positives = 97/193 (50%), Gaps = 13/193 (6%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
            +GG L D +      R  E+  A V   +L+  A  H  G++HRD+K ++ L      D
Sbjct: 124 LQGGALTDIV---SQVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLT---LD 177

Query: 106 SSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYI-LLC 162
             +K +DFG    I     K + +VG+ Y++APEV+ R     E D+WS+G I  I ++ 
Sbjct: 178 GRVKLSDFGFCAQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLG-IMVIEMVD 236

Query: 163 GRRPFWDKTE-DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 221
           G  P++  +    + +      P  +      +S   +DF++++LV+DP+ R TA + L 
Sbjct: 237 GEPPYFSDSPVQAMKRLRDSPPPKLKNSH--KVSPVLRDFLERMLVRDPQERATAQELLD 294

Query: 222 HPWVREGGDASEI 234
           HP++ + G    +
Sbjct: 295 HPFLLQTGLPECL 307

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus} Length = 143

 Score =  101 bits (254), Expect = 6e-26
 Identities = 40/152 (26%), Positives = 72/152 (47%), Gaps = 16/152 (10%)

Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
            D  ++ + ++ F+ ID +++G I  E++   LA  +     +    E L+ +     G 
Sbjct: 1   FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLAS-MGKNPTD----EYLEGMMSEAPGP 55

Query: 325 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 381
           ++F+ F+  T+   +L   D E   +R   AF  FD +  GFI  + LR      G + +
Sbjct: 56  INFTMFL--TMFGEKLNGTDPED-VIR--NAFACFDEEASGFIHEDHLRELLTTMGDRFT 110

Query: 382 ---IDPLLEEADIDKDGRISLSEFRRLLRTAS 410
              +D +  EA IDK G  +  EF R+L+  +
Sbjct: 111 DEEVDEMYREAPIDKKGNFNYVEFTRILKHGA 142

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A* Length = 345

 Score =  106 bits (267), Expect = 7e-26
 Identities = 55/200 (27%), Positives = 97/200 (48%), Gaps = 28/200 (14%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC-HLHGLVHRDMKPENFLFKSAKE 104
             GG+L+  +  ++  +  E+ A     ++  +A    H  G+++RD+K +N L  S   
Sbjct: 92  VNGGDLMFHM--QRQRKLPEEHARFYSAEIS-LALNYLHERGIIYRDLKLDNVLLDS--- 145

Query: 105 DSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC 162
           +  +K TD+G+  + ++PG       G+  Y+APE+L+ +  G   D W++GV+ + ++ 
Sbjct: 146 EGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA 205

Query: 163 GRRPFW---------DKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRAR 213
           GR PF            TED +F+ +L  +    R    S+S  A   +K  L KDP+ R
Sbjct: 206 GRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKAASVLKSFLNKDPKER 261

Query: 214 L-----TAAQAL-SHPWVRE 227
           L     T    +  HP+ R 
Sbjct: 262 LGCHPQTGFADIQGHPFFRN 281

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A* Length = 576

 Score =  108 bits (272), Expect = 9e-26
 Identities = 50/186 (26%), Positives = 85/186 (45%), Gaps = 9/186 (4%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L  GG+L   I     + + E  A     ++     + H   +V+RD+KPEN L      
Sbjct: 265 LMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDD--- 321

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCG 163
              ++ +D GL+  +  G+  +  VG+  Y+APEV+K +      D W++G + Y ++ G
Sbjct: 322 HGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAG 381

Query: 164 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQ 218
           + PF  + +    +EV R   +   +     S  A+    +LL KDP  RL     +A +
Sbjct: 382 QSPFQQRKKKIKREEVERLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSARE 441

Query: 219 ALSHPW 224
              HP 
Sbjct: 442 VKEHPL 447

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B Length = 166

 Score =  101 bits (254), Expect = 1e-25
 Identities = 35/165 (21%), Positives = 63/165 (38%), Gaps = 15/165 (9%)

Query: 249 KYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 308
           K  R        + S  D+ E+ D ++ F  ID + +G I  +++R+  A      +K  
Sbjct: 3   KAKRRAAEGSSNVFSMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAAMGRLNVKN- 61

Query: 309 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 368
              E L A+     G ++F+ F+  T+   +L+  D E   +    AF+  D D  G I 
Sbjct: 62  ---EELDAMIKEASGPINFTVFL--TMFGEKLKGADPED-VIM--GAFKVLDPDGKGSIK 113

Query: 369 PEELR---MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 407
              L       G + +   I  +      D  G +       ++ 
Sbjct: 114 KSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVIT 158

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A Length = 229

 Score =  103 bits (257), Expect = 1e-25
 Identities = 36/195 (18%), Positives = 73/195 (37%), Gaps = 26/195 (13%)

Query: 231 ASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISL 290
             E  ++ SV + +       R +   L    S    +EL  L   F       +G ++ 
Sbjct: 27  LIEAGLEDSVEDELEMATVRHRPEALELLEAQSKFTKKELQILYRGFKNEC--PSGVVNE 84

Query: 291 EEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL 350
           E  ++  ++  P     +    +  A D + +G V F +F+     + +    +   W  
Sbjct: 85  ETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQEKLNW-- 142

Query: 351 RSQAAFEKFDIDRDGFITPEELRM------------------HTGLKGSIDPLLEEADID 392
               AF  +DI++DG+IT EE+                        +  ++   ++ D +
Sbjct: 143 ----AFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKN 198

Query: 393 KDGRISLSEFRRLLR 407
           KDG +++ EF    +
Sbjct: 199 KDGVVTIDEFIESCQ 213

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score =  104 bits (263), Expect = 1e-25
 Identities = 57/221 (25%), Positives = 84/221 (38%), Gaps = 39/221 (17%)

Query: 50  ELLDRILAKK-DSRYTEKDAAVV---VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
           E  D  +  + D         +V     Q L+    CH H  +HRD+KPEN L       
Sbjct: 82  EYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITK---H 138

Query: 106 SSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLC 162
           S +K  DFG +     P   + D V + +Y +PE+L    + GP  DVW+IG + +  L 
Sbjct: 139 SVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCV-FAELL 197

Query: 163 GRRPFW--DKTEDGIFK-------------EVLRNKPDFR-------------RKPWPSI 194
              P W      D ++              +V      F                 +P+I
Sbjct: 198 SGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNI 257

Query: 195 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP 235
           S  A   +K  L  DP  RLT  Q L HP+     +  ++ 
Sbjct: 258 SYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIREIEDLA 298

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A* Length = 297

 Score =  104 bits (261), Expect = 2e-25
 Identities = 56/193 (29%), Positives = 96/193 (49%), Gaps = 13/193 (6%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
             GG L D +    ++   E   A V R+ L+     H + ++HRD+K +N L      D
Sbjct: 99  LAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MD 152

Query: 106 SSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYI-LLC 162
            S+K TDFG    I P + K   +VG+ Y++APEV+ RK+ GP+ D+WS+G I  I ++ 
Sbjct: 153 GSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLG-IMAIEMIE 211

Query: 163 GRRPFWDKTE-DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 221
           G  P+ ++     ++       P+ +      +S   +DF+ + L  D   R +A + L 
Sbjct: 212 GEPPYLNENPLRALYLIATNGTPELQNPE--KLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269

Query: 222 HPWVREGGDASEI 234
           H +++     S +
Sbjct: 270 HQFLKIAKPLSSL 282

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7 Length = 355

 Score =  105 bits (264), Expect = 2e-25
 Identities = 61/197 (30%), Positives = 100/197 (50%), Gaps = 31/197 (15%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAK 103
             GGEL   +   +  R+TE +  + V ++  V A  HLH  G+++RD+K EN L     
Sbjct: 141 INGGELFTHL--SQRERFTEHEVQIYVGEI--VLALEHLHKLGIIYRDIKLENILL---- 192

Query: 104 EDSS--LKATDFGLS--DFIKPGKKFQDIVGSAYYVAPEVLKRKS---GPESDVWSIGVI 156
            DS+  +  TDFGLS        ++  D  G+  Y+AP++++          D WS+GV+
Sbjct: 193 -DSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVL 251

Query: 157 TYILLCGRRPFW----DKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRA 212
            Y LL G  PF       ++  I + +L+++P +   P   +S  AKD +++LL+KDP+ 
Sbjct: 252 MYELLTGASPFTVDGEKNSQAEISRRILKSEPPY---P-QEMSALAKDLIQRLLMKDPKK 307

Query: 213 RL-----TAAQALSHPW 224
           RL      A +   H +
Sbjct: 308 RLGCGPRDADEIKEHLF 324

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus} Length = 396

 Score =  105 bits (264), Expect = 3e-25
 Identities = 55/200 (27%), Positives = 97/200 (48%), Gaps = 28/200 (14%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC-HLHGLVHRDMKPENFLFKSAKE 104
             GG+L+  +  ++  +  E+ A     ++  +A    H  G+++RD+K +N L  S   
Sbjct: 135 VNGGDLMFHM--QRQRKLPEEHARFYSAEIS-LALNYLHERGIIYRDLKLDNVLLDS--- 188

Query: 105 DSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC 162
           +  +K TD+G+  + ++PG       G+  Y+APE+L+ +  G   D W++GV+ + ++ 
Sbjct: 189 EGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMA 248

Query: 163 GRRPFW---------DKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRAR 213
           GR PF            TED +F+ +L  +    R    S+S  A   +K  L KDP+ R
Sbjct: 249 GRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPR----SLSVKAASVLKSFLNKDPKER 304

Query: 214 L-----TAAQAL-SHPWVRE 227
           L     T    +  HP+ R 
Sbjct: 305 LGCHPQTGFADIQGHPFFRN 324

>3pvu_A Beta-adrenergic receptor kinase 1; transferase, serine/threonine-protein kinase, ATP-binding, I membrane; HET: QRW; 2.48A {Bos taurus} PDB: 3psc_A* 3pvw_A* 1omw_A 1ym7_A 2bcj_A* 3cik_A 3krw_A* 3krx_A* 1bak_A Length = 695

 Score =  107 bits (269), Expect = 3e-25
 Identities = 49/192 (25%), Positives = 83/192 (43%), Gaps = 24/192 (12%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSA 102
           L  GG+L   +   +   ++E D      ++  +    H+H   +V+RD+KP N L    
Sbjct: 273 LMNGGDLHYHL--SQHGVFSEADMRFYAAEI--ILGLEHMHNRFVVYRDLKPANILLD-- 326

Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSG--PESDVWSIGVITYIL 160
            E   ++ +D GL+      KK    VG+  Y+APEVL++       +D +S+G + + L
Sbjct: 327 -EHGHVRISDLGLACDF-SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKL 384

Query: 161 LCGRRPFWD---KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL--- 214
           L G  PF     K +  I +  L    +       S S   +  ++ LL +D   RL   
Sbjct: 385 LRGHSPFRQHKTKDKHEIDRMTLTMAVELP----DSFSPELRSLLEGLLQRDVNRRLGCL 440

Query: 215 --TAAQALSHPW 224
              A +    P+
Sbjct: 441 GRGAQEVKESPF 452

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 87

 Score = 97.2 bits (243), Expect = 4e-25
 Identities = 27/82 (32%), Positives = 50/82 (60%), Gaps = 1/82 (1%)

Query: 255 QFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEIL 314
               + +A  L +EE+  L++ F  ID D +G+I+ +E++  L K +  +L ES + +++
Sbjct: 7   DDDDKHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGL-KRVGSELMESEIKDLM 65

Query: 315 QAIDCNTDGLVDFSEFVAATLH 336
            A D +  G +D+ EF+AAT+H
Sbjct: 66  DAADIDKSGTIDYGEFIAATVH 87

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5 Length = 87

 Score = 61.4 bits (150), Expect = 3e-12
 Identities = 31/91 (34%), Positives = 42/91 (46%), Gaps = 18/91 (19%)

Query: 320 NTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK 379
           ++ G +D  +   A     +L E   E   L+    F+  D D  G IT +EL+   GLK
Sbjct: 1   HSSGHIDDDDKHMA----ERLSE--EEIGGLK--ELFKMIDTDNSGTITFDELK--DGLK 50

Query: 380 --GS------IDPLLEEADIDKDGRISLSEF 402
             GS      I  L++ ADIDK G I   EF
Sbjct: 51  RVGSELMESEIKDLMDAADIDKSGTIDYGEF 81

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Length = 191

 Score =  100 bits (251), Expect = 4e-25
 Identities = 32/151 (21%), Positives = 59/151 (39%), Gaps = 19/151 (12%)

Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 321
            S     +  +L + F A+D D +G+IS+ E+  AL+         +   ++L   D N 
Sbjct: 18  PSARHMNDNQELMEWFRAVDTDGSGAISVPELNAALSS-AGVPFSLATTEKLLHMYDKNH 76

Query: 322 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 378
            G + F EF      +  +            +  F K D   DG +   E+R   + +G 
Sbjct: 77  SGEITFDEFKDLHHFILSM------------REGFRKRDSSGDGRLDSNEVRAALLSSGY 124

Query: 379 KGS---IDPLLEEADIDKDGRISLSEFRRLL 406
           + S      L+ + D  + G +   ++  L 
Sbjct: 125 QVSEQTFQALMRKFDRQRRGSLGFDDYVELS 155

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8 Length = 191

 Score = 71.6 bits (176), Expect = 8e-15
 Identities = 19/99 (19%), Positives = 41/99 (41%), Gaps = 13/99 (13%)

Query: 270 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSE 329
           +  +R+ F   D   +G +   E+R AL     +++ E     +++  D    G + F +
Sbjct: 92  ILSMREGFRKRDSSGDGRLDSNEVRAAL-LSSGYQVSEQTFQALMRKFDRQRRGSLGFDD 150

Query: 330 FVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 368
           +V  ++ V ++               F  +D +R G +T
Sbjct: 151 YVELSIFVCRVRN------------VFAFYDRERTGQVT 177

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score =  103 bits (260), Expect = 5e-25
 Identities = 52/198 (26%), Positives = 79/198 (39%), Gaps = 35/198 (17%)

Query: 73  RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGS 131
            Q++     CH H ++HRD+KPEN L         +K  DFG +     PG+ + D V +
Sbjct: 131 FQIINGIGFCHSHNIIHRDIKPENILVSQ---SGVVKLCDFGFARTLAAPGEVYDDEVAT 187

Query: 132 AYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK---------- 177
            +Y APE+L    K G   DVW+IG +    +    P +  D   D ++           
Sbjct: 188 RWYRAPELLVGDVKYGKAVDVWAIGCL-VTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIP 246

Query: 178 ---EVLRNKPDFR-------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 221
              E+    P F               + +P +S    D  KK L  DP  R   A+ L 
Sbjct: 247 RHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306

Query: 222 HPWVREGGDASEIPIDIS 239
           H + +  G A     ++ 
Sbjct: 307 HDFFQMDGFAERFSQELQ 324

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B Length = 543

 Score =  106 bits (265), Expect = 6e-25
 Identities = 51/195 (26%), Positives = 90/195 (46%), Gaps = 24/195 (12%)

Query: 45  LCEGGELLDRI--LAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFK 100
           +  GG++   I  + + +  + E  A     Q+  V+   HLH   +++RD+KPEN L  
Sbjct: 266 IMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI--VSGLEHLHQRNIIYRDLKPENVLLD 323

Query: 101 SAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITY 158
               D +++ +D GL+ +      K +   G+  ++APE+L  +      D +++GV  Y
Sbjct: 324 D---DGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLY 380

Query: 159 ILLCGRRPFWDKTE----DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 214
            ++  R PF  + E      + + VL     +  K     S ++KDF + LL KDP  RL
Sbjct: 381 EMIAARGPFRARGEKVENKELKQRVLEQAVTYPDK----FSPASKDFCEALLQKDPEKRL 436

Query: 215 -----TAAQALSHPW 224
                +     +HP 
Sbjct: 437 GFRDGSCDGLRTHPL 451

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A Length = 450

 Score =  105 bits (263), Expect = 6e-25
 Identities = 44/150 (29%), Positives = 88/150 (58%), Gaps = 12/150 (8%)

Query: 263 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 322
             L +E++A+ ++ F   D D +G+I+ +E+   + + L     E+ + +++  +D + +
Sbjct: 304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVM-RSLGQNPTEAELQDMINEVDADGN 362

Query: 323 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLK 379
           G +DF EF+  T+   ++++ DSE+  +R   AF  FD D +G+I+  ELR    + G K
Sbjct: 363 GTIDFPEFL--TMMARKMKDTDSEEE-IR--EAFRVFDKDGNGYISAAELRHVMTNLGEK 417

Query: 380 GS---IDPLLEEADIDKDGRISLSEFRRLL 406
            +   +D ++ EADID DG+++  EF +++
Sbjct: 418 LTDEEVDEMIREADIDGDGQVNYEEFVQMM 447

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens} Length = 314

 Score =  102 bits (257), Expect = 8e-25
 Identities = 60/194 (30%), Positives = 95/194 (48%), Gaps = 13/194 (6%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
           C  G + D I+  ++   TE + A +++  L+     H    +HRD+K  N L      +
Sbjct: 106 CGAGSVSD-IIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLN---TE 161

Query: 106 SSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYI-LLC 162
              K  DFG++  +     K   ++G+ +++APEV++       +D+WS+G IT I +  
Sbjct: 162 GHAKLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLG-ITAIEMAE 220

Query: 163 GRRPFWDKTE-DGIFKEVLRNKPDFRRKP-WPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           G+ P+ D      IF       P FR+   W   S++  DFVK+ LVK P  R TA Q L
Sbjct: 221 GKPPYADIHPMRAIFMIPTNPPPTFRKPELW---SDNFTDFVKQCLVKSPEQRATATQLL 277

Query: 221 SHPWVREGGDASEI 234
            HP+VR     S +
Sbjct: 278 QHPFVRSAKGVSIL 291

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score =  101 bits (255), Expect = 1e-24
 Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 32/205 (15%)

Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           L +     +     +     + Q+L+    CH   ++HRD+KP+N L      +  LK  
Sbjct: 87  LKKYFDSCNGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINR---NGELKLA 143

Query: 112 DFGLS-DFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW 168
           +FGL+  F  P + +   V + +Y  P+VL   +      D+WS G I   L    RP +
Sbjct: 144 NFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLF 203

Query: 169 --DKTEDGIFK--EVL-----------RNKPDFRRKP-----------WPSISNSAKDFV 202
             +  +D + +   +L              PD++  P            P ++ + +D +
Sbjct: 204 PGNDVDDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLL 263

Query: 203 KKLLVKDPRARLTAAQALSHPWVRE 227
           + LL  +P  R++A +AL HP+  +
Sbjct: 264 QNLLKCNPVQRISAEEALQHPYFSD 288

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A Length = 226

 Score =  100 bits (250), Expect = 1e-24
 Identities = 47/193 (24%), Positives = 79/193 (40%), Gaps = 29/193 (15%)

Query: 235 PIDISVLN--NMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAID--VDKNGSISL 290
            +  SVL   ++  + +   L    L A  +     E+  L + F  I   V  +G I+ 
Sbjct: 10  HLCTSVLGCFDLDLYKQSGGLGDPELLARDTVFSVSEIEALYELFKKISSAVIDDGLINK 69

Query: 291 EEMRQALAKDLPWKLKESRVLE-ILQAIDCNTDGLVDFSEFVAA-TLHVHQLEEHDSEKW 348
           EE + AL K      KES   + +    D   +G++ F EF  A ++        D   +
Sbjct: 70  EEFQLALFKT---NKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHF 126

Query: 349 HLRSQAAFEKFDIDRDGFITPEELRM--------------HTGLKGSIDPLLEEADIDKD 394
                 +F+ +D+ + GFI  +E++                T ++  ID   EEAD   D
Sbjct: 127 ------SFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHD 180

Query: 395 GRISLSEFRRLLR 407
           G+I   E+R L+ 
Sbjct: 181 GKIDKEEWRSLVL 193

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} Length = 198

 Score = 99.1 bits (247), Expect = 2e-24
 Identities = 36/156 (23%), Positives = 61/156 (39%), Gaps = 21/156 (13%)

Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           L   E      +F       +G ++L E +Q              V ++ +  D N DG 
Sbjct: 11  LSATECHQWYKKFM--TECPSGQLTLYEFKQFFGLKNLSPSANKYVEQMFETFDFNKDGY 68

Query: 325 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---------- 374
           +DF E+VAA   V + +        LR    F+ +D+D +G I   EL            
Sbjct: 69  IDFMEYVAALSLVLKGKVDQ----KLRW--YFKLYDVDGNGCIDRGELLNIIKAIRAINR 122

Query: 375 ---HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 407
                  +   + + ++ DI+ DG +SL EF   ++
Sbjct: 123 CNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQ 158

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus} Length = 198

 Score = 48.6 bits (116), Expect = 8e-07
 Identities = 26/122 (21%), Positives = 37/122 (30%), Gaps = 8/122 (6%)

Query: 258 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES------RVL 311
           + AL+  L  +    LR  F   DVD NG I   E+   +                    
Sbjct: 75  VAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTN 134

Query: 312 EILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE 371
            +   ID N DG +   EF+        L +  +    L      +    D      PEE
Sbjct: 135 MVFDKIDINGDGELSLEEFMEGVQKDEVLLDILTRS--LDLTHIVKLIQNDGKNPHAPEE 192

Query: 372 LR 373
             
Sbjct: 193 AE 194

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166

 Score = 97.9 bits (244), Expect = 2e-24
 Identities = 26/154 (16%), Positives = 46/154 (29%), Gaps = 19/154 (12%)

Query: 273 LRDQFDAIDVDKNGSISLEE---MRQALAKDLPWKLKESRVLE-----------ILQAID 318
           +  +F   D D NG I   +     +A+  +     +  R              +    D
Sbjct: 6   IAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIAD 65

Query: 319 CNTDGLVDFSEFVAATLHVHQLEEHDSEKW-HLRSQAAFEKFDIDRDGFITPEELR---M 374
            + D  +   EFV   +   + +     +       AA    D D DG +T  +      
Sbjct: 66  RDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALT 125

Query: 375 HTGLKGS-IDPLLEEADIDKDGRISLSEFRRLLR 407
             G+            D D DG++  +E      
Sbjct: 126 AFGVPEDLARQAAAALDTDGDGKVGETEIVPAFA 159

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A Length = 166

 Score = 57.1 bits (138), Expect = 5e-10
 Identities = 15/71 (21%), Positives = 29/71 (40%), Gaps = 3/71 (4%)

Query: 263 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 322
               +     L       D D +G++++ +  +AL     + + E    +   A+D + D
Sbjct: 90  DRFAEMARPFLHAALGVADTDGDGAVTVADTARALTA---FGVPEDLARQAAAALDTDGD 146

Query: 323 GLVDFSEFVAA 333
           G V  +E V A
Sbjct: 147 GKVGETEIVPA 157

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A* Length = 302

 Score =  101 bits (254), Expect = 2e-24
 Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 24/202 (11%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
           C GG +   I+ + D   TE    VV RQML      H   ++HRD+K  N L      +
Sbjct: 98  CPGGAVDA-IMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMT---LE 153

Query: 106 SSLKATDFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKRKSGPES------DVWSIGVITY 158
             ++  DFG+S        K    +G+ Y++APEV+  ++  ++      D+WS+G IT 
Sbjct: 154 GDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLG-ITL 212

Query: 159 I-LLCGRRPFWD----KTEDGIFKEVLRNKPDFRRKP-WPSISNSAKDFVKKLLVKDPRA 212
           I +     P  +    +    + K    + P       W   S   +DF+K  L K+P  
Sbjct: 213 IEMAQIEPPHHELNPMRV---LLKIAKSDPPTLLTPSKW---SVEFRDFLKIALDKNPET 266

Query: 213 RLTAAQALSHPWVREGGDASEI 234
           R +AAQ L HP+V        +
Sbjct: 267 RPSAAQLLEHPFVSSITSNKAL 288

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score =  101 bits (253), Expect = 2e-24
 Identities = 58/204 (28%), Positives = 89/204 (43%), Gaps = 31/204 (15%)

Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           L ++L   +       A   + Q+L   A CH   ++HRD+KP+N L     E   LK  
Sbjct: 86  LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGE---LKIA 142

Query: 112 DFGLS-DFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW 168
           DFGL+  F  P +K+   + + +Y AP+VL   +K     D+WS+G I   ++ G   F 
Sbjct: 143 DFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFP 202

Query: 169 DKTE----DGIFK-----------------EVLRNKPDFRRKPW----PSISNSAKDFVK 203
             +E      IF+                 +   N   +   PW      +  S  D + 
Sbjct: 203 GVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLS 262

Query: 204 KLLVKDPRARLTAAQALSHPWVRE 227
           K+L  DP  R+TA QAL H + +E
Sbjct: 263 KMLKLDPNQRITAKQALEHAYFKE 286

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ... Length = 156

 Score = 97.2 bits (243), Expect = 3e-24
 Identities = 30/157 (19%), Positives = 73/157 (46%), Gaps = 17/157 (10%)

Query: 257 ALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQA 316
           A   + + L  +++ ++++ F  IDVD++G +S E+++    + L     +  +  +L+ 
Sbjct: 4   AASGVLTKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQ-LGRAPDDKELTAMLKE 62

Query: 317 IDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR--- 373
                 G ++F+ F+  ++   +L   DSE+  +R   AF  FD      +  E ++   
Sbjct: 63  A----PGPLNFTMFL--SIFSDKLSGTDSEE-TIR--NAFAMFDEQETKKLNIEYIKDLL 113

Query: 374 MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 407
            + G   +   +    +EA ++  G+    +F  +++
Sbjct: 114 ENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIK 149

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263

 Score =  100 bits (250), Expect = 3e-24
 Identities = 31/167 (18%), Positives = 62/167 (37%), Gaps = 30/167 (17%)

Query: 268 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR------VLEILQAIDCNT 321
              +   + +   D D +G +  +E++  + ++L    K++       +   +       
Sbjct: 13  ITASQFFEIWLHFDADGSGYLEGKELQNLI-QELLQARKKAGLELSPEMKTFVDQYGQRD 71

Query: 322 DGLVDFSEFVA------ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-- 373
           DG +   E           L + + ++  S +        + K+D D  GFI  EEL+  
Sbjct: 72  DGKIGIVELAHVLPTEENFLLLFRCQQLKSCE-EFM--KTWRKYDTDHSGFIETEELKNF 128

Query: 374 -MHTGLKGS-----------IDPLLEEADIDKDGRISLSEFRRLLRT 408
                 K +            D +L+  D + DG++ L+E  RLL  
Sbjct: 129 LKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPV 175

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A Length = 263

 Score = 97.6 bits (243), Expect = 3e-23
 Identities = 31/186 (16%), Positives = 58/186 (31%), Gaps = 23/186 (12%)

Query: 243 NMRQFVK-YSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALA--- 298
            + +        + F L      L   E  +    +   D D +G I  EE++  L    
Sbjct: 76  GIVELAHVLPTEENFLLLFRCQQLKSCE--EFMKTWRKYDTDHSGFIETEELKNFLKDLL 133

Query: 299 ----KDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA--ATLHVHQLEEHDSEKWHLRS 352
               K +           +L+  D N DG ++ +E            L+    +      
Sbjct: 134 EKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEF 193

Query: 353 QAAFEKFDIDRDGFITPEELRM---HTGLKGSIDPLLEE--------ADIDKDGRISLSE 401
             AFE +D D +G+I   EL         K   +  +            +   G++  ++
Sbjct: 194 NKAFELYDQDGNGYIDENELDALLKDLCEKNKQELDINNISTYKKNIMALSDGGKLYRTD 253

Query: 402 FRRLLR 407
              +L 
Sbjct: 254 LALILS 259

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii} Length = 191

 Score = 98.0 bits (244), Expect = 4e-24
 Identities = 27/168 (16%), Positives = 45/168 (26%), Gaps = 22/168 (13%)

Query: 262 ASTLDDEELADLRDQFDAI-DVDKNGSIS---LEEMRQALAKDLPWKLKESRVLE----- 312
           A  L D +   +   F+   D + +G I     E   + +     W     +  E     
Sbjct: 3   AHQLSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKKICNLHSWPTDGKKHNEARATL 62

Query: 313 ------ILQAIDCNTDGLVDFSEFVAA---TLHVHQLEEHDSEKWHLRSQAAFEKFDIDR 363
                 + +  D N D  V   E++      +   +  E   E         F+  D   
Sbjct: 63  KLIWDGLRKYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSG 122

Query: 364 DGFITPEELRMHTGLKGS----IDPLLEEADIDKDGRISLSEFRRLLR 407
           D  I   E        G      D   +         ++   F RL  
Sbjct: 123 DNIIDKHEYSTVYMSYGIPKSDCDAAFDTLSDGGKTMVTREIFARLWT 170

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score =  101 bits (253), Expect = 4e-24
 Identities = 50/187 (26%), Positives = 77/187 (41%), Gaps = 31/187 (16%)

Query: 72  VRQMLRVAAECHLHGLVHRDMKPENFLF--KSAKEDSSLKATDFGLS-DFIKPGKKFQDI 128
           + Q++     CH    +HRD+KP+N L     A E   LK  DFGL+  F  P ++F   
Sbjct: 138 LYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHE 197

Query: 129 VGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFK----- 177
           + + +Y  PE+L   R      D+WSI  I   +L     F   +E      IF+     
Sbjct: 198 IITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLP 257

Query: 178 ------------EVLRNKPDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQAL 220
                       +  ++ P FR K         + +   D +  +L  DP  R++A  AL
Sbjct: 258 DDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNAL 317

Query: 221 SHPWVRE 227
            HP+   
Sbjct: 318 EHPYFSH 324

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A* Length = 303

 Score =  100 bits (250), Expect = 7e-24
 Identities = 52/192 (27%), Positives = 88/192 (45%), Gaps = 13/192 (6%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
             GG  LD +   +     E   A ++R++L+     H    +HRD+K  N L     E 
Sbjct: 102 LGGGSALDLL---EPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS---EH 155

Query: 106 SSLKATDFGLSDFIKP-GKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYI-LLC 162
             +K  DFG++  +     K    VG+ +++APEV+K+ +   ++D+WS+G IT I L  
Sbjct: 156 GEVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLG-ITAIELAR 214

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           G  P  +     +   + +N P      +   S   K+FV+  L K+P  R TA + L H
Sbjct: 215 GEPPHSELHPMKVLFLIPKNNPPTLEGNY---SKPLKEFVEACLNKEPSFRPTAKELLKH 271

Query: 223 PWVREGGDASEI 234
            ++      +  
Sbjct: 272 KFILRNAKKTSY 283

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A* Length = 327

 Score =  100 bits (250), Expect = 8e-24
 Identities = 51/208 (24%), Positives = 83/208 (39%), Gaps = 22/208 (10%)

Query: 45  LCEGG--ELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH---GLVHRDMKPENFLF 99
           L      +    + +  D    E+    +    ++  A  HL     ++HRD+KP N L 
Sbjct: 102 LMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVK--ALNHLKENLKIIHRDIKPSNILL 159

Query: 100 KSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPE-----SDVWSIG 154
             +     +K  DFG+S  +          G   Y+APE +   +  +     SDVWS+G
Sbjct: 160 DRSGN---IKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLG 216

Query: 155 VITYI-LLCGRRPF--WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPR 211
            IT   L  GR P+  W+   D + + V  + P          S S  +FV   L KD  
Sbjct: 217 -ITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDES 275

Query: 212 ARLTAAQALSHPWVREGGDASEIPIDIS 239
            R    + L HP++       E  ++++
Sbjct: 276 KRPKYKELLKHPFILM---YEERAVEVA 300

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus} Length = 256

 Score = 98.6 bits (245), Expect = 9e-24
 Identities = 38/232 (16%), Positives = 76/232 (32%), Gaps = 32/232 (13%)

Query: 197 SAKDFVKKLLVKDPRARLTAAQALS---HPWVREGGDASEIPIDISVLNNMRQFVKYSRL 253
                 K+  +K  R R T    +      W+             S L       +   L
Sbjct: 20  GRIPLSKRESIKWQRPRFTRQALMRCCLIKWILSSAAPQGSDSSDSELELSTVRHQPEGL 79

Query: 254 KQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEI 313
            Q   +   +    +EL  L   F        G +  +  +   ++  P     +    +
Sbjct: 80  DQLQAQ---TKFTKKELQSLYRGFKNEC--PTGLVDEDTFKLIYSQFFPQGDATTYAHFL 134

Query: 314 LQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR 373
             A D + +G + F +FV     + +   H+      + + AF  +DI++DG IT EE+ 
Sbjct: 135 FNAFDADGNGAIHFEDFVVGLSILLRGTVHE------KLKWAFNLYDINKDGCITKEEML 188

Query: 374 M------------------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 407
                                     ++   ++ D ++DG +++ EF    +
Sbjct: 189 AIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQ 240

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5 Length = 204

 Score = 96.8 bits (241), Expect = 1e-23
 Identities = 41/205 (20%), Positives = 79/205 (38%), Gaps = 35/205 (17%)

Query: 249 KYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 308
           ++S  +     A+    D  +L +   +F  ++   +G++ + E ++   K    +    
Sbjct: 4   QFSWEEAEENGAV-GAADAAQLQEWYKKF--LEECPSGTLFMHEFKRFF-KVPDNEEATQ 59

Query: 309 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 368
            V  + +A D N D  +DF E+VAA   V +       KW       F+ +D DR+G I 
Sbjct: 60  YVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKW------TFKIYDKDRNGCID 113

Query: 369 PEELR-----------------------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRL 405
            +EL                             +  +D +    D + DG++SL+EF   
Sbjct: 114 RQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEG 173

Query: 406 LRT--ASISSRNVPPSPSGHRNPRK 428
            R     +    +  +PS   + ++
Sbjct: 174 ARRDKWVMKMLQMDLNPSSWISQQR 198

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A* Length = 303

 Score = 98.6 bits (246), Expect = 2e-23
 Identities = 58/210 (27%), Positives = 93/210 (44%), Gaps = 25/210 (11%)

Query: 44  RLCEGGELLD------RILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENF 97
           +L  GG +LD           K     E   A ++R++L      H +G +HRD+K  N 
Sbjct: 93  KLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNI 152

Query: 98  LFKSAKEDSSLKATDFGLSDFI------KPGKKFQDIVGSAYYVAPEVLKRKSG--PESD 149
           L     ED S++  DFG+S F+         K  +  VG+  ++APEV+++  G   ++D
Sbjct: 153 LLG---EDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKAD 209

Query: 150 VWSIGVITYI-LLCGRRPFWDKTEDGIFKEVLRNKP------DFRRKPWPSISNSAKDFV 202
           +WS G IT I L  G  P+       +    L+N P         ++       S +  +
Sbjct: 210 IWSFG-ITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMI 268

Query: 203 KKLLVKDPRARLTAAQALSHPWVREGGDAS 232
              L KDP  R TAA+ L H + ++  +  
Sbjct: 269 SLCLQKDPEKRPTAAELLRHKFFQKAKNKE 298

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens} Length = 318

 Score = 99.0 bits (247), Expect = 2e-23
 Identities = 51/218 (23%), Positives = 90/218 (41%), Gaps = 33/218 (15%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH---GLVHRDMKPENFLFKS 101
           L       +++  +      E+    +   +++  A  +L    G++HRD+KP N L   
Sbjct: 105 LMGTC--AEKLKKRMQGPIPERILGKMTVAIVK--ALYYLKEKHGVIHRDVKPSNILLDE 160

Query: 102 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPE------SDVWSIGV 155
             +   +K  DFG+S  +   K      G A Y+APE +      +      +DVWS+G 
Sbjct: 161 RGQ---IKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLG- 216

Query: 156 ITYI-LLCGRRPFWDKTEDGIFK---EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPR 211
           I+ + L  G+ P+  K     F+   +VL+ +P          S   + FVK  L KD R
Sbjct: 217 ISLVELATGQFPY--KNCKTDFEVLTKVLQEEPP-LLPGHMGFSGDFQSFVKDCLTKDHR 273

Query: 212 ARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVK 249
            R    + L H +++       + +D      +  + K
Sbjct: 274 KRPKYNKLLEHSFIKR---YETLEVD------VASWFK 302

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A Length = 207

 Score = 96.0 bits (239), Expect = 3e-23
 Identities = 42/184 (22%), Positives = 73/184 (39%), Gaps = 27/184 (14%)

Query: 243 NMRQFVKYSRLKQFALRALAST--LDDEELADLRDQFDAIDVD--KNGSISLEEMRQALA 298
             ++              LAS      EE+  L + F  +      +G I  EE + AL 
Sbjct: 7   KKKKKNAMRPPGYEDPELLASVTPFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALF 66

Query: 299 KDLPWKLKESRVLE-ILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFE 357
           ++   + + +   + I    D   +G+++F EFV + L V        EK       AF+
Sbjct: 67  RN---RNRRNLFADRIFDVFDVKRNGVIEFGEFVRS-LGVFHPSAPVHEKVKF----AFK 118

Query: 358 KFDIDRDGFITPEELR-------MHTGLKGS-------IDPLLEEADIDKDGRISLSEFR 403
            +D+ + GFI  EEL+         + L  S       +D    +AD   DG+I + E++
Sbjct: 119 LYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWK 178

Query: 404 RLLR 407
             + 
Sbjct: 179 DFVS 182

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score = 98.0 bits (245), Expect = 4e-23
 Identities = 55/205 (26%), Positives = 94/205 (45%), Gaps = 32/205 (15%)

Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           L ++L +  +   +    + + Q+LR  A CH H ++HRD+KP+N L  S   D +LK  
Sbjct: 105 LKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINS---DGALKLA 161

Query: 112 DFGLS-DFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW 168
           DFGL+  F  P + +   V + +Y AP+VL   +K     D+WSIG I   ++ G+  F 
Sbjct: 162 DFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFP 221

Query: 169 DKTE----DGIFKEV----------LRNKPDFR------------RKPWPSISNSAKDFV 202
             T+      IF  +          ++  P ++                P       D +
Sbjct: 222 GVTDDDQLPKIFSILGTPNPREWPQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLL 281

Query: 203 KKLLVKDPRARLTAAQALSHPWVRE 227
             +L  DP  R++A  A++HP+ ++
Sbjct: 282 SNMLCFDPNKRISARDAMNHPYFKD 306

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score = 98.1 bits (245), Expect = 4e-23
 Identities = 51/205 (24%), Positives = 86/205 (41%), Gaps = 32/205 (15%)

Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           L + L    +     +  + + Q+LR  A CH   ++HRD+KP+N L     E   LK  
Sbjct: 86  LKQYLDDCGNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLIN---ERGELKLA 142

Query: 112 DFGLS-DFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW 168
           DFGL+     P K + + V + +Y  P++L        + D+W +G I Y +  GR  F 
Sbjct: 143 DFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFP 202

Query: 169 DKTE----DGIFKEV----------LRNKPDFR------------RKPWPSISNSAKDFV 202
             T       IF+ +          + +  +F+                P + +   D +
Sbjct: 203 GSTVEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLL 262

Query: 203 KKLLVKDPRARLTAAQALSHPWVRE 227
            KLL  + R R++A  A+ HP+   
Sbjct: 263 TKLLQFEGRNRISAEDAMKHPFFLS 287

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172

 Score = 94.2 bits (235), Expect = 5e-23
 Identities = 36/147 (24%), Positives = 58/147 (39%), Gaps = 18/147 (12%)

Query: 266 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 325
              + + L + F  +D D++G IS  E++QAL+           V  I+   D      V
Sbjct: 2   ALPDQSFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGV 61

Query: 326 DFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---HTGLKGS- 381
           +FSEF     ++          W    Q  F  +D D  G I   EL+      G + S 
Sbjct: 62  NFSEFTGVWKYI--------TDW----QNVFRTYDRDNSGMIDKNELKQALSGFGYRLSD 109

Query: 382 --IDPLLEEADIDKDGRISLSEFRRLL 406
              D L+ + D    G+I+  +F +  
Sbjct: 110 QFHDILIRKFDRQGRGQIAFDDFIQGC 136

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A Length = 172

 Score = 71.5 bits (176), Expect = 5e-15
 Identities = 22/99 (22%), Positives = 45/99 (45%), Gaps = 13/99 (13%)

Query: 270 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSE 329
           + D ++ F   D D +G I   E++QAL     ++L +     +++  D    G + F +
Sbjct: 73  ITDWQNVFRTYDRDNSGMIDKNELKQAL-SGFGYRLSDQFHDILIRKFDRQGRGQIAFDD 131

Query: 330 FVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 368
           F+   + + +L +             F ++D D+DG+I 
Sbjct: 132 FIQGCIVLQRLTD------------IFRRYDTDQDGWIQ 158

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5 Length = 193

 Score = 94.9 bits (236), Expect = 5e-23
 Identities = 36/177 (20%), Positives = 73/177 (41%), Gaps = 28/177 (15%)

Query: 251 SRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 308
           S+L+   ++ L  +    + E+ +    F  +    +G +S+EE ++      P+     
Sbjct: 6   SKLRPEVMQDLLESTDFTEHEIQEWYKGF--LRDCPSGHLSMEEFKKIYGNFFPYGDASK 63

Query: 309 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 368
               + +  D N DG +DF EF+ A     + +     KW      AF  +D+D +G+I+
Sbjct: 64  FAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKW------AFSMYDLDGNGYIS 117

Query: 369 PEELRM------------------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 407
             E+                     +  +   + +  + D ++DG++SL EF R  +
Sbjct: 118 KAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAK 174

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp} Length = 294

 Score = 97.3 bits (243), Expect = 5e-23
 Identities = 45/178 (25%), Positives = 76/178 (42%), Gaps = 9/178 (5%)

Query: 47  EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 106
           EG  L + I  +     +   A     Q+L      H   +VHRD+KP+N L      + 
Sbjct: 94  EGPTLSEYI--ESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILI---DSNK 148

Query: 107 SLKATDFGLSDFIKPGKKFQD--IVGSAYYVAPE-VLKRKSGPESDVWSIGVITYILLCG 163
           +LK  DFG++  +      Q   ++G+  Y +PE      +   +D++SIG++ Y +L G
Sbjct: 149 TLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVG 208

Query: 164 RRPFWDKTEDGI-FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
             PF  +T   I  K +  + P+        I  S  + + +   KD   R    Q +
Sbjct: 209 EPPFNGETAVSIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEM 266

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A* Length = 311

 Score = 96.9 bits (242), Expect = 9e-23
 Identities = 45/179 (25%), Positives = 77/179 (43%), Gaps = 10/179 (5%)

Query: 47  EGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS 106
           +G  L D +    +   T K A  V+    +     H +G++HRD+KP N +       +
Sbjct: 99  DGVTLRDIV--HTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMI---SATN 153

Query: 107 SLKATDFGL----SDFIKPGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITYILL 161
           ++K  DFG+    +D      +   ++G+A Y++PE          SDV+S+G + Y +L
Sbjct: 154 AVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVL 213

Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
            G  PF   +   +  + +R  P         +S      V K L K+P  R   A  +
Sbjct: 214 TGEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEM 272

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A* Length = 348

 Score = 97.1 bits (242), Expect = 1e-22
 Identities = 55/195 (28%), Positives = 82/195 (42%), Gaps = 18/195 (9%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
           C G    D +L        E + A V    L+  A  H H ++HRD+K  N L     E 
Sbjct: 136 CLGS-ASD-LLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS---EP 190

Query: 106 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS----GPESDVWSIGVITYI-L 160
             +K  DFG +  + P   F   VG+ Y++APEV+          + DVWS+G IT I L
Sbjct: 191 GLVKLGDFGSASIMAPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLG-ITCIEL 246

Query: 161 LCGRRPFWDKTE-DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA 219
              + P ++      ++       P  +   W   S   ++FV   L K P+ R T+   
Sbjct: 247 AERKPPLFNMNAMSALYHIAQNESPALQSGHW---SEYFRNFVDSCLQKIPQDRPTSEVL 303

Query: 220 LSHPWVREGGDASEI 234
           L H +V      + I
Sbjct: 304 LKHRFVLRERPPTVI 318

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A Length = 290

 Score = 95.8 bits (239), Expect = 1e-22
 Identities = 55/220 (25%), Positives = 86/220 (39%), Gaps = 36/220 (16%)

Query: 45  LCEGGELLDRILA---KKDSRYTEKDAAVVVRQMLRVAAECHLHG---LVHRDMKPENFL 98
           L +    LD+       K     E     +   +++  A  HLH    ++HRD+KP N L
Sbjct: 87  LMDTS--LDKFYKQVIDKGQTIPEDILGKIAVSIVK--ALEHLHSKLSVIHRDVKPSNVL 142

Query: 99  FKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPE-----SDVWS 152
             +  +   +K  DFG+S   +    K  D  G   Y+APE +  +   +     SD+WS
Sbjct: 143 INALGQ---VKMCDFGISGYLVDDVAKDID-AGCKPYMAPERINPELNQKGYSVKSDIWS 198

Query: 153 IGVITYI-LLCGRRPF--WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKD 209
           +G IT I L   R P+  W      + + V    P      +   S    DF  + L K+
Sbjct: 199 LG-ITMIELAILRFPYDSWGTPFQQLKQVVEEPSPQLPADKF---SAEFVDFTSQCLKKN 254

Query: 210 PRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVK 249
            + R T  + + HP+            D      +  FVK
Sbjct: 255 SKERPTYPELMQHPFFT---LHESKGTD------VASFVK 285

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score = 97.4 bits (243), Expect = 2e-22
 Identities = 54/181 (29%), Positives = 77/181 (42%), Gaps = 29/181 (16%)

Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           Q+LR  A  H  G+ HRD+KP+N L         LK  DFG +  +  G+     + S Y
Sbjct: 149 QLLRSLAYIHSIGICHRDIKPQNLLLDP--PSGVLKLIDFGSAKILIAGEPNVSYICSRY 206

Query: 134 YVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFK-------EVL 180
           Y APE++          D+WS G +   L+ G+  F  ++       I K       E +
Sbjct: 207 YRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSREQI 266

Query: 181 RNK---------PDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 226
           +           P  R  P+     P     A D + +LL   P ARLTA +AL HP+  
Sbjct: 267 KTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFD 326

Query: 227 E 227
           E
Sbjct: 327 E 327

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score = 97.5 bits (243), Expect = 3e-22
 Identities = 51/182 (28%), Positives = 72/182 (39%), Gaps = 31/182 (17%)

Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           Q+ R  A  H  G+ HRD+KP+N L         LK  DFG +  +  G+     + S Y
Sbjct: 164 QLFRSLAYIHSFGICHRDIKPQNLLLDPDTAV--LKLCDFGSAKQLVRGEPNVSYICSRY 221

Query: 134 YVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW--DKTEDGIFK--EVL------- 180
           Y APE++          DVWS G +   LL   +P +  D   D + +  +VL       
Sbjct: 222 YRAPELIFGATDYTSSIDVWSAGCVLAELL-LGQPIFPGDSGVDQLVEIIKVLGTPTREQ 280

Query: 181 ----------RNKPDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
                        P  +  PW     P     A     +LL   P ARLT  +A +H + 
Sbjct: 281 IREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLEACAHSFF 340

Query: 226 RE 227
            E
Sbjct: 341 DE 342

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 95.4 bits (238), Expect = 3e-22
 Identities = 53/197 (26%), Positives = 82/197 (41%), Gaps = 38/197 (19%)

Query: 74  QMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI--- 128
           Q+LR     ++H   ++HRD+KP N    +  ED  LK  DFGL+  + P    +     
Sbjct: 128 QLLR--GLKYIHSANVLHRDLKPANLFINT--EDLVLKIGDFGLARIMDPHYSHKGHLSE 183

Query: 129 -VGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF--------WDK------- 170
            + + +Y +P +L          D+W+ G I   +L G+  F                  
Sbjct: 184 GLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPV 243

Query: 171 -TEDGI------FKEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQA 219
             E+            +RN      KP     P IS  A DF++++L   P  RLTA +A
Sbjct: 244 VHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRLTAEEA 303

Query: 220 LSHPWVREGGDASEIPI 236
           LSHP++       + PI
Sbjct: 304 LSHPYMSIYSFPMDEPI 320

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272

 Score = 94.7 bits (235), Expect = 3e-22
 Identities = 34/180 (18%), Positives = 62/180 (34%), Gaps = 36/180 (20%)

Query: 263 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVL----------E 312
           S   + + A     +   D D NG I  +E+     + +  KL+    +           
Sbjct: 3   SAFANLDAAGFLQIWQHFDADDNGYIEGKELDDFF-RHMLKKLQPKDKITDERVQQIKKS 61

Query: 313 ILQAIDCNTDGLVDFSEFVAATL--------HVHQLEEHDSEKWHLRSQAAFEKFDIDRD 364
            + A D   DG +   E     L           +    D+    ++    + K+D D  
Sbjct: 62  FMSAYDATFDGRLQIEELANMILPQEENFLLIFRREAPLDNSVEFMK---IWRKYDADSS 118

Query: 365 GFITPEELRM--------------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTAS 410
           G+I+  EL+                  L    D +++  D +KDGR+ L++  R+L    
Sbjct: 119 GYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQE 178

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272

 Score = 90.5 bits (224), Expect = 1e-20
 Identities = 32/176 (18%), Positives = 59/176 (33%), Gaps = 27/176 (15%)

Query: 258 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALA-------KDLPWKLKESRV 310
           L         +   +    +   D D +G IS  E++  L        K +P    +   
Sbjct: 91  LLIFRREAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYT 150

Query: 311 LEILQAIDCNTDGLVDFSEFVA------ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRD 364
             +++  D N DG +D ++           L   +++     +     +  F  +D+ R 
Sbjct: 151 DAMMKIFDKNKDGRLDLNDLARILALQENFLLQFKMDASSQVERKRDFEKIFAHYDVSRT 210

Query: 365 GFITPEELRM--------------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLL 406
           G +   E+                   L    + LL   D++KDG+I  SE    L
Sbjct: 211 GALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHCDMNKDGKIQKSELALCL 266

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272

 Score = 55.8 bits (134), Expect = 5e-09
 Identities = 25/188 (13%), Positives = 58/188 (30%), Gaps = 37/188 (19%)

Query: 257 ALRALASTLDDEELAD-------LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR 309
             R +   L  ++           +    A D   +G + +EE+   +       L   R
Sbjct: 36  FFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMILPQEENFLLIFR 95

Query: 310 ----------VLEILQAIDCNTDGLVDFSEF--VAATLHVHQLEEHDSEKWHLRSQAAFE 357
                      ++I +  D ++ G +  +E       L +   ++    K    + A  +
Sbjct: 96  REAPLDNSVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMK 155

Query: 358 KFDIDRDGFITPEELRMHTGLKGSIDPLLEEA------------------DIDKDGRISL 399
            FD ++DG +   +L     L+ +     +                    D+ + G +  
Sbjct: 156 IFDKNKDGRLDLNDLARILALQENFLLQFKMDASSQVERKRDFEKIFAHYDVSRTGALEG 215

Query: 400 SEFRRLLR 407
            E    ++
Sbjct: 216 PEVDGFVK 223

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A Length = 272

 Score = 47.0 bits (111), Expect = 5e-06
 Identities = 23/140 (16%), Positives = 45/140 (32%), Gaps = 13/140 (9%)

Query: 253 LKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLK------ 306
           LK   L+       ++            D +K+G + L ++ + LA    + L+      
Sbjct: 130 LKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQENFLLQFKMDAS 189

Query: 307 -----ESRVLEILQAIDCNTDGLVDFSEF--VAATLHVHQLEEHDSEKWHLRSQAAFEKF 359
                +    +I    D +  G ++  E       +                 +      
Sbjct: 190 SQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHC 249

Query: 360 DIDRDGFITPEELRMHTGLK 379
           D+++DG I   EL +  GLK
Sbjct: 250 DMNKDGKIQKSELALCLGLK 269

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis} Length = 681

 Score = 97.6 bits (243), Expect = 5e-22
 Identities = 38/174 (21%), Positives = 71/174 (40%), Gaps = 20/174 (11%)

Query: 48  GGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS 107
           GG+ L R   +   +    +A   + ++L   +  H  GLV+ D+KPEN +      +  
Sbjct: 167 GGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIML----TEEQ 219

Query: 108 LKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPF 167
           LK  D G          F  + G+  + APE+++      +D++++G     L       
Sbjct: 220 LKLIDLGAV---SRINSFGYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLPTR 276

Query: 168 WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 221
                +G + + L         P     +S    +++ +  DPR R T A+ +S
Sbjct: 277 -----NGRYVDGLPEDD-----PVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMS 320

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score = 94.6 bits (236), Expect = 8e-22
 Identities = 55/189 (29%), Positives = 81/189 (42%), Gaps = 36/189 (19%)

Query: 72  VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPGKKFQDIVG 130
             Q+L+  A CH + ++HRD+KP+N L     +   LK  DFGL+  F  P   F   V 
Sbjct: 114 QWQLLQGLAFCHENKILHRDLKPQNLLINKRGQ---LKLGDFGLARAFGIPVNTFSSEVV 170

Query: 131 SAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFK------- 177
           + +Y AP+VL   R      D+WS G I   ++ G+  F    +      IF        
Sbjct: 171 TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNE 230

Query: 178 ------EVLRN-KPDFRRKP------------WPSISNSAKDFVKKLLVKDPRARLTAAQ 218
                   L    P+ +++P               +  +  DF+  LL  +P  RL+A Q
Sbjct: 231 SLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQ 290

Query: 219 ALSHPWVRE 227
           AL HPW  E
Sbjct: 291 ALHHPWFAE 299

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score = 94.2 bits (235), Expect = 8e-22
 Identities = 47/180 (26%), Positives = 76/180 (42%), Gaps = 27/180 (15%)

Query: 72  VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 131
           +RQ LR     H + +VHRD+KPEN L  S     ++K  DFGL+           +V +
Sbjct: 126 MRQFLRGLDFLHANCIVHRDLKPENILVTS---GGTVKLADFGLARIYSYQMALTPVVVT 182

Query: 132 AYYVAPEVL-KRKSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFKEV------- 179
            +Y APEVL +       D+WS+G I   +   +  F   +E      IF  +       
Sbjct: 183 LWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDD 242

Query: 180 ---LRNKPDFRRKPW---------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
                + P     P          P +  S    + ++L  +P  R++A +AL H ++ +
Sbjct: 243 WPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHK 302

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe} Length = 190

 Score = 91.0 bits (226), Expect = 1e-21
 Identities = 36/177 (20%), Positives = 71/177 (40%), Gaps = 28/177 (15%)

Query: 251 SRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 308
           S+L Q  L+ L  +   D +EL      F       +G ++  E ++   +  P+    +
Sbjct: 6   SKLSQDQLQDLVRSTRFDKKELQQWYKGFFKDC--PSGHLNKSEFQKIYKQFFPFGDPSA 63

Query: 309 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 368
               +    D + +G +DF EF+ A     + E +D   W      AF+ +D+D +G I+
Sbjct: 64  FAEYVFNVFDADKNGYIDFKEFICALSVTSRGELNDKLIW------AFQLYDLDNNGLIS 117

Query: 369 PEELRM------------------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 407
            +E+                        +  ++ +    D +KDG+++L EF    +
Sbjct: 118 YDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSK 174

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia} Length = 196

 Score = 90.8 bits (226), Expect = 2e-21
 Identities = 40/163 (24%), Positives = 70/163 (42%), Gaps = 17/163 (10%)

Query: 251 SRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRV 310
            R  Q +   + +     ++ + ++ F  ID DK+G IS  ++R      L     E  +
Sbjct: 37  KRRAQRSGSNVFAMFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDS-LGRLCTEQEL 95

Query: 311 LEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 370
             ++        G ++F+ F+  T+   ++   D E   +    AF  FD + DG    E
Sbjct: 96  DSMVA----EAPGPINFTMFL--TIFGDRIAGTDEEDV-IV--NAFNLFD-EGDGKCKEE 145

Query: 371 ELR---MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 407
            L+      G K S   +D  L EA ID +G I + +F ++L 
Sbjct: 146 TLKRSLTTWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQILT 188

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score = 93.8 bits (234), Expect = 2e-21
 Identities = 47/179 (26%), Positives = 72/179 (40%), Gaps = 27/179 (15%)

Query: 73  RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 132
            Q+LR     H H +VHRD+KP+N L  S+ +   +K  DFGL+           +V + 
Sbjct: 127 FQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQ---IKLADFGLARIYSFQMALTSVVVTL 183

Query: 133 YYVAPEVL-KRKSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFK---------- 177
           +Y APEVL +       D+WS+G I   +   +  F   ++      I            
Sbjct: 184 WYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDW 243

Query: 178 ---------EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
                               K    I    KD + K L  +P  R++A  ALSHP+ ++
Sbjct: 244 PRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQD 302

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 93.5 bits (233), Expect = 2e-21
 Identities = 59/192 (30%), Positives = 79/192 (41%), Gaps = 34/192 (17%)

Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           QML+     H  G+VHRD+KP N       ED  LK  DFGL+            V + +
Sbjct: 134 QMLKGLKYIHSAGVVHRDLKPGNLA---VNEDCELKILDFGLARHADAEMT--GYVVTRW 188

Query: 134 YVAPEVL--KRKSGPESDVWSIGVITYILLCGR-----------------------RPFW 168
           Y APEV+          D+WS+G I   +L G+                         F 
Sbjct: 189 YRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFV 248

Query: 169 DKTEDGIFKEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 224
            K  D   K  +++ P   RK +    P  S  A D ++K+L  D   RLTAAQAL+HP+
Sbjct: 249 QKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPF 308

Query: 225 VREGGDASEIPI 236
                D  E   
Sbjct: 309 FEPFRDPEEETE 320

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5 Length = 185

 Score = 90.0 bits (223), Expect = 3e-21
 Identities = 27/165 (16%), Positives = 59/165 (35%), Gaps = 22/165 (13%)

Query: 265 LDDEELADLRDQFDAI-DVDKNGSISLEE---MRQALAKDLPWKLKESRVLEILQAI--- 317
           L+D +   ++  FD   D++ +GSI   +   M     +     L ++    +  ++   
Sbjct: 2   LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDE 61

Query: 318 --------DCNTDGLVDFSEFVAA---TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGF 366
                   D N D +V + E++A    T+   +           R    F+  D+  DG 
Sbjct: 62  WRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGI 121

Query: 367 ITPEELRM---HTGLKGS-IDPLLEEADIDKDGRISLSEFRRLLR 407
           +  EE +    +  L+ + +  +             L+ ++ L  
Sbjct: 122 VDLEEFQNYCKNFQLQCADVPAVYNVITDGGKVTFDLNRYKELYY 166

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A Length = 148

 Score = 88.4 bits (220), Expect = 3e-21
 Identities = 28/147 (19%), Positives = 55/147 (37%), Gaps = 12/147 (8%)

Query: 269 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQA-IDCNTDGLVDF 327
                +D F   D    G+I+ + +   L + + +      V +I+ A         +  
Sbjct: 2   ATRANKDIFTLFDKKGQGAIAKDSLGDYL-RAIGYNPTNQLVQDIINADSSLRDASSLTL 60

Query: 328 SEFVAATLHVHQLEEHDSEKWHLRSQ--AAFEKFDIDRDGFITPEELR---MHTGLKGS- 381
            +     L     +E D+           AF+ FD +  G ++  +LR      G K + 
Sbjct: 61  DQIT--GLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTD 118

Query: 382 --IDPLLEEADIDKDGRISLSEFRRLL 406
             +D LL+  ++D +G I   +F   +
Sbjct: 119 AEVDELLKGVEVDSNGEIDYKKFIEDV 145

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 93.5 bits (233), Expect = 3e-21
 Identities = 50/194 (25%), Positives = 83/194 (42%), Gaps = 38/194 (19%)

Query: 74  QMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 131
           QML+     ++H  G++HRD+KP N       ED  LK  DFGL+            V +
Sbjct: 136 QMLK--GLRYIHAAGIIHRDLKPGNLA---VNEDCELKILDFGLARQADSEMT--GYVVT 188

Query: 132 AYYVAPEVL--KRKSGPESDVWSIGVITYILLCGR-----------------------RP 166
            +Y APEV+    +     D+WS+G I   ++ G+                         
Sbjct: 189 RWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAE 248

Query: 167 FWDKTEDGIFKEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           F  + +    K  ++  P+  +K +     + S  A + ++K+LV D   R+TA +AL+H
Sbjct: 249 FVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAH 308

Query: 223 PWVREGGDASEIPI 236
           P+     D  + P 
Sbjct: 309 PYFESLHDTEDEPQ 322

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 94.5 bits (235), Expect = 3e-21
 Identities = 53/201 (26%), Positives = 84/201 (41%), Gaps = 42/201 (20%)

Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           QML      H  G++HRD+KP N +    K D +LK  DFGL+            V + Y
Sbjct: 172 QMLCGIKHLHSAGIIHRDLKPSNIV---VKSDCTLKILDFGLARTAGTSFMMTPYVVTRY 228

Query: 134 YVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPF--------WDK--------TEDGIF 176
           Y APEV L        D+WS+G I   ++  +  F        W+K          + + 
Sbjct: 229 YRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFMK 288

Query: 177 K------EVLRNKPDFRRKPWPSI----------------SNSAKDFVKKLLVKDPRARL 214
           K        + N+P +    +P +                ++ A+D + K+LV DP  R+
Sbjct: 289 KLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRI 348

Query: 215 TAAQALSHPWVREGGDASEIP 235
           +   AL HP++    D +E+ 
Sbjct: 349 SVDDALQHPYINVWYDPAEVE 369

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 145

 Score = 88.4 bits (220), Expect = 3e-21
 Identities = 31/147 (21%), Positives = 62/147 (42%), Gaps = 14/147 (9%)

Query: 268 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDF 327
                +++ F   D D +G +S+EE+  AL + L      + +  I   ++       D 
Sbjct: 2   ASADQIQECFQIFDKDNDGKVSIEELGSAL-RSLGKNPTNAELNTIKGQLNAKE---FDL 57

Query: 328 SEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS--- 381
           + F   T++   ++    +   +    AF   D + +G I   ELR   ++ G   +   
Sbjct: 58  ATFK--TVYRKPIKTPTEQSKEML--DAFRALDKEGNGTIQEAELRQLLLNLGDALTSSE 113

Query: 382 IDPLLEEADIDKDGRISLSEFRRLLRT 408
           ++ L++E  +  DG I+   F  +L T
Sbjct: 114 VEELMKEVSVSGDGAINYESFVDMLVT 140

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum} Length = 145

 Score = 55.6 bits (135), Expect = 1e-09
 Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%)

Query: 266 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 325
           +  +  ++ D F A+D + NG+I   E+RQ L   L   L  S V E+++ +  + DG +
Sbjct: 73  EQSK--EMLDAFRALDKEGNGTIQEAELRQLLLN-LGDALTSSEVEELMKEVSVSGDGAI 129

Query: 326 DFSEFV 331
           ++  FV
Sbjct: 130 NYESFV 135

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 93.2 bits (232), Expect = 4e-21
 Identities = 53/202 (26%), Positives = 82/202 (40%), Gaps = 42/202 (20%)

Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           QML      H  G++HRD+KP N +    K D +LK  DFGL+            V + Y
Sbjct: 135 QMLCGIKHLHSAGIIHRDLKPSNIV---VKSDCTLKILDFGLARTAGTSFMMTPYVVTRY 191

Query: 134 YVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPF--------WDK--------TEDGIF 176
           Y APEV L        D+WS+G I   ++ G   F        W+K          + + 
Sbjct: 192 YRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEFMK 251

Query: 177 K------EVLRNKPDFRRKPWPSI----------------SNSAKDFVKKLLVKDPRARL 214
           K        + N+P +    +  +                ++ A+D + K+LV D   R+
Sbjct: 252 KLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRI 311

Query: 215 TAAQALSHPWVREGGDASEIPI 236
           +  +AL HP++    D SE   
Sbjct: 312 SVDEALQHPYINVWYDPSEAEA 333

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 92.4 bits (230), Expect = 8e-21
 Identities = 49/192 (25%), Positives = 77/192 (40%), Gaps = 34/192 (17%)

Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           Q+LR     H   ++HRD+KP N       ED  LK  DFGL+       +    V + +
Sbjct: 140 QILRGLKYIHSADIIHRDLKPSNLA---VNEDCELKILDFGLARHTAD--EMTGYVATRW 194

Query: 134 YVAPEVL--KRKSGPESDVWSIGVITYILLCGR-----------------------RPFW 168
           Y APE++          D+WS+G I   LL GR                           
Sbjct: 195 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELL 254

Query: 169 DKTEDGIFKEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 224
            K      +  +++     +  +       +  A D ++K+LV D   R+TAAQAL+H +
Sbjct: 255 KKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAY 314

Query: 225 VREGGDASEIPI 236
             +  D  + P+
Sbjct: 315 FAQYHDPDDEPV 326

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 92.5 bits (230), Expect = 9e-21
 Identities = 49/193 (25%), Positives = 86/193 (44%), Gaps = 35/193 (18%)

Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAY 133
           Q+ R     H  G+ HRD+KP+N L  S  +D++LK  DFG +  + P +     + S +
Sbjct: 149 QLFRAVGFIHSLGICHRDIKPQNLLVNS--KDNTLKLCDFGSAKKLIPSEPSVAYICSRF 206

Query: 134 YVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDG------IFKEVL----- 180
           Y APE++    +  P  D+WSIG +   L+ G+  F    E        I + ++     
Sbjct: 207 YRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLF--SGETSIDQLVRIIQ-IMGTPTK 263

Query: 181 ------------RNKPDFRRKPW----PSISNS-AKDFVKKLLVKDPRARLTAAQALSHP 223
                          P  + K W    P  + S A D ++++L  +P  R+   +A++HP
Sbjct: 264 EQMIRMNPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHP 323

Query: 224 WVREGGDASEIPI 236
           +     ++ E  +
Sbjct: 324 FFDHLRNSYESEV 336

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score = 91.9 bits (229), Expect = 9e-21
 Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 30/203 (14%)

Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           L+ I+       T       +   L+     H H ++HRD+KP N L     E+  LK  
Sbjct: 98  LEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLL---DENGVLKLA 154

Query: 112 DFGLS-DFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW 168
           DFGL+  F  P + +   V + +Y APE+L   R  G   D+W++G I   LL       
Sbjct: 155 DFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLP 214

Query: 169 DKTE----DGIFKEV----------LRNKPDFRR-KPW---------PSISNSAKDFVKK 204
             ++      IF+ +          + + PD+   K +          +  +   D ++ 
Sbjct: 215 GDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQG 274

Query: 205 LLVKDPRARLTAAQALSHPWVRE 227
           L + +P AR+TA QAL   +   
Sbjct: 275 LFLFNPCARITATQALKMKYFSN 297

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 92.0 bits (229), Expect = 1e-20
 Identities = 40/218 (18%), Positives = 78/218 (35%), Gaps = 39/218 (17%)

Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLK 109
           L +++  +    + +     +  +L       LH  G+VHRD+ P N L     +++ + 
Sbjct: 120 LAQVIHDQRIVISPQHIQYFMYHILL--GLHVLHEAGVVHRDLHPGNIL---LADNNDIT 174

Query: 110 ATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF 167
             DF L+            V   +Y APE++   +      D+WS G +   +   R+  
Sbjct: 175 ICDFNLAREDTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMF-NRKAL 233

Query: 168 W--------------------DKTEDGIFKEVLRN-----KPDFRRKPW----PSISNSA 198
           +                     +          R+       +   + W    P+    A
Sbjct: 234 FRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVA 293

Query: 199 KDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 236
            D + K+L  +P+ R++  QAL HP+     D  ++  
Sbjct: 294 LDLIAKMLEFNPQRRISTEQALRHPYFESLFDPLDLTE 331

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C Length = 151

 Score = 86.9 bits (216), Expect = 1e-20
 Identities = 28/149 (18%), Positives = 56/149 (37%), Gaps = 11/149 (7%)

Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAI--DCNTD 322
            + ++L + ++ F+  D   +G I   +    + + L      + VL++L     D    
Sbjct: 4   FNKDQLEEFKEAFELFDRVGDGKILYSQCGDVM-RALGQNPTNAEVLKVLGNPKSDELKS 62

Query: 323 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLK 379
             VDF  F+     V +     + +        F  FD + +G +   ELR      G K
Sbjct: 63  RRVDFETFLPMLQAVAKNRGQGTYED-YL--EGFRVFDKEGNGKVMGAELRHVLTTLGEK 119

Query: 380 GSIDPLLE--EADIDKDGRISLSEFRRLL 406
            + + +        D +G I+   F + +
Sbjct: 120 MTEEEVETVLAGHEDSNGCINYEAFLKHI 148

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 91.7 bits (228), Expect = 1e-20
 Identities = 48/238 (20%), Positives = 83/238 (34%), Gaps = 55/238 (23%)

Query: 51  LLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH---GLVHRDMKPENFLFKSAK---E 104
           LL  I   +           + +Q+L      ++H   G++H D+KPEN L +       
Sbjct: 116 LLALIKKYEHRGIPLIYVKQISKQLLL--GLDYMHRRCGIIHTDIKPENVLMEIVDSPEN 173

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCG 163
              +K  D G + +    + + + + +  Y +PEV L    G  +D+WS   + + L+ G
Sbjct: 174 LIQIKIADLGNACWY--DEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITG 231

Query: 164 RRPFWDKTEDGIFK---------EVL------------------------RNKPDFRRKP 190
              F         K         E+L                        RN    +  P
Sbjct: 232 DFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWP 291

Query: 191 WPSISNSA-----------KDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPID 237
              +                DF+  +L  DPR R  A   ++HPW+++     EI + 
Sbjct: 292 LEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRVP 349

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 91.2 bits (227), Expect = 2e-20
 Identities = 51/198 (25%), Positives = 85/198 (42%), Gaps = 40/198 (20%)

Query: 74  QMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI--- 128
           Q+LR     ++H   ++HRD+KP N L         LK  DFGL+    P          
Sbjct: 136 QILR--GLKYIHSANVLHRDLKPSNLL---LNTTCDLKICDFGLARVADPDHDHTGFLTE 190

Query: 129 -VGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF--------WDK------- 170
            V + +Y APE++   +      D+WS+G I   +L  R  F         +        
Sbjct: 191 YVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGS 250

Query: 171 -TEDGIF-------KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQ 218
            +++ +        +  L + P   + PW    P+  + A D + K+L  +P  R+   Q
Sbjct: 251 PSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQ 310

Query: 219 ALSHPWVREGGDASEIPI 236
           AL+HP++ +  D S+ PI
Sbjct: 311 ALAHPYLEQYYDPSDEPI 328

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 91.7 bits (228), Expect = 2e-20
 Identities = 53/212 (25%), Positives = 74/212 (34%), Gaps = 59/212 (27%)

Query: 73  RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA 132
             +L+     H + ++H D+KPEN L K     S +K  DFG S +    ++    + S 
Sbjct: 207 HSILQCLDALHKNRIIHCDLKPENILLKQQG-RSGIKVIDFGSSCYE--HQRVYTYIQSR 263

Query: 133 YYVAPEV-LKRKSGPESDVWSIGVITYILLCGR--------------------------- 164
           +Y APEV L  + G   D+WS+G I   LL G                            
Sbjct: 264 FYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLL 323

Query: 165 --------------RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA------------ 198
                          P +          V+ N    RR        S             
Sbjct: 324 DASKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDP 383

Query: 199 --KDFVKKLLVKDPRARLTAAQALSHPWVREG 228
              DF+K+ L  DP  R+T  QAL HPW+R  
Sbjct: 384 LFLDFLKQCLEWDPAVRMTPGQALRHPWLRRR 415

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A Length = 190

 Score = 86.8 bits (215), Expect = 3e-20
 Identities = 35/177 (19%), Positives = 67/177 (37%), Gaps = 28/177 (15%)

Query: 251 SRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 308
           S+LK   +  L       ++E+      F  I    +G +     ++   +  P+     
Sbjct: 6   SKLKPEVVEELTRKTYFTEKEVQQWYKGF--IKDCPSGQLDAAGFQKIYKQFFPFGDPTK 63

Query: 309 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 368
               +    D N DG ++FSEF+ A     +    +  +W      AF+ +D+D DG+IT
Sbjct: 64  FATFVFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRW------AFKLYDLDNDGYIT 117

Query: 369 PEELRM------------------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 407
             E+                        +  +D +    D + DG+++L EF+   +
Sbjct: 118 RNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSK 174

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score = 90.6 bits (225), Expect = 5e-20
 Identities = 52/205 (25%), Positives = 74/205 (36%), Gaps = 50/205 (24%)

Query: 73  RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS-SLKATDFGLS-DFIKPGKKFQDIVG 130
            Q+L      H + ++HRD+KP N L      +   +K  D G +  F  P K   D+  
Sbjct: 135 YQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDP 194

Query: 131 SA---YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDG----------- 174
                +Y APE+L   R      D+W+IG I   LL     F  + ED            
Sbjct: 195 VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQL 254

Query: 175 --IFK-----------------EVLRNKPDFRRKPW-------------PSISNSAKDFV 202
             IF                  E      DFRR  +                 + A   +
Sbjct: 255 DRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLL 314

Query: 203 KKLLVKDPRARLTAAQALSHPWVRE 227
           +KLL  DP  R+T+ QA+  P+  E
Sbjct: 315 QKLLTMDPIKRITSEQAMQDPYFLE 339

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 89.6 bits (223), Expect = 5e-20
 Identities = 55/206 (26%), Positives = 80/206 (38%), Gaps = 48/206 (23%)

Query: 74  QMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 131
           Q LR  A   LH   ++HRD+KP N L      +  LK  DFGL+  I            
Sbjct: 120 QTLR--AVKVLHGSNVIHRDLKPSNLL---INSNCDLKVCDFGLARIIDESAADNSEPTG 174

Query: 132 A-----------YYVAPEVL--KRKSGPESDVWSIGVITYILLCGR-------------- 164
                       +Y APEV+    K     DVWS G I   L   R              
Sbjct: 175 QQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLL 234

Query: 165 ------RPFWDKTEDGIF----KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDP 210
                  P  D     I     +E +++ P +   P     P ++    D ++++LV DP
Sbjct: 235 IFGIIGTPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDP 294

Query: 211 RARLTAAQALSHPWVREGGDASEIPI 236
             R+TA +AL HP+++   D ++ P 
Sbjct: 295 AKRITAKEALEHPYLQTYHDPNDEPE 320

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis} Length = 309

 Score = 88.1 bits (219), Expect = 1e-19
 Identities = 43/180 (23%), Positives = 71/180 (39%), Gaps = 9/180 (5%)

Query: 44  RLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 103
           RL  G +L   +  ++        A  +VRQ+       H  G  HRD+KPEN L     
Sbjct: 114 RLINGVDLAAML--RRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILV---S 168

Query: 104 EDSSLKATDFGLSDFIKPGKKFQ--DIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYIL 160
            D      DFG++      K  Q  + VG+ YY+APE      +   +D++++  + Y  
Sbjct: 169 ADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYEC 228

Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           L G  P+       +   + +  P       P I  +    + + + K+P  R      L
Sbjct: 229 LTGSPPYQGDQLSVMGAHINQAIPRPSTVR-PGIPVAFDAVIARGMAKNPEDRYVTCGDL 287

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5 Length = 224

 Score = 85.8 bits (212), Expect = 2e-19
 Identities = 37/191 (19%), Positives = 68/191 (35%), Gaps = 26/191 (13%)

Query: 235 PIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMR 294
           P    + + +   +   R +        +     EL  L   F       +G ++ E  +
Sbjct: 18  PSKDKIEDELEMTMVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNEC--PSGVVNEETFK 75

Query: 295 QALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQA 354
           Q  A+  P     +    +  A D    G V F +FV A   + +   H+  +W      
Sbjct: 76  QIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHEKLRW------ 129

Query: 355 AFEKFDIDRDGFITPEELRM------------------HTGLKGSIDPLLEEADIDKDGR 396
            F  +DI++DG+I  EE+                        +  +D   ++ D +KDG 
Sbjct: 130 TFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGI 189

Query: 397 ISLSEFRRLLR 407
           ++L EF    +
Sbjct: 190 VTLDEFLESCQ 200

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score = 88.1 bits (219), Expect = 2e-19
 Identities = 54/228 (23%), Positives = 81/228 (35%), Gaps = 48/228 (21%)

Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           L  +L+    ++T  +   V++ +L      H + ++HRDMK  N L         LK  
Sbjct: 110 LAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGV---LKLA 166

Query: 112 DFGLSDFIKPGKKFQDIVGSAY--------YVAPEVL--KRKSGPESDVWSIGVITYILL 161
           DFGL+      K  Q    + Y        Y  PE+L  +R  GP  D+W  G I   + 
Sbjct: 167 DFGLARAFSLAKNSQP---NRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW 223

Query: 162 CGRRPFWDKTE----DGIFK-------------------EVLRNKPDFRRK-----PWPS 193
                    TE      I +                   E L      +RK         
Sbjct: 224 TRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYV 283

Query: 194 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVL 241
               A D + KLLV DP  R+ +  AL+H +         +P D+  +
Sbjct: 284 RDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWS----DPMPSDLKGM 327

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ... Length = 156

 Score = 83.4 bits (207), Expect = 2e-19
 Identities = 31/161 (19%), Positives = 63/161 (39%), Gaps = 18/161 (11%)

Query: 265 LDDEELADLRDQFDAIDVDKN--GSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 322
           L  +E+ DL+D F+  D      G++   ++     + L    +   V  +        +
Sbjct: 3   LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVC-RCLGINPRNEDVFAVGG-THKMGE 60

Query: 323 GLVDFSEFVAATLHVHQL-EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGL 378
             + F EF+    +   +  E  +         AF+ FD +  GFI+  ELR      G 
Sbjct: 61  KSLPFEEFL--PAYEGLMDCEQGTFA-DYM--EAFKTFDREGQGFISGAELRHVLTALGE 115

Query: 379 KGS---IDPLLEEADI--DKDGRISLSEFRRLLRTASISSR 414
           + S   +D +++  D+  D +G +   +F + +       +
Sbjct: 116 RLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAGPYPDK 156

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C* Length = 149

 Score = 83.0 bits (206), Expect = 3e-19
 Identities = 23/150 (15%), Positives = 53/150 (35%), Gaps = 13/150 (8%)

Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT--D 322
                  D ++ F   D   +  I+  ++     + L      + + +IL          
Sbjct: 2   FSKAAADDFKEAFLLFDRTGDAKITASQVGDIA-RALGQNPTNAEINKILGNPSKEEMNA 60

Query: 323 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLK 379
             + F EF+         ++  + +  +        FD + +G +   ELR      G K
Sbjct: 61  AAITFEEFLPMLQAAANNKDQGTFEDFVE---GLRVFDKEGNGTVMGAELRHVLATLGEK 117

Query: 380 GS---IDPLLEEADIDKDGRISLSEFRRLL 406
            +   ++ L++  + D +G I+   F + +
Sbjct: 118 MTEEEVEELMKGQE-DSNGCINYEAFVKHI 146

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* Length = 360

 Score = 86.8 bits (215), Expect = 5e-19
 Identities = 54/253 (21%), Positives = 91/253 (35%), Gaps = 69/253 (27%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG---LVHRDMKPENFLFKS 101
             +GG L    + KK  R  E+    V   +++     +L     ++HRD+KP N L  S
Sbjct: 112 HMDGGSLDQ--VLKKAGRIPEQILGKVSIAVIK--GLTYLREKHKIMHRDVKPSNILVNS 167

Query: 102 AKEDSSLKATDFGLSDFIKPGKKFQDI----VGSAYYVAPEVLKRKS-GPESDVWSIGVI 156
             E   +K  DFG+S     G+    +    VG+  Y++PE L+      +SD+WS+G+ 
Sbjct: 168 RGE---IKLCDFGVS-----GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLS 219

Query: 157 TYILLCGRRPF--------------------WDKTEDGIFKEVLRNKPDFRRKPWPSI-- 194
              +  GR P                      +            NK     +P  +I  
Sbjct: 220 LVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFE 279

Query: 195 ------------------SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 236
                             S   +DFV K L+K+P  R    Q + H +++    +    +
Sbjct: 280 LLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR---SDAEEV 336

Query: 237 DISVLNNMRQFVK 249
           D         ++ 
Sbjct: 337 D------FAGWLC 343

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score = 87.0 bits (216), Expect = 5e-19
 Identities = 47/189 (24%), Positives = 76/189 (40%), Gaps = 40/189 (21%)

Query: 74  QMLRVAAECHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 131
           Q++R     HL    + HRD+KP N L    + D +LK  DFG +  + P +     + S
Sbjct: 137 QLIRSIGCLHLPSVNVCHRDIKPHNVLVN--EADGTLKLCDFGSAKKLSPSEPNVAYICS 194

Query: 132 AYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDG------IFKEVL--- 180
            YY APE++   +      D+WS+G I   ++ G   F  + ++       I + VL   
Sbjct: 195 RYYRAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIF--RGDNSAGQLHEIVR-VLGCP 251

Query: 181 --------------RNKPDFRRKPW--------PSISNSAKDFVKKLLVKDPRARLTAAQ 218
                          +  + +  PW           +  A D +  LL   P  R+   +
Sbjct: 252 SREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEERMKPYE 311

Query: 219 ALSHPWVRE 227
           AL HP+  E
Sbjct: 312 ALCHPYFDE 320

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 Length = 109

 Score = 81.1 bits (201), Expect = 5e-19
 Identities = 27/108 (25%), Positives = 41/108 (37%), Gaps = 18/108 (16%)

Query: 312 EILQAI-DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 370
           +I +AI      G  D+  F        + +        ++    FE  D D+ GFI  E
Sbjct: 10  DINKAISAFKDPGTFDYKRFFHLVGLKGKTDAQ------VK--EVFEILDKDQSGFIEEE 61

Query: 371 ELR------MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLRTA 409
           EL+         G   +      LL   D D DG+I   EF +++  A
Sbjct: 62  ELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQA 109

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4 Length = 109

 Score = 58.7 bits (143), Expect = 4e-11
 Identities = 16/77 (20%), Positives = 32/77 (41%), Gaps = 4/77 (5%)

Query: 258 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW--KLKESRVLEILQ 315
              +      +    +++ F+ +D D++G I  EE++  L         L ++    +L 
Sbjct: 30  FHLVGLKGKTDA--QVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLA 87

Query: 316 AIDCNTDGLVDFSEFVA 332
           A D + DG +   EF  
Sbjct: 88  AGDSDHDGKIGADEFAK 104

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B* Length = 389

 Score = 86.9 bits (215), Expect = 7e-19
 Identities = 47/238 (19%), Positives = 83/238 (34%), Gaps = 62/238 (26%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--GLVHRDMKPENFLFKSA 102
               G   D I         E   A +++ +L+  A  ++H  G VHR +K  + L    
Sbjct: 107 FMAYGSAKDLICTHFMDGMNELAIAYILQGVLK--ALDYIHHMGYVHRSVKASHILI--- 161

Query: 103 KEDSSLKATDFGLS-DFIKPGKK-------FQDIVGSAYYVAPEVLKRKS---GPESDVW 151
             D  +  +    +   I  G++        +  V    +++PEVL++       +SD++
Sbjct: 162 SVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIY 221

Query: 152 SIGVITYI-LLCGRRPFWD------------------------------------KTEDG 174
           S+G IT   L  G  PF D                                        G
Sbjct: 222 SVG-ITACELANGHVPFKDMPATQMLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSG 280

Query: 175 IFKEVLRNKPDFRRKPWPSI------SNSAKDFVKKLLVKDPRARLTAAQALSHPWVR 226
           +   +  + P       PS       S     FV++ L ++P AR +A+  L+H + +
Sbjct: 281 LSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSFFK 338

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A Length = 108

 Score = 80.7 bits (200), Expect = 7e-19
 Identities = 25/112 (22%), Positives = 42/112 (37%), Gaps = 19/112 (16%)

Query: 305 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRD 364
           LK++ V   L A            EF A      +  +       ++   AF   D D+ 
Sbjct: 6   LKDADVAAALAACS--AADSFKHKEFFAKVGLASKSLDD------VK--KAFYVIDQDKS 55

Query: 365 GFITPEELRM------HTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 407
           GFI  +EL++       +    +       L + D D DG I + EF  +++
Sbjct: 56  GFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 107

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A Length = 108

 Score = 58.3 bits (142), Expect = 6e-11
 Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 2/73 (2%)

Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW--KLKESRVLEILQAIDC 319
              L  + L D++  F  ID DK+G I  +E++  L    P    L ++     L   D 
Sbjct: 32  KVGLASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDK 91

Query: 320 NTDGLVDFSEFVA 332
           + DG++   EF A
Sbjct: 92  DGDGMIGVDEFAA 104

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 Length = 140

 Score = 80.2 bits (199), Expect = 2e-18
 Identities = 28/145 (19%), Positives = 51/145 (35%), Gaps = 15/145 (10%)

Query: 268 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDF 327
            + +  +  F   D    G I    +   L +        + + EI    +      VD 
Sbjct: 2   TDDSPYKQAFSLFDRHGTGRIPKTSIGDLL-RACGQNPTLAEITEI----ESTLPAEVDM 56

Query: 328 SEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS--- 381
            +F+      +  +     +        F+ FD D  G I   ELR      G K S   
Sbjct: 57  EQFLQVLNRPNGFDMPGDPEE-FV--KGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEE 113

Query: 382 IDPLLEEADIDKDGRISLSEFRRLL 406
           +D LL+   +  DG ++  +F +++
Sbjct: 114 MDELLKGVPVK-DGMVNYHDFVQMI 137

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5 Length = 140

 Score = 50.2 bits (121), Expect = 9e-08
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 2/66 (3%)

Query: 266 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 325
              +  +    F   D D  G I + E+R  L   L  KL    + E+L+ +    DG+V
Sbjct: 71  MPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTS-LGEKLSNEEMDELLKGVPVK-DGMV 128

Query: 326 DFSEFV 331
           ++ +FV
Sbjct: 129 NYHDFV 134

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A Length = 207

 Score = 82.3 bits (203), Expect = 2e-18
 Identities = 32/179 (17%), Positives = 62/179 (34%), Gaps = 30/179 (16%)

Query: 251 SRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 308
             L +  L  L       +EEL      F  +     G I+ ++ +   AK  P    ++
Sbjct: 14  GALSKEILEELQLNTKFSEEELCSWYQSF--LKDCPTGRITQQQFQSIYAKFFPDTDPKA 71

Query: 309 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 368
               + ++ D N DG +DF E+V A       + +   +W      AF  +D+D +G I+
Sbjct: 72  YAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEW------AFSLYDVDGNGTIS 125

Query: 369 PEELR--------------------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 407
             E+                          +   + + +    + D +++  EF     
Sbjct: 126 KNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEFIEGTL 184

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A Length = 146

 Score = 79.2 bits (196), Expect = 6e-18
 Identities = 18/148 (12%), Positives = 46/148 (31%), Gaps = 18/148 (12%)

Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
             +E++ +   +    +    G IS++       K L          +I +         
Sbjct: 9   QLEEKVDESDVRIYFNEKSSGGKISIDNASYNARK-LGLAPSSIDEKKIKELY----GDN 63

Query: 325 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS 381
           + + +++        + + D+ +  L     F  FD +  G++T  +++      G   +
Sbjct: 64  LTYEQYL--EYLSICVHDKDNVEE-LI--KMFAHFDNNCTGYLTKSQMKNILTTWGDALT 118

Query: 382 ---IDPLLEEADIDKDGRISLSEFRRLL 406
                  L       +  I    F   +
Sbjct: 119 DQEAIDALNAF--SSEDNIDYKLFCEDI 144

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A Length = 146

 Score = 48.0 bits (115), Expect = 5e-07
 Identities = 14/71 (19%), Positives = 28/71 (39%), Gaps = 5/71 (7%)

Query: 266 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 325
           D+ E  +L   F   D +  G ++  +M+  L       L +   ++ L A    ++  +
Sbjct: 81  DNVE--ELIKMFAHFDNNCTGYLTKSQMKNILTT-WGDALTDQEAIDALNAFS--SEDNI 135

Query: 326 DFSEFVAATLH 336
           D+  F    L 
Sbjct: 136 DYKLFCEDILQ 146

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A Length = 110

 Score = 77.6 bits (192), Expect = 1e-17
 Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 19/118 (16%)

Query: 301 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFD 360
               LK   + + L A+    +G  +  +F A  + +  +  +D     ++    F+  D
Sbjct: 3   AKDLLKADDIKKALDAVK--AEGSFNHKKFFA-LVGLKAMSAND-----VK--KVFKAID 52

Query: 361 IDRDGFITPEELRM------HTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLRTA 409
            D  GFI  EEL+         G   +       L+ AD D DG+I + EF  L+  A
Sbjct: 53  ADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHEA 110

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A Length = 110

 Score = 57.6 bits (140), Expect = 1e-10
 Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 4/77 (5%)

Query: 258 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW--KLKESRVLEILQ 315
              +          D++  F AID D +G I  EE++  L         L ++     L+
Sbjct: 31  FALVGLKAMSAN--DVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLK 88

Query: 316 AIDCNTDGLVDFSEFVA 332
           A D + DG +   EF  
Sbjct: 89  AADKDGDGKIGIDEFET 105

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A Length = 190

 Score = 79.9 bits (197), Expect = 1e-17
 Identities = 34/179 (18%), Positives = 67/179 (37%), Gaps = 28/179 (15%)

Query: 249 KYSRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLK 306
           K S+L +  L  L  +   D  E+      F       +G ++ E+  +   +  P+   
Sbjct: 4   KTSKLSKDDLTCLKQSTYFDRREIQQWHKGFLRDC--PSGQLAREDFVKIYKQFFPFGSP 61

Query: 307 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGF 366
           E     +    D + +G + F EF+       +    +      +   AFE +D++ DG+
Sbjct: 62  EDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEE------KLSWAFELYDLNHDGY 115

Query: 367 ITPEELRM------------------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 407
           IT +E+                        +  +  + +  D ++DG I+L EFR   +
Sbjct: 116 ITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSK 174

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} PDB: 3c4c_A* 3c4d_A* 3idp_A* 3ii5_A* 3d4q_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 2fb8_A* 4dbn_A* 1uwj_A* 1uwh_A* 3q96_A* Length = 289

 Score = 81.6 bits (202), Expect = 1e-17
 Identities = 41/188 (21%), Positives = 82/188 (43%), Gaps = 33/188 (17%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC-------HLHGLVHRDMKPENF 97
            CEG  L    L   ++++         ++++ +A +        H   ++HRD+K  N 
Sbjct: 100 WCEGSSLYH-HLHASETKFEM-------KKLIDIARQTARGMDYLHAKSIIHRDLKSNNI 151

Query: 98  LFKSAKEDSSLKATDFGLS---DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPE----SDV 150
                 ED+++K  DFGL+          +F+ + GS  ++APEV++ +        SDV
Sbjct: 152 FLH---EDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDV 208

Query: 151 WSIGVITYILLCGRRPFWDKT-EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVK- 208
           ++ G++ Y L+ G+ P+ +    D I + V R            + ++    +K+L+ + 
Sbjct: 209 YAFGIVLYELMTGQLPYSNINNRDQIIEMVGRG---SLSPDLSKVRSNCPKRMKRLMAEC 265

Query: 209 ---DPRAR 213
                  R
Sbjct: 266 LKKKRDER 273

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E Length = 183

 Score = 79.1 bits (195), Expect = 1e-17
 Identities = 35/161 (21%), Positives = 60/161 (37%), Gaps = 26/161 (16%)

Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
               EL  L   F       +G ++ E  +Q  A+  P     +    +  A D    G 
Sbjct: 15  FTKRELQVLYRGFKNEX--PSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGS 72

Query: 325 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---------- 374
           V F +FV A   + +   H+  +W       F  +DI++DG+I  EE+            
Sbjct: 73  VKFEDFVTALSILLRGTVHEKLRW------TFNLYDINKDGYINKEEMMDIVKAIYDMMG 126

Query: 375 --------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 407
                       +  +D   ++ D +KDG ++L EF    +
Sbjct: 127 KYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQ 167

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens} Length = 307

 Score = 81.6 bits (202), Expect = 2e-17
 Identities = 49/182 (26%), Positives = 77/182 (42%), Gaps = 26/182 (14%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA-AECHLH-----GLVHRDMKPENFL 98
             EGG L   +L   +       AA  +   L+ +    +LH      L+HRD+KP N L
Sbjct: 80  YAEGGSL-YNVLHGAEPLP-YYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLL 137

Query: 99  FKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPE-SDVWSIGVIT 157
                  + LK  DFG +  I+      +  GSA ++APEV +  +  E  DV+S G+I 
Sbjct: 138 L--VAGGTVLKICDFGTACDIQ--THMTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIIL 193

Query: 158 YILLCGRRPFWD--KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLV----KDPR 211
           + ++  R+PF +       I   V       R    P +  +    ++ L+     KDP 
Sbjct: 194 WEVITRRKPFDEIGGPAFRIMWAVHNGT---R----PPLIKNLPKPIESLMTRCWSKDPS 246

Query: 212 AR 213
            R
Sbjct: 247 QR 248

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 82.5 bits (204), Expect = 2e-17
 Identities = 45/218 (20%), Positives = 77/218 (35%), Gaps = 66/218 (30%)

Query: 73  RQMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 130
           +QM             ++H D+KPEN L  + K  S++K  DFG S  +  G++    + 
Sbjct: 164 QQMCTALLFLATPELSIIHCDLKPENILLCNPK-RSAIKIVDFGSSCQL--GQRIYQYIQ 220

Query: 131 SAYYVAPEV-LKRKSGPESDVWSIGVITYILLCG-------------------------- 163
           S +Y +PEV L        D+WS+G I   +  G                          
Sbjct: 221 SRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAH 280

Query: 164 -------RRPFWDKTEDGIF--KEVLRNKPDFRRKPWPSISNSAK--------------- 199
                   R F++K  DG +  K+    K +++      + N                  
Sbjct: 281 ILDQAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESG 340

Query: 200 ----------DFVKKLLVKDPRARLTAAQALSHPWVRE 227
                     D + ++L  DP+ R+    AL H + ++
Sbjct: 341 HTVADYLKFKDLILRMLDYDPKTRIQPYYALQHSFFKK 378

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 Length = 109

 Score = 76.5 bits (189), Expect = 2e-17
 Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 19/113 (16%)

Query: 304 KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDR 363
            L ++ V   L+A +       ++  F A      +  +   +        AF   D D+
Sbjct: 6   ILADADVAAALKACE--AADSFNYKAFFAKVGLTAKSADDIKK--------AFFVIDQDK 55

Query: 364 DGFITPEELR--MHTGLKGS-------IDPLLEEADIDKDGRISLSEFRRLLR 407
            GFI  +EL+  +     G+           L+  D D DG I + E+  L++
Sbjct: 56  SGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDEWAALVK 108

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4 Length = 109

 Score = 58.4 bits (142), Expect = 5e-11
 Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 2/73 (2%)

Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK--DLPWKLKESRVLEILQAIDC 319
              L  +   D++  F  ID DK+G I  +E++  L         L ++     L+A D 
Sbjct: 33  KVGLTAKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDS 92

Query: 320 NTDGLVDFSEFVA 332
           + DG +   E+ A
Sbjct: 93  DGDGAIGVDEWAA 105

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} PDB: 2kqy_A Length = 109

 Score = 75.4 bits (186), Expect = 6e-17
 Identities = 22/106 (20%), Positives = 38/106 (35%), Gaps = 18/106 (16%)

Query: 312 EILQAI-DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 370
           +I  A+  C      ++  F +      +  +          +  F   D D+ GFI  E
Sbjct: 11  DIESALSSCQAADSFNYKSFFSTVGLSSKTPDQ--------IKKVFGILDQDKSGFIEEE 62

Query: 371 ELR---MHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLR 407
           EL+    +                L   D D DG+I + EF+ L++
Sbjct: 63  ELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK 108

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} PDB: 2kqy_A Length = 109

 Score = 60.4 bits (147), Expect = 1e-11
 Identities = 18/73 (24%), Positives = 29/73 (39%), Gaps = 2/73 (2%)

Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK--DLPWKLKESRVLEILQAIDC 319
              L  +    ++  F  +D DK+G I  EE++  L         L  +     L A D 
Sbjct: 33  TVGLSSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDT 92

Query: 320 NTDGLVDFSEFVA 332
           + DG +   EF +
Sbjct: 93  DGDGKIGVEEFQS 105

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 80.3 bits (198), Expect = 2e-16
 Identities = 48/251 (19%), Positives = 75/251 (29%), Gaps = 91/251 (36%)

Query: 74  QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSA- 132
            +L      H  G++HRD+KP N L     +D S+K  DFGL+  +   +     +  + 
Sbjct: 164 NLLVGVKYVHSAGILHRDLKPANCL---VNQDCSVKVCDFGLARTVDYPENGNSQLPISP 220

Query: 133 ---------------------------YYVAPEVL--KRKSGPESDVWSIGVI------- 156
                                      +Y APE++  +       DVWSIG I       
Sbjct: 221 REDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280

Query: 157 ---TYILLCGRRPF--------------------------------------------WD 169
                     R P                                              +
Sbjct: 281 IKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIE 340

Query: 170 KTEDGIFKEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
             E    K  +R  P           P+ S  A   +K++LV +P  R+T  + L+HP+ 
Sbjct: 341 ALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFF 400

Query: 226 REGGDASEIPI 236
           +E   A     
Sbjct: 401 KEVRIAEVETN 411

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A* Length = 287

 Score = 78.5 bits (194), Expect = 2e-16
 Identities = 41/192 (21%), Positives = 76/192 (39%), Gaps = 24/192 (12%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA-AECHLHG----LVHRDMKPENFLF 99
               G+L    L  K          V +R ML +A    ++      +VHRD++  N   
Sbjct: 102 FVPCGDLYH-RLLDKAHPIKWS---VKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFL 157

Query: 100 KSAKEDS--SLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGP---ESDVWSIG 154
           +S  E++    K  DFGLS           ++G+  ++APE +  +      ++D +S  
Sbjct: 158 QSLDENAPVCAKVADFGLSQQSVHSVS--GLLGNFQWMAPETIGAEEESYTEKADTYSFA 215

Query: 155 VITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVK----DP 210
           +I Y +L G  PF + +   I    +  +   R    P+I       ++ ++      DP
Sbjct: 216 MILYTILTGEGPFDEYSYGKIKFINMIREEGLR----PTIPEDCPPRLRNVIELCWSGDP 271

Query: 211 RARLTAAQALSH 222
           + R   +  +  
Sbjct: 272 KKRPHFSYIVKE 283

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Length = 91

 Score = 73.2 bits (180), Expect = 2e-16
 Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 3/80 (3%)

Query: 253 LKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLE 312
             +  L    +  D EELA LR  F A D +++G +  EE R    + L   ++ +    
Sbjct: 9   SGRENLYFQGADGDGEELARLRSVFAACDANRSGRLEREEFRALCTE-LR--VRPADAEA 65

Query: 313 ILQAIDCNTDGLVDFSEFVA 332
           + Q +D + DG + F EF  
Sbjct: 66  VFQRLDADRDGAITFQEFAR 85

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens} Length = 91

 Score = 60.1 bits (146), Expect = 1e-11
 Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 6/80 (7%)

Query: 334 TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---HTGLKGS-IDPLLEEA 389
            L+    +    E   LR  + F   D +R G +  EE R       ++ +  + + +  
Sbjct: 13  NLYFQGADGDGEELARLR--SVFAACDANRSGRLEREEFRALCTELRVRPADAEAVFQRL 70

Query: 390 DIDKDGRISLSEFRRLLRTA 409
           D D+DG I+  EF R    +
Sbjct: 71  DADRDGAITFQEFARGFLGS 90

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens} Length = 319

 Score = 78.9 bits (195), Expect = 2e-16
 Identities = 37/193 (19%), Positives = 71/193 (36%), Gaps = 39/193 (20%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC-------HLHGLVHRDMKPENF 97
           LC+G  L   ++                 +  ++A E        H  G++H+D+K +N 
Sbjct: 110 LCKGRTLYS-VVRDAKIVLDV-------NKTRQIAQEIVKGMGYLHAKGILHKDLKSKNV 161

Query: 98  LFKSAKEDSSLKATDFGLS------DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPE---- 147
            +    ++  +  TDFGL          +   K +   G   ++APE++++ S       
Sbjct: 162 FY----DNGKVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDK 217

Query: 148 ------SDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN-KPDFRRKPWPSISNSAKD 200
                 SDV+++G I Y L     PF  +  + I  ++    KP+  +           D
Sbjct: 218 LPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTGMKPNLSQIGMGK---EISD 274

Query: 201 FVKKLLVKDPRAR 213
            +      +   R
Sbjct: 275 ILLFCWAFEQEER 287

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A Length = 286

 Score = 77.9 bits (192), Expect = 3e-16
 Identities = 24/179 (13%), Positives = 41/179 (22%), Gaps = 35/179 (19%)

Query: 44  RLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 103
               GG L +      D+  +   A   ++ +   A   H  G+      P         
Sbjct: 111 EWIRGGSLQEVA----DTSPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRV---S 163

Query: 104 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCG 163
            D  +                          +          P+ D+  IG   Y LL  
Sbjct: 164 IDGDVVLAYPA-------------------TMPDA------NPQDDIRGIGASLYALLVN 198

Query: 164 RRPFWDKTEDGIFKEVLRNKPDFRRKPW---PSISNSAKDFVKKLLVKDPRARLTAAQA 219
           R P  +           R+      +P      I         + +  D   R  +   
Sbjct: 199 RWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDIPFQISAVAARSVQGDGGIRSASTLL 257

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A Length = 173

 Score = 75.1 bits (185), Expect = 3e-16
 Identities = 28/148 (18%), Positives = 54/148 (36%), Gaps = 27/148 (18%)

Query: 268 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR--------VLEILQAIDC 319
           EE+   R  F  +    +  +S  E+   L K +  +  + +           ++  +D 
Sbjct: 1   EEVRQFRRLFAQLA-GDDMEVSATELMNILNKVV-TRHPDLKTDGFGIDTCRSMVAVMDS 58

Query: 320 NTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-----M 374
           +T G + F EF     ++ +             QA +++FD+DR G I   EL       
Sbjct: 59  DTTGKLGFEEFKYLWNNIKKW------------QAIYKQFDVDRSGTIGSSELPGAFEAA 106

Query: 375 HTGLKGSIDPLLEEADIDKDGRISLSEF 402
              L   +  ++     D+ G +    F
Sbjct: 107 GFHLNEHLYSMIIRRYSDEGGNMDFDNF 134

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A Length = 173

 Score = 64.7 bits (158), Expect = 1e-12
 Identities = 26/148 (17%), Positives = 51/148 (34%), Gaps = 32/148 (21%)

Query: 239 SVLNNMRQFVKYSRLKQFALRALAS-----------TLDDEE-------LADLRDQFDAI 280
           ++LN +       +   F +    S            L  EE       +   +  +   
Sbjct: 27  NILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNIKKWQAIYKQF 86

Query: 281 DVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL 340
           DVD++G+I   E+  A  +   + L E  +  ++     +  G +DF  F++  + +  +
Sbjct: 87  DVDRSGTIGSSELPGAF-EAAGFHLNE-HLYSMIIRRYSDEGGNMDFDNFISCLVRLDAM 144

Query: 341 EEHDSEKWHLRSQAAFEKFDIDRDGFIT 368
                         AF+  D D  G I 
Sbjct: 145 FR------------AFKSLDKDGTGQIQ 160

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 79.0 bits (195), Expect = 4e-16
 Identities = 47/245 (19%), Positives = 77/245 (31%), Gaps = 87/245 (35%)

Query: 74  QMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 131
            +L    E  +H  G++HRD+KP N L     +D S+K  DFGL+  I   K    +   
Sbjct: 137 NLLL--GENFIHESGIIHRDLKPANCL---LNQDCSVKVCDFGLARTINSEKDTNIVNDL 191

Query: 132 A-----------------------YYVAPEVL--KRKSGPESDVWSIGVI---------- 156
                                   +Y APE++  +       D+WS G I          
Sbjct: 192 EENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQS 251

Query: 157 TYILLCGRRPF----------------WDKTEDG------IF------------------ 176
                  R P                     +        IF                  
Sbjct: 252 HINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNINKPE 311

Query: 177 -KEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA 231
             + ++  P  +        PSIS+   + ++ +L  +P  R+T  QAL HP++++    
Sbjct: 312 VIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRKK 371

Query: 232 SEIPI 236
                
Sbjct: 372 KLENF 376

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A* Length = 309

 Score = 77.3 bits (191), Expect = 5e-16
 Identities = 44/180 (24%), Positives = 74/180 (41%), Gaps = 22/180 (12%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA-AECHLHG----LVHRDMKPENFLF 99
               G L   +L K  +R  + D    +     VA    +LH     +VHR++K  N L 
Sbjct: 115 YLSRGSLYR-LLHKSGARE-QLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLV 172

Query: 100 KSAKEDSSLKATDFGLSDFI-KPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVIT 157
               +  ++K  DFGLS          +   G+  ++APEVL+ + S  +SDV+S GVI 
Sbjct: 173 D---KKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVIL 229

Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVK----DPRAR 213
           + L   ++P+ +     +   V       +R     I  +    V  ++      +P  R
Sbjct: 230 WELATLQQPWGNLNPAQVVAAVGFKC---KR---LEIPRNLNPQVAAIIEGCWTNEPWKR 283

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 78.1 bits (193), Expect = 5e-16
 Identities = 47/212 (22%), Positives = 74/212 (34%), Gaps = 59/212 (27%)

Query: 73  RQMLRVAAECHLHGLVHRDMKPENFLFKSAK----------------EDSSLKATDFGLS 116
            Q+       H + L H D+KPEN LF +++                +++S++  DFG +
Sbjct: 130 YQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSA 189

Query: 117 DFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGR----------- 164
            F    +    IV + +Y  PEV L+       DVWSIG I +    G            
Sbjct: 190 TFD--HEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREH 247

Query: 165 ----------------------------RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN 196
                                          WD+            KP        S+ +
Sbjct: 248 LVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEH 307

Query: 197 SA-KDFVKKLLVKDPRARLTAAQALSHPWVRE 227
               D ++++L  DP  R+T A+AL HP+   
Sbjct: 308 VQLFDLMRRMLEFDPAQRITLAEALLHPFFAG 339

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} Length = 135

 Score = 73.1 bits (180), Expect = 6e-16
 Identities = 21/111 (18%), Positives = 40/111 (36%), Gaps = 12/111 (10%)

Query: 307 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGF 366
           E     +L      T     + + +   +   +++  +     L     F          
Sbjct: 2   EPTEKSMLLETTSTTKMETKYEDML--PVMAEKMDVEEFVS-ELC--KGFSLLADPERHL 56

Query: 367 ITPEELRMHTGLKGS-------IDPLLEEADIDKDGRISLSEFRRLLRTAS 410
           IT E LR ++G+ G           ++ E D+D DG ++ +EF  L+   S
Sbjct: 57  ITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGALNQTEFCVLMVRLS 107

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana} Length = 135

 Score = 50.8 bits (122), Expect = 4e-08
 Identities = 14/83 (16%), Positives = 35/83 (42%)

Query: 266 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 325
            +E +++L   F  +   +   I+ E +R+         + +     +++  D + DG +
Sbjct: 35  VEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQGMVREGDLDGDGAL 94

Query: 326 DFSEFVAATLHVHQLEEHDSEKW 348
           + +EF    + +      D+E W
Sbjct: 95  NQTEFCVLMVRLSPEMMEDAETW 117

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 75.4 bits (186), Expect = 3e-15
 Identities = 49/213 (23%), Positives = 74/213 (34%), Gaps = 63/213 (29%)

Query: 73  RQMLRVAAECHLHGLVHRDMKPENFLFKSAK----------------EDSSLKATDFGLS 116
            Q+ +     H + L H D+KPEN LF  +                  +  +K  DFG +
Sbjct: 125 YQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGSA 184

Query: 117 DFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPFWDKTED-- 173
            +    +    +V + +Y APEV L        DVWSIG I      G   F   T D  
Sbjct: 185 TYD--DEHHSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVF--PTHDSK 240

Query: 174 ----------GIF-KEVLRNKP-----DFRRKPWPSISNSAK------------------ 199
                     G   K +++           R  W   S++ +                  
Sbjct: 241 EHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDV 300

Query: 200 ------DFVKKLLVKDPRARLTAAQALSHPWVR 226
                 D ++K+L  DP  R+T  +AL HP+  
Sbjct: 301 EHERLFDLIQKMLEYDPAKRITLREALKHPFFD 333

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A Length = 108

 Score = 70.0 bits (172), Expect = 4e-15
 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 2/73 (2%)

Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK--DLPWKLKESRVLEILQAIDC 319
            S L     + ++D F  ID D++G +  +E++  L K      +L ES    ++ A D 
Sbjct: 32  TSGLSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADN 91

Query: 320 NTDGLVDFSEFVA 332
           + DG +   EF  
Sbjct: 92  DGDGKIGADEFQE 104

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A Length = 108

 Score = 63.8 bits (156), Expect = 6e-13
 Identities = 20/107 (18%), Positives = 40/107 (37%), Gaps = 18/107 (16%)

Query: 312 EILQAID-CNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 370
           +I  A+  C      +  +F   +          S+    + +  F   D D+ G++  +
Sbjct: 10  DIAAALQECQDPDTFEPQKFFQTS--------GLSKMSASQVKDIFRFIDNDQSGYLDGD 61

Query: 371 ELRM---HTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT 408
           EL+                    L++ AD D DG+I   EF+ ++ +
Sbjct: 62  ELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVHS 108

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 75.1 bits (185), Expect = 5e-15
 Identities = 38/218 (17%), Positives = 59/218 (27%), Gaps = 67/218 (30%)

Query: 73  RQMLRVAAECHLHGLVHRDMKPENFLFKSAK----------------------EDSSLKA 110
            ++L+         L H D+KPEN L                           + + +K 
Sbjct: 144 IEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTGIKL 203

Query: 111 TDFGLSDFIKPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCG------ 163
            DFG + F         I+ +  Y APEV L       SD+WS G +   L  G      
Sbjct: 204 IDFGCATFK--SDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRT 261

Query: 164 ----------------------------RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI- 194
                                           +   ++               K      
Sbjct: 262 HEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCL 321

Query: 195 -------SNSAKDFVKKLLVKDPRARLTAAQALSHPWV 225
                       DF+  +L  DP  R + A+ L H ++
Sbjct: 322 PLYKIIKHELFCDFLYSILQIDPTLRPSPAELLKHKFL 359

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} Length = 271

 Score = 72.3 bits (178), Expect = 2e-14
 Identities = 49/185 (26%), Positives = 76/185 (41%), Gaps = 29/185 (15%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVA-AECHLHG-----LVHRDMKPENFL 98
              GG L   +L+ K          ++V   +++A    +LH      ++HRD+K  N L
Sbjct: 87  FARGGPLNR-VLSGK-----RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNIL 140

Query: 99  -----FKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPE-SDVWS 152
                      +  LK TDFGL+       K     G+  ++APEV++     + SDVWS
Sbjct: 141 ILQKVENGDLSNKILKITDFGLAREWHRTTK-MSAAGAYAWMAPEVIRASMFSKGSDVWS 199

Query: 153 IGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVK---- 208
            GV+ + LL G  PF       +   V  NK          I ++  +   KL+      
Sbjct: 200 YGVLLWELLTGEVPFRGIDGLAVAYGVAMNK---LA---LPIPSTCPEPFAKLMEDCWNP 253

Query: 209 DPRAR 213
           DP +R
Sbjct: 254 DPHSR 258

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167

 Score = 69.7 bits (171), Expect = 2e-14
 Identities = 23/139 (16%), Positives = 51/139 (36%), Gaps = 23/139 (16%)

Query: 273 LRDQFDAIDVDKNGSISLEEMRQALAKDLPW----KLKESRVLEILQAIDCNTDGLVDFS 328
           L   F ++   ++G I  +E+++ L +                 ++  +D +  G + F+
Sbjct: 4   LYGYFASVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFN 62

Query: 329 EFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---HTGLKGSIDPL 385
           EF      ++              +  F  FD DR G + P+EL+      G + +    
Sbjct: 63  EFKELWAVLNGW------------RQHFISFDSDRSGTVDPQELQKALTTMGFRLN-PQT 109

Query: 386 LEE--ADIDKDGRISLSEF 402
           +          G+I+  ++
Sbjct: 110 VNSIAKRYSTSGKITFDDY 128

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167

 Score = 57.4 bits (139), Expect = 5e-10
 Identities = 26/145 (17%), Positives = 52/145 (35%), Gaps = 30/145 (20%)

Query: 239 SVLNNMRQFVKYSRLKQFALRALAS--------TLDDEE-------LADLRDQFDAIDVD 283
             L        Y        R + S        T+   E       L   R  F + D D
Sbjct: 25  RCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDSD 84

Query: 284 KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 343
           ++G++  +E+++AL   + ++L    V  I +     T G + F +++A  + +  L + 
Sbjct: 85  RSGTVDPQELQKAL-TTMGFRLNPQTVNSIAKRYS--TSGKITFDDYIACCVKLRALTD- 140

Query: 344 DSEKWHLRSQAAFEKFDIDRDGFIT 368
                      +F + D  + G + 
Sbjct: 141 -----------SFRRRDSAQQGMVN 154

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8 Length = 167

 Score = 40.8 bits (96), Expect = 2e-04
 Identities = 15/64 (23%), Positives = 25/64 (39%), Gaps = 12/64 (18%)

Query: 353 QAAFEKFDIDRDGFITPEELRM---HTGLKGSIDP--------LLEEADIDKDGRISLSE 401
              F      +DG I  +EL+     +G+ G   P        ++   D D  G +  +E
Sbjct: 5   YGYFASVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNE 63

Query: 402 FRRL 405
           F+ L
Sbjct: 64  FKEL 67

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} Length = 77

 Score = 66.8 bits (164), Expect = 3e-14
 Identities = 20/80 (25%), Positives = 44/80 (55%), Gaps = 3/80 (3%)

Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           L +E+  ++++ FD  D +K GSI   E++ A+   L + +K+  +LE++   D   +G 
Sbjct: 1   LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRA-LGFDVKKPEILELMNEYDREGNGY 59

Query: 325 VDFSEFVAATLHVHQLEEHD 344
           + F +F+   +   +++  D
Sbjct: 60  IGFDDFL--DIMTEKIKNRD 77

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus} Length = 77

 Score = 49.8 bits (120), Expect = 2e-08
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 6/56 (10%)

Query: 353 QAAFEKFDIDRDGFITPEELR--MHT-GLKGS---IDPLLEEADIDKDGRISLSEF 402
           + AF+ FD ++ G I   EL+  M   G       I  L+ E D + +G I   +F
Sbjct: 10  KEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDF 65

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A Length = 108

 Score = 67.3 bits (165), Expect = 3e-14
 Identities = 23/107 (21%), Positives = 37/107 (34%), Gaps = 18/107 (16%)

Query: 312 EILQAI-DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 370
           +I  A+ DC         +F   +    +      E         F   D D+ GFI  +
Sbjct: 10  DIAAALRDCQAPDSFSPKKFFQISGMSKKSSSQLKE--------IFRILDNDQSGFIEED 61

Query: 371 ELR---MHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT 408
           EL+                     L  AD D DG+I   EF+ ++++
Sbjct: 62  ELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEFQEMVQS 108

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A Length = 108

 Score = 66.9 bits (164), Expect = 6e-14
 Identities = 18/98 (18%), Positives = 36/98 (36%), Gaps = 3/98 (3%)

Query: 237 DISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQA 296
              +   +R               ++  +  +  + L++ F  +D D++G I  +E++  
Sbjct: 8   PSDIAAALRDCQAPDSFSPKKFFQISG-MSKKSSSQLKEIFRILDNDQSGFIEEDELKYF 66

Query: 297 LAK--DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 332
           L +       L  S     L A D + DG +   EF  
Sbjct: 67  LQRFESGARVLTASETKTFLAAADHDGDGKIGAEEFQE 104

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 71.6 bits (176), Expect = 7e-14
 Identities = 48/233 (20%), Positives = 81/233 (34%), Gaps = 76/233 (32%)

Query: 74  QMLRVAAECHLH--GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGS 131
           Q+++     +LH  GL+HRDMKP N L      +  +K  DFGLS      ++  + +  
Sbjct: 117 QLIK--VIKYLHSGGLLHRDMKPSNIL---LNAECHVKVADFGLSRSFVNIRRVTNNIPL 171

Query: 132 A----------------------YYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPF 167
           +                      +Y APE+L    K     D+WS+G I   +L   +P 
Sbjct: 172 SINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEIL-CGKPI 230

Query: 168 W------------------------DKTEDGIFKEVLRNKPDFRRKPW------------ 191
           +                        +  +    K ++ +  +                  
Sbjct: 231 FPGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKN 290

Query: 192 --------PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 236
                      +  A D + KLL  +P  R++A  AL HP+V    + +E P 
Sbjct: 291 LLLKINPKADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSIFHNPNEEPN 343

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} PDB: 3kmw_A* 3rep_A* Length = 271

 Score = 70.0 bits (172), Expect = 1e-13
 Identities = 34/186 (18%), Positives = 65/186 (34%), Gaps = 37/186 (19%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC-----HLHGL----VHRDMKPE 95
               G L + +    +    +        Q ++ A +       LH L        +   
Sbjct: 90  WMPYGSLYNVLHEGTNFVVDQ-------SQAVKFALDMARGMAFLHTLEPLIPRHALNSR 142

Query: 96  NFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPE----SDVW 151
           + +     ED + + +   +    +   +    + +  +VAPE L++K        +D+W
Sbjct: 143 SVMID---EDMTARISMADVKFSFQSPGR----MYAPAWVAPEALQKKPEDTNRRSADMW 195

Query: 152 SIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLL----V 207
           S  V+ + L+    PF D +   I  +V        R   P+I       V KL+     
Sbjct: 196 SFAVLLWELVTREVPFADLSNMEIGMKVALEG---LR---PTIPPGISPHVSKLMKICMN 249

Query: 208 KDPRAR 213
           +DP  R
Sbjct: 250 EDPAKR 255

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A Length = 214

 Score = 68.7 bits (168), Expect = 1e-13
 Identities = 45/185 (24%), Positives = 71/185 (38%), Gaps = 38/185 (20%)

Query: 249 KYSRLKQFALRALAST--LDDEELADLRDQF--------DAIDVDKNGSISLEEMRQALA 298
             SRL +  L        L  +E+     +F         +++      +  E+      
Sbjct: 27  SGSRLSKELLAEYQDLTFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQ-----I 81

Query: 299 KDLPWKLKESRVLE-ILQAIDCNT-DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAF 356
             LP +LK +   E I +    +     + F +F+   L V         K H     AF
Sbjct: 82  LSLP-ELKANPFKERICRVFSTSPAKDSLSFEDFLDL-LSVFSDTATPDIKSHY----AF 135

Query: 357 EKFDIDRDGFITPEELR--------MHTGLKGS-------IDPLLEEADIDKDGRISLSE 401
             FD D DG +  E+L              + S       ID +LEE+DID+DG I+LSE
Sbjct: 136 RIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSE 195

Query: 402 FRRLL 406
           F+ ++
Sbjct: 196 FQHVI 200

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} Length = 92

 Score = 65.3 bits (160), Expect = 1e-13
 Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 1/83 (1%)

Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           +D +   +L++ F   D D+NG IS  E+R  +  +L  KL +  V ++++  D + DG 
Sbjct: 3   MDTDAEEELKEAFKVFDKDQNGYISASELRHVM-INLGEKLTDEEVEQMIKEADLDGDGQ 61

Query: 325 VDFSEFVAATLHVHQLEEHDSEK 347
           V++ EFV   + V      +   
Sbjct: 62  VNYEEFVKMMMTVRGGGGGNGWS 84

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max} Length = 92

 Score = 58.4 bits (142), Expect = 4e-11
 Identities = 24/77 (31%), Positives = 49/77 (63%), Gaps = 10/77 (12%)

Query: 339 QLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS---IDPLLEEADID 392
            ++  D+E+  L+   AF+ FD D++G+I+  ELR   ++ G K +   ++ +++EAD+D
Sbjct: 2   HMDT-DAEE-ELK--EAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLD 57

Query: 393 KDGRISLSEFRRLLRTA 409
            DG+++  EF +++ T 
Sbjct: 58  GDGQVNYEEFVKMMMTV 74

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A Length = 109

 Score = 65.4 bits (160), Expect = 2e-13
 Identities = 23/118 (19%), Positives = 37/118 (31%), Gaps = 19/118 (16%)

Query: 301 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFD 360
           +   L    + + + A         D  +F        + +  D  K        F   D
Sbjct: 2   MTDLLSAEDIKKAIGA--FTAADSFDHKKFFQMV--GLKKKSADDVK------KVFHILD 51

Query: 361 IDRDGFITPEELRM---HTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRTA 409
            D+ GFI  +EL                     L+   D D DG+I + EF  L+  +
Sbjct: 52  KDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAES 109

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A Length = 109

 Score = 65.0 bits (159), Expect = 3e-13
 Identities = 18/103 (17%), Positives = 35/103 (33%), Gaps = 3/103 (2%)

Query: 232 SEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLE 291
           +++     +   +  F             +   L  +   D++  F  +D DK+G I  +
Sbjct: 3   TDLLSAEDIKKAIGAFTAADSFDHKKFFQMVG-LKKKSADDVKKVFHILDKDKSGFIEED 61

Query: 292 EMRQALAK--DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 332
           E+   L         L       ++ A D + DG +   EF  
Sbjct: 62  ELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFST 104

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* Length = 183

 Score = 67.1 bits (164), Expect = 2e-13
 Identities = 38/167 (22%), Positives = 62/167 (37%), Gaps = 34/167 (20%)

Query: 265 LDDEELADLRDQF--------DAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQA 316
           L  +E+     +F         +++      +  E++            KE     I + 
Sbjct: 14  LTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELK-ANPFKE----RICRV 68

Query: 317 IDCNT-DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-- 373
              +     + F +F+   L V         K H     AF  FD D DG +  E+L   
Sbjct: 69  FSTSPAKDSLSFEDFLDL-LSVFSDTATPDIKSHY----AFRIFDFDDDGTLNREDLSRL 123

Query: 374 ------MHTGLKGS-------IDPLLEEADIDKDGRISLSEFRRLLR 407
                      + S       ID +LEE+DID+DG I+LSEF+ ++ 
Sbjct: 124 VNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVIS 170

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A* Length = 183

 Score = 41.3 bits (97), Expect = 2e-04
 Identities = 17/94 (18%), Positives = 32/94 (34%), Gaps = 9/94 (9%)

Query: 258 LRALASTLDDEELAD-LRDQFDAIDVDKNGSISLEEMRQAL--------AKDLPWKLKES 308
           L  L+   D           F   D D +G+++ E++ + +           L     + 
Sbjct: 84  LDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQ 143

Query: 309 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE 342
            +  IL+  D + DG ++ SEF            
Sbjct: 144 LIDNILEESDIDRDGTINLSEFQHVISRSPDFAS 177

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Length = 198

 Score = 67.1 bits (164), Expect = 3e-13
 Identities = 25/154 (16%), Positives = 52/154 (33%), Gaps = 23/154 (14%)

Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW----KLKESRVLEILQAI 317
                 +    L   F A    ++G I  +E+++ L +                 ++  +
Sbjct: 24  GPAFPGQTQDPLYGYFAA-VAGQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSML 82

Query: 318 DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM--- 374
           D +  G + F+EF      ++              +  F  FD DR G + P+EL+    
Sbjct: 83  DRDMSGTMGFNEFKELWAVLNGW------------RQHFISFDTDRSGTVDPQELQKALT 130

Query: 375 HTGLKGSIDPLLEE--ADIDKDGRISLSEFRRLL 406
             G + S    +         +G+I+  ++    
Sbjct: 131 TMGFRLS-PQAVNSIAKRYSTNGKITFDDYIACC 163

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A Length = 198

 Score = 56.3 bits (136), Expect = 2e-09
 Identities = 26/145 (17%), Positives = 53/145 (36%), Gaps = 30/145 (20%)

Query: 239 SVLNNMRQFVKYSRLKQFALRALAS--------TLDDEE-------LADLRDQFDAIDVD 283
             L        Y        R + S        T+   E       L   R  F + D D
Sbjct: 56  RCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVLNGWRQHFISFDTD 115

Query: 284 KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 343
           ++G++  +E+++AL   + ++L    V  I +     T+G + F +++A  + +  L + 
Sbjct: 116 RSGTVDPQELQKAL-TTMGFRLSPQAVNSIAKRYS--TNGKITFDDYIACCVKLRALTD- 171

Query: 344 DSEKWHLRSQAAFEKFDIDRDGFIT 368
                      +F + D  + G + 
Sbjct: 172 -----------SFRRRDTAQQGVVN 185

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A* Length = 301

 Score = 68.2 bits (167), Expect = 5e-13
 Identities = 43/194 (22%), Positives = 71/194 (36%), Gaps = 48/194 (24%)

Query: 73  RQMLRVAAEC-----HLH----------GLVHRDMKPENFLFKSAKEDSSLKATDFGLSD 117
              LR+         HLH           + HRD+K +N L    K++      D GL+ 
Sbjct: 105 VSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILV---KKNGQCCIADLGLAV 161

Query: 118 FIKPGKKFQDI-----VGSAYYVAPEVLKRKSGPE-------SDVWSIGVITYILLCGRR 165
                    D+     VG+  Y+APEVL      +        D+W+ G++ + +     
Sbjct: 162 MHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMV 221

Query: 166 PFWDKTEDGI-FKEVLRNKPDF-----------RRKPWPS--ISNSAKDFVKKLLVK--- 208
                 +    F +V+ N P F           +R   P+   S+     + KL+ +   
Sbjct: 222 SNGIVEDYKPPFYDVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWY 281

Query: 209 -DPRARLTAAQALS 221
            +P ARLTA +   
Sbjct: 282 QNPSARLTALRIKK 295

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 2qlu_A* Length = 322

 Score = 68.2 bits (167), Expect = 7e-13
 Identities = 41/191 (21%), Positives = 74/191 (38%), Gaps = 48/191 (25%)

Query: 73  RQMLRVAAE-----CHLH------------GLVHRDMKPENFLFKSAKEDSSLKATDFGL 115
            ++  +A        +LH             + HRD+K +N L    K + +    DFGL
Sbjct: 121 NELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLL---KNNLTACIADFGL 177

Query: 116 SDFIKPGKKFQDI---VGSAYYVAPEVL------KRKSGPESDVWSIGVITYILLCGRRP 166
           +   + GK   D    VG+  Y+APEVL      +R +    D++++G++ + L      
Sbjct: 178 ALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTA 237

Query: 167 FWDKTEDGI--FKEVLRNKPDF--------RRKPWPSISNS-AKDFVKKLLVK------- 208
                ++ +  F+E +   P           +K  P + +   K     +L +       
Sbjct: 238 ADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWD 297

Query: 209 -DPRARLTAAQ 218
            D  ARL+A  
Sbjct: 298 HDAEARLSAGC 308

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 68.8 bits (168), Expect = 8e-13
 Identities = 45/268 (16%), Positives = 74/268 (27%), Gaps = 94/268 (35%)

Query: 51  LLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFK--------- 100
           LL  I+              +++Q+L+     H    ++H D+KPEN L           
Sbjct: 131 LLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRL 190

Query: 101 -------------------------------------SAKEDSSLKATDFGLSDFIKPGK 123
                                                   E   +K  D G + +    K
Sbjct: 191 AAEATEWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACW--VHK 248

Query: 124 KFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVITYILLCGRRPF--------------- 167
            F + + +  Y + EV +       +D+WS   + + L  G   F               
Sbjct: 249 HFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHI 308

Query: 168 --------------WDK--------TEDGIFKEVLRNKPDFRRKPWPSISN-------SA 198
                                    T+ G  K + + KP    +                
Sbjct: 309 ALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGF 368

Query: 199 KDFVKKLLVKDPRARLTAAQALSHPWVR 226
            DF+  +L   P  R TAA+ L HPW+ 
Sbjct: 369 TDFLLPMLELIPEKRATAAECLRHPWLN 396

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} Length = 337

 Score = 68.2 bits (167), Expect = 8e-13
 Identities = 47/222 (21%), Positives = 82/222 (36%), Gaps = 58/222 (26%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE-----CHLH----------GLVH 89
             E G L D +          K   +  + ML++A       CHLH           + H
Sbjct: 116 YHENGSLYDYL----------KSTTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAH 165

Query: 90  RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI-----VGSAYYVAPEVLKRKS 144
           RD+K +N L    K++ +    D GL+          DI     VG+  Y+ PEVL    
Sbjct: 166 RDLKSKNILV---KKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESL 222

Query: 145 GPES-------DVWSIGVITYILLCGRRPFWDKTEDGI-FKEVLRNKPDF---------- 186
                      D++S G+I + +           E  + + +++ + P +          
Sbjct: 223 NRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHDLVPSDPSYEDMREIVCIK 282

Query: 187 -RRKPWPS--ISNSAKDFVKKLLVK----DPRARLTAAQALS 221
             R  +P+   S+     + KL+ +    +P +RLTA +   
Sbjct: 283 KLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKK 324

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66

 Score = 61.8 bits (151), Expect = 1e-12
 Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)

Query: 273 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 332
               F  IDV+ +G++S EE++  +         E  +  I ++ID + +G +D +EF  
Sbjct: 2   AEALFKEIDVNGDGAVSYEEVKAFV-SKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAK 60

Query: 333 A 333
            
Sbjct: 61  F 61

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66

 Score = 54.5 bits (132), Expect = 4e-10
 Identities = 14/62 (22%), Positives = 31/62 (50%), Gaps = 6/62 (9%)

Query: 353 QAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLL 406
           +A F++ D++ DG ++ EE++     K +      +  + +  D D +G I  +EF +  
Sbjct: 3   EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFY 62

Query: 407 RT 408
            +
Sbjct: 63  GS 64

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica} Length = 66

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 9/42 (21%), Positives = 17/42 (40%), Gaps = 3/42 (7%)

Query: 257 ALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALA 298
            +    +  +++ L  +   F +ID D NG I   E  +   
Sbjct: 25  FVSKKRAIKNEQLLQLI---FKSIDADGNGEIDQNEFAKFYG 63

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 Length = 105

 Score = 62.9 bits (153), Expect = 1e-12
 Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 4/83 (4%)

Query: 254 KQFALRALASTLDD---EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRV 310
              A R + + L          +  +F+  D  K  +IS EE R    +     L + + 
Sbjct: 4   MATADRDILARLHKAVTSHYHAITQEFENFDTMKTNTISREEFRAICNR-RVQILTDEQF 62

Query: 311 LEILQAIDCNTDGLVDFSEFVAA 333
             +   +  N  G + + +F++ 
Sbjct: 63  DRLWNEMPVNAKGRLKYPDFLSR 85

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7 Length = 105

 Score = 55.2 bits (133), Expect = 6e-10
 Identities = 20/97 (20%), Positives = 32/97 (32%), Gaps = 17/97 (17%)

Query: 331 VAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS---IDP 384
           + A LH    +   S    +     FE FD  +   I+ EE R          +    D 
Sbjct: 11  ILARLH----KAVTSHYHAIT--QEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDR 64

Query: 385 LLEEADIDKDGRISLSEFRRLLRTASISSRNVPPSPS 421
           L  E  ++  GR+   +F      +  SS       +
Sbjct: 65  LWNEMPVNAKGRLKYPDF-----LSRFSSETAATPMA 96

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A* Length = 342

 Score = 67.5 bits (165), Expect = 1e-12
 Identities = 44/219 (20%), Positives = 80/219 (36%), Gaps = 58/219 (26%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC-----HLH----------GLVH 89
             E G L D +              V V  M+++A        HLH           + H
Sbjct: 121 YHEHGSLFDYL----------NRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAH 170

Query: 90  RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDI-----VGSAYYVAPEVLKRKS 144
           RD+K +N L    K++ +    D GL+          DI     VG+  Y+APEVL    
Sbjct: 171 RDLKSKNILV---KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSI 227

Query: 145 GPE-------SDVWSIGVITYILLCGRRPFWDKTEDGI-FKEVLRNKPDF---------- 186
             +       +D++++G++ + +           +  + + +++ + P            
Sbjct: 228 NMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQ 287

Query: 187 -RRKPWPS--ISNSAKDFVKKLLV----KDPRARLTAAQ 218
             R   P+   S  A   + K++      +  ARLTA +
Sbjct: 288 KLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALR 326

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens} Length = 310

 Score = 67.4 bits (165), Expect = 1e-12
 Identities = 37/168 (22%), Positives = 65/168 (38%), Gaps = 28/168 (16%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAA--EC-HLHGLVHRDMKPENFLFKS 101
             +GG L   I+   DS+Y        V     +A+     H   ++HRD+   N L   
Sbjct: 88  YIKGGTLRG-IIKSMDSQYPWS---QRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLV-- 141

Query: 102 AKEDSSLKATDFGLSDFI---------------KPGKKFQDIVGSAYYVAPEVLK-RKSG 145
            +E+ ++   DFGL+  +                  KK   +VG+ Y++APE++  R   
Sbjct: 142 -RENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYD 200

Query: 146 PESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS 193
            + DV+S G++   ++       D        +   N   F  +  P 
Sbjct: 201 EKVDVFSFGIVLCEIIGRVNADPDYLP--RTMDFGLNVRGFLDRYCPP 246

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165

 Score = 64.3 bits (157), Expect = 1e-12
 Identities = 25/139 (17%), Positives = 46/139 (33%), Gaps = 23/139 (16%)

Query: 273 LRDQFDAIDVDKNGSISLEEMRQALA----KDLPWKLKESRVLEILQAIDCNTDGLVDFS 328
           +   F A+   ++G +  EE+++ L                   ++  +D +  G + F+
Sbjct: 2   VYTYFSAVA-GQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFN 60

Query: 329 EFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM---HTGLKGSIDPL 385
            F      +          W    +  F   D D  G +   ELR      G + S    
Sbjct: 61  AFKELWAAL--------NAW----KENFMTVDQDGSGTVEHHELRQAIGLMGYRLS-PQT 107

Query: 386 LEE--ADIDKDGRISLSEF 402
           L        K+GRI   ++
Sbjct: 108 LTTIVKRYSKNGRIFFDDY 126

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165

 Score = 59.3 bits (144), Expect = 1e-10
 Identities = 24/145 (16%), Positives = 49/145 (33%), Gaps = 30/145 (20%)

Query: 239 SVLNNMRQFVKYSRLKQFALRALAS--------TLDDEE-------LADLRDQFDAIDVD 283
             L        YS       R + +         +           L   ++ F  +D D
Sbjct: 23  RCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAALNAWKENFMTVDQD 82

Query: 284 KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH 343
            +G++   E+RQA+   + ++L    +  I++      +G + F ++VA  + +  L + 
Sbjct: 83  GSGTVEHHELRQAI-GLMGYRLSPQTLTTIVKRYS--KNGRIFFDDYVACCVKLRALTD- 138

Query: 344 DSEKWHLRSQAAFEKFDIDRDGFIT 368
                       F K D  + G   
Sbjct: 139 -----------FFRKRDHLQQGSAN 152

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A Length = 165

 Score = 40.4 bits (95), Expect = 3e-04
 Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 12/64 (18%)

Query: 353 QAAFEKFDIDRDGFITPEELRM---HTGLKGSIDP--------LLEEADIDKDGRISLSE 401
              F      +DG +  EEL+     +G+ G+  P        ++   D D  G++  + 
Sbjct: 3   YTYFSAVA-GQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNA 61

Query: 402 FRRL 405
           F+ L
Sbjct: 62  FKEL 65

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A Length = 90

 Score = 61.9 bits (151), Expect = 2e-12
 Identities = 19/68 (27%), Positives = 35/68 (51%), Gaps = 1/68 (1%)

Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           L +E +A+ +  FD  D D  G IS +E+   + + L     +  +  I++ +D +  G 
Sbjct: 14  LSEEMIAEFKAAFDMFDADGGGDISTKELGTVM-RMLGQNPTKEELDAIIEEVDEDGSGT 72

Query: 325 VDFSEFVA 332
           +DF EF+ 
Sbjct: 73  IDFEEFLV 80

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A Length = 90

 Score = 51.5 bits (124), Expect = 1e-08
 Identities = 21/59 (35%), Positives = 30/59 (50%), Gaps = 6/59 (10%)

Query: 353 QAAFEKFDIDRDGFITPEELR--MHT-GLKGS---IDPLLEEADIDKDGRISLSEFRRL 405
           +AAF+ FD D  G I+ +EL   M   G   +   +D ++EE D D  G I   EF  +
Sbjct: 23  KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVM 81

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 Length = 67

 Score = 61.0 bits (149), Expect = 2e-12
 Identities = 13/62 (20%), Positives = 31/62 (50%), Gaps = 1/62 (1%)

Query: 271 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEF 330
           +  +  F+  D +K+G +SL+E R+           +  +++  + ID + +G ++  EF
Sbjct: 1   SSAKRVFEKFDKNKDGKLSLDEFREVA-LAFSPYFTQEDIVKFFEEIDVDGNGELNADEF 59

Query: 331 VA 332
            +
Sbjct: 60  TS 61

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5 Length = 67

 Score = 55.6 bits (135), Expect = 2e-10
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 6/61 (9%)

Query: 353 QAAFEKFDIDRDGFITPEELR---MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLL 406
           +  FEKFD ++DG ++ +E R   +      +   I    EE D+D +G ++  EF   +
Sbjct: 4   KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCI 63

Query: 407 R 407
            
Sbjct: 64  E 64

>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} Length = 107

 Score = 61.6 bits (150), Expect = 3e-12
 Identities = 11/92 (11%), Positives = 37/92 (40%), Gaps = 4/92 (4%)

Query: 244 MRQFVKYSRLKQFAL---RALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKD 300
            +Q  +   + +  L   +  +      +L   ++++   D++ NG I +  +++ L K 
Sbjct: 2   AQQEERLDEINKQFLDDPKYSSDEDLPSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEK- 60

Query: 301 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 332
           L        + +++  +   +     + +F+ 
Sbjct: 61  LGVPKTHLELKKLIGEVSSGSGETFSYPDFLR 92

>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens} Length = 107

 Score = 50.1 bits (120), Expect = 4e-08
 Identities = 11/59 (18%), Positives = 25/59 (42%), Gaps = 6/59 (10%)

Query: 355 AFEKFDIDRDGFITPEELR--MHT-GLKGS---IDPLLEEADIDKDGRISLSEFRRLLR 407
            + +FD++ +G I    L+  +   G+  +   +  L+ E         S  +F R++ 
Sbjct: 37  KYMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMML 95

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A Length = 86

 Score = 60.7 bits (148), Expect = 5e-12
 Identities = 21/86 (24%), Positives = 34/86 (39%), Gaps = 4/86 (4%)

Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK-DLPWKLKESRVLEILQAIDCN 320
           A+    +++AD    F   D + +G IS  E+  AL             V  ++  ID +
Sbjct: 2   AAEDTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLGSV---TPDEVRRMMAEIDTD 58

Query: 321 TDGLVDFSEFVAATLHVHQLEEHDSE 346
            DG + F EF         L +  S+
Sbjct: 59  GDGFISFDEFTDFARANRGLVKDVSK 84

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A Length = 86

 Score = 51.5 bits (124), Expect = 8e-09
 Identities = 21/71 (29%), Positives = 31/71 (43%), Gaps = 9/71 (12%)

Query: 353 QAAFEKFDIDRDGFITPEELRMHTGLKG-------SIDPLLEEADIDKDGRISLSEFRRL 405
           +  F++FD + DG I+  EL     LK         +  ++ E D D DG IS  EF   
Sbjct: 14  ERIFKRFDTNGDGKISSSELG--DALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDF 71

Query: 406 LRTASISSRNV 416
            R      ++V
Sbjct: 72  ARANRGLVKDV 82

>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A Length = 83

 Score = 60.3 bits (147), Expect = 6e-12
 Identities = 13/73 (17%), Positives = 32/73 (43%), Gaps = 5/73 (6%)

Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK-----DLPWKLKESRVLEILQAIDC 319
           +  +  A+L   F  +D + +G ++  E++  +        L     +    ++++  D 
Sbjct: 1   MACKVKAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADK 60

Query: 320 NTDGLVDFSEFVA 332
           N+DG +   EF+ 
Sbjct: 61  NSDGKISKEEFLN 73

>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A Length = 83

 Score = 58.0 bits (141), Expect = 4e-11
 Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 12/65 (18%)

Query: 353 QAAFEKFDIDRDGFITPEELR--MHT-GLKGS---------IDPLLEEADIDKDGRISLS 400
           +AAF+K D + DG++T  EL+  M T     +            L++ AD + DG+IS  
Sbjct: 10  EAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGKISKE 69

Query: 401 EFRRL 405
           EF   
Sbjct: 70  EFLNA 74

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} Length = 71

 Score = 59.8 bits (146), Expect = 6e-12
 Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)

Query: 268 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDF 327
             L DL+  F A D D +G I+++E+R+A+   L   L +  +  +++  D + DG V++
Sbjct: 3   AGLEDLQVAFRAFDQDGDGHITVDELRRAM-AGLGQPLPQEELDAMIREADVDQDGRVNY 61

Query: 328 SEFVA 332
            EF  
Sbjct: 62  EEFAR 66

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens} Length = 71

 Score = 57.5 bits (140), Expect = 4e-11
 Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 9/70 (12%)

Query: 344 DSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS---IDPLLEEADIDKDGRI 397
              +  L+   AF  FD D DG IT +ELR      G       +D ++ EAD+D+DGR+
Sbjct: 3   AGLE-DLQ--VAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRV 59

Query: 398 SLSEFRRLLR 407
           +  EF R+L 
Sbjct: 60  NYEEFARMLA 69

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} Length = 94

 Score = 60.4 bits (147), Expect = 8e-12
 Identities = 26/87 (29%), Positives = 46/87 (52%), Gaps = 12/87 (13%)

Query: 326 DFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS- 381
              E +        +++ DSE+  +R   AF   D D +G+I+  ELR    + G K + 
Sbjct: 11  SSGENLYFQSL---MKDTDSEE-EIR--EAFRVEDKDGNGYISAAELRHVMTNLGEKLTD 64

Query: 382 --IDPLLEEADIDKDGRISLSEFRRLL 406
             +D ++ EADID DG+++  EF +++
Sbjct: 65  EEVDEMIREADIDGDGQVNYEEFVQMM 91

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus} Length = 94

 Score = 57.3 bits (139), Expect = 1e-10
 Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)

Query: 266 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 325
           D +   ++R+ F   D D NG IS  E+R  +  +L  KL +  V E+++  D + DG V
Sbjct: 24  DTDSEEEIREAFRVEDKDGNGYISAAELRHVM-TNLGEKLTDEEVDEMIREADIDGDGQV 82

Query: 326 DFSEFVA 332
           ++ EFV 
Sbjct: 83  NYEEFVQ 89

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A Length = 147

 Score = 59.2 bits (143), Expect = 7e-11
 Identities = 10/68 (14%), Positives = 30/68 (44%), Gaps = 1/68 (1%)

Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
               +L   + ++   D++ NG I +  +++ L K L        +  +++ +   ++  
Sbjct: 42  DLPSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEK-LGVPKTHLELKRLIREVSSGSEET 100

Query: 325 VDFSEFVA 332
             +S+F+ 
Sbjct: 101 FSYSDFLR 108

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A Length = 147

 Score = 53.8 bits (129), Expect = 6e-09
 Identities = 15/104 (14%), Positives = 39/104 (37%), Gaps = 15/104 (14%)

Query: 312 EILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE 371
           +  + ++      +D  ++        +LE           +  + +FD++ +G I    
Sbjct: 19  QQEERLEGINKQFLDDPKYSNDEDLPSKLEAF---------KVKYMEFDLNGNGDIDIMS 69

Query: 372 LR--MHT-GLKGS---IDPLLEEADIDKDGRISLSEFRRLLRTA 409
           L+  +   G+  +   +  L+ E     +   S S+F R++   
Sbjct: 70  LKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGK 113

>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A Length = 81

 Score = 57.2 bits (139), Expect = 8e-11
 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 10/73 (13%)

Query: 342 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGS----IDPLLEEADIDKD 394
             D E+  +    AF+ FD + DG I  +E +      G +      ++  ++EAD D +
Sbjct: 3   RQDDEE-EIL--RAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGN 59

Query: 395 GRISLSEFRRLLR 407
           G I + EF  L++
Sbjct: 60  GVIDIPEFMDLIK 72

>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A Length = 81

 Score = 56.8 bits (138), Expect = 9e-11
 Identities = 14/68 (20%), Positives = 33/68 (48%)

Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           +  ++  ++   F   D + +G I  +E +  + K     L ++ V E ++  D + +G+
Sbjct: 2   VRQDDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGV 61

Query: 325 VDFSEFVA 332
           +D  EF+ 
Sbjct: 62  IDIPEFMD 69

>1cb1_A Calbindin D9K; calcium-binding protein; NMR {Sus scrofa} SCOP: a.39.1.1 Length = 78

 Score = 56.6 bits (137), Expect = 1e-10
 Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 2/66 (3%)

Query: 268 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVL-EILQAIDCNTDGLVD 326
            EL  + +++ A + D    +S EE++Q +  + P  LK  R L ++ Q +D N DG V 
Sbjct: 7   AELKSIFEKYAAKEGDP-NQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVS 65

Query: 327 FSEFVA 332
           F EF  
Sbjct: 66  FEEFQV 71

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A Length = 150

 Score = 57.6 bits (139), Expect = 3e-10
 Identities = 10/68 (14%), Positives = 29/68 (42%), Gaps = 1/68 (1%)

Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
              E+L   ++++   D++  G I L  +++ + K L        + +++  +       
Sbjct: 44  NLPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEK-LGVPKTHLEMKKMISEVTGGVSDT 102

Query: 325 VDFSEFVA 332
           + + +FV 
Sbjct: 103 ISYRDFVN 110

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A Length = 150

 Score = 49.1 bits (117), Expect = 2e-07
 Identities = 12/69 (17%), Positives = 28/69 (40%), Gaps = 6/69 (8%)

Query: 340 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR--MHT-GLKGS---IDPLLEEADIDK 393
            +E +  +     +  + +FD++ +G I    L+  M   G+  +   +  ++ E     
Sbjct: 40  SDEENLPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGV 99

Query: 394 DGRISLSEF 402
              IS  +F
Sbjct: 100 SDTISYRDF 108

>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 Length = 78

 Score = 54.5 bits (132), Expect = 5e-10
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 5/67 (7%)

Query: 355 AFEKFDIDRDGFITPEELR--MHT---GLKGSIDPLLEEADIDKDGRISLSEFRRLLRTA 409
            F++FD + DG I+  EL   + T        +  ++ E D D DG I  +EF       
Sbjct: 8   IFKRFDTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEFISFCNAN 67

Query: 410 SISSRNV 416
               ++V
Sbjct: 68  PGLMKDV 74

>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10 Length = 78

 Score = 50.6 bits (122), Expect = 1e-08
 Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)

Query: 272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFV 331
           D+   F   D + +G ISL E+  AL   L     +  V  ++  ID + DG +DF+EF+
Sbjct: 4   DMERIFKRFDTNGDGKISLSELTDALRT-LGSTSADE-VQRMMAEIDTDGDGFIDFNEFI 61

Query: 332 A 332
           +
Sbjct: 62  S 62

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A Length = 296

 Score = 57.0 bits (138), Expect = 3e-09
 Identities = 31/140 (22%), Positives = 60/140 (42%), Gaps = 12/140 (8%)

Query: 49  GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 108
           G  L+ +      +++ K   ++  QM+      H    +HRD+KP+NFL    K+ + +
Sbjct: 88  GPSLEDLFNFCSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLV 147

Query: 109 KATDFGLSDFIK--------PGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIG-VITY 158
              DFGL+   +        P ++ +++ G+A Y +             D+ S+G V+ Y
Sbjct: 148 YIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMY 207

Query: 159 ILLCGRRPFWDKTEDGIFKE 178
               G  P W   +    ++
Sbjct: 208 -FNLGSLP-WQGLKAATKRQ 225

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens} Length = 327

 Score = 56.1 bits (136), Expect = 7e-09
 Identities = 35/160 (21%), Positives = 55/160 (34%), Gaps = 39/160 (24%)

Query: 28  TRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH---L 84
           T  ++++  L           G LLD  + +       +       Q   +A   +    
Sbjct: 88  TSTVQLITQL--------MPFGCLLDY-VREHKDNIGSQYLLNWCVQ---IAKGMNYLED 135

Query: 85  HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV--------- 135
             LVHRD+   N L    K    +K TDFGL+  +              Y          
Sbjct: 136 RRLVHRDLAARNVL---VKTPQHVKITDFGLAKLLGAE--------EKEYHAEGGKVPIK 184

Query: 136 --APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 171
             A E +  R    +SDVWS GV  + ++  G +P+    
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group} Length = 483

 Score = 55.8 bits (134), Expect = 1e-08
 Identities = 31/130 (23%), Positives = 56/130 (43%), Gaps = 12/130 (9%)

Query: 49  GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 108
           G  L+ +      + + K   ++  QM+      H    +HRD+KP+NFL    +  + +
Sbjct: 86  GPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQV 145

Query: 109 KATDFGLSDFIK--------PGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIG-VITY 158
              DFGL+   +        P ++ +++ G+A Y +             D+ S+G V+ Y
Sbjct: 146 YIIDFGLAKKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMY 205

Query: 159 ILLCGRRPFW 168
             L G  P W
Sbjct: 206 -FLRGSLP-W 213

>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A Length = 76

 Score = 49.9 bits (120), Expect = 2e-08
 Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)

Query: 268 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVL-EILQAIDCNTDGLVD 326
           EE+    + F A +      IS EE++  +    P  LK    L E+++ +D N DG V 
Sbjct: 5   EEIKGAFEVFAAKE-GDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVS 63

Query: 327 FSEFVA 332
           F EF+ 
Sbjct: 64  FEEFLV 69

>1qx2_A Vitamin D-dependent calcium-binding protein, INTE; EF-hand (helix-loop-helix) calcium binding protein, four-HEL domain, protein engineering; HET: FME; 1.44A {Bos taurus} SCOP: a.39.1.1 PDB: 1kcy_A 1kqv_A 1ksm_A 1n65_A 1ht9_A 4icb_A 1cdn_A 1clb_A 2bca_A 1ig5_A 1igv_A 3icb_A 1d1o_A 1b1g_A 2bcb_A 1boc_A 1bod_A Length = 76

 Score = 48.0 bits (115), Expect = 9e-08
 Identities = 18/67 (26%), Positives = 30/67 (44%), Gaps = 10/67 (14%)

Query: 354 AAFEKFDIDRD--GFITPEELRM--------HTGLKGSIDPLLEEADIDKDGRISLSEFR 403
            AFE F         I+ EEL++              ++D ++EE D + DG +S  EF 
Sbjct: 9   GAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFL 68

Query: 404 RLLRTAS 410
            +++  S
Sbjct: 69  VMMKKIS 75

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens} Length = 336

 Score = 54.1 bits (130), Expect = 3e-08
 Identities = 41/188 (21%), Positives = 69/188 (36%), Gaps = 57/188 (30%)

Query: 82  CHLH-----------GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQD--- 127
            +LH            + HRD+   N L    K D +   +DFGLS  +   +  +    
Sbjct: 125 AYLHTELPRGDHYKPAISHRDLNSRNVLV---KNDGTCVISDFGLSMRLTGNRLVRPGEE 181

Query: 128 ------IVGSAYYVAPEVLK--------RKSGPESDVWSIGVITYILLCG---------- 163
                  VG+  Y+APEVL+          +  + D++++G+I + +             
Sbjct: 182 DNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESV 241

Query: 164 ---RRPFWDK-----TEDGIFKEVLRNK--PDFRRKPWPSISNSAKDFVKKLLVK----D 209
              +  F  +     T + +   V R K  P F    W   S + +   K+ +      D
Sbjct: 242 PEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEA-WKENSLAVRSL-KETIEDCWDQD 299

Query: 210 PRARLTAA 217
             ARLTA 
Sbjct: 300 AEARLTAQ 307

>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C Length = 143

 Score = 51.5 bits (123), Expect = 3e-08
 Identities = 17/71 (23%), Positives = 26/71 (36%), Gaps = 18/71 (25%)

Query: 355 AFEKFDIDRDGFITPEELR---MHTG---------------LKGSIDPLLEEADIDKDGR 396
            F+  D D +  +   EL     H                 L   ID +L + D + DG 
Sbjct: 73  YFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDELINIIDGVLRDDDKNNDGY 132

Query: 397 ISLSEFRRLLR 407
           I  +EF + L+
Sbjct: 133 IDYAEFAKSLQ 143

>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C Length = 143

 Score = 44.6 bits (105), Expect = 8e-06
 Identities = 18/87 (20%), Positives = 32/87 (36%), Gaps = 13/87 (14%)

Query: 258 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVL------ 311
           +    + +  +EL      F   D D N  +   E+  A+      +  E   L      
Sbjct: 57  INKPEAEMSPQEL--QLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPLMSEDEL 114

Query: 312 -----EILQAIDCNTDGLVDFSEFVAA 333
                 +L+  D N DG +D++EF  +
Sbjct: 115 INIIDGVLRDDDKNNDGYIDYAEFAKS 141

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 333

 Score = 53.5 bits (129), Expect = 4e-08
 Identities = 40/156 (25%), Positives = 64/156 (41%), Gaps = 40/156 (25%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENF 97
             E G L    L +KD  ++       V Q++ +         +L     VHRD+   N 
Sbjct: 127 YMENGALDK-FLREKDGEFS-------VLQLVGMLRGIAAGMKYLANMNYVHRDLAARNI 178

Query: 98  LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV----------APEVLK-RKSGP 146
           L      +   K +DFGLS  +      +D   + Y            APE +  RK   
Sbjct: 179 L---VNSNLVCKVSDFGLSRVL------EDDPEATYTTSGGKIPIRWTAPEAISYRKFTS 229

Query: 147 ESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLR 181
            SDVWS G++ + ++  G RP+W+ +      EV++
Sbjct: 230 ASDVWSFGIVMWEVMTYGERPYWELSN----HEVMK 261

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A* Length = 330

 Score = 53.2 bits (128), Expect = 6e-08
 Identities = 34/142 (23%), Positives = 61/142 (42%), Gaps = 14/142 (9%)

Query: 49  GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF--KSAKEDS 106
           G  L+ +    D  ++ K   ++  Q++      H   L++RD+KPENFL      K   
Sbjct: 88  GPSLEDLFDLCDRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQ 147

Query: 107 SLKATDFGLS-DFI-------KPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIG-VI 156
            +   DF L+ ++I        P ++ + + G+A Y++      K      D+ ++G + 
Sbjct: 148 VIHIIDFALAKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMF 207

Query: 157 TYILLCGRRPFWDKTEDGIFKE 178
            Y  L G  P W   +    KE
Sbjct: 208 MY-FLRGSLP-WQGLKADTLKE 227

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A* Length = 656

 Score = 54.1 bits (130), Expect = 6e-08
 Identities = 39/155 (25%), Positives = 61/155 (39%), Gaps = 40/155 (25%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENF 97
           LC  GEL   +  +K S        + +  ++  A +      +L     VHRD+   N 
Sbjct: 471 LCTLGELRSFLQVRKFS--------LDLASLILYAYQLSTALAYLESKRFVHRDIAARNV 522

Query: 98  LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV-----------APEVLK-RKSG 145
           L      +  +K  DFGLS +++          S YY            APE +  R+  
Sbjct: 523 L---VSSNDCVKLGDFGLSRYME---------DSTYYKASKGKLPIKWMAPESINFRRFT 570

Query: 146 PESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEV 179
             SDVW  GV  + IL+ G +PF     + +   +
Sbjct: 571 SASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRI 605

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A* Length = 327

 Score = 53.1 bits (128), Expect = 6e-08
 Identities = 32/148 (21%), Positives = 57/148 (38%), Gaps = 32/148 (21%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENF 97
           L  GG+L   +   +      + +++ +  +L VA +      +L  +  +HRD+   N 
Sbjct: 114 LMAGGDLKSFLRETRPR--PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNC 171

Query: 98  LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKS 144
           L          K  DFG++         +DI  ++YY              PE       
Sbjct: 172 LLTCPGPGRVAKIGDFGMA---------RDIYRASYYRKGGCAMLPVKWMPPEAFMEGIF 222

Query: 145 GPESDVWSIGVITY-ILLCGRRPFWDKT 171
             ++D WS GV+ + I   G  P+  K+
Sbjct: 223 TSKTDTWSFGVLLWEIFSLGYMPYPSKS 250

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 54.1 bits (129), Expect = 6e-08
 Identities = 48/296 (16%), Positives = 89/296 (30%), Gaps = 65/296 (21%)

Query: 140 LKRKSGPES-----DVWSIGVITY------ILLCGRRPFWDK--TEDGIFKEVLRNKPDF 186
           LK K          +V +            ILL  R     K  T+            D 
Sbjct: 238 LKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTR----FKQVTDFLSAATTTHISLDH 293

Query: 187 RRKPWPSISNSAKDFVKKLLVKD---PRARLTAAQALS-HPWVREGGDASEIPIDISVLN 242
                 +        +K L  +    PR      + L+ +P        S I   I    
Sbjct: 294 HSMTL-TPDEVKSLLLKYLDCRPQDLPR------EVLTTNPRR-----LSIIAESIRDGL 341

Query: 243 NMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDV-DKNGSISLEEMRQALAKDL 301
                 K+    +     + S+L+  E A+ R  FD + V   +  I        L+  L
Sbjct: 342 ATWDNWKHVNCDKLT-TIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPT----ILLS--L 394

Query: 302 PW-KLKESRVLEILQAIDCNTDGLV--DFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEK 358
            W  + +S V+ ++     +   LV     E    T+ +  +  +   K  L ++ A  +
Sbjct: 395 IWFDVIKSDVMVVVN--KLHKYSLVEKQPKES---TISIPSI--YLELKVKLENEYALHR 447

Query: 359 FDIDRDGFITPEELRMHTGLKGSIDPL--------LEEADIDKDGRISLSEFRRLL 406
             +D      P+       +   +D          L+  +  +     ++ FR + 
Sbjct: 448 SIVDHYNI--PKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPER----MTLFRMVF 497

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A* Length = 377

 Score = 53.4 bits (129), Expect = 6e-08
 Identities = 34/148 (22%), Positives = 58/148 (39%), Gaps = 41/148 (27%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC-------HLHGLVHRDMKPENF 97
           L +GG+ L   L  + +R       + V+ +L++  +             +HRD+   N 
Sbjct: 193 LVQGGDFLTF-LRTEGAR-------LRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNC 244

Query: 98  LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKS 144
           L     E + LK +DFG+S         ++     Y              APE L   + 
Sbjct: 245 LVT---EKNVLKISDFGMS---------REEADGVYAASGGLRQVPVKWTAPEALNYGRY 292

Query: 145 GPESDVWSIGVITY-ILLCGRRPFWDKT 171
             ESDVWS G++ +     G  P+ + +
Sbjct: 293 SSESDVWSFGILLWETFSLGASPYPNLS 320

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A Length = 364

 Score = 53.2 bits (128), Expect = 6e-08
 Identities = 26/130 (20%), Positives = 46/130 (35%), Gaps = 13/130 (10%)

Query: 49  GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 108
           G  L +I      R++ K    +  ++L +    H H  VH D+K  N L  + K    +
Sbjct: 135 GSDLQKIYEANAKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLL-NYKNPDQV 193

Query: 109 KATDFGLSDFIKPGKKFQDI--------VGSAYYVAPEV-LKRKSGPESDVWSIG-VITY 158
              D+GL+    P    +           G+  + + +           D+  +G  +  
Sbjct: 194 YLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQ 253

Query: 159 ILLCGRRPFW 168
             L G  P W
Sbjct: 254 -WLTGHLP-W 261

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B* Length = 291

 Score = 52.6 bits (127), Expect = 7e-08
 Identities = 34/148 (22%), Positives = 51/148 (34%), Gaps = 40/148 (27%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENF 97
           L   G LLDR+   +           ++  + R A +      +L     +HRD+   N 
Sbjct: 101 LAPLGSLLDRLRKHQGH--------FLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNL 152

Query: 98  LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKS 144
           L  +      +K  DFGL   +             +YV            APE LK R  
Sbjct: 153 LLAT---RDLVKIGDFGLMRALPQNDD--------HYVMQEHRKVPFAWCAPESLKTRTF 201

Query: 145 GPESDVWSIGVITY-ILLCGRRPFWDKT 171
              SD W  GV  + +   G+ P+    
Sbjct: 202 SHASDTWMFGVTLWEMFTYGQEPWIGLN 229

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens} Length = 367

 Score = 52.8 bits (127), Expect = 8e-08
 Identities = 32/148 (21%), Positives = 56/148 (37%), Gaps = 32/148 (21%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENF 97
           L  GG+L   +   +      + +++ +  +L VA +      +L  +  +HRD+   N 
Sbjct: 155 LMAGGDLKSFLRETRPR--PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNC 212

Query: 98  LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKS 144
           L          K  DFG++         +DI  + YY              PE       
Sbjct: 213 LLTCPGPGRVAKIGDFGMA---------RDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIF 263

Query: 145 GPESDVWSIGVITY-ILLCGRRPFWDKT 171
             ++D WS GV+ + I   G  P+  K+
Sbjct: 264 TSKTDTWSFGVLLWEIFSLGYMPYPSKS 291

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A* Length = 289

 Score = 52.3 bits (126), Expect = 1e-07
 Identities = 27/144 (18%), Positives = 48/144 (33%), Gaps = 30/144 (20%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH---LHGLVHRDMKPENFL--- 98
             + G L    L K  +         V +Q   +AA  H    + L+H ++  +N L   
Sbjct: 93  FVKFGSLDT-YLKKNKNCINILWKLEVAKQ---LAAAMHFLEENTLIHGNVCAKNILLIR 148

Query: 99  --FKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY------VAPEVLK--RKSGPES 148
              +       +K +D G+S           ++           V PE ++  +     +
Sbjct: 149 EEDRKTGNPPFIKLSDPGIS---------ITVLPKDILQERIPWVPPECIENPKNLNLAT 199

Query: 149 DVWSIGVITY-ILLCGRRPFWDKT 171
           D WS G   + I   G +P     
Sbjct: 200 DKWSFGTTLWEICSGGDKPLSALD 223

>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 Length = 92

 Score = 48.6 bits (116), Expect = 1e-07
 Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 3/70 (4%)

Query: 264 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 323
            + DE+     +QF  I  D NG I     ++   K    KL    +  I +  D + DG
Sbjct: 2   KITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTK---SKLPILELSHIWELSDFDKDG 58

Query: 324 LVDFSEFVAA 333
            +   EF AA
Sbjct: 59  ALTLDEFCAA 68

>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6 Length = 92

 Score = 44.3 bits (105), Expect = 3e-06
 Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 4/56 (7%)

Query: 351 RSQAAFEKFDIDRDGFITPEELR---MHTGL-KGSIDPLLEEADIDKDGRISLSEF 402
                F+    D +GFI     +     + L    +  + E +D DKDG ++L EF
Sbjct: 10  YYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALTLDEF 65

>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1 Length = 863

 Score = 53.0 bits (126), Expect = 1e-07
 Identities = 28/127 (22%), Positives = 56/127 (44%), Gaps = 7/127 (5%)

Query: 249 KYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 308
             + ++   L   A  +  E++ + R  F+  D  K G +  E+ R  L   + + + E+
Sbjct: 703 TINEVENQILTRDAKGISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLI-SMGYNMGEA 761

Query: 309 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 368
               I+  +D N  G+V F  F+       +  + D+     +  A+F+    D++ +IT
Sbjct: 762 EFARIMSIVDPNRMGVVTFQAFID--FMSRETADTDTAD---QVMASFKILAGDKN-YIT 815

Query: 369 PEELRMH 375
            +ELR  
Sbjct: 816 VDELRRE 822

>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 95

 Score = 48.5 bits (116), Expect = 1e-07
 Identities = 16/70 (22%), Positives = 26/70 (37%), Gaps = 3/70 (4%)

Query: 264 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 323
            +   E A   + F   D D +G +S  E+R+   K     L  + +  I    D    G
Sbjct: 3   VVSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLK---TGLPSTLLAHIWSLCDTKDCG 59

Query: 324 LVDFSEFVAA 333
            +   +F  A
Sbjct: 60  KLSKDQFALA 69

>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 95

 Score = 46.2 bits (110), Expect = 8e-07
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 4/56 (7%)

Query: 351 RSQAAFEKFDIDRDGFITPEELR---MHTGL-KGSIDPLLEEADIDKDGRISLSEF 402
           +    F K D D DGF++  E+R   + TGL    +  +    D    G++S  +F
Sbjct: 11  KYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWSLCDTKDCGKLSKDQF 66

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A* Length = 298

 Score = 52.0 bits (125), Expect = 1e-07
 Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 12/141 (8%)

Query: 49  GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF--KSAKEDS 106
           G  L+ +L     +++ K  A+  +QML      H   LV+RD+KP+NFL    ++K  +
Sbjct: 89  GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNAN 148

Query: 107 SLKATDFGLS-DFI-------KPGKKFQDIVGSAYYVAPEV-LKRKSGPESDVWSIGVIT 157
            +   DFG+   +         P ++ +++ G+A Y++    L R+     D+ ++G + 
Sbjct: 149 MIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVF 208

Query: 158 YILLCGRRPFWDKTEDGIFKE 178
              L G  P W   +    K+
Sbjct: 209 MYFLRGSLP-WQGLKAATNKQ 228

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A* Length = 281

 Score = 51.5 bits (124), Expect = 2e-07
 Identities = 41/162 (25%), Positives = 62/162 (38%), Gaps = 48/162 (29%)

Query: 30  PMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE-----CHL 84
           P+ I++ L        C  GEL   +  +K S        + +  ++  A +      +L
Sbjct: 89  PVWIIMEL--------CTLGELRSFLQVRKYS--------LDLASLILYAYQLSTALAYL 132

Query: 85  --HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------- 135
                VHRD+   N L      +  +K  DFGLS         + +  S YY        
Sbjct: 133 ESKRFVHRDIAARNVL---VSSNDCVKLGDFGLS---------RYMEDSTYYKASKGKLP 180

Query: 136 ----APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 171
               APE +  R+    SDVW  GV  + IL+ G +PF    
Sbjct: 181 IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVK 222

>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A Length = 93

 Score = 47.8 bits (114), Expect = 2e-07
 Identities = 13/66 (19%), Positives = 33/66 (50%), Gaps = 2/66 (3%)

Query: 268 EELADLRDQFD--AIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 325
           + L  + D +   ++      ++  +++++ L  + P  +++       + +D NTDG V
Sbjct: 7   KALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAV 66

Query: 326 DFSEFV 331
           +F EF+
Sbjct: 67  NFQEFL 72

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* 2jiu_A* ... Length = 327

 Score = 51.6 bits (124), Expect = 2e-07
 Identities = 35/160 (21%), Positives = 55/160 (34%), Gaps = 39/160 (24%)

Query: 28  TRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH---L 84
           T  ++++  L           G LLD  + +       +       Q   +A   +    
Sbjct: 88  TSTVQLITQL--------MPFGCLLDY-VREHKDNIGSQYLLNWCVQ---IAKGMNYLED 135

Query: 85  HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV--------- 135
             LVHRD+   N L    K    +K TDFGL+  +              Y          
Sbjct: 136 RRLVHRDLAARNVL---VKTPQHVKITDFGLAKLLGAE--------EKEYHAEGGKVPIK 184

Query: 136 --APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 171
             A E +  R    +SDVWS GV  + ++  G +P+    
Sbjct: 185 WMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIP 224

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens} Length = 345

 Score = 51.3 bits (123), Expect = 2e-07
 Identities = 28/128 (21%), Positives = 50/128 (39%), Gaps = 19/128 (14%)

Query: 56  LAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 115
           ++ ++  + +     +  +ML V    H +  VH D+K  N L    K    +   D+GL
Sbjct: 141 ISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLL-GYKNPDQVYLADYGL 199

Query: 116 SDFIKPGKKFQDI--------VGSAYYVAPEVLKRKSGPE----SDVWSIG-VITYILLC 162
           S    P    +           G+  + + +  K   G      SDV  +G  +    LC
Sbjct: 200 SYRYCPNGNHKQYQENPRKGHNGTIEFTSLDAHK---GVALSRRSDVEILGYCMLR-WLC 255

Query: 163 GRRPFWDK 170
           G+ P W++
Sbjct: 256 GKLP-WEQ 262

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A* Length = 267

 Score = 50.7 bits (122), Expect = 3e-07
 Identities = 29/143 (20%), Positives = 55/143 (38%), Gaps = 32/143 (22%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH---LHGLVHRDMKPENFLFKS 101
             E G L D  L  +   +  +    +      V           ++HRD+   N L   
Sbjct: 84  FMEHGCLSD-YLRTQRGLFAAETLLGMCLD---VCEGMAYLEEACVIHRDLAARNCL--- 136

Query: 102 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV-----------APEVLK-RKSGPESD 149
             E+  +K +DFG++         + ++   Y             +PEV    +   +SD
Sbjct: 137 VGENQVIKVSDFGMT---------RFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSD 187

Query: 150 VWSIGVITY-ILLCGRRPFWDKT 171
           VWS GV+ + +   G+ P+ +++
Sbjct: 188 VWSFGVLMWEVFSEGKIPYENRS 210

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus} Length = 323

 Score = 50.8 bits (122), Expect = 3e-07
 Identities = 38/180 (21%), Positives = 64/180 (35%), Gaps = 45/180 (25%)

Query: 23  PMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE- 81
                  PM ++LP          + G+L   +     SR  E    + ++ ++R   + 
Sbjct: 99  AKGRLPIPM-VILPF--------MKHGDLHAFL---LASRIGENPFNLPLQTLVRFMVDI 146

Query: 82  ----CHL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV 135
                +L     +HRD+   N +     ED ++   DFGLS         + I    YY 
Sbjct: 147 ACGMEYLSSRNFIHRDLAARNCM---LAEDMTVCVADFGLS---------RKIYSGDYYR 194

Query: 136 ------------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLR 181
                       A E L        SDVW+ GV  + I+  G+ P+       I+  ++ 
Sbjct: 195 QGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIG 254

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} PDB: 3sxr_A* Length = 268

 Score = 50.6 bits (122), Expect = 3e-07
 Identities = 25/100 (25%), Positives = 42/100 (42%), Gaps = 25/100 (25%)

Query: 85  HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV--------- 135
           H  +HRD+   N L      D  +K +DFG++         + ++   Y           
Sbjct: 123 HQFIHRDLAARNCL---VDRDLCVKVSDFGMT---------RYVLDDQYVSSVGTKFPVK 170

Query: 136 --APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 171
             APEV    K   +SDVW+ G++ + +   G+ P+   T
Sbjct: 171 WSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYT 210

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A* Length = 307

 Score = 50.6 bits (122), Expect = 3e-07
 Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 17/94 (18%)

Query: 88  VHRDMKPENFLFKSAKEDSSLKA--TDFGLSDFIKPGKKFQD------IVGSAYYVAPEV 139
           +HRD+K  N L      D +  A  +DFGL+   +  +KF        IVG+  Y+APE 
Sbjct: 155 IHRDIKSANILL-----DEAFTAKISDFGLA---RASEKFAQTVMTSRIVGTTAYMAPEA 206

Query: 140 LKRKSGPESDVWSIGVITYILLCGRRPFWDKTED 173
           L+ +  P+SD++S GV+   ++ G     D+  +
Sbjct: 207 LRGEITPKSDIYSFGVVLLEIITGLPAV-DEHRE 239

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7 Length = 287

 Score = 50.3 bits (121), Expect = 3e-07
 Identities = 37/161 (22%), Positives = 54/161 (33%), Gaps = 40/161 (24%)

Query: 28  TRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH---L 84
              + +V+ +          GG L    L  K       +   V   + +V+        
Sbjct: 81  AEALMLVMEM--------AGGGPLHKF-LVGKREEIPVSN---VAELLHQVSMGMKYLEE 128

Query: 85  HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV--------- 135
              VHRD+   N L          K +DFGLS  +            +YY          
Sbjct: 129 KNFVHRDLAARNVL---LVNRHYAKISDFGLSKALG--------ADDSYYTARSAGKWPL 177

Query: 136 ---APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 171
              APE +  RK    SDVWS GV  +  L  G++P+    
Sbjct: 178 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK 218

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900

 Score = 51.7 bits (123), Expect = 4e-07
 Identities = 30/179 (16%), Positives = 58/179 (32%), Gaps = 42/179 (23%)

Query: 270 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSE 329
           + +    F   D+DK+GS+S  EMR A+ +   +KL   ++ +++ A   + + ++DF  
Sbjct: 606 IRNYLTIFRKFDLDKSGSMSAYEMRMAI-EAAGFKLP-CQLHQVIVARFADDELIIDFDN 663

Query: 330 FVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT-------------------PE 370
           FV   + +  L +             F++ D +  G I                      
Sbjct: 664 FVRCLVRLEILFK------------IFKQLDPENTGTIQLDLISWLSFSVLGKLAAAIEH 711

Query: 371 ELRMHTGLKGSIDPLLEEADI---------DKDGRISLSEFRRLLRTASISSRNVPPSP 420
               H           EE              D  +S +E   +L        ++    
Sbjct: 712 HHHHHMHYSNIEANESEEERQFRKLFVQLAGDDMEVSATELMNILNKVVTRHPDLKTDG 770

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900

 Score = 47.1 bits (111), Expect = 9e-06
 Identities = 19/112 (16%), Positives = 39/112 (34%), Gaps = 21/112 (18%)

Query: 264 TLDDEELADL-------RDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQA 316
            L  EE   L       +  +   + D++G+I   E+  A  +   + L    +  ++  
Sbjct: 790 KLGFEEFKYLWNNIKKWQGIYKRFETDRSGTIGSNELPGAF-EAAGFHLN-QHIYSMIIR 847

Query: 317 IDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 368
              +  G +DF  F++  + +  +              AF   D +  G I 
Sbjct: 848 RYSDETGNMDFDNFISCLVRLDAMFR------------AFRSLDKNGTGQIQ 887

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3 Length = 900

 Score = 42.8 bits (100), Expect = 2e-04
 Identities = 25/117 (21%), Positives = 46/117 (39%), Gaps = 22/117 (18%)

Query: 266 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR--------VLEILQAI 317
           + EE    R  F  +    +  +S  E+   L K +  +  + +           ++  +
Sbjct: 726 ESEEERQFRKLFVQLA-GDDMEVSATELMNILNKVV-TRHPDLKTDGFGIDTCRSMVAVM 783

Query: 318 DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRM 374
           D +T G + F EF    L       ++ +KW    Q  +++F+ DR G I   EL  
Sbjct: 784 DSDTTGKLGFEEF--KYLW------NNIKKW----QGIYKRFETDRSGTIGSNELPG 828

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ... Length = 279

 Score = 50.3 bits (121), Expect = 4e-07
 Identities = 28/111 (25%), Positives = 44/111 (39%), Gaps = 25/111 (22%)

Query: 85  HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV--------- 135
              +HRD++  N L     +  S K  DFGL+         + I  + Y           
Sbjct: 128 RNYIHRDLRAANILVS---DTLSCKIADFGLA---------RLIEDNEYTAREGAKFPIK 175

Query: 136 --APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRN 182
             APE +       +SDVWS G++   I+  GR P+   T   + + + R 
Sbjct: 176 WTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERG 226

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens} Length = 613

 Score = 51.1 bits (122), Expect = 4e-07
 Identities = 37/161 (22%), Positives = 55/161 (34%), Gaps = 40/161 (24%)

Query: 28  TRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH---L 84
              + +V+ +          GG L    L  K       + A ++ Q   V+        
Sbjct: 407 AEALMLVMEM--------AGGGPLHKF-LVGKREEIPVSNVAELLHQ---VSMGMKYLEE 454

Query: 85  HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV--------- 135
              VHR++   N L          K +DFGLS  +            +YY          
Sbjct: 455 KNFVHRNLAARNVL---LVNRHYAKISDFGLSKALG--------ADDSYYTARSAGKWPL 503

Query: 136 ---APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 171
              APE +  RK    SDVWS GV  +  L  G++P+    
Sbjct: 504 KWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMK 544

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A Length = 283

 Score = 50.3 bits (121), Expect = 4e-07
 Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 25/100 (25%)

Query: 85  HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV--------- 135
              +HRD+   N L     +   +K +DFGLS         + ++   Y           
Sbjct: 139 KQFLHRDLAARNCL---VNDQGVVKVSDFGLS---------RYVLDDEYTSSVGSKFPVR 186

Query: 136 --APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 171
              PEVL   K   +SD+W+ GV+ + I   G+ P+   T
Sbjct: 187 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT 226

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A* Length = 281

 Score = 50.3 bits (121), Expect = 4e-07
 Identities = 36/158 (22%), Positives = 52/158 (32%), Gaps = 40/158 (25%)

Query: 30  PMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH---LHG 86
           P  I++ L           GEL    L +  +        +   Q   +           
Sbjct: 86  PTWIIMEL--------YPYGELGHY-LERNKNSLKVLTLVLYSLQ---ICKAMAYLESIN 133

Query: 87  LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV----------- 135
            VHRD+   N L         +K  DFGLS         + I    YY            
Sbjct: 134 CVHRDIAVRNIL---VASPECVKLGDFGLS---------RYIEDEDYYKASVTRLPIKWM 181

Query: 136 APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 171
           +PE +  R+    SDVW   V  + IL  G++PF+   
Sbjct: 182 SPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLE 219

>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 110

 Score = 47.1 bits (112), Expect = 5e-07
 Identities = 17/70 (24%), Positives = 29/70 (41%), Gaps = 3/70 (4%)

Query: 264 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 323
            + +E+     +QF ++  D +  IS    +    K    KL    +  I +  D + DG
Sbjct: 15  RITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTK---SKLSIPELSYIWELSDADCDG 71

Query: 324 LVDFSEFVAA 333
            +   EF AA
Sbjct: 72  ALTLPEFCAA 81

>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6 Length = 110

 Score = 44.7 bits (106), Expect = 4e-06
 Identities = 13/56 (23%), Positives = 21/56 (37%), Gaps = 4/56 (7%)

Query: 351 RSQAAFEKFDIDRDGFITPEELR---MHTGL-KGSIDPLLEEADIDKDGRISLSEF 402
                F     D   FI+    +     + L    +  + E +D D DG ++L EF
Sbjct: 23  YYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIWELSDADCDGALTLPEF 78

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ... Length = 373

 Score = 50.4 bits (121), Expect = 5e-07
 Identities = 39/146 (26%), Positives = 62/146 (42%), Gaps = 36/146 (24%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENF 97
             E G L    L K D+++T       V Q++ +         +L   G VHRD+   N 
Sbjct: 127 YMENGSLDS-FLRKHDAQFT-------VIQLVGMLRGIASGMKYLSDMGYVHRDLAARNI 178

Query: 98  LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV----------APEVLK-RKSGP 146
           L      +   K +DFGL   +      +D   +AY            +PE +  RK   
Sbjct: 179 L---INSNLVCKVSDFGLGRVL------EDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTS 229

Query: 147 ESDVWSIGVITY-ILLCGRRPFWDKT 171
            SDVWS G++ + ++  G RP+W+ +
Sbjct: 230 ASDVWSYGIVLWEVMSYGERPYWEMS 255

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 50.5 bits (121), Expect = 6e-07
 Identities = 25/100 (25%), Positives = 38/100 (38%), Gaps = 25/100 (25%)

Query: 85  HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV--------- 135
              +HRD++  N L          K  DFGL+         + I  + Y           
Sbjct: 303 RNYIHRDLRAANILVS---ASLVCKIADFGLA---------RVIEDNEYTAREGAKFPIK 350

Query: 136 --APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 171
             APE +       +SDVWS G++   I+  GR P+   +
Sbjct: 351 WTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS 390

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A* Length = 325

 Score = 49.6 bits (119), Expect = 8e-07
 Identities = 33/164 (20%), Positives = 59/164 (35%), Gaps = 47/164 (28%)

Query: 28  TRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE-----C 82
              +++V              G LLD +   + +        +  + +L    +      
Sbjct: 86  GSSLQLVTQY--------LPLGSLLDHVRQHRGA--------LGPQLLLNWGVQIAKGMY 129

Query: 83  HL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV----- 135
           +L  HG+VHR++   N L    K  S ++  DFG++D + P             +     
Sbjct: 130 YLEEHGMVHRNLAARNVL---LKSPSQVQVADFGVADLLPPD--------DKQLLYSEAK 178

Query: 136 ------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 171
                 A E +   K   +SDVWS GV  + ++  G  P+    
Sbjct: 179 TPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLR 222

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 49.8 bits (119), Expect = 1e-06
 Identities = 28/110 (25%), Positives = 42/110 (38%), Gaps = 25/110 (22%)

Query: 85  HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV--------- 135
              VHRD++  N L     E+   K  DFGL+         + I  + Y           
Sbjct: 299 MNYVHRDLRAANIL---VGENLVCKVADFGLA---------RLIEDNEYTARQGAKFPIK 346

Query: 136 --APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLR 181
             APE     +   +SDVWS G++   +   GR P+       +  +V R
Sbjct: 347 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 396

>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} Length = 111

 Score = 46.3 bits (110), Expect = 1e-06
 Identities = 14/70 (20%), Positives = 29/70 (41%), Gaps = 3/70 (4%)

Query: 264 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 323
            +        R  F++ D   +G ++  + R  L +     L ++++  I    D + DG
Sbjct: 7   AVPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQ---SSLPQAQLASIWNLSDIDQDG 63

Query: 324 LVDFSEFVAA 333
            +   EF+ A
Sbjct: 64  KLTAEEFILA 73

>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens} Length = 111

 Score = 45.1 bits (107), Expect = 3e-06
 Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 4/56 (7%)

Query: 351 RSQAAFEKFDIDRDGFITPEELR---MHTGL-KGSIDPLLEEADIDKDGRISLSEF 402
           + +  F   D    G +T  + R   M + L +  +  +   +DID+DG+++  EF
Sbjct: 15  KYRQLFNSHDKTMSGHLTGPQARTILMQSSLPQAQLASIWNLSDIDQDGKLTAEEF 70

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens} Length = 325

 Score = 49.2 bits (118), Expect = 1e-06
 Identities = 44/173 (25%), Positives = 65/173 (37%), Gaps = 50/173 (28%)

Query: 29  RPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE-----CH 83
           R   IV            E G L    L   D ++T       + Q++ +         +
Sbjct: 123 RLAMIVTEY--------MENGSLDT-FLRTHDGQFT-------IMQLVGMLRGVGAGMRY 166

Query: 84  L--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------ 135
           L   G VHRD+   N L      +   K +DFGLS  ++           A Y       
Sbjct: 167 LSDLGYVHRDLAARNVL---VDSNLVCKVSDFGLSRVLEDDP-------DAAYTTTGGKI 216

Query: 136 -----APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLR 181
                APE +  R     SDVWS GV+ + +L  G RP+W+ T     ++V+ 
Sbjct: 217 PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTN----RDVIS 265

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 49.5 bits (118), Expect = 1e-06
 Identities = 28/110 (25%), Positives = 42/110 (38%), Gaps = 25/110 (22%)

Query: 85  HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV--------- 135
              VHRD++  N L     E+   K  DFGL+         + I  + Y           
Sbjct: 382 MNYVHRDLRAANIL---VGENLVCKVADFGLA---------RLIEDNEYTARQGAKFPIK 429

Query: 136 --APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLR 181
             APE     +   +SDVWS G++   +   GR P+       +  +V R
Sbjct: 430 WTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVER 479

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A* Length = 313

 Score = 48.8 bits (117), Expect = 1e-06
 Identities = 33/158 (20%), Positives = 58/158 (36%), Gaps = 36/158 (22%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPENF 97
             + G+L   +     SR       + ++ +L+   +      +L     +HRD+   N 
Sbjct: 122 FMKYGDLHTYL---LYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNC 178

Query: 98  LFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKS 144
           +    ++D ++   DFGLS         + I    YY             A E L  R  
Sbjct: 179 M---LRDDMTVCVADFGLS---------KKIYSGDYYRQGRIAKMPVKWIAIESLADRVY 226

Query: 145 GPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLR 181
             +SDVW+ GV  + I   G  P+       ++  +L 
Sbjct: 227 TSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLH 264

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A* Length = 291

 Score = 48.4 bits (116), Expect = 2e-06
 Identities = 27/101 (26%), Positives = 38/101 (37%), Gaps = 25/101 (24%)

Query: 85  HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV--------- 135
              VHRD+   N L          K +DFGLS  ++            YY          
Sbjct: 136 SNFVHRDLAARNVL---LVTQHYAKISDFGLSKALR--------ADENYYKAQTHGKWPV 184

Query: 136 ---APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 171
              APE +   K   +SDVWS GV+ +     G++P+    
Sbjct: 185 KWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMK 225

>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A Length = 92

 Score = 44.7 bits (106), Expect = 2e-06
 Identities = 10/54 (18%), Positives = 30/54 (55%), Gaps = 1/54 (1%)

Query: 279 AIDVDKNGSISLEEMRQALAKDLPWKLKESRVL-EILQAIDCNTDGLVDFSEFV 331
           +       ++S +E+++ + K+L     +   + ++++++D N+D  +DF E+ 
Sbjct: 20  SGREGSKLTLSRKELKELIKKELCLGEMKESSIDDLMKSLDKNSDQEIDFKEYS 73

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3tl8_A* Length = 326

 Score = 48.0 bits (115), Expect = 3e-06
 Identities = 28/92 (30%), Positives = 44/92 (47%), Gaps = 11/92 (11%)

Query: 81  ECHLHGLVHRDMKPENFLFKSAKEDSSLKA--TDFGLSDFIKPGKK--FQDIVGSAYYVA 136
            C    ++HRD+K  N L      D   +A   DFGL+  +          + G+  ++A
Sbjct: 150 HCDPK-IIHRDVKAANILL-----DEEFEAVVGDFGLAKLMDYKDTHVTTAVRGTIGHIA 203

Query: 137 PEVLKR-KSGPESDVWSIGVITYILLCGRRPF 167
           PE L   KS  ++DV+  GV+   L+ G+R F
Sbjct: 204 PEYLSTGKSSEKTDVFGYGVMLLELITGQRAF 235

>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A Length = 100

 Score = 44.4 bits (105), Expect = 3e-06
 Identities = 14/60 (23%), Positives = 27/60 (45%), Gaps = 4/60 (6%)

Query: 276 QFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDGLVDFSEFV 331
           ++ +        IS    R+ L K+L   L ++       +++Q +D N DG + F E+ 
Sbjct: 19  KYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYW 78

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A* Length = 321

 Score = 47.6 bits (114), Expect = 4e-06
 Identities = 30/101 (29%), Positives = 44/101 (43%), Gaps = 33/101 (32%)

Query: 84  LH--GLVHRDMKPENFLFKSAKEDSSLKA--TDFGLSDFIKPGKKFQD---------IVG 130
           LH   ++HRD+K  N L      D +     TDFG+S      KK  +         + G
Sbjct: 155 LHTRAIIHRDVKSINILL-----DENFVPKITDFGIS------KKGTELDQTHLSTVVKG 203

Query: 131 SAYYVAPEVLKR-----KSGPESDVWSIGVITYILLCGRRP 166
           +  Y+ PE   +     KS    DV+S GV+ + +LC R  
Sbjct: 204 TLGYIDPEYFIKGRLTEKS----DVYSFGVVLFEVLCARSA 240

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 3pjc_A* 1yvj_A* Length = 327

 Score = 47.3 bits (113), Expect = 4e-06
 Identities = 34/145 (23%), Positives = 49/145 (33%), Gaps = 32/145 (22%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC---HLHGLVHRDMKPENFLFKS 101
               G L D  L +  +R       +   Q   +            VHRD+   N L   
Sbjct: 107 YLPSGCLRDF-LQRHRARLDASRLLLYSSQ---ICKGMEYLGSRRCVHRDLAARNIL--- 159

Query: 102 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RKSGPES 148
            + ++ +K  DFGL+  +   K         YYV            APE L       +S
Sbjct: 160 VESEAHVKIADFGLAKLLPLDKD--------YYVVREPGQSPIFWYAPESLSDNIFSRQS 211

Query: 149 DVWSIGVITY-ILLCGRRPFWDKTE 172
           DVWS GV+ Y +     +      E
Sbjct: 212 DVWSFGVVLYELFTYCDKSCSPSAE 236

>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A Length = 106

 Score = 44.0 bits (104), Expect = 6e-06
 Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 2/57 (3%)

Query: 276 QFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVL-EILQAIDCNTDGLVDFSEFV 331
            F   +  K  S+S+ E ++ + + LP  LK+   L E ++++D N D  + F+E+ 
Sbjct: 30  TFARQEGRK-DSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYW 85

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens} Length = 352

 Score = 47.0 bits (112), Expect = 6e-06
 Identities = 23/118 (19%), Positives = 43/118 (36%), Gaps = 19/118 (16%)

Query: 64  TEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKPG 122
           +E+    V  ++L      H +  VH ++  EN       + S +    +G +  +   G
Sbjct: 157 SERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQ-SQVTLAGYGFAFRYCPSG 215

Query: 123 K-------KFQDIVGSAYYVAPEVLKRKSGPE----SDVWSIG-VITYILLCGRRPFW 168
           K             G   +++ ++ K   G      SD+ S+G  +    L G  P W
Sbjct: 216 KHVAYVEGSRSPHEGDLEFISMDLHK---GCGPSRRSDLQSLGYCMLK-WLYGFLP-W 268

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ... Length = 288

 Score = 46.5 bits (111), Expect = 7e-06
 Identities = 28/110 (25%), Positives = 43/110 (39%), Gaps = 25/110 (22%)

Query: 85  HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV--------- 135
              +HRD+   N L     E+  +K  DFGLS  +          G  Y           
Sbjct: 130 KNFIHRDLAARNCL---VGENHLVKVADFGLSRLMT---------GDTYTAHAGAKFPIK 177

Query: 136 --APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLR 181
             APE L   K   +SDVW+ GV+ + I   G  P+       +++ + +
Sbjct: 178 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEK 227

>1a4p_A S100A10; S100 family, EF-hand protein, ligand of annexin II, calcium/phospholipid binding protein, calcium-phospholipid protein complex; 2.25A {Homo sapiens} SCOP: a.39.1.2 PDB: 1bt6_A Length = 96

 Score = 43.6 bits (103), Expect = 7e-06
 Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 5/66 (7%)

Query: 270 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDGLV 325
           +  +   F     DK G ++ E++R  + K+ P  L+  +    V +I++ +D   DG V
Sbjct: 8   METMMFTFHKFAGDK-GYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKV 66

Query: 326 DFSEFV 331
            F  F 
Sbjct: 67  GFQSFF 72

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 47.0 bits (112), Expect = 8e-06
 Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 21/96 (21%)

Query: 85  HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV-------AP 137
           +  VHRD+   N L     ED+  K +DFGL+         ++   +           AP
Sbjct: 308 NNFVHRDLAARNVLVS---EDNVAKVSDFGLT---------KEASSTQDTGKLPVKWTAP 355

Query: 138 EVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 171
           E L+ +K   +SDVWS G++ + I   GR P+    
Sbjct: 356 EALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 391

>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L Length = 714

 Score = 47.1 bits (111), Expect = 8e-06
 Identities = 22/99 (22%), Positives = 49/99 (49%), Gaps = 14/99 (14%)

Query: 270 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSE 329
           +   +  +  IDVD++G+++  EMR+AL ++  +KL   ++ +++ A   + + ++DF  
Sbjct: 604 IQKYQKIYREIDVDRSGTMNSYEMRKAL-EEAGFKLP-CQLHQVIVARFADDELIIDFDN 661

Query: 330 FVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 368
           FV   + +  L +             F++ D +  G I 
Sbjct: 662 FVRCLVRLEILFK------------IFKQLDPENTGTIQ 688

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 46.7 bits (111), Expect = 9e-06
 Identities = 27/111 (24%), Positives = 45/111 (40%), Gaps = 25/111 (22%)

Query: 85  HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV--------- 135
              +HR++   N L     E+  +K  DFGLS         + + G  Y           
Sbjct: 337 KNFIHRNLAARNCLVG---ENHLVKVADFGLS---------RLMTGDTYTAHAGAKFPIK 384

Query: 136 --APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRN 182
             APE L   K   +SDVW+ GV+ + I   G  P+       +++ + ++
Sbjct: 385 WTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKD 435

>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens} Length = 104

 Score = 42.9 bits (101), Expect = 1e-05
 Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 6/68 (8%)

Query: 270 LADLRDQFD--AIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDG 323
           L  +   F   +        ++  E+++ L ++LP  L +        +++  +D N D 
Sbjct: 12  LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDN 71

Query: 324 LVDFSEFV 331
            VDF E+ 
Sbjct: 72  EVDFQEYC 79

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 3q6w_A* 3r7o_A* 3q6u_A* 3cth_A* 3ce3_A* 3ctj_A* ... Length = 298

 Score = 45.7 bits (109), Expect = 1e-05
 Identities = 43/181 (23%), Positives = 72/181 (39%), Gaps = 43/181 (23%)

Query: 18  VNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 77
           ++L+   L       +VLP          + G+L +  +  +    T KD   ++   L+
Sbjct: 89  LSLLGICLRSEGSPLVVLPY--------MKHGDLRN-FIRNETHNPTVKD---LIGFGLQ 136

Query: 78  VAAEC-HL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 134
           VA    +L     VHRD+   N +     E  ++K  DFGL+         +D+    YY
Sbjct: 137 VAKGMKYLASKKFVHRDLAARNCM---LDEKFTVKVADFGLA---------RDMYDKEYY 184

Query: 135 V--------------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKE 178
                          A E L+ +K   +SDVWS GV+ + ++  G  P+ D     I   
Sbjct: 185 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 244

Query: 179 V 179
           +
Sbjct: 245 L 245

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ... Length = 322

 Score = 46.1 bits (110), Expect = 1e-05
 Identities = 36/149 (24%), Positives = 61/149 (40%), Gaps = 34/149 (22%)

Query: 45  LCEGGELLDRILAKK-DSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDMKPEN 96
           L   G+L   + + +         A   + +M+++A E      +L  +  VHRD+   N
Sbjct: 109 LMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARN 168

Query: 97  FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------------APEVLK-RK 143
            +     ED ++K  DFG++         +DI  + YY             +PE LK   
Sbjct: 169 CM---VAEDFTVKIGDFGMT---------RDIYETDYYRKGGKGLLPVRWMSPESLKDGV 216

Query: 144 SGPESDVWSIGVITY-ILLCGRRPFWDKT 171
               SDVWS GV+ + I     +P+   +
Sbjct: 217 FTTYSDVWSFGVVLWEIATLAEQPYQGLS 245

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A* Length = 333

 Score = 45.7 bits (109), Expect = 1e-05
 Identities = 30/136 (22%), Positives = 51/136 (37%), Gaps = 37/136 (27%)

Query: 45  LCEGGELLD-----RILAKKDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDM 92
            C  G+LL+       + + D  +   ++    R +L  +++       L     +HRD+
Sbjct: 131 YCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDV 190

Query: 93  KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------------APEVL 140
              N L          K  DFGL+         +DI+  + Y+            APE +
Sbjct: 191 AARNVL---LTNGHVAKIGDFGLA---------RDIMNDSNYIVKGNARLPVKWMAPESI 238

Query: 141 K-RKSGPESDVWSIGV 155
                  +SDVWS G+
Sbjct: 239 FDCVYTVQSDVWSYGI 254

>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A* Length = 93

 Score = 42.5 bits (100), Expect = 1e-05
 Identities = 14/68 (20%), Positives = 29/68 (42%), Gaps = 6/68 (8%)

Query: 270 LADLRDQFD--AIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDG 323
           L  +   F   +        ++  E+++ L ++LP  L +        +++  +D N D 
Sbjct: 9   LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDN 68

Query: 324 LVDFSEFV 331
            VDF E+ 
Sbjct: 69  EVDFQEYC 76

>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7 Length = 103

 Score = 43.0 bits (101), Expect = 1e-05
 Identities = 14/87 (16%), Positives = 34/87 (39%), Gaps = 24/87 (27%)

Query: 338 HQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEEL-----RMHTGLKGSIDP-------- 384
            +L+  D  +++ ++   F   DI+ DG +  +EL     +    +    +         
Sbjct: 10  EELDGLDPNRFNPKT--FFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREME 67

Query: 385 ---------LLEEADIDKDGRISLSEF 402
                    +++  D ++D  ++L EF
Sbjct: 68  EERLRMREHVMKNVDTNQDRLVTLEEF 94

>1snl_A Nucleobindin 1, calnuc; EF-hand, calcium-binding, metal binding protein; NMR {Homo sapiens} SCOP: a.39.1.7 Length = 103

 Score = 42.6 bits (100), Expect = 2e-05
 Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 16/85 (18%)

Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDL------------PWKLKESR--- 309
           LD     + +  F   D++ +G +  +E+     K+L              +++E R   
Sbjct: 15  LDPNRF-NPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRM 73

Query: 310 VLEILQAIDCNTDGLVDFSEFVAAT 334
              +++ +D N D LV   EF+A+T
Sbjct: 74  REHVMKNVDTNQDRLVTLEEFLAST 98

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens} Length = 329

 Score = 45.8 bits (109), Expect = 2e-05
 Identities = 37/154 (24%), Positives = 58/154 (37%), Gaps = 39/154 (25%)

Query: 45  LCEGGELLD------RILAKKDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRD 91
               G+L                        + + Q+L VA++      +L     VHRD
Sbjct: 124 YMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRD 183

Query: 92  MKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------------APEV 139
           +   N L     +   +K  DFG+S         +DI  + YY              PE 
Sbjct: 184 LATRNCL---VGQGLVVKIGDFGMS---------RDIYSTDYYRVGGRTMLPIRWMPPES 231

Query: 140 LK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 171
           +  RK   ESDVWS GV+ + I   G++P++  +
Sbjct: 232 ILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS 265

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7 Length = 373

 Score = 45.5 bits (108), Expect = 2e-05
 Identities = 41/181 (22%), Positives = 70/181 (38%), Gaps = 43/181 (23%)

Query: 18  VNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLR 77
           ++L+   L       +VLP          + G+L +  +  +    T KD   ++   L+
Sbjct: 153 LSLLGICLRSEGSPLVVLPY--------MKHGDLRN-FIRNETHNPTVKD---LIGFGLQ 200

Query: 78  VAAEC-HL--HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYY 134
           VA     L     VHRD+   N +     E  ++K  DFGL+         +D+    + 
Sbjct: 201 VAKGMKFLASKKFVHRDLAARNCM---LDEKFTVKVADFGLA---------RDMYDKEFD 248

Query: 135 V--------------APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKE 178
                          A E L+ +K   +SDVWS GV+ + ++  G  P+ D     I   
Sbjct: 249 SVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVY 308

Query: 179 V 179
           +
Sbjct: 309 L 309

>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A Length = 113

 Score = 42.6 bits (100), Expect = 2e-05
 Identities = 14/75 (18%), Positives = 32/75 (42%), Gaps = 6/75 (8%)

Query: 263 STLDDEELADLRDQFD--AIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQA 316
           +   ++ L  +   F   +        ++  E+++ L ++LP  L +        +++  
Sbjct: 14  ACPLEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSN 73

Query: 317 IDCNTDGLVDFSEFV 331
           +D N D  VDF E+ 
Sbjct: 74  LDSNRDNEVDFQEYC 88

>3zzw_A Tyrosine-protein kinase transmembrane receptor RO; transferase, neurotrophic tyrosine kinase, receptor-related NTRKR2; 2.90A {Homo sapiens} Length = 289

 Score = 44.9 bits (107), Expect = 3e-05
 Identities = 30/155 (19%), Positives = 58/155 (37%), Gaps = 40/155 (25%)

Query: 45  LCEGGELLD-------RILAKKDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHR 90
            C  G+L +                     +A+     + + A+      +L  H +VH+
Sbjct: 93  YCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHK 152

Query: 91  DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------------APE 138
           D+   N L     +  ++K +D GL          +++  + YY             APE
Sbjct: 153 DLATRNVL---VYDKLNVKISDLGLF---------REVYAADYYKLLGNSLLPIRWMAPE 200

Query: 139 VLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 171
            +   K   +SD+WS GV+ + +   G +P+   +
Sbjct: 201 AIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYS 235

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} Length = 174

 Score = 43.4 bits (102), Expect = 3e-05
 Identities = 18/144 (12%), Positives = 38/144 (26%), Gaps = 28/144 (19%)

Query: 273 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR-----VLEILQAIDCNTDGLVDF 327
                  + V +   I   +++  L ++L                ++  ++   +G +D 
Sbjct: 7   HHHHSSGL-VPRGSDIDATQLQGLLNQELLTGPPGDMFSLDECRSLVALMELKVNGRLDQ 65

Query: 328 SEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDP--- 384
            EF                 +    Q  F+K      G +   +L         +     
Sbjct: 66  EEFARLW--------KRLVHY----QHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFI 112

Query: 385 ------LLEEADIDKDGRISLSEF 402
                 L+     D  GR+S    
Sbjct: 113 SRELLHLVTLRYSDSVGRVSFPSL 136

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens} Length = 174

 Score = 41.5 bits (97), Expect = 2e-04
 Identities = 12/103 (11%), Positives = 29/103 (28%), Gaps = 17/103 (16%)

Query: 272 DLRDQFDAIDVDKNGSISLEEMRQALA---KDLPWKLKESRVLEILQAIDCNTDGLVDFS 328
             +  F  +     G +   ++ +A+          +    +L ++     ++ G V F 
Sbjct: 77  HYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISR-ELLHLVTLRYSDSVGRVSFP 134

Query: 329 EFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE 371
             V   + +  + +             F     D  G    E 
Sbjct: 135 SLVCFLMRLEAMAK------------TFRNLSKDGKGLYLTEM 165

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} Length = 298

 Score = 44.6 bits (106), Expect = 3e-05
 Identities = 38/156 (24%), Positives = 61/156 (39%), Gaps = 35/156 (22%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC-HL--HGLVHRDMKPENFLFKS 101
               G+LL   +       T KD   ++   L+VA    +L     VHRD+   N +   
Sbjct: 104 YMCHGDLLQ-FIRSPQRNPTVKD---LISFGLQVARGMEYLAEQKFVHRDLAARNCM--- 156

Query: 102 AKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV--------------APEVLK-RKSGP 146
             E  ++K  DFGL+         +DI+   YY               A E L+  +   
Sbjct: 157 LDESFTVKVADFGLA---------RDILDREYYSVQQHRHARLPVKWTALESLQTYRFTT 207

Query: 147 ESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLR 181
           +SDVWS GV+ + +L  G  P+       +   + +
Sbjct: 208 KSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQ 243

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A* Length = 278

 Score = 44.5 bits (106), Expect = 3e-05
 Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 19/95 (20%)

Query: 85  HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI---KPGKKFQDIVGSAYYV---APE 138
           +  VHRD+   N L     ED+  K +DFGL+      +   K          V   APE
Sbjct: 136 NNFVHRDLAARNVLVS---EDNVAKVSDFGLTKEASSTQDTGKLP--------VKWTAPE 184

Query: 139 VLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 171
            L+ +K   +SDVWS G++ + I   GR P+    
Sbjct: 185 ALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 219

>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 Length = 99

 Score = 41.3 bits (97), Expect = 4e-05
 Identities = 12/73 (16%), Positives = 24/73 (32%), Gaps = 3/73 (4%)

Query: 261 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 320
           L+ T            +  ++    G +   +    L K     L +  + +I    D +
Sbjct: 1   LSLTQLSSGNPVYEKYYRQVEAGNTGRVLALDAAAFLKK---SGLPDLILGKIWDLADTD 57

Query: 321 TDGLVDFSEFVAA 333
             G++   EF  A
Sbjct: 58  GKGVLSKQEFFVA 70

>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6 Length = 99

 Score = 40.6 bits (95), Expect = 9e-05
 Identities = 14/73 (19%), Positives = 28/73 (38%), Gaps = 4/73 (5%)

Query: 353 QAAFEKFDIDRDGFITPEELR---MHTGL-KGSIDPLLEEADIDKDGRISLSEFRRLLRT 408
           +  + + +    G +   +       +GL    +  + + AD D  G +S  EF   LR 
Sbjct: 14  EKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILGKIWDLADTDGKGVLSKQEFFVALRL 73

Query: 409 ASISSRNVPPSPS 421
            + +   +  S S
Sbjct: 74  VACAQNGLEVSLS 86

>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A Length = 95

 Score = 41.3 bits (97), Expect = 5e-05
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 4/57 (7%)

Query: 279 AIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDGLVDFSEFV 331
           ++      ++S  E++Q L K+L   +K  +    + EI Q +D N D  VDF EF+
Sbjct: 22  SVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFI 78

>3v5q_A NT-3 growth factor receptor; kinase domain, kinase, phosphorylation, transferase-transfer inhibitor complex; HET: 0F4; 2.20A {Homo sapiens} Length = 297

 Score = 44.1 bits (105), Expect = 5e-05
 Identities = 38/155 (24%), Positives = 63/155 (40%), Gaps = 40/155 (25%)

Query: 45  LCEGGELLD-------RILAKKDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHR 90
             + G+L           +   D +  +    + + QML +A++      +L     VHR
Sbjct: 98  YMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHR 157

Query: 91  DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------------APE 138
           D+   N L      +  +K  DFG+S         +D+  + YY              PE
Sbjct: 158 DLATRNCL---VGANLLVKIGDFGMS---------RDVYSTDYYRVGGHTMLPIRWMPPE 205

Query: 139 VLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 171
            +  RK   ESDVWS GVI + I   G++P++  +
Sbjct: 206 SIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLS 240

>1k2h_A S100A1, S-100 protein, alpha chain; non-covalent homodimer, X-type four-helix bundle, metal binding protein; NMR {Rattus norvegicus} SCOP: a.39.1.2 PDB: 1zfs_A 2k2f_A 2kbm_A 2l0p_A 2jpt_A Length = 93

 Score = 40.9 bits (96), Expect = 5e-05
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 6/68 (8%)

Query: 270 LADLRDQFD--AIDVDKNGSISLEEMRQALAKDLPWKLK----ESRVLEILQAIDCNTDG 323
           +  L + F   +        +S +E++  L  +L   L        V +I++ +D N DG
Sbjct: 8   METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDG 67

Query: 324 LVDFSEFV 331
            VDF EFV
Sbjct: 68  EVDFQEFV 75

>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ... Length = 92

 Score = 40.5 bits (95), Expect = 6e-05
 Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 5/60 (8%)

Query: 276 QFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDGLVDFSEFV 331
           Q+   + DK   +   E+++ +  +L   L+E +    V ++++ +D N DG  DF EF+
Sbjct: 17  QYSGREGDK-HKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFM 75

>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A Length = 624

 Score = 44.5 bits (104), Expect = 6e-05
 Identities = 13/105 (12%), Positives = 37/105 (35%), Gaps = 7/105 (6%)

Query: 265 LDDEELAD--LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 322
           +D  +     +       D +K+  ++ +E++    K+L  ++ +    +I +  D +  
Sbjct: 3   MDQRQKLQHWIHSCLRKADKNKDNKMNFKELKD-FLKELNIQVDDGYARKIFRECDHSQT 61

Query: 323 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFI 367
             ++  E          L    +E      +AA     +  +  +
Sbjct: 62  DSLEDEEIETF---YKML-TQRAEIDRAFEEAAGSAETLSVERLV 102

>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A Length = 95

 Score = 41.0 bits (96), Expect = 6e-05
 Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 4/57 (7%)

Query: 279 AIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDGLVDFSEFV 331
           +       +++  E++  + K+LP  L+  +    V ++L+ +D N D  VDFSEF+
Sbjct: 19  SGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFI 75

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7 Length = 343

 Score = 43.8 bits (104), Expect = 6e-05
 Identities = 35/153 (22%), Positives = 58/153 (37%), Gaps = 33/153 (21%)

Query: 40  LRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLVHRDM 92
           LR +       L    L+ +    +     +   + L +A +      +L     VHRD+
Sbjct: 141 LRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDL 200

Query: 93  KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------------APEVL 140
              N L     E+  +K  DFGLS         ++I  + YY              PE +
Sbjct: 201 ATRNCL---VGENMVVKIADFGLS---------RNIYSADYYKADGNDAIPIRWMPPESI 248

Query: 141 K-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 171
              +   ESDVW+ GV+ + I   G +P++   
Sbjct: 249 FYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMA 281

>1qls_A S100C protein, calgizzarin; metal-binding protein/inhibitor, S100 family, EF-hand protein, complex (ligand/annexin), ligand of annexin II; 2.3A {Sus scrofa} SCOP: a.39.1.2 PDB: 1nsh_A Length = 99

 Score = 40.6 bits (95), Expect = 8e-05
 Identities = 15/68 (22%), Positives = 29/68 (42%), Gaps = 6/68 (8%)

Query: 270 LADLRDQFD--AIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDG 323
           +  L   F   A     N  IS  E    +  +L    +  +    +  +++ +D ++DG
Sbjct: 12  IESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDG 71

Query: 324 LVDFSEFV 331
            +DF EF+
Sbjct: 72  QLDFQEFL 79

>1k8u_A S100A6, calcyclin, CACY; calcium regulatory protein, calcium free, signaling protein; HET: MSE; 1.15A {Homo sapiens} SCOP: a.39.1.2 PDB: 1k96_A 1k9k_A 1k9p_A 1a03_A 1cnp_A 1jwd_A 2cnp_A 2jtt_A Length = 90

 Score = 39.8 bits (93), Expect = 1e-04
 Identities = 12/51 (23%), Positives = 29/51 (56%), Gaps = 2/51 (3%)

Query: 283 DKNGSISLEEMRQALAKDLPWKLK--ESRVLEILQAIDCNTDGLVDFSEFV 331
               ++S +E+++ + K+L    K  ++ +  +++ +D N D  V+F E+V
Sbjct: 24  GDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYV 74

>3fia_A Intersectin-1; EH 1 domain, NESG, structural genomics, PSI- 2, protein structure initiative, northeast structural genomics consortium; 1.45A {Homo sapiens} PDB: 2khn_A Length = 121

 Score = 40.6 bits (95), Expect = 1e-04
 Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 4/70 (5%)

Query: 264 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 323
            +  EE A    QF ++    +G I+ ++ R    +     L +  + +I    D N DG
Sbjct: 26  AITVEERAKHDQQFHSLK-PISGFITGDQARNFFFQ---SGLPQPVLAQIWALADMNNDG 81

Query: 324 LVDFSEFVAA 333
            +D  EF  A
Sbjct: 82  RMDQVEFSIA 91

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens} Length = 326

 Score = 42.7 bits (101), Expect = 1e-04
 Identities = 30/131 (22%), Positives = 40/131 (30%), Gaps = 42/131 (32%)

Query: 85  HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV--------- 135
              +HRD+   N L    + ++ +K  DFGL+  +   K+        YY          
Sbjct: 164 KRYIHRDLATRNIL---VENENRVKIGDFGLTKVLPQDKE--------YYKVKEPGESPI 212

Query: 136 ---APEVLK-RKSGPESDVWSIGV-----ITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 186
              APE L   K    SDVWS GV      TYI      P       G            
Sbjct: 213 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG------------ 260

Query: 187 RRKPWPSISNS 197
                  +   
Sbjct: 261 -NDKQGQMIVF 270

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A* Length = 313

 Score = 42.2 bits (100), Expect = 2e-04
 Identities = 33/152 (21%), Positives = 52/152 (34%), Gaps = 42/152 (27%)

Query: 45  LCEGGELLD---------RILAKKDSRYTEKDAAVVVRQMLRVAAE-----CHL--HGLV 88
            C  G+LL+                +   + + A+ +  +L  + +       L     +
Sbjct: 108 YCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCI 167

Query: 89  HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------------A 136
           HRD+   N L          K  DFGL+         +DI   + YV            A
Sbjct: 168 HRDLAARNIL---LTHGRITKICDFGLA---------RDIKNDSNYVVKGNARLPVKWMA 215

Query: 137 PEVLK-RKSGPESDVWSIGVITY-ILLCGRRP 166
           PE +       ESDVWS G+  + +   G  P
Sbjct: 216 PESIFNCVYTFESDVWSYGIFLWELFSLGSSP 247

>1nub_A Basement membrane protein BM-40; extracellular module, glycoprotein, anti-adhesive protein, C binding, site-directed mutagenesis; HET: NAG; 2.80A {Homo sapiens} SCOP: a.39.1.3 g.3.11.3 g.68.1.1 PDB: 2v53_A* 1bmo_A* Length = 229

 Score = 41.9 bits (97), Expect = 2e-04
 Identities = 14/69 (20%), Positives = 25/69 (36%), Gaps = 5/69 (7%)

Query: 341 EEHDSEKWHLRSQAAFEKFDIDR-DGFITPEELR----MHTGLKGSIDPLLEEADIDKDG 395
            E +   +       F + D    DG+++  EL         ++       E  D+D D 
Sbjct: 146 PEKNYNMYIFPVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDK 205

Query: 396 RISLSEFRR 404
            I+L E+  
Sbjct: 206 YIALDEWAG 214

>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group} Length = 179

 Score = 41.2 bits (96), Expect = 2e-04
 Identities = 25/175 (14%), Positives = 61/175 (34%), Gaps = 33/175 (18%)

Query: 258 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR--VLEILQ 315
           L+ + + + ++  A +  +F+ + VD  G +      + +       +  S    +++  
Sbjct: 15  LQFVTAKVGNDGWAAVEKRFNQLQVD--GVLLRSRFGKCI------GMDGSDEFAVQMFD 66

Query: 316 AID---CNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEEL 372
           ++         ++   E         QL +   +    R +  F+  D + DG +T EE+
Sbjct: 67  SLARKRGIVKQVLTKDELKDF---YEQLTDQGFDN---RLRTFFDMVDKNADGRLTAEEV 120

Query: 373 R--------------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISS 413
           +              +          ++EE D    G I + +   LL  +   +
Sbjct: 121 KEIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEMEDLEALLLQSPSEA 175

>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A Length = 101

 Score = 39.5 bits (92), Expect = 2e-04
 Identities = 15/60 (25%), Positives = 28/60 (46%), Gaps = 5/60 (8%)

Query: 276 QFDAIDVDKNGSISLEEMRQALAKDLPW----KLKESRVLEILQAIDCNTDGLVDFSEFV 331
           ++     DK   +   E+++ L K+L      + +E    + +  +D N D  VDF E+V
Sbjct: 18  EYAGRCGDKY-KLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYV 76

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 3q32_A* 3rvg_A* 3tjc_A* 3tjd_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* 3io7_A* 3kck_A* 3jy9_A* Length = 295

 Score = 41.9 bits (99), Expect = 2e-04
 Identities = 28/131 (21%), Positives = 40/131 (30%), Gaps = 42/131 (32%)

Query: 85  HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV--------- 135
              +HRD+   N L    + ++ +K  DFGL+  +   K+        ++          
Sbjct: 133 KRYIHRDLATRNIL---VENENRVKIGDFGLTKVLPQDKE--------FFKVKEPGESPI 181

Query: 136 ---APEVLK-RKSGPESDVWSIGV-----ITYILLCGRRPFWDKTEDGIFKEVLRNKPDF 186
              APE L   K    SDVWS GV      TYI      P       G            
Sbjct: 182 FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIG------------ 229

Query: 187 RRKPWPSISNS 197
                  +   
Sbjct: 230 -NDKQGQMIVF 239

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens} Length = 382

 Score = 42.4 bits (100), Expect = 2e-04
 Identities = 38/165 (23%), Positives = 60/165 (36%), Gaps = 40/165 (24%)

Query: 45  LCEGGELLD-------RILAKKDSRYTEKDAAVVVRQMLRVAAEC-----HL--HGLVHR 90
               G L +         L    +     +  +  + ++  A +      +L     +HR
Sbjct: 156 YASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHR 215

Query: 91  DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------------APE 138
           D+   N L     ED+ +K  DFGL+         +DI    YY             APE
Sbjct: 216 DLAARNVL---VTEDNVMKIADFGLA---------RDIHHIDYYKKTTNGRLPVKWMAPE 263

Query: 139 VLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLR 181
            L  R    +SDVWS GV+ + I   G  P+     + +FK +  
Sbjct: 264 ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKE 308

>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio} Length = 99

 Score = 39.4 bits (92), Expect = 2e-04
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 6/68 (8%)

Query: 270 LADLRDQFD--AIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDG 323
           +  L   F   +        +S  E+++ L  +L   L   +    V +I+  +D N D 
Sbjct: 9   MDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDN 68

Query: 324 LVDFSEFV 331
            VDF+EFV
Sbjct: 69  EVDFNEFV 76

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vid_A* 3hng_A* Length = 359

 Score = 41.8 bits (98), Expect = 3e-04
 Identities = 34/120 (28%), Positives = 47/120 (39%), Gaps = 31/120 (25%)

Query: 86  GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV---------- 135
             +HRD+   N L     E + +K  DFGL+         +DI     YV          
Sbjct: 213 KCIHRDLAARNILLS---EKNVVKICDFGLA---------RDIYKDPDYVRKGDARLPLK 260

Query: 136 --APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRN-----KPDF 186
             APE +  R    +SDVWS GV+ + I   G  P+     D  F   L+       PD+
Sbjct: 261 WMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDY 320

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 3eyg_A* 3eyh_A* Length = 302

 Score = 41.5 bits (98), Expect = 3e-04
 Identities = 28/102 (27%), Positives = 37/102 (36%), Gaps = 25/102 (24%)

Query: 85  HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV--------- 135
              VHRD+   N L    + +  +K  DFGL+  I+  K+        YY          
Sbjct: 145 RQYVHRDLAARNVL---VESEHQVKIGDFGLTKAIETDKE--------YYTVKDDRDSPV 193

Query: 136 ---APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTE 172
              APE L   K    SDVWS GV  + +L            
Sbjct: 194 FWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMAL 235

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ... Length = 316

 Score = 41.9 bits (99), Expect = 3e-04
 Identities = 37/165 (22%), Positives = 58/165 (35%), Gaps = 43/165 (26%)

Query: 45  LCEGGELLD-------RILAKKDSRYTEKDAAVVVRQMLRVAAEC-----HL--HGLVHR 90
            C+ G L           +  K +        + +  ++  + +       L     +HR
Sbjct: 113 FCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHR 172

Query: 91  DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------------APE 138
           D+   N L     E + +K  DFGL+         +DI     YV            APE
Sbjct: 173 DLAARNIL---LSEKNVVKICDFGLA---------RDIYKDPDYVRKGDARLPLKWMAPE 220

Query: 139 VLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLR 181
            +  R    +SDVWS GV+ + I   G  P+     D   +E  R
Sbjct: 221 TIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID---EEFCR 262

>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A* Length = 113

 Score = 39.1 bits (91), Expect = 3e-04
 Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 5/58 (8%)

Query: 279 AIDVDKNGSISLEEMRQALAKDLPWKLK-----ESRVLEILQAIDCNTDGLVDFSEFV 331
           ++ +    +++  E ++ + KDL   LK     E  +  I++ +D N D  + F EF+
Sbjct: 22  SVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFI 79

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A* Length = 327

 Score = 41.5 bits (98), Expect = 4e-04
 Identities = 38/155 (24%), Positives = 54/155 (34%), Gaps = 43/155 (27%)

Query: 45  LCEGGELLD-------RILAKKDSRYTEKDAAVVVRQMLRVAAEC-----HL--HGLVHR 90
               G LLD              +      + +  +Q+L  AA+      +L     +HR
Sbjct: 107 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHR 166

Query: 91  DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------------APE 138
           D+   N L     E+   K  DFGLS       + Q+      YV            A E
Sbjct: 167 DLAARNIL---VGENYVAKIADFGLS-------RGQE-----VYVKKTMGRLPVRWMAIE 211

Query: 139 VLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKT 171
            L        SDVWS GV+ + I+  G  P+   T
Sbjct: 212 SLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMT 246

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* Length = 318

 Score = 41.2 bits (97), Expect = 4e-04
 Identities = 30/127 (23%), Positives = 41/127 (32%), Gaps = 35/127 (27%)

Query: 85  HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV--------- 135
              +HRD+   N L      D  +K  DFGL+  +  G +        YY          
Sbjct: 153 QHYIHRDLAARNVL---LDNDRLVKIGDFGLAKAVPEGHE--------YYRVREDGDSPV 201

Query: 136 ---APEVLK-RKSGPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP 190
              APE LK  K    SDVWS GV  Y +L          T+      +           
Sbjct: 202 FWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGI----------A 251

Query: 191 WPSISNS 197
              ++  
Sbjct: 252 QGQMTVL 258

>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A Length = 106

 Score = 38.2 bits (89), Expect = 5e-04
 Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 4/76 (5%)

Query: 264 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 323
            +  E+ A     FD++    NG +S ++++  L      KL    +  + +  D + DG
Sbjct: 8   AVKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLN---SKLPVDILGRVWELSDIDHDG 63

Query: 324 LVDFSEFVAATLHVHQ 339
           ++D  EF  A   V+ 
Sbjct: 64  MLDRDEFAVAMFLVYC 79

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A* Length = 314

 Score = 40.3 bits (95), Expect = 7e-04
 Identities = 36/136 (26%), Positives = 49/136 (36%), Gaps = 32/136 (23%)

Query: 40  LRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAEC-----HL--HGLVHRDM 92
           LR  R    G L         S     + A+ +  ++  A +      +L    LVHRD+
Sbjct: 117 LRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDL 176

Query: 93  KPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYV------------APEVL 140
              N L     E   +K +DFGLS         +D+     YV            A E L
Sbjct: 177 AARNIL---VAEGRKMKISDFGLS---------RDVYEEDSYVKRSQGRIPVKWMAIESL 224

Query: 141 K-RKSGPESDVWSIGV 155
                  +SDVWS GV
Sbjct: 225 FDHIYTTQSDVWSFGV 240

>1psr_A Psoriasin, S100A7; EF-hand protein, MAD phasing, psoriasis, S100 protein family; 1.05A {Homo sapiens} SCOP: a.39.1.2 PDB: 2psr_A 2wor_A* 2wos_A* 3psr_A 2wnd_A Length = 100

 Score = 37.8 bits (88), Expect = 8e-04
 Identities = 11/55 (20%), Positives = 23/55 (41%), Gaps = 6/55 (10%)

Query: 283 DKNGSISLEEMRQALAKDLPWKLKESR------VLEILQAIDCNTDGLVDFSEFV 331
            ++  I    +   + ++ P  L          + ++ +  D N D  +DFSEF+
Sbjct: 21  RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFL 75

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	429
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	100.0
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	100.0
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	100.0
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	100.0
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	100.0
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	100.0
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	100.0
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	100.0
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	100.0
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	100.0
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	100.0
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	100.0
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	100.0
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	100.0
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	100.0
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	100.0
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	100.0
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	100.0
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	100.0
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	100.0
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	100.0
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	100.0
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	100.0
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	100.0
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	100.0
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	100.0
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	100.0
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	100.0
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	100.0
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	100.0
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	100.0
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	100.0
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	100.0
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	100.0
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	100.0
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	100.0
3niz_A	311	Rhodanese family protein; structural genomics, str	100.0
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	100.0
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	100.0
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	100.0
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	100.0
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	100.0
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	100.0
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	100.0
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	100.0
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	100.0
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	100.0
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	100.0
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	100.0
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	100.0
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	100.0
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	100.0
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	100.0
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	100.0
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	100.0
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	100.0
3o0g_A	292	Cell division protein kinase 5; kinase activator c	100.0
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	100.0
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	100.0
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	100.0
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	100.0
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	100.0
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	100.0
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	100.0
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	100.0
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	100.0
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	100.0
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	100.0
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	100.0
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	100.0
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	100.0
3bhy_A	283	Death-associated protein kinase 3; death associate	100.0
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	100.0
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	100.0
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	100.0
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	100.0
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	100.0
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	100.0
3ork_A	311	Serine/threonine protein kinase; structural genomi	100.0
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	100.0
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	100.0
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	100.0
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	100.0
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	100.0
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	100.0
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	100.0
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	100.0
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	100.0
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	100.0
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	100.0
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	100.0
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	100.0
3rp9_A	458	Mitogen-activated protein kinase; structural genom	100.0
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	100.0
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	100.0
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	100.0
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	100.0
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	100.0
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	100.0
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	100.0
3fme_A	290	Dual specificity mitogen-activated protein kinase;	100.0
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	100.0
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	100.0
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	100.0
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	100.0
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	100.0
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	100.0
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	100.0
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	100.0
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	100.0
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	100.0
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	100.0
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	100.0
3an0_A	340	Dual specificity mitogen-activated protein kinase;	100.0
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	100.0
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	100.0
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	100.0
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	100.0
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	100.0
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	100.0
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	100.0
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	100.0
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	100.0
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	100.0
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	100.0
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	100.0
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	100.0
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	100.0
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	100.0
2dyl_A	318	Dual specificity mitogen-activated protein kinase	100.0
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	100.0
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	100.0
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	100.0
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	100.0
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	100.0
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	100.0
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	100.0
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	100.0
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	100.0
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	100.0
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	100.0
3aln_A	327	Dual specificity mitogen-activated protein kinase;	100.0
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	100.0
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	100.0
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	100.0
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	100.0
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	100.0
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	100.0
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	100.0
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	100.0
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	100.0
3soc_A	322	Activin receptor type-2A; structural genomics cons	100.0
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	100.0
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	100.0
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	100.0
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	100.0
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	100.0
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	100.0
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	100.0
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	100.0
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	100.0
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	100.0
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	100.0
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	100.0
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	100.0
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	100.0
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	100.0
2a19_B	284	Interferon-induced, double-stranded RNA-activated	100.0
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	100.0
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	100.0
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	100.0
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	100.0
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	100.0
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	100.0
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	100.0
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	100.0
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	100.0
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	100.0
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	100.0
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	100.0
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	100.0
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	100.0
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	100.0
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	100.0
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	100.0
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	100.0
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	100.0
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	100.0
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.98
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.98
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.98
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.98
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.98
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.98
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.98
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.98
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.98
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.98
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.98
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.98
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.98
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.98
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.98
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.97
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.97
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.97
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.97
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.97
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.97
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.97
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.97
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.97
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.97
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.97
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.97
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.97
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.97
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.97
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.97
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.97
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.97
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.97
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.97
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.96
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.96
3uqc_A	286	Probable conserved transmembrane protein; structur	99.95
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	99.94
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	99.93
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.93
2lhi_A	176	Calmodulin, serine/threonine-protein phosphatase c	99.91
2lmt_A	148	Calmodulin-related protein 97A; spermatogenesis, m	99.91
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	99.9
3u0k_A	440	Rcamp; fluorescent protein, calcium binding, EF-ha	99.9
3i5g_C	159	Myosin catalytic light chain LC-1, mantle muscle;	99.9
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	99.9
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	99.89
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	99.89
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	99.89
3i5g_B	153	Myosin regulatory light chain LC-2, mantle muscle;	99.88
1qv0_A	195	Obelin, OBL; photoprotein, bioluminescence, atomic	99.88
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	99.87
1uhk_A	191	Aequorin 2, aequorin; EF-hand motif, complex, lumi	99.87
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	99.87
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	99.87
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	99.87
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	99.87
3fwb_A	161	Cell division control protein 31; gene gating, com	99.87
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	99.86
2jnf_A	158	Troponin C; stretch activated muscle contraction,	99.86
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	99.86
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	99.86
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	99.86
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	99.86
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	99.86
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	99.86
2lvv_A	226	Flagellar calcium-binding protein TB-24; EF-hand,	99.85
2mys_C	149	Myosin; muscle protein, motor protein; HET: MLY; 2	99.85
2hpk_A	208	Photoprotein berovin; structural genomics, PSI, pr	99.85
3j04_B	143	Myosin regulatory light chain 2, smooth muscle MA	99.85
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	99.85
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	99.85
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	99.84
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	99.84
1q80_A	174	SCP, sarcoplasmic calcium-binding protein; all-alp	99.84
2mys_B	166	Myosin; muscle protein, motor protein; HET: MLY; 2	99.84
1w7j_B	151	Myosin light chain 1; motor protein, unconventiona	99.84
3cs1_A	219	Flagellar calcium-binding protein; myristoylated,	99.84
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	99.83
2ovk_B	153	RLC, myosin regulatory light chain LC-2, mantle mu	99.83
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	99.82
1wdc_B	156	Scallop myosin; calcium binding protein, muscle pr	99.82
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	99.82
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	99.81
3dtp_E	196	RLC, myosin regulatory light chain; muscle protein	99.81
1y1x_A	191	Leishmania major homolog of programmed cell death	99.81
1ggw_A	140	Protein (CDC4P); light chain, cytokinesis, cell cy	99.81
2bl0_B	145	Myosin regulatory light chain; muscle protein, sli	99.81
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	99.8
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	99.8
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	99.79
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	99.79
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	99.79
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	99.78
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	99.78
2hps_A	186	Coelenterazine-binding protein with bound coelent;	99.77
2ct9_A	208	Calcium-binding protein P22; EF-hand, metal bindin	99.77
2qac_A	146	Myosin A tail domain interacting protein MTIP; mal	99.77
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	99.77
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	99.77
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	99.77
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	99.77
3a8r_A	179	Putative uncharacterized protein; EF-hand, membran	99.76
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	99.76
2i7a_A	174	Calpain 13; calcium-dependent cytoplasmic cysteine	99.76
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.76
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	99.76
1ij5_A	323	Plasmodial specific LAV1-2 protein; fourty kDa cal	99.75
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	99.75
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	99.75
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	99.75
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	99.74
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	99.74
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	99.74
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	99.74
2l4h_A	214	Calcium and integrin-binding protein 1; metal bind	99.72
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	99.72
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	99.71
2f33_A	263	Calbindin; EF-hand, Ca2+-binding, metal binding pr	99.71
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	99.71
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	99.67
3bow_A	714	Calpain-2 catalytic subunit; cysteine protease, in	99.66
2be4_A	272	Hypothetical protein LOC449832; DR.36843, BC083168	99.66
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	99.64
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	99.64
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	99.62
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	99.62
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	99.62
1sjj_A	863	Actinin; 3-helix bundle, calponin homology domain,	99.62
1djx_A	624	PLC-D1, phosphoinositide-specific phospholipase C,	99.61
2ggz_A	211	Guanylyl cyclase-activating protein 3; EF hand, gu	99.61
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	99.6
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	99.6
1y1x_A	191	Leishmania major homolog of programmed cell death	99.56
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	99.56
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	99.56
2kyc_A	108	Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand p	99.55
1bjf_A	193	Neurocalcin delta; calcium-binding, myristoylation	99.55
2znd_A	172	Programmed cell death protein 6; penta-EF-hand pro	99.53
2d8n_A	207	Recoverin; structural genomics, NPPSFA, national p	99.52
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.52
2zkm_X	799	1-phosphatidylinositol-4,5-bisphosphate phosphodie	99.5
2i7a_A	174	Calpain 13; calcium-dependent cytoplasmic cysteine	99.49
3sjs_A	220	URE3-BP sequence specific DNA binding protein; EF-	99.47
1qxp_A	900	MU-like calpain; M-calpain, MU-calpain, catalytic	99.46
1alv_A	173	Calpain, S-camld; calcium binding, calmodulin like	99.44
2l2e_A	190	Calcium-binding protein NCS-1; NCS1P, myristoylate	99.4
2lv7_A	100	Calcium-binding protein 7; metal binding protein;	99.4
3a4u_B	143	Multiple coagulation factor deficiency protein 2;	99.39
1fpw_A	190	Yeast frequenin, calcium-binding protein NCS-1; EF	99.37
1k94_A	165	Grancalcin; penta-EF-hand protein, calcium binding	99.37
2r2i_A	198	Guanylyl cyclase-activating protein 1; EF hand, GC	99.37
4drw_A	121	Protein S100-A10/annexin A2 chimeric protein; atyp	99.36
1gjy_A	167	Sorcin, CP-22, V19; calcium binding, calcium-bindi	99.36
1eg3_A	261	Dystrophin; EF-hand like domain, WW domain, struct	99.35
1juo_A	198	Sorcin; calcium-binding proteins, penta-EF-hand, P	99.33
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	99.33
1wy9_A	147	Allograft inflammatory factor 1; EF-hand, calucium	99.32
1s6c_A	183	KV4 potassium channel-interacting protein kchip1B;	99.31
2kld_A	123	Polycystin-2; PC2, PKD2, calcium binding domain, E	99.31
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	99.31
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	99.3
2lv7_A	100	Calcium-binding protein 7; metal binding protein;	99.28
3dd4_A	229	KV channel-interacting protein 4; EF-hands protein	99.27
2ehb_A	207	Calcineurin B-like protein 4; protein complex, Ca(	99.27
1jba_A	204	GCAP-2, protein (guanylate cyclase activating prot	99.27
2jul_A	256	Calsenilin; EF-hand, calcium, LXXLL, DNA binding p	99.27
1nya_A	176	Calerythrin; EF-hand, metal binding protein; NMR {	99.23
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	99.23
1s1e_A	224	KV channel interacting protein 1; kchip, calcium-b	99.23
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	99.22
1g8i_A	190	Frequenin, neuronal calcium sensor 1; calcium bind	99.21
3a4u_B	143	Multiple coagulation factor deficiency protein 2;	99.2
1jfj_A	134	Ehcabp, calcium-binding protein; EF-hand, helix-lo	99.19
3h4s_E	135	KCBP interacting Ca2+-binding protein; kinesin, mo	99.19
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	99.19
3nso_A	101	Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta	99.18
2obh_A	143	Centrin-2; DNA repair complex EF hand superfamily	99.18
3ohm_B	885	1-phosphatidylinositol-4,5-bisphosphate phosphodi	99.17
3nso_A	101	Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, meta	99.17
3bow_A	714	Calpain-2 catalytic subunit; cysteine protease, in	99.17
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	99.16
2jjz_A	150	Ionized calcium-binding adapter molecule 2; EF-han	99.16
1fi6_A	92	EH domain protein REPS1; EPS15 homology domain, EF	99.16
1j7q_A	86	CAVP, calcium vector protein; EF-hand family, calc	99.15
2lmt_A	148	Calmodulin-related protein 97A; spermatogenesis, m	99.14
1xk4_C	113	Calgranulin B; S100 family, heterotetramer, metal	99.14
1fi6_A	92	EH domain protein REPS1; EPS15 homology domain, EF	99.14
3qrx_A	169	Centrin; calcium-binding, EF-hand, cell division,	99.14
3fs7_A	109	Parvalbumin, thymic; calcium-binding protein, EF-h	99.13
4drw_A	121	Protein S100-A10/annexin A2 chimeric protein; atyp	99.13
3n22_A	98	Protein S100-A2; EF-hand, calcium-binding, zinc-bi	99.13
1iq3_A	110	Ralbp1-interacting protein (partner of ralbp1); EF	99.13
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	99.13
3n22_A	98	Protein S100-A2; EF-hand, calcium-binding, zinc-bi	99.13
2sas_A	185	Sarcoplasmic calcium-binding protein; 2.40A {Branc	99.13
2zfd_A	226	Calcineurin B-like protein 2; calcium binding prot	99.13
2bl0_C	142	Myosin regulatory light chain; muscle protein, sli	99.12
2kgr_A	111	Intersectin-1; structure, alternative splicing, ca	99.12
4eto_A	93	Protein S100-A4; calcium-binding protein, EF-hand,	99.12
3zwh_A	104	Protein S100-A4; Ca-binding protein-motor protein	99.12
2lnk_A	113	Protein S100-A4; EF-hand, calcium binding, all alp	99.12
1c07_A	95	Protein (epidermal growth factor receptor pathway	99.12
3khe_A	191	Calmodulin-like domain protein kinase isoform 3; c	99.11
3ll8_B	155	Calcineurin subunit B type 1; protein-peptide dock	99.11
3fwb_A	161	Cell division control protein 31; gene gating, com	99.11
1c07_A	95	Protein (epidermal growth factor receptor pathway	99.11
2jnf_A	158	Troponin C; stretch activated muscle contraction,	99.11
1dtl_A	161	Cardiac troponin C; helix-turn-helix, structural p	99.11
2ccm_A	191	Calexcitin; EF hand, calcium, signaling protein; 1	99.1
1exr_A	148	Calmodulin; high resolution, disorder, metal trans	99.1
3akb_A	166	Putative calcium binding protein; EF-hand, metal b	99.1
1eh2_A	106	EPS15; calcium binding, signaling domain, NPF bind	99.1
1qjt_A	99	EH1, epidermal growth factor receptor substrate su	99.1
4eto_A	93	Protein S100-A4; calcium-binding protein, EF-hand,	99.1
2ktg_A	85	Calmodulin, putative; ehcam, Ca-binding protein, p	99.1
3zwh_A	104	Protein S100-A4; Ca-binding protein-motor protein	99.1
3mse_B	180	Calcium-dependent protein kinase, putative; CDPKS,	99.09
3u0k_A	440	Rcamp; fluorescent protein, calcium binding, EF-ha	99.09
3nxa_A	100	Protein S100-A16; S100 family, calcium binding pro	99.09
5pal_A	109	Parvalbumin; calcium-binding protein; 1.54A {Triak	99.08
4ds7_A	147	Calmodulin, CAM; protein binding, metal binding, s	99.08
2lnk_A	113	Protein S100-A4; EF-hand, calcium binding, all alp	99.08
2f2o_A	179	Calmodulin fused with calmodulin-binding domain of	99.08
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	99.08
1j55_A	95	S-100P protein; metal binding protein; 2.00A {Homo	99.08
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	99.07
1top_A	162	Troponin C; contractIle system protein; 1.78A {Gal	99.07
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	99.07
1k9u_A	78	Polcalcin PHL P 7; pollen allergen, calcium-bindin	99.07
3e3r_A	204	Calcyphosin, calcyphosine; human calcyphosine, EF-	99.07
1m45_A	148	MLC1P, myosin light chain; protein-peptide complex	99.07
3rm1_A	92	Protein S100-B; alpha-helical, EF hand, metal bind	99.07
2y5i_A	99	S100Z, S100 calcium binding protein Z; metal-bindi	99.06
1bu3_A	109	Calcium-binding protein; 1.65A {Merluccius bilinea	99.05
1wdc_C	156	Scallop myosin; calcium binding protein, muscle pr	99.05
3nxa_A	100	Protein S100-A16; S100 family, calcium binding pro	99.04
2joj_A	77	Centrin protein; N-terminal domain, centrin soluti	99.04
3qr0_A	816	Phospholipase C-beta (PLC-beta); PH domain, EF han	99.04
3ox6_A	153	Calcium-binding protein 1; EF-hand, calcium-sensor	99.04
3k21_A	191	PFCDPK3, calcium-dependent protein kinase 3; calci	99.04
2pvb_A	108	Protein (parvalbumin); calcium binding protein, me	99.04
1s6j_A	87	CDPK, calcium-dependent protein kinase SK5; EF-han	99.04
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	99.03
2bec_A	202	Calcineurin B homologous protein 2; calcineurin-ho	99.03
2lhi_A	176	Calmodulin, serine/threonine-protein phosphatase c	99.03
2b1u_A	71	Calmodulin-like protein 5; CLSP, calmodulin-like S	99.02
2kz2_A	94	Calmodulin, CAM; TR2C, metal binding protein; NMR	99.02
2h2k_A	106	Protein S100-A13; calcium binding protein, metal b	99.02
1tiz_A	67	Calmodulin-related protein, putative; helix-turn-h	99.02
1rwy_A	109	Parvalbumin alpha; EF-hand, calcium-binding, calci	99.02
2kgr_A	111	Intersectin-1; structure, alternative splicing, ca	99.02
2h2k_A	106	Protein S100-A13; calcium binding protein, metal b	99.02
2d58_A	107	Allograft inflammatory factor 1; EF-hand, metal bi	99.02
1qjt_A	99	EH1, epidermal growth factor receptor substrate su	99.01
1s6i_A	188	CDPK, calcium-dependent protein kinase SK5; EF-han	99.01
3rm1_A	92	Protein S100-B; alpha-helical, EF hand, metal bind	99.01
1iq3_A	110	Ralbp1-interacting protein (partner of ralbp1); EF	99.01
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	99.01
1wlz_A	105	DJBP, CAP-binding protein complex interacting prot	99.01
1pva_A	110	Parvalbumin; calcium binding; 1.65A {Esox lucius}	99.01
2l4h_A	214	Calcium and integrin-binding protein 1; metal bind	99.0
3li6_A	66	Calcium-binding protein; calcium signaling protein	99.0
3pm8_A	197	PFCDPK2, calcium-dependent protein kinase 2; malar	99.0
2wcb_A	95	Protein S100-A12; calcium signalling, HOST-parasit	99.0
1rro_A	108	RAT oncomodulin; calcium-binding protein; 1.30A {R	99.0
2aao_A	166	CDPK, calcium-dependent protein kinase, isoform AK	99.0
1eh2_A	106	EPS15; calcium binding, signaling domain, NPF bind	99.0
3sg6_A	450	Gcamp2, myosin light chain kinase, green fluoresce	99.0
1j55_A	95	S-100P protein; metal binding protein; 2.00A {Homo	98.99
2y5i_A	99	S100Z, S100 calcium binding protein Z; metal-bindi	98.99
1avs_A	90	Troponin C; muscle contraction, calcium-activated,	98.99
2kax_A	92	Protein S100-A5; EF-hand, calcium binding protien,	98.98
3i5g_C	159	Myosin catalytic light chain LC-1, mantle muscle;	98.98
1c7v_A	81	CAVP, calcium vector protein; EF-hand family, calc	98.97
1xk4_A	93	Calgranulin A; S100 family, heterotetramer, metal	98.97
1yx7_A	83	Calsensin, LAN3-6 antigen; calcium-binding protein	98.97
1c7v_A	81	CAVP, calcium vector protein; EF-hand family, calc	98.96
3li6_A	66	Calcium-binding protein; calcium signaling protein	98.96
1xk4_A	93	Calgranulin A; S100 family, heterotetramer, metal	98.95
2opo_A	86	Polcalcin CHE A 3; calcium-binding protein, dimer,	98.95
2jq6_A	139	EH domain-containing protein 1; metal binding prot	98.95
1h8b_A	75	ACT-EF34, alpha-actinin 2, skeletal muscle isoform	98.95
2pmy_A	91	RAS and EF-hand domain-containing protein; rasef,	98.95
2kn2_A	92	Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco	98.95
1dgu_A	183	Calcium-saturated CIB; helical, EF-hands, blood cl	98.95
2ovk_C	159	Myosin catalytic light chain LC-1, mantle muscle,	98.94

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=100.00  E-value=1.3e-65  Score=517.78  Aligned_cols=366  Identities=37%  Similarity=0.619  Sum_probs=319.8

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++...  ..+++..+..++.||+.||.|||++||+||||||+||+++..+..+.+||+|||+|.
T Consensus       110 ~~~lv~e~~~~g~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~  187 (494)
T 3lij_A          110 NYYLVMECYKGGELFDEIIHR--MKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSA  187 (494)
T ss_dssp             EEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCE
T ss_pred             EEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCe
Confidence            357899999999999999766  679999999999999999999999999999999999999865556779999999998


Q ss_pred             eccCCCcccccccCCcccccccccCCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHH
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS  197 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  197 (429)
                      ...........+||+.|+|||++.+.++.++||||+||++|+|++|.+||.+.+..+....+..+...++.+.|+.+++.
T Consensus       188 ~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~  267 (494)
T 3lij_A          188 VFENQKKMKERLGTAYYIAPEVLRKKYDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEG  267 (494)
T ss_dssp             ECBTTBCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSGGGTTSCHH
T ss_pred             ECCCCccccccCCCcCeeCHHHHcccCCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCchhcccCCHH
Confidence            87766666677899999999999888899999999999999999999999999999999999999888888888899999


Q ss_pred             HHHHHHHhccCCccCcCCHHHHhCCCccccCCCC----CCCCcChHHHHhhHHhhhhhHHHHHHHHhhhccc-chHHHhh
Q 014171          198 AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA----SEIPIDISVLNNMRQFVKYSRLKQFALRALASTL-DDEELAD  272 (429)
Q Consensus       198 ~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~  272 (429)
                      +++||.+||+.||.+|||+.++|+||||+.....    ...+.....+.++++|...+++++.++..+...+ +++++++
T Consensus       268 ~~~li~~~L~~dp~~R~s~~e~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~qa~l~~ia~~~~~~~~~~~  347 (494)
T 3lij_A          268 AKDLIKQMLQFDSQRRISAQQALEHPWIKEMCSKKESGIELPSLANAIENMRKFQNSQKLAQAALLYMASKLTSQEETKE  347 (494)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHHTCHHHHHHHHHHHC---CCCCSSHHHHHHTTTTCCHHHHHHHHHHHHHSCCHHHHHH
T ss_pred             HHHHHHHHCCCChhhCccHHHHhcCcccccCcccccccccccccHHHHHHHHHHHHhHHHHHHHHHHHHHhcccHHHHHH
Confidence            9999999999999999999999999999874221    2223344668889999999999999998888776 8899999


Q ss_pred             hhccccccCCCCCCcccHHHHHHHHHhhC-------CCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhccccc
Q 014171          273 LRDQFDAIDVDKNGSISLEEMRQALAKDL-------PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS  345 (429)
Q Consensus       273 l~~~F~~~D~~~~G~i~~~el~~~l~~~~-------~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~  345 (429)
                      ++++|+.+|.|++|.|+.+||..++....       +..+++.+++.+|+.+|.|++|.|+|+||+.++........   
T Consensus       348 l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~G~I~~~EF~~~~~~~~~~~~---  424 (494)
T 3lij_A          348 LTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYSEFVTVAMDRKSLLS---  424 (494)
T ss_dssp             HHHHHHHHCTTCSSEECHHHHHHTTHHHHSSCCCCC--CHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHTC---
T ss_pred             HHHHHHHhCcCCCCeEcHHHHHHHHHHhcccccccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhhcccc---
Confidence            99999999999999999999999996531       23566889999999999999999999999987654422221   


Q ss_pred             HHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC----CHHHHHHHhCCCCCCcccHHHHHHHHHhccc
Q 014171          346 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTASI  411 (429)
Q Consensus       346 ~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~----~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~  411 (429)
                         .+.+..+|+.||+|++|+|+.+||+.++....    +++++|+.+|.|+||.|+|+||+++|++...
T Consensus       425 ---~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~  491 (494)
T 3lij_A          425 ---KDKLESAFQKFDQDGNGKISVDELASVFGLDHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQKLCS  491 (494)
T ss_dssp             ---HHHHHHHHHHHCTTCSSEECHHHHHHHC-CCSCCCHHHHHHHHTTCSSSSSSEEHHHHHHHHHHHSS
T ss_pred             ---HHHHHHHHHHHCCCCCCcCCHHHHHHHHHhcCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhhcc
Confidence               24688999999999999999999999997532    3899999999999999999999999998654

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=100.00  E-value=2.5e-65  Score=517.04  Aligned_cols=364  Identities=36%  Similarity=0.577  Sum_probs=320.4

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++...  +.+++..+..++.||+.||.|||++||+||||||+||+++..+....+||+|||+|.
T Consensus       120 ~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~  197 (504)
T 3q5i_A          120 YFYLVTEFYEGGELFEQIINR--HKFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSS  197 (504)
T ss_dssp             EEEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTTCE
T ss_pred             EEEEEEecCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCCCE
Confidence            356899999999999999765  679999999999999999999999999999999999999864444579999999998


Q ss_pred             eccCCCcccccccCCcccccccccCCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHH
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS  197 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  197 (429)
                      ............||+.|+|||++.+.++.++||||+||++|+|++|.+||.+.+.......+..+...++.+.|+.++++
T Consensus       198 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~  277 (504)
T 3q5i_A          198 FFSKDYKLRDRLGTAYYIAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFNDWKNISDE  277 (504)
T ss_dssp             ECCTTSCBCCCCSCTTTCCHHHHTTCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHH
T ss_pred             EcCCCCccccccCCcCCCCHHHhccCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCccccCCCCHH
Confidence            87766666677899999999999988899999999999999999999999999999999999998887776677789999


Q ss_pred             HHHHHHHhccCCccCcCCHHHHhCCCccccCCCCCCC---CcChHHHHhhHHhhhhhHHHHHHHHhhhccc-chHHHhhh
Q 014171          198 AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI---PIDISVLNNMRQFVKYSRLKQFALRALASTL-DDEELADL  273 (429)
Q Consensus       198 ~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~l  273 (429)
                      +++||.+||+.||.+|||++++|+||||+........   ......+.++++|...+++++.++..+...+ +++++.++
T Consensus       278 ~~~li~~~L~~dp~~R~t~~e~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~~a~l~~i~~~~~~~~~~~~l  357 (504)
T 3q5i_A          278 AKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNINKSDQKTLCGALSNMRKFEGSQKLAQAAILFIGSKLTTLEERKEL  357 (504)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHHTSHHHHHTCCCCCGGGHHHHHHHHHHHHHCCCCSHHHHHHHHHHHHHTSCHHHHHHH
T ss_pred             HHHHHHHHcCCChhHCCCHHHHhcCHhhhhchhcccccchhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCCcHHHHHHH
Confidence            9999999999999999999999999999986544321   1223457788889899999999988888776 88999999


Q ss_pred             hccccccCCCCCCcccHHHHHHHHHhhC--------CCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhccccc
Q 014171          274 RDQFDAIDVDKNGSISLEEMRQALAKDL--------PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS  345 (429)
Q Consensus       274 ~~~F~~~D~~~~G~i~~~el~~~l~~~~--------~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~  345 (429)
                      +++|+.+|.|++|+|+.+||..++.. +        |..+++.+++.+|+.+|.|++|.|+|+||+.++........   
T Consensus       358 ~~~F~~~D~d~dG~I~~~El~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~~---  433 (504)
T 3q5i_A          358 TDIFKKLDKNGDGQLDKKELIEGYNV-LRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFS---  433 (504)
T ss_dssp             HHHHHHHCTTCSSEECHHHHHHHHHH-HHHHC--CCSCCCHHHHHHHHHHHHCTTCSSSEEHHHHHHHHSCHHHHTC---
T ss_pred             HHHHHeeCCCCCCeEcHHHHHHHHHH-hhhcccccccccccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhhhcccC---
Confidence            99999999999999999999999855 4        56788899999999999999999999999987754422211   


Q ss_pred             HHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC----CHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          346 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       346 ~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~----~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                         .+.++.+|+.||+|++|+|+.+||+.++...+    +++++|..+|.|+||.|+|+||+.+|++..
T Consensus       434 ---~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~  499 (504)
T 3q5i_A          434 ---EERLRRAFNLFDTDKSGKITKEELANLFGLTSISEKTWNDVLGEADQNKDNMIDFDEFVSMMHKIC  499 (504)
T ss_dssp             ---HHHHHHHHHHHCTTCCSEECHHHHHHHTTCSCCCHHHHHHHHHTTCSSCSSSEEHHHHHHHHHHHC
T ss_pred             ---HHHHHHHHHHhcCCCCCcCcHHHHHHHHhhCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHhc
Confidence               24688999999999999999999999988654    389999999999999999999999998765

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=100.00  E-value=3.7e-65  Score=513.51  Aligned_cols=364  Identities=34%  Similarity=0.577  Sum_probs=317.5

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++...  +.+++..+..++.||+.||.|||++||+||||||+||+++.....+.+||+|||+|.
T Consensus       100 ~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~  177 (484)
T 3nyv_A          100 YFYLVGEVYTGGELFDEIISR--KRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLST  177 (484)
T ss_dssp             EEEEEECCCCSCBHHHHHHTC--SCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHH
T ss_pred             EEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeE
Confidence            457899999999999999654  689999999999999999999999999999999999999754467899999999998


Q ss_pred             eccCCCcccccccCCcccccccccCCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHH
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS  197 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  197 (429)
                      ...........+||+.|+|||++.+.++.++||||+||++|+|++|.+||.+.+.......+..+...++.+.|+.+++.
T Consensus       178 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~  257 (484)
T 3nyv_A          178 HFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSES  257 (484)
T ss_dssp             HBCCCCSHHHHTTGGGTCCHHHHHTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGGGSCHH
T ss_pred             EcccccccccCCCCccccCceeecCCCCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCCcccccCCHH
Confidence            87766666677899999999999988999999999999999999999999999999999999999888887778889999


Q ss_pred             HHHHHHHhccCCccCcCCHHHHhCCCccccCCCC---CCCCcChHHHHhhHHhhhhhHHHHHHHHhhhccc-chHHHhhh
Q 014171          198 AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA---SEIPIDISVLNNMRQFVKYSRLKQFALRALASTL-DDEELADL  273 (429)
Q Consensus       198 ~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~l  273 (429)
                      +++||.+||+.||.+|||+.++|+||||+.....   ...+.....+.++++|...+++++.++..+...+ ++++++++
T Consensus       258 ~~~li~~~L~~dp~~R~s~~e~l~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~qa~l~~i~~~~~~~~~~~~l  337 (484)
T 3nyv_A          258 AKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQISVDVPSLDNAILNIRQFQGTQKLAQAALLYMGSKLTSQDETKEL  337 (484)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHTSHHHHHHTC-----CCCBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHCCCChhHCcCHHHHhhChhhcccccccccccccchHHHHHHHHHHhhhhHHHHHHHHHHHhccCcHHHHHHH
Confidence            9999999999999999999999999999875432   2234445678889999999999999998888776 78899999


Q ss_pred             hccccccCCCCCCcccHHHHHHHHH---hhCCCCcc-------HHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhccc
Q 014171          274 RDQFDAIDVDKNGSISLEEMRQALA---KDLPWKLK-------ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH  343 (429)
Q Consensus       274 ~~~F~~~D~~~~G~i~~~el~~~l~---~~~~~~~~-------~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~  343 (429)
                      +++|..+|.|++|.|+.+||..++.   +.+|..++       +.++.++|+.+|.|++|.|+|+||+.++.......  
T Consensus       338 ~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~~--  415 (484)
T 3nyv_A          338 TAIFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYIEYSEFVTVAMDRKTLL--  415 (484)
T ss_dssp             HHHHHHHCTTCSSEEEHHHHHHHHHHHHC----CGGGCSHHHHHHHHHHHHHHHTCCTTSEEEHHHHHHHHHHHHHHH--
T ss_pred             HHHHHHhCcCCCceEeHHHHHHHHHHHhhhcccccccccccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHHhccccC--
Confidence            9999999999999999999955543   34677777       88999999999999999999999998776542221  


Q ss_pred             ccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC----CHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          344 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       344 ~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~----~~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                          ..+.+..+|+.||+|+||+|+.+||+.++...+    +++.+|+.+|.|+||.|+|+||+++|.+.
T Consensus       416 ----~~~~~~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~~~  481 (484)
T 3nyv_A          416 ----SRERLERAFRMFDSDNSGKISSTELATIFGVSDVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLKL  481 (484)
T ss_dssp             ----HHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHTTCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHT
T ss_pred             ----cHHHHHHHHHHHCCCCCCcCCHHHHHHHHHhcCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHhh
Confidence                135688999999999999999999999987533    38999999999999999999999999875

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=100.00  E-value=1.6e-65  Score=516.17  Aligned_cols=366  Identities=34%  Similarity=0.575  Sum_probs=306.0

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+.+...  +.+++..+..++.||+.||.|||++||+||||||+||+++..+..+.+||+|||+|.
T Consensus        95 ~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~  172 (486)
T 3mwu_A           95 SFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLST  172 (486)
T ss_dssp             EEEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTT
T ss_pred             EEEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCe
Confidence            457899999999999999766  579999999999999999999999999999999999999865567789999999998


Q ss_pred             eccCCCcccccccCCcccccccccCCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHH
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS  197 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  197 (429)
                      ...........+||+.|+|||++.+.++.++||||+||++|+|++|.+||.+.+..+....+..+...++.+.|..++++
T Consensus       173 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~  252 (486)
T 3mwu_A          173 CFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDD  252 (486)
T ss_dssp             TBCCC----CCTTGGGGCCGGGGGSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCSGGGGGSCHH
T ss_pred             ECCCCCccCCCcCCCCCCCHHHhCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCCcccCCCCHH
Confidence            77666556677899999999999988999999999999999999999999999999999999999888887778889999


Q ss_pred             HHHHHHHhccCCccCcCCHHHHhCCCccccCCCCCCCCc----ChHHHHhhHHhhhhhHHHHHHHHhhhccc-chHHHhh
Q 014171          198 AKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI----DISVLNNMRQFVKYSRLKQFALRALASTL-DDEELAD  272 (429)
Q Consensus       198 ~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~~~~~~----~~~~l~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~  272 (429)
                      +++||.+||+.||.+|||+.++|+||||+..........    ....+.++++|....++++.++..+...+ +++++++
T Consensus       253 ~~~li~~~L~~dp~~R~t~~~~l~hp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ia~~l~~~~~~~~  332 (486)
T 3mwu_A          253 AKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSETPTISDLPSLESAMTNIRQFQAEKKLAQAALLYMASKLTTLDETKQ  332 (486)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHHHCHHHHHTCCCCCCGGGHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCCHHHHHH
T ss_pred             HHHHHHHHcCCChhhCcCHHHHhcCHhhccCcccCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHH
Confidence            999999999999999999999999999998654432221    23446778889889999999988888776 8899999


Q ss_pred             hhccccccCCCCCCcccHHHHHHHHHh---hCCCCcc----------HHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhh
Q 014171          273 LRDQFDAIDVDKNGSISLEEMRQALAK---DLPWKLK----------ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ  339 (429)
Q Consensus       273 l~~~F~~~D~~~~G~i~~~el~~~l~~---~~~~~~~----------~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~  339 (429)
                      ++++|..+|.|+||.|+.+||..++..   .+|..++          +.++..+|..+|.|++|.|+|+||+..+.....
T Consensus       333 l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~Ef~~~~~~~~~  412 (486)
T 3mwu_A          333 LTEIFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGSGSIEYSEFIASAIDRTI  412 (486)
T ss_dssp             HHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHTCCGGGHHHHTSSCHHHHHHHHHHHHCTTCCSSBCHHHHHHHHSCTTT
T ss_pred             HHHHHHHhCCCCCceeeHHHHHHHHHHhhhhhcccchhcccccchhhHHHHHHHHHHhcCCCCCcCcHHHHHHHHHhhhc
Confidence            999999999999999999999766543   3466655          889999999999999999999999987654332


Q ss_pred             hcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC------CHHHHHHHhCCCCCCcccHHHHHHHHHhccc
Q 014171          340 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTASI  411 (429)
Q Consensus       340 ~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~  411 (429)
                      ...      .+.+..+|+.||+|+||+|+.+||+.++...|      +++.+|..+|.|+||.|+|+||+++|.+...
T Consensus       413 ~~~------~~~~~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~  484 (486)
T 3mwu_A          413 LLS------RERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFVEMLQNFVR  484 (486)
T ss_dssp             TCC------HHHHHHHHHHHCSSCSSSBCSSCC--------------------CCCCSSCSSSBCHHHHHHHHHHHCC
T ss_pred             cch------HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHhhh
Confidence            222      24688899999999999999999999998876      4889999999999999999999999987654

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=4.7e-48  Score=359.80  Aligned_cols=208  Identities=16%  Similarity=0.239  Sum_probs=165.9

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH   85 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~   85 (429)
                      ++.++|||++++++.+...        .......|+|||||+||+|.+++.+.  +.+++..++.++.||+.||.|||++
T Consensus        79 l~~l~HpnIV~~~~~~~~~--------~~~~~~~~lvmEy~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~ylH~~  148 (290)
T 3fpq_A           79 LKGLQHPNIVRFYDSWEST--------VKGKKCIVLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTR  148 (290)
T ss_dssp             HHTCCCTTBCCEEEEEEEE--------ETTEEEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTS
T ss_pred             HHhCCCCCCCcEEEEEeec--------cCCCcEEEEEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3455666666665544321        00012246899999999999999665  6899999999999999999999999


Q ss_pred             C--CeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccCCCCCCcchHHHHHHHHHHhhC
Q 014171           86 G--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCG  163 (429)
Q Consensus        86 ~--i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~DiwslG~il~~l~~g  163 (429)
                      |  |+||||||+|||++.  .++.+||+|||+|+... .....+.+||+.|+|||++.+.++.++||||+||++|+|+||
T Consensus       149 ~~~IiHRDlKp~NILl~~--~~g~vKl~DFGla~~~~-~~~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg  225 (290)
T 3fpq_A          149 TPPIIHRDLKCDNIFITG--PTGSVKIGDLGLATLKR-ASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATS  225 (290)
T ss_dssp             SSCCCCCCCCGGGEEESS--TTSCEEECCTTGGGGCC-TTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHS
T ss_pred             CCCEEecccChhheeEEC--CCCCEEEEeCcCCEeCC-CCccCCcccCccccCHHHcCCCCCcHHHHHHHHHHHHHHHHC
Confidence            9  999999999999973  36789999999997543 334467799999999999998899999999999999999999


Q ss_pred             CCCCCCCChhHH-HHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          164 RRPFWDKTEDGI-FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       164 ~~pf~~~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      ++||.+...... ...+..+..  +....+..++++++||.+||+.||.+|||++++|+||||++.
T Consensus       226 ~~Pf~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~Hp~~~~~  289 (290)
T 3fpq_A          226 EYPYSECQNAAQIYRRVTSGVK--PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE  289 (290)
T ss_dssp             SCTTTTCSSHHHHHHHHTTTCC--CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred             CCCCCCCCcHHHHHHHHHcCCC--CCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcCccccCC
Confidence            999987655444 444444332  222334678999999999999999999999999999999863

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=1.7e-47  Score=363.22  Aligned_cols=187  Identities=32%  Similarity=0.606  Sum_probs=164.6

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|||||||+||+|.+++.+   +.+++.+++.++.||+.||+|||++||+||||||+|||++   .++.+||+|||+|
T Consensus       144 ~~~~ivmEy~~gg~L~~~l~~---~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~---~~g~vKl~DFGla  217 (346)
T 4fih_A          144 DELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLT---HDGRVKLSDFGFC  217 (346)
T ss_dssp             TEEEEEECCCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTC
T ss_pred             CEEEEEEeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEC---CCCCEEEecCcCc
Confidence            345789999999999998854   4799999999999999999999999999999999999998   5789999999999


Q ss_pred             eeccCC-CcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DFIKPG-KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~~~~~-~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      +.+... ....+.+||+.|+|||++.+ .|+.++||||+||++|+|++|++||.+.+..+.+..+....+. ....+..+
T Consensus       218 ~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~~~-~~~~~~~~  296 (346)
T 4fih_A          218 AQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-RLKNLHKV  296 (346)
T ss_dssp             EECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCC-CCSCGGGS
T ss_pred             eecCCCCCcccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCC-CCCccccC
Confidence            887543 34567899999999999974 5799999999999999999999999999988888888765432 23345678


Q ss_pred             CHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                      |+++++||.+||+.||.+|||++|+|+||||++...
T Consensus       297 s~~~~dli~~~L~~dP~~R~ta~e~l~Hp~~~~~~~  332 (346)
T 4fih_A          297 SPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP  332 (346)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred             CHHHHHHHHHHcCCChhHCcCHHHHhcCHhhcCCCC
Confidence            999999999999999999999999999999997654

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=3e-47  Score=356.18  Aligned_cols=183  Identities=28%  Similarity=0.485  Sum_probs=162.5

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||+||+|.+++.+.  +.+++.+++.++.||+.||+|||++||+||||||+|||++   .++.+||+|||+|
T Consensus        99 ~~~~ivmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~---~~g~vKl~DFGla  173 (304)
T 3ubd_A           99 GKLYLILDFLRGGDLFTRLSKE--VMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLD---EEGHIKLTDFGLS  173 (304)
T ss_dssp             TEEEEEECCCTTCEEHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEEC---TTSCEEEESSEEE
T ss_pred             CEEEEEEEcCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEc---CCCCEEecccccc
Confidence            3457899999999999999765  6899999999999999999999999999999999999998   5789999999999


Q ss_pred             eeccC-CCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DFIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~~~~-~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      +.... .....+.+||+.|+|||++.+ .++.++||||+||++|+|+||++||.+.+..+....+......++    +.+
T Consensus       174 ~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~p----~~~  249 (304)
T 3ubd_A          174 KESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAKLGMP----QFL  249 (304)
T ss_dssp             EC-----CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTS
T ss_pred             eeccCCCccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCCCCCC----CcC
Confidence            86543 334467789999999999974 579999999999999999999999999999999999988876554    468


Q ss_pred             CHHHHHHHHHhccCCccCcCC-----HHHHhCCCccccC
Q 014171          195 SNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG  228 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s-----~~e~l~h~~~~~~  228 (429)
                      |+++++||.+||+.||.+|||     ++|+++||||+..
T Consensus       250 s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~Hp~f~~i  288 (304)
T 3ubd_A          250 SPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFSTI  288 (304)
T ss_dssp             CHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHTSGGGTTC
T ss_pred             CHHHHHHHHHHcccCHHHCCCCCcCCHHHHHcCccccCC
Confidence            999999999999999999998     5899999999875

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=4.4e-48  Score=361.89  Aligned_cols=202  Identities=29%  Similarity=0.491  Sum_probs=173.2

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG   86 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~   86 (429)
                      +.++|||+++++..++.            ....|+|||||+||+|.+++.+.  +.+++.+++.++.||+.||+|||++|
T Consensus        87 ~~l~HpnIv~l~~~~~~------------~~~~yivmEy~~gG~L~~~i~~~--~~l~e~~~~~~~~qi~~al~ylH~~~  152 (311)
T 4aw0_A           87 SRLDHPFFVKLYFTFQD------------DEKLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKG  152 (311)
T ss_dssp             TTCCCTTBCCEEEEEEC------------SSEEEEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HhCCCCCCCeEEEEEEe------------CCEEEEEEecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34455555555544432            22346899999999999999765  68999999999999999999999999


Q ss_pred             CeecCCCCCcEEEeecCCCCCEEEeecccceeccCC---CcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh
Q 014171           87 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG---KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC  162 (429)
Q Consensus        87 i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~---~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~  162 (429)
                      |+||||||+|||++   .++++||+|||+|+.+...   ....+.+||+.|+|||++.+ .++.++||||+||++|+|++
T Consensus       153 IiHRDlKPeNILl~---~~g~vKl~DFGla~~~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~  229 (311)
T 4aw0_A          153 IIHRDLKPENILLN---EDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVA  229 (311)
T ss_dssp             EECSCCSGGGEEEC---TTSCEEECCCTTCEECCTTTTCCCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHH
T ss_pred             CccCCCCHHHeEEc---CCCCEEEEEcCCceecCCCCCcccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHh
Confidence            99999999999998   5789999999999987533   23456799999999999975 56899999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHH------HhCCCccccCC
Q 014171          163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ------ALSHPWVREGG  229 (429)
Q Consensus       163 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e------~l~h~~~~~~~  229 (429)
                      |++||.+.+...+..++....+.++    ..+|+++++||.+||+.||.+|||++|      +++||||++..
T Consensus       230 G~~PF~~~~~~~~~~~i~~~~~~~p----~~~s~~~~dli~~lL~~dp~~R~t~~e~~~~~~i~~Hp~F~~id  298 (311)
T 4aw0_A          230 GLPPFRAGNEGLIFAKIIKLEYDFP----EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVT  298 (311)
T ss_dssp             SSCSSCCSSHHHHHHHHHHTCCCCC----TTCCHHHHHHHHHHSCSSGGGSTTSGGGTCHHHHHTSGGGTTCC
T ss_pred             CCCCCCCCCHHHHHHHHHcCCCCCC----cccCHHHHHHHHHHccCCHhHCcChHHHcCCHHHHCCCCcCCCC
Confidence            9999999999999999998887665    368999999999999999999999887      68999998754

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=8.5e-48  Score=365.80  Aligned_cols=186  Identities=22%  Similarity=0.415  Sum_probs=165.5

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||+||+|.+++..++...+++.+++.++.||+.||.|||++||+||||||+|||++   .++.+||+|||+|
T Consensus        96 ~~~yiVmEy~~gg~L~~~i~~~~~~~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~---~~g~vKl~DFGla  172 (350)
T 4b9d_A           96 GSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLT---KDGTVQLGDFGIA  172 (350)
T ss_dssp             TEEEEEEECCTTCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEEC---TTCCEEECSTTEE
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEEC---CCCCEEEcccccc
Confidence            3457899999999999999877767789999999999999999999999999999999999998   5789999999999


Q ss_pred             eeccCCC-cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~~~~~~-~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      +...... ...+.+||+.|+|||++.+ .++.++||||+||++|+|++|++||.+.+..+.+.++..+...   +.+..+
T Consensus       173 ~~~~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~---~~~~~~  249 (350)
T 4b9d_A          173 RVLNSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFP---PVSLHY  249 (350)
T ss_dssp             SCCCHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCC---CCCTTS
T ss_pred             eeecCCcccccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCC---CCCccC
Confidence            8765332 2345689999999999975 5789999999999999999999999999999999998887643   234578


Q ss_pred             CHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      |+++++||.+||+.||.+|||++|+|+||||++.
T Consensus       250 s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~  283 (350)
T 4b9d_A          250 SYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKR  283 (350)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHTSHHHHTT
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhcCHHhhcC
Confidence            9999999999999999999999999999999764

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=9.3e-48  Score=354.80  Aligned_cols=181  Identities=35%  Similarity=0.665  Sum_probs=151.7

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+||||| +|+|.+++.++  +.+++.+++.++.||+.||+|||++||+||||||+|||++   .++.+||+|||+|+
T Consensus        87 ~~~ivmEy~-~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~---~~~~vkl~DFGla~  160 (275)
T 3hyh_A           87 EIIMVIEYA-GNELFDYIVQR--DKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLD---EHLNVKIADFGLSN  160 (275)
T ss_dssp             EEEEEEECC-CEEHHHHHHHS--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEEC---TTCCEEECCSSCC-
T ss_pred             EEEEEEeCC-CCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEEC---CCCCEEEeecCCCe
Confidence            356899999 68999999654  6899999999999999999999999999999999999998   57899999999998


Q ss_pred             eccCCCcccccccCCcccccccccCC-C-CCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKRK-S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~~-~-~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      .........+.+||+.|+|||++.+. + +.++||||+||++|+|+||+.||.+.+.......+..+.+.++    ..+|
T Consensus       161 ~~~~~~~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~~~~~p----~~~s  236 (275)
T 3hyh_A          161 IMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNGVYTLP----KFLS  236 (275)
T ss_dssp             --------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCC----TTSC
T ss_pred             ecCCCCccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCC----CCCC
Confidence            87766666778999999999999764 3 6799999999999999999999999998888888888876554    4689


Q ss_pred             HHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          196 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      +++++||.+||+.||.+|||++|+++||||+..
T Consensus       237 ~~~~~li~~~L~~dP~~R~s~~eil~hpw~k~~  269 (275)
T 3hyh_A          237 PGAAGLIKRMLIVNPLNRISIHEIMQDDWFKVD  269 (275)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHHHCHHHHTT
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHHcCcccccC
Confidence            999999999999999999999999999999753

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=1.7e-46  Score=364.94  Aligned_cols=205  Identities=31%  Similarity=0.570  Sum_probs=173.6

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG   86 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~   86 (429)
                      +.++|+|++++++.+..            ....|||||||+||+|.+++..   +.+++.+++.++.||+.||+|||++|
T Consensus       203 ~~l~HpnIV~l~~~~~~------------~~~~~iVmEy~~gG~L~~~i~~---~~l~e~~~~~~~~qil~aL~ylH~~~  267 (423)
T 4fie_A          203 RDYQHENVVEMYNSYLV------------GDELWVVMEFLEGGALTDIVTH---TRMNEEQIAAVCLAVLQALSVLHAQG  267 (423)
T ss_dssp             HHCCCTTBCCEEEEEEE------------TTEEEEEEECCTTEEHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HhCCCCCCCceEEEEEE------------CCEEEEEEeCCCCCcHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34556665555554432            2345789999999999998853   46999999999999999999999999


Q ss_pred             CeecCCCCCcEEEeecCCCCCEEEeecccceeccCC-CcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCC
Q 014171           87 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGR  164 (429)
Q Consensus        87 i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~  164 (429)
                      |+||||||+|||++   .++.+||+|||+|+.+... ....+.+||+.|+|||++.+ .|+.++||||+||++|+|++|+
T Consensus       268 IiHRDiKp~NILl~---~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~  344 (423)
T 4fie_A          268 VIHRDIKSDSILLT---HDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGE  344 (423)
T ss_dssp             EECCCCSTTTEEEC---TTCCEEECCCTTCEECCSSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSS
T ss_pred             eecccCCHHHEEEc---CCCCEEEecCccceECCCCCccccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCC
Confidence            99999999999998   5789999999999877543 34567899999999999975 5799999999999999999999


Q ss_pred             CCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          165 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       165 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                      +||.+.+....+..+...... ....+..+|+++++||.+||+.||.+|||++|+|+||||++...
T Consensus       345 ~PF~~~~~~~~~~~i~~~~~~-~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~Hp~~~~~~~  409 (423)
T 4fie_A          345 PPYFNEPPLKAMKMIRDNLPP-RLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGP  409 (423)
T ss_dssp             CTTTTSCHHHHHHHHHHSCCC-CCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred             CCCCCcCHHHHHHHHHcCCCC-CCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHHhcCCCC
Confidence            999999988888888766432 23345678999999999999999999999999999999998644

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=3.7e-46  Score=352.97  Aligned_cols=207  Identities=24%  Similarity=0.296  Sum_probs=168.8

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG   86 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~   86 (429)
                      +.++|||++++++.+..            ....|||||||+||+|.+++.+.  +.+++..++.++.||+.||+|||++|
T Consensus       105 ~~l~HpnIV~l~~~~~~------------~~~~~ivmEy~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~aL~ylH~~~  170 (336)
T 4g3f_A          105 AGLSSPRIVPLYGAVRE------------GPWVNIFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHTRR  170 (336)
T ss_dssp             TTCCCTTBCCEEEEEEE------------TTEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             HhCCCCCCCcEEEEEEE------------CCEEEEEEeccCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            44555555555544332            23457899999999999999665  68999999999999999999999999


Q ss_pred             CeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc------ccccccCCcccccccccC-CCCCCcchHHHHHHHHH
Q 014171           87 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK------FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYI  159 (429)
Q Consensus        87 i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~------~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~  159 (429)
                      |+||||||+|||++.  +..++||+|||+|+.+.....      ....+||+.|+|||++.+ .++.++||||+||++|+
T Consensus       171 IiHRDlKp~NILl~~--~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilye  248 (336)
T 4g3f_A          171 ILHGDVKADNVLLSS--DGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLH  248 (336)
T ss_dssp             EECSCCCGGGEEECT--TSCCEEECCCTTCEEC------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHH
T ss_pred             ceecccCHHHEEEeC--CCCEEEEeeCCCCeEccCCCcccceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHH
Confidence            999999999999984  223699999999987654321      234579999999999975 57899999999999999


Q ss_pred             HhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHH-------------hCCCccc
Q 014171          160 LLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA-------------LSHPWVR  226 (429)
Q Consensus       160 l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~-------------l~h~~~~  226 (429)
                      |+||++||.+.+......++....+.+. ..++.+++.+++||.+||+.||.+|||+.|+             ++|||++
T Consensus       249 mltG~~Pf~~~~~~~~~~~i~~~~~~~~-~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~  327 (336)
T 4g3f_A          249 MLNGCHPWTQYFRGPLCLKIASEPPPIR-EIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKG  327 (336)
T ss_dssp             HHHSSCSSTTTCCSCCHHHHHHSCCGGG-GSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSS
T ss_pred             HHHCcCCCCCCCHHHHHHHHHcCCCCch-hcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcC
Confidence            9999999999888888888887765332 2346789999999999999999999999997             6799998


Q ss_pred             cCCC
Q 014171          227 EGGD  230 (429)
Q Consensus       227 ~~~~  230 (429)
                      +...
T Consensus       328 ~~~~  331 (336)
T 4g3f_A          328 EYKE  331 (336)
T ss_dssp             SCCC
T ss_pred             CCCC
Confidence            7643

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=3.7e-44  Score=348.80  Aligned_cols=213  Identities=24%  Similarity=0.369  Sum_probs=170.6

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH   85 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~   85 (429)
                      ++.++|+|++++.+++.........      ...|+|||||. |+|.+++.+  .+.+++..++.++.||+.||.|||++
T Consensus       107 l~~l~HpnIv~l~~~~~~~~~~~~~------~~~~ivmE~~~-g~L~~~i~~--~~~l~~~~~~~~~~qil~al~ylH~~  177 (398)
T 4b99_A          107 LKHFKHDNIIAIKDILRPTVPYGEF------KSVYVVLDLME-SDLHQIIHS--SQPLTLEHVRYFLYQLLRGLKYMHSA  177 (398)
T ss_dssp             HHHCCCTTBCCEEEECCCSSCTTTC------CCEEEEEECCS-EEHHHHHTS--SSCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHhcCCCCcceEeeeeecccccccC------CEEEEEEeCCC-CCHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            3455677777666665543222222      23468999996 679998844  47899999999999999999999999


Q ss_pred             CCeecCCCCCcEEEeecCCCCCEEEeecccceeccCC-----CcccccccCCcccccccccC--CCCCCcchHHHHHHHH
Q 014171           86 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG-----KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITY  158 (429)
Q Consensus        86 ~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~-----~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~  158 (429)
                      ||+||||||+|||++   .++.+||+|||+|+.+...     ....+.+||+.|+|||++.+  .++.++||||+||++|
T Consensus       178 ~iiHRDlKP~NIl~~---~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~  254 (398)
T 4b99_A          178 QVIHRDLKPSNLLVN---ENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFG  254 (398)
T ss_dssp             TCBCCCCCGGGEEEC---TTCCEEECCCTTCBCC-------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHH
T ss_pred             cCcCCCcCccccccC---CCCCEEEeecceeeecccCccccccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHH
Confidence            999999999999998   5789999999999866432     23456799999999999865  4589999999999999


Q ss_pred             HHhhCCCCCCCCChhHHHHHHHhcCCCCCCC---------------------------CCCCCCHHHHHHHHHhccCCcc
Q 014171          159 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK---------------------------PWPSISNSAKDFVKKLLVKDPR  211 (429)
Q Consensus       159 ~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~---------------------------~~~~~~~~~~~li~~~l~~dp~  211 (429)
                      +|++|++||.+.+..+.+..|.......+..                           .++.+++++.+||.+||+.||.
T Consensus       255 ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~  334 (398)
T 4b99_A          255 EMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYIQSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPS  334 (398)
T ss_dssp             HHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHHHSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTT
T ss_pred             HHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhhhcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChh
Confidence            9999999999999888887776533221110                           1245789999999999999999


Q ss_pred             CcCCHHHHhCCCccccCCC
Q 014171          212 ARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       212 ~R~s~~e~l~h~~~~~~~~  230 (429)
                      +|||++|+|+||||++...
T Consensus       335 ~R~ta~e~L~Hp~f~~~~~  353 (398)
T 4b99_A          335 ARISAAAALRHPFLAKYHD  353 (398)
T ss_dssp             TSCCHHHHTTSGGGTTTCC
T ss_pred             HCcCHHHHhcCHhhCcCCC
Confidence            9999999999999998654

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=1.5e-43  Score=340.84  Aligned_cols=185  Identities=28%  Similarity=0.490  Sum_probs=147.5

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||+||+|.+++     +.+++.+++.++.||+.||+|||++||+||||||+|||++.  +.+.+||+|||+|
T Consensus        93 ~~~~lvmE~~~g~~L~~~~-----~~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~--~~~~~kl~DFGla  165 (361)
T 4f9c_A           93 DHVVIAMPYLEHESFLDIL-----NSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNR--RLKKYALVDFGLA  165 (361)
T ss_dssp             TEEEEEEECCCCCCHHHHH-----TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEET--TTTEEEECCCTTC
T ss_pred             CEEEEEEeCCCcccHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeC--CCCeEEECcCCCC
Confidence            3457899999999999988     36999999999999999999999999999999999999984  3478999999999


Q ss_pred             eeccCCC-----------------------------cccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCC
Q 014171          117 DFIKPGK-----------------------------KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRR  165 (429)
Q Consensus       117 ~~~~~~~-----------------------------~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~  165 (429)
                      +......                             ...+.+||+.|+|||++.+  .++.++||||+||++|+|++|+.
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~  245 (361)
T 4f9c_A          166 QGTHDTKIELLKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRY  245 (361)
T ss_dssp             EECTTCSCGGGGGC--------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCS
T ss_pred             cccCCccccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCC
Confidence            7654321                             1234579999999999865  36889999999999999999999


Q ss_pred             CCCCCCh-hHHHHHHHhc--------------------------------------CC------------CCCCCCCCCC
Q 014171          166 PFWDKTE-DGIFKEVLRN--------------------------------------KP------------DFRRKPWPSI  194 (429)
Q Consensus       166 pf~~~~~-~~~~~~i~~~--------------------------------------~~------------~~~~~~~~~~  194 (429)
                      ||.+.+. ...+..+...                                      ..            ......|+.+
T Consensus       246 Pf~~~~~~~~~l~~I~~~~G~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~i  325 (361)
T 4f9c_A          246 PFYKASDDLTALAQIMTIRGSRETIQAAKTFGKSILCSKEVPAQDLRKLCERLRGMDSSTPKLTSDIQGHATNLEGWNEV  325 (361)
T ss_dssp             SSSCCSSHHHHHHHHHHHHCHHHHHHHHHHTTEEEEESSCCCCCCHHHHHHHHC----------------------CTTC
T ss_pred             CCCCCCCHHHHHHHHHHhcCCccchhhhhhccccccccccCcchhhhHHHHhhccccccccccccccccccccccccccC
Confidence            9966543 3333332210                                      00            0111235678


Q ss_pred             CHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      |+++++||.+||+.||.+|+|++|+|+||||++.
T Consensus       326 s~~a~DLl~~lL~~dP~~R~ta~eaL~Hp~f~~i  359 (361)
T 4f9c_A          326 PDEAYDLLDKLLDLNPASRITAEEALLHPFFKDM  359 (361)
T ss_dssp             CHHHHHHHHHHTCSCTTTSCCHHHHHTSGGGTTC
T ss_pred             CHHHHHHHHHHCcCChhHCcCHHHHhcCcccCCC
Confidence            9999999999999999999999999999999875

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=1.8e-43  Score=331.33  Aligned_cols=199  Identities=24%  Similarity=0.343  Sum_probs=157.2

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH   85 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~   85 (429)
                      ++.++|+|++.+++++.             ....|+|||||+||+|.+++... .+.+++.++..++.||+.||.|||++
T Consensus        86 l~~l~HpNIV~l~g~~~-------------~~~~~iVmEy~~gGsL~~~l~~~-~~~l~~~~~~~i~~qia~gL~yLH~~  151 (307)
T 3omv_A           86 LRKTRHVNILLFMGYMT-------------KDNLAIVTQWCEGSSLYKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAK  151 (307)
T ss_dssp             HTTCCCTTBCCEEEEEC-------------SSSCEEEEECCSSCBHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHhCCCCCEeeEEEEEE-------------CCeEEEEEEcCCCCCHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            44566777766665432             12346899999999999999654 36799999999999999999999999


Q ss_pred             CCeecCCCCCcEEEeecCCCCCEEEeecccceeccCC---CcccccccCCcccccccccC----CCCCCcchHHHHHHHH
Q 014171           86 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG---KKFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITY  158 (429)
Q Consensus        86 ~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~---~~~~~~~g~~~y~aPE~~~~----~~~~~~DiwslG~il~  158 (429)
                      +|+||||||+|||++   .++.+||+|||+|+.....   ......+||+.|+|||++.+    .++.++||||+||++|
T Consensus       152 ~IiHRDlKp~NILl~---~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~  228 (307)
T 3omv_A          152 NIIHRDMKSNNIFLH---EGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLY  228 (307)
T ss_dssp             TCBCSCCCSSSEEEE---TTEEEEECCCSSCBC------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHH
T ss_pred             CccCCccCHHHEEEC---CCCcEEEeeccCceecccCCcceeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHH
Confidence            999999999999999   5789999999999865432   23345689999999999853    4688999999999999


Q ss_pred             HHhhCCCCCCCCChhHHHHHHHhcCCCCC--CCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          159 ILLCGRRPFWDKTEDGIFKEVLRNKPDFR--RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       159 ~l~~g~~pf~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ||+||+.||.+.+.......+.......+  ...++.+++++.+|+.+||+.||.+|||+.++++
T Consensus       229 Elltg~~Pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~  293 (307)
T 3omv_A          229 ELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILS  293 (307)
T ss_dssp             HHHHSSCTTTTCCCHHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHH
T ss_pred             HHHHCCCCCCCCChHHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence            99999999988776655555544332222  2345678999999999999999999999998753

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=4.4e-43  Score=357.31  Aligned_cols=210  Identities=31%  Similarity=0.584  Sum_probs=182.6

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG   86 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~   86 (429)
                      +.++|+|++++...+..            ....|+|||||.||+|.+++.+. .+.+++.+++.++.||+.||.|||++|
T Consensus       209 ~~l~hpnIv~l~~~~~~------------~~~~~iv~E~~~gg~L~~~i~~~-~~~l~e~~~~~~~~qi~~al~ylH~~~  275 (573)
T 3uto_A          209 SVLRHPTLVNLHDAFED------------DNEMVMIYEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHENN  275 (573)
T ss_dssp             HHTCCTTBCCEEEEEEC------------SSEEEEEEECCCCCBHHHHHTCT-TSCEEHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HhCCCCCCCeEEEEEEE------------CCEEEEEEeecCCCcHHHHHHHh-CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34455555555554432            23346899999999999988543 367999999999999999999999999


Q ss_pred             CeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCC
Q 014171           87 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRR  165 (429)
Q Consensus        87 i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~  165 (429)
                      |+||||||+|||++.. ..+.+||+|||+|+.+.........+||+.|+|||++.+ .++.++||||+||++|+|++|.+
T Consensus       276 iiHRDlKp~Nill~~~-~~~~vKl~DFG~a~~~~~~~~~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~  354 (573)
T 3uto_A          276 YVHLDLKPENIMFTTK-RSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLS  354 (573)
T ss_dssp             EECCCCCGGGEEESSS-SCCCEEECCCSSCEECCTTSEEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCC
T ss_pred             eeeccCChhhccccCC-CCCCEEEeeccceeEccCCCceeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence            9999999999999842 247899999999999887777777899999999999975 46889999999999999999999


Q ss_pred             CCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       166 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                      ||.+.+..+.+..+......++...++.+|+++++||.+||+.||.+|||++|+|+||||+....
T Consensus       355 Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~Hpw~~~~~~  419 (573)
T 3uto_A          355 PFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNA  419 (573)
T ss_dssp             SSCCSSHHHHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTSCCCC
T ss_pred             CCCCcCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcCcCCCCC
Confidence            99999999999999998888888778889999999999999999999999999999999997654

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=2.2e-42  Score=350.84  Aligned_cols=182  Identities=26%  Similarity=0.389  Sum_probs=158.2

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++.+.  +.+++..++.|+.||+.||+|||++||+||||||+|||++   .++++||+|||+|+
T Consensus       266 ~lylVmEy~~GGdL~~~l~~~--~~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld---~~G~vKL~DFGlA~  340 (689)
T 3v5w_A          266 KLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISDLGLAC  340 (689)
T ss_dssp             EEEEEECCCCSCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEEC---TTSCEEECCCTTCE
T ss_pred             EEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEe---CCCCEEecccceee
Confidence            356899999999999999765  7899999999999999999999999999999999999999   58899999999998


Q ss_pred             eccCCCcccccccCCccccccccc-C-CCCCCcchHHHHHHHHHHhhCCCCCCCCCh---hHHHHHHHhcCCCCCCCCCC
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLK-R-KSGPESDVWSIGVITYILLCGRRPFWDKTE---DGIFKEVLRNKPDFRRKPWP  192 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~-~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~---~~~~~~i~~~~~~~~~~~~~  192 (429)
                      ...... ..+.+||+.|+|||++. + .|+.++|+||+||++|+|++|++||.+.+.   ..+...+......++    .
T Consensus       341 ~~~~~~-~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~~~~~~~i~~~i~~~~~~~p----~  415 (689)
T 3v5w_A          341 DFSKKK-PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVELP----D  415 (689)
T ss_dssp             ECSSCC-CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGGCCCHHHHHHHHHHCCCCCC----T
T ss_pred             ecCCCC-CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCC----c
Confidence            776443 35679999999999996 3 579999999999999999999999976433   344555666655443    4


Q ss_pred             CCCHHHHHHHHHhccCCccCcCC-----HHHHhCCCccccCC
Q 014171          193 SISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREGG  229 (429)
Q Consensus       193 ~~~~~~~~li~~~l~~dp~~R~s-----~~e~l~h~~~~~~~  229 (429)
                      .+|+++++||.+||+.||.+|++     ++++++||||+...
T Consensus       416 ~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~HpfF~~id  457 (689)
T 3v5w_A          416 SFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSLD  457 (689)
T ss_dssp             TSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTTSGGGTTCC
T ss_pred             cCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhcCccccCCC
Confidence            68999999999999999999998     79999999999753

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=1.2e-42  Score=325.58  Aligned_cols=202  Identities=16%  Similarity=0.268  Sum_probs=167.1

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhc-----------CCCCCHHHHHHHHHH
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKK-----------DSRYTEKDAAVVVRQ   74 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-----------~~~l~~~~~~~i~~q   74 (429)
                      ++.++|+|++++++++..            +...|+|||||+||+|.+++.+..           ...+++.++..++.|
T Consensus        69 l~~l~HpnIV~l~g~~~~------------~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~q  136 (299)
T 4asz_A           69 LTNLQHEHIVKFYGVCVE------------GDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQ  136 (299)
T ss_dssp             HTTCCCTTBCCEEEEECS------------SSSEEEEEECCTTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHH
T ss_pred             HHhCCCCCCccEEEEEee------------CCEEEEEEEcCCCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHH
Confidence            445667777776665542            233568999999999999997542           357999999999999


Q ss_pred             HHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc---ccccccCCccccccccc-CCCCCCcch
Q 014171           75 MLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDV  150 (429)
Q Consensus        75 il~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~~~-~~~~~~~Di  150 (429)
                      |+.||.|||+++|+||||||+|||++   .++.+||+|||+|+.......   .....||+.|+|||++. +.++.++||
T Consensus       137 ia~gl~yLH~~~iiHRDlKp~NILl~---~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DV  213 (299)
T 4asz_A          137 IAAGMVYLASQHFVHRDLATRNCLVG---ENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDV  213 (299)
T ss_dssp             HHHHHHHHHHTTCCCSCCSGGGEEEC---GGGCEEECCCSCHHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHH
T ss_pred             HHHHHHHHHhCCcccCccCHhhEEEC---CCCcEEECCcccceecCCCCceeecCceecChhhcCHHHHcCCCCCchhhH
Confidence            99999999999999999999999998   478999999999986643322   23346899999999986 567999999


Q ss_pred             HHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcccc
Q 014171          151 WSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE  227 (429)
Q Consensus       151 wslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~  227 (429)
                      ||+||++|||+| |+.||.+.+..+....+..+...   +.++.+|+++.+|+.+||+.||.+|||++++.  +|+++
T Consensus       214 wS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~---~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~--~~L~~  286 (299)
T 4asz_A          214 WSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVL---QRPRTCPQEVYELMLGCWQREPHMRKNIKGIH--TLLQN  286 (299)
T ss_dssp             HHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH--HHHHH
T ss_pred             HHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCC---CCCccchHHHHHHHHHHcCCChhHCcCHHHHH--HHHHH
Confidence            999999999998 89999999999988888877542   22356899999999999999999999999984  56543

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=4.8e-43  Score=328.71  Aligned_cols=215  Identities=20%  Similarity=0.317  Sum_probs=149.8

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHH
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKD-SRYTEKDAAVVVRQMLRVAAECHL   84 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~qil~aL~~lH~   84 (429)
                      ++.++|||++++++.+..................|+|||||.||+|.+++..... ...++..++.++.||+.||+|||+
T Consensus        57 l~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~~gg~L~~~l~~~~~~~~~~~~~~~~i~~qi~~al~ylH~  136 (299)
T 4g31_A           57 LAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEAVEFLHS  136 (299)
T ss_dssp             HTTCCCTTBCCEEEEEEEEC----------CEEEEEEEECCCSCCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhCCCCCCCeEEEEEEecCccccccccCCCcEEEEEEecCCCCcHHHHHHhcCCCChhHHHHHHHHHHHHHHHHHHHHH
Confidence            4456677777766655432111000000011124689999999999999965421 234567789999999999999999


Q ss_pred             CCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc-------------ccccccCCcccccccccC-CCCCCcch
Q 014171           85 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-------------FQDIVGSAYYVAPEVLKR-KSGPESDV  150 (429)
Q Consensus        85 ~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~-------------~~~~~g~~~y~aPE~~~~-~~~~~~Di  150 (429)
                      +||+||||||+|||++   .++.+||+|||+|+.......             ..+.+||+.|+|||++.+ .++.++||
T Consensus       137 ~~IiHRDlKp~NILl~---~~~~vKl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~Di  213 (299)
T 4g31_A          137 KGLMHRDLKPSNIFFT---MDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDI  213 (299)
T ss_dssp             TTCCCCCCCGGGEEEC---TTCCEEECCCCCC--------------------------CCCTTSCHHHHTTCCCCTHHHH
T ss_pred             CcCccccCcHHHeEEC---CCCcEEEccCccceecCCCccccccccccccccccCCcccCccccCHHHHcCCCCCCHHHH
Confidence            9999999999999998   578999999999987653221             234579999999999975 57999999


Q ss_pred             HHHHHHHHHHhhCCCCCCCCChh-HHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          151 WSIGVITYILLCGRRPFWDKTED-GIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       151 wslG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      ||+||++|+|++   ||.+.... .....+....  ++ +.++..++.+.+||.+||+.||.+|||+.++++||||++..
T Consensus       214 wSlGvilyell~---Pf~~~~~~~~~~~~~~~~~--~p-~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~~  287 (299)
T 4g31_A          214 FSLGLILFELLY---PFSTQMERVRTLTDVRNLK--FP-PLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDLD  287 (299)
T ss_dssp             HHHHHHHHHHHS---CCSSHHHHHHHHHHHHTTC--CC-HHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC-
T ss_pred             HHHHHHHHHHcc---CCCCccHHHHHHHHHhcCC--CC-CCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCCC
Confidence            999999999996   77543322 2222233222  22 22234567789999999999999999999999999998764

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=2.9e-42  Score=324.27  Aligned_cols=199  Identities=18%  Similarity=0.248  Sum_probs=165.8

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhc--------------CCCCCHHHHHHH
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKK--------------DSRYTEKDAAVV   71 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i   71 (429)
                      ++.++|+|++.+++++..            +...|+|||||++|+|.++|..+.              ...+++.++..+
T Consensus        83 l~~l~HpNIV~l~g~~~~------------~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i  150 (308)
T 4gt4_A           83 RARLQHPNVVCLLGVVTK------------DQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL  150 (308)
T ss_dssp             HHHCCCTTBCCEEEEECS------------SSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHH
T ss_pred             HHhCCCCCCCCcceEEEE------------CCEEEEEEEcCCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHH
Confidence            345667777777665542            233568999999999999996542              246999999999


Q ss_pred             HHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCC---CcccccccCCccccccccc-CCCCCC
Q 014171           72 VRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG---KKFQDIVGSAYYVAPEVLK-RKSGPE  147 (429)
Q Consensus        72 ~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~---~~~~~~~g~~~y~aPE~~~-~~~~~~  147 (429)
                      +.||+.||.|||+++|+||||||+|||++   .++.+||+|||+|+.....   .......||+.|+|||++. +.++.+
T Consensus       151 ~~qia~gl~yLH~~~iiHRDLK~~NILl~---~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~k  227 (308)
T 4gt4_A          151 VAQIAAGMEYLSSHHVVHKDLATRNVLVY---DKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSID  227 (308)
T ss_dssp             HHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCccccceEEC---CCCCEEECCcccceeccCCCceeEecccccCCcccCHHHHhCCCCCcc
Confidence            99999999999999999999999999999   4789999999999866432   2234568999999999986 567999


Q ss_pred             cchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          148 SDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       148 ~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      +||||+||++|||+| |..||.+.+..+....+..+...   +.++.+++.+.+|+.+||+.||.+|||+.+++++
T Consensus       228 sDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~~~~---~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~  300 (308)
T 4gt4_A          228 SDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVL---PCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSR  300 (308)
T ss_dssp             HHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             chhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            999999999999998 89999999998888888766532   2335789999999999999999999999999764

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=5.3e-42  Score=325.48  Aligned_cols=198  Identities=17%  Similarity=0.214  Sum_probs=158.8

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhc-------------CCCCCHHHHHHHH
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKK-------------DSRYTEKDAAVVV   72 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-------------~~~l~~~~~~~i~   72 (429)
                      ++.++|+|++++++++..            +...|+|||||+||+|.+++.+..             .+.+++.++..++
T Consensus        97 l~~l~HpnIV~l~g~~~~------------~~~~~lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~  164 (329)
T 4aoj_A           97 LTMLQHQHIVRFFGVCTE------------GRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA  164 (329)
T ss_dssp             HTTCCCTTBCCEEEEECS------------SSSEEEEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHH
T ss_pred             HHhCCCCCCCcEEEEEEE------------CCEEEEEEEcCCCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHH
Confidence            455677777777765542            233468999999999999997542             2469999999999


Q ss_pred             HHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCC---cccccccCCcccccccccC-CCCCCc
Q 014171           73 RQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKR-KSGPES  148 (429)
Q Consensus        73 ~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~---~~~~~~g~~~y~aPE~~~~-~~~~~~  148 (429)
                      .||+.||.|||+++|+||||||+|||++   .++.+||+|||+|+......   ......||+.|+|||++.+ .++.++
T Consensus       165 ~qia~gl~yLH~~~iiHRDLKp~NILl~---~~~~~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~s  241 (329)
T 4aoj_A          165 SQVAAGMVYLAGLHFVHRDLATRNCLVG---QGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTES  241 (329)
T ss_dssp             HHHHHHHHHHHHTTCCCSCCCGGGEEEE---TTTEEEECCCC----------------CCCCGGGCCHHHHTTCCCCHHH
T ss_pred             HHHHHHHHHHhcCCeecccccHhhEEEC---CCCcEEEcccccceeccCCCcceecCcccccccccChhhhcCCCCCccc
Confidence            9999999999999999999999999999   58899999999998764332   2234679999999999875 579999


Q ss_pred             chHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          149 DVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       149 DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ||||+||++|||+| |+.||.+.+..+....+..+...   +.++.+++++.+|+.+||+.||.+|||++++++
T Consensus       242 DvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g~~~---~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~  312 (329)
T 4aoj_A          242 DVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGREL---ERPRACPPEVYAIMRGCWQREPQQRHSIKDVHA  312 (329)
T ss_dssp             HHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHTCCC---CCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHH
T ss_pred             cccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCC---CCcccccHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence            99999999999999 89999999988888888776532   223568999999999999999999999999874

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=100.00  E-value=4.5e-42  Score=340.25  Aligned_cols=223  Identities=33%  Similarity=0.651  Sum_probs=194.3

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||.||+|.+.+...  +.+++..+..++.||+.||.|||++||+||||||+||+++....++.+||+|||+|
T Consensus        83 ~~~~lv~E~~~gg~L~~~i~~~--~~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a  160 (444)
T 3soa_A           83 GHHYLIFDLVTGGELFEDIVAR--EYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLA  160 (444)
T ss_dssp             SEEEEEECCCBCCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSC
T ss_pred             CEEEEEEEeCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCcee
Confidence            3457899999999999999665  67999999999999999999999999999999999999996555788999999999


Q ss_pred             eeccCCC-cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~~~~~~-~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      ....... ......||+.|+|||++.+ .++.++||||+||++|+|++|.+||.+.+.......+..+...++.+.|+.+
T Consensus       161 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  240 (444)
T 3soa_A          161 IEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTV  240 (444)
T ss_dssp             BCCCTTCCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTTTTS
T ss_pred             EEecCCCceeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCccccccC
Confidence            8765433 2355689999999999976 5689999999999999999999999999999999999999988888888899


Q ss_pred             CHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCCCCCCcChHHHHhhHHhhhhhHHHHHHHHhh
Q 014171          195 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRAL  261 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~  261 (429)
                      ++++++||.+||+.||.+|||+.++|+||||+..............+..+++|...++++..++..+
T Consensus       241 s~~~~~li~~~L~~dP~~Rpta~e~L~hp~~~~~~~~~~~~~~~~~~~~l~~~~~~~klk~~~~~~~  307 (444)
T 3soa_A          241 TPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVASCMHRQETVDCLKKFNARRKLKGAILTVM  307 (444)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHHSCTTHHHHHHSCCCCCHHHHHHHHHHHHHHHHHTTCSCEE
T ss_pred             CHHHHHHHHHHcCCChhHCCCHHHHhcCccccCCccccccchhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999875433333444567888888888888887766655

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=100.00  E-value=2.7e-41  Score=326.77  Aligned_cols=222  Identities=32%  Similarity=0.630  Sum_probs=192.4

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++...  ..+++..+..++.||+.||.|||++||+||||||+||+++..+..+.+||+|||++.
T Consensus       102 ~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~  179 (362)
T 2bdw_A          102 FHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI  179 (362)
T ss_dssp             EEEEEECCCCSCBHHHHHTTC--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCB
T ss_pred             EEEEEEecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcce
Confidence            357899999999999998543  679999999999999999999999999999999999999865555679999999998


Q ss_pred             eccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCH
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN  196 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  196 (429)
                      ............||+.|+|||++.+ .++.++||||+||++|+|++|.+||.+.+.......+..+...++.+.|..+++
T Consensus       180 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  259 (362)
T 2bdw_A          180 EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTP  259 (362)
T ss_dssp             CCTTCCSCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTGGGGSCH
T ss_pred             EecCCcccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCcccccCCCH
Confidence            8776655566789999999999875 568999999999999999999999999999899999999888888777888999


Q ss_pred             HHHHHHHHhccCCccCcCCHHHHhCCCccccCCCCCCCCcChHHHHhhHHhhhhhHHHHHHHHhh
Q 014171          197 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRAL  261 (429)
Q Consensus       197 ~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~  261 (429)
                      ++++||.+||+.||.+|||+.++|+||||+..............+..+++|....+++..++..+
T Consensus       260 ~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  324 (362)
T 2bdw_A          260 EAKSLIDSMLTVNPKKRITADQALKVPWICNRERVASAIHRQDTVDCLKKFNARRKLKGAILTTM  324 (362)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHTTSHHHHTHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHhcCcccCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999865333333344556778888888888887766544

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=2e-41  Score=324.15  Aligned_cols=179  Identities=22%  Similarity=0.286  Sum_probs=149.8

Q ss_pred             ceeEeeecCCCChHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCC
Q 014171           39 KLRRIRLCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE  104 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~  104 (429)
                      .|+|||||+||+|.++|.+.+              ...+++..+..++.||+.||.|||+++|+||||||+|||++   .
T Consensus       144 ~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~---~  220 (353)
T 4ase_A          144 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---E  220 (353)
T ss_dssp             CEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---G
T ss_pred             EEEEEEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeC---C
Confidence            468999999999999997643              24589999999999999999999999999999999999999   4


Q ss_pred             CCCEEEeecccceeccCCCc---ccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHH
Q 014171          105 DSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV  179 (429)
Q Consensus       105 ~~~~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i  179 (429)
                      ++.+||+|||+|+.+.....   .....||+.|+|||++. +.++.++||||+||++|||+| |+.||.+.+....+..+
T Consensus       221 ~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~  300 (353)
T 4ase_A          221 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR  300 (353)
T ss_dssp             GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHH
T ss_pred             CCCEEECcchhhhhcccCCCceeeccccccccccCHHHHhcCCCCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            78999999999987654332   23557899999999986 567999999999999999998 99999887655544444


Q ss_pred             HhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          180 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      ......++  .++.+++++.+++.+||+.||.+|||+.++++|
T Consensus       301 i~~g~~~~--~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~  341 (353)
T 4ase_A          301 LKEGTRMR--APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  341 (353)
T ss_dssp             HHHTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHcCCCCC--CCccCCHHHHHHHHHHcCcChhHCcCHHHHHHH
Confidence            33332222  234689999999999999999999999999876

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=100.00  E-value=1.8e-39  Score=309.72  Aligned_cols=185  Identities=35%  Similarity=0.613  Sum_probs=166.2

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||+||+|.+++...  +.+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++
T Consensus        87 ~~~~lv~e~~~~~~L~~~l~~~--~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~---~~~~~kl~DFG~a  161 (328)
T 3fe3_A           87 KTLYLIMEYASGGEVFDYLVAH--GRMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLD---ADMNIKIADFGFS  161 (328)
T ss_dssp             SEEEEEECCCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSCEEECSTTCC
T ss_pred             CEEEEEEECCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEc---CCCCEEEeeccCc
Confidence            3457899999999999999765  6799999999999999999999999999999999999998   5789999999999


Q ss_pred             eeccCCCcccccccCCcccccccccCCC--CCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      ............+||+.|+|||++.+..  +.++||||+||++|+|++|+.||.+.+.......+..+...++.    .+
T Consensus       162 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p~----~~  237 (328)
T 3fe3_A          162 NEFTVGGKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRGKYRIPF----YM  237 (328)
T ss_dssp             GGGSSSCGGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT----TS
T ss_pred             eecCCCCccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCC----CC
Confidence            8877666667788999999999987543  47899999999999999999999999999999888888765543    57


Q ss_pred             CHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                      ++++.+||.+||+.||.+|||++++++||||+....
T Consensus       238 s~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~~  273 (328)
T 3fe3_A          238 STDCENLLKRFLVLNPIKRGTLEQIMKDRWINAGHE  273 (328)
T ss_dssp             CHHHHHHHHHHCCSSTTTSCCHHHHTTCTTTTTTCT
T ss_pred             CHHHHHHHHHHCCCChhHCcCHHHHhcCHhhcCCCc
Confidence            999999999999999999999999999999987543

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=100.00  E-value=9.3e-40  Score=315.48  Aligned_cols=189  Identities=37%  Similarity=0.640  Sum_probs=168.8

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecC-CCCCEEEeecccc
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK-EDSSLKATDFGLS  116 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~-~~~~~kL~Dfg~a  116 (429)
                      ..|+|||||.||+|.+++..  .+.+++..+..++.||+.||.|||++||+||||||+||+++..+ ....+||+|||++
T Consensus        89 ~~~lv~e~~~gg~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a  166 (361)
T 2yab_A           89 DVVLILELVSGGELFDFLAQ--KESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA  166 (361)
T ss_dssp             EEEEEEECCCSCBHHHHHTT--CSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSC
T ss_pred             EEEEEEEcCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCc
Confidence            45789999999999999944  46899999999999999999999999999999999999998421 1127999999999


Q ss_pred             eeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          117 DFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       117 ~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      ............+||+.|+|||++.+ .++.++||||+||++|+|++|.+||.+.+..+....+......++...++.++
T Consensus       167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s  246 (361)
T 2yab_A          167 HEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTS  246 (361)
T ss_dssp             EECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTSC
T ss_pred             eEcCCCCccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCCchhccCCC
Confidence            98776666667789999999999875 56899999999999999999999999999999999999888777766677899


Q ss_pred             HHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          196 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      +.+++||.+||..||.+|||+.++++||||+..
T Consensus       247 ~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~  279 (361)
T 2yab_A          247 ELAKDFIRKLLVKETRKRLTIQEALRHPWITPV  279 (361)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHHTSTTTSCS
T ss_pred             HHHHHHHHHHCCCChhHCcCHHHHhcCcCcCCC
Confidence            999999999999999999999999999999864

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=100.00  E-value=7.1e-40  Score=315.69  Aligned_cols=224  Identities=31%  Similarity=0.546  Sum_probs=175.7

Q ss_pred             cceeEeeecCCCChHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           38 RKLRRIRLCEGGELLDRILAKK--DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      ..|+|||||+||+|.+++....  +..+++..+..++.||+.||.|||++||+||||||+||+++..+....+||+|||+
T Consensus       100 ~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~  179 (351)
T 3c0i_A          100 MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGV  179 (351)
T ss_dssp             EEEEEEECCSSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTT
T ss_pred             EEEEEEeCCCCCCHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcc
Confidence            4578999999999998886542  34589999999999999999999999999999999999998654556799999999


Q ss_pred             ceeccCCCc-ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          116 SDFIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       116 a~~~~~~~~-~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      +........ .....||+.|+|||++.+ .++.++||||+||++|+|++|..||.+. .......+..+...+....++.
T Consensus       180 a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~-~~~~~~~i~~~~~~~~~~~~~~  258 (351)
T 3c0i_A          180 AIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPFYGT-KERLFEGIIKGKYKMNPRQWSH  258 (351)
T ss_dssp             CEECCTTSCBCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCSS-HHHHHHHHHHTCCCCCHHHHTT
T ss_pred             eeEecCCCeeecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHCCCCCCCc-HHHHHHHHHcCCCCCCcccccc
Confidence            987765433 345689999999999875 4689999999999999999999999875 4556667777766665555667


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCCCCCCcChHHHHhhHHhhhhhHHHHHHHHhhh
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALA  262 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~  262 (429)
                      ++..+++||.+||+.||.+|||+.++++||||+..............+..++.+....+++..++..+.
T Consensus       259 ~s~~~~~li~~~L~~dP~~R~s~~e~l~hp~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  327 (351)
T 3c0i_A          259 ISESAKDLVRRMLMLDPAERITVYEALNHPWLKERDRYAYKIHLPETVEQLRKFNARRKLKGAVLAAVS  327 (351)
T ss_dssp             SCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTHHHHSCCSCCHHHHHHHHHHHHHHC----------
T ss_pred             CCHHHHHHHHHHCCCChhHCcCHHHHhcChhhcCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            899999999999999999999999999999998754322222233456677777777777766555443

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=100.00  E-value=8.5e-39  Score=307.86  Aligned_cols=221  Identities=41%  Similarity=0.701  Sum_probs=174.4

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++...  +.+++..+..++.||+.||.|||++||+||||||+||+++....++.+||+|||++.
T Consensus       122 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~  199 (349)
T 2w4o_A          122 EISLVLELVTGGELFDRIVEK--GYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSK  199 (349)
T ss_dssp             EEEEEECCCCSCBHHHHHTTC--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC---
T ss_pred             eEEEEEEeCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCcccc
Confidence            457899999999999998543  679999999999999999999999999999999999999854457899999999998


Q ss_pred             eccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhH-HHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDG-IFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      ............||+.|+|||++.+ .++.++||||+||++|+|++|..||.+..... ....+......+..+.++.++
T Consensus       200 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  279 (349)
T 2w4o_A          200 IVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILNCEYYFISPWWDEVS  279 (349)
T ss_dssp             -------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHTTCCCCCTTTTTTSC
T ss_pred             ccCcccccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHhCCCccCCchhhhCC
Confidence            7765555556789999999999875 46899999999999999999999998766554 566777776666666677899


Q ss_pred             HHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCCCCCCcChHHHHhhHHhhhhhHHHHHHHHhhh
Q 014171          196 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALA  262 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~  262 (429)
                      .++++||.+||+.||.+|||+.++++||||+.......  ........++++....++++.......
T Consensus       280 ~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~  344 (349)
T 2w4o_A          280 LNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAANFV--HMDTAQKKLQEFNARRKLKAAVKAVVA  344 (349)
T ss_dssp             HHHHHHHHTTSCSSGGGSCCHHHHHHSTTTTSTTCCCS--CCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCChhhCcCHHHHhcCcccCCCccchh--hhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999997654322  233556677888888888877766544

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.1e-40  Score=314.25  Aligned_cols=190  Identities=30%  Similarity=0.592  Sum_probs=170.2

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||+||+|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++.. .++.+||+|||++.
T Consensus        75 ~~~lv~e~~~g~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~-~~~~~kl~Dfg~a~  152 (321)
T 1tki_A           75 ELVMIFEFISGLDIFERINTS-AFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTR-RSSTIKIIEFGQAR  152 (321)
T ss_dssp             EEEEEECCCCCCBHHHHHTSS-SCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSS-SCCCEEECCCTTCE
T ss_pred             EEEEEEEeCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccC-CCCCEEEEECCCCe
Confidence            356899999999999988443 3579999999999999999999999999999999999999842 26889999999999


Q ss_pred             eccCCCcccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCH
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN  196 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  196 (429)
                      ............||+.|+|||++.+. ++.++||||+||++|+|++|..||.+.+.......+......++...++.++.
T Consensus       153 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~  232 (321)
T 1tki_A          153 QLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDEEAFKEISI  232 (321)
T ss_dssp             ECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCCHHHHTTSCH
T ss_pred             ECCCCCccccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCCCChhhhccCCH
Confidence            88766666667899999999999765 48899999999999999999999999999999999998888777666778999


Q ss_pred             HHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          197 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       197 ~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      ++++||.+||..||.+|||+.++++||||+...
T Consensus       233 ~~~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~  265 (321)
T 1tki_A          233 EAMDFVDRLLVKERKSRMTASEALQHPWLKQKI  265 (321)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSCG
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHhcChhhccCc
Confidence            999999999999999999999999999998754

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=100.00  E-value=1.4e-39  Score=318.93  Aligned_cols=192  Identities=33%  Similarity=0.635  Sum_probs=158.9

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|||||.||+|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++....++.+||+|||+++.
T Consensus       134 ~~lv~E~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~  213 (400)
T 1nxk_A          134 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE  213 (400)
T ss_dssp             EEEEEECCCSEEHHHHHHCC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred             EEEEEEeCCCCcHHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccc
Confidence            46899999999999999766555799999999999999999999999999999999999999644478999999999987


Q ss_pred             ccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChh----HHHHHHHhcCCCCCCCCCCC
Q 014171          119 IKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED----GIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       119 ~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~----~~~~~i~~~~~~~~~~~~~~  193 (429)
                      ..........+||+.|+|||++.+ .++.++||||+||++|+|++|..||.+....    .....+..+...++...+..
T Consensus       214 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  293 (400)
T 1nxk_A          214 TTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSE  293 (400)
T ss_dssp             CC-----------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCSCCCCTTCSSCCSHHHHHHHTCCCCCTTTTTT
T ss_pred             cCCCCccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCCCCCCccccccHHHHHHHHcCcccCCCccccc
Confidence            765555567789999999999864 5688999999999999999999999776543    35566777777777777788


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                      ++.++++||.+||+.||.+|||+.++++||||.....
T Consensus       294 ~s~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~~~  330 (400)
T 1nxk_A          294 VSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTK  330 (400)
T ss_dssp             SCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHTTTT
T ss_pred             CCHHHHHHHHHHCCCChhHCcCHHHHhcCccccCCCC
Confidence            9999999999999999999999999999999987543

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=100.00  E-value=1.5e-39  Score=314.49  Aligned_cols=187  Identities=31%  Similarity=0.505  Sum_probs=142.0

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++...  +.+++..+..++.||+.||.|||++||+||||||+||+++.. ..+.+||+|||+|+
T Consensus        90 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~-~~~~~kl~Dfg~a~  166 (361)
T 3uc3_A           90 HLAIIMEYASGGELYERICNA--GRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGS-PAPRLKICDFGYSK  166 (361)
T ss_dssp             EEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSS-SSCCEEECCCCCC-
T ss_pred             EEEEEEEeCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCC-CCceEEEeecCccc
Confidence            356899999999999999665  579999999999999999999999999999999999999842 23459999999998


Q ss_pred             eccCCCcccccccCCcccccccccCC-CC-CCcchHHHHHHHHHHhhCCCCCCCCChh----HHHHHHHhcCCCCCCCCC
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKRK-SG-PESDVWSIGVITYILLCGRRPFWDKTED----GIFKEVLRNKPDFRRKPW  191 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~~-~~-~~~DiwslG~il~~l~~g~~pf~~~~~~----~~~~~i~~~~~~~~~~~~  191 (429)
                      ............||+.|+|||++.+. ++ .++||||+||++|+|++|+.||.+....    .....+......++  ..
T Consensus       167 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~--~~  244 (361)
T 3uc3_A          167 SSVLHSQPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRILSVKYSIP--DD  244 (361)
T ss_dssp             --------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC----CCCHHHHHHHHHTTCCCCC--TT
T ss_pred             cccccCCCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhcCCCCCC--Cc
Confidence            65544445566899999999998653 33 4489999999999999999999875543    33444444444333  23


Q ss_pred             CCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          192 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       192 ~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      ..+++.+++||.+||+.||.+|||+.++++||||....
T Consensus       245 ~~~s~~~~~li~~~L~~dP~~Rps~~ell~hp~f~~~~  282 (361)
T 3uc3_A          245 IRISPECCHLISRIFVADPATRISIPEIKTHSWFLKNL  282 (361)
T ss_dssp             SCCCHHHHHHHHHHSCSCTTTSCCHHHHHTSHHHHTTC
T ss_pred             CCCCHHHHHHHHHHccCChhHCcCHHHHHhCcchhcCC
Confidence            46899999999999999999999999999999997653

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=100.00  E-value=3.1e-38  Score=302.07  Aligned_cols=182  Identities=31%  Similarity=0.552  Sum_probs=162.0

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++.+.  +.+++..++.++.||+.||.|||++||+||||||+||+++   .++.+||+|||+++
T Consensus        79 ~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~g~vkL~DFG~a~  153 (337)
T 1o6l_A           79 RLCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDFGLCK  153 (337)
T ss_dssp             EEEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEECCCTTCB
T ss_pred             EEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEEC---CCCCEEEeeccchh
Confidence            457899999999999998655  6899999999999999999999999999999999999998   57899999999998


Q ss_pred             ecc-CCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~-~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      ... ........+||+.|+|||++.+ .++.++|+||+||++|+|++|+.||.+.+.......+......++    ..++
T Consensus       154 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s  229 (337)
T 1o6l_A          154 EGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP----RTLS  229 (337)
T ss_dssp             CSCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSC
T ss_pred             hcccCCCcccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCC----CCCC
Confidence            643 3334456789999999999875 468999999999999999999999999988888888888766554    3589


Q ss_pred             HHHHHHHHHhccCCccCcC-----CHHHHhCCCccccC
Q 014171          196 NSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG  228 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~-----s~~e~l~h~~~~~~  228 (429)
                      +++++||.+||+.||.+||     +++++++||||+..
T Consensus       230 ~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h~~f~~~  267 (337)
T 1o6l_A          230 PEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             HHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcCCCcCCC
Confidence            9999999999999999999     89999999999864

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=100.00  E-value=2.2e-38  Score=308.57  Aligned_cols=192  Identities=36%  Similarity=0.626  Sum_probs=169.8

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++.. ..+.+||+|||++.
T Consensus       122 ~~~lv~E~~~gg~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~-~~~~vkL~DFG~a~  199 (387)
T 1kob_A          122 EMVLILEFLSGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETK-KASSVKIIDFGLAT  199 (387)
T ss_dssp             EEEEEEECCCCCBHHHHTTCT-TCCBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESST-TCCCEEECCCTTCE
T ss_pred             EEEEEEEcCCCCcHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecC-CCCceEEEecccce
Confidence            357899999999999988543 3579999999999999999999999999999999999999742 34689999999999


Q ss_pred             eccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCH
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN  196 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  196 (429)
                      ............||+.|+|||++.+ .++.++||||+||++|+|++|..||.+.+.......+......++...+..+++
T Consensus       200 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~  279 (387)
T 1kob_A          200 KLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSP  279 (387)
T ss_dssp             ECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCH
T ss_pred             ecCCCcceeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCccccccCCH
Confidence            8776655566689999999999875 458899999999999999999999999988888888888887777777788999


Q ss_pred             HHHHHHHHhccCCccCcCCHHHHhCCCccccCCCC
Q 014171          197 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA  231 (429)
Q Consensus       197 ~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~  231 (429)
                      ++++||.+||+.||.+|||+.++++||||+.....
T Consensus       280 ~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~  314 (387)
T 1kob_A          280 EAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHSN  314 (387)
T ss_dssp             HHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCCTT
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHhhCccccCCccc
Confidence            99999999999999999999999999999976543

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=100.00  E-value=8e-39  Score=297.88  Aligned_cols=191  Identities=41%  Similarity=0.772  Sum_probs=171.8

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++...  ..+++..+..++.|++.||.|||++||+||||||+||++...+.++.++|+|||.+.
T Consensus        80 ~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~  157 (277)
T 3f3z_A           80 DIYLVMELCTGGELFERVVHK--RVFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAA  157 (277)
T ss_dssp             EEEEEEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCE
T ss_pred             eEEEEEeccCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccce
Confidence            357899999999999999765  579999999999999999999999999999999999999543467899999999998


Q ss_pred             eccCCCcccccccCCcccccccccCCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHH
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS  197 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  197 (429)
                      ............||+.|+|||++.+.++.++||||+|+++|+|++|+.||.+.........+..+...++...+..+++.
T Consensus       158 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  237 (277)
T 3f3z_A          158 RFKPGKMMRTKVGTPYYVSPQVLEGLYGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREGTFTFPEKDWLNVSPQ  237 (277)
T ss_dssp             ECCTTSCBCCCCSCTTTCCHHHHTTCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCHHHHTTSCHH
T ss_pred             eccCccchhccCCCCCccChHHhcccCCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCchhhhcCCHH
Confidence            87766666677899999999999888899999999999999999999999999988888888888777666555678999


Q ss_pred             HHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          198 AKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       198 ~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                      +.++|.+||+.||.+|||+.++++||||++...
T Consensus       238 ~~~li~~~l~~dp~~R~s~~~~l~h~~~~~~~~  270 (277)
T 3f3z_A          238 AESLIRRLLTKSPKQRITSLQALEHEWFEKQLS  270 (277)
T ss_dssp             HHHHHHHHTCSSTTTSCCHHHHTTSHHHHHHHC
T ss_pred             HHHHHHHHccCChhhCcCHHHHhcCHHHhcccc
Confidence            999999999999999999999999999987544

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=100.00  E-value=1.2e-38  Score=304.08  Aligned_cols=190  Identities=36%  Similarity=0.646  Sum_probs=166.7

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecC-CCCCEEEeeccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK-EDSSLKATDFGL  115 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~-~~~~~kL~Dfg~  115 (429)
                      ...|+|||||.||+|.+++..  .+.+++..+..++.||+.||.|||++||+||||||+||+++..+ ....+||+|||+
T Consensus        87 ~~~~lv~e~~~~~~L~~~l~~--~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~  164 (326)
T 2y0a_A           87 TDVILILELVAGGELFDFLAE--KESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL  164 (326)
T ss_dssp             SEEEEEEECCCSCBHHHHHTT--SSCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTT
T ss_pred             CEEEEEEEcCCCCCHHHHHHh--cCCcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCC
Confidence            345789999999999999844  36799999999999999999999999999999999999998422 223799999999


Q ss_pred             ceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          116 SDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       116 a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      +.............||+.|+|||++.+ .++.++||||+||++|+|++|..||.+.+.......+......++...++.+
T Consensus       165 a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (326)
T 2y0a_A          165 AHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT  244 (326)
T ss_dssp             CEECCTTSCCCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHTCCCCCHHHHTTS
T ss_pred             CeECCCCCccccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHhcCCCcCccccccC
Confidence            988765555566789999999999874 5688999999999999999999999999888888888877766665555678


Q ss_pred             CHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      +..+++||.+||+.||.+|||+.++++||||+..
T Consensus       245 ~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~  278 (326)
T 2y0a_A          245 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK  278 (326)
T ss_dssp             CHHHHHHHHHHSCSSGGGSCCHHHHHHSTTTSCC
T ss_pred             CHHHHHHHHHHccCChhhCCCHHHHhcCCCccCC
Confidence            9999999999999999999999999999999865

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=100.00  E-value=6.8e-39  Score=313.55  Aligned_cols=216  Identities=25%  Similarity=0.332  Sum_probs=167.5

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHL   84 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~l~~~~~~~i~~qil~aL~~lH~   84 (429)
                      +.++|+|++.+..++...........      .|+|||||.++ +...+..  .....+++..++.++.||+.||.|||+
T Consensus        87 ~~l~h~niv~l~~~~~~~~~~~~~~~------~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~  159 (394)
T 4e7w_A           87 RIVKHPNVVDLKAFFYSNGDKKDEVF------LNLVLEYVPET-VYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS  159 (394)
T ss_dssp             HTCCCTTBCCEEEEEEEESSSSSCEE------EEEEEECCSEE-HHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhCCCCCcceEEEEEEecCCCCCceE------EEEEeeccCcc-HHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            44566776666665543222222222      35799999865 4444432  234689999999999999999999999


Q ss_pred             CCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhh
Q 014171           85 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC  162 (429)
Q Consensus        85 ~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~  162 (429)
                      +||+||||||+||+++.  .++.+||+|||+|+............||+.|+|||++.+  .++.++||||+||++|+|++
T Consensus       160 ~~ivHrDlkp~Nill~~--~~~~~kL~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~  237 (394)
T 4e7w_A          160 IGICHRDIKPQNLLLDP--PSGVLKLIDFGSAKILIAGEPNVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQ  237 (394)
T ss_dssp             TTEECSCCSGGGEEEET--TTTEEEECCCTTCEECCTTCCCCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH
T ss_pred             CCccCCCCCHHHEEEcC--CCCcEEEeeCCCcccccCCCCCcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHh
Confidence            99999999999999983  478899999999988766666667789999999999864  46899999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHhcC-----------------CCCCC---C-----CCCCCCHHHHHHHHHhccCCccCcCCHH
Q 014171          163 GRRPFWDKTEDGIFKEVLRNK-----------------PDFRR---K-----PWPSISNSAKDFVKKLLVKDPRARLTAA  217 (429)
Q Consensus       163 g~~pf~~~~~~~~~~~i~~~~-----------------~~~~~---~-----~~~~~~~~~~~li~~~l~~dp~~R~s~~  217 (429)
                      |+.||.+.+.......+....                 ..++.   .     ..+.+++++.+||.+||+.||.+|||+.
T Consensus       238 g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~  317 (394)
T 4e7w_A          238 GQPLFPGESGIDQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARLTAI  317 (394)
T ss_dssp             SSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCChhhCCCHH
Confidence            999999988777666554321                 00110   0     1234789999999999999999999999


Q ss_pred             HHhCCCccccCCCC
Q 014171          218 QALSHPWVREGGDA  231 (429)
Q Consensus       218 e~l~h~~~~~~~~~  231 (429)
                      ++++||||++....
T Consensus       318 e~l~hp~f~~~~~~  331 (394)
T 4e7w_A          318 EALCHPFFDELRTG  331 (394)
T ss_dssp             HHHTSGGGSTTTSS
T ss_pred             HHhcChhhhhhccc
Confidence            99999999986543

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=100.00  E-value=1.3e-38  Score=306.69  Aligned_cols=182  Identities=29%  Similarity=0.555  Sum_probs=158.4

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++.+.  +.+++..++.++.||+.||.|||++||+||||||+|||++   .++++||+|||+|+
T Consensus        98 ~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~---~~g~ikL~DFG~a~  172 (353)
T 3txo_A           98 RLFFVMEFVNGGDLMFHIQKS--RRFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLD---HEGHCKLADFGMCK  172 (353)
T ss_dssp             EEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEECCCTTCB
T ss_pred             EEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEEC---CCCCEEEcccccee
Confidence            357899999999999999665  6799999999999999999999999999999999999998   57899999999998


Q ss_pred             ecc-CCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~-~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      ... ........+||+.|+|||++.+ .++.++|+||+||++|+|++|+.||.+.+..+....+......++.    .++
T Consensus       173 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p~----~~~  248 (353)
T 3txo_A          173 EGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVVYPT----WLH  248 (353)
T ss_dssp             CSCC---------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCT----TSC
T ss_pred             ecccCCccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCC----CCC
Confidence            643 2333456789999999999864 5789999999999999999999999999999999999988766553    589


Q ss_pred             HHHHHHHHHhccCCccCcCCH------HHHhCCCccccC
Q 014171          196 NSAKDFVKKLLVKDPRARLTA------AQALSHPWVREG  228 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~------~e~l~h~~~~~~  228 (429)
                      ..+++||.+||+.||.+||++      +++++||||+..
T Consensus       249 ~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~hp~f~~~  287 (353)
T 3txo_A          249 EDATGILKSFMTKNPTMRLGSLTQGGEHAILRHPFFKEI  287 (353)
T ss_dssp             HHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHhhhCHHHccCCcccCCHHHHhhCCcccCC
Confidence            999999999999999999998      899999999875

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=100.00  E-value=2.3e-38  Score=295.80  Aligned_cols=192  Identities=34%  Similarity=0.697  Sum_probs=173.0

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+.+...  ..+++..+..++.|++.||.|||++||+||||||+||+++..+..+.+||+|||.+.
T Consensus        79 ~~~~v~e~~~~~~l~~~~~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~  156 (284)
T 3kk8_A           79 FHYLVFDLVTGGELFEDIVAR--EFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAI  156 (284)
T ss_dssp             EEEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCE
T ss_pred             EEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeE
Confidence            347899999999999999765  679999999999999999999999999999999999999865555679999999998


Q ss_pred             eccCCCcccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCH
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN  196 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  196 (429)
                      ............|++.|+|||++.+. ++.++||||+|+++|+|++|..||.+.........+..+...++.+.+..+++
T Consensus       157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (284)
T 3kk8_A          157 EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDTVTP  236 (284)
T ss_dssp             ECCSSCBCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCH
T ss_pred             EcccCccccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhccccCCchhhcccCH
Confidence            87766666667899999999998754 58899999999999999999999999999999999988888888777788999


Q ss_pred             HHHHHHHHhccCCccCcCCHHHHhCCCccccCCCC
Q 014171          197 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA  231 (429)
Q Consensus       197 ~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~  231 (429)
                      .+.+||.+||+.||.+|||++++++||||++....
T Consensus       237 ~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~~~  271 (284)
T 3kk8_A          237 EAKSLIDSMLTVNPKKRITADQALKVPWICNRERV  271 (284)
T ss_dssp             HHHHHHHHHSCSSTTTSCCHHHHTTSHHHHSCCCG
T ss_pred             HHHHHHHHHcccChhhCCCHHHHhcCccccCChhH
Confidence            99999999999999999999999999999986543

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=100.00  E-value=6.7e-39  Score=301.76  Aligned_cols=201  Identities=20%  Similarity=0.187  Sum_probs=146.4

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH-   85 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~-   85 (429)
                      ..++|+|++.+++.+.....  .      ....|||||||+||+|.+++...   .+++..+..++.|++.||.|||++ 
T Consensus        52 ~~l~HpNIv~l~g~~~~~~~--~------~~~~~lV~Ey~~~gsL~~~l~~~---~l~~~~~~~i~~~ia~gl~ylH~~~  120 (303)
T 3hmm_A           52 VMLRHENILGFIAADNKDNG--T------WTQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEI  120 (303)
T ss_dssp             TTCCCTTBCCEEEEEEEECS--S------SEEEEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCB
T ss_pred             hcCCCCCCCcEEEEEEecCC--C------ceEEEEEecCCCCCcHHHHHHhC---CCCHHHHHHHHHHHHHHHHHHHHhh
Confidence            35677777777776543110  0      11246899999999999999543   699999999999999999999987 


Q ss_pred             -------CCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc-----ccccccCCcccccccccCC-------CCC
Q 014171           86 -------GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-----FQDIVGSAYYVAPEVLKRK-------SGP  146 (429)
Q Consensus        86 -------~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~-----~~~~~g~~~y~aPE~~~~~-------~~~  146 (429)
                             +|+||||||+|||++   .++.+||+|||+|+.......     ....+||+.|+|||++.+.       ++.
T Consensus       121 ~~~~~~~~IiHRDlKp~NILl~---~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~  197 (303)
T 3hmm_A          121 VGTQGKPAIAHRDLKSKNILVK---KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFK  197 (303)
T ss_dssp             CSTTCBCCEECSCCCGGGEEEC---TTSCEEECCCTTCEEEETTTTEESCC-----CCGGGCCHHHHTTCSCTTCHHHHH
T ss_pred             hhccCCCCEeeccCCcccEEEC---CCCCEEEEeCCCCccccCCCCceeeecccccccccccCHHHhcccccccCCccCh
Confidence                   999999999999998   578999999999987654332     2345799999999998653       366


Q ss_pred             CcchHHHHHHHHHHhhCCCCCCCCC---------------hhHHHHHHHhcCCCCCCCC-CC--CCCHHHHHHHHHhccC
Q 014171          147 ESDVWSIGVITYILLCGRRPFWDKT---------------EDGIFKEVLRNKPDFRRKP-WP--SISNSAKDFVKKLLVK  208 (429)
Q Consensus       147 ~~DiwslG~il~~l~~g~~pf~~~~---------------~~~~~~~i~~~~~~~~~~~-~~--~~~~~~~~li~~~l~~  208 (429)
                      ++||||+||++|||+||.+||....               .......+.........+. +.  ..+..+.+|+.+||+.
T Consensus       198 k~DVwS~Gvvl~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~  277 (303)
T 3hmm_A          198 RADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYA  277 (303)
T ss_dssp             HHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCS
T ss_pred             hHhhhhHHHHHHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHccc
Confidence            8999999999999999977653211               1222333333322111110 11  1234688999999999


Q ss_pred             CccCcCCHHHHhC
Q 014171          209 DPRARLTAAQALS  221 (429)
Q Consensus       209 dp~~R~s~~e~l~  221 (429)
                      ||.+|||+.++++
T Consensus       278 dP~~RPt~~ei~~  290 (303)
T 3hmm_A          278 NGAARLTALRIKK  290 (303)
T ss_dssp             SGGGSCCHHHHHH
T ss_pred             CHhHCcCHHHHHH
Confidence            9999999999874

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=100.00  E-value=7e-38  Score=292.93  Aligned_cols=188  Identities=35%  Similarity=0.653  Sum_probs=158.0

Q ss_pred             ceeEeeecCCCChHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           39 KLRRIRLCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      .|+|||||.||+|.+++...  .+..+++..+..++.||+.||.|||++||+||||||+||+++.....+.+||+|||++
T Consensus        95 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a  174 (285)
T 3is5_A           95 MYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLA  174 (285)
T ss_dssp             EEEEECCCSCCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCC
T ss_pred             EEEEEEeCCCCcHHHHHHhhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecc
Confidence            47899999999999998654  3467999999999999999999999999999999999999975445688999999999


Q ss_pred             eeccCCCcccccccCCcccccccccCCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCH
Q 014171          117 DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN  196 (429)
Q Consensus       117 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  196 (429)
                      .............|++.|+|||++.+.++.++||||+|+++|+|++|+.||.+.+.......+......+... ...+++
T Consensus       175 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~  253 (285)
T 3is5_A          175 ELFKSDEHSTNAAGTALYMAPEVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATYKEPNYAVE-CRPLTP  253 (285)
T ss_dssp             CC----------CTTGGGCCHHHHTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCC---CCCCH
T ss_pred             eecCCcccCcCcccccCcCChHHhccCCCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhhhccCCcccccc-cCcCCH
Confidence            8776655556678999999999998888999999999999999999999999988888877777666554432 234789


Q ss_pred             HHHHHHHHhccCCccCcCCHHHHhCCCcccc
Q 014171          197 SAKDFVKKLLVKDPRARLTAAQALSHPWVRE  227 (429)
Q Consensus       197 ~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~  227 (429)
                      .+.+||.+||+.||.+|||+.++++||||++
T Consensus       254 ~~~~li~~~L~~dP~~Rps~~e~l~hp~f~~  284 (285)
T 3is5_A          254 QAVDLLKQMLTKDPERRPSAAQVLHHEWFKQ  284 (285)
T ss_dssp             HHHHHHHHHTCSCTTTSCCHHHHHTSGGGGC
T ss_pred             HHHHHHHHHccCChhhCcCHHHHhcCHHhhc
Confidence            9999999999999999999999999999985

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=100.00  E-value=1.8e-38  Score=310.97  Aligned_cols=186  Identities=26%  Similarity=0.447  Sum_probs=162.2

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||+||+|.+++..   ..+++..++.++.||+.||.|||++||+||||||+|||++   .++++||+|||+|.
T Consensus       143 ~~~lV~E~~~gg~L~~~l~~---~~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~---~~g~ikL~DFG~a~  216 (410)
T 3v8s_A          143 YLYMVMEYMPGGDLVNLMSN---YDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLD---KSGHLKLADFGTCM  216 (410)
T ss_dssp             EEEEEECCCTTEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTCE
T ss_pred             EEEEEEeCCCCCcHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeEC---CCCCEEEeccceeE
Confidence            35789999999999998854   3699999999999999999999999999999999999998   57899999999998


Q ss_pred             eccCCCc--ccccccCCcccccccccCC-----CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCC
Q 014171          118 FIKPGKK--FQDIVGSAYYVAPEVLKRK-----SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP  190 (429)
Q Consensus       118 ~~~~~~~--~~~~~g~~~y~aPE~~~~~-----~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  190 (429)
                      .......  ..+.+||+.|+|||++.+.     ++.++||||+||++|+|++|++||.+.+.......+......+..+.
T Consensus       217 ~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~p~  296 (410)
T 3v8s_A          217 KMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPD  296 (410)
T ss_dssp             ECCTTSEEECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCCT
T ss_pred             eeccCCcccccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhccccccCCC
Confidence            7654432  3467899999999998643     57899999999999999999999999999999888887643334444


Q ss_pred             CCCCCHHHHHHHHHhccCCccC--cCCHHHHhCCCccccCC
Q 014171          191 WPSISNSAKDFVKKLLVKDPRA--RLTAAQALSHPWVREGG  229 (429)
Q Consensus       191 ~~~~~~~~~~li~~~l~~dp~~--R~s~~e~l~h~~~~~~~  229 (429)
                      +..++.++++||.+||..+|.+  |++++++++||||+...
T Consensus       297 ~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~Hp~f~~~~  337 (410)
T 3v8s_A          297 DNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHLFFKNDQ  337 (410)
T ss_dssp             TCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTSGGGCCSS
T ss_pred             cccccHHHHHHHHHHccChhhhCCCCCHHHHhcCccccCCC
Confidence            5578999999999999999988  99999999999999764

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=100.00  E-value=2.1e-38  Score=304.00  Aligned_cols=189  Identities=35%  Similarity=0.621  Sum_probs=163.8

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecC-CCCCEEEeecccc
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK-EDSSLKATDFGLS  116 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~-~~~~~kL~Dfg~a  116 (429)
                      ..|+|||||.||+|.+++.+.  +.+++..+..++.||+.||.|||++||+||||||+||++.... ..+.+||+|||++
T Consensus        90 ~~~lv~E~~~gg~L~~~i~~~--~~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a  167 (342)
T 2qr7_A           90 YVYVVTELMKGGELLDKILRQ--KFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFA  167 (342)
T ss_dssp             EEEEEECCCCSCBHHHHHHTC--TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTC
T ss_pred             EEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCc
Confidence            357899999999999999654  6799999999999999999999999999999999999986421 2346999999999


Q ss_pred             eeccCC-CcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCC---CChhHHHHHHHhcCCCCCCCCC
Q 014171          117 DFIKPG-KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWD---KTEDGIFKEVLRNKPDFRRKPW  191 (429)
Q Consensus       117 ~~~~~~-~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~---~~~~~~~~~i~~~~~~~~~~~~  191 (429)
                      ...... ......+||+.|+|||++.+ .++.++||||+||++|+|++|..||.+   .+..+....+..+...++...|
T Consensus       168 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~~~~~~~~~  247 (342)
T 2qr7_A          168 KQLRAENGLLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGSGKFSLSGGYW  247 (342)
T ss_dssp             EECBCTTCCBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHHCCCCCCSTTT
T ss_pred             ccCcCCCCceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHccCCcccCcccc
Confidence            876543 33456688999999999875 368899999999999999999999976   3556677888888887777778


Q ss_pred             CCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          192 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       192 ~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      +.+++++++||.+||..||.+|||+.++++||||...
T Consensus       248 ~~~s~~~~~li~~~L~~dP~~R~t~~~il~hp~~~~~  284 (342)
T 2qr7_A          248 NSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWIVHW  284 (342)
T ss_dssp             TTSCHHHHHHHHHHTCSSTTTSCCHHHHTTSHHHHTG
T ss_pred             ccCCHHHHHHHHHHCCCChhHCcCHHHHhcCCeecCc
Confidence            8899999999999999999999999999999999764

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=100.00  E-value=1.3e-37  Score=295.61  Aligned_cols=180  Identities=27%  Similarity=0.556  Sum_probs=161.0

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++.+.  +.+++..++.++.||+.||.|||++||+||||||+||+++   .++.+||+|||++.
T Consensus        80 ~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~g~~kL~Dfg~a~  154 (318)
T 1fot_A           80 QIFMIMDYIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLD---KNGHIKITDFGFAK  154 (318)
T ss_dssp             EEEEEECCCCSCBHHHHHHHT--SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEEC---TTSCEEECCCSSCE
T ss_pred             EEEEEEeCCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEc---CCCCEEEeecCcce
Confidence            356899999999999999654  6799999999999999999999999999999999999998   57899999999998


Q ss_pred             eccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCH
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN  196 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  196 (429)
                      ....  .....+||+.|+|||++.+ .++.++|+||+||++|+|++|+.||.+.+.......+......++    +.+++
T Consensus       155 ~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~p----~~~~~  228 (318)
T 1fot_A          155 YVPD--VTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAELRFP----PFFNE  228 (318)
T ss_dssp             ECSS--CBCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCCCCCC----TTSCH
T ss_pred             ecCC--ccccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCC----CCCCH
Confidence            7643  2345689999999999875 468899999999999999999999999998888888888776554    35799


Q ss_pred             HHHHHHHHhccCCccCcC-----CHHHHhCCCccccC
Q 014171          197 SAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG  228 (429)
Q Consensus       197 ~~~~li~~~l~~dp~~R~-----s~~e~l~h~~~~~~  228 (429)
                      +++++|.+||..||.+||     +++++++||||+..
T Consensus       229 ~~~~li~~lL~~dp~~R~~~~~~~~~~i~~hp~f~~~  265 (318)
T 1fot_A          229 DVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV  265 (318)
T ss_dssp             HHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred             HHHHHHHHHhccCHHHcCCCcCCCHHHHhcCccccCC
Confidence            999999999999999999     89999999999864

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=100.00  E-value=8.4e-38  Score=294.20  Aligned_cols=186  Identities=28%  Similarity=0.474  Sum_probs=158.4

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++...   .+++..+..++.|++.||.|||++||+||||||+||+++   .++.+||+|||++.
T Consensus        91 ~~~lv~e~~~~~~L~~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~---~~~~~kl~Dfg~~~  164 (297)
T 3fxz_A           91 ELWVVMEYLAGGSLTDVVTET---CMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGFCA  164 (297)
T ss_dssp             EEEEEEECCTTCBHHHHHHHS---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTCE
T ss_pred             EEEEEEECCCCCCHHHHHhhc---CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEC---CCCCEEEeeCCCce
Confidence            357899999999999988543   699999999999999999999999999999999999998   57899999999998


Q ss_pred             eccCCC-cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~~~~-~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      ...... ......||+.|+|||++.+ .++.++||||+||++|+|++|..||.+.........+...... .......++
T Consensus       165 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~  243 (297)
T 3fxz_A          165 QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP-ELQNPEKLS  243 (297)
T ss_dssp             ECCSTTCCBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSC-CCSCGGGSC
T ss_pred             ecCCcccccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCC-CCCCccccC
Confidence            765433 3355689999999999865 4689999999999999999999999888877766655544322 112235689


Q ss_pred             HHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          196 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                      ..+++||.+||+.||.+|||++++++||||+....
T Consensus       244 ~~~~~li~~~l~~dp~~Rps~~ell~h~~~~~~~~  278 (297)
T 3fxz_A          244 AIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKP  278 (297)
T ss_dssp             HHHHHHHHHHSCSSTTTSCCHHHHTTCGGGGGCCC
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhhChhhcccCc
Confidence            99999999999999999999999999999987643

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=100.00  E-value=4.5e-38  Score=301.80  Aligned_cols=183  Identities=28%  Similarity=0.496  Sum_probs=162.4

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++.+.  +.+++..++.++.||+.||.|||++||+||||||+||+++   .++++||+|||+|+
T Consensus        92 ~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~g~vkL~DFG~a~  166 (345)
T 1xjd_A           92 NLFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD---KDGHIKIADFGMCK  166 (345)
T ss_dssp             EEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEECCCTTCB
T ss_pred             EEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEEC---CCCCEEEeEChhhh
Confidence            357899999999999999665  5799999999999999999999999999999999999998   57899999999998


Q ss_pred             eccC-CCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~~-~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      .... .......+||+.|+|||++.+ .++.++|+||+||++|+|++|..||.+.+.......+....+.++    ..++
T Consensus       167 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s  242 (345)
T 1xjd_A          167 ENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYP----RWLE  242 (345)
T ss_dssp             CCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSC
T ss_pred             hcccCCCcccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhCCCCCC----cccC
Confidence            6432 233456789999999999875 468999999999999999999999999999888888888776554    3589


Q ss_pred             HHHHHHHHHhccCCccCcCCHH-HHhCCCccccCC
Q 014171          196 NSAKDFVKKLLVKDPRARLTAA-QALSHPWVREGG  229 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~~-e~l~h~~~~~~~  229 (429)
                      +++++||.+||+.||.+||++. ++++||||+...
T Consensus       243 ~~~~~li~~lL~~dp~~R~~~~~~i~~hp~f~~~~  277 (345)
T 1xjd_A          243 KEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREIN  277 (345)
T ss_dssp             HHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTCC
T ss_pred             HHHHHHHHHHhcCCHhHcCCChHHHHcCccccCCC
Confidence            9999999999999999999998 999999998753

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=100.00  E-value=1.3e-37  Score=294.24  Aligned_cols=187  Identities=23%  Similarity=0.355  Sum_probs=158.3

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .++|||||. |+|.+++.......+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++..
T Consensus        94 ~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~---~~~~~kl~Dfg~a~~  169 (308)
T 3g33_A           94 VTLVFEHVD-QDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVT---SGGTVKLADFGLARI  169 (308)
T ss_dssp             EEEEEECCC-CBHHHHHHTCCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEEC---TTSCEEECSCSCTTT
T ss_pred             EEEEehhhh-cCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEc---CCCCEEEeeCccccc
Confidence            367999997 6999999776656699999999999999999999999999999999999998   578999999999987


Q ss_pred             ccCCCcccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCC-------
Q 014171          119 IKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP-------  190 (429)
Q Consensus       119 ~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~-------  190 (429)
                      ...........||+.|+|||++. ..++.++||||+||++|+|++|++||.+.+.......+.......+...       
T Consensus       170 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  249 (308)
T 3g33_A          170 YSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSL  249 (308)
T ss_dssp             STTCCCSGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSCSSCSS
T ss_pred             cCCCcccCCccccccccCchHHcCCCCCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhccchhhc
Confidence            76666666778999999999985 4568999999999999999999999999988887777665322211111       


Q ss_pred             ----------------CCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          191 ----------------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       191 ----------------~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                                      .+.+++.+.+||.+||+.||.+|||+.++|+||||+...
T Consensus       250 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h~~~~~~~  304 (308)
T 3g33_A          250 PRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTFNPHKRISAFRALQHSYLHKDE  304 (308)
T ss_dssp             CGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSTTC----
T ss_pred             cccccCCCCCCcHHHhCccccHHHHHHHHHHhcCCCccCCCHHHHhcCccccCCC
Confidence                            235789999999999999999999999999999998753

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=100.00  E-value=2.1e-37  Score=300.13  Aligned_cols=182  Identities=27%  Similarity=0.468  Sum_probs=161.7

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++.+.  +.+++..++.++.||+.||.|||++||+||||||+||+++   .++++||+|||+++
T Consensus       113 ~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~---~~g~ikL~DFG~a~  187 (373)
T 2r5t_A          113 KLYFVLDYINGGELFYHLQRE--RCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLD---SQGHIVLTDFGLCK  187 (373)
T ss_dssp             EEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEECCCCBCG
T ss_pred             EEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEC---CCCCEEEeeCcccc
Confidence            457899999999999999665  6799999999999999999999999999999999999998   57899999999998


Q ss_pred             ecc-CCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~-~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      ... ........+||+.|+|||++.+ .++.++|+||+||++|+|++|..||.+.+..+....+......++    +.++
T Consensus       188 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~~----~~~~  263 (373)
T 2r5t_A          188 ENIEHNSTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLK----PNIT  263 (373)
T ss_dssp             GGBCCCCCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHSCCCCC----SSSC
T ss_pred             ccccCCCccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhcccCCC----CCCC
Confidence            643 3334566789999999999875 468999999999999999999999999999999998888765554    4689


Q ss_pred             HHHHHHHHHhccCCccCcCCH----HHHhCCCccccC
Q 014171          196 NSAKDFVKKLLVKDPRARLTA----AQALSHPWVREG  228 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~----~e~l~h~~~~~~  228 (429)
                      ..+++||.+||+.||.+||++    .++++||||+..
T Consensus       264 ~~~~~li~~lL~~dp~~R~~~~~~~~~i~~h~~f~~~  300 (373)
T 2r5t_A          264 NSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLI  300 (373)
T ss_dssp             HHHHHHHHHHTCSSGGGSTTTTTTHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHcccCHHhCCCCCCCHHHHhCCccccCC
Confidence            999999999999999999986    699999999864

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=100.00  E-value=3.6e-38  Score=306.00  Aligned_cols=208  Identities=31%  Similarity=0.559  Sum_probs=176.8

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG   86 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~   86 (429)
                      ..++|+|++.+++.+..            ....|+|||||+||+|.+++... ...+++..+..++.||+.||.|||++|
T Consensus       141 ~~l~hpnIv~~~~~~~~------------~~~~~lv~E~~~~~~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~  207 (373)
T 2x4f_A          141 NQLDHANLIQLYDAFES------------KNDIVLVMEYVDGGELFDRIIDE-SYNLTELDTILFMKQICEGIRHMHQMY  207 (373)
T ss_dssp             TTCCCTTBCCEEEEEEC------------SSEEEEEEECCTTCEEHHHHHHT-GGGCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HhCCCCCCCeEEEEEEE------------CCEEEEEEeCCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34456665555554432            23357899999999999988654 256999999999999999999999999


Q ss_pred             CeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCC
Q 014171           87 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRR  165 (429)
Q Consensus        87 i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~  165 (429)
                      |+||||||+||++... ..+.+||+|||++.............||+.|+|||++.+ .++.++||||+||++|+|++|..
T Consensus       208 ivH~Dlkp~NIll~~~-~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~  286 (373)
T 2x4f_A          208 ILHLDLKPENILCVNR-DAKQIKIIDFGLARRYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLS  286 (373)
T ss_dssp             EECCCCCGGGEEEEET-TTTEEEECCCSSCEECCTTCBCCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSC
T ss_pred             cccccCCHHHEEEecC-CCCcEEEEeCCCceecCCccccccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCC
Confidence            9999999999999532 357899999999998776666666789999999999874 45889999999999999999999


Q ss_pred             CCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       166 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      ||.+.+.......+......++...++.+++++++||.+||+.||.+|||+.++++||||+..
T Consensus       287 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~hp~~~~~  349 (373)
T 2x4f_A          287 PFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLSDH  349 (373)
T ss_dssp             TTCCSSHHHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHCH
T ss_pred             CCCCCCHHHHHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhcCcCcCCC
Confidence            999999988888888887777666667899999999999999999999999999999999864

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=100.00  E-value=1.8e-37  Score=298.59  Aligned_cols=183  Identities=26%  Similarity=0.457  Sum_probs=162.3

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||.||+|.+++.+.  +.+++..++.++.||+.||.|||++||+||||||+||+++   .++++||+|||+|
T Consensus        94 ~~~~lv~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~---~~g~vkL~DFG~a  168 (353)
T 2i0e_A           94 DRLYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD---SEGHIKIADFGMC  168 (353)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEECCCTTC
T ss_pred             CEEEEEEeCCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEc---CCCcEEEEeCCcc
Confidence            3457899999999999999665  5799999999999999999999999999999999999998   5789999999999


Q ss_pred             eecc-CCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DFIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~~~-~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      .... ........+||+.|+|||++.+ .++.++|+||+||++|+|++|+.||.+.+.......+......++    ..+
T Consensus       169 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~~~~p----~~~  244 (353)
T 2i0e_A          169 KENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYP----KSM  244 (353)
T ss_dssp             BCCCCTTCCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTS
T ss_pred             cccccCCcccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCC----CCC
Confidence            8643 2334456789999999999874 568999999999999999999999999999999999988876654    368


Q ss_pred             CHHHHHHHHHhccCCccCcCC-----HHHHhCCCccccC
Q 014171          195 SNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG  228 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s-----~~e~l~h~~~~~~  228 (429)
                      +.++++||.+||+.||.+||+     ++++++||||+..
T Consensus       245 s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~h~~f~~~  283 (353)
T 2i0e_A          245 SKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI  283 (353)
T ss_dssp             CHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHTSGGGTTC
T ss_pred             CHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcCccccCC
Confidence            999999999999999999994     6999999999864

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=100.00  E-value=1.3e-37  Score=303.50  Aligned_cols=182  Identities=30%  Similarity=0.528  Sum_probs=156.4

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|..++.+.  +.+++..++.++.||+.||.|||++||+||||||+|||++   .++++||+|||+|+
T Consensus       127 ~~~lV~E~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~---~~g~ikL~DFGla~  201 (396)
T 4dc2_A          127 RLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD---SEGHIKLTDYGMCK  201 (396)
T ss_dssp             EEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEECCCTTCB
T ss_pred             EEEEEEEcCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEC---CCCCEEEeecceee
Confidence            457899999999999999665  6899999999999999999999999999999999999998   57899999999998


Q ss_pred             ec-cCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCC---------ChhHHHHHHHhcCCCC
Q 014171          118 FI-KPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDK---------TEDGIFKEVLRNKPDF  186 (429)
Q Consensus       118 ~~-~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~---------~~~~~~~~i~~~~~~~  186 (429)
                      .. .........+||+.|+|||++.+ .++.++|+||+||++|+|++|+.||.+.         ........+......+
T Consensus       202 ~~~~~~~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~  281 (396)
T 4dc2_A          202 EGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI  281 (396)
T ss_dssp             CCCCTTCCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSTTTTC------CCHHHHHHHHHHCCCCC
T ss_pred             ecccCCCccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCcccccccccchhhHHHHHHHHhccccCC
Confidence            63 34445567789999999999875 4689999999999999999999999643         2233556666666555


Q ss_pred             CCCCCCCCCHHHHHHHHHhccCCccCcCCH------HHHhCCCccccC
Q 014171          187 RRKPWPSISNSAKDFVKKLLVKDPRARLTA------AQALSHPWVREG  228 (429)
Q Consensus       187 ~~~~~~~~~~~~~~li~~~l~~dp~~R~s~------~e~l~h~~~~~~  228 (429)
                      +    ..++.++++||.+||+.||.+||++      +++++||||+..
T Consensus       282 p----~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~Hpff~~i  325 (396)
T 4dc2_A          282 P----RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV  325 (396)
T ss_dssp             C----TTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHHSTTTTTC
T ss_pred             C----CcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhcCccccCC
Confidence            4    3589999999999999999999984      799999999874

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=100.00  E-value=7.9e-38  Score=298.16  Aligned_cols=196  Identities=32%  Similarity=0.631  Sum_probs=146.1

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++...  +.+++..+..++.||+.||.|||++||+||||||+||+++..+....+||+|||++.
T Consensus        80 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~  157 (325)
T 3kn6_A           80 HTFLVMELLNGGELFERIKKK--KHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFAR  157 (325)
T ss_dssp             EEEEEECCCCSCBHHHHHHHC--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCE
T ss_pred             EEEEEEEccCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccce
Confidence            346899999999999999654  689999999999999999999999999999999999999854344589999999998


Q ss_pred             eccCCC-cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCCh-------hHHHHHHHhcCCCCCC
Q 014171          118 FIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE-------DGIFKEVLRNKPDFRR  188 (429)
Q Consensus       118 ~~~~~~-~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~-------~~~~~~i~~~~~~~~~  188 (429)
                      ...... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+...       .+....+..+...++.
T Consensus       158 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~i~~~~~~~~~  237 (325)
T 3kn6_A          158 LKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDFSFEG  237 (325)
T ss_dssp             ECCC----------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-------CCCHHHHHHHHTTTCCCCCS
T ss_pred             ecCCCCCcccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCccccccccHHHHHHHHHcCCCCCCc
Confidence            664432 3345678999999999865 468899999999999999999999976433       4556667677666665


Q ss_pred             CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCCCCCC
Q 014171          189 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIP  235 (429)
Q Consensus       189 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~~~~~  235 (429)
                      ..++.+++++++||.+||+.||.+|||++++++||||+.....+..+
T Consensus       238 ~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h~w~~~~~~~~~~~  284 (325)
T 3kn6_A          238 EAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYNEWLQDGSQLSSNP  284 (325)
T ss_dssp             HHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTCGGGCTTCCCCCSC
T ss_pred             ccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcChhhccCccCCCCC
Confidence            55667899999999999999999999999999999999876554443

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=100.00  E-value=9.9e-38  Score=297.79  Aligned_cols=193  Identities=30%  Similarity=0.544  Sum_probs=166.6

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++.......+++..+..++.||+.||.|||++||+||||||+||+++.....+.+||+|||++.
T Consensus       103 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~  182 (327)
T 3lm5_A          103 EIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR  182 (327)
T ss_dssp             EEEEEEECCTTEEGGGGGSSCC-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCE
T ss_pred             eEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCcccc
Confidence            35789999999999998866555789999999999999999999999999999999999999854346899999999998


Q ss_pred             eccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCH
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN  196 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  196 (429)
                      ............||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+.........+......++...++.+++
T Consensus       183 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  262 (327)
T 3lm5_A          183 KIGHACELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSEETFSSVSQ  262 (327)
T ss_dssp             EC---------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTTTTTSCH
T ss_pred             ccCCccccccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCchhhcccCH
Confidence            8766555566789999999999874 468899999999999999999999999998888888888887777777788999


Q ss_pred             HHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          197 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       197 ~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                      .+++||.+||+.||.+|||++++++||||+....
T Consensus       263 ~~~~li~~~L~~dP~~Rpt~~~ll~h~~~~~~~~  296 (327)
T 3lm5_A          263 LATDFIQSLLVKNPEKRPTAEICLSHSWLQQWDF  296 (327)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHTTCGGGCCCCT
T ss_pred             HHHHHHHHHcCCChhhCcCHHHHhCCHhhccccc
Confidence            9999999999999999999999999999987644

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=100.00  E-value=2.2e-38  Score=302.92  Aligned_cols=181  Identities=36%  Similarity=0.649  Sum_probs=155.1

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+||||| +|+|.+++...  +.+++..++.++.||+.||.|||++||+||||||+||+++   .++.+||+|||++.
T Consensus        83 ~~~lv~E~~-~g~l~~~l~~~--~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~---~~~~~kl~DFG~s~  156 (336)
T 3h4j_B           83 DIVMVIEYA-GGELFDYIVEK--KRMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLD---DNLNVKIADFGLSN  156 (336)
T ss_dssp             EEEEEECCC-CEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEEC---TTCCEEECCSSCTB
T ss_pred             EEEEEEECC-CCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEc---CCCCEEEEEeccce
Confidence            356899999 78999999766  6799999999999999999999999999999999999998   57899999999998


Q ss_pred             eccCCCcccccccCCcccccccccCCC--CCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      ...........+||+.|+|||++.+..  ++++||||+||++|+|++|+.||.+.........+......    .+..++
T Consensus       157 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~----~p~~~s  232 (336)
T 3h4j_B          157 IMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKVNSCVYV----MPDFLS  232 (336)
T ss_dssp             TTTTSBTTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCSSSTTCBCCCCSSCCC----CCTTSC
T ss_pred             eccCCcccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCccHHHHHHHHHcCCCC----CcccCC
Confidence            776666666778999999999997643  67899999999999999999999876555444333333222    224579


Q ss_pred             HHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          196 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      +.+++||.+||+.||.+|||++++++||||+..
T Consensus       233 ~~~~~li~~~L~~dP~~Rpt~~eil~hp~~~~~  265 (336)
T 3h4j_B          233 PGAQSLIRRMIVADPMQRITIQEIRRDPWFNVN  265 (336)
T ss_dssp             HHHHHHHHTTSCSSGGGSCCHHHHTTCHHHHTT
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHhChhhccC
Confidence            999999999999999999999999999999864

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=100.00  E-value=2.7e-37  Score=297.16  Aligned_cols=180  Identities=25%  Similarity=0.466  Sum_probs=161.6

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++.+.  +.+++..++.++.||+.||.|||++||+||||||+||+++   .++.+||+|||++.
T Consensus       115 ~~~lv~e~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~g~~kL~DFg~a~  189 (350)
T 1rdq_E          115 NLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAK  189 (350)
T ss_dssp             EEEEEEECCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTCE
T ss_pred             EEEEEEcCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEEC---CCCCEEEcccccce
Confidence            357899999999999999765  5799999999999999999999999999999999999998   57899999999998


Q ss_pred             eccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCH
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN  196 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  196 (429)
                      .....  ....+||+.|+|||++.+ .++.++|+||+||++|+|++|..||.+.+.......+..+...++    ..++.
T Consensus       190 ~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~~~  263 (350)
T 1rdq_E          190 RVKGR--TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSS  263 (350)
T ss_dssp             ECSSC--BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTCCH
T ss_pred             eccCC--cccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcCCCCCC----CCCCH
Confidence            76533  345689999999999865 458899999999999999999999999999899999988876554    35899


Q ss_pred             HHHHHHHHhccCCccCcCC-----HHHHhCCCccccC
Q 014171          197 SAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG  228 (429)
Q Consensus       197 ~~~~li~~~l~~dp~~R~s-----~~e~l~h~~~~~~  228 (429)
                      +++++|.+||+.||.+||+     ++++++||||+..
T Consensus       264 ~~~~li~~lL~~dp~~R~~~~~~~~~ei~~h~~f~~~  300 (350)
T 1rdq_E          264 DLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT  300 (350)
T ss_dssp             HHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred             HHHHHHHHHhhcCHHhccCCccCCHHHHHhCcCcCCC
Confidence            9999999999999999998     9999999999864

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=100.00  E-value=9.4e-38  Score=296.27  Aligned_cols=192  Identities=38%  Similarity=0.620  Sum_probs=153.8

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||.||+|.+++...  ..+++..+..++.||+.||.|||++||+||||||+||+++..+....+||+|||++
T Consensus        84 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~  161 (316)
T 2ac3_A           84 DRFYLVFEKMRGGSILSHIHKR--RHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLG  161 (316)
T ss_dssp             TEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCC
T ss_pred             CEEEEEEEcCCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCc
Confidence            3457899999999999999765  57999999999999999999999999999999999999986444455999999998


Q ss_pred             eeccCCC--------cccccccCCcccccccccC------CCCCCcchHHHHHHHHHHhhCCCCCCCCCh----------
Q 014171          117 DFIKPGK--------KFQDIVGSAYYVAPEVLKR------KSGPESDVWSIGVITYILLCGRRPFWDKTE----------  172 (429)
Q Consensus       117 ~~~~~~~--------~~~~~~g~~~y~aPE~~~~------~~~~~~DiwslG~il~~l~~g~~pf~~~~~----------  172 (429)
                      .......        ......||+.|+|||++.+      .++.++||||+||++|+|++|+.||.+...          
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~  241 (316)
T 2ac3_A          162 SGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEA  241 (316)
T ss_dssp             C-------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCCCSCSCC----C
T ss_pred             cccccCCccccccccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCccccccccccccccc
Confidence            7653221        1234468999999999863      458899999999999999999999977642          


Q ss_pred             -----hHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          173 -----DGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       173 -----~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                           ......+..+...++...+..++..+++||.+||+.||.+|||++++++||||+....
T Consensus       242 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~~~  304 (316)
T 2ac3_A          242 CPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQGCAP  304 (316)
T ss_dssp             CHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSTTCC----
T ss_pred             chhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcChhhcCCCC
Confidence                 3355666666666655445678999999999999999999999999999999997643

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=100.00  E-value=1.5e-37  Score=300.92  Aligned_cols=186  Identities=35%  Similarity=0.688  Sum_probs=166.9

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||.||+|.+++...  ..+++..+..++.||+.||.|||+.||+||||||+||+++   .++.++|+|||++
T Consensus       173 ~~~~lv~e~~~g~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~---~~~~ikl~DfG~~  247 (365)
T 2y7j_A          173 SFMFLVFDLMRKGELFDYLTEK--VALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLD---DNMQIRLSDFGFS  247 (365)
T ss_dssp             SEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCCTTC
T ss_pred             CEEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEC---CCCCEEEEecCcc
Confidence            3457899999999999999655  5799999999999999999999999999999999999998   5789999999999


Q ss_pred             eeccCCCcccccccCCcccccccccC-------CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCC
Q 014171          117 DFIKPGKKFQDIVGSAYYVAPEVLKR-------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK  189 (429)
Q Consensus       117 ~~~~~~~~~~~~~g~~~y~aPE~~~~-------~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  189 (429)
                      ..+..........||+.|+|||++.+       .++.++||||+||++|+|++|..||.+.........+..+...+..+
T Consensus       248 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~  327 (365)
T 2y7j_A          248 CHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSP  327 (365)
T ss_dssp             EECCTTCCBCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCHH
T ss_pred             cccCCCcccccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCCCc
Confidence            88876666667789999999999853       35789999999999999999999999988888888888887766655


Q ss_pred             CCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcccc
Q 014171          190 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE  227 (429)
Q Consensus       190 ~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~  227 (429)
                      .+..++..+.++|.+||+.||.+|||+.++++||||++
T Consensus       328 ~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~f~r  365 (365)
T 2y7j_A          328 EWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER  365 (365)
T ss_dssp             HHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCC
T ss_pred             ccccCCHHHHHHHHHHcCCChhHCcCHHHHhcCcccCC
Confidence            66778999999999999999999999999999999974

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=100.00  E-value=5.8e-37  Score=297.75  Aligned_cols=182  Identities=24%  Similarity=0.460  Sum_probs=157.5

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++...  +.+++..++.++.||+.||.|||++||+||||||+||+++   .++.+||+|||+|.
T Consensus        89 ~~~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~---~~g~vkL~DFG~a~  163 (384)
T 4fr4_A           89 DMFMVVDLLLGGDLRYHLQQN--VHFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLD---EHGHVHITDFNIAA  163 (384)
T ss_dssp             EEEEEECCCTTEEHHHHHHTT--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTCE
T ss_pred             EEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEC---CCCCEEEeccceee
Confidence            357899999999999998543  6899999999999999999999999999999999999998   57899999999999


Q ss_pred             eccCCCcccccccCCcccccccccC----CCCCCcchHHHHHHHHHHhhCCCCCCCCC---hhHHHHHHHhcCCCCCCCC
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLCGRRPFWDKT---EDGIFKEVLRNKPDFRRKP  190 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~----~~~~~~DiwslG~il~~l~~g~~pf~~~~---~~~~~~~i~~~~~~~~~~~  190 (429)
                      ...........+||+.|+|||++.+    .++.++||||+||++|+|++|+.||.+..   .......+......++   
T Consensus       164 ~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~~~~~~~~~~~~~~~~~~~~p---  240 (384)
T 4fr4_A          164 MLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVVTYP---  240 (384)
T ss_dssp             ECCTTCCBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCCTTSCHHHHHHHHHHCCCCCC---
T ss_pred             eccCCCceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCCCCccHHHHHHHHhhcccCCC---
Confidence            8776666677899999999999853    36889999999999999999999997543   3344445555544443   


Q ss_pred             CCCCCHHHHHHHHHhccCCccCcCC-HHHHhCCCccccC
Q 014171          191 WPSISNSAKDFVKKLLVKDPRARLT-AAQALSHPWVREG  228 (429)
Q Consensus       191 ~~~~~~~~~~li~~~l~~dp~~R~s-~~e~l~h~~~~~~  228 (429)
                       ..++..+.+||.+||+.||.+||+ ++++++||||+..
T Consensus       241 -~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~hp~f~~~  278 (384)
T 4fr4_A          241 -SAWSQEMVSLLKKLLEPNPDQRFSQLSDVQNFPYMNDI  278 (384)
T ss_dssp             -TTSCHHHHHHHHHHSCSSGGGSCCSHHHHHTSGGGTTC
T ss_pred             -CcCCHHHHHHHHHHhcCCHhHhcccHHHHHcChhhhcC
Confidence             357999999999999999999998 8999999999875

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=100.00  E-value=3.8e-37  Score=291.66  Aligned_cols=187  Identities=27%  Similarity=0.474  Sum_probs=153.9

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||. |+|.+.+... ...+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++.
T Consensus        93 ~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~---~~~~~kl~Dfg~a~  167 (311)
T 3niz_A           93 CLTLVFEFME-KDLKKVLDEN-KTGLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLIN---SDGALKLADFGLAR  167 (311)
T ss_dssp             CEEEEEECCS-EEHHHHHHTC-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCTTCE
T ss_pred             EEEEEEcCCC-CCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEEC---CCCCEEEccCcCce
Confidence            3468999998 5888888654 35699999999999999999999999999999999999998   57899999999998


Q ss_pred             eccCC-CcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCC-----
Q 014171          118 FIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK-----  189 (429)
Q Consensus       118 ~~~~~-~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~-----  189 (429)
                      ..... .......||+.|+|||++.+  .++.++||||+||++|+|++|+.||.+.+.......+........+.     
T Consensus       168 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  247 (311)
T 3niz_A          168 AFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWPQV  247 (311)
T ss_dssp             ETTSCCC---CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSGGG
T ss_pred             ecCCCcccccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhhhh
Confidence            76533 23345578999999999864  46889999999999999999999999888777766665422111111     


Q ss_pred             ---------------------CCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          190 ---------------------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       190 ---------------------~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                                           ..+.+++++.+||.+||+.||.+|||++++++||||++..
T Consensus       248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  308 (311)
T 3niz_A          248 QELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYFKDLD  308 (311)
T ss_dssp             TTSHHHHSCCCCCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTSC
T ss_pred             hccchhhhcccccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhcCcccccCC
Confidence                                 1234678999999999999999999999999999999764

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=100.00  E-value=4.2e-37  Score=295.38  Aligned_cols=182  Identities=30%  Similarity=0.524  Sum_probs=155.4

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++.+.  +.+++..++.++.||+.||.|||++||+||||||+||+++   .++++||+|||+++
T Consensus        84 ~~~lv~e~~~gg~L~~~l~~~--~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~g~~kL~DFG~a~  158 (345)
T 3a8x_A           84 RLFFVIEYVNGGDLMFHMQRQ--RKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLD---SEGHIKLTDYGMCK  158 (345)
T ss_dssp             EEEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEECCGGGCB
T ss_pred             EEEEEEeCCCCCcHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEC---CCCCEEEEeccccc
Confidence            457899999999999999665  5799999999999999999999999999999999999998   57899999999998


Q ss_pred             ecc-CCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCC---------CChhHHHHHHHhcCCCC
Q 014171          118 FIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWD---------KTEDGIFKEVLRNKPDF  186 (429)
Q Consensus       118 ~~~-~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~---------~~~~~~~~~i~~~~~~~  186 (429)
                      ... ........+||+.|+|||++.+ .++.++|+||+||++|+|++|+.||..         .........+......+
T Consensus       159 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~  238 (345)
T 3a8x_A          159 EGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRI  238 (345)
T ss_dssp             CSCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTTTC-------CHHHHHHHHHHCCCCC
T ss_pred             cccCCCCcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCCcccccccccccHHHHHHHHHcCCCCC
Confidence            643 3334456789999999999875 468899999999999999999999965         23334555666665544


Q ss_pred             CCCCCCCCCHHHHHHHHHhccCCccCcCCH------HHHhCCCccccC
Q 014171          187 RRKPWPSISNSAKDFVKKLLVKDPRARLTA------AQALSHPWVREG  228 (429)
Q Consensus       187 ~~~~~~~~~~~~~~li~~~l~~dp~~R~s~------~e~l~h~~~~~~  228 (429)
                      +    ..++..+++||.+||+.||.+||++      +++++||||+..
T Consensus       239 p----~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~hp~f~~~  282 (345)
T 3a8x_A          239 P----RSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNV  282 (345)
T ss_dssp             C----TTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHTSGGGTTC
T ss_pred             C----CCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhcCCccCCC
Confidence            4    3689999999999999999999995      899999999864

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=100.00  E-value=1.4e-37  Score=307.10  Aligned_cols=187  Identities=26%  Similarity=0.464  Sum_probs=160.9

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++.+. .+.+++..++.++.||+.||.|||++||+||||||+|||++   .++.+||+|||+|+
T Consensus       148 ~~~lV~Ey~~gg~L~~~l~~~-~~~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~---~~g~vkL~DFGla~  223 (437)
T 4aw2_A          148 NLYLVMDYYVGGDLLTLLSKF-EDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMD---MNGHIRLADFGSCL  223 (437)
T ss_dssp             EEEEEECCCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTCE
T ss_pred             EEEEEEecCCCCcHHHHHHHc-cCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEc---CCCCEEEcchhhhh
Confidence            357899999999999999653 36799999999999999999999999999999999999998   57899999999998


Q ss_pred             eccCCCc--ccccccCCccccccccc------CCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcC--CCCC
Q 014171          118 FIKPGKK--FQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK--PDFR  187 (429)
Q Consensus       118 ~~~~~~~--~~~~~g~~~y~aPE~~~------~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~--~~~~  187 (429)
                      .......  ....+||+.|+|||++.      +.++.++||||+||++|+|++|+.||.+.+..+....+....  ..++
T Consensus       224 ~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~~~p  303 (437)
T 4aw2_A          224 KLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFP  303 (437)
T ss_dssp             ECCTTSCEECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCCCC
T ss_pred             hcccCCCcccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhhccccccCC
Confidence            7654433  23468999999999985      346889999999999999999999999999888888887543  2222


Q ss_pred             CCCCCCCCHHHHHHHHHhccCCccC--cCCHHHHhCCCccccCC
Q 014171          188 RKPWPSISNSAKDFVKKLLVKDPRA--RLTAAQALSHPWVREGG  229 (429)
Q Consensus       188 ~~~~~~~~~~~~~li~~~l~~dp~~--R~s~~e~l~h~~~~~~~  229 (429)
                       ..++.+++++++||.+||+.+|.+  |++++++++||||+...
T Consensus       304 -~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~Hpff~~i~  346 (437)
T 4aw2_A          304 -TQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKHPFFSGID  346 (437)
T ss_dssp             -SSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTSGGGTTCC
T ss_pred             -cccccCCHHHHHHHHHHhcccccccCCCCHHHHhCCCccCCCC
Confidence             223568999999999999998888  99999999999998764

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=100.00  E-value=5.7e-37  Score=292.52  Aligned_cols=183  Identities=28%  Similarity=0.519  Sum_probs=157.1

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||.||+|.+++...  +.+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++
T Consensus        94 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~---~~~~~kl~Dfg~~  168 (327)
T 3a62_A           94 GKLYLILEYLSGGELFMQLERE--GIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLN---HQGHVKLTDFGLC  168 (327)
T ss_dssp             SCEEEEEECCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEEC---TTSCEEECCCSCC
T ss_pred             CEEEEEEeCCCCCcHHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEEC---CCCcEEEEeCCcc
Confidence            3457899999999999999665  6799999999999999999999999999999999999998   5789999999998


Q ss_pred             eeccC-CCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DFIKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~~~~-~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      ..... ........||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+.+.......+......++    +.+
T Consensus       169 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~p----~~~  244 (327)
T 3a62_A          169 KESIHDGTVTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCKLNLP----PYL  244 (327)
T ss_dssp             ----------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCC----TTS
T ss_pred             cccccCCccccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCCCC----CCC
Confidence            76432 223345679999999999864 468899999999999999999999999988888888888766544    357


Q ss_pred             CHHHHHHHHHhccCCccCcC-----CHHHHhCCCccccC
Q 014171          195 SNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG  228 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~-----s~~e~l~h~~~~~~  228 (429)
                      +..+++||.+||..||.+||     ++.++++||||+..
T Consensus       245 ~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~hp~f~~~  283 (327)
T 3a62_A          245 TQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPFFRHI  283 (327)
T ss_dssp             CHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHHSGGGSSC
T ss_pred             CHHHHHHHHHHHhcCHhhccCCCCCCHHHHHcCCcccCC
Confidence            99999999999999999999     89999999999864

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=100.00  E-value=6e-37  Score=304.71  Aligned_cols=182  Identities=30%  Similarity=0.547  Sum_probs=159.9

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~-~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ..|+|||||.||+|.+++...  ..+++..+..++.||+.||.|||+ +||+||||||+|||++   .++.+||+|||+|
T Consensus       222 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~---~~~~~kl~DFG~a  296 (446)
T 4ejn_A          222 RLCFVMEYANGGELFFHLSRE--RVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLD---KDGHIKITDFGLC  296 (446)
T ss_dssp             EEEEEECCCSSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEEC---SSSCEEECCCCCC
T ss_pred             EEEEEEeeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEEC---CCCCEEEccCCCc
Confidence            357899999999999999665  689999999999999999999998 9999999999999998   5789999999999


Q ss_pred             eecc-CCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DFIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~~~-~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      .... ........+||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+.+.......+......++    ..+
T Consensus       297 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~~  372 (446)
T 4ejn_A          297 KEGIKDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIRFP----RTL  372 (446)
T ss_dssp             CTTCC-----CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTS
T ss_pred             eeccCCCcccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCCCC----ccC
Confidence            7643 2333456789999999999864 568999999999999999999999999998888888888776554    357


Q ss_pred             CHHHHHHHHHhccCCccCcC-----CHHHHhCCCccccC
Q 014171          195 SNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG  228 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~-----s~~e~l~h~~~~~~  228 (429)
                      ++++.+||.+||+.||.+||     +++++++||||+..
T Consensus       373 ~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~hp~f~~~  411 (446)
T 4ejn_A          373 GPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGI  411 (446)
T ss_dssp             CHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             CHHHHHHHHHHcccCHHHhCCCCCCCHHHHHhCccccCC
Confidence            99999999999999999999     99999999999875

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=100.00  E-value=3.9e-37  Score=306.93  Aligned_cols=183  Identities=36%  Similarity=0.602  Sum_probs=163.2

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++.+  .+.+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++.
T Consensus        90 ~~~lv~E~~~gg~L~~~l~~--~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~---~~~~vkL~DFG~a~  164 (476)
T 2y94_A           90 DIFMVMEYVSGGELFDYICK--NGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLD---AHMNAKIADFGLSN  164 (476)
T ss_dssp             EEEEEEECCSSEEHHHHTTS--SSSCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEC---TTCCEEECCCSSCE
T ss_pred             EEEEEEeCCCCCcHHHHHHh--cCCCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEe---cCCCeEEEeccchh
Confidence            35789999999999999843  46899999999999999999999999999999999999998   57899999999998


Q ss_pred             eccCCCcccccccCCcccccccccCCC--CCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      ...........+||+.|+|||++.+..  +.++||||+||++|+|++|+.||.+.........+..+....+    ..++
T Consensus       165 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s  240 (476)
T 2y94_A          165 MMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDGIFYTP----QYLN  240 (476)
T ss_dssp             ECCTTCCBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTTCCCCC----TTCC
T ss_pred             hccccccccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcCCcCCC----ccCC
Confidence            877666666778999999999997643  6789999999999999999999999888888888887765433    3579


Q ss_pred             HHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          196 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      +++++||.+||+.||.+|||++++++||||+...
T Consensus       241 ~~~~~Li~~~L~~dP~~Rpt~~eil~hp~~~~~~  274 (476)
T 2y94_A          241 PSVISLLKHMLQVDPMKRATIKDIREHEWFKQDL  274 (476)
T ss_dssp             HHHHHHHHHHTCSSTTTSCCHHHHHTCHHHHTTC
T ss_pred             HHHHHHHHHHcCCCchhCcCHHHHHhCHHhhhcC
Confidence            9999999999999999999999999999998753

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=100.00  E-value=5e-37  Score=292.56  Aligned_cols=193  Identities=25%  Similarity=0.400  Sum_probs=154.0

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||. |+|.+++... +..+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++
T Consensus        73 ~~~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~---~~~~~kl~Dfg~a  147 (324)
T 3mtl_A           73 KSLTLVFEYLD-KDLKQYLDDC-GNIINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLIN---ERGELKLADFGLA  147 (324)
T ss_dssp             SCEEEEEECCS-EEHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEEC---TTCCEEECSSSEE
T ss_pred             CEEEEEecccc-cCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEEC---CCCCEEEccCccc
Confidence            34578999998 5999988654 35799999999999999999999999999999999999998   5789999999999


Q ss_pred             eeccCC-CcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCC---
Q 014171          117 DFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP---  190 (429)
Q Consensus       117 ~~~~~~-~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~---  190 (429)
                      ...... .......||+.|+|||++.+  .++.++||||+||++|+|++|+.||.+.+..+....+...........   
T Consensus       148 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  227 (324)
T 3mtl_A          148 RAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWPG  227 (324)
T ss_dssp             ECC------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTT
T ss_pred             ccccCCccccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhchh
Confidence            765432 23345578999999999864  458899999999999999999999999888877776655322222211   


Q ss_pred             -----------------------CCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCCCCC
Q 014171          191 -----------------------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI  234 (429)
Q Consensus       191 -----------------------~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~~~~  234 (429)
                                             .+.+++++.+||.+||+.||.+|||++++++||||.........
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~~~~~~  294 (324)
T 3mtl_A          228 ILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGERIHK  294 (324)
T ss_dssp             GGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCSTTSS
T ss_pred             hhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhcChhhhhccccccc
Confidence                                   23468899999999999999999999999999999987654433

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=100.00  E-value=2.3e-37  Score=294.46  Aligned_cols=191  Identities=37%  Similarity=0.632  Sum_probs=165.8

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCC-CCCEEEeeccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE-DSSLKATDFGL  115 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~-~~~~kL~Dfg~  115 (429)
                      ...|+|||||.||+|.+++...  +.+++..+..++.|++.||.|||++||+||||||+||+++..+. ...+||+|||+
T Consensus        88 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~  165 (321)
T 2a2a_A           88 TDVVLILELVSGGELFDFLAQK--ESLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGL  165 (321)
T ss_dssp             SEEEEEECCCCSCBHHHHHHTC--SCEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTT
T ss_pred             CEEEEEEEcCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCcc
Confidence            3457899999999999999543  67999999999999999999999999999999999999984211 12799999999


Q ss_pred             ceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          116 SDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       116 a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      +.............||+.|+|||++.+ .++.++||||+||++|+|++|..||.+.+.......+......++...++.+
T Consensus       166 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  245 (321)
T 2a2a_A          166 AHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHT  245 (321)
T ss_dssp             CEECCTTCCCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCHHHHTTC
T ss_pred             ceecCccccccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcccccChhhhccc
Confidence            988776655566789999999999874 4688999999999999999999999999888888888877766555445678


Q ss_pred             CHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      +..+++||.+||+.||.+|||++++++||||+...
T Consensus       246 ~~~~~~li~~~l~~dp~~Rps~~e~l~hp~~~~~~  280 (321)
T 2a2a_A          246 SELAKDFIRKLLVKETRKRLTIQEALRHPWITPVD  280 (321)
T ss_dssp             CHHHHHHHHTTSCSSTTTSCCHHHHHHSTTTSCSS
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHhcCccccCCC
Confidence            99999999999999999999999999999998653

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=100.00  E-value=9.2e-37  Score=289.81  Aligned_cols=191  Identities=26%  Similarity=0.397  Sum_probs=156.6

Q ss_pred             cceeEeeecCCCChHHHHHhhc----CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeec
Q 014171           38 RKLRRIRLCEGGELLDRILAKK----DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF  113 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~----~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Df  113 (429)
                      ..|+|||||. |+|.+++....    ...+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+||
T Consensus        77 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~---~~~~~kl~Df  152 (317)
T 2pmi_A           77 KLTLVFEFMD-NDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLIN---KRGQLKLGDF  152 (317)
T ss_dssp             EEEEEEECCC-CBHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCC
T ss_pred             eEEEEEEecC-CCHHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEc---CCCCEEECcC
Confidence            3568999998 69999886543    24589999999999999999999999999999999999998   5789999999


Q ss_pred             ccceeccCC-CcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCC--
Q 014171          114 GLSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR--  188 (429)
Q Consensus       114 g~a~~~~~~-~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~--  188 (429)
                      |++...... .......||+.|+|||++.+  .++.++||||+||++|+|++|+.||.+.+.......+.........  
T Consensus       153 g~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  232 (317)
T 2pmi_A          153 GLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESL  232 (317)
T ss_dssp             SSCEETTSCCCCCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTT
T ss_pred             ccceecCCCcccCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhH
Confidence            999876533 23345678999999999864  4688999999999999999999999998887777666542111000  


Q ss_pred             ----------------------------CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCCC
Q 014171          189 ----------------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS  232 (429)
Q Consensus       189 ----------------------------~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~~  232 (429)
                                                  .....++.++.+||.+||+.||.+|||++++++||||++.....
T Consensus       233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~~~~~  304 (317)
T 2pmi_A          233 WPSVTKLPKYNPNIQQRPPRDLRQVLQPHTKEPLDGNLMDFLHGLLQLNPDMRLSAKQALHHPWFAEYYHHA  304 (317)
T ss_dssp             CGGGGGCTTCCTTCCCCCCCCSHHHHGGGCSSCCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGGGGCC--
T ss_pred             hhhhhhhhhcccccccccchhHHHhhcccccccCCHHHHHHHHHHCCCCcccCCCHHHHhCChhhhcccchh
Confidence                                        01125788999999999999999999999999999999876543

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=100.00  E-value=6e-37  Score=286.99  Aligned_cols=187  Identities=27%  Similarity=0.416  Sum_probs=150.4

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||.+ +|.+++... .+.+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++
T Consensus        73 ~~~~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~  147 (288)
T 1ob3_A           73 KRLVLVFEHLDQ-DLKKLLDVC-EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLIN---REGELKIADFGLA  147 (288)
T ss_dssp             SCEEEEEECCSE-EHHHHHHTS-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSCEEECCTTHH
T ss_pred             CeEEEEEEecCC-CHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCCEEEeECccc
Confidence            345789999985 898888643 36799999999999999999999999999999999999998   5789999999999


Q ss_pred             eeccCC-CcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCC-----
Q 014171          117 DFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR-----  188 (429)
Q Consensus       117 ~~~~~~-~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~-----  188 (429)
                      ...... .......||+.|+|||++.+  .++.++||||+||++|+|++|+.||.+.+.......+.........     
T Consensus       148 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (288)
T 1ob3_A          148 RAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPN  227 (288)
T ss_dssp             HHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTT
T ss_pred             cccCccccccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhchh
Confidence            766432 22345578999999999864  4689999999999999999999999988877776665442111000     


Q ss_pred             --------------------CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          189 --------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       189 --------------------~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                                          ...+.+++++.+||.+||+.||.+|||++++++||||++.
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  287 (288)
T 1ob3_A          228 VTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKEN  287 (288)
T ss_dssp             GGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC-
T ss_pred             hhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhc
Confidence                                0123578999999999999999999999999999999864

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=100.00  E-value=7.9e-37  Score=288.40  Aligned_cols=189  Identities=46%  Similarity=0.799  Sum_probs=166.7

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++...  +.+++..+..++.|++.||.|||++||+||||||+||++...+.++.++|+|||.+.
T Consensus        80 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~  157 (304)
T 2jam_A           80 HYYLVMQLVSGGELFDRILER--GVYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSK  157 (304)
T ss_dssp             EEEEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTC
T ss_pred             EEEEEEEcCCCccHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcce
Confidence            457899999999999999665  579999999999999999999999999999999999999543367899999999987


Q ss_pred             eccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCH
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN  196 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  196 (429)
                      ..... ......|++.|+|||++.+ .++.++||||+||++|+|++|..||.+.+.......+..+...++.+.++.+++
T Consensus       158 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  236 (304)
T 2jam_A          158 MEQNG-IMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISE  236 (304)
T ss_dssp             CCCCB-TTHHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCCCCCCTTTTTTSCH
T ss_pred             ecCCC-ccccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCCCCccccccCCH
Confidence            54432 2344578999999999875 458899999999999999999999999988888888888887777777778999


Q ss_pred             HHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          197 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       197 ~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      .+.++|.+||..||.+|||++++++||||+...
T Consensus       237 ~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  269 (304)
T 2jam_A          237 SAKDFICHLLEKDPNERYTCEKALSHPWIDGNT  269 (304)
T ss_dssp             HHHHHHHHHHCSSTTTSCCHHHHHTSHHHHSSC
T ss_pred             HHHHHHHHHcCCChhHCcCHHHHhcCccccCCC
Confidence            999999999999999999999999999998764

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=100.00  E-value=3.4e-37  Score=288.47  Aligned_cols=190  Identities=43%  Similarity=0.752  Sum_probs=169.4

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.+|+|.+++...  ..+++..+..++.||+.||.|||++||+||||||+||+++..+....+||+|||++.
T Consensus        95 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~  172 (287)
T 2wei_A           95 SFYIVGELYTGGELFDEIIKR--KRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLST  172 (287)
T ss_dssp             EEEEEECCCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGG
T ss_pred             eEEEEEEccCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcce
Confidence            457899999999999998765  579999999999999999999999999999999999999865456689999999998


Q ss_pred             eccCCCcccccccCCcccccccccCCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHH
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS  197 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  197 (429)
                      ............|++.|+|||++.+.++.++||||+|+++|+|++|..||.+.+.......+..+...++.+.+..++++
T Consensus       173 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (287)
T 2wei_A          173 CFQQNTKMKDRIGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDD  252 (287)
T ss_dssp             TBCCCSSCSCHHHHHTTCCHHHHTTCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCSGGGTTSCHH
T ss_pred             eecCCCccccccCcccccChHHhcCCCCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCCCCCCchhhhhcCHH
Confidence            76655555556789999999999888899999999999999999999999999888888888888776666666788999


Q ss_pred             HHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          198 AKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       198 ~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      +.++|.+||..||.+|||+.++++||||++..
T Consensus       253 ~~~li~~~l~~dp~~Rps~~ell~hp~~~~~~  284 (287)
T 2wei_A          253 AKDLIRKMLTFHPSLRITATQCLEHPWIQKYS  284 (287)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHSHHHHHHC
T ss_pred             HHHHHHHHcccChhhCcCHHHHhcCHHHhccc
Confidence            99999999999999999999999999998653

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=100.00  E-value=5.3e-37  Score=299.81  Aligned_cols=190  Identities=21%  Similarity=0.260  Sum_probs=151.7

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++.......+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||.+.
T Consensus       100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~---~~~~~kl~dfg~~~  176 (389)
T 3gni_B          100 ELWVVTSFMAYGSAKDLICTHFMDGMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILIS---VDGKVYLSGLRSNL  176 (389)
T ss_dssp             EEEEEEECCTTCBHHHHHHHTCTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCGGGCE
T ss_pred             EEEEEEEccCCCCHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEcccccce
Confidence            457899999999999999877667899999999999999999999999999999999999998   57899999999886


Q ss_pred             eccCC--------CcccccccCCcccccccccC---CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCC
Q 014171          118 FIKPG--------KKFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF  186 (429)
Q Consensus       118 ~~~~~--------~~~~~~~g~~~y~aPE~~~~---~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~  186 (429)
                      .....        .......||+.|+|||++.+   .++.++||||+||++|+|++|+.||.+.+.......+..+....
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  256 (389)
T 3gni_B          177 SMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPC  256 (389)
T ss_dssp             ECEETTEECSCBCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCSTTHHHHC-------
T ss_pred             eeccccccccccccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCc
Confidence            54221        11233478999999999875   46889999999999999999999998876655554433222110


Q ss_pred             ------------------------------------------CCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCc
Q 014171          187 ------------------------------------------RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW  224 (429)
Q Consensus       187 ------------------------------------------~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~  224 (429)
                                                                ..+.+..+++.+++||.+||+.||.+|||++++|+|||
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~ell~hp~  336 (389)
T 3gni_B          257 LLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVEQCLQRNPDARPSASTLLNHSF  336 (389)
T ss_dssp             -------------------------------------------------CCHHHHHHHHHHTCSCTTTSCCHHHHTTSGG
T ss_pred             cccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHHHHhhcCcccCCCHHHHhcCHH
Confidence                                                      01123457889999999999999999999999999999


Q ss_pred             cccCCC
Q 014171          225 VREGGD  230 (429)
Q Consensus       225 ~~~~~~  230 (429)
                      |+....
T Consensus       337 f~~~~~  342 (389)
T 3gni_B          337 FKQIKR  342 (389)
T ss_dssp             GGGC--
T ss_pred             HHHHhh
Confidence            997654

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=100.00  E-value=1.2e-37  Score=307.09  Aligned_cols=189  Identities=38%  Similarity=0.664  Sum_probs=153.9

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++..  .+.+++..+..++.||+.||.|||++||+||||||+||+++..+....+||+|||+|.
T Consensus       213 ~~~lv~e~~~~g~L~~~l~~--~~~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~  290 (419)
T 3i6u_A          213 DYYIVLELMEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSK  290 (419)
T ss_dssp             EEEEEEECCTTCBGGGGTSS--SCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTT
T ss_pred             ceEEEEEcCCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccce
Confidence            34789999999999998843  4689999999999999999999999999999999999999865456679999999998


Q ss_pred             eccCCCcccccccCCccccccccc----CCCCCCcchHHHHHHHHHHhhCCCCCCCCChh-HHHHHHHhcCCCCCCCCCC
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLRNKPDFRRKPWP  192 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~----~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~  192 (429)
                      ...........+||+.|+|||++.    ..++.++||||+||++|+|++|..||.+.... .....+..+...+.+..++
T Consensus       291 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~~~~~~~~~~i~~~~~~~~~~~~~  370 (419)
T 3i6u_A          291 ILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWA  370 (419)
T ss_dssp             SCC-----------CTTCCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCCSSSCCHHHHHHTTCCCCCHHHHT
T ss_pred             ecCCCccccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCcchHHHHHHHhcCCCCCCchhhc
Confidence            876655556778999999999985    34577999999999999999999999775443 4455566666555555566


Q ss_pred             CCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          193 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       193 ~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      .+++.+.+||.+||+.||.+|||++++++||||++.
T Consensus       371 ~~~~~~~~li~~~L~~dP~~Rps~~e~l~hp~~~~~  406 (419)
T 3i6u_A          371 EVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE  406 (419)
T ss_dssp             TSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGCCH
T ss_pred             ccCHHHHHHHHHHccCChhHCcCHHHHhCCcccCCh
Confidence            789999999999999999999999999999999764

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=100.00  E-value=1.4e-36  Score=285.67  Aligned_cols=187  Identities=36%  Similarity=0.684  Sum_probs=168.2

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++...  ..+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||.+.
T Consensus        98 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~dfg~~~  172 (298)
T 1phk_A           98 FFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD---DDMNIKLTDFGFSC  172 (298)
T ss_dssp             EEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCCTTCE
T ss_pred             eEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEc---CCCcEEEecccchh
Confidence            457899999999999999665  6799999999999999999999999999999999999998   57889999999998


Q ss_pred             eccCCCcccccccCCccccccccc-------CCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCC
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLK-------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP  190 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~-------~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  190 (429)
                      ............|++.|+|||++.       ..++.++||||+|+++|+|++|..||.+.+.......+..+...++.+.
T Consensus       173 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  252 (298)
T 1phk_A          173 QLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPE  252 (298)
T ss_dssp             ECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCTTT
T ss_pred             hcCCCcccccccCCccccCHHHhccccccccccCCcccccHhHHHHHHHHHHCCCCCcCccHHHHHHHHhcCCcccCccc
Confidence            877666666678999999999874       2357899999999999999999999999888888888888887777666


Q ss_pred             CCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          191 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       191 ~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      ++.++..+.++|.+||+.||.+|||+.++++||||+...
T Consensus       253 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  291 (298)
T 1phk_A          253 WDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQYV  291 (298)
T ss_dssp             GGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTTC
T ss_pred             ccccCHHHHHHHHHHccCCcccCCCHHHHHhChHhhhcc
Confidence            678899999999999999999999999999999998764

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=100.00  E-value=5.9e-37  Score=288.45  Aligned_cols=181  Identities=28%  Similarity=0.542  Sum_probs=155.5

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|||||.+|+|.+++   ....+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++..
T Consensus       113 ~~lv~e~~~~~~l~~~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~---~~~~~kl~Dfg~~~~  186 (298)
T 2zv2_A          113 LYMVFELVNQGPVMEVP---TLKPLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVG---EDGHIKIADFGVSNE  186 (298)
T ss_dssp             EEEEEECCTTCBSCCSS---CSSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTSCEEECCCTTCEE
T ss_pred             EEEEEecCCCCcHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEC---CCCCEEEecCCCccc
Confidence            46899999999998754   235799999999999999999999999999999999999998   578999999999987


Q ss_pred             ccCCC-cccccccCCcccccccccCCC----CCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          119 IKPGK-KFQDIVGSAYYVAPEVLKRKS----GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       119 ~~~~~-~~~~~~g~~~y~aPE~~~~~~----~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      ..... ......||+.|+|||++.+..    +.++||||+||++|+|++|+.||.+.........+......++.  .+.
T Consensus       187 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~--~~~  264 (298)
T 2zv2_A          187 FKGSDALLSNTVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPD--QPD  264 (298)
T ss_dssp             CSSSSCEECCCCSCGGGCCGGGCCTTCCCEESHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCCS--SSC
T ss_pred             cccccccccCCcCCccccChhhhccCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCccHHHHHHHHhcccCCCCC--ccc
Confidence            65432 234567999999999987542    66789999999999999999999988877777777766554432  357


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhCCCcccc
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE  227 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~  227 (429)
                      ++++++++|.+||+.||.+|||+.++++||||++
T Consensus       265 ~~~~l~~li~~~l~~dp~~R~s~~e~l~hp~~~~  298 (298)
T 2zv2_A          265 IAEDLKDLITRMLDKNPESRIVVPEIKLHPWVTR  298 (298)
T ss_dssp             CCHHHHHHHHHHTCSCTTTSCCHHHHTTCHHHHC
T ss_pred             cCHHHHHHHHHHhhcChhhCCCHHHHhcCccccC
Confidence            8999999999999999999999999999999863

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=100.00  E-value=2e-37  Score=296.84  Aligned_cols=193  Identities=38%  Similarity=0.673  Sum_probs=138.1

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|||||.||+|.+++.......+++.++..++.||+.||.|||++||+||||||+||+++..+..+.+||+|||++..
T Consensus       101 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~  180 (336)
T 3fhr_A          101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKE  180 (336)
T ss_dssp             EEEEEECCTTEEHHHHHHTC-CCCCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEE
T ss_pred             EEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEecccccee
Confidence            46899999999999999876556899999999999999999999999999999999999998655567799999999986


Q ss_pred             ccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHH----HHHHHhcCCCCCCCCCCC
Q 014171          119 IKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGI----FKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       119 ~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~----~~~i~~~~~~~~~~~~~~  193 (429)
                      .... ......||+.|+|||++.+ .++.++||||+||++|+|++|..||.+......    ...+......++.+.+..
T Consensus       181 ~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  259 (336)
T 3fhr_A          181 TTQN-ALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSE  259 (336)
T ss_dssp             C-----------------------CHHHHHHHHHHHHHHHHHHHHSSCCC---------------------CCCTTTSTT
T ss_pred             cccc-ccccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCccchhhhhhHHHhhhccccccCchhhcc
Confidence            6533 2345678999999999854 457899999999999999999999977665443    333444445556666678


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCCC
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS  232 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~~  232 (429)
                      +++.+++||.+||+.||.+|||++++++||||+......
T Consensus       260 ~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~~  298 (336)
T 3fhr_A          260 VSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQSMVVP  298 (336)
T ss_dssp             CCHHHHHHHHHHSCSSGGGSCCHHHHHHSHHHHTGGGSC
T ss_pred             CCHHHHHHHHHHCCCChhHCcCHHHHhcCccccccccCC
Confidence            999999999999999999999999999999999865433

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=100.00  E-value=3.8e-37  Score=311.48  Aligned_cols=184  Identities=26%  Similarity=0.482  Sum_probs=159.7

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++   .++++||+|||+|.
T Consensus       258 ~l~lVmEy~~gg~L~~~l~~~~~~~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld---~~g~vKL~DFGla~  334 (576)
T 2acx_A          258 ALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLD---DHGHIRISDLGLAV  334 (576)
T ss_dssp             EEEEEECCCCSCBHHHHHHSSSSCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTSCEEECCCTTCE
T ss_pred             EEEEEEEcCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEe---CCCCeEEEecccce
Confidence            457899999999999999766555699999999999999999999999999999999999998   57899999999998


Q ss_pred             eccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCCh----hHHHHHHHhcCCCCCCCCCC
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFKEVLRNKPDFRRKPWP  192 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~----~~~~~~i~~~~~~~~~~~~~  192 (429)
                      ...........+||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+...    ..+...+......++    .
T Consensus       335 ~~~~~~~~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~~~~~~~~~~i~~~i~~~~~~~p----~  410 (576)
T 2acx_A          335 HVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVKEVPEEYS----E  410 (576)
T ss_dssp             ECCTTCCEECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSCSSSCCCHHHHHHHHHHCCCCCC----T
T ss_pred             ecccCccccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcccccchhHHHHHHHhhcccccCC----c
Confidence            8776665566789999999999875 468999999999999999999999987642    344555555544433    4


Q ss_pred             CCCHHHHHHHHHhccCCccCcC-----CHHHHhCCCccccC
Q 014171          193 SISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG  228 (429)
Q Consensus       193 ~~~~~~~~li~~~l~~dp~~R~-----s~~e~l~h~~~~~~  228 (429)
                      .+++++++||.+||+.||.+||     +++++++||||+..
T Consensus       411 ~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~HpfF~~i  451 (576)
T 2acx_A          411 RFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKL  451 (576)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTSGGGTTC
T ss_pred             cCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhChhhccC
Confidence            6899999999999999999999     79999999999874

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=100.00  E-value=1.7e-36  Score=292.09  Aligned_cols=216  Identities=24%  Similarity=0.367  Sum_probs=167.2

Q ss_pred             ccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 014171            8 DTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGL   87 (429)
Q Consensus         8 ~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i   87 (429)
                      .++|+|++.+++++......    ........|+|||||.| +|.+.+... ...+++..+..++.||+.||.|||++||
T Consensus        72 ~l~h~~iv~~~~~~~~~~~~----~~~~~~~~~lv~e~~~~-~l~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~i  145 (351)
T 3mi9_A           72 LLKHENVVNLIEICRTKASP----YNRCKGSIYLVFDFCEH-DLAGLLSNV-LVKFTLSEIKRVMQMLLNGLYYIHRNKI  145 (351)
T ss_dssp             HCCCTTBCCEEEEEEEC------------CEEEEEEECCSE-EHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             hccCCCcccHhheeeccccc----cccCCceEEEEEeccCC-CHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCe
Confidence            34566666555544432110    00112235789999984 888877554 3579999999999999999999999999


Q ss_pred             eecCCCCCcEEEeecCCCCCEEEeecccceeccCC-----CcccccccCCcccccccccC--CCCCCcchHHHHHHHHHH
Q 014171           88 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG-----KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYIL  160 (429)
Q Consensus        88 ~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~-----~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l  160 (429)
                      +||||||+||+++   .++.+||+|||+|......     .......||+.|+|||++.+  .++.++||||+||++|+|
T Consensus       146 vH~Dlkp~NIl~~---~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el  222 (351)
T 3mi9_A          146 LHRDMKAANVLIT---RDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEM  222 (351)
T ss_dssp             ECCCCSGGGEEEC---TTSCEEECCCTTCEECCCCSSSSCCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHH
T ss_pred             eCCCCCHHHEEEc---CCCCEEEccchhcccccccccccccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHH
Confidence            9999999999998   5789999999999876422     22345678999999998864  468999999999999999


Q ss_pred             hhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC----------------------------CHHHHHHHHHhccCCccC
Q 014171          161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI----------------------------SNSAKDFVKKLLVKDPRA  212 (429)
Q Consensus       161 ~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~----------------------------~~~~~~li~~~l~~dp~~  212 (429)
                      ++|++||.+.+.......+.......+...++..                            ++.+.+||.+||+.||.+
T Consensus       223 l~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  302 (351)
T 3mi9_A          223 WTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPAQ  302 (351)
T ss_dssp             HHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCSSGGG
T ss_pred             HhCCCCCCCCChHHHHHHHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcCChhh
Confidence            9999999998888877777654444444433332                            677999999999999999


Q ss_pred             cCCHHHHhCCCccccCCCCC
Q 014171          213 RLTAAQALSHPWVREGGDAS  232 (429)
Q Consensus       213 R~s~~e~l~h~~~~~~~~~~  232 (429)
                      |||++++++||||+....+.
T Consensus       303 R~t~~e~l~hp~f~~~~~~~  322 (351)
T 3mi9_A          303 RIDSDDALNHDFFWSDPMPS  322 (351)
T ss_dssp             SCCHHHHHTSGGGGSSSCCC
T ss_pred             CCCHHHHhCCCCcCCCCCcc
Confidence            99999999999998765443

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=100.00  E-value=2e-36  Score=283.96  Aligned_cols=187  Identities=24%  Similarity=0.410  Sum_probs=150.1

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.| +|.+.+... .+.+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++.
T Consensus        75 ~~~lv~e~~~~-~l~~~~~~~-~~~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~---~~~~~kl~Dfg~~~  149 (292)
T 3o0g_A           75 KLTLVFEFCDQ-DLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN---RNGELKLANFGLAR  149 (292)
T ss_dssp             EEEEEEECCSE-EHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTCE
T ss_pred             EEEEEEecCCC-CHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEeecccce
Confidence            35789999985 676666543 46899999999999999999999999999999999999998   57899999999998


Q ss_pred             eccCC-CcccccccCCcccccccccCC--CCCCcchHHHHHHHHHHhhCCCCC-CCCChhHHHHHHHhcCCCCCC-----
Q 014171          118 FIKPG-KKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPF-WDKTEDGIFKEVLRNKPDFRR-----  188 (429)
Q Consensus       118 ~~~~~-~~~~~~~g~~~y~aPE~~~~~--~~~~~DiwslG~il~~l~~g~~pf-~~~~~~~~~~~i~~~~~~~~~-----  188 (429)
                      ..... .......||+.|+|||++.+.  ++.++||||+||++|+|++|..|| .+.+.......+.........     
T Consensus       150 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~~  229 (292)
T 3o0g_A          150 AFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWPS  229 (292)
T ss_dssp             ECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCTT
T ss_pred             ecCCccccccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhhh
Confidence            76533 233456789999999998643  589999999999999999988875 455555555555432111111     


Q ss_pred             --------------------CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          189 --------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       189 --------------------~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                                          ...+.+++.+++||.+||+.||.+|||++++++||||++..
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  290 (292)
T 3o0g_A          230 MTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC  290 (292)
T ss_dssp             GGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTC-
T ss_pred             hcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCHHHHhcCcccccCC
Confidence                                11235789999999999999999999999999999998753

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=100.00  E-value=6.8e-37  Score=305.22  Aligned_cols=208  Identities=25%  Similarity=0.399  Sum_probs=155.4

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG   86 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~   86 (429)
                      +.++|+|++.+++++.........      ...|+|||||.+ +|.+.+.    ..+++..+..++.||+.||.|||++|
T Consensus       116 ~~l~hpnIv~l~~~~~~~~~~~~~------~~~~lv~E~~~~-~l~~~~~----~~l~~~~~~~~~~qil~aL~~lH~~~  184 (464)
T 3ttj_A          116 KCVNHKNIISLLNVFTPQKTLEEF------QDVYLVMELMDA-NLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG  184 (464)
T ss_dssp             HHCCCTTBCCCSEEECSCCSTTTC------CEEEEEEECCSE-EHHHHHT----SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HhCCCCCCCcEEEEEccCCccccC------CeEEEEEeCCCC-CHHHHHh----hcCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            345666666666655432211111      224689999986 4666662    35999999999999999999999999


Q ss_pred             CeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCC
Q 014171           87 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRR  165 (429)
Q Consensus        87 i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~  165 (429)
                      |+||||||+|||++   .++.+||+|||+|+...........+||+.|+|||++.+ .++.++||||+||++|+|++|++
T Consensus       185 iiHrDlkp~NIll~---~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~  261 (464)
T 3ttj_A          185 IIHRDLKPSNIVVK---SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI  261 (464)
T ss_dssp             CCCCCCCGGGEEEC---TTSCEEECCCCCC-----CCCC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSC
T ss_pred             cccCCCChHhEEEe---CCCCEEEEEEEeeeecCCCcccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCCC
Confidence            99999999999999   578999999999988766655667789999999999875 56899999999999999999999


Q ss_pred             CCCCCChhHHHHHHHhcCCC----------------------CCCCCC----CC------------CCHHHHHHHHHhcc
Q 014171          166 PFWDKTEDGIFKEVLRNKPD----------------------FRRKPW----PS------------ISNSAKDFVKKLLV  207 (429)
Q Consensus       166 pf~~~~~~~~~~~i~~~~~~----------------------~~~~~~----~~------------~~~~~~~li~~~l~  207 (429)
                      ||.+.+....+..+......                      +....+    +.            .++++++||.+||+
T Consensus       262 pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~  341 (464)
T 3ttj_A          262 LFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV  341 (464)
T ss_dssp             SSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHcC
Confidence            99998877776666542111                      110000    00            04678999999999


Q ss_pred             CCccCcCCHHHHhCCCccccC
Q 014171          208 KDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       208 ~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      .||.+|||++|+|+||||+..
T Consensus       342 ~dP~~R~ta~e~L~Hp~~~~~  362 (464)
T 3ttj_A          342 IDPAKRISVDDALQHPYINVW  362 (464)
T ss_dssp             SSTTTSCCHHHHHTSTTTGGG
T ss_pred             CChhhCCCHHHHhcChhhhhc
Confidence            999999999999999999864

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=100.00  E-value=2.5e-36  Score=282.96  Aligned_cols=184  Identities=17%  Similarity=0.257  Sum_probs=152.5

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~--i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      .|+|||||+||+|.+++...  ..+++..+..++.||+.||.|||++|  |+||||||+||+++.  .++.+||+|||++
T Consensus       104 ~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~--~~~~~kl~Dfg~~  179 (290)
T 1t4h_A          104 IVLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG--PTGSVKIGDLGLA  179 (290)
T ss_dssp             EEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESS--TTSCEEECCTTGG
T ss_pred             EEEEEEecCCCCHHHHHHHc--cCCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEEC--CCCCEEEeeCCCc
Confidence            46899999999999999665  67999999999999999999999999  999999999999973  4678999999999


Q ss_pred             eeccCCCcccccccCCcccccccccCCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCH
Q 014171          117 DFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN  196 (429)
Q Consensus       117 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  196 (429)
                      ...... ......|++.|+|||++.+.++.++||||+||++|+|++|+.||.+................ +.......++
T Consensus       180 ~~~~~~-~~~~~~~t~~y~aPE~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  257 (290)
T 1t4h_A          180 TLKRAS-FAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVK-PASFDKVAIP  257 (290)
T ss_dssp             GGCCTT-SBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHHHTTTCC-CGGGGGCCCH
T ss_pred             cccccc-ccccccCCcCcCCHHHHhccCCCcchHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHhccCC-ccccCCCCCH
Confidence            654433 33456789999999999888899999999999999999999999875554444333332211 1222245678


Q ss_pred             HHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          197 SAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       197 ~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      .+.++|.+||+.||.+|||++++++||||++.
T Consensus       258 ~l~~li~~~l~~dp~~Rps~~ell~h~~f~~~  289 (290)
T 1t4h_A          258 EVKEIIEGCIRQNKDERYSIKDLLNHAFFQEE  289 (290)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHTSGGGC--
T ss_pred             HHHHHHHHHccCChhhCCCHHHHhhCcccccC
Confidence            99999999999999999999999999999864

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=100.00  E-value=4.3e-37  Score=301.45  Aligned_cols=187  Identities=25%  Similarity=0.468  Sum_probs=158.4

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++.+. +..+++..++.++.||+.||.|||++||+||||||+|||++   .++++||+|||++.
T Consensus       135 ~~~lVmE~~~gg~L~~~l~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld---~~g~vkL~DFGla~  210 (412)
T 2vd5_A          135 YLYLVMEYYVGGDLLTLLSKF-GERIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLD---RCGHIRLADFGSCL  210 (412)
T ss_dssp             EEEEEECCCCSCBHHHHHHHH-SSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTCE
T ss_pred             EEEEEEcCCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeec---CCCCEEEeechhhe
Confidence            357899999999999999654 34799999999999999999999999999999999999998   57899999999998


Q ss_pred             eccCCCc--ccccccCCccccccccc--------CCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCC
Q 014171          118 FIKPGKK--FQDIVGSAYYVAPEVLK--------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR  187 (429)
Q Consensus       118 ~~~~~~~--~~~~~g~~~y~aPE~~~--------~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~  187 (429)
                      .......  ....+||+.|+|||++.        +.++.++|+||+||++|+|++|+.||.+.+..+.+.++........
T Consensus       211 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~  290 (412)
T 2vd5_A          211 KLRADGTVRSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLS  290 (412)
T ss_dssp             ECCTTSCEECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTHHHHCC
T ss_pred             eccCCCccccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHhcccCcC
Confidence            7754433  23468999999999986        3468899999999999999999999999998888888875432111


Q ss_pred             CC-CCCCCCHHHHHHHHHhccCCccCc---CCHHHHhCCCccccCC
Q 014171          188 RK-PWPSISNSAKDFVKKLLVKDPRAR---LTAAQALSHPWVREGG  229 (429)
Q Consensus       188 ~~-~~~~~~~~~~~li~~~l~~dp~~R---~s~~e~l~h~~~~~~~  229 (429)
                      .+ ....+++++++||.+||. +|.+|   ++++++++||||+...
T Consensus       291 ~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~Hpff~~i~  335 (412)
T 2vd5_A          291 LPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTHPFFFGLD  335 (412)
T ss_dssp             CC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTSGGGTTCC
T ss_pred             CCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcCCCcCCCC
Confidence            11 224689999999999999 99998   5999999999998764

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=100.00  E-value=2.2e-36  Score=287.71  Aligned_cols=186  Identities=30%  Similarity=0.559  Sum_probs=158.6

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||.||+|.+++..   ..+++..+..++.|++.||.|||++||+||||||+||+++   .++.+||+|||++
T Consensus       115 ~~~~lv~e~~~~~~L~~~l~~---~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~~  188 (321)
T 2c30_A          115 EELWVLMEFLQGGALTDIVSQ---VRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLT---LDGRVKLSDFGFC  188 (321)
T ss_dssp             TEEEEEECCCCSCBHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTC
T ss_pred             CEEEEEEecCCCCCHHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEC---CCCcEEEeeeeee
Confidence            345789999999999998732   4799999999999999999999999999999999999998   5789999999999


Q ss_pred             eeccCCC-cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~~~~~~-~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      ....... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+.........+........ .....+
T Consensus       189 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~  267 (321)
T 2c30_A          189 AQISKDVPKRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPPKL-KNSHKV  267 (321)
T ss_dssp             EECCSSSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSSCCCC-TTGGGS
T ss_pred             eecccCccccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhcCCCCCc-CccccC
Confidence            8765432 3345689999999999875 458899999999999999999999998888777777665543221 223457


Q ss_pred             CHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      ++.++++|.+||+.||.+|||+.++++||||....
T Consensus       268 ~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~  302 (321)
T 2c30_A          268 SPVLRDFLERMLVRDPQERATAQELLDHPFLLQTG  302 (321)
T ss_dssp             CHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGGGCC
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhcChhhccCC
Confidence            89999999999999999999999999999998754

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=100.00  E-value=2.4e-36  Score=281.48  Aligned_cols=183  Identities=27%  Similarity=0.562  Sum_probs=157.0

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.+|+|.+++...  ..+++..+..++.||+.||.|||++||+||||||+||+++   .++.++|+|||++.
T Consensus        83 ~~~lv~e~~~~~~l~~~l~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~---~~~~~~l~Dfg~~~  157 (279)
T 3fdn_A           83 RVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG---SAGELKIADFGWSV  157 (279)
T ss_dssp             EEEEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEEC---TTSCEEECSCCEES
T ss_pred             EEEEEEecCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEc---CCCCEEEEeccccc
Confidence            357899999999999999665  5799999999999999999999999999999999999998   57899999999986


Q ss_pred             eccCCCcccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCH
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN  196 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  196 (429)
                      ...... .....|++.|+|||++.+. ++.++||||+|+++|+|++|..||.+.+.......+......++    ..+++
T Consensus       158 ~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~  232 (279)
T 3fdn_A          158 HAPSSR-RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRVEFTFP----DFVTE  232 (279)
T ss_dssp             CC---------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC----TTSCH
T ss_pred             cCCccc-ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHhCCCCCC----CcCCH
Confidence            544332 2455789999999998754 48899999999999999999999999888888888877665544    35789


Q ss_pred             HHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          197 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       197 ~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                      .+++||.+||+.||.+|||+.++++||||+....
T Consensus       233 ~~~~li~~~l~~~p~~Rps~~e~l~h~~~~~~~~  266 (279)
T 3fdn_A          233 GARDLISRLLKHNPSQRPMLREVLEHPWITANSS  266 (279)
T ss_dssp             HHHHHHHHHCCSSGGGSCCHHHHHHCHHHHHHCS
T ss_pred             HHHHHHHHHhccChhhCCCHHHHhhCccccCCcc
Confidence            9999999999999999999999999999997654

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=100.00  E-value=9.7e-37  Score=290.36  Aligned_cols=186  Identities=32%  Similarity=0.552  Sum_probs=153.4

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++.  ....+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++.
T Consensus        79 ~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~---~~~~~kl~Dfg~a~  153 (323)
T 3tki_A           79 IQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLAT  153 (323)
T ss_dssp             EEEEEEECCTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCCTTCE
T ss_pred             eEEEEEEcCCCCcHHHHHh--hcCCCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEe---CCCCEEEEEeeccc
Confidence            3478999999999999884  346799999999999999999999999999999999999998   57899999999997


Q ss_pred             eccCCC---cccccccCCcccccccccCC--CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCC
Q 014171          118 FIKPGK---KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP  192 (429)
Q Consensus       118 ~~~~~~---~~~~~~g~~~y~aPE~~~~~--~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  192 (429)
                      ......   ......||+.|+|||++.+.  .+.++||||+||++|+|++|+.||.+................ ....+.
T Consensus       154 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~~~~~-~~~~~~  232 (323)
T 3tki_A          154 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT-YLNPWK  232 (323)
T ss_dssp             ECEETTEECCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCTTSHHHHHHHTTCT-TSTTGG
T ss_pred             eeccCCcccccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCchHHHHHHHHhcccc-cCCccc
Confidence            654222   23456899999999998653  266899999999999999999999876654333322222222 223346


Q ss_pred             CCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          193 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       193 ~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      .++..+.+||.+||+.||.+|||++++++||||+...
T Consensus       233 ~~~~~~~~li~~~L~~dP~~R~t~~eil~h~~~~~~~  269 (323)
T 3tki_A          233 KIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPL  269 (323)
T ss_dssp             GSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCC
T ss_pred             cCCHHHHHHHHHHccCChhhCcCHHHHhhChhhcccc
Confidence            7899999999999999999999999999999998754

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=100.00  E-value=2.6e-36  Score=288.19  Aligned_cols=190  Identities=24%  Similarity=0.380  Sum_probs=150.0

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecC--CCCCEEEeecc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK--EDSSLKATDFG  114 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~--~~~~~kL~Dfg  114 (429)
                      ...|+|||||. |+|.+++...  ..+++..+..++.||+.||.|||++||+||||||+||+++..+  ..+.+||+|||
T Consensus       106 ~~~~lv~e~~~-~~L~~~~~~~--~~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg  182 (329)
T 3gbz_A          106 HRLHLIFEYAE-NDLKKYMDKN--PDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFG  182 (329)
T ss_dssp             TEEEEEEECCS-EEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTT
T ss_pred             CEEEEEEecCC-CCHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCC
Confidence            34578999998 5999998654  5799999999999999999999999999999999999996421  34569999999


Q ss_pred             cceeccCC-CcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCC
Q 014171          115 LSDFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW  191 (429)
Q Consensus       115 ~a~~~~~~-~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  191 (429)
                      ++...... .......||+.|+|||++.+  .++.++||||+||++|+|++|..||.+.........+...........+
T Consensus       183 ~a~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  262 (329)
T 3gbz_A          183 LARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTW  262 (329)
T ss_dssp             HHHHHC-----------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTS
T ss_pred             CccccCCcccccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhh
Confidence            99876533 23345578999999999865  3689999999999999999999999998887777766543221111111


Q ss_pred             C--------------------------CCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          192 P--------------------------SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       192 ~--------------------------~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      +                          .+++++.+||.+||+.||.+|||++++++||||+...
T Consensus       263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~~  326 (329)
T 3gbz_A          263 PGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDPVKRISAKNALEHPYFSHND  326 (329)
T ss_dssp             TTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSSC
T ss_pred             hhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCChhhCCCHHHHhCCcccCCCC
Confidence            1                          1678999999999999999999999999999998753

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=100.00  E-value=3.4e-36  Score=296.85  Aligned_cols=215  Identities=23%  Similarity=0.320  Sum_probs=165.0

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHL   84 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~l~~~~~~~i~~qil~aL~~lH~   84 (429)
                      +.++|+|++.+..++..........+      .++|||||.+ +|.+.+..  .....+++..+..++.||+.||.|||+
T Consensus       102 ~~l~hpniv~l~~~~~~~~~~~~~~~------~~lv~e~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~  174 (420)
T 1j1b_A          102 RKLDHCNIVRLRYFFYSSGEKKDEVY------LNLVLDYVPE-TVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHS  174 (420)
T ss_dssp             HTCCCTTBCCEEEEEEEEETTTTEEE------EEEEEECCCE-EHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHcCCCCccceeeEEeccCCCCccee------EEeehhcccc-cHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            34556666665554432211111222      2479999985 67666643  234679999999999999999999999


Q ss_pred             CCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhh
Q 014171           85 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLC  162 (429)
Q Consensus        85 ~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~  162 (429)
                      +||+||||||+|||++.  +.+.+||+|||+++............||+.|+|||++.+  .++.++||||+||++|+|++
T Consensus       175 ~~ivHrDlkp~NILl~~--~~~~~kl~DFG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~  252 (420)
T 1j1b_A          175 FGICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL  252 (420)
T ss_dssp             TTEECSCCSGGGEEEET--TTTEEEECCCTTCEECCTTCCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH
T ss_pred             CCccccCCChhhEEEeC--CCCeEEeccchhhhhcccCCCceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHh
Confidence            99999999999999984  346789999999988765555566789999999999864  56899999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHhc------------CC-----CCCC---C-----CCCCCCHHHHHHHHHhccCCccCcCCHH
Q 014171          163 GRRPFWDKTEDGIFKEVLRN------------KP-----DFRR---K-----PWPSISNSAKDFVKKLLVKDPRARLTAA  217 (429)
Q Consensus       163 g~~pf~~~~~~~~~~~i~~~------------~~-----~~~~---~-----~~~~~~~~~~~li~~~l~~dp~~R~s~~  217 (429)
                      |+.||.+.+..+.+..+...            ..     .++.   .     ..+.+++++.+||.+||+.||.+|||+.
T Consensus       253 G~~pf~~~~~~~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~dP~~R~t~~  332 (420)
T 1j1b_A          253 GQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPL  332 (420)
T ss_dssp             SSCSSCCSSHHHHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccCChhHCCCHH
Confidence            99999988876666555431            11     1111   0     1135689999999999999999999999


Q ss_pred             HHhCCCccccCCC
Q 014171          218 QALSHPWVREGGD  230 (429)
Q Consensus       218 e~l~h~~~~~~~~  230 (429)
                      ++++||||+....
T Consensus       333 e~l~hp~f~~~~~  345 (420)
T 1j1b_A          333 EACAHSFFDELRD  345 (420)
T ss_dssp             HHHTSGGGGGGGC
T ss_pred             HHhCCHhhccccc
Confidence            9999999987543

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=1e-36  Score=297.75  Aligned_cols=184  Identities=30%  Similarity=0.426  Sum_probs=151.0

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|||||. |+|..++..   +.+++..+..++.||+.||.|||++||+||||||+|||++   .++.+||+|||+|+.
T Consensus        86 ~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~---~~~~~kl~DFG~a~~  158 (388)
T 3oz6_A           86 VYLVFDYME-TDLHAVIRA---NILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLN---AECHVKVADFGLSRS  158 (388)
T ss_dssp             EEEEEECCS-EEHHHHHHH---TCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCTTCEE
T ss_pred             EEEEecccC-cCHHHHHHc---CCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEc---CCCCEEecCCccccc
Confidence            468999998 689888854   4799999999999999999999999999999999999998   578999999999986


Q ss_pred             ccCC----------------------CcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhH
Q 014171          119 IKPG----------------------KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDG  174 (429)
Q Consensus       119 ~~~~----------------------~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~  174 (429)
                      ....                      ......+||+.|+|||++.+  .++.++||||+||++|+|++|++||.+.+...
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~  238 (388)
T 3oz6_A          159 FVNIRRVTNNIPLSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMN  238 (388)
T ss_dssp             SSSCCCCCCCGGGCCC---------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             ccccccccccccccccccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence            5321                      11234579999999999864  56899999999999999999999999988877


Q ss_pred             HHHHHHhcCCCCC--------------------------C-----------------CCCCCCCHHHHHHHHHhccCCcc
Q 014171          175 IFKEVLRNKPDFR--------------------------R-----------------KPWPSISNSAKDFVKKLLVKDPR  211 (429)
Q Consensus       175 ~~~~i~~~~~~~~--------------------------~-----------------~~~~~~~~~~~~li~~~l~~dp~  211 (429)
                      .+..+........                          .                 .....+++++.+||.+||+.||.
T Consensus       239 ~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~~L~~dP~  318 (388)
T 3oz6_A          239 QLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDKLLQFNPN  318 (388)
T ss_dssp             HHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHHHCCSSGG
T ss_pred             HHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHHhhccCcc
Confidence            7766653211000                          0                 01126789999999999999999


Q ss_pred             CcCCHHHHhCCCccccCC
Q 014171          212 ARLTAAQALSHPWVREGG  229 (429)
Q Consensus       212 ~R~s~~e~l~h~~~~~~~  229 (429)
                      +|||++++|+||||+...
T Consensus       319 ~R~t~~e~l~Hp~~~~~~  336 (388)
T 3oz6_A          319 KRISANDALKHPFVSIFH  336 (388)
T ss_dssp             GSCCHHHHTTSTTTTTTC
T ss_pred             cCCCHHHHhCCHHHHHhc
Confidence            999999999999998654

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=100.00  E-value=8e-37  Score=289.43  Aligned_cols=180  Identities=25%  Similarity=0.343  Sum_probs=148.1

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+||||| +|+|.+++... +..+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++.
T Consensus       131 ~~~lv~e~~-~~~L~~~~~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~---~~~~~kl~DFG~a~  205 (311)
T 3p1a_A          131 ILYLQTELC-GPSLQQHCEAW-GASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLG---PRGRCKLGDFGLLV  205 (311)
T ss_dssp             EEEEEEECC-CCBHHHHHHHH-CSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---GGGCEEECCCTTCE
T ss_pred             EEEEEEecc-CCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEC---CCCCEEEccceeee
Confidence            357899999 67999988765 36799999999999999999999999999999999999998   47889999999998


Q ss_pred             eccCCCcccccccCCcccccccccCCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHH
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS  197 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  197 (429)
                      ............||+.|+|||++.+.++.++||||+||++|+|++|..|+.+...   ...+....  .+......++++
T Consensus       206 ~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~---~~~~~~~~--~~~~~~~~~~~~  280 (311)
T 3p1a_A          206 ELGTAGAGEVQEGDPRYMAPELLQGSYGTAADVFSLGLTILEVACNMELPHGGEG---WQQLRQGY--LPPEFTAGLSSE  280 (311)
T ss_dssp             ECC------CCCCCGGGCCGGGGGTCCSTHHHHHHHHHHHHHHHHTCCCCSSHHH---HHHHTTTC--CCHHHHTTSCHH
T ss_pred             ecccCCCCcccCCCccccCHhHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCccH---HHHHhccC--CCcccccCCCHH
Confidence            7766555566679999999999998889999999999999999999877754322   22332222  122223468999


Q ss_pred             HHHHHHHhccCCccCcCCHHHHhCCCcccc
Q 014171          198 AKDFVKKLLVKDPRARLTAAQALSHPWVRE  227 (429)
Q Consensus       198 ~~~li~~~l~~dp~~R~s~~e~l~h~~~~~  227 (429)
                      +.++|.+||+.||.+|||++++++||||++
T Consensus       281 l~~li~~~L~~dP~~Rpt~~ell~hp~~~~  310 (311)
T 3p1a_A          281 LRSVLVMMLEPDPKLRATAEALLALPVLRQ  310 (311)
T ss_dssp             HHHHHHHHSCSSTTTSCCHHHHHTSGGGSC
T ss_pred             HHHHHHHHcCCChhhCcCHHHHHhCccccC
Confidence            999999999999999999999999999975

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=3.5e-36  Score=291.50  Aligned_cols=208  Identities=27%  Similarity=0.420  Sum_probs=164.0

Q ss_pred             ccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 014171            8 DTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGL   87 (429)
Q Consensus         8 ~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i   87 (429)
                      .++|+|++.+.+++.......      .....|+||||| |++|.+++..   ..+++..+..++.||+.||.|||++||
T Consensus        80 ~l~hpnIv~l~~~~~~~~~~~------~~~~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~~~~qi~~~L~~LH~~~i  149 (367)
T 1cm8_A           80 HMRHENVIGLLDVFTPDETLD------DFTDFYLVMPFM-GTDLGKLMKH---EKLGEDRIQFLVYQMLKGLRYIHAAGI  149 (367)
T ss_dssp             HCCBTTBCCCSEEECSCSSTT------TCCCCEEEEECC-SEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             hCCCcCCCCceeeEecCCccc------cCceEEEEEecC-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCc
Confidence            445666666555544321110      112347899999 8899998854   479999999999999999999999999


Q ss_pred             eecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCC
Q 014171           88 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRR  165 (429)
Q Consensus        88 ~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~  165 (429)
                      +||||||+||+++   .++.+||+|||+++.....  .....+|+.|+|||++.+  .++.++||||+||++|+|++|+.
T Consensus       150 vH~Dlkp~NIll~---~~~~~kl~Dfg~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~  224 (367)
T 1cm8_A          150 IHRDLKPGNLAVN---EDCELKILDFGLARQADSE--MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKT  224 (367)
T ss_dssp             ECCCCCGGGEEEC---TTCCEEECCCTTCEECCSS--CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSC
T ss_pred             cccCcCHHHEEEc---CCCCEEEEeeecccccccc--cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCC
Confidence            9999999999998   5789999999999876432  345678999999999865  56899999999999999999999


Q ss_pred             CCCCCChhHHHHHHHhcCC-----------------------CCCC----CCCCCCCHHHHHHHHHhccCCccCcCCHHH
Q 014171          166 PFWDKTEDGIFKEVLRNKP-----------------------DFRR----KPWPSISNSAKDFVKKLLVKDPRARLTAAQ  218 (429)
Q Consensus       166 pf~~~~~~~~~~~i~~~~~-----------------------~~~~----~~~~~~~~~~~~li~~~l~~dp~~R~s~~e  218 (429)
                      ||.+.+....+..+.....                       ....    ..++..++.+.+||.+||..||.+|||+++
T Consensus       225 pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~e  304 (367)
T 1cm8_A          225 LFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGE  304 (367)
T ss_dssp             SSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHHH
T ss_pred             CCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHHH
Confidence            9998887766665543211                       1111    123467899999999999999999999999


Q ss_pred             HhCCCccccCCC
Q 014171          219 ALSHPWVREGGD  230 (429)
Q Consensus       219 ~l~h~~~~~~~~  230 (429)
                      +|+||||+....
T Consensus       305 ~l~hp~f~~~~~  316 (367)
T 1cm8_A          305 ALAHPYFESLHD  316 (367)
T ss_dssp             HHHSGGGTTTC-
T ss_pred             HhcChHHHhhcC
Confidence            999999987543

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=5.8e-37  Score=294.46  Aligned_cols=192  Identities=35%  Similarity=0.582  Sum_probs=160.3

Q ss_pred             cceeEeeecCCCChHHHHHhhc--------------------------------------CCCCCHHHHHHHHHHHHHHH
Q 014171           38 RKLRRIRLCEGGELLDRILAKK--------------------------------------DSRYTEKDAAVVVRQMLRVA   79 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~--------------------------------------~~~l~~~~~~~i~~qil~aL   79 (429)
                      ..|+|||||+||+|.+++....                                      ...+++..+..++.||+.||
T Consensus       102 ~~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l  181 (345)
T 3hko_A          102 YICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSAL  181 (345)
T ss_dssp             EEEEEEECCCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred             eEEEEEeCCCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHH
Confidence            3568999999999999884210                                      12246888999999999999


Q ss_pred             HHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCC-----cccccccCCccccccccc---CCCCCCcchH
Q 014171           80 AECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVLK---RKSGPESDVW  151 (429)
Q Consensus        80 ~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~-----~~~~~~g~~~y~aPE~~~---~~~~~~~Diw  151 (429)
                      .|||++||+||||||+||+++.. ....+||+|||++.......     ......||+.|+|||++.   ..++.++|||
T Consensus       182 ~~LH~~~ivH~Dlkp~NIll~~~-~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~Diw  260 (345)
T 3hko_A          182 HYLHNQGICHRDIKPENFLFSTN-KSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAW  260 (345)
T ss_dssp             HHHHHTTEECCCCCGGGEEESCS-SSCCEEECCCTTCEEGGGTTCC--------CCCGGGCCHHHHTCSSSCCCTHHHHH
T ss_pred             HHHHHCCccccCCChhhEEEecC-CCceEEEeeccccccccccCccccccccccCCCccccCchhhccCCCCCCcHHHHH
Confidence            99999999999999999999842 23489999999998654321     124567899999999986   3568899999


Q ss_pred             HHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          152 SIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       152 slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                      |+||++|+|++|+.||.+.........+......++.+.+..+++.+++||.+||+.||.+|||+.++++||||+....
T Consensus       261 slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~hp~~~~~~~  339 (345)
T 3hko_A          261 SAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENPNYNVLSPLARDLLSNLLNRNVDERFDAMRALQHPWISQFSD  339 (345)
T ss_dssp             HHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCTTSGGGGGSCHHHHHHHHHHSCSCTTTSCCHHHHHHSHHHHTTSS
T ss_pred             HHHHHHHHHHHCCCCCCCCChHHHHHHHHhcccccCCcccccCCHHHHHHHHHHcCCChhHCCCHHHHhcChhhccChH
Confidence            9999999999999999999999888888888877776666678999999999999999999999999999999988653

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=100.00  E-value=7.6e-37  Score=290.95  Aligned_cols=188  Identities=38%  Similarity=0.668  Sum_probs=158.7

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|||||.||+|.+++..  ...+++..+..++.||+.||.|||++||+||||||+||+++..+....+||+|||++..
T Consensus        89 ~~lv~e~~~~~~L~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~  166 (322)
T 2ycf_A           89 YYIVLELMEGGELFDKVVG--NKRLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKI  166 (322)
T ss_dssp             EEEEEECCTTEETHHHHST--TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEE
T ss_pred             eEEEEecCCCCcHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCcccee
Confidence            5789999999999998854  46899999999999999999999999999999999999998644455799999999987


Q ss_pred             ccCCCcccccccCCccccccccc----CCCCCCcchHHHHHHHHHHhhCCCCCCCCChh-HHHHHHHhcCCCCCCCCCCC
Q 014171          119 IKPGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       119 ~~~~~~~~~~~g~~~y~aPE~~~----~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~~~~~~~~~~~~~~  193 (429)
                      ...........|++.|+|||++.    ..++.++||||+||++|+|++|..||...... .....+..+...+.+..+..
T Consensus       167 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (322)
T 2ycf_A          167 LGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAE  246 (322)
T ss_dssp             CCCCHHHHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHHHHHHSSCSSCSTTCSSCHHHHHHHTCCCCCHHHHTT
T ss_pred             cccccccccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchHHHHHHHHHhCccccCchhhhh
Confidence            76554445567899999999973    45688999999999999999999999766543 44455555555444444567


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      ++..+.+||.+||..||.+|||++++++||||+..
T Consensus       247 ~~~~~~~li~~~l~~dP~~Rps~~~~l~h~~~~~~  281 (322)
T 2ycf_A          247 VSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDE  281 (322)
T ss_dssp             SCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGCCH
T ss_pred             cCHHHHHHHHHHcccCHhhCCCHHHHhhCcCcCCH
Confidence            89999999999999999999999999999999763

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=100.00  E-value=2.3e-36  Score=292.13  Aligned_cols=186  Identities=23%  Similarity=0.348  Sum_probs=153.7

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeec---------------
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA---------------  102 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~---------------  102 (429)
                      ..|+||||| ||+|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++..               
T Consensus       110 ~~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~  188 (360)
T 3llt_A          110 HMCLIFEPL-GPSLYEIITRNNYNGFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDG  188 (360)
T ss_dssp             EEEEEECCC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTC
T ss_pred             eeEEEEcCC-CCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhccccc
Confidence            457899999 8999999987766679999999999999999999999999999999999999731               


Q ss_pred             -------CCCCCEEEeecccceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhH
Q 014171          103 -------KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDG  174 (429)
Q Consensus       103 -------~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~  174 (429)
                             ...+.+||+|||+|......  .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+.+...
T Consensus       189 ~~~~~~~~~~~~~kl~DFG~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~  266 (360)
T 3llt_A          189 KKIQIYRTKSTGIKLIDFGCATFKSDY--HGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFRTHEHME  266 (360)
T ss_dssp             CEEEEEEESCCCEEECCCTTCEETTSC--CCSCCSCGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHH
T ss_pred             ccccccccCCCCEEEEeccCceecCCC--CcCccCcccccCcHHHcCCCCCCccchHHHHHHHHHHHHCCCCCCCCcHHH
Confidence                   13678999999999865432  345678999999999875 56899999999999999999999999888777


Q ss_pred             HHHHHHhcCCCCCCC---------------------CCC---------------------CCCHHHHHHHHHhccCCccC
Q 014171          175 IFKEVLRNKPDFRRK---------------------PWP---------------------SISNSAKDFVKKLLVKDPRA  212 (429)
Q Consensus       175 ~~~~i~~~~~~~~~~---------------------~~~---------------------~~~~~~~~li~~~l~~dp~~  212 (429)
                      ....+......++..                     .|+                     ..++.+.+||.+||+.||.+
T Consensus       267 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~  346 (360)
T 3llt_A          267 HLAMMESIIQPIPKNMLYEATKTNGSKYVNKDELKLAWPENASSINSIKHVKKCLPLYKIIKHELFCDFLYSILQIDPTL  346 (360)
T ss_dssp             HHHHHHHHTCCCCHHHHHHHTTSGGGGGEETTTTEECTTTTCSCHHHHHHHHTCCCHHHHCCCHHHHHHHHHHCCSSGGG
T ss_pred             HHHHHHHhcCCCCHHHHhhhhhccCccccCcccceecCcccccchhhhhhhhhcccccccchHHHHHHHHHHHhcCChhh
Confidence            766655443322210                     000                     12367889999999999999


Q ss_pred             cCCHHHHhCCCccc
Q 014171          213 RLTAAQALSHPWVR  226 (429)
Q Consensus       213 R~s~~e~l~h~~~~  226 (429)
                      |||++++|+||||+
T Consensus       347 Rpta~elL~hp~f~  360 (360)
T 3llt_A          347 RPSPAELLKHKFLE  360 (360)
T ss_dssp             SCCHHHHTTSGGGC
T ss_pred             CCCHHHHhcCcccC
Confidence            99999999999996

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=100.00  E-value=4.6e-36  Score=311.87  Aligned_cols=182  Identities=26%  Similarity=0.473  Sum_probs=163.8

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++...  +.+++..++.++.||+.||.|||++||+||||||+|||++   .++++||+|||+|+
T Consensus       416 ~~~lV~E~~~gg~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~---~~g~ikL~DFGla~  490 (674)
T 3pfq_A          416 RLYFVMEYVNGGDLMYHIQQV--GRFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLD---SEGHIKIADFGMCK  490 (674)
T ss_dssp             EEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEEC---SSSCEEECCCTTCE
T ss_pred             EEEEEEeCcCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEc---CCCcEEEeecceee
Confidence            357899999999999999765  6799999999999999999999999999999999999998   57899999999998


Q ss_pred             ecc-CCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIK-PGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~-~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      ... ........+||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+.+..++...+......++.    .++
T Consensus       491 ~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~p~----~~s  566 (674)
T 3pfq_A          491 ENIWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEHNVAYPK----SMS  566 (674)
T ss_dssp             ECCCTTCCBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSSCCCCCT----TSC
T ss_pred             ccccCCcccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhCCCCCCc----cCC
Confidence            643 3344566789999999999874 5689999999999999999999999999999999999988776653    689


Q ss_pred             HHHHHHHHHhccCCccCcCCH-----HHHhCCCccccC
Q 014171          196 NSAKDFVKKLLVKDPRARLTA-----AQALSHPWVREG  228 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~-----~e~l~h~~~~~~  228 (429)
                      +++++||.+||+.||.+||++     +++++||||+..
T Consensus       567 ~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~h~ff~~i  604 (674)
T 3pfq_A          567 KEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYI  604 (674)
T ss_dssp             HHHHHHHHHHSCSSSTTCTTCSTTHHHHHHSSGGGSSC
T ss_pred             HHHHHHHHHHccCCHHHCCCCCCCcHHHHhcCccccCC
Confidence            999999999999999999997     999999999874

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=100.00  E-value=1.5e-36  Score=283.23  Aligned_cols=191  Identities=37%  Similarity=0.655  Sum_probs=160.9

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecC-CCCCEEEeeccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK-EDSSLKATDFGL  115 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~-~~~~~kL~Dfg~  115 (429)
                      ...|+|||||.+|+|.+++...  ..+++..+..++.||+.||.|||++||+||||||+||+++..+ ....+||+|||.
T Consensus        81 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~  158 (283)
T 3bhy_A           81 TDVVLILELVSGGELFDFLAEK--ESLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGI  158 (283)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred             CeEEEEEeecCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEeccc
Confidence            3457899999999999999655  5799999999999999999999999999999999999998522 123799999999


Q ss_pred             ceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          116 SDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       116 a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      +.............|++.|+|||++.+ .++.++|+||+|+++|+|++|..||.+.........+......++...++.+
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  238 (283)
T 3bhy_A          159 AHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGETKQETLTNISAVNYDFDEEYFSNT  238 (283)
T ss_dssp             CEECC--------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCCHHHHTTC
T ss_pred             ceeccCCCcccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhHhcccCCcchhcccC
Confidence            987765555556679999999999874 4688999999999999999999999998888888888777665554445678


Q ss_pred             CHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      +..+.++|.+||..||.+|||+.++++||||+...
T Consensus       239 ~~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  273 (283)
T 3bhy_A          239 SELAKDFIRRLLVKDPKRRMTIAQSLEHSWIKAIR  273 (283)
T ss_dssp             CHHHHHHHHTTSCSSGGGSCCHHHHHHCHHHHHHH
T ss_pred             CHHHHHHHHHHccCCHhHCcCHHHHHhCHHHHHHH
Confidence            99999999999999999999999999999998753

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=100.00  E-value=1e-35  Score=277.99  Aligned_cols=183  Identities=28%  Similarity=0.557  Sum_probs=160.0

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.+|+|.+++...  +.+++..+..++.||+.||.|||++||+||||||+||+++   .++.++|+|||.+.
T Consensus        88 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~Dfg~~~  162 (284)
T 2vgo_A           88 RIYLMLEFAPRGELYKELQKH--GRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMG---YKGELKIADFGWSV  162 (284)
T ss_dssp             EEEEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEEC---TTCCEEECCCTTCE
T ss_pred             EEEEEEEeCCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEc---CCCCEEEecccccc
Confidence            357899999999999999765  5799999999999999999999999999999999999998   57899999999987


Q ss_pred             eccCCCcccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCH
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN  196 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  196 (429)
                      ..... ......|++.|+|||++.+. ++.++|+||+|+++|+|++|..||...........+......++    +.++.
T Consensus       163 ~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~----~~~~~  237 (284)
T 2vgo_A          163 HAPSL-RRRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVNVDLKFP----PFLSD  237 (284)
T ss_dssp             ECSSS-CBCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC----TTSCH
T ss_pred             cCccc-ccccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCCCCHhHHHHHHhccccCCC----CcCCH
Confidence            65433 23456789999999998754 58899999999999999999999998888887777776655443    45799


Q ss_pred             HHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          197 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       197 ~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                      .++++|.+||+.||.+|||++++++||||+....
T Consensus       238 ~~~~li~~~l~~~p~~Rps~~~ll~h~~~~~~~~  271 (284)
T 2vgo_A          238 GSKDLISKLLRYHPPQRLPLKGVMEHPWVKANSR  271 (284)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHTCHHHHHHCC
T ss_pred             HHHHHHHHHhhcCHhhCCCHHHHhhCHHHHhhcc
Confidence            9999999999999999999999999999997543

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=100.00  E-value=4.7e-36  Score=292.49  Aligned_cols=187  Identities=24%  Similarity=0.388  Sum_probs=156.7

Q ss_pred             ceeEeeecCCCChHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           39 KLRRIRLCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~--~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      .++|||||. |+|.+.+..  ..+..+++..+..++.||+.||.|||++||+||||||+||+++.  .++.+||+|||+|
T Consensus       113 ~~lv~e~~~-~~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~gi~H~Dikp~Nil~~~--~~~~~kl~Dfg~a  189 (383)
T 3eb0_A          113 LNVIMEYVP-DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNS--KDNTLKLCDFGSA  189 (383)
T ss_dssp             EEEEECCCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEEET--TTTEEEECCCTTC
T ss_pred             EEEEEecCC-ccHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCcCccCccCHHHEEEcC--CCCcEEEEECCCC
Confidence            468999998 588877754  34578999999999999999999999999999999999999973  4678999999999


Q ss_pred             eeccCCCcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCC----------
Q 014171          117 DFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP----------  184 (429)
Q Consensus       117 ~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~----------  184 (429)
                      .............||+.|+|||++.+  .++.++||||+||++|+|++|+.||.+.+..+....+.....          
T Consensus       190 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~g~p~~~~~~~~  269 (383)
T 3eb0_A          190 KKLIPSEPSVAYICSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPTKEQMIRM  269 (383)
T ss_dssp             EECCTTSCCCCCCCCSSCCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred             cccCCCCCCcCcccCCCccCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHHh
Confidence            98766666667788999999998864  468999999999999999999999999888777666543110          


Q ss_pred             -------CCCC---C-----CCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          185 -------DFRR---K-----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       185 -------~~~~---~-----~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                             .++.   .     ....+++++.+||.+||+.||.+|||+.++++||||+..
T Consensus       270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~f~~~  328 (383)
T 3eb0_A          270 NPHYTEVRFPTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMAHPFFDHL  328 (383)
T ss_dssp             CTTC--CCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGHHH
T ss_pred             CcccccccCCccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCHHHHHH
Confidence                   0110   0     123478899999999999999999999999999999864

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=100.00  E-value=7.2e-36  Score=277.67  Aligned_cols=183  Identities=35%  Similarity=0.596  Sum_probs=151.2

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++...  +.+++..+..++.||+.||.|||++||+||||||+||+++   .++.++|+|||.+.
T Consensus        85 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~~l~dfg~~~  159 (276)
T 2h6d_A           85 DFFMVMEYVSGGELFDYICKH--GRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLD---AHMNAKIADFGLSN  159 (276)
T ss_dssp             EEEEEEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEEC---TTSCEEECCCCGGG
T ss_pred             eEEEEEeccCCCcHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEEC---CCCCEEEeeccccc
Confidence            457899999999999999665  5799999999999999999999999999999999999998   57889999999998


Q ss_pred             eccCCCcccccccCCcccccccccCCC--CCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      ............|++.|+|||++.+..  +.++|+||+|+++|+|++|+.||.+.........+.......+    ..++
T Consensus       160 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~  235 (276)
T 2h6d_A          160 MMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRGGVFYIP----EYLN  235 (276)
T ss_dssp             CCCC-------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSC
T ss_pred             ccCCCcceecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhcCcccCc----hhcC
Confidence            776555555667899999999997643  5789999999999999999999988888777777776654433    3578


Q ss_pred             HHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          196 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      ..+.++|.+||+.||.+|||+.++++||||+...
T Consensus       236 ~~l~~li~~~l~~~p~~Rps~~~~l~h~~~~~~~  269 (276)
T 2h6d_A          236 RSVATLLMHMLQVDPLKRATIKDIREHEWFKQDL  269 (276)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHHSHHHHTTC
T ss_pred             HHHHHHHHHHccCChhhCCCHHHHHhChhhccCc
Confidence            9999999999999999999999999999998753

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=100.00  E-value=1.1e-35  Score=300.02  Aligned_cols=184  Identities=26%  Similarity=0.463  Sum_probs=158.0

Q ss_pred             cceeEeeecCCCChHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           38 RKLRRIRLCEGGELLDRILAKK--DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      ..|+|||||+||+|.+++....  ...+++..++.++.||+.||.|||++||+||||||+||+++   .++++||+|||+
T Consensus       259 ~l~lVmE~~~gg~L~~~l~~~~~~~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~---~~g~vkL~DFGl  335 (543)
T 3c4z_A          259 DLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLD---DDGNVRISDLGL  335 (543)
T ss_dssp             EEEEEECCCTTCBHHHHHHTSSTTSCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTSCEEECCCTT
T ss_pred             EEEEEEEeccCCCHHHHHHHhhcccccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEe---CCCCEEEeecce
Confidence            3578999999999999987643  35799999999999999999999999999999999999998   578999999999


Q ss_pred             ceeccCCCc-ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCC----hhHHHHHHHhcCCCCCCC
Q 014171          116 SDFIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKT----EDGIFKEVLRNKPDFRRK  189 (429)
Q Consensus       116 a~~~~~~~~-~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~----~~~~~~~i~~~~~~~~~~  189 (429)
                      +........ ....+||+.|+|||++.+ .++.++|+||+||++|+|++|++||.+..    .......+......++  
T Consensus       336 a~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~~~~~~~~~~~~~i~~~~~~~p--  413 (543)
T 3c4z_A          336 AVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRVLEQAVTYP--  413 (543)
T ss_dssp             CEECCTTCCCBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCTTCCCCHHHHHHHHHHCCCCCC--
T ss_pred             eeeccCCCcccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCCccchhHHHHHHHHhhcccCCC--
Confidence            987765433 344589999999999975 46899999999999999999999998753    3456666666655444  


Q ss_pred             CCCCCCHHHHHHHHHhccCCccCcCC-----HHHHhCCCccccC
Q 014171          190 PWPSISNSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG  228 (429)
Q Consensus       190 ~~~~~~~~~~~li~~~l~~dp~~R~s-----~~e~l~h~~~~~~  228 (429)
                        +.+++.+++||.+||+.||.+||+     ++++++||||+..
T Consensus       414 --~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~Hpff~~i  455 (543)
T 3c4z_A          414 --DKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHPLFRDI  455 (543)
T ss_dssp             --TTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHTSGGGTTC
T ss_pred             --cccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHcCccccCC
Confidence              468999999999999999999995     5899999999874

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=100.00  E-value=8.5e-36  Score=277.53  Aligned_cols=184  Identities=30%  Similarity=0.549  Sum_probs=132.3

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.+|+|.+++... ...+++..+..++.|++.||.|||++||+||||||+||+++   .++.+||+|||.+.
T Consensus        85 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~---~~~~~kl~dfg~~~  160 (278)
T 3cok_A           85 YVYLVLEMCHNGEMNRYLKNR-VKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLT---RNMNIKIADFGLAT  160 (278)
T ss_dssp             EEEEEEECCTTEEHHHHHHTC-SSCCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEEC---TTCCEEECCCTTCE
T ss_pred             eEEEEEecCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEc---CCCCEEEEeeccee
Confidence            356899999999999988653 36799999999999999999999999999999999999998   57899999999998


Q ss_pred             eccCC-CcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIKPG-KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~~~-~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      ..... .......|++.|+|||++.+ .++.++|+||+|+++|+|++|+.||...........+......    ....++
T Consensus       161 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~----~~~~~~  236 (278)
T 3cok_A          161 QLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTLNKVVLADYE----MPSFLS  236 (278)
T ss_dssp             ECC----------------------------CTHHHHHHHHHHHHHHSSCSSCCCSCC-----CCSSCCC----CCTTSC
T ss_pred             eccCCCCcceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCChhHHHHHHHHhhcccC----CccccC
Confidence            76532 22334578999999999875 4588999999999999999999999877665555444333222    224578


Q ss_pred             HHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          196 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      .+++++|.+||+.||.+|||++++++||||....
T Consensus       237 ~~~~~li~~~l~~dp~~Rps~~~~l~h~~~~~~~  270 (278)
T 3cok_A          237 IEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNS  270 (278)
T ss_dssp             HHHHHHHHHHSCSSGGGSCCHHHHTTSTTTC---
T ss_pred             HHHHHHHHHHcccCHhhCCCHHHHhcCccccCCC
Confidence            9999999999999999999999999999998754

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=100.00  E-value=5.1e-36  Score=283.67  Aligned_cols=188  Identities=29%  Similarity=0.459  Sum_probs=149.6

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..++|||||.+|+|.+++...  ..+++..+..++.|++.||.|||++||+||||||+||+++   .++.+||+|||.+.
T Consensus        76 ~~~lv~e~~~~~~l~~~~~~~--~~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~~~  150 (311)
T 4agu_A           76 RLHLVFEYCDHTVLHELDRYQ--RGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILIT---KHSVIKLCDFGFAR  150 (311)
T ss_dssp             EEEEEEECCSEEHHHHHHHTS--SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTCE
T ss_pred             eEEEEEEeCCCchHHHHHhhh--cCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEc---CCCCEEEeeCCCch
Confidence            457899999999998877443  6799999999999999999999999999999999999998   57899999999998


Q ss_pred             eccCC-CcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCC---------
Q 014171          118 FIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD---------  185 (429)
Q Consensus       118 ~~~~~-~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~---------  185 (429)
                      ..... .......|++.|+|||++.+  .++.++||||+|+++|+|++|..||.+.........+......         
T Consensus       151 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (311)
T 4agu_A          151 LLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQVF  230 (311)
T ss_dssp             ECC------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHH
T ss_pred             hccCcccccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhccccccccccc
Confidence            76533 23345678999999999864  4589999999999999999999999988877665544332110         


Q ss_pred             ----------CCCC--------CCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          186 ----------FRRK--------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       186 ----------~~~~--------~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                                .+.+        .++.++.++.+||.+||+.||.+|||++++++||||++...
T Consensus       231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  293 (311)
T 4agu_A          231 STNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHPYFENIRE  293 (311)
T ss_dssp             HTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTSGGGTTCC-
T ss_pred             ccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcChHHHhccC
Confidence                      1100        12467899999999999999999999999999999998654

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=100.00  E-value=2.2e-36  Score=286.41  Aligned_cols=185  Identities=25%  Similarity=0.414  Sum_probs=153.3

Q ss_pred             eeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccceec
Q 014171           40 LRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI  119 (429)
Q Consensus        40 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~  119 (429)
                      |+|||||+||+|.+++...  +.+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++...
T Consensus        92 ~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~a~~~  166 (311)
T 3ork_A           92 YIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS---ATNAVKVMDFGIARAI  166 (311)
T ss_dssp             EEEEECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE---TTSCEEECCCSCC---
T ss_pred             EEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEc---CCCCEEEeeccCcccc
Confidence            7899999999999999665  6799999999999999999999999999999999999998   5788999999999766


Q ss_pred             cCCC----cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          120 KPGK----KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       120 ~~~~----~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      ....    ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+.................+....+.+
T Consensus       167 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (311)
T 3ork_A          167 ADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEGL  246 (311)
T ss_dssp             ---------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCHHHHSTTC
T ss_pred             cccccccccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCCCcccccCCC
Confidence            4332    2234568999999999875 4588999999999999999999999998888877777766554443344568


Q ss_pred             CHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      +.++.++|.+||+.||.+||++.+++.|+|++...
T Consensus       247 ~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~~~  281 (311)
T 3ork_A          247 SADLDAVVLKALAKNPENRYQTAAEMRADLVRVHN  281 (311)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHHHT
T ss_pred             CHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHHhc
Confidence            99999999999999999999999999999998643

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.2e-35  Score=285.72  Aligned_cols=190  Identities=23%  Similarity=0.318  Sum_probs=156.5

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||.+ +|.+++... ...+++..+..++.|++.||.|||++||+||||||+||+++   .++.+||+|||++
T Consensus        85 ~~~~lv~e~~~~-~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~---~~~~~kl~Dfg~a  159 (346)
T 1ua2_A           85 SNISLVFDFMET-DLEVIIKDN-SLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLD---ENGVLKLADFGLA  159 (346)
T ss_dssp             TCCEEEEECCSE-EHHHHHTTC-CSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTCCEEECCCGGG
T ss_pred             CceEEEEEcCCC-CHHHHHHhc-CcCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEc---CCCCEEEEecccc
Confidence            345789999985 888877443 35799999999999999999999999999999999999998   5789999999999


Q ss_pred             eeccCC-CcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCC---
Q 014171          117 DFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP---  190 (429)
Q Consensus       117 ~~~~~~-~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~---  190 (429)
                      ...... .......||+.|+|||++.+  .++.++||||+||++|+|++|.+||.+.+.......+...........   
T Consensus       160 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~  239 (346)
T 1ua2_A          160 KSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPD  239 (346)
T ss_dssp             STTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSS
T ss_pred             eeccCCcccCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhhh
Confidence            876433 33455678999999999864  358899999999999999999999999888877777665321111111   


Q ss_pred             ---------------------CCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCC
Q 014171          191 ---------------------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA  231 (429)
Q Consensus       191 ---------------------~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~  231 (429)
                                           ++.++.++++||.+||+.||.+|||++|+++||||+.....
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h~~f~~~~~~  301 (346)
T 1ua2_A          240 MCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPGP  301 (346)
T ss_dssp             TTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSSCC
T ss_pred             hccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhCCCHHHHhcChhhhcCCCC
Confidence                                 14567899999999999999999999999999999976543

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=100.00  E-value=1.6e-35  Score=282.19  Aligned_cols=209  Identities=26%  Similarity=0.420  Sum_probs=161.9

Q ss_pred             ccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCee
Q 014171           10 RSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVH   89 (429)
Q Consensus        10 ~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H   89 (429)
                      +|+|++.+++.+....+.+.      ....|+|||||.+|+|.+++...+...+++..+..++.||+.||.|||++||+|
T Consensus        79 ~h~~i~~~~~~~~~~~~~~~------~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH  152 (326)
T 2x7f_A           79 HHRNIATYYGAFIKKNPPGM------DDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIH  152 (326)
T ss_dssp             CSTTBCCEEEEEEECC--CC------CCEEEEEEECCTTEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred             CCCCeeeeeeEEeeccCccc------cceEEEEEEcCCCCcHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCccc
Confidence            56666666555543222111      123468999999999999998766678999999999999999999999999999


Q ss_pred             cCCCCCcEEEeecCCCCCEEEeecccceeccCC-CcccccccCCccccccccc------CCCCCCcchHHHHHHHHHHhh
Q 014171           90 RDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLC  162 (429)
Q Consensus        90 ~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~~~------~~~~~~~DiwslG~il~~l~~  162 (429)
                      |||||+||+++   .++.+||+|||++...... .......|++.|+|||++.      ..++.++||||+||++|+|++
T Consensus       153 ~dlkp~NIl~~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~  229 (326)
T 2x7f_A          153 RDIKGQNVLLT---ENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAE  229 (326)
T ss_dssp             CCCSGGGEEEC---TTCCEEECCCTTTC-------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHHH
T ss_pred             cCCcHHHEEEc---CCCCEEEeeCcCceecCcCccccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHHh
Confidence            99999999998   5788999999998766432 2234557899999999985      346889999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       163 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      |..||.+.........+......  ......++..+++||.+||..||.+|||+.++++||||+...
T Consensus       230 g~~p~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~  294 (326)
T 2x7f_A          230 GAPPLCDMHPMRALFLIPRNPAP--RLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQP  294 (326)
T ss_dssp             SSCTTTTSCHHHHHHHHHHSCCC--CCSCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHTSHHHHCCT
T ss_pred             CCCCCCCCcHHHHHHHhhcCccc--cCCccccCHHHHHHHHHHhccChhhCCCHHHHhhChHHhhCc
Confidence            99999888777666665554332  222346799999999999999999999999999999998764

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=100.00  E-value=8.8e-36  Score=292.69  Aligned_cols=191  Identities=25%  Similarity=0.355  Sum_probs=142.2

Q ss_pred             ceeEeeecCCCChHHHHHhhc-------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeec-CCCCCEEE
Q 014171           39 KLRRIRLCEGGELLDRILAKK-------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA-KEDSSLKA  110 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~-------~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~-~~~~~~kL  110 (429)
                      .|+|||||. |+|.+++....       ...+++..++.++.||+.||.|||++||+||||||+|||+... ...+.+||
T Consensus        95 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl  173 (405)
T 3rgf_A           95 VWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKI  173 (405)
T ss_dssp             EEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred             EEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEE
Confidence            468999997 58888885432       2249999999999999999999999999999999999999532 25689999


Q ss_pred             eecccceeccCC----CcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChh---------HH
Q 014171          111 TDFGLSDFIKPG----KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTED---------GI  175 (429)
Q Consensus       111 ~Dfg~a~~~~~~----~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~---------~~  175 (429)
                      +|||+|......    ......+||+.|+|||++.+  .++.++||||+||++|+|++|++||.+....         ..
T Consensus       174 ~Dfg~a~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~  253 (405)
T 3rgf_A          174 ADMGFARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQ  253 (405)
T ss_dssp             CCTTCCC----------------CCCTTCCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHH
T ss_pred             EECCCceecCCCCcccccCCCceecCcccCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHH
Confidence            999999876432    22345688999999999875  3688999999999999999999999766542         33


Q ss_pred             HHHHHhcCCCCCCCCCC----------------------------------CCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          176 FKEVLRNKPDFRRKPWP----------------------------------SISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       176 ~~~i~~~~~~~~~~~~~----------------------------------~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      +..+...........|+                                  ..++.+.+||.+||+.||.+|||++++|+
T Consensus       254 l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~  333 (405)
T 3rgf_A          254 LDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQ  333 (405)
T ss_dssp             HHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHHTTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred             HHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHhhcCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence            33333221111111121                                  12678999999999999999999999999


Q ss_pred             CCccccCCC
Q 014171          222 HPWVREGGD  230 (429)
Q Consensus       222 h~~~~~~~~  230 (429)
                      ||||++...
T Consensus       334 hp~f~~~~~  342 (405)
T 3rgf_A          334 DPYFLEDPL  342 (405)
T ss_dssp             SGGGTSSSC
T ss_pred             ChhhccCCC
Confidence            999997643

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=100.00  E-value=9.6e-37  Score=296.70  Aligned_cols=173  Identities=18%  Similarity=0.226  Sum_probs=141.5

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCC-------HHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEe
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYT-------EKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT  111 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~-------~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~  111 (429)
                      .|+||||| +|+|.+++...  +.++       +..+..++.||+.||.|||++||+||||||+|||++   .++.+||+
T Consensus       175 ~~lv~E~~-~g~L~~~l~~~--~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~---~~~~~kL~  248 (377)
T 3byv_A          175 RFFLYPRM-QSNLQTFGEVL--LSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLD---QRGGVFLT  248 (377)
T ss_dssp             EEEEEECC-SEEHHHHHHHH--HHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TTCCEEEC
T ss_pred             EEEEEecc-CCCHHHHHHhc--cccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEc---CCCCEEEE
Confidence            57999999 68999999765  2344       488888999999999999999999999999999999   57899999


Q ss_pred             ecccceeccCCCcccccccCCcccccccccC------------CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHH
Q 014171          112 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR------------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV  179 (429)
Q Consensus       112 Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~------------~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i  179 (429)
                      |||+|.....  ......| +.|+|||++.+            .++.++||||+||++|+|++|+.||.+.........+
T Consensus       249 DFG~a~~~~~--~~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~~  325 (377)
T 3byv_A          249 GFEHLVRDGA--RVVSSVS-RGFEPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWI  325 (377)
T ss_dssp             CGGGCEETTC--EEECCCC-TTCCCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSGGG
T ss_pred             echhheecCC--cccCCCC-cCccChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchhhh
Confidence            9999986432  3345677 99999999875            4788999999999999999999999765543333222


Q ss_pred             HhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          180 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      ..        .++.+++++.+||.+||+.||.+|||+.++++||||+..
T Consensus       326 ~~--------~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~  366 (377)
T 3byv_A          326 FR--------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL  366 (377)
T ss_dssp             GS--------SCCCCCHHHHHHHHHHTCSSGGGCCCHHHHHTSHHHHHH
T ss_pred             hh--------hccCCCHHHHHHHHHHcCCCchhCCCHHHHhhChHHHHH
Confidence            21        225689999999999999999999999999999999764

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=100.00  E-value=2.1e-35  Score=283.90  Aligned_cols=183  Identities=26%  Similarity=0.405  Sum_probs=155.7

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||. |+|.+++... ...+++..+..++.|++.||.|||++||+||||||+||+++   .++.+||+|||++
T Consensus       127 ~~~~lv~e~~~-g~l~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kL~DfG~a  201 (348)
T 1u5q_A          127 HTAWLVMEYCL-GSASDLLEVH-KKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS---EPGLVKLGDFGSA  201 (348)
T ss_dssp             TEEEEEEECCS-EEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEE---TTTEEEECCCTTC
T ss_pred             CeEEEEEecCC-CCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEC---CCCCEEEeeccCc
Confidence            34578999998 6888887654 36799999999999999999999999999999999999999   5789999999999


Q ss_pred             eeccCCCcccccccCCccccccccc----CCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCC
Q 014171          117 DFIKPGKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP  192 (429)
Q Consensus       117 ~~~~~~~~~~~~~g~~~y~aPE~~~----~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  192 (429)
                      ......   ....||+.|+|||++.    +.++.++||||+||++|+|++|+.||.+.+.......+.......  ....
T Consensus       202 ~~~~~~---~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~  276 (348)
T 1u5q_A          202 SIMAPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPA--LQSG  276 (348)
T ss_dssp             BSSSSB---CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCC--CCCT
T ss_pred             eecCCC---CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCCC--CCCC
Confidence            765432   3457999999999983    456889999999999999999999999888777776666654322  2234


Q ss_pred             CCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          193 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       193 ~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      .+++.+++||.+||+.||.+|||++++++||||....
T Consensus       277 ~~~~~l~~li~~~l~~dP~~Rps~~~ll~h~~~~~~~  313 (348)
T 1u5q_A          277 HWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER  313 (348)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCC
T ss_pred             CCCHHHHHHHHHHcccChhhCcCHHHHhhChhhhccC
Confidence            6799999999999999999999999999999998754

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=100.00  E-value=2.3e-35  Score=282.33  Aligned_cols=186  Identities=30%  Similarity=0.481  Sum_probs=161.6

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++...  ..+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++.
T Consensus       115 ~~~lv~e~~~~~~L~~~~~~~--~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~---~~~~~kl~Dfg~~~  189 (335)
T 2owb_A          115 FVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN---EDLEVKIGDFGLAT  189 (335)
T ss_dssp             EEEEEECCCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TTCCEEECCCTTCE
T ss_pred             eEEEEEecCCCCCHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEc---CCCCEEEeeccCce
Confidence            356899999999999988655  6799999999999999999999999999999999999998   57889999999998


Q ss_pred             eccCC-CcccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIKPG-KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~~~-~~~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      ..... .......|++.|+|||++.+. ++.++||||+|+++|+|++|+.||.+.........+......++    ..++
T Consensus       190 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~----~~~~  265 (335)
T 2owb_A          190 KVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP----KHIN  265 (335)
T ss_dssp             ECCSTTCCBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCCC----TTSC
T ss_pred             ecccCcccccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHhcCCCCCC----ccCC
Confidence            76532 233456789999999998754 58899999999999999999999998888887777777665443    3578


Q ss_pred             HHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCCC
Q 014171          196 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS  232 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~~  232 (429)
                      ..+.+||.+||+.||.+|||++++++||||+......
T Consensus       266 ~~~~~li~~~l~~dp~~Rps~~ell~~~~~~~~~~~~  302 (335)
T 2owb_A          266 PVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPA  302 (335)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCCCS
T ss_pred             HHHHHHHHHHccCChhHCcCHHHHhcCccccCCCccc
Confidence            9999999999999999999999999999999865443

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=100.00  E-value=3.3e-35  Score=275.87  Aligned_cols=186  Identities=30%  Similarity=0.481  Sum_probs=161.0

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++...  +.+++..+..++.|++.||.|||++||+||||||+||+++   .++.+||+|||.+.
T Consensus        89 ~~~lv~e~~~~~~L~~~~~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~dfg~~~  163 (294)
T 2rku_A           89 FVFVVLELCRRRSLLELHKRR--KALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLN---EDLEVKIGDFGLAT  163 (294)
T ss_dssp             EEEEEEECCTTCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCTTCE
T ss_pred             EEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEc---CCCCEEEEeccCce
Confidence            346899999999999988655  5799999999999999999999999999999999999998   57889999999998


Q ss_pred             eccCC-CcccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIKPG-KKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~~~-~~~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      ..... .......|++.|+|||++.+. ++.++|+||+|+++|+|++|+.||.+....+....+......++    ..++
T Consensus       164 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~----~~~~  239 (294)
T 2rku_A          164 KVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNEYSIP----KHIN  239 (294)
T ss_dssp             ECCSTTCCBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTTCCCCC----TTSC
T ss_pred             ecccCccccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhhccCCCc----cccC
Confidence            76532 233456789999999998754 58899999999999999999999998888877777776654433    3578


Q ss_pred             HHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCCC
Q 014171          196 NSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS  232 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~~  232 (429)
                      ..+.++|.+||+.||.+|||++++++||||+....+.
T Consensus       240 ~~~~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~~~~  276 (294)
T 2rku_A          240 PVAASLIQKMLQTDPTARPTINELLNDEFFTSGYIPA  276 (294)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHTSCCCS
T ss_pred             HHHHHHHHHHcccChhhCcCHHHHhhChheecCCcCC
Confidence            9999999999999999999999999999998765443

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=100.00  E-value=4.3e-35  Score=275.94  Aligned_cols=191  Identities=29%  Similarity=0.469  Sum_probs=151.6

Q ss_pred             ccceeEeeecCCCChHHHHHhh------cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEE
Q 014171           37 LRKLRRIRLCEGGELLDRILAK------KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKA  110 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~------~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL  110 (429)
                      ...|+|||||.||+|.+++...      ..+.+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||
T Consensus        86 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl  162 (303)
T 2vwi_A           86 DELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLG---EDGSVQI  162 (303)
T ss_dssp             SCEEEEEECCTTCBHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEC---TTCCEEE
T ss_pred             CCcEEEehhccCCchHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEc---CCCCEEE
Confidence            3457899999999999998642      245699999999999999999999999999999999999998   5789999


Q ss_pred             eecccceeccCCC------cccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhc
Q 014171          111 TDFGLSDFIKPGK------KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN  182 (429)
Q Consensus       111 ~Dfg~a~~~~~~~------~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~  182 (429)
                      +|||.+.......      ......|++.|+|||++.+  .++.++||||+|+++|+|++|+.||.+.............
T Consensus       163 ~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~  242 (303)
T 2vwi_A          163 ADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQN  242 (303)
T ss_dssp             CCCHHHHHCC---------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHTS
T ss_pred             EeccchheeccCCCccchhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhHHHHHhcc
Confidence            9999987654321      1234578999999999864  5689999999999999999999999888777666655544


Q ss_pred             CCCCC------CCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          183 KPDFR------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       183 ~~~~~------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                      .....      ......++..+.++|.+||+.||.+|||+.++++||||+....
T Consensus       243 ~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~~  296 (303)
T 2vwi_A          243 DPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQKAKN  296 (303)
T ss_dssp             SCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHTSTTC-----
T ss_pred             CCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhhChhhhcCCC
Confidence            33211      1223567899999999999999999999999999999987643

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=100.00  E-value=4.3e-36  Score=296.81  Aligned_cols=188  Identities=27%  Similarity=0.351  Sum_probs=152.2

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCC--EEEeecc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSS--LKATDFG  114 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~--~kL~Dfg  114 (429)
                      ...|+|||||. |+|.+++.......+++..++.++.||+.||.|||++||+||||||+|||++.   ++.  +||+|||
T Consensus       172 ~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~---~~~~~vkL~DFG  247 (429)
T 3kvw_A          172 NHICMTFELLS-MNLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQ---QGRSGIKVIDFG  247 (429)
T ss_dssp             TEEEEEECCCC-CBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESS---TTSCCEEECCCT
T ss_pred             CeEEEEEeccC-CCHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcc---CCCcceEEeecc
Confidence            34578999996 69999998776667999999999999999999999999999999999999984   444  9999999


Q ss_pred             cceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCC-----
Q 014171          115 LSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR-----  188 (429)
Q Consensus       115 ~a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~-----  188 (429)
                      +|.....  .....+||+.|+|||++.+ .++.++||||+||++|+|++|.+||.+.+....+..+.......+.     
T Consensus       248 ~a~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~~~~~~  325 (429)
T 3kvw_A          248 SSCYEHQ--RVYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQKLLDA  325 (429)
T ss_dssp             TCEETTC--CCCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHT
T ss_pred             cceecCC--cccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHh
Confidence            9976543  2345688999999999865 5699999999999999999999999998887766655432100000     


Q ss_pred             ------------------------------------------C--------CCCCCCHHHHHHHHHhccCCccCcCCHHH
Q 014171          189 ------------------------------------------K--------PWPSISNSAKDFVKKLLVKDPRARLTAAQ  218 (429)
Q Consensus       189 ------------------------------------------~--------~~~~~~~~~~~li~~~l~~dp~~R~s~~e  218 (429)
                                                                +        .....++.+.+||.+||+.||.+|||++|
T Consensus       326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~dli~~~L~~dP~~Rpta~e  405 (429)
T 3kvw_A          326 SKRAKNFVSSKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQ  405 (429)
T ss_dssp             BTTHHHHBCTTSCBTTSCEECCCC--CEECCEECTTCCEECSTTCSCHHHHTTTCCCHHHHHHHHHHTCSSTTTSCCHHH
T ss_pred             hhhhhhccCCCCCcccccccccccccccccccccchhhccCCccchhhHhhccccchHHHHHHHHHHCCCChhhCCCHHH
Confidence                                                      0        00123788999999999999999999999


Q ss_pred             HhCCCccccCCC
Q 014171          219 ALSHPWVREGGD  230 (429)
Q Consensus       219 ~l~h~~~~~~~~  230 (429)
                      +|+||||+....
T Consensus       406 ~L~Hpw~~~~~~  417 (429)
T 3kvw_A          406 ALRHPWLRRRLP  417 (429)
T ss_dssp             HHTSTTTC----
T ss_pred             HhCChhhccCCC
Confidence            999999998643

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=100.00  E-value=1.7e-35  Score=288.96  Aligned_cols=183  Identities=28%  Similarity=0.517  Sum_probs=149.4

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+||| |.+|+|.+++...  ..+++..+..++.||+.||.|||++||+||||||+|||++    ++.+||+|||++.
T Consensus       130 ~~~lv~E-~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~----~~~~kl~DFG~a~  202 (390)
T 2zmd_A          130 YIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIAN  202 (390)
T ss_dssp             EEEEEEE-CCSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES----SSCEEECCCSSSC
T ss_pred             EEEEEEe-cCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE----CCeEEEEecCccc
Confidence            3578999 6789999999654  5899999999999999999999999999999999999996    4789999999998


Q ss_pred             eccCCC---cccccccCCcccccccccC------------CCCCCcchHHHHHHHHHHhhCCCCCCCCChh-HHHHHHHh
Q 014171          118 FIKPGK---KFQDIVGSAYYVAPEVLKR------------KSGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLR  181 (429)
Q Consensus       118 ~~~~~~---~~~~~~g~~~y~aPE~~~~------------~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~~  181 (429)
                      ......   .....+||+.|+|||++.+            .++.++||||+||++|+|++|+.||.+.... .....+..
T Consensus       203 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~  282 (390)
T 2zmd_A          203 QMQPDTTSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID  282 (390)
T ss_dssp             CC---------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHC
T ss_pred             cccCCCccccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhhHHHHHHHHHhC
Confidence            765332   2245679999999999864            4678899999999999999999999876433 44555555


Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          182 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      .......+  ...+.++.+||.+||+.||.+|||+.++++||||+...
T Consensus       283 ~~~~~~~~--~~~~~~~~~li~~~L~~dP~~Rps~~ell~hp~~~~~~  328 (390)
T 2zmd_A          283 PNHEIEFP--DIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  328 (390)
T ss_dssp             TTSCCCCC--CCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred             ccccCCCC--ccchHHHHHHHHHHcccChhhCCCHHHHhhCcCccccC
Confidence            44333322  34578999999999999999999999999999998654

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=100.00  E-value=6.6e-36  Score=290.16  Aligned_cols=208  Identities=25%  Similarity=0.382  Sum_probs=151.2

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG   86 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~   86 (429)
                      +.++|+|++.+++++.........      ...|+|||||. |+|.+.+.    ..+++..+..++.||+.||.|||++|
T Consensus        79 ~~l~hpniv~~~~~~~~~~~~~~~------~~~~lv~e~~~-~~l~~~~~----~~~~~~~~~~i~~qi~~al~~lH~~~  147 (371)
T 2xrw_A           79 KCVNHKNIIGLLNVFTPQKSLEEF------QDVYIVMELMD-ANLCQVIQ----MELDHERMSYLLYQMLCGIKHLHSAG  147 (371)
T ss_dssp             HHCCCTTBCCEEEEECSCCSTTTC------CEEEEEEECCS-EEHHHHHH----SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HhcCCCCccceEEeeccccccccc------cceEEEEEcCC-CCHHHHHh----hccCHHHHHHHHHHHHHHHHHHHHCC
Confidence            345566666666655432211111      13468999998 57888773    35999999999999999999999999


Q ss_pred             CeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCC
Q 014171           87 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRR  165 (429)
Q Consensus        87 i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~  165 (429)
                      |+||||||+||+++   .++.+||+|||++.............||+.|+|||++.+ .++.++||||+||++|+|++|+.
T Consensus       148 ivH~Dlkp~NIl~~---~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~  224 (371)
T 2xrw_A          148 IIHRDLKPSNIVVK---SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV  224 (371)
T ss_dssp             CCCSCCCGGGEEEC---TTSCEEECCCCC----------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSC
T ss_pred             eecccCCHHHEEEc---CCCCEEEEEeecccccccccccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCC
Confidence            99999999999998   578999999999987765544556789999999999875 46899999999999999999999


Q ss_pred             CCCCCChhHHHHHHHhcCCCCC----------------------CCC---------CCC-------CCHHHHHHHHHhcc
Q 014171          166 PFWDKTEDGIFKEVLRNKPDFR----------------------RKP---------WPS-------ISNSAKDFVKKLLV  207 (429)
Q Consensus       166 pf~~~~~~~~~~~i~~~~~~~~----------------------~~~---------~~~-------~~~~~~~li~~~l~  207 (429)
                      ||.+.+....+..+........                      ...         ++.       .+.++++||.+||+
T Consensus       225 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~  304 (371)
T 2xrw_A          225 LFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLV  304 (371)
T ss_dssp             SSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCc
Confidence            9999888777766654322110                      000         000       14678999999999


Q ss_pred             CCccCcCCHHHHhCCCccccC
Q 014171          208 KDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       208 ~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      .||.+|||++++++||||+..
T Consensus       305 ~dP~~R~t~~e~l~hp~~~~~  325 (371)
T 2xrw_A          305 IDASKRISVDEALQHPYINVW  325 (371)
T ss_dssp             SSGGGSCCHHHHHHSHHHHTT
T ss_pred             CChhhCCCHHHHhCCcchhhh
Confidence            999999999999999999754

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=1.3e-35  Score=286.25  Aligned_cols=183  Identities=30%  Similarity=0.551  Sum_probs=152.9

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||.||+|.+++...  ..+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++
T Consensus       132 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kl~DfG~a  206 (355)
T 1vzo_A          132 TKLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLD---SNGHVVLTDFGLS  206 (355)
T ss_dssp             TEEEEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEESCSSEE
T ss_pred             ceEEEEeecCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCcEEEeeCCCC
Confidence            3467899999999999999765  5799999999999999999999999999999999999998   5789999999999


Q ss_pred             eeccCCC--cccccccCCcccccccccC---CCCCCcchHHHHHHHHHHhhCCCCCCCCCh----hHHHHHHHhcCCCCC
Q 014171          117 DFIKPGK--KFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTE----DGIFKEVLRNKPDFR  187 (429)
Q Consensus       117 ~~~~~~~--~~~~~~g~~~y~aPE~~~~---~~~~~~DiwslG~il~~l~~g~~pf~~~~~----~~~~~~i~~~~~~~~  187 (429)
                      +......  ......||+.|+|||++.+   .++.++||||+||++|+|++|+.||.....    ......+....+.++
T Consensus       207 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  286 (355)
T 1vzo_A          207 KEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYP  286 (355)
T ss_dssp             EECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCCC
T ss_pred             eecccCCCCcccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccCCccchHHHHHHHHhccCCCCC
Confidence            8654322  2334579999999999974   347899999999999999999999975432    334444444443332


Q ss_pred             CCCCCCCCHHHHHHHHHhccCCccCcC-----CHHHHhCCCccccC
Q 014171          188 RKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG  228 (429)
Q Consensus       188 ~~~~~~~~~~~~~li~~~l~~dp~~R~-----s~~e~l~h~~~~~~  228 (429)
                          +.++..+++||.+||..||.+||     +++++++||||+..
T Consensus       287 ----~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~~f~~~  328 (355)
T 1vzo_A          287 ----QEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI  328 (355)
T ss_dssp             ----TTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred             ----cccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCcchhcC
Confidence                46899999999999999999999     99999999999864

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=100.00  E-value=2.4e-35  Score=294.27  Aligned_cols=210  Identities=24%  Similarity=0.364  Sum_probs=152.1

Q ss_pred             ccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 014171            8 DTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGL   87 (429)
Q Consensus         8 ~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i   87 (429)
                      .++|+|++.+++++.......       ....|+|||||. |+|.+++..  ...+++..++.++.||+.||.|||++||
T Consensus       108 ~l~h~niv~l~~~~~~~~~~~-------~~~~~lv~e~~~-~~L~~~~~~--~~~l~~~~~~~~~~qi~~aL~~LH~~~i  177 (458)
T 3rp9_A          108 RLNHDHVVKVLDIVIPKDVEK-------FDELYVVLEIAD-SDFKKLFRT--PVYLTELHIKTLLYNLLVGVKYVHSAGI  177 (458)
T ss_dssp             HCCCTTBCCEEEECCCSCTTT-------CCCEEEEECCCS-EEHHHHHHS--SCCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             hCCCCCCCceEEEEecCCccc-------CceEEEEEeccc-cchhhhccc--CCCCCHHHHHHHHHHHHHHHHHHHhCCc
Confidence            445666666666543211000       122468999985 799998854  3679999999999999999999999999


Q ss_pred             eecCCCCCcEEEeecCCCCCEEEeecccceeccCCC----------------------------cccccccCCccccccc
Q 014171           88 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK----------------------------KFQDIVGSAYYVAPEV  139 (429)
Q Consensus        88 ~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~----------------------------~~~~~~g~~~y~aPE~  139 (429)
                      +||||||+|||++   .++.+||+|||+|+......                            .....+||+.|+|||+
T Consensus       178 iHrDlKp~NILl~---~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~  254 (458)
T 3rp9_A          178 LHRDLKPANCLVN---QDCSVKVCDFGLARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPEL  254 (458)
T ss_dssp             BCCCCCGGGEEEC---TTCCEEECCCTTCBCTTSCTTCCCCCC---------------------------CCCTTCCHHH
T ss_pred             CCCCCChhhEEEC---CCCCEeecccccchhccCccccccccccCccccccccccccccccccccccCCcccccccChHH
Confidence            9999999999998   57899999999998764221                            2234578999999997


Q ss_pred             cc--CCCCCCcchHHHHHHHHHHhh-----------CCCCCCCCCh--------------------hHHHHHHHh-----
Q 014171          140 LK--RKSGPESDVWSIGVITYILLC-----------GRRPFWDKTE--------------------DGIFKEVLR-----  181 (429)
Q Consensus       140 ~~--~~~~~~~DiwslG~il~~l~~-----------g~~pf~~~~~--------------------~~~~~~i~~-----  181 (429)
                      +.  ..++.++||||+||++|+|++           |++||.+.+.                    ...+..+..     
T Consensus       255 ~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p  334 (458)
T 3rp9_A          255 ILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTP  334 (458)
T ss_dssp             HTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--------------------CHHHHHHHHHHHHHHCCC
T ss_pred             hhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCCccccccccccccccccccccCCHHHHHHHHHHcCCC
Confidence            63  457999999999999999999           6777766431                    111111111     


Q ss_pred             ------------------cCCCCC----CCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          182 ------------------NKPDFR----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       182 ------------------~~~~~~----~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                                        ..+...    ...++..++++.+||.+||..||.+|||++|+|+||||+....
T Consensus       335 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t~~e~L~Hp~f~~~~~  405 (458)
T 3rp9_A          335 SEEDIEALEKEDAKRYIRIFPKREGTDLAERFPASSADAIHLLKRMLVFNPNKRITINECLAHPFFKEVRI  405 (458)
T ss_dssp             CHHHHHTSSCHHHHHHHTTSCCCCCCCGGGGSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHSGGGTTTCC
T ss_pred             CHHHHhhcCCHHHHHHHHhcCCCCCCCHHHHCCCCCHHHHHHHHHHhccCccccCCHHHHhcCHhhhhcCC
Confidence                              000000    1124567999999999999999999999999999999998643

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=100.00  E-value=3.7e-35  Score=279.54  Aligned_cols=189  Identities=25%  Similarity=0.344  Sum_probs=159.5

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..++||||+. |+|.+++.......+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||.+.
T Consensus        93 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~---~~~~~kl~Dfg~~~  168 (326)
T 1blx_A           93 KLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT---SSGQIKLADFGLAR  168 (326)
T ss_dssp             EEEEEEECCS-CBHHHHHHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTCCEEECSCCSCC
T ss_pred             eEEEEEecCC-CCHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEc---CCCCEEEecCcccc
Confidence            3468999998 6999999776666799999999999999999999999999999999999998   57899999999998


Q ss_pred             eccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCC----------
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF----------  186 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~----------  186 (429)
                      ............|++.|+|||++.+ .++.++||||+||++|+|++|+.||.+.........+.......          
T Consensus       169 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  248 (326)
T 1blx_A          169 IYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVA  248 (326)
T ss_dssp             CCCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCS
T ss_pred             cccCCCCccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCccccc
Confidence            7654444456678999999999864 46889999999999999999999999988877776665421100          


Q ss_pred             -------------CCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          187 -------------RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       187 -------------~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                                   ....++.++..+++||.+||+.||.+|||+.++++||||+....
T Consensus       249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~~~~  305 (326)
T 1blx_A          249 LPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER  305 (326)
T ss_dssp             SCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred             cchhhhcccCcchhhhccccCCHHHHHHHHHHcCCCcccCCCHHHHhcCccccccch
Confidence                         00123467899999999999999999999999999999987643

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=100.00  E-value=1.7e-35  Score=283.26  Aligned_cols=177  Identities=31%  Similarity=0.496  Sum_probs=150.2

Q ss_pred             cceeEeeecCCC-ChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           38 RKLRRIRLCEGG-ELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        38 ~~~lv~e~~~gg-~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ..|+|||||.+| +|.+++...  ..+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++
T Consensus       103 ~~~lv~e~~~~g~~l~~~~~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~---~~~~~kL~Dfg~a  177 (335)
T 3dls_A          103 FFQLVMEKHGSGLDLFAFIDRH--PRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIA---EDFTIKLIDFGSA  177 (335)
T ss_dssp             EEEEEEECCTTSCBHHHHHHTC--CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTSCEEECCCTTC
T ss_pred             EEEEEEEeCCCCccHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEc---CCCcEEEeecccc
Confidence            346899999777 999988544  6799999999999999999999999999999999999998   5789999999999


Q ss_pred             eeccCCCcccccccCCcccccccccCC-C-CCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DFIKPGKKFQDIVGSAYYVAPEVLKRK-S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~~~~~~~~~~~~g~~~y~aPE~~~~~-~-~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      .............||+.|+|||++.+. + +.++||||+||++|+|++|..||......      ...    .......+
T Consensus       178 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~------~~~----~~~~~~~~  247 (335)
T 3dls_A          178 AYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEET------VEA----AIHPPYLV  247 (335)
T ss_dssp             EECCTTCCBCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSCSSGGGG------TTT----CCCCSSCC
T ss_pred             eECCCCCceeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHhCCCchhhHHHH------Hhh----ccCCCccc
Confidence            888766666677899999999998754 3 67899999999999999999999653221      111    11222357


Q ss_pred             CHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      ++++.+||.+||+.||.+|||++++++||||+...
T Consensus       248 ~~~l~~li~~~L~~dP~~Rps~~ell~hp~~~~~~  282 (335)
T 3dls_A          248 SKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQPV  282 (335)
T ss_dssp             CHHHHHHHHHHTCSSGGGSCCHHHHHHCTTTTCCC
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhcCccccCCc
Confidence            99999999999999999999999999999998754

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=100.00  E-value=1.1e-35  Score=287.97  Aligned_cols=184  Identities=30%  Similarity=0.458  Sum_probs=140.4

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|+||+ +++|.+++..   ..+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||+++
T Consensus       108 ~~~lv~e~~-~~~L~~~~~~---~~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~---~~~~~kL~DFG~a~  180 (367)
T 2fst_X          108 DVYLVTHLM-GADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLAR  180 (367)
T ss_dssp             CCEEEEECC-CEECC--------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTCCEEECC-----
T ss_pred             eEEEEeccc-CCCHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEEC---CCCCEEEeeccccc
Confidence            357899999 7899988843   5799999999999999999999999999999999999998   57899999999998


Q ss_pred             eccCCCcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcC------------
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK------------  183 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~------------  183 (429)
                      .....  .....||+.|+|||++.+  .++.++||||+||++|+|++|+.||.+.+....+..+....            
T Consensus       181 ~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~  258 (367)
T 2fst_X          181 HTADE--MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKIS  258 (367)
T ss_dssp             ------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHTTCC
T ss_pred             ccccc--CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHhh
Confidence            65432  345678999999999865  56899999999999999999999999888776666554321            


Q ss_pred             -----------CCCCCC----CCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          184 -----------PDFRRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       184 -----------~~~~~~----~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                                 ...+..    .++..++.+.+||.+||+.||.+|||+.++|+||||+....
T Consensus       259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~~e~L~hp~~~~~~~  320 (367)
T 2fst_X          259 SESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAHAYFAQYHD  320 (367)
T ss_dssp             CHHHHHHHHTSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred             hHHHHHHHhccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCHHHHhcChhhhhccC
Confidence                       111111    12456889999999999999999999999999999997644

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=100.00  E-value=6.7e-35  Score=288.69  Aligned_cols=210  Identities=25%  Similarity=0.374  Sum_probs=152.0

Q ss_pred             ccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 014171            8 DTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGL   87 (429)
Q Consensus         8 ~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i   87 (429)
                      .++|+|++.+++++......       .....|+|||||. |+|.+++..  ...+++..++.++.||+.||.|||++||
T Consensus        81 ~l~h~nIv~l~~~~~~~~~~-------~~~~~~lv~e~~~-~~L~~~~~~--~~~l~~~~~~~i~~qil~aL~~LH~~gi  150 (432)
T 3n9x_A           81 RLKSDYIIRLYDLIIPDDLL-------KFDELYIVLEIAD-SDLKKLFKT--PIFLTEEHIKTILYNLLLGENFIHESGI  150 (432)
T ss_dssp             HCCCTTBCCEEEECCCSCTT-------TCCCEEEEEECCS-EEHHHHHHS--SCCCCHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred             HcCCCCcceEEEEEecCCCC-------cCCeEEEEEecCC-cCHHHHHhc--cCCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            44566665555544331100       0123478999997 699998854  3679999999999999999999999999


Q ss_pred             eecCCCCCcEEEeecCCCCCEEEeecccceeccCCC-----------------------cccccccCCccccccccc--C
Q 014171           88 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-----------------------KFQDIVGSAYYVAPEVLK--R  142 (429)
Q Consensus        88 ~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~-----------------------~~~~~~g~~~y~aPE~~~--~  142 (429)
                      +||||||+|||++   .++.+||+|||+|+......                       .....+||+.|+|||++.  .
T Consensus       151 vHrDlkp~NILl~---~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~  227 (432)
T 3n9x_A          151 IHRDLKPANCLLN---QDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRWYRAPELILLQE  227 (432)
T ss_dssp             ECCCCCGGGEEEC---TTCCEEECCCTTCEEC-------------------------------CCCCCTTCCHHHHTTCS
T ss_pred             CCCCCCHHHeEEC---CCCCEEEccCCCcccccccccccccccccccccccccccchhccccCCCCCccccCHHHHhcCC
Confidence            9999999999998   57899999999998764332                       125668999999999863  4


Q ss_pred             CCCCCcchHHHHHHHHHHhhC-----------CCCCCCCCh-----------------hHHHHHH---------------
Q 014171          143 KSGPESDVWSIGVITYILLCG-----------RRPFWDKTE-----------------DGIFKEV---------------  179 (429)
Q Consensus       143 ~~~~~~DiwslG~il~~l~~g-----------~~pf~~~~~-----------------~~~~~~i---------------  179 (429)
                      .++.++||||+||++|+|++|           .++|.+.+.                 ...+..+               
T Consensus       228 ~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~~~~~~  307 (432)
T 3n9x_A          228 NYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTEDDLKNI  307 (432)
T ss_dssp             CCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC----------CHHHHHHHHHHHHHHHCSCCHHHHHTC
T ss_pred             CCCcccccchHHHHHHHHHhcccccccccccccccCCCccccccCcccccccccccchHHHHHHHHHhcCCCCHHHHHhc
Confidence            578999999999999999984           444444321                 1111111               


Q ss_pred             --------HhcCCCCCCC----CCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          180 --------LRNKPDFRRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       180 --------~~~~~~~~~~----~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                              ....+.....    .++.+++++.+||.+||+.||.+|||++++|+||||+....
T Consensus       308 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e~L~Hp~f~~~~~  370 (432)
T 3n9x_A          308 NKPEVIKYIKLFPHRKPINLKQKYPSISDDGINLLESMLKFNPNKRITIDQALDHPYLKDVRK  370 (432)
T ss_dssp             CCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTCGGGTTTCC
T ss_pred             cCHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHhcCCcccCCCHHHHhcChhhhhccC
Confidence                    1111111111    12568999999999999999999999999999999998654

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=100.00  E-value=4.8e-35  Score=282.70  Aligned_cols=217  Identities=23%  Similarity=0.288  Sum_probs=166.4

Q ss_pred             ccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHH--
Q 014171            8 DTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECH--   83 (429)
Q Consensus         8 ~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~l~~~~~~~i~~qil~aL~~lH--   83 (429)
                      .++|+|++.+.+++...........     ..++|||||.+ +|...+..  .....+++..+..++.|++.||.|||  
T Consensus        75 ~l~h~niv~~~~~~~~~~~~~~~~~-----~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~  148 (360)
T 3e3p_A           75 VLHHPNIVQLQSYFYTLGERDRRDI-----YLNVVMEYVPD-TLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIGCLHLP  148 (360)
T ss_dssp             HHCCTTBCCEEEEEEEECSSCTTCE-----EEEEEEECCSC-BHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHTST
T ss_pred             hcCCCCcccHHHhhhccccccccce-----eEEEEeecccc-cHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhCC
Confidence            3466666666665543222111111     13579999986 55555533  24467999999999999999999999  


Q ss_pred             HCCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHh
Q 014171           84 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILL  161 (429)
Q Consensus        84 ~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~  161 (429)
                      ++||+||||||+||+++.  .++.+||+|||++.............||+.|+|||++.+  .++.++||||+||++|+|+
T Consensus       149 ~~~ivH~Dlkp~NIll~~--~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell  226 (360)
T 3e3p_A          149 SVNVCHRDIKPHNVLVNE--ADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMM  226 (360)
T ss_dssp             TTCCBCSCCCGGGEEEET--TTTEEEECCCTTCBCCCTTSCCCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHH
T ss_pred             CCCeecCcCCHHHEEEeC--CCCcEEEeeCCCceecCCCCCcccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHH
Confidence            999999999999999983  367999999999988776666566789999999999854  3689999999999999999


Q ss_pred             hCCCCCCCCChhHHHHHHHhcCCCCC----------------------------CCCCCCCCHHHHHHHHHhccCCccCc
Q 014171          162 CGRRPFWDKTEDGIFKEVLRNKPDFR----------------------------RKPWPSISNSAKDFVKKLLVKDPRAR  213 (429)
Q Consensus       162 ~g~~pf~~~~~~~~~~~i~~~~~~~~----------------------------~~~~~~~~~~~~~li~~~l~~dp~~R  213 (429)
                      +|+.||.+.+.......+.......+                            .......++++.+||.+||+.||.+|
T Consensus       227 ~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R  306 (360)
T 3e3p_A          227 LGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSALLQYLPEER  306 (360)
T ss_dssp             HSSCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHHTCSSGGGS
T ss_pred             hCCCCcCCCChHHHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHHhccCcccc
Confidence            99999999888777766654211100                            00112256789999999999999999


Q ss_pred             CCHHHHhCCCccccCCCCC
Q 014171          214 LTAAQALSHPWVREGGDAS  232 (429)
Q Consensus       214 ~s~~e~l~h~~~~~~~~~~  232 (429)
                      ||+.++++||||++.....
T Consensus       307 pt~~e~l~hp~f~~~~~~~  325 (360)
T 3e3p_A          307 MKPYEALCHPYFDELHDPA  325 (360)
T ss_dssp             CCHHHHTTSGGGGGGGCTT
T ss_pred             CCHHHHhcCccccccCCcc
Confidence            9999999999999865433

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=100.00  E-value=6.8e-36  Score=287.32  Aligned_cols=187  Identities=23%  Similarity=0.430  Sum_probs=157.7

Q ss_pred             cceeEeeecCCCChHHH------HHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEeecCCCCCEEE
Q 014171           38 RKLRRIRLCEGGELLDR------ILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKA  110 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~------l~~~~~~~l~~~~~~~i~~qil~aL~~lH~-~~i~H~dikp~Nil~~~~~~~~~~kL  110 (429)
                      ..|+|||||+||+|.++      +.......+++..+..++.||+.||.|||+ +||+||||||+||+++   .++.+||
T Consensus       117 ~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~---~~~~~kl  193 (348)
T 2pml_X          117 EVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMD---KNGRVKL  193 (348)
T ss_dssp             EEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEEC---TTSCEEE
T ss_pred             eEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEc---CCCcEEE
Confidence            45789999999999998      644335789999999999999999999999 9999999999999998   5789999


Q ss_pred             eecccceeccCCCcccccccCCcccccccccCC--CCC-CcchHHHHHHHHHHhhCCCCCCCCCh-hHHHHHHHhcCCCC
Q 014171          111 TDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK--SGP-ESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEVLRNKPDF  186 (429)
Q Consensus       111 ~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~~--~~~-~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~i~~~~~~~  186 (429)
                      +|||.+...... ......|++.|+|||++.+.  ++. ++||||+||++|+|++|..||.+... ......+......+
T Consensus       194 ~dfg~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~i~~~~~~~  272 (348)
T 2pml_X          194 SDFGESEYMVDK-KIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKISLVELFNNIRTKNIEY  272 (348)
T ss_dssp             CCCTTCEECBTT-EECSSCSCGGGCCGGGGSSCCCEEHHHHHHHHHHHHHHHHHHSSCSSCCSSCSHHHHHHHTSCCCCC
T ss_pred             eccccccccccc-cccCCCCCcCccCchhhcCCCCCCcchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHhccCcCC
Confidence            999999876543 33556789999999999765  344 89999999999999999999988776 66666666665544


Q ss_pred             CCCC---------------CCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          187 RRKP---------------WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       187 ~~~~---------------~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      +...               .+.++..+.+||.+||+.||.+|||++++++||||+..
T Consensus       273 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~e~l~hp~f~~~  329 (348)
T 2pml_X          273 PLDRNHFLYPLTNKKSTCSNNFLSNEDIDFLKLFLRKNPAERITSEDALKHEWLADT  329 (348)
T ss_dssp             CCSSSSSTTTTCC--------CCCHHHHHHHHHHCCSSGGGSCCHHHHHTSGGGTTC
T ss_pred             ccchhhhhccccccccccchhhcCHHHHHHHHHHccCChhhCCCHHHHhcCccccCC
Confidence            4210               14688999999999999999999999999999999875

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=100.00  E-value=3.2e-35  Score=274.60  Aligned_cols=183  Identities=21%  Similarity=0.280  Sum_probs=147.0

Q ss_pred             ccceeEeeecCCCChHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecC-----------
Q 014171           37 LRKLRRIRLCEGGELLDRILAKK--DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK-----------  103 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~-----------  103 (429)
                      ...|+|||||+||+|.+++....  ...+++..+..++.||+.||.|||++||+||||||+||+++..+           
T Consensus        84 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~  163 (289)
T 1x8b_A           84 DHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDE  163 (289)
T ss_dssp             TEEEEEEECCTTCBHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------
T ss_pred             CeEEEEEEecCCCcHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCccccccccc
Confidence            34578999999999999996642  26799999999999999999999999999999999999998432           


Q ss_pred             -----CCCCEEEeecccceeccCCCcccccccCCcccccccccCCC--CCCcchHHHHHHHHHHhhCCCCCCCCChhHHH
Q 014171          104 -----EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDGIF  176 (429)
Q Consensus       104 -----~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~  176 (429)
                           ....+||+|||.+.......   ...|++.|+|||++.+..  +.++||||+||++|+|++|.+|+....   ..
T Consensus       164 ~~~~~~~~~~kl~Dfg~~~~~~~~~---~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~---~~  237 (289)
T 1x8b_A          164 DDWASNKVMFKIGDLGHVTRISSPQ---VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGD---QW  237 (289)
T ss_dssp             ------CCCEEECCCTTCEETTCSC---CCCCCGGGCCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSSSH---HH
T ss_pred             ccccCCceEEEEcccccccccCCcc---ccCCCccccChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcchh---HH
Confidence                 34579999999998765432   346899999999997643  568999999999999999998775432   33


Q ss_pred             HHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          177 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       177 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      ..+..+..   +...+.+++.+.++|.+||+.||.+|||+.++++||||+..
T Consensus       238 ~~~~~~~~---~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  286 (289)
T 1x8b_A          238 HEIRQGRL---PRIPQVLSQEFTELLKVMIHPDPERRPSAMALVKHSVLLSA  286 (289)
T ss_dssp             HHHHTTCC---CCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHTCTTC---
T ss_pred             HHHHcCCC---CCCCcccCHHHHHHHHHHhCCCcccCCCHHHHhhChHhhhh
Confidence            44444432   12234689999999999999999999999999999999875

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=100.00  E-value=2.9e-35  Score=275.52  Aligned_cols=204  Identities=21%  Similarity=0.285  Sum_probs=149.9

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHh--hcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILA--KKDSRYTEKDAAVVVRQMLRVAAECHL   84 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~--~~~~~l~~~~~~~i~~qil~aL~~lH~   84 (429)
                      ...+|+|++.+.+.+..            ....|+|||||. |+|.+++..  ..+..+++..+..++.|++.||.|||+
T Consensus        61 ~~~~h~~iv~~~~~~~~------------~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~  127 (290)
T 3fme_A           61 RTVDCPFTVTFYGALFR------------EGDVWICMELMD-TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS  127 (290)
T ss_dssp             TTCCCTTBCCEEEEEEC------------SSSEEEEEECCS-EEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhCCCCeEEEEeeeeec------------cCCEEEEEehhc-cchHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence            34455555555554332            234578999998 588887754  244689999999999999999999999


Q ss_pred             C-CCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCccccccccc-----CCCCCCcchHHHHHHHH
Q 014171           85 H-GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-----RKSGPESDVWSIGVITY  158 (429)
Q Consensus        85 ~-~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~DiwslG~il~  158 (429)
                      + ||+||||||+||+++   .++.+||+|||++.............||+.|+|||++.     ..++.++||||+||++|
T Consensus       128 ~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~  204 (290)
T 3fme_A          128 KLSVIHRDVKPSNVLIN---ALGQVKMCDFGISGYLVDDVAKDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMI  204 (290)
T ss_dssp             HSCCCCCCCSGGGCEEC---TTCCEEBCCC---------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHH
T ss_pred             cCCeecCCCCHHHEEEC---CCCCEEEeecCCcccccccccccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHH
Confidence            8 999999999999998   57899999999998776555555568999999999963     34578999999999999


Q ss_pred             HHhhCCCCCCCC-ChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          159 ILLCGRRPFWDK-TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       159 ~l~~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      +|++|+.||... ...............  ......+++++.++|.+||+.||.+|||+.++++||||+..
T Consensus       205 ~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~hp~f~~~  273 (290)
T 3fme_A          205 ELAILRFPYDSWGTPFQQLKQVVEEPSP--QLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLH  273 (290)
T ss_dssp             HHHHTSCSSCCCSCHHHHHHHHHHSCCC--CCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             HHHHCCCCccccCchHHHHHHHhccCCC--CcccccCCHHHHHHHHHHhhcChhhCcCHHHHHhCcccccC
Confidence            999999999763 333344444433322  22234689999999999999999999999999999999864

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=100.00  E-value=3.4e-35  Score=272.99  Aligned_cols=186  Identities=32%  Similarity=0.570  Sum_probs=153.2

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||+||+|.+++.  ....+++..+..++.|++.||.|||++||+||||||+||+++   .++.+||+|||.+.
T Consensus        79 ~~~lv~e~~~~~~L~~~l~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~dfg~~~  153 (276)
T 2yex_A           79 IQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLAT  153 (276)
T ss_dssp             EEEEEEECCTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCCTTCE
T ss_pred             EEEEEEEecCCCcHHHHHh--hccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEc---cCCCEEEeeCCCcc
Confidence            4578999999999999884  336799999999999999999999999999999999999998   57889999999997


Q ss_pred             eccCCC---cccccccCCcccccccccCCC--CCCcchHHHHHHHHHHhhCCCCCCCCChhH-HHHHHHhcCCCCCCCCC
Q 014171          118 FIKPGK---KFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLCGRRPFWDKTEDG-IFKEVLRNKPDFRRKPW  191 (429)
Q Consensus       118 ~~~~~~---~~~~~~g~~~y~aPE~~~~~~--~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~~~~~~~~~~~  191 (429)
                      ......   ......|++.|+|||++.+..  +.++||||+|+++|+|++|..||.+..... ....+......  ...+
T Consensus       154 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~~  231 (276)
T 2yex_A          154 VFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKTY--LNPW  231 (276)
T ss_dssp             ECEETTEECCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSCTTSHHHHHHHTTCTT--STTG
T ss_pred             ccCCCcchhcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCchHHHHHHHhhhcccc--cCch
Confidence            654322   234567899999999987532  668999999999999999999998766543 33333333222  2234


Q ss_pred             CCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          192 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       192 ~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                      +.+++.+.++|.+||+.||.+|||++++++||||+....
T Consensus       232 ~~~~~~~~~li~~~l~~~p~~Rps~~~il~~~~~~~~~~  270 (276)
T 2yex_A          232 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKPLK  270 (276)
T ss_dssp             GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCCCC
T ss_pred             hhcCHHHHHHHHHHCCCCchhCCCHHHHhcCccccChhh
Confidence            568999999999999999999999999999999987643

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=100.00  E-value=7.6e-35  Score=281.66  Aligned_cols=187  Identities=21%  Similarity=0.313  Sum_probs=146.1

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|||||. |+|.+.+... ...+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++..
T Consensus       109 ~~lv~e~~~-~~l~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~---~~~~~kl~Dfg~~~~  183 (362)
T 3pg1_A          109 LYLVTELMR-TDLAQVIHDQ-RIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA---DNNDITICDFNLARE  183 (362)
T ss_dssp             EEEEEECCS-EEHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTCCEEECCTTC---
T ss_pred             EEEEEccCC-CCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEc---CCCCEEEEecCcccc
Confidence            368999998 6898888644 35799999999999999999999999999999999999998   578899999999986


Q ss_pred             ccCCCcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCC------------
Q 014171          119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKP------------  184 (429)
Q Consensus       119 ~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~------------  184 (429)
                      ...........|++.|+|||++.+  .++.++||||+||++|+|++|+.||.+.+.......+.....            
T Consensus       184 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  263 (362)
T 3pg1_A          184 DTADANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSS  263 (362)
T ss_dssp             ------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSC
T ss_pred             cccccccceecccceecCcHHhcCCCCCCcHhHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccc
Confidence            665555566788999999998864  468899999999999999999999998887776665543111            


Q ss_pred             ------------CCCCC----CCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          185 ------------DFRRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       185 ------------~~~~~----~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                                  ..+..    ..+..++.+.+||.+||+.||.+|||+.++++||||+....
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~~  325 (362)
T 3pg1_A          264 PSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFNPQRRISTEQALRHPYFESLFD  325 (362)
T ss_dssp             HHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGTTTCC
T ss_pred             hhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCChhhCCCHHHHHcCchhhhccC
Confidence                        11111    12456889999999999999999999999999999998643

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=100.00  E-value=3e-35  Score=281.29  Aligned_cols=190  Identities=25%  Similarity=0.319  Sum_probs=153.6

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCC------------
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE------------  104 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~------------  104 (429)
                      ...|+||||| +|+|.+++.......+++..+..++.||+.||.|||++||+||||||+||+++..+.            
T Consensus        90 ~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~  168 (339)
T 1z57_A           90 GHICIVFELL-GLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDE  168 (339)
T ss_dssp             TEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEE
T ss_pred             CcEEEEEcCC-CCCHHHHHHhcCCCCCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCcccccc
Confidence            3457899999 899999997775567999999999999999999999999999999999999984221            


Q ss_pred             ----CCCEEEeecccceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHH
Q 014171          105 ----DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV  179 (429)
Q Consensus       105 ----~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i  179 (429)
                          ++.+||+|||.+......  .....||+.|+|||++.+ .++.++||||+||++|+|++|..||.+.+..+....+
T Consensus       169 ~~~~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~  246 (339)
T 1z57_A          169 RTLINPDIKVVDFGSATYDDEH--HSTLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMM  246 (339)
T ss_dssp             EEESCCCEEECCCSSCEETTSC--CCSSCSCGGGCCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHH
T ss_pred             ccccCCCceEeeCcccccCccc--cccccCCccccChHHhhCCCCCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence                567999999999865432  345678999999999875 5689999999999999999999999888776655444


Q ss_pred             HhcCCCCCCC----------------CC------------------------CCCCHHHHHHHHHhccCCccCcCCHHHH
Q 014171          180 LRNKPDFRRK----------------PW------------------------PSISNSAKDFVKKLLVKDPRARLTAAQA  219 (429)
Q Consensus       180 ~~~~~~~~~~----------------~~------------------------~~~~~~~~~li~~~l~~dp~~R~s~~e~  219 (429)
                      .......+..                .|                        ...++++.+||.+||+.||.+|||+.++
T Consensus       247 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~el  326 (339)
T 1z57_A          247 ERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEFMLSQDVEHERLFDLIQKMLEYDPAKRITLREA  326 (339)
T ss_dssp             HHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             HHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhhcccchhhHHHHHHHHHHHhCcCcccccCHHHH
Confidence            3221111100                00                        1124678899999999999999999999


Q ss_pred             hCCCccccCC
Q 014171          220 LSHPWVREGG  229 (429)
Q Consensus       220 l~h~~~~~~~  229 (429)
                      ++||||+...
T Consensus       327 l~hp~f~~~~  336 (339)
T 1z57_A          327 LKHPFFDLLK  336 (339)
T ss_dssp             TTSGGGGGGG
T ss_pred             hcCHHHHHHh
Confidence            9999998753

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=100.00  E-value=9.4e-35  Score=274.09  Aligned_cols=185  Identities=23%  Similarity=0.416  Sum_probs=159.6

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.+| |.+++.......+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||.+.
T Consensus        82 ~~~lv~e~~~~~-l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~---~~~~~kl~dfg~~~  157 (305)
T 2wtk_C           82 KMYMVMEYCVCG-MQEMLDSVPEKRFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLT---TGGTLKISALGVAE  157 (305)
T ss_dssp             CEEEEEECCSEE-HHHHHHHSTTCSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCCTTCE
T ss_pred             eEEEEehhccCC-HHHHHHhCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEc---CCCcEEeecccccc
Confidence            347899999977 88888776667899999999999999999999999999999999999998   57899999999998


Q ss_pred             eccCC---CcccccccCCcccccccccCC---CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCC
Q 014171          118 FIKPG---KKFQDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW  191 (429)
Q Consensus       118 ~~~~~---~~~~~~~g~~~y~aPE~~~~~---~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  191 (429)
                      .....   .......|++.|+|||++.+.   .+.++||||+|+++|+|++|..||.+.+.......+......++    
T Consensus       158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~----  233 (305)
T 2wtk_C          158 ALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGKGSYAIP----  233 (305)
T ss_dssp             ECCTTCSSCEECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCC----
T ss_pred             ccCccccccccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhcCCCCCC----
Confidence            76432   223455789999999998753   26789999999999999999999999888888888877765443    


Q ss_pred             CCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          192 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       192 ~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                      ..+++.+.++|.+||+.||.+|||++++++||||+....
T Consensus       234 ~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~  272 (305)
T 2wtk_C          234 GDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKKHP  272 (305)
T ss_dssp             SSSCHHHHHHHHHHTCSSTTTSCCHHHHHHSHHHHSCCC
T ss_pred             CccCHHHHHHHHHHccCChhhCCCHHHHhcCcccccCCC
Confidence            367999999999999999999999999999999987654

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=100.00  E-value=7.5e-35  Score=274.06  Aligned_cols=215  Identities=24%  Similarity=0.384  Sum_probs=159.0

Q ss_pred             cccccccccccccccccCCCCCCcceee-ccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIV-LPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH   85 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~-~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~   85 (429)
                      ..++|+|++.+.+.+............. .....|+|||||+||+|.+++... ...+++..+..++.|++.||.|||++
T Consensus        57 ~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~  135 (303)
T 1zy4_A           57 ASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSE-NLNQQRDEYWRLFRQILEALSYIHSQ  135 (303)
T ss_dssp             TTCCCTTBCCEEEEEEECCCCCC------CEEEEEEEEECCCSCBHHHHHHHS-CGGGCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HhcCchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecCCCCCHHHhhhcc-ccccchHHHHHHHHHHHHHHHHHHhC
Confidence            4456777766666544322111111111 123457899999999999999654 35688999999999999999999999


Q ss_pred             CCeecCCCCCcEEEeecCCCCCEEEeecccceeccCC---------------CcccccccCCcccccccccC--CCCCCc
Q 014171           86 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG---------------KKFQDIVGSAYYVAPEVLKR--KSGPES  148 (429)
Q Consensus        86 ~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~---------------~~~~~~~g~~~y~aPE~~~~--~~~~~~  148 (429)
                      ||+||||||+||+++   .++.+||+|||.+......               .......|++.|+|||++.+  .++.++
T Consensus       136 ~i~H~dlkp~Nil~~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~  212 (303)
T 1zy4_A          136 GIIHRDLKPMNIFID---ESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKI  212 (303)
T ss_dssp             TCCCSCCCGGGEEEC---TTSCEEECCCCCCSCTTC-------------------------CTTSCHHHHTSCSCCCTHH
T ss_pred             CeecccCCHHhEEEc---CCCCEEEeeCcchhhcccccchhccccccccccccccccCCCcccccCcccccCCCCCcchh
Confidence            999999999999998   5788999999998765421               12234578999999999864  468899


Q ss_pred             chHHHHHHHHHHhhCCCCCCCC-ChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcccc
Q 014171          149 DVWSIGVITYILLCGRRPFWDK-TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE  227 (429)
Q Consensus       149 DiwslG~il~~l~~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~  227 (429)
                      ||||+||++|+|++   ||... ........+......++.......+..++++|.+||+.||.+|||+.++++||||+.
T Consensus       213 Di~slG~il~~l~~---p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~h~~~~~  289 (303)
T 1zy4_A          213 DMYSLGIIFFEMIY---PFSTGMERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNSGWLPV  289 (303)
T ss_dssp             HHHHHHHHHHHHHS---CCSSHHHHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHHSSCSCC
T ss_pred             hHHHHHHHHHHHHh---ccCCchhHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhCCCCcCC
Confidence            99999999999998   55433 333445555555555555555667888999999999999999999999999999976


Q ss_pred             C
Q 014171          228 G  228 (429)
Q Consensus       228 ~  228 (429)
                      .
T Consensus       290 ~  290 (303)
T 1zy4_A          290 K  290 (303)
T ss_dssp             C
T ss_pred             C
Confidence            4

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=100.00  E-value=5.5e-35  Score=282.96  Aligned_cols=185  Identities=26%  Similarity=0.431  Sum_probs=152.8

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+||||+. |+|.+++..   +.+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++..
T Consensus       105 ~~iv~e~~~-~~L~~~l~~---~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~---~~~~~kl~Dfg~a~~  177 (364)
T 3qyz_A          105 VYIVQDLME-TDLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLARV  177 (364)
T ss_dssp             EEEEEECCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCTTCEE
T ss_pred             EEEEEcccC-cCHHHHHHh---CCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEEC---CCCCEEEEeCcceEe
Confidence            468999998 589988854   4699999999999999999999999999999999999998   578899999999986


Q ss_pred             ccCCCc----ccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCC------
Q 014171          119 IKPGKK----FQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF------  186 (429)
Q Consensus       119 ~~~~~~----~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~------  186 (429)
                      ......    .....||+.|+|||++.+  .++.++||||+||++|+|++|+.||.+.+.......+.......      
T Consensus       178 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  257 (364)
T 3qyz_A          178 ADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN  257 (364)
T ss_dssp             CCGGGCBCCTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCHHHHH
T ss_pred             cCCCCCccccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCHHHHH
Confidence            643221    244589999999998743  36889999999999999999999999888777766654321110      


Q ss_pred             -----------------CCC----CCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          187 -----------------RRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       187 -----------------~~~----~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                                       ...    ..+.+++++.+||.+||+.||.+|||+.++++||||+....
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~hp~~~~~~~  322 (364)
T 3qyz_A          258 CIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYD  322 (364)
T ss_dssp             TCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTTCC
T ss_pred             HhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHHhcCcchhhccC
Confidence                             000    12457899999999999999999999999999999998643

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=100.00  E-value=7e-36  Score=289.98  Aligned_cols=183  Identities=19%  Similarity=0.201  Sum_probs=146.1

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHH------HHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDA------AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD  112 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~------~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~D  112 (429)
                      .|+|||||. |+|.+++.... ..+++...      ..++.||+.||.|||++||+||||||+|||++   .++.+||+|
T Consensus       163 ~~lv~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDikp~NIll~---~~~~~kL~D  237 (371)
T 3q60_A          163 YLLLMPAAS-VDLELLFSTLD-FVYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHFTPDNLFIM---PDGRLMLGD  237 (371)
T ss_dssp             EEEEECCCS-EEHHHHHHHHH-HSCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEC---TTSCEEECC
T ss_pred             EEEEecCCC-CCHHHHHHHhc-cccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcCCHHHEEEC---CCCCEEEEe
Confidence            579999999 89999997652 34455555      67779999999999999999999999999998   578999999


Q ss_pred             cccceeccCCCcccccccCCcccccccccC---CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHH--HH---HHhcCC
Q 014171          113 FGLSDFIKPGKKFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF--KE---VLRNKP  184 (429)
Q Consensus       113 fg~a~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~--~~---i~~~~~  184 (429)
                      ||+|......  .....+++.|+|||++.+   .++.++||||+||++|+|++|+.||.+.......  ..   ......
T Consensus       238 FG~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~  315 (371)
T 3q60_A          238 VSALWKVGTR--GPASSVPVTYAPREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSLRVPGTD  315 (371)
T ss_dssp             GGGEEETTCE--EEGGGSCGGGCCHHHHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCTTSCCCC
T ss_pred             cceeeecCCC--ccCccCCcCCcChhhccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhhhhcccc
Confidence            9999876432  224566799999999974   4689999999999999999999999776432110  00   111112


Q ss_pred             CCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          185 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       185 ~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      .+..+.++.+++.+.+||.+||+.||.+|||+.++++||||++.
T Consensus       316 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~f~~~  359 (371)
T 3q60_A          316 SLAFGSCTPLPDFVKTLIGRFLNFDRRRRLLPLEAMETPEFLQL  359 (371)
T ss_dssp             SCCCTTSSCCCHHHHHHHHHHTCSSTTTCCCHHHHTTSHHHHHH
T ss_pred             ccchhhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcCHHHHHH
Confidence            22333345789999999999999999999999999999999764

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=100.00  E-value=7.2e-35  Score=278.08  Aligned_cols=184  Identities=26%  Similarity=0.469  Sum_probs=149.0

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .++|||||.+|+|.+++     ..+++..+..++.||+.||.|||++||+||||||+||+++.  +...+||+|||+|..
T Consensus       108 ~~lv~e~~~~~~l~~~~-----~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~--~~~~~kl~Dfg~a~~  180 (330)
T 3nsz_A          108 PALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEF  180 (330)
T ss_dssp             EEEEEECCCCCCHHHHG-----GGCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET--TTTEEEECCCTTCEE
T ss_pred             eEEEEeccCchhHHHHH-----HhCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcC--CCCEEEEEeCCCceE
Confidence            46899999999999877     24899999999999999999999999999999999999984  334899999999988


Q ss_pred             ccCCCcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCCh-hHHHHHH-------------Hhc
Q 014171          119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTE-DGIFKEV-------------LRN  182 (429)
Q Consensus       119 ~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~i-------------~~~  182 (429)
                      ...........|++.|+|||++.+  .++.++||||+||++|+|++|+.||..... ......+             ...
T Consensus       181 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~  260 (330)
T 3nsz_A          181 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY  260 (330)
T ss_dssp             CCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHT
T ss_pred             cCCCCccccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhcCCchhhhHHHHh
Confidence            776666666789999999999864  468899999999999999999999955432 2222211             111


Q ss_pred             CCCCC--------------------CCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          183 KPDFR--------------------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       183 ~~~~~--------------------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      .....                    ......+++++.+||.+||+.||.+|||++++|+||||+...
T Consensus       261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpta~e~l~hp~f~~~~  327 (330)
T 3nsz_A          261 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV  327 (330)
T ss_dssp             TCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSCCHHHHHTSGGGTTCC
T ss_pred             ccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCCCHHHHhcCccHhhhc
Confidence            11111                    111123789999999999999999999999999999999764

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=100.00  E-value=2e-35  Score=282.32  Aligned_cols=186  Identities=26%  Similarity=0.413  Sum_probs=148.3

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.+|+|.+++..  ...+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||.+.
T Consensus        98 ~~~lv~e~~~~~~l~~~~~~--~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~~~  172 (331)
T 4aaa_A           98 RWYLVFEFVDHTILDDLELF--PNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVS---QSGVVKLCDFGFAR  172 (331)
T ss_dssp             EEEEEEECCSEEHHHHHHHS--TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEECCCTTC-
T ss_pred             EEEEEEecCCcchHHHHHhh--ccCCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEc---CCCcEEEEeCCCce
Confidence            35789999999988887643  36799999999999999999999999999999999999998   57899999999997


Q ss_pred             eccCC-CcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCC---------
Q 014171          118 FIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD---------  185 (429)
Q Consensus       118 ~~~~~-~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~---------  185 (429)
                      ..... .......|++.|+|||++.+  .++.++||||+||++|+|++|+.||.+.+.......+......         
T Consensus       173 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (331)
T 4aaa_A          173 TLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELF  252 (331)
T ss_dssp             -----------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHHH
T ss_pred             eecCCccccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhhhHh
Confidence            65432 23345678999999999875  4588999999999999999999999988877665554421110         


Q ss_pred             ----------CCC--------CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          186 ----------FRR--------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       186 ----------~~~--------~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                                .+.        ..++.+++.+.+||.+||+.||.+|||++++|+||||+..
T Consensus       253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~hp~f~~~  313 (331)
T 4aaa_A          253 NKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLHHDFFQMD  313 (331)
T ss_dssp             HHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGSHHHHGG
T ss_pred             hhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhcCchhccC
Confidence                      000        0123578999999999999999999999999999999764

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=100.00  E-value=4.9e-35  Score=285.14  Aligned_cols=190  Identities=21%  Similarity=0.237  Sum_probs=152.9

Q ss_pred             cccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH--HCCCeecCCCCCcEEEeecCCCCCEEEeec
Q 014171           36 PLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH--LHGLVHRDMKPENFLFKSAKEDSSLKATDF  113 (429)
Q Consensus        36 ~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH--~~~i~H~dikp~Nil~~~~~~~~~~kL~Df  113 (429)
                      ....|+|||||. |+|.+++.......+++..+..++.||+.||.|||  +.||+||||||+|||++.. ..+.+||+||
T Consensus       128 ~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~-~~~~~kL~DF  205 (382)
T 2vx3_A          128 RNHLCLVFEMLS-YNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNP-KRSAIKIVDF  205 (382)
T ss_dssp             TTEEEEEEECCC-CBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESST-TSCCEEECCC
T ss_pred             CCceEEEEecCC-CCHHHHHhhcCcCCCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecC-CCCcEEEEec
Confidence            345679999996 59999998775567999999999999999999999  5799999999999999631 3678999999


Q ss_pred             ccceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCC-----
Q 014171          114 GLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR-----  187 (429)
Q Consensus       114 g~a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~-----  187 (429)
                      |+|......  .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+.+.......+.......+     
T Consensus       206 G~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  283 (382)
T 2vx3_A          206 GSSCQLGQR--IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAHILD  283 (382)
T ss_dssp             TTCEETTCC--CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHHHHT
T ss_pred             cCceecccc--cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHH
Confidence            999876432  345688999999999875 568999999999999999999999999888777766654211100     


Q ss_pred             ------------------------------CCCCCC-------------------------CCHHHHHHHHHhccCCccC
Q 014171          188 ------------------------------RKPWPS-------------------------ISNSAKDFVKKLLVKDPRA  212 (429)
Q Consensus       188 ------------------------------~~~~~~-------------------------~~~~~~~li~~~l~~dp~~  212 (429)
                                                    ++....                         .++++++||.+||+.||.+
T Consensus       284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~  363 (382)
T 2vx3_A          284 QAPKARKFFEKLPDGTWNLKKTKDGKREYKPPGTRKLHNILGVETGGPGGRRAGESGHTVADYLKFKDLILRMLDYDPKT  363 (382)
T ss_dssp             TCTTHHHHEEECTTSCEEECCCCTTCCCSCCTTCSCHHHHHTTTTTSGGGTTTTCTTCCHHHHHHHHHHHHHHTCSCTTT
T ss_pred             hhHHHHHHHHhccccccccccccccccccCCcchhhHHHHhhccccCCCccccccccccchhhHHHHHHHHHhcCCChhh
Confidence                                          000000                         0137899999999999999


Q ss_pred             cCCHHHHhCCCccccCC
Q 014171          213 RLTAAQALSHPWVREGG  229 (429)
Q Consensus       213 R~s~~e~l~h~~~~~~~  229 (429)
                      |||++++|+||||+...
T Consensus       364 Rpta~e~L~hp~f~~~~  380 (382)
T 2vx3_A          364 RIQPYYALQHSFFKKTA  380 (382)
T ss_dssp             SCCHHHHTTSGGGCC--
T ss_pred             CCCHHHHhcCcccccCC
Confidence            99999999999998753

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=100.00  E-value=2.1e-34  Score=271.64  Aligned_cols=184  Identities=27%  Similarity=0.445  Sum_probs=157.6

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||.||+|.+++..   +.+++..+..++.|++.||.|||++||+||||||+||+++   .++.+||+|||.+
T Consensus        93 ~~~~lv~e~~~~~~L~~~~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~Dfg~~  166 (303)
T 3a7i_A           93 TKLWIIMEYLGGGSALDLLEP---GPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLS---EHGEVKLADFGVA  166 (303)
T ss_dssp             TEEEEEEECCTTEEHHHHHTT---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTC
T ss_pred             CeEEEEEEeCCCCcHHHHHhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEEC---CCCCEEEeecccc
Confidence            345789999999999998832   5799999999999999999999999999999999999998   5789999999999


Q ss_pred             eeccCCC-cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~~~~~~-~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      ....... ......|++.|+|||++.+ .++.++||||+|+++|+|++|..||...........+......   .....+
T Consensus       167 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~~  243 (303)
T 3a7i_A          167 GQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPKNNPP---TLEGNY  243 (303)
T ss_dssp             EECBTTBCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC---CCCSSC
T ss_pred             eecCccccccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhcCCCC---CCcccc
Confidence            8765433 2345678999999999875 4588999999999999999999999888777776666655432   223468


Q ss_pred             CHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      +..+.++|.+||+.||.+|||+.++++||||....
T Consensus       244 ~~~l~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~  278 (303)
T 3a7i_A          244 SKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNA  278 (303)
T ss_dssp             CHHHHHHHHHHCCSSGGGSCCHHHHTTCHHHHHHC
T ss_pred             CHHHHHHHHHHcCCChhhCcCHHHHhhChhhhcCC
Confidence            99999999999999999999999999999998754

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=100.00  E-value=8.6e-35  Score=280.02  Aligned_cols=190  Identities=24%  Similarity=0.341  Sum_probs=153.0

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeec--------------
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA--------------  102 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~--------------  102 (429)
                      ...|+||||| +|+|.+++.......+++..+..++.||+.||.|||++||+||||||+||+++..              
T Consensus        95 ~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~  173 (355)
T 2eu9_A           95 GHMCIAFELL-GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEE  173 (355)
T ss_dssp             TEEEEEEECC-CCBHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCE
T ss_pred             CeEEEEEecc-CCChHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccc
Confidence            4567999999 6888888877655689999999999999999999999999999999999999421              


Q ss_pred             --CCCCCEEEeecccceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHH
Q 014171          103 --KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEV  179 (429)
Q Consensus       103 --~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i  179 (429)
                        ...+.+||+|||++......  .....||+.|+|||++.+ .++.++||||+||++|+|++|..||.+.........+
T Consensus       174 ~~~~~~~~kl~Dfg~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~  251 (355)
T 2eu9_A          174 KSVKNTSIRVADFGSATFDHEH--HTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMM  251 (355)
T ss_dssp             EEESCCCEEECCCTTCEETTSC--CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHH
T ss_pred             cccCCCcEEEeecCcccccccc--ccCCcCCCcccCCeeeecCCCCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence              14688999999999865432  345679999999999864 5689999999999999999999999888776655444


Q ss_pred             HhcCCCCCCC----------------CC------------------------CCCCHHHHHHHHHhccCCccCcCCHHHH
Q 014171          180 LRNKPDFRRK----------------PW------------------------PSISNSAKDFVKKLLVKDPRARLTAAQA  219 (429)
Q Consensus       180 ~~~~~~~~~~----------------~~------------------------~~~~~~~~~li~~~l~~dp~~R~s~~e~  219 (429)
                      .......+..                .|                        ...+.++.+||.+||+.||.+|||+.++
T Consensus       252 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~  331 (355)
T 2eu9_A          252 EKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSYMLQDSLEHVQLFDLMRRMLEFDPAQRITLAEA  331 (355)
T ss_dssp             HHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGGCSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred             HHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCcccccccccchhHHHHHHHHHHHhcCChhhCcCHHHH
Confidence            3322111100                00                        1123578899999999999999999999


Q ss_pred             hCCCccccCC
Q 014171          220 LSHPWVREGG  229 (429)
Q Consensus       220 l~h~~~~~~~  229 (429)
                      ++||||+...
T Consensus       332 l~hp~f~~~~  341 (355)
T 2eu9_A          332 LLHPFFAGLT  341 (355)
T ss_dssp             TTSGGGGGCC
T ss_pred             hcChhhcCCC
Confidence            9999999753

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=100.00  E-value=2.8e-34  Score=272.05  Aligned_cols=189  Identities=28%  Similarity=0.458  Sum_probs=158.0

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||.||+|.+++... ...+++..+..++.||+.||.|||++||+|+||||+||+++   .++.+||+|||.+
T Consensus        97 ~~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~---~~~~~kl~dfg~~  172 (314)
T 3com_A           97 TDLWIVMEYCGAGSVSDIIRLR-NKTLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLN---TEGHAKLADFGVA  172 (314)
T ss_dssp             TEEEEEEECCTTEEHHHHHHHH-TCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTC
T ss_pred             CEEEEEeecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEEC---CCCCEEEeecccc
Confidence            3457899999999999988643 46899999999999999999999999999999999999998   4788999999999


Q ss_pred             eeccCCC-cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~~~~~~-~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      ....... ......|++.|+|||++.+ .++.++||||+|+++|+|++|..||.+.........+...... .......+
T Consensus       173 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~  251 (314)
T 3com_A          173 GQLTDTMAKRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMIPTNPPP-TFRKPELW  251 (314)
T ss_dssp             EECBTTBSCBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCC-CCSSGGGS
T ss_pred             hhhhhhccccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhcCCCc-ccCCcccC
Confidence            8765432 2345578999999999875 4588999999999999999999999887766665555444322 11223457


Q ss_pred             CHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                      +..+.++|.+||..||.+|||+.++++||||+....
T Consensus       252 ~~~l~~li~~~l~~dp~~Rpt~~~ll~~~~~~~~~~  287 (314)
T 3com_A          252 SDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKG  287 (314)
T ss_dssp             CHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHTCCC
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHHhCHHHhcCCc
Confidence            899999999999999999999999999999987643

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=100.00  E-value=1e-34  Score=273.38  Aligned_cols=187  Identities=28%  Similarity=0.435  Sum_probs=153.8

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++... ...+++..+..++.||+.||.|||++|++||||||+||+++   .++.+||+|||++.
T Consensus        90 ~~~lv~e~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~~  165 (302)
T 2j7t_A           90 KLWIMIEFCPGGAVDAIMLEL-DRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMT---LEGDIRLADFGVSA  165 (302)
T ss_dssp             CEEEEEECCTTEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEC---TTSCEEECCCHHHH
T ss_pred             eEEEEEEeCCCCcHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEC---CCCCEEEEECCCCc
Confidence            457899999999999988654 36799999999999999999999999999999999999998   57889999999875


Q ss_pred             eccCC-CcccccccCCccccccccc------CCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCC
Q 014171          118 FIKPG-KKFQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP  190 (429)
Q Consensus       118 ~~~~~-~~~~~~~g~~~y~aPE~~~------~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  190 (429)
                      ..... .......|++.|+|||++.      ..++.++||||+|+++|+|++|..||...+.......+........ ..
T Consensus       166 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-~~  244 (302)
T 2j7t_A          166 KNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKSDPPTL-LT  244 (302)
T ss_dssp             HHHHHHHC-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCCCCC-SS
T ss_pred             cccccccccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHhccCCccc-CC
Confidence            43211 1123457899999999983      3458899999999999999999999998887777776666543221 12


Q ss_pred             CCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          191 WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       191 ~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      ...++..+.++|.+||..||.+|||+.++++||||+...
T Consensus       245 ~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~~  283 (302)
T 2j7t_A          245 PSKWSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSIT  283 (302)
T ss_dssp             GGGSCHHHHHHHHHHSCSCTTTSCCHHHHTTSTTTTTCC
T ss_pred             ccccCHHHHHHHHHHcccChhhCCCHHHHhcChHHhhhc
Confidence            245789999999999999999999999999999998764

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=100.00  E-value=7.7e-35  Score=281.46  Aligned_cols=185  Identities=24%  Similarity=0.381  Sum_probs=149.6

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~-~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      ...|+|||||.||+|.+++.+.  +.+++..+..++.|++.||.|||+. ||+||||||+||+++   .++.+||+|||+
T Consensus       104 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~  178 (360)
T 3eqc_A          104 GEISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN---SRGEIKLCDFGV  178 (360)
T ss_dssp             TEEEEEECCCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEEC---TTCCEEECCCCC
T ss_pred             CEEEEEEECCCCCCHHHHHHHc--CCCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEEC---CCCCEEEEECCC
Confidence            3457899999999999999665  5799999999999999999999995 999999999999998   578899999999


Q ss_pred             ceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHH----------------
Q 014171          116 SDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE----------------  178 (429)
Q Consensus       116 a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~----------------  178 (429)
                      +...... ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||...........                
T Consensus       179 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  257 (360)
T 3eqc_A          179 SGQLIDS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRP  257 (360)
T ss_dssp             CHHHHHH-C----CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCCCHHHHHHHHC--------------
T ss_pred             Ccccccc-cccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccCCCCCCCc
Confidence            8755322 2234578999999999875 458899999999999999999999987665443221                


Q ss_pred             --------------------------HHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          179 --------------------------VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       179 --------------------------i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                                                +.....  +......++.++++||.+||+.||.+|||++++++||||+...
T Consensus       258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~  332 (360)
T 3eqc_A          258 RTPGRPLNKFGMDSRPPMAIFELLDYIVNEPP--PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRSD  332 (360)
T ss_dssp             ----------------CCCHHHHHHHHHHSCC--CCCCTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHTSHHHHHHH
T ss_pred             ccCCCcccccccCCCCcccchhhhhHHhccCC--CCCCcccccHHHHHHHHHHhhcChhhCCCHHHHhhChHhhcch
Confidence                                      111211  1112234788999999999999999999999999999998753

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=100.00  E-value=1.2e-34  Score=281.28  Aligned_cols=206  Identities=30%  Similarity=0.440  Sum_probs=157.7

Q ss_pred             ccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 014171            8 DTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGL   87 (429)
Q Consensus         8 ~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i   87 (429)
                      .++|+|++.+++++.......      .....|+|||||. |+|.+.+    +..+++..+..++.||+.||.|||++||
T Consensus        97 ~l~h~niv~~~~~~~~~~~~~------~~~~~~lv~e~~~-~~l~~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~i  165 (371)
T 4exu_A           97 HMQHENVIGLLDVFTPASSLR------NFYDFYLVMPFMQ-TDLQKIM----GMEFSEEKIQYLVYQMLKGLKYIHSAGV  165 (371)
T ss_dssp             HCCCTTBCCCSEEECSCSSST------TCCCCEEEEECCC-EEHHHHT----TSCCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             hcCCCCchhhhhheeccCCcc------cceeEEEEEcccc-ccHHHHh----hcCCCHHHHHHHHHHHHHHHHHHHHCCC
Confidence            445666666666554322111      1112378999998 6887766    2459999999999999999999999999


Q ss_pred             eecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCC
Q 014171           88 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRR  165 (429)
Q Consensus        88 ~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~  165 (429)
                      +||||||+||+++   .++.+||+|||++......  .....||+.|+|||++.+  .++.++||||+||++|+|++|+.
T Consensus       166 vH~Dikp~NIll~---~~~~~kL~Dfg~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~  240 (371)
T 4exu_A          166 VHRDLKPGNLAVN---EDCELKILDFGLARHADAE--MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKT  240 (371)
T ss_dssp             CCSCCCGGGEEEC---TTCCEEECSTTCC----------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSC
T ss_pred             cCCCcCHHHeEEC---CCCCEEEEecCcccccccC--cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCC
Confidence            9999999999998   5788999999999765432  345678999999999865  56899999999999999999999


Q ss_pred             CCCCCChhHHHHHHHhcCC-----------------------CCCCC----CCCCCCHHHHHHHHHhccCCccCcCCHHH
Q 014171          166 PFWDKTEDGIFKEVLRNKP-----------------------DFRRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQ  218 (429)
Q Consensus       166 pf~~~~~~~~~~~i~~~~~-----------------------~~~~~----~~~~~~~~~~~li~~~l~~dp~~R~s~~e  218 (429)
                      ||.+.+..+....+.....                       ..+..    .++.+++.+.+||.+||+.||.+|||+++
T Consensus       241 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e  320 (371)
T 4exu_A          241 LFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQ  320 (371)
T ss_dssp             SCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCHHH
T ss_pred             CCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCHHH
Confidence            9998887766665543111                       11110    12457899999999999999999999999


Q ss_pred             HhCCCccccCC
Q 014171          219 ALSHPWVREGG  229 (429)
Q Consensus       219 ~l~h~~~~~~~  229 (429)
                      +++||||+...
T Consensus       321 ll~hp~f~~~~  331 (371)
T 4exu_A          321 ALTHPFFEPFR  331 (371)
T ss_dssp             HHTSGGGTTTC
T ss_pred             HhcCcccccCC
Confidence            99999998654

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=100.00  E-value=7.3e-35  Score=277.89  Aligned_cols=181  Identities=22%  Similarity=0.349  Sum_probs=143.2

Q ss_pred             ceeEeeecCCCChHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           39 KLRRIRLCEGGELLDRILAKKD-SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      .|+|||||+||+|.+++..... ...++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++.
T Consensus       136 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kL~DfG~a~  212 (332)
T 3qd2_B          136 LYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFT---MDDVVKVGDFGLVT  212 (332)
T ss_dssp             EEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCTTCE
T ss_pred             EEEEEEecCCCCHHHHHhcccCccchhhHHHHHHHHHHHHHHHHHHhCCeeecCCCcccEEEe---CCCCEEEeecCccc
Confidence            5789999999999999966432 2356777899999999999999999999999999999998   57899999999998


Q ss_pred             eccCCC-------------cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcC
Q 014171          118 FIKPGK-------------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK  183 (429)
Q Consensus       118 ~~~~~~-------------~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~  183 (429)
                      ......             ......||+.|+|||++.+ .++.++||||+||++|+|++|..|+..  .......+....
T Consensus       213 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~--~~~~~~~~~~~~  290 (332)
T 3qd2_B          213 AMDQDEEEQTVLTPMPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQME--RVRIITDVRNLK  290 (332)
T ss_dssp             ECSCC--------------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHH--HHHHHHHHHTTC
T ss_pred             ccccchhhccccccccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhH--HHHHHHHhhccC
Confidence            765432             2234579999999999875 568999999999999999998776421  112222222221


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcccc
Q 014171          184 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE  227 (429)
Q Consensus       184 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~  227 (429)
                         .+..+...++.+++||.+||+.||.+|||++++++||||++
T Consensus       291 ---~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~~~f~~  331 (332)
T 3qd2_B          291 ---FPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIENAIFEN  331 (332)
T ss_dssp             ---CCHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHSTTCCC
T ss_pred             ---CCcccccCChhHHHHHHHHccCCCCcCCCHHHHhhchhhhc
Confidence               11112345778899999999999999999999999999975

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=100.00  E-value=4.8e-35  Score=278.16  Aligned_cols=186  Identities=22%  Similarity=0.370  Sum_probs=149.3

Q ss_pred             ceeEeeecCCCChHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeec-CCCCCEEEeecccc
Q 014171           39 KLRRIRLCEGGELLDRILAKKD-SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA-KEDSSLKATDFGLS  116 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~-~~~~~~kL~Dfg~a  116 (429)
                      .|+|||||.||+|.+++..... ..+++..+..++.||+.||.|||++||+||||||+||++... ...+.+||+|||++
T Consensus        84 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a  163 (319)
T 4euu_A           84 KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA  163 (319)
T ss_dssp             EEEEEECCTTCBHHHHHHSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTC
T ss_pred             EEEEEeCCCCCCHHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCc
Confidence            4689999999999999976532 339999999999999999999999999999999999998321 24567999999999


Q ss_pred             eeccCCCcccccccCCccccccccc---------CCCCCCcchHHHHHHHHHHhhCCCCCCCCC----hhHHHHHHHhcC
Q 014171          117 DFIKPGKKFQDIVGSAYYVAPEVLK---------RKSGPESDVWSIGVITYILLCGRRPFWDKT----EDGIFKEVLRNK  183 (429)
Q Consensus       117 ~~~~~~~~~~~~~g~~~y~aPE~~~---------~~~~~~~DiwslG~il~~l~~g~~pf~~~~----~~~~~~~i~~~~  183 (429)
                      .............||+.|+|||++.         ..++.++||||+||++|+|++|+.||....    .......+..+.
T Consensus       164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~  243 (319)
T 4euu_A          164 RELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK  243 (319)
T ss_dssp             EECCTTCCBCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHHHC
T ss_pred             eecCCCCceeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhcCC
Confidence            9887666666778999999999884         456889999999999999999999996433    234455555544


Q ss_pred             CCC-------------------CC--CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCc
Q 014171          184 PDF-------------------RR--KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW  224 (429)
Q Consensus       184 ~~~-------------------~~--~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~  224 (429)
                      +.-                   +.  .....++..+.++|.+||+.||.+|||++|+++||=
T Consensus       244 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~dP~~R~s~~ell~h~~  305 (319)
T 4euu_A          244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFAETS  305 (319)
T ss_dssp             CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHHHHH
T ss_pred             CcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccCChhhhccHHHhhhccH
Confidence            311                   10  011123457889999999999999999999999874

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=100.00  E-value=8.2e-35  Score=276.11  Aligned_cols=218  Identities=25%  Similarity=0.372  Sum_probs=166.1

Q ss_pred             cccccccccccccccccCCCCCCc--ceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRP--MEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL   84 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~--~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~   84 (429)
                      +.++|+|++.+++++.........  .........|+|||||. |+|.+++.   .+.+++..+..++.||+.||.|||+
T Consensus        63 ~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~~~---~~~~~~~~~~~~~~qi~~~l~~lH~  138 (320)
T 2i6l_A           63 RRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYME-TDLANVLE---QGPLLEEHARLFMYQLLRGLKYIHS  138 (320)
T ss_dssp             HTCCCTTBCCEEEEECTTSCBCCC----CCSCSEEEEEEECCS-EEHHHHHT---TCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HhcCCCCeeEEEEeccccccccccccccccccCceeEEeeccC-CCHHHHhh---cCCccHHHHHHHHHHHHHHHHHHHh
Confidence            455677777777665432211110  01112234578999998 69998883   3579999999999999999999999


Q ss_pred             CCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCC----CcccccccCCccccccccc--CCCCCCcchHHHHHHHH
Q 014171           85 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG----KKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITY  158 (429)
Q Consensus        85 ~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~----~~~~~~~g~~~y~aPE~~~--~~~~~~~DiwslG~il~  158 (429)
                      +||+||||||+||+++.  .++.+||+|||.+......    .......+++.|+|||++.  ..++.++||||+||++|
T Consensus       139 ~~i~H~dlkp~Nil~~~--~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~  216 (320)
T 2i6l_A          139 ANVLHRDLKPANLFINT--EDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFA  216 (320)
T ss_dssp             TTCBCCCCSGGGEEEET--TTTEEEECCCTTCBCC--------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHHH
T ss_pred             CCEecCCCCHHHEEEcC--CCCeEEEccCccccccCCCcccccccccccccccccCcHHhcCcccCCchhhhHhHHHHHH
Confidence            99999999999999974  4578999999999865432    2223456789999999875  35688999999999999


Q ss_pred             HHhhCCCCCCCCChhHHHHHHHhcCCCCC----------------------C----CCCCCCCHHHHHHHHHhccCCccC
Q 014171          159 ILLCGRRPFWDKTEDGIFKEVLRNKPDFR----------------------R----KPWPSISNSAKDFVKKLLVKDPRA  212 (429)
Q Consensus       159 ~l~~g~~pf~~~~~~~~~~~i~~~~~~~~----------------------~----~~~~~~~~~~~~li~~~l~~dp~~  212 (429)
                      +|++|+.||.+.........+....+...                      .    ..++.++.++++||.+||+.||.+
T Consensus       217 el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~  296 (320)
T 2i6l_A          217 EMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMD  296 (320)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGGG
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCccc
Confidence            99999999998887777666654432111                      0    012468999999999999999999


Q ss_pred             cCCHHHHhCCCccccCCC
Q 014171          213 RLTAAQALSHPWVREGGD  230 (429)
Q Consensus       213 R~s~~e~l~h~~~~~~~~  230 (429)
                      |||++++++||||+....
T Consensus       297 Rpt~~ell~hp~~~~~~~  314 (320)
T 2i6l_A          297 RLTAEEALSHPYMSIYSF  314 (320)
T ss_dssp             SCCHHHHHTSHHHHTTCC
T ss_pred             cCCHHHHhCCcccccccC
Confidence            999999999999987643

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=100.00  E-value=1.3e-34  Score=271.68  Aligned_cols=189  Identities=25%  Similarity=0.359  Sum_probs=149.3

Q ss_pred             cceeEeeecCCCChHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           38 RKLRRIRLCEGGELLDRILAKKD-SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ..++|||||.||+|.+++..... ..+++..+..++.||+.||.|||++||+||||||+||+++.  .++.+||+|||.+
T Consensus        93 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~--~~~~~kl~Dfg~~  170 (295)
T 2clq_A           93 FIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINT--YSGVLKISDFGTS  170 (295)
T ss_dssp             EEEEEEECCSEEEHHHHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET--TTCCEEECCTTTC
T ss_pred             cEEEEEEeCCCCCHHHHHHhhccCCCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEEC--CCCCEEEeecccc
Confidence            45689999999999999976532 35679999999999999999999999999999999999983  3679999999999


Q ss_pred             eeccCCC-cccccccCCcccccccccCC---CCCCcchHHHHHHHHHHhhCCCCCCCCChhHH-HHHHHhcCCCCCCCCC
Q 014171          117 DFIKPGK-KFQDIVGSAYYVAPEVLKRK---SGPESDVWSIGVITYILLCGRRPFWDKTEDGI-FKEVLRNKPDFRRKPW  191 (429)
Q Consensus       117 ~~~~~~~-~~~~~~g~~~y~aPE~~~~~---~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~-~~~i~~~~~~~~~~~~  191 (429)
                      ....... ......|++.|+|||++.+.   ++.++||||+|+++|+|++|+.||........ ........  ......
T Consensus       171 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~--~~~~~~  248 (295)
T 2clq_A          171 KRLAGINPCTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQAAMFKVGMFK--VHPEIP  248 (295)
T ss_dssp             EESCC-----CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGGSSHHHHHHHHHHHC--CCCCCC
T ss_pred             cccCCCCCcccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCCCchhHHHHhhcccc--cccccc
Confidence            8765322 23455789999999998642   67899999999999999999999976543322 11111111  122233


Q ss_pred             CCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          192 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       192 ~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                      ..++..+.++|.+||+.||.+|||++++++||||+....
T Consensus       249 ~~~~~~~~~li~~~l~~dp~~Rps~~~ll~~~~~~~~~~  287 (295)
T 2clq_A          249 ESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSK  287 (295)
T ss_dssp             TTSCHHHHHHHHHTTCSSTTTSCCHHHHHTSGGGCC---
T ss_pred             ccCCHHHHHHHHHHccCChhhCCCHHHHhcChhhhhccc
Confidence            568999999999999999999999999999999987643

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=100.00  E-value=8.6e-35  Score=284.46  Aligned_cols=187  Identities=22%  Similarity=0.342  Sum_probs=145.4

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCcEEEeecC-------------
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAK-------------  103 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~-~i~H~dikp~Nil~~~~~-------------  103 (429)
                      ..|+||||| +|+|.+.+.......+++..++.++.||+.||.|||++ ||+||||||+|||++..+             
T Consensus       119 ~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~  197 (397)
T 1wak_A          119 HICMVFEVL-GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEW  197 (397)
T ss_dssp             EEEEEECCC-CCBHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC--
T ss_pred             eEEEEEecc-CccHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHH
Confidence            357899999 67888888776557799999999999999999999998 999999999999998421             


Q ss_pred             ---------------------------------CCCCEEEeecccceeccCCCcccccccCCcccccccccC-CCCCCcc
Q 014171          104 ---------------------------------EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESD  149 (429)
Q Consensus       104 ---------------------------------~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~D  149 (429)
                                                       ....+||+|||.|......  .....||+.|+|||++.+ .++.++|
T Consensus       198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~D  275 (397)
T 1wak_A          198 QRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH--FTEDIQTRQYRSLEVLIGSGYNTPAD  275 (397)
T ss_dssp             -------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC--SCSCCSCGGGCCHHHHHTSCCCTHHH
T ss_pred             hhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc--CccCCCCCcccCChhhcCCCCCcHHH
Confidence                                             1137999999999876533  345578999999999875 4688999


Q ss_pred             hHHHHHHHHHHhhCCCCCCCCCh------hHHHHHHHhcCCCCCC-----------------------------------
Q 014171          150 VWSIGVITYILLCGRRPFWDKTE------DGIFKEVLRNKPDFRR-----------------------------------  188 (429)
Q Consensus       150 iwslG~il~~l~~g~~pf~~~~~------~~~~~~i~~~~~~~~~-----------------------------------  188 (429)
                      |||+||++|+|++|+.||.+.+.      ......+.......+.                                   
T Consensus       276 iwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (397)
T 1wak_A          276 IWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLV  355 (397)
T ss_dssp             HHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHH
T ss_pred             HHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCChHHhhcccccccccCCccccccccccCCcchhHhhh
Confidence            99999999999999999976542      2222222111000000                                   


Q ss_pred             ---CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcccc
Q 014171          189 ---KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE  227 (429)
Q Consensus       189 ---~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~  227 (429)
                         ......+..+.+||.+||+.||.+|||++++|+||||+.
T Consensus       356 ~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~hp~~~~  397 (397)
T 1wak_A          356 EKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLNS  397 (397)
T ss_dssp             HTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHTSGGGGC
T ss_pred             hhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhhCccccC
Confidence               000122456889999999999999999999999999973

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=100.00  E-value=6.3e-35  Score=280.25  Aligned_cols=183  Identities=28%  Similarity=0.512  Sum_probs=145.4

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+||| |.+|+|.+++...  +.+++.++..++.||+.||.|||++||+||||||+|||++    ++.+||+|||++.
T Consensus        83 ~~~lv~e-~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~----~~~~kl~DFG~a~  155 (343)
T 3dbq_A           83 YIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIAN  155 (343)
T ss_dssp             EEEEEEC-CCSEEHHHHHHHS--CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE----TTEEEECCCSSSC
T ss_pred             EEEEEEe-CCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE----CCcEEEeeccccc
Confidence            4578999 6688999999654  6899999999999999999999999999999999999997    5789999999998


Q ss_pred             eccCCCc---ccccccCCccccccccc------------CCCCCCcchHHHHHHHHHHhhCCCCCCCCChh-HHHHHHHh
Q 014171          118 FIKPGKK---FQDIVGSAYYVAPEVLK------------RKSGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLR  181 (429)
Q Consensus       118 ~~~~~~~---~~~~~g~~~y~aPE~~~------------~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~~  181 (429)
                      .......   .....||+.|+|||++.            ..++.++||||+||++|+|++|+.||.+.... .....+..
T Consensus       156 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~  235 (343)
T 3dbq_A          156 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID  235 (343)
T ss_dssp             CC------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHC
T ss_pred             ccCcccccccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhhhHHHHHHHHhc
Confidence            7643322   23567999999999985            34577899999999999999999999765443 33344443


Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          182 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      ......  .....+..+.+||.+||+.||.+|||+.++++||||+...
T Consensus       236 ~~~~~~--~~~~~~~~l~~li~~~L~~dp~~Rpt~~e~l~hp~~~~~~  281 (343)
T 3dbq_A          236 PNHEIE--FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  281 (343)
T ss_dssp             TTSCCC--CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHSCC
T ss_pred             CCcccC--CcccCCHHHHHHHHHHcCCChhHCCCHHHHHhCccccccC
Confidence            332222  2234678999999999999999999999999999998654

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=100.00  E-value=1.4e-34  Score=280.24  Aligned_cols=186  Identities=19%  Similarity=0.231  Sum_probs=156.7

Q ss_pred             cceeEeeecCCCChHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEee
Q 014171           38 RKLRRIRLCEGGELLDRILAKKD-----SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD  112 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~-----~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~D  112 (429)
                      ..|+|||||.||+|.+++...+.     ..+++..+..++.||+.||.|||++||+||||||+|||++..+....+||+|
T Consensus       148 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~D  227 (367)
T 3l9p_A          148 PRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGD  227 (367)
T ss_dssp             SCEEEEECCTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred             CCEEEEEeCCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECC
Confidence            34789999999999999976532     4599999999999999999999999999999999999999655566799999


Q ss_pred             cccceeccC---CCcccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCC
Q 014171          113 FGLSDFIKP---GKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFR  187 (429)
Q Consensus       113 fg~a~~~~~---~~~~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~  187 (429)
                      ||+|+....   ........||+.|+|||++. +.++.++||||+||++|+|++ |..||.+.........+..+.... 
T Consensus       228 FG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~~-  306 (367)
T 3l9p_A          228 FGMARDIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD-  306 (367)
T ss_dssp             CHHHHHHHHHSSCTTCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCC-
T ss_pred             CccccccccccccccCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCC-
Confidence            999975422   12233456789999999885 456889999999999999998 999999998888888777665322 


Q ss_pred             CCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccc
Q 014171          188 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR  226 (429)
Q Consensus       188 ~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~  226 (429)
                        ....++..+.+||.+||+.||.+|||+.+++++.++-
T Consensus       307 --~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~  343 (367)
T 3l9p_A          307 --PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  343 (367)
T ss_dssp             --CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --CCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence              2346899999999999999999999999999887754

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=100.00  E-value=3.2e-34  Score=272.85  Aligned_cols=210  Identities=19%  Similarity=0.225  Sum_probs=153.2

Q ss_pred             ccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcC----CCCCHHHHHHHHHHHHHHHHHHH
Q 014171            8 DTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKD----SRYTEKDAAVVVRQMLRVAAECH   83 (429)
Q Consensus         8 ~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~----~~l~~~~~~~i~~qil~aL~~lH   83 (429)
                      .++|+|++.+++++......+..      ...|+|||||.||+|.+++.....    ..+++..+..++.||+.||.|||
T Consensus        81 ~l~h~~iv~~~~~~~~~~~~~~~------~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH  154 (323)
T 3qup_A           81 EFDHPHVAKLVGVSLRSRAKGRL------PIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLS  154 (323)
T ss_dssp             TCCCTTBCCCCEEEECC-------------CEEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HCCCCceehhhceeeccccccCC------CccEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHH
Confidence            44566665555544432111111      112689999999999999965532    25999999999999999999999


Q ss_pred             HCCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc---ccccccCCcccccccccC-CCCCCcchHHHHHHHHH
Q 014171           84 LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYI  159 (429)
Q Consensus        84 ~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~  159 (429)
                      ++||+||||||+||+++   .++.+||+|||++........   .....+++.|+|||.+.+ .++.++||||+||++|+
T Consensus       155 ~~~ivH~Dikp~NIli~---~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e  231 (323)
T 3qup_A          155 SRNFIHRDLAARNCMLA---EDMTVCVADFGLSRKIYSGDYYRQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWE  231 (323)
T ss_dssp             HTTCCCSCCSGGGEEEC---TTSCEEECCCCC-----------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred             cCCcccCCCCcceEEEc---CCCCEEEeeccccccccccccccccccccCcccccCchhhcCCCCCCccchhhHHHHHHH
Confidence            99999999999999998   578999999999986644322   123356778999999865 46889999999999999


Q ss_pred             Hhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCC-------HHHHhCCCccccCC
Q 014171          160 LLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT-------AAQALSHPWVREGG  229 (429)
Q Consensus       160 l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s-------~~e~l~h~~~~~~~  229 (429)
                      |++ |..||.+.........+.......   ..+.+++.+.++|.+||+.||.+|||       .+++++|+|+....
T Consensus       232 ll~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~~~~~~~~~  306 (323)
T 3qup_A          232 IMTRGQTPYAGIENAEIYNYLIGGNRLK---QPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILGHLSVLSTS  306 (323)
T ss_dssp             HHTTSCCTTTTCCGGGHHHHHHTTCCCC---CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHC-------
T ss_pred             HHhCCCCCccccChHHHHHHHhcCCCCC---CCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHHhhhcCCC
Confidence            999 999999988888888777665322   23468999999999999999999999       67788999998754

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=100.00  E-value=6.4e-34  Score=275.95  Aligned_cols=178  Identities=22%  Similarity=0.280  Sum_probs=150.9

Q ss_pred             cceeEeeecCCCChHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecC
Q 014171           38 RKLRRIRLCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK  103 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~  103 (429)
                      ..|+|||||.||+|.+++...+              ...+++..+..++.||+.||.|||++||+||||||+||+++   
T Consensus       161 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~---  237 (370)
T 2psq_A          161 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---  237 (370)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---
T ss_pred             CEEEEEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEEC---
Confidence            4578999999999999997653              23589999999999999999999999999999999999998   


Q ss_pred             CCCCEEEeecccceeccCCCc---ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHH
Q 014171          104 EDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE  178 (429)
Q Consensus       104 ~~~~~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~  178 (429)
                      .++.+||+|||++........   .....+++.|+|||++.+ .++.++||||+||++|+|++ |..||.+....+....
T Consensus       238 ~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~  317 (370)
T 2psq_A          238 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL  317 (370)
T ss_dssp             TTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHH
T ss_pred             CCCCEEEccccCCcccCcccceecccCCCcccceECHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHH
Confidence            578999999999987654322   233456789999998864 46889999999999999999 9999999888888777


Q ss_pred             HHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          179 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       179 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      +..+...   .....++..+.++|.+||+.||.+|||+.++++
T Consensus       318 ~~~~~~~---~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~  357 (370)
T 2psq_A          318 LKEGHRM---DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVE  357 (370)
T ss_dssp             HHTTCCC---CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HhcCCCC---CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            7665432   223468999999999999999999999999985

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=100.00  E-value=6.3e-34  Score=274.15  Aligned_cols=187  Identities=28%  Similarity=0.443  Sum_probs=150.9

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||. |+|.+++..   +.+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++.
T Consensus        88 ~~~lv~e~~~-~~L~~~~~~---~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~---~~~~~kl~Dfg~a~  160 (353)
T 2b9h_A           88 EVYIIQELMQ-TDLHRVIST---QMLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLIN---SNCDLKVCDFGLAR  160 (353)
T ss_dssp             CEEEEECCCS-EEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TTCCEEECCCTTCE
T ss_pred             eEEEEEeccC-ccHHHHHhh---cCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEc---CCCcEEEEeccccc
Confidence            3468999998 689988854   4799999999999999999999999999999999999998   57889999999998


Q ss_pred             eccCCCc-----------ccccccCCccccccccc--CCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcC-
Q 014171          118 FIKPGKK-----------FQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK-  183 (429)
Q Consensus       118 ~~~~~~~-----------~~~~~g~~~y~aPE~~~--~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~-  183 (429)
                      .......           .....||+.|+|||++.  ..++.++||||+||++|+|++|+.||.+.+.......+.... 
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~  240 (353)
T 2b9h_A          161 IIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIG  240 (353)
T ss_dssp             ECC----------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHC
T ss_pred             ccccccccccCccccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhC
Confidence            7643211           12347899999999875  356889999999999999999999998887665554443211 


Q ss_pred             -----------------------CCCCCC----CCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCC
Q 014171          184 -----------------------PDFRRK----PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA  231 (429)
Q Consensus       184 -----------------------~~~~~~----~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~  231 (429)
                                             +..+..    .++.+++++.+||.+||+.||.+|||++++++||||+.....
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~~~~~~~~  315 (353)
T 2b9h_A          241 TPHSDNDLRCIESPRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAKEALEHPYLQTYHDP  315 (353)
T ss_dssp             CCCSTTTTTTCCCHHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTTCCT
T ss_pred             CCchhccccccccchhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHHHHhcCccccccCCc
Confidence                                   111111    124688999999999999999999999999999999986543

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=100.00  E-value=5.1e-34  Score=274.97  Aligned_cols=181  Identities=31%  Similarity=0.482  Sum_probs=146.7

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|||||. |+|.+++    ...+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++..
T Consensus       104 ~~lv~e~~~-~~l~~~~----~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~---~~~~~kl~Dfg~~~~  175 (353)
T 3coi_A          104 FYLVMPFMQ-TDLQKIM----GLKFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN---EDCELKILDFGLARH  175 (353)
T ss_dssp             CEEEEECCS-EEGGGTT----TSCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEEC---TTCCEEECSTTCTTC
T ss_pred             EEEEecccc-CCHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeEC---CCCcEEEeecccccC
Confidence            478999998 6887766    24599999999999999999999999999999999999998   578999999999976


Q ss_pred             ccCCCcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcC-------------
Q 014171          119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK-------------  183 (429)
Q Consensus       119 ~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~-------------  183 (429)
                      ....  .....||+.|+|||++.+  .++.++||||+||++|+|++|+.||.+.+.......+....             
T Consensus       176 ~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  253 (353)
T 3coi_A          176 ADAE--MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEFVQKLND  253 (353)
T ss_dssp             ----------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSC
T ss_pred             CCCC--ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhh
Confidence            5432  334578999999999865  46889999999999999999999998887766655543310             


Q ss_pred             ----------CCCC----CCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          184 ----------PDFR----RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       184 ----------~~~~----~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                                +..+    ...++.+++.+.+||.+||+.||.+|||++++++||||+...
T Consensus       254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~e~l~hp~f~~~~  313 (353)
T 3coi_A          254 KAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFEPFR  313 (353)
T ss_dssp             HHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHHHHHTSGGGTTTC
T ss_pred             HHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHHHHhcCcchhhcc
Confidence                      1111    122346789999999999999999999999999999998654

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=100.00  E-value=2.9e-34  Score=272.31  Aligned_cols=185  Identities=25%  Similarity=0.414  Sum_probs=142.5

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~-~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ..|+||||| ++ +...+.......+++..+..++.||+.||.|||++ ||+||||||+||+++   .++.+||+|||++
T Consensus        98 ~~~lv~e~~-~~-~~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~---~~~~~kl~dfg~~  172 (318)
T 2dyl_A           98 DVFIAMELM-GT-CAEKLKKRMQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLD---ERGQIKLCDFGIS  172 (318)
T ss_dssp             EEEEEECCC-SE-EHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEEC---TTSCEEECCCTTC
T ss_pred             cEEEEEecc-CC-cHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEEC---CCCCEEEEECCCc
Confidence            357899999 44 44455444457899999999999999999999995 999999999999998   5789999999999


Q ss_pred             eeccCCCcccccccCCccccccccc------CCCCCCcchHHHHHHHHHHhhCCCCCCCC-ChhHHHHHHHhcCCCCCCC
Q 014171          117 DFIKPGKKFQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDK-TEDGIFKEVLRNKPDFRRK  189 (429)
Q Consensus       117 ~~~~~~~~~~~~~g~~~y~aPE~~~------~~~~~~~DiwslG~il~~l~~g~~pf~~~-~~~~~~~~i~~~~~~~~~~  189 (429)
                      .............|++.|+|||++.      ..++.++||||+||++|+|++|+.||... ........+........ +
T Consensus       173 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~-~  251 (318)
T 2dyl_A          173 GRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVLQEEPPLL-P  251 (318)
T ss_dssp             --------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHHSCCCCC-C
T ss_pred             hhccCCccccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHhccCCCCC-C
Confidence            8766555555667999999999984      34578999999999999999999999874 44555666665543322 2


Q ss_pred             CCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          190 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       190 ~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      ....++..+.++|.+||+.||.+|||++++++||||+..
T Consensus       252 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~h~~~~~~  290 (318)
T 2dyl_A          252 GHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKRY  290 (318)
T ss_dssp             SSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTTSHHHHHH
T ss_pred             ccCCCCHHHHHHHHHHccCChhHCcCHHHHhhCHHHHhc
Confidence            234689999999999999999999999999999999865

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=100.00  E-value=1.5e-34  Score=280.55  Aligned_cols=191  Identities=23%  Similarity=0.360  Sum_probs=147.8

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC-CCeecCCCCCcEEEeecC---CCCCEEEeecc
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAK---EDSSLKATDFG  114 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~-~i~H~dikp~Nil~~~~~---~~~~~kL~Dfg  114 (429)
                      .++||||+ ||+|.+++.......+++..+..++.||+.||.|||++ ||+||||||+||+++..+   ..+.+||+|||
T Consensus       105 ~~lv~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg  183 (373)
T 1q8y_A          105 VVMVFEVL-GENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLG  183 (373)
T ss_dssp             EEEEECCC-CEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCT
T ss_pred             EEEEEecC-CCCHHHHHHHhhccCCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEcccc
Confidence            46899999 89999999876667799999999999999999999998 999999999999996421   33479999999


Q ss_pred             cceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCCh------hHHHHHHHhcCCCCC
Q 014171          115 LSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE------DGIFKEVLRNKPDFR  187 (429)
Q Consensus       115 ~a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~------~~~~~~i~~~~~~~~  187 (429)
                      ++......  .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+...      ......+.......+
T Consensus       184 ~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p  261 (373)
T 1q8y_A          184 NACWYDEH--YTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELP  261 (373)
T ss_dssp             TCEETTBC--CCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCC
T ss_pred             cccccCCC--CCCCCCCccccCcHHHhCCCCCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCC
Confidence            99876532  234578999999999875 468999999999999999999999976542      222222221110000


Q ss_pred             C--------------------------------------CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          188 R--------------------------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       188 ~--------------------------------------~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      .                                      ...+.++.++.+||.+||+.||.+|||++++++||||++..
T Consensus       262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~hp~f~~~~  341 (373)
T 1q8y_A          262 SYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL  341 (373)
T ss_dssp             HHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred             HHHHhccchhhhhcCCcchhcccccccccchhhhhhhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhhChhhhccc
Confidence            0                                      00123456789999999999999999999999999999865


Q ss_pred             CCC
Q 014171          230 DAS  232 (429)
Q Consensus       230 ~~~  232 (429)
                      ...
T Consensus       342 ~~~  344 (373)
T 1q8y_A          342 GME  344 (373)
T ss_dssp             TCT
T ss_pred             Ccc
Confidence            443

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=100.00  E-value=8.1e-34  Score=268.48  Aligned_cols=185  Identities=20%  Similarity=0.294  Sum_probs=144.8

Q ss_pred             cceeEeeecCCCChHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCcEEEeecCCCCCEEEeecc
Q 014171           38 RKLRRIRLCEGGELLDRILAKKD-SRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFG  114 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~qil~aL~~lH~~~--i~H~dikp~Nil~~~~~~~~~~kL~Dfg  114 (429)
                      ..|+|||||.||+|.+++..... ..+++..+..++.||+.||.|||++|  |+||||||+||+++   .++.+||+|||
T Consensus       108 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~---~~~~~kL~Dfg  184 (309)
T 3p86_A          108 NLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVD---KKYTVKVCDFG  184 (309)
T ss_dssp             CCEEEEECCTTCBHHHHHHSTTHHHHSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEEC---TTCCEEECCCC
T ss_pred             ceEEEEecCCCCcHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEe---CCCcEEECCCC
Confidence            35789999999999999965421 23999999999999999999999999  99999999999998   57899999999


Q ss_pred             cceeccCCC-cccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCC
Q 014171          115 LSDFIKPGK-KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP  192 (429)
Q Consensus       115 ~a~~~~~~~-~~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  192 (429)
                      ++....... ......||+.|+|||++.+. ++.++||||+||++|+|++|+.||.+.+.......+........  ...
T Consensus       185 ~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~--~~~  262 (309)
T 3p86_A          185 LSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVGFKCKRLE--IPR  262 (309)
T ss_dssp             -----------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHHSCCCCC--CCT
T ss_pred             CCccccccccccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhcCCCCC--CCc
Confidence            997554332 23456789999999998754 58899999999999999999999998888877776654443322  234


Q ss_pred             CCCHHHHHHHHHhccCCccCcCCHHHHhC--CCcccc
Q 014171          193 SISNSAKDFVKKLLVKDPRARLTAAQALS--HPWVRE  227 (429)
Q Consensus       193 ~~~~~~~~li~~~l~~dp~~R~s~~e~l~--h~~~~~  227 (429)
                      .+++.+.+||.+||+.||.+|||++++++  .++++.
T Consensus       263 ~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~  299 (309)
T 3p86_A          263 NLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS  299 (309)
T ss_dssp             TSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred             cCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence            68999999999999999999999999986  455544

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=100.00  E-value=2e-34  Score=268.30  Aligned_cols=186  Identities=25%  Similarity=0.426  Sum_probs=156.2

Q ss_pred             cceeEeeecCCCChHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCC-----CeecCCCCCcEEEeecCCCCCEEE
Q 014171           38 RKLRRIRLCEGGELLDRILAKK--DSRYTEKDAAVVVRQMLRVAAECHLHG-----LVHRDMKPENFLFKSAKEDSSLKA  110 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~lH~~~-----i~H~dikp~Nil~~~~~~~~~~kL  110 (429)
                      ..|+|||||+||+|.+++....  ...+++..+..++.|++.||.|||++|     |+||||||+||+++   .++.+||
T Consensus        81 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~---~~~~~kl  157 (279)
T 2w5a_A           81 TLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD---GKQNVKL  157 (279)
T ss_dssp             EEEEEEECCTTEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEEC---SSSCEEE
T ss_pred             eEEEEEeCCCCCCHHHHHHhhcccCCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEc---CCCCEEE
Confidence            3578999999999999996542  345999999999999999999999999     99999999999998   5788999


Q ss_pred             eecccceeccCCCc-ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCC
Q 014171          111 TDFGLSDFIKPGKK-FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR  188 (429)
Q Consensus       111 ~Dfg~a~~~~~~~~-~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~  188 (429)
                      +|||.+........ .....|++.|+|||++.+ .++.++||||+|+++|+|++|+.||...+.......+..+....  
T Consensus       158 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~--  235 (279)
T 2w5a_A          158 GDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR--  235 (279)
T ss_dssp             CCCCHHHHC---CHHHHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCC--
T ss_pred             ecCchheeeccccccccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhccccc--
Confidence            99999876643322 234578999999999865 45889999999999999999999999888877777777765422  


Q ss_pred             CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          189 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       189 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                       ....++.++.++|.+||+.||.+|||+.++++|+|+....
T Consensus       236 -~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~~~~  275 (279)
T 2w5a_A          236 -IPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLILEHH  275 (279)
T ss_dssp             -CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCCGGG
T ss_pred             -CCcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhhhhc
Confidence             2246799999999999999999999999999999998753

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=100.00  E-value=2.8e-34  Score=269.71  Aligned_cols=184  Identities=23%  Similarity=0.369  Sum_probs=147.2

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||+||+|.+++...  +.+++..+..++.|++.||.|||++||+||||||+||+++   .++.+||+|||++.
T Consensus        85 ~~~lv~e~~~g~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~---~~~~~kl~Dfg~~~  159 (294)
T 4eqm_A           85 CYYLVMEYIEGPTLSEYIESH--GPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILID---SNKTLKIFDFGIAK  159 (294)
T ss_dssp             EEEEEEECCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEECCCSSST
T ss_pred             eEEEEEeCCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEC---CCCCEEEEeCCCcc
Confidence            357899999999999999665  5799999999999999999999999999999999999998   57899999999997


Q ss_pred             eccCCC--cccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCC-CCCCCCCC
Q 014171          118 FIKPGK--KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPD-FRRKPWPS  193 (429)
Q Consensus       118 ~~~~~~--~~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~-~~~~~~~~  193 (429)
                      ......  ......||+.|+|||.+.+. ++.++||||+|+++|+|++|+.||.+.+.............. ......+.
T Consensus       160 ~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (294)
T 4eqm_A          160 ALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAIKHIQDSVPNVTTDVRKD  239 (294)
T ss_dssp             TC-------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHHHHHSSCCCCHHHHSCTT
T ss_pred             ccccccccccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHhhccCCCcchhcccC
Confidence            654332  22345789999999998754 588999999999999999999999988877766555544322 22223457


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhCCCccc
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR  226 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~  226 (429)
                      +++.+.++|.+||+.||.+||+..+.+.+.|.+
T Consensus       240 ~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~  272 (294)
T 4eqm_A          240 IPQSLSNVILRATEKDKANRYKTIQEMKDDLSS  272 (294)
T ss_dssp             SCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHT
T ss_pred             CCHHHHHHHHHHhcCCHhHccccHHHHHHHHHH
Confidence            899999999999999999999655566666654

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=100.00  E-value=1.4e-33  Score=268.78  Aligned_cols=177  Identities=24%  Similarity=0.321  Sum_probs=148.1

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++... .+.+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++.
T Consensus       124 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~a~  199 (325)
T 3kul_A          124 LAMIVTEYMENGSLDTFLRTH-DGQFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVD---SNLVCKVSDFGLSR  199 (325)
T ss_dssp             CCEEEEECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCCSSCE
T ss_pred             ccEEEeeCCCCCcHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEC---CCCCEEECCCCccc
Confidence            457899999999999988544 36799999999999999999999999999999999999998   57899999999998


Q ss_pred             eccCCCc----ccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCC
Q 014171          118 FIKPGKK----FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPW  191 (429)
Q Consensus       118 ~~~~~~~----~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  191 (429)
                      .......    .....+|+.|+|||++. ..++.++||||+||++|+|++ |..||.+.........+..+...   +..
T Consensus       200 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~---~~~  276 (325)
T 3kul_A          200 VLEDDPDAAYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRL---PAP  276 (325)
T ss_dssp             ECC----CCEECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCC---CCC
T ss_pred             ccccCccceeeccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCC---CCC
Confidence            7654321    12234577899999987 456889999999999999999 99999999888888877765322   223


Q ss_pred             CCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          192 PSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       192 ~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ..+++.+.++|.+||..||.+|||+.++++
T Consensus       277 ~~~~~~l~~li~~~l~~dp~~Rps~~eil~  306 (325)
T 3kul_A          277 MGCPHALHQLMLDCWHKDRAQRPRFSQIVS  306 (325)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCcCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            468999999999999999999999999874

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=100.00  E-value=3.8e-34  Score=269.45  Aligned_cols=176  Identities=31%  Similarity=0.613  Sum_probs=139.0

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|||||.||+|.+++....+..+++..+..++.||+.||.|||++||+||||||+||+++....++.+||+|||++..
T Consensus        90 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~  169 (299)
T 3m2w_A           90 LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE  169 (299)
T ss_dssp             EEEEECCCCSCBHHHHHHHCTTCCCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEE
T ss_pred             EEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccccc
Confidence            46899999999999999877666899999999999999999999999999999999999999644478899999999865


Q ss_pred             ccCCCcccccccCCcccccccccCCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHH----hcCCCCCCCCCCCC
Q 014171          119 IKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL----RNKPDFRRKPWPSI  194 (429)
Q Consensus       119 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~----~~~~~~~~~~~~~~  194 (429)
                      ...                    ..++.++||||+||++|+|++|+.||.+.........+.    .....++...+..+
T Consensus       170 ~~~--------------------~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (299)
T 3m2w_A          170 TTG--------------------EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEV  229 (299)
T ss_dssp             CTT--------------------CGGGGHHHHHHHHHHHHHHHHSSCSCCC-------CCSCCSSCTTCCSSCHHHHTTS
T ss_pred             ccc--------------------ccCCchhhHHHHHHHHHHHHHCCCCCCCCcchhhhHHHHHHHhhccccCCchhcccC
Confidence            431                    234678999999999999999999997765443321111    11111222222468


Q ss_pred             CHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCCCCC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI  234 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~~~~  234 (429)
                      +++++++|.+||+.||.+|||+.++++||||+........
T Consensus       230 ~~~~~~li~~~l~~dP~~Rps~~e~l~hp~~~~~~~~~~~  269 (299)
T 3m2w_A          230 SEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQT  269 (299)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHTGGGSCCC
T ss_pred             CHHHHHHHHHHcccChhhCCCHHHHhcChhhcccccCCCC
Confidence            9999999999999999999999999999999986544433

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=1.1e-33  Score=262.04  Aligned_cols=178  Identities=18%  Similarity=0.312  Sum_probs=150.7

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||+||+|.+++... .+.+++..+..++.|++.||.|||++||+||||||+||+++   .++.+||+|||++.
T Consensus        79 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~---~~~~~kl~Dfg~~~  154 (269)
T 4hcu_A           79 PICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG---ENQVIKVSDFGMTR  154 (269)
T ss_dssp             SEEEEEECCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---GGGCEEECCTTGGG
T ss_pred             ceEEEEEeCCCCcHHHHHHhc-CcccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEc---CCCCEEeccccccc
Confidence            357899999999999998654 35799999999999999999999999999999999999998   46789999999997


Q ss_pred             eccCCC--cccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          118 FIKPGK--KFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       118 ~~~~~~--~~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      ......  ......+++.|+|||++. ..++.++||||+|+++|+|++ |+.||.+.........+........   ...
T Consensus       155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~  231 (269)
T 4hcu_A          155 FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK---PRL  231 (269)
T ss_dssp             GBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCC---CTT
T ss_pred             cccccccccccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCCC---CCc
Confidence            654322  123345677899999987 456889999999999999999 9999999888888887776643322   245


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      +++.+.+++.+||+.||.+|||+.+++++
T Consensus       232 ~~~~~~~li~~~l~~~p~~Rps~~~ll~~  260 (269)
T 4hcu_A          232 ASTHVYQIMNHCWRERPEDRPAFSRLLRQ  260 (269)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCHHHHHHHHHHccCCcccCcCHHHHHHH
Confidence            79999999999999999999999999864

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=100.00  E-value=2.2e-33  Score=273.46  Aligned_cols=179  Identities=23%  Similarity=0.286  Sum_probs=151.9

Q ss_pred             cceeEeeecCCCChHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecC
Q 014171           38 RKLRRIRLCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK  103 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~  103 (429)
                      ..|+|||||.||+|.+++....              ...+++..+..++.||+.||.|||++||+||||||+||+++   
T Consensus       149 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---  225 (382)
T 3tt0_A          149 PLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVT---  225 (382)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---
T ss_pred             ceEEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEc---
Confidence            3578999999999999997654              24599999999999999999999999999999999999998   


Q ss_pred             CCCCEEEeecccceeccCCC---cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHH
Q 014171          104 EDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE  178 (429)
Q Consensus       104 ~~~~~kL~Dfg~a~~~~~~~---~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~  178 (429)
                      .++.+||+|||+|.......   ......+++.|+|||++.+ .++.++||||+||++|+|++ |..||.+.........
T Consensus       226 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~  305 (382)
T 3tt0_A          226 EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL  305 (382)
T ss_dssp             TTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH
T ss_pred             CCCcEEEcccCcccccccccccccccCCCCCcceeCHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHH
Confidence            57899999999998665432   2233456789999999865 45889999999999999999 9999998888887777


Q ss_pred             HHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          179 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       179 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      +..+....   ....+++++.+||.+||+.||.+|||+.+++++
T Consensus       306 ~~~~~~~~---~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  346 (382)
T 3tt0_A          306 LKEGHRMD---KPSNCTNELYMMMRDCWHAVPSQRPTFKQLVED  346 (382)
T ss_dssp             HHTTCCCC---CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHcCCCCC---CCccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            76654322   234689999999999999999999999999864

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=100.00  E-value=1.9e-33  Score=260.29  Aligned_cols=177  Identities=21%  Similarity=0.301  Sum_probs=150.9

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|||||+||+|.+++... +..+++..+..++.|++.||.|||++||+||||||+||+++   .++.++|+|||.+..
T Consensus        78 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~---~~~~~~l~Dfg~~~~  153 (268)
T 3sxs_A           78 IYIVTEYISNGCLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVD---RDLCVKVSDFGMTRY  153 (268)
T ss_dssp             EEEEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEEC---TTCCEEECCTTCEEE
T ss_pred             eEEEEEccCCCcHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEEC---CCCCEEEccCcccee
Confidence            46899999999999999665 34699999999999999999999999999999999999998   578999999999987


Q ss_pred             ccCCCcc--cccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          119 IKPGKKF--QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       119 ~~~~~~~--~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      .......  ....+++.|+|||++.+ .++.++||||+|+++|+|++ |+.||...........+........+   ...
T Consensus       154 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---~~~  230 (268)
T 3sxs_A          154 VLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRP---HLA  230 (268)
T ss_dssp             CCTTCEEECCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCC---TTS
T ss_pred             cchhhhhcccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCC---CcC
Confidence            6544322  23345678999999875 56889999999999999999 99999988888887777766543332   357


Q ss_pred             CHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      ++.+.++|.+||+.||.+|||+.+++++
T Consensus       231 ~~~l~~li~~~l~~~p~~Rps~~~ll~~  258 (268)
T 3sxs_A          231 SDTIYQIMYSCWHELPEKRPTFQQLLSS  258 (268)
T ss_dssp             CHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             hHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            8999999999999999999999999865

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=100.00  E-value=2e-33  Score=266.06  Aligned_cols=179  Identities=21%  Similarity=0.224  Sum_probs=151.0

Q ss_pred             cceeEeeecCCCChHHHHHhhcC----------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCC
Q 014171           38 RKLRRIRLCEGGELLDRILAKKD----------------------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPE   95 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~----------------------~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~   95 (429)
                      ..|+|||||.||+|.+++.....                      ..+++..+..++.||+.||.|||++||+||||||+
T Consensus       100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~  179 (314)
T 2ivs_A          100 PLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAAR  179 (314)
T ss_dssp             SCEEEEECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGG
T ss_pred             ceEEEEeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchh
Confidence            45789999999999999976532                      34899999999999999999999999999999999


Q ss_pred             cEEEeecCCCCCEEEeecccceeccCCCc---ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCC
Q 014171           96 NFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDK  170 (429)
Q Consensus        96 Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~  170 (429)
                      ||+++   .++.+||+|||++........   .....+++.|+|||++.+ .++.++||||+||++|+|++ |..||.+.
T Consensus       180 NIli~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~  256 (314)
T 2ivs_A          180 NILVA---EGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGI  256 (314)
T ss_dssp             GEEEE---TTTEEEECCCTTCEECTTTSCEECSSCCCSCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred             eEEEc---CCCCEEEccccccccccccccceeccCCCCcccccChhhhcCCCcCchhhHHHHHHHHHHHHhCCCCCCCCC
Confidence            99999   578899999999987654322   223456788999998864 45889999999999999999 99999988


Q ss_pred             ChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          171 TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       171 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      ........+......   .....+++.+.++|.+||+.||.+|||+.+++++
T Consensus       257 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~li~~~l~~dp~~Rps~~~l~~~  305 (314)
T 2ivs_A          257 PPERLFNLLKTGHRM---ERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKD  305 (314)
T ss_dssp             CGGGHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CHHHHHHHhhcCCcC---CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            888877776655422   2235689999999999999999999999999854

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=100.00  E-value=9.4e-34  Score=264.24  Aligned_cols=177  Identities=22%  Similarity=0.311  Sum_probs=140.5

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.+|+|.+++... ...+++..+..++.|++.||.|||++||+||||||+||+++.   ++.+||+|||++.
T Consensus        89 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~---~~~~kl~Dfg~~~  164 (281)
T 1mp8_A           89 PVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSR  164 (281)
T ss_dssp             SCEEEEECCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE---TTEEEECC-----
T ss_pred             ccEEEEecCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECC---CCCEEECcccccc
Confidence            357899999999999998654 357999999999999999999999999999999999999994   7889999999998


Q ss_pred             eccCCCc--ccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          118 FIKPGKK--FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       118 ~~~~~~~--~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      .......  .....+++.|+|||++. ..++.++||||+|+++|+|++ |..||.+.........+......   +..+.
T Consensus       165 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~---~~~~~  241 (281)
T 1mp8_A          165 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL---PMPPN  241 (281)
T ss_dssp             --------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC---CCCTT
T ss_pred             ccCcccccccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCC---CCCCC
Confidence            7654332  22335678899999986 456889999999999999996 99999988888888777765432   23356


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      +++.+.++|.+||..||.+|||+.++++
T Consensus       242 ~~~~l~~li~~~l~~~p~~Rps~~~l~~  269 (281)
T 1mp8_A          242 CPPTLYSLMTKCWAYDPSRRPRFTELKA  269 (281)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            8999999999999999999999999874

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=100.00  E-value=3.1e-34  Score=273.44  Aligned_cols=208  Identities=21%  Similarity=0.288  Sum_probs=141.5

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHh---hcCCCCCHHHHHHHHHHHHHHHHHH
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILA---KKDSRYTEKDAAVVVRQMLRVAAEC   82 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~---~~~~~l~~~~~~~i~~qil~aL~~l   82 (429)
                      ++..+|+|++++++.+..            +...|+|||||.| +|.+++..   .....+++..+..++.|++.||.||
T Consensus        75 ~~~~~h~niv~~~~~~~~------------~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~l  141 (327)
T 3aln_A           75 MRSSDCPYIVQFYGALFR------------EGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHL  141 (327)
T ss_dssp             HSSCCCTTBCCEEEEEEC------------SSEEEEEECCCSE-EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHH
T ss_pred             HHcCCCCcEeeeeeEEEe------------CCceEEEEeecCC-ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHH
Confidence            344556666665554432            2345689999985 78777753   2356899999999999999999999


Q ss_pred             HHC-CCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCccccccccc-----CCCCCCcchHHHHHH
Q 014171           83 HLH-GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-----RKSGPESDVWSIGVI  156 (429)
Q Consensus        83 H~~-~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~DiwslG~i  156 (429)
                      |++ ||+||||||+||+++   .++.+||+|||++.............|++.|+|||++.     ..++.++||||+||+
T Consensus       142 H~~~~ivH~dlkp~NIll~---~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~i  218 (327)
T 3aln_A          142 KENLKIIHRDIKPSNILLD---RSGNIKLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGIT  218 (327)
T ss_dssp             HHHHSCCCSCCCGGGEEEE---TTTEEEECCCSSSCC------------------------------CCSHHHHHHHHHH
T ss_pred             hccCCEeECCCCHHHEEEc---CCCCEEEccCCCceecccccccccCCCCccccCceeeccccCcCCCCchhhHHHHHHH
Confidence            999 999999999999998   57899999999998776554445557999999999983     346889999999999


Q ss_pred             HHHHhhCCCCCCCCChh-HHHHHHHhcC-CCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          157 TYILLCGRRPFWDKTED-GIFKEVLRNK-PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       157 l~~l~~g~~pf~~~~~~-~~~~~i~~~~-~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      +|+|++|+.||.+.... .....+..+. +.++......+++.+.+||.+||+.||.+|||+.++++||||....
T Consensus       219 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~hp~~~~~~  293 (327)
T 3aln_A          219 LYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYE  293 (327)
T ss_dssp             HHHHHHSCCCSSCC-------CCCCCSCCCCCCCCSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHHH
T ss_pred             HHHHHHCCCCCCCcchHHHHHHHHhcCCCCCCCCcccccCCHHHHHHHHHHhhCChhhCcCHHHHHhChHHHHhH
Confidence            99999999999764322 1222222221 1222223346899999999999999999999999999999998653

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=100.00  E-value=6.6e-34  Score=281.11  Aligned_cols=186  Identities=24%  Similarity=0.403  Sum_probs=139.8

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecC--CCCCEEEeecccc
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK--EDSSLKATDFGLS  116 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~--~~~~~kL~Dfg~a  116 (429)
                      .|+|||||. |+|.+++.... ..+++..+..++.||+.||.|||++||+||||||+||+++..+  ....+||+|||+|
T Consensus        93 ~~lv~E~~~-g~L~~~l~~~~-~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a  170 (432)
T 3p23_A           93 QYIAIELCA-ATLQEYVEQKD-FAHLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLC  170 (432)
T ss_dssp             EEEEEECCS-EEHHHHHHSSS-CCCCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEE
T ss_pred             EEEEEECCC-CCHHHHHHhcC-CCccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccce
Confidence            478999997 69999886553 4466667789999999999999999999999999999996422  2346789999999


Q ss_pred             eeccCCC----cccccccCCcccccccccC----CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCC
Q 014171          117 DFIKPGK----KFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFR  187 (429)
Q Consensus       117 ~~~~~~~----~~~~~~g~~~y~aPE~~~~----~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~  187 (429)
                      .......    ......||+.|+|||++.+    .++.++||||+||++|+|++ |..||.........  +........
T Consensus       171 ~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~~~~~~--~~~~~~~~~  248 (432)
T 3p23_A          171 KKLAVGRHSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQAN--ILLGACSLD  248 (432)
T ss_dssp             ECC------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTTTHHHH--HHTTCCCCT
T ss_pred             eeccCCCcceeeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhhHHHHH--HHhccCCcc
Confidence            8765332    2345679999999999863    34678999999999999999 88998654433322  222222221


Q ss_pred             C-CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          188 R-KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       188 ~-~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      . ......+..+++||.+||+.||.+|||++++++||||...
T Consensus       249 ~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~hp~f~~~  290 (432)
T 3p23_A          249 CLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLKHPFFWSL  290 (432)
T ss_dssp             TSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHTSTTTCCH
T ss_pred             ccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHhCccccCh
Confidence            1 1112235668999999999999999999999999999763

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=100.00  E-value=2.3e-33  Score=262.28  Aligned_cols=178  Identities=19%  Similarity=0.280  Sum_probs=144.5

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCcEEEeecC--CCCCEEEeecc
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAK--EDSSLKATDFG  114 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~--i~H~dikp~Nil~~~~~--~~~~~kL~Dfg  114 (429)
                      .++|||||.||+|.+++.+. ...+++..+..++.|++.||.|||++|  |+||||||+||+++..+  ....+||+|||
T Consensus        96 ~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg  174 (287)
T 4f0f_A           96 PRMVMEFVPCGDLYHRLLDK-AHPIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFG  174 (287)
T ss_dssp             TEEEEECCTTCBHHHHHHCT-TSCCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCT
T ss_pred             CeEEEEecCCCCHHHHHhcc-cCCccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCC
Confidence            36899999999999988654 357999999999999999999999999  99999999999998422  12239999999


Q ss_pred             cceeccCCCcccccccCCcccccccccC---CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHH--HHHHHhcCCCCCCC
Q 014171          115 LSDFIKPGKKFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTEDGI--FKEVLRNKPDFRRK  189 (429)
Q Consensus       115 ~a~~~~~~~~~~~~~g~~~y~aPE~~~~---~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~--~~~i~~~~~~~~~~  189 (429)
                      ++.....  ......|++.|+|||++.+   .++.++||||+||++|+|++|+.||........  ...+.....  ...
T Consensus       175 ~~~~~~~--~~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~--~~~  250 (287)
T 4f0f_A          175 LSQQSVH--SVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGL--RPT  250 (287)
T ss_dssp             TCBCCSS--CEECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHHHHHHHSSCTTTTCCCCHHHHHHHHHHSCC--CCC
T ss_pred             ccccccc--cccccCCCccccCchhhccCCCCcCchhhHHHHHHHHHHHHcCCCCCccccccHHHHHHHHhccCC--CCC
Confidence            9975433  3345678999999999842   347899999999999999999999987665444  333333332  233


Q ss_pred             CCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          190 PWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       190 ~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ....+++.+.++|.+||+.||.+|||++++++
T Consensus       251 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  282 (287)
T 4f0f_A          251 IPEDCPPRLRNVIELCWSGDPKKRPHFSYIVK  282 (287)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCcccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            34578999999999999999999999999874

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=100.00  E-value=8.5e-34  Score=270.30  Aligned_cols=178  Identities=20%  Similarity=0.242  Sum_probs=148.6

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..++|||||.+|+|.+++... .+.+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||+++
T Consensus        88 ~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~---~~~~~kl~Dfg~a~  163 (325)
T 3kex_A           88 SLQLVTQYLPLGSLLDHVRQH-RGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLK---SPSQVQVADFGVAD  163 (325)
T ss_dssp             SEEEEEECCTTCBSHHHHHSS-GGGSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEES---SSSCEEECSCSGGG
T ss_pred             ccEEEEEeCCCCCHHHHHHHc-cccCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEEC---CCCeEEECCCCccc
Confidence            356899999999999998654 35799999999999999999999999999999999999998   47889999999998


Q ss_pred             eccCCC---cccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCC
Q 014171          118 FIKPGK---KFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWP  192 (429)
Q Consensus       118 ~~~~~~---~~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  192 (429)
                      ......   ......+++.|+|||++. +.++.++||||+||++|+|++ |..||.+.........+........   ..
T Consensus       164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~---~~  240 (325)
T 3kex_A          164 LLPPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQ---PQ  240 (325)
T ss_dssp             GSCCCTTCCC-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCC---CT
T ss_pred             ccCcccccccccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCC---CC
Confidence            764432   223456778999999987 456889999999999999999 9999998887777777766543222   23


Q ss_pred             CCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          193 SISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       193 ~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      .++.++.++|.+||..||.+|||+.+++++
T Consensus       241 ~~~~~~~~li~~~l~~dp~~Rps~~el~~~  270 (325)
T 3kex_A          241 ICTIDVYMVMVKCWMIDENIRPTFKELANE  270 (325)
T ss_dssp             TBCTTTTHHHHHHTCSCTTTSCCHHHHHHH
T ss_pred             cCcHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            478889999999999999999999999875

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=2.2e-33  Score=269.46  Aligned_cols=181  Identities=22%  Similarity=0.260  Sum_probs=149.8

Q ss_pred             cceeEeeecCCCChHHHHHhhcC---------------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCc
Q 014171           38 RKLRRIRLCEGGELLDRILAKKD---------------------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN   96 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~---------------------~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~N   96 (429)
                      ..|+|||||+||+|.+++.....                     ..+++..+..++.||+.||.|||++||+||||||+|
T Consensus       123 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~N  202 (344)
T 1rjb_A          123 PIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARN  202 (344)
T ss_dssp             SCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGG
T ss_pred             ccEEEEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhh
Confidence            45789999999999999976532                     238999999999999999999999999999999999


Q ss_pred             EEEeecCCCCCEEEeecccceeccCCCc---ccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh-CCCCCCCCC
Q 014171           97 FLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKT  171 (429)
Q Consensus        97 il~~~~~~~~~~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~-g~~pf~~~~  171 (429)
                      |+++   .++.+||+|||++........   .....||+.|+|||++. +.++.++||||+||++|+|++ |..||.+..
T Consensus       203 Ill~---~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~  279 (344)
T 1rjb_A          203 VLVT---HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP  279 (344)
T ss_dssp             EEEE---TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCC
T ss_pred             EEEc---CCCcEEeCCCccCcccccCccceeccCccCccCccCHHHhccCCCChhHhHHHHHHHHHHHHcCCCCCcccCC
Confidence            9998   578999999999986643332   23345678999999886 456889999999999999998 999998887


Q ss_pred             hhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCC
Q 014171          172 EDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP  223 (429)
Q Consensus       172 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~  223 (429)
                      .......+........  ....+++.+.++|.+||..||.+|||+.+++++.
T Consensus       280 ~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l  329 (344)
T 1rjb_A          280 VDANFYKLIQNGFKMD--QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL  329 (344)
T ss_dssp             CSHHHHHHHHTTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             cHHHHHHHHhcCCCCC--CCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHH
Confidence            6666655555443322  2346799999999999999999999999998754

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=100.00  E-value=3.6e-33  Score=277.63  Aligned_cols=176  Identities=22%  Similarity=0.252  Sum_probs=148.9

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.+|+|.+++.+.....+++..+..++.||+.||.|||++||+||||||+|||++   .++.+||+|||+++
T Consensus       261 ~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~---~~~~~kl~DfG~a~  337 (450)
T 1k9a_A          261 GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFGLTK  337 (450)
T ss_dssp             CEEEEEECCTTCBHHHHHHHHCTTTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TTSCEEECCCTTCE
T ss_pred             ceEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEC---CCCCEEEeeCCCcc
Confidence            357899999999999999877555689999999999999999999999999999999999998   57899999999998


Q ss_pred             eccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      ......  ....+++.|+|||++.+ .++.++||||+||++|+|++ |..||.+.+..+....+..+..   ...+..++
T Consensus       338 ~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~---~~~p~~~~  412 (450)
T 1k9a_A          338 EASSTQ--DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK---MDAPDGCP  412 (450)
T ss_dssp             ECC--------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCC---CCCCTTCC
T ss_pred             cccccc--cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC---CCCCCcCC
Confidence            654322  23366889999999864 56889999999999999998 9999998888888777766532   22335689


Q ss_pred             HHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          196 NSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      +.+.++|.+||+.||.+|||+.++++
T Consensus       413 ~~l~~li~~cl~~dp~~Rpt~~~l~~  438 (450)
T 1k9a_A          413 PAVYDVMKNCWHLDAATRPTFLQLRE  438 (450)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            99999999999999999999999873

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=100.00  E-value=2.5e-33  Score=268.79  Aligned_cols=179  Identities=19%  Similarity=0.220  Sum_probs=150.1

Q ss_pred             ccceeEeeecCCCChHHHHHhhc----------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCC
Q 014171           37 LRKLRRIRLCEGGELLDRILAKK----------------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKP   94 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~----------------------~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp   94 (429)
                      ...|+|||||.||+|.+++....                      ...+++.++..++.||+.||.|||++||+||||||
T Consensus       123 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp  202 (343)
T 1luf_A          123 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLAT  202 (343)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             CceEEEEecCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCc
Confidence            34578999999999999997642                      15799999999999999999999999999999999


Q ss_pred             CcEEEeecCCCCCEEEeecccceeccCCC---cccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh-CCCCCCC
Q 014171           95 ENFLFKSAKEDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWD  169 (429)
Q Consensus        95 ~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~---~~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~-g~~pf~~  169 (429)
                      +||+++   .++.+||+|||++.......   ......+++.|+|||++. ..++.++||||+||++|+|++ |..||.+
T Consensus       203 ~NIl~~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~  279 (343)
T 1luf_A          203 RNCLVG---ENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG  279 (343)
T ss_dssp             GGEEEC---GGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             ceEEEC---CCCeEEEeecCCCcccccCccccccCCCcccceecChhhhccCCcCcccccHHHHHHHHHHHhcCCCcCCC
Confidence            999998   47799999999987653221   223456788999999886 456889999999999999999 9999999


Q ss_pred             CChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          170 KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       170 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ....+....+..+....   ....++..+.++|.+||+.||.+|||+.++++
T Consensus       280 ~~~~~~~~~~~~~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rps~~~~~~  328 (343)
T 1luf_A          280 MAHEEVIYYVRDGNILA---CPENCPLELYNLMRLCWSKLPADRPSFCSIHR  328 (343)
T ss_dssp             SCHHHHHHHHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CChHHHHHHHhCCCcCC---CCCCCCHHHHHHHHHHcccCcccCCCHHHHHH
Confidence            88888887777665422   23468999999999999999999999999874

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=100.00  E-value=1.4e-33  Score=272.38  Aligned_cols=155  Identities=23%  Similarity=0.282  Sum_probs=128.2

Q ss_pred             CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc---ccccccCCccccccc
Q 014171           63 YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEV  139 (429)
Q Consensus        63 l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~  139 (429)
                      +++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++........   .....||+.|+|||+
T Consensus       190 l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~---~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y~aPE~  266 (359)
T 3vhe_A          190 LTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPET  266 (359)
T ss_dssp             BCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGCEEECCCGGGSCTTSCTTCEEC--CEECGGGCCHHH
T ss_pred             cCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEc---CCCcEEEEeccceeeecccccchhccccCCCceeEChhh
Confidence            89999999999999999999999999999999999998   478899999999986643322   234567889999998


Q ss_pred             cc-CCCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHH
Q 014171          140 LK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA  217 (429)
Q Consensus       140 ~~-~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~  217 (429)
                      +. ..++.++||||+||++|+|++ |..||.+..................  ....+++++.++|.+||+.||.+|||+.
T Consensus       267 ~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dP~~Rps~~  344 (359)
T 3vhe_A          267 IFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMR--APDYTTPEMYQTMLDCWHGEPSQRPTFS  344 (359)
T ss_dssp             HHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred             hcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchhHHHHHHHHcCCCCC--CCCCCCHHHHHHHHHHccCChhhCCCHH
Confidence            86 456889999999999999998 9999988775555544444332222  2245899999999999999999999999


Q ss_pred             HHhCC
Q 014171          218 QALSH  222 (429)
Q Consensus       218 e~l~h  222 (429)
                      ++++|
T Consensus       345 ell~~  349 (359)
T 3vhe_A          345 ELVEH  349 (359)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            99865

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=100.00  E-value=3.2e-33  Score=259.01  Aligned_cols=179  Identities=25%  Similarity=0.318  Sum_probs=143.5

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---CeecCCCCCcEEEeecC-----CCCCEE
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG---LVHRDMKPENFLFKSAK-----EDSSLK  109 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~---i~H~dikp~Nil~~~~~-----~~~~~k  109 (429)
                      ..|+|||||.||+|.+++.   +..+++..+..++.|++.||.|||++|   |+||||||+||+++...     ..+.+|
T Consensus        80 ~~~lv~e~~~~~~L~~~~~---~~~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~k  156 (271)
T 3dtc_A           80 NLCLVMEFARGGPLNRVLS---GKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILK  156 (271)
T ss_dssp             -CEEEEECCTTEEHHHHHT---SSCCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEE
T ss_pred             ceEEEEEcCCCCCHHHHhh---cCCCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceE
Confidence            3578999999999998873   357999999999999999999999999   89999999999998422     157899


Q ss_pred             EeecccceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCC
Q 014171          110 ATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR  188 (429)
Q Consensus       110 L~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~  188 (429)
                      |+|||.+........ ....|++.|+|||.+.+ .++.++||||+|+++|+|++|+.||.+.........+.......+ 
T Consensus       157 l~Dfg~~~~~~~~~~-~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~-  234 (271)
T 3dtc_A          157 ITDFGLAREWHRTTK-MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALP-  234 (271)
T ss_dssp             ECCCCC--------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHHTSCCCCC-
T ss_pred             EccCCcccccccccc-cCCCCccceeCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhhhcCCCCCC-
Confidence            999999986654332 34578999999999864 468899999999999999999999998887777776666554333 


Q ss_pred             CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          189 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       189 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                       ....+++.+.++|.+||+.||.+|||+.+++++
T Consensus       235 -~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~  267 (271)
T 3dtc_A          235 -IPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQ  267 (271)
T ss_dssp             -CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             -CCcccCHHHHHHHHHHhcCCcccCcCHHHHHHH
Confidence             235689999999999999999999999999864

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=100.00  E-value=2.6e-33  Score=272.38  Aligned_cols=177  Identities=20%  Similarity=0.265  Sum_probs=147.0

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||+||+|.+++... +..+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||+++
T Consensus       186 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~---~~~~~kl~DfG~s~  261 (377)
T 3cbl_A          186 PIYIVMELVQGGDFLTFLRTE-GARLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVT---EKNVLKISDFGMSR  261 (377)
T ss_dssp             SCEEEEECCTTCBHHHHHHHH-GGGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCGGGCE
T ss_pred             CcEEEEEcCCCCCHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEc---CCCcEEECcCCCce
Confidence            357899999999999999654 34699999999999999999999999999999999999998   57899999999998


Q ss_pred             eccCCCcc---cccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCC
Q 014171          118 FIKPGKKF---QDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWP  192 (429)
Q Consensus       118 ~~~~~~~~---~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  192 (429)
                      ........   ....+++.|+|||++. +.++.++||||+||++|+|++ |..||.+.+.......+..+.. .  +...
T Consensus       262 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~-~--~~~~  338 (377)
T 3cbl_A          262 EEADGVYAASGGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGR-L--PCPE  338 (377)
T ss_dssp             ECTTSEEECCSSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCC-C--CCCT
T ss_pred             ecCCCceeecCCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC-C--CCCC
Confidence            65432211   1123467899999986 456889999999999999998 9999998887777766655432 2  2234


Q ss_pred             CCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          193 SISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       193 ~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      .+++.+.++|.+||+.||.+|||++++++
T Consensus       339 ~~~~~l~~li~~cl~~dP~~Rps~~~i~~  367 (377)
T 3cbl_A          339 LCPDAVFRLMEQCWAYEPGQRPSFSTIYQ  367 (377)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCHHHHHHHHHHcCCCchhCcCHHHHHH
Confidence            57899999999999999999999999873

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=100.00  E-value=9.5e-34  Score=269.61  Aligned_cols=202  Identities=21%  Similarity=0.257  Sum_probs=149.5

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH   85 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~   85 (429)
                      +..++|+|++.+++.+......        ....|+|||||++|+|.+++...   .+++..+..++.|++.||.|||+.
T Consensus        72 l~~l~hpniv~~~~~~~~~~~~--------~~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~al~~LH~~  140 (322)
T 3soc_A           72 LPGMKHENILQFIGAEKRGTSV--------DVDLWLITAFHEKGSLSDFLKAN---VVSWNELCHIAETMARGLAYLHED  140 (322)
T ss_dssp             STTCCCTTBCCEEEEEEEECSS--------SEEEEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHTCC
T ss_pred             HhcCCCCCchhhcceeccCCCC--------CceEEEEEecCCCCCHHHHHHhc---CCCHHHHHHHHHHHHHHHHHHHhh
Confidence            3455677776666655431110        11236899999999999999553   599999999999999999999999


Q ss_pred             ----------CCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc---ccccccCCcccccccccCC------CCC
Q 014171           86 ----------GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRK------SGP  146 (429)
Q Consensus        86 ----------~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~~~~~------~~~  146 (429)
                                ||+||||||+||+++   .++.+||+|||+|+.......   .....||+.|+|||++.+.      ++.
T Consensus       141 ~~~l~~~~~~~ivH~Dlkp~Nill~---~~~~~kL~DFg~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~  217 (322)
T 3soc_A          141 IPGLKDGHKPAISHRDIKSKNVLLK---NNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFL  217 (322)
T ss_dssp             EEEETTEEECEEECSCCSGGGEEEC---TTCCEEECCCTTCEEECTTSCCCCCTTCCCCGGGCCHHHHTTCCCCCHHHHH
T ss_pred             ccccccccCCCEEeCCCChHhEEEC---CCCeEEEccCCcccccccccCccccccCccCccccCHhhcccccccCcCCCc
Confidence                      999999999999998   578999999999987654332   2345789999999998752      356


Q ss_pred             CcchHHHHHHHHHHhhCCCCCCCCCh----------------hHHHHHHHhcCCCCCCC-CCC--CCCHHHHHHHHHhcc
Q 014171          147 ESDVWSIGVITYILLCGRRPFWDKTE----------------DGIFKEVLRNKPDFRRK-PWP--SISNSAKDFVKKLLV  207 (429)
Q Consensus       147 ~~DiwslG~il~~l~~g~~pf~~~~~----------------~~~~~~i~~~~~~~~~~-~~~--~~~~~~~~li~~~l~  207 (429)
                      ++||||+||++|+|++|+.||.+...                ......+.......... .+.  ..++++.+||.+||+
T Consensus       218 ~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~  297 (322)
T 3soc_A          218 RIDMYAMGLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWD  297 (322)
T ss_dssp             HHHHHHHHHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTC
T ss_pred             cchhHHHHHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHcc
Confidence            78999999999999999999976432                11222222222111110 000  123459999999999


Q ss_pred             CCccCcCCHHHHhC
Q 014171          208 KDPRARLTAAQALS  221 (429)
Q Consensus       208 ~dp~~R~s~~e~l~  221 (429)
                      .||.+|||+.++++
T Consensus       298 ~dP~~Rps~~ell~  311 (322)
T 3soc_A          298 HDAEARLSAGCVGE  311 (322)
T ss_dssp             SSGGGSCCHHHHHH
T ss_pred             CChhhCcCHHHHHH
Confidence            99999999999873

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=100.00  E-value=2e-33  Score=267.95  Aligned_cols=179  Identities=22%  Similarity=0.252  Sum_probs=148.5

Q ss_pred             cceeEeeecCCCChHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecC
Q 014171           38 RKLRRIRLCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK  103 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~  103 (429)
                      ..|+|||||+||+|.+++...+              ...+++..+..++.||+.||.|||++||+||||||+||+++   
T Consensus       100 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~---  176 (327)
T 1fvr_A          100 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---  176 (327)
T ss_dssp             EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---
T ss_pred             ceEEEEecCCCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEc---
Confidence            4578999999999999996542              24799999999999999999999999999999999999998   


Q ss_pred             CCCCEEEeecccceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHh
Q 014171          104 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLR  181 (429)
Q Consensus       104 ~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~  181 (429)
                      .++.+||+|||++.............+++.|+|||++.+ .++.++||||+||++|+|++ |..||.+.+.......+..
T Consensus       177 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~  256 (327)
T 1fvr_A          177 ENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ  256 (327)
T ss_dssp             GGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGG
T ss_pred             CCCeEEEcccCcCccccccccccCCCCCccccChhhhccccCCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhc
Confidence            467999999999875443333344466889999999864 45889999999999999998 9999998888777776655


Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          182 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      +..   ......+++.+.++|.+||..||.+|||+++++++
T Consensus       257 ~~~---~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  294 (327)
T 1fvr_A          257 GYR---LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  294 (327)
T ss_dssp             TCC---CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCC---CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            432   22234689999999999999999999999999864

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=100.00  E-value=2.4e-33  Score=267.29  Aligned_cols=186  Identities=19%  Similarity=0.234  Sum_probs=155.1

Q ss_pred             cceeEeeecCCCChHHHHHhhcC-----CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEee
Q 014171           38 RKLRRIRLCEGGELLDRILAKKD-----SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD  112 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~-----~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~D  112 (429)
                      ..|+|||||.||+|.+++.....     ..+++..+..++.||+.||.|||++||+||||||+||+++..+....+||+|
T Consensus       107 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~D  186 (327)
T 2yfx_A          107 PRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGD  186 (327)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECC
T ss_pred             CcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECc
Confidence            34789999999999999976532     4589999999999999999999999999999999999998655567899999


Q ss_pred             cccceeccCCC---cccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCC
Q 014171          113 FGLSDFIKPGK---KFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFR  187 (429)
Q Consensus       113 fg~a~~~~~~~---~~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~  187 (429)
                      ||++.......   ......|++.|+|||++. +.++.++||||+|+++|+|++ |..||.+.........+..+.... 
T Consensus       187 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~-  265 (327)
T 2yfx_A          187 FGMARDIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMD-  265 (327)
T ss_dssp             CHHHHHHHC------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCC-
T ss_pred             cccccccccccccccCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCCC-
Confidence            99987553322   223446788999999985 456889999999999999998 999998888877777776654322 


Q ss_pred             CCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccc
Q 014171          188 RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR  226 (429)
Q Consensus       188 ~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~  226 (429)
                        ....++..+.++|.+||+.||.+|||+.+++++.|+-
T Consensus       266 --~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~  302 (327)
T 2yfx_A          266 --PPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYC  302 (327)
T ss_dssp             --CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred             --CCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence              2346899999999999999999999999999988754

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=100.00  E-value=3.9e-33  Score=260.22  Aligned_cols=178  Identities=19%  Similarity=0.279  Sum_probs=150.8

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++... ...+++..+..++.|++.||.|||++||+||||||+||+++   .++.+||+|||.+.
T Consensus        93 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~---~~~~~kl~Dfg~~~  168 (283)
T 3gen_A           93 PIFIITEYMANGCLLNYLREM-RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVN---DQGVVKVSDFGLSR  168 (283)
T ss_dssp             SEEEEECCCTTCBHHHHHHCG-GGCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEEC---TTSCEEECSTTGGG
T ss_pred             CeEEEEeccCCCcHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEc---CCCCEEEccccccc
Confidence            357899999999999999653 25799999999999999999999999999999999999998   57899999999997


Q ss_pred             eccCCCc--ccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          118 FIKPGKK--FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       118 ~~~~~~~--~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      .......  .....+++.|+|||++. ..++.++||||+|+++|+|++ |+.||...........+........   ...
T Consensus       169 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~---~~~  245 (283)
T 3gen_A          169 YVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYR---PHL  245 (283)
T ss_dssp             GBCCHHHHSTTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCC---CTT
T ss_pred             cccccccccccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCC---CCc
Confidence            6543221  22335677899999986 456889999999999999998 9999998888888887776643332   245


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      +++.+.++|.+||+.||.+|||++++++|
T Consensus       246 ~~~~l~~li~~~l~~~p~~Rps~~~ll~~  274 (283)
T 3gen_A          246 ASEKVYTIMYSCWHEKADERPTFKILLSN  274 (283)
T ss_dssp             CCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHHHH
Confidence            78999999999999999999999999865

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=100.00  E-value=1.6e-33  Score=278.95  Aligned_cols=187  Identities=27%  Similarity=0.462  Sum_probs=138.7

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCC-----CCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeec----------C
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSR-----YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA----------K  103 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~-----l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~----------~  103 (429)
                      .|+|||||. |+|.+++.......     .++..+..++.||+.||.|||++||+||||||+||+++..          .
T Consensus        84 ~~lv~E~~~-gsL~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~  162 (434)
T 2rio_A           84 LYIALELCN-LNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGA  162 (434)
T ss_dssp             EEEEECCCS-EEHHHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCC
T ss_pred             EEEEEecCC-CCHHHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCC
Confidence            468999996 69999996542111     1333457899999999999999999999999999999842          1


Q ss_pred             CCCCEEEeecccceeccCCCc-----ccccccCCcccccccccC--------CCCCCcchHHHHHHHHHHhh-CCCCCCC
Q 014171          104 EDSSLKATDFGLSDFIKPGKK-----FQDIVGSAYYVAPEVLKR--------KSGPESDVWSIGVITYILLC-GRRPFWD  169 (429)
Q Consensus       104 ~~~~~kL~Dfg~a~~~~~~~~-----~~~~~g~~~y~aPE~~~~--------~~~~~~DiwslG~il~~l~~-g~~pf~~  169 (429)
                      ....+||+|||++........     .....||+.|+|||++.+        .++.++||||+||++|+|++ |..||.+
T Consensus       163 ~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~  242 (434)
T 2rio_A          163 ENLRILISDFGLCKKLDSGQSSFRTNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGD  242 (434)
T ss_dssp             CSCEEEECCCTTCEECCC--------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCS
T ss_pred             CceEEEEcccccceecCCCCccceeeecCCCCCCCccCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCC
Confidence            345899999999987754322     234579999999999853        45889999999999999999 9999976


Q ss_pred             CChhHHHHHHHhcCCCCCCCC---CCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          170 KTEDGIFKEVLRNKPDFRRKP---WPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       170 ~~~~~~~~~i~~~~~~~~~~~---~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      .....  ..+..+....+...   ...+++++++||.+||+.||.+|||+.++++||||...
T Consensus       243 ~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~hp~f~~~  302 (434)
T 2rio_A          243 KYSRE--SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVLRHPLFWPK  302 (434)
T ss_dssp             TTTHH--HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSCH
T ss_pred             chhhH--HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHHHHhCCccCCc
Confidence            54433  34444443333211   12345789999999999999999999999999999753

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.8e-33  Score=269.89  Aligned_cols=178  Identities=22%  Similarity=0.234  Sum_probs=140.1

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||+++
T Consensus       165 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~---~~~~~kL~DFG~a~  240 (373)
T 3c1x_A          165 SPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD---EKFTVKVADFGLAR  240 (373)
T ss_dssp             CCEEEEECCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTCCEEECCC----
T ss_pred             CeEEEEECCCCCCHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEEC---CCCCEEEeeccccc
Confidence            457899999999999998543 35689999999999999999999999999999999999998   57899999999998


Q ss_pred             eccCCCc-----ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCC
Q 014171          118 FIKPGKK-----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKP  190 (429)
Q Consensus       118 ~~~~~~~-----~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~  190 (429)
                      .......     .....+++.|+|||++.+ .++.++||||+||++|+|++ |.+||.+.+.......+..+.....   
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~---  317 (373)
T 3c1x_A          241 DMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQ---  317 (373)
T ss_dssp             -----------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCC---
T ss_pred             cccccccccccccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCC---
Confidence            6543221     123456788999999864 56889999999999999999 7888887777777766666553322   


Q ss_pred             CCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          191 WPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       191 ~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      ...++..+.++|.+||+.||.+|||+.+++++
T Consensus       318 p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~  349 (373)
T 3c1x_A          318 PEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  349 (373)
T ss_dssp             CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            24689999999999999999999999998853

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=100.00  E-value=1.2e-32  Score=254.81  Aligned_cols=175  Identities=18%  Similarity=0.196  Sum_probs=148.0

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC--CeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~--i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      ..++|||||+||+|.+++.......+++..+..++.||+.||.|||++|  |+||||||+||+++   .++.++|+|||+
T Consensus        83 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~---~~~~~~l~~~~~  159 (271)
T 3kmu_A           83 HPTLITHWMPYGSLYNVLHEGTNFVVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMID---EDMTARISMADV  159 (271)
T ss_dssp             SCEEEEECCTTCBHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEEC---TTSCEEEEGGGS
T ss_pred             CeEeeecccCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEc---CCcceeEEeccc
Confidence            4478999999999999997765556999999999999999999999999  99999999999998   578899999887


Q ss_pred             ceeccCCCcccccccCCcccccccccCCC----CCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCC
Q 014171          116 SDFIKPGKKFQDIVGSAYYVAPEVLKRKS----GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW  191 (429)
Q Consensus       116 a~~~~~~~~~~~~~g~~~y~aPE~~~~~~----~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  191 (429)
                      +.....    ....||+.|+|||++.+..    +.++||||+||++|+|++|+.||.+.+.......+.......  ..+
T Consensus       160 ~~~~~~----~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~--~~~  233 (271)
T 3kmu_A          160 KFSFQS----PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVALEGLRP--TIP  233 (271)
T ss_dssp             CCTTSC----TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHHSCCCC--CCC
T ss_pred             eeeecc----cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHhcCCCC--CCC
Confidence            654322    3447899999999987532    237999999999999999999999888887777766554332  233


Q ss_pred             CCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          192 PSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       192 ~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ..+++.+.++|.+||+.||.+|||++++++
T Consensus       234 ~~~~~~~~~li~~~l~~~p~~Rps~~~il~  263 (271)
T 3kmu_A          234 PGISPHVSKLMKICMNEDPAKRPKFDMIVP  263 (271)
T ss_dssp             TTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            568999999999999999999999999874

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=100.00  E-value=5e-33  Score=264.38  Aligned_cols=179  Identities=18%  Similarity=0.236  Sum_probs=150.6

Q ss_pred             cceeEeeecCCCChHHHHHhhc--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEE
Q 014171           38 RKLRRIRLCEGGELLDRILAKK--------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLK  109 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~--------~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~k  109 (429)
                      ..|+|||||.||+|.+++...+        ...+++..+..++.||+.||.|||++||+||||||+||+++   .++.+|
T Consensus       102 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~---~~~~~k  178 (322)
T 1p4o_A          102 PTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTVK  178 (322)
T ss_dssp             SCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEEC---TTCCEE
T ss_pred             ccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEc---CCCeEE
Confidence            4578999999999999996542        14579999999999999999999999999999999999998   578999


Q ss_pred             EeecccceeccCCCc---ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCC
Q 014171          110 ATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKP  184 (429)
Q Consensus       110 L~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~  184 (429)
                      |+|||++........   .....+++.|+|||++.+ .++.++||||+|+++|+|++ |..||.+.+.......+.....
T Consensus       179 l~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~  258 (322)
T 1p4o_A          179 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGL  258 (322)
T ss_dssp             ECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCC
T ss_pred             ECcCccccccccccccccccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCCc
Confidence            999999976543221   223456889999999864 56889999999999999999 8999988888887777766543


Q ss_pred             CCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          185 DFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       185 ~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      ..   ....++..+.++|.+||+.||.+|||+.+++++
T Consensus       259 ~~---~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~  293 (322)
T 1p4o_A          259 LD---KPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS  293 (322)
T ss_dssp             CC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CC---CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHH
Confidence            22   234689999999999999999999999999875

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=100.00  E-value=5.7e-34  Score=275.80  Aligned_cols=180  Identities=16%  Similarity=0.204  Sum_probs=141.1

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+||||| ||+|.+++... .+.+++..+..++.||+.||.|||++||+||||||+|||++.. .++.+||+|||+|+.
T Consensus       127 ~~lv~e~~-g~~L~~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~-~~~~~kl~DFG~a~~  203 (364)
T 3op5_A          127 RFMIMDRF-GSDLQKIYEAN-AKRFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYK-NPDQVYLVDYGLAYR  203 (364)
T ss_dssp             EEEEEECE-EEEHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESS-CTTCEEECCCTTCEE
T ss_pred             EEEEEeCC-CCCHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecC-CCCeEEEEECCccee
Confidence            46899999 99999988654 4679999999999999999999999999999999999999832 368899999999976


Q ss_pred             ccCCCc--------ccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHh-c---C-C
Q 014171          119 IKPGKK--------FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLR-N---K-P  184 (429)
Q Consensus       119 ~~~~~~--------~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~-~---~-~  184 (429)
                      ......        .....||+.|+|||++.+. ++.++||||+||++|+|++|+.||.+............ .   . .
T Consensus       204 ~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~  283 (364)
T 3op5_A          204 YCPEGVHKAYAADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIA  283 (364)
T ss_dssp             SSGGGCCCCSSCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHH
T ss_pred             cccCCcccccccCcccccCCCCCccCHHHhCCCCCCchhhHHHHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHH
Confidence            543221        1334599999999998764 68899999999999999999999986433322211111 0   0 0


Q ss_pred             CCC--CCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          185 DFR--RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       185 ~~~--~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      .+.  ......++.++.+++..||..||.+||++.++++
T Consensus       284 ~~~~~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~l~~  322 (364)
T 3op5_A          284 SLMDKCFPAANAPGEIAKYMETVKLLDYTEKPLYENLRD  322 (364)
T ss_dssp             HHHHHHSCTTCCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             HHHHHhcccccCHHHHHHHHHHHhcCCCCCCCCHHHHHH
Confidence            000  0001357899999999999999999999998874

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=100.00  E-value=5.1e-33  Score=263.12  Aligned_cols=180  Identities=25%  Similarity=0.292  Sum_probs=149.1

Q ss_pred             cceeEeeecCCCChHHHHHhhcCC----------------CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEee
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDS----------------RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS  101 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~----------------~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~  101 (429)
                      ..|+|||||.||+|.+++......                .+++..+..++.||+.||.|||++||+||||||+||+++ 
T Consensus       101 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~-  179 (313)
T 1t46_A          101 PTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLT-  179 (313)
T ss_dssp             SCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEE-
T ss_pred             CcEEEEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEc-
Confidence            457899999999999999765422                489999999999999999999999999999999999998 


Q ss_pred             cCCCCCEEEeecccceeccCCCc---ccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHH
Q 014171          102 AKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIF  176 (429)
Q Consensus       102 ~~~~~~~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~  176 (429)
                        .++.+||+|||++........   .....+++.|+|||++. ..++.++||||+|+++|+|++ |..||.+.......
T Consensus       180 --~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~  257 (313)
T 1t46_A          180 --HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKF  257 (313)
T ss_dssp             --TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHH
T ss_pred             --CCCCEEEccccccccccccccceeccCCCCcceeeChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCCcccchhHH
Confidence              578999999999987654432   23345678899999885 456889999999999999999 99999887766655


Q ss_pred             HHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          177 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       177 ~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      ..........  .....++..+.++|.+||+.||.+|||+.+++++
T Consensus       258 ~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  301 (313)
T 1t46_A          258 YKMIKEGFRM--LSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL  301 (313)
T ss_dssp             HHHHHHTCCC--CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHHhccCCCC--CCcccCCHHHHHHHHHHcCCCchhCcCHHHHHHH
Confidence            5554443322  2234689999999999999999999999999853

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=100.00  E-value=2.5e-33  Score=267.34  Aligned_cols=177  Identities=21%  Similarity=0.215  Sum_probs=148.6

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .++|+||+.+|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++.   ++.+||+|||+|+.
T Consensus        91 ~~~v~e~~~~g~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~---~~~~kl~Dfg~a~~  166 (327)
T 3poz_A           91 VQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT---PQHVKITDFGLAKL  166 (327)
T ss_dssp             EEEEEECCTTCBHHHHHHHS-TTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEE---TTEEEECCTTHHHH
T ss_pred             eEEEEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECC---CCCEEEccCcceeE
Confidence            46799999999999998764 367999999999999999999999999999999999999984   78899999999987


Q ss_pred             ccCCCcc---cccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          119 IKPGKKF---QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       119 ~~~~~~~---~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      .......   ....+|+.|+|||.+.+ .++.++||||+||++|+|++ |+.||.+.+.......+..+...   ...+.
T Consensus       167 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~  243 (327)
T 3poz_A          167 LGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL---PQPPI  243 (327)
T ss_dssp             HTTTCC-------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCC---CCCTT
T ss_pred             ccCCcccccccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCC---CCCcc
Confidence            6543322   23356779999999864 56889999999999999999 99999988887777666655422   22346


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      ++..+.+++.+||+.||.+|||+.+++++
T Consensus       244 ~~~~~~~li~~~l~~~p~~Rps~~ell~~  272 (327)
T 3poz_A          244 CTIDVYMIMVKCWMIDADSRPKFRELIIE  272 (327)
T ss_dssp             BCHHHHHHHHHHTCSCGGGSCCHHHHHHH
T ss_pred             CCHHHHHHHHHHcCCChhhCCCHHHHHHH
Confidence            78999999999999999999999999864

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=100.00  E-value=4.9e-33  Score=259.36  Aligned_cols=178  Identities=20%  Similarity=0.231  Sum_probs=147.5

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++... ...+++..+..++.|++.||.|||++||+||||||+||+++.   ++.+||+|||.+.
T Consensus        86 ~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~---~~~~kl~Dfg~~~  161 (281)
T 3cc6_A           86 PTWIIMELYPYGELGHYLERN-KNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVAS---PECVKLGDFGLSR  161 (281)
T ss_dssp             SCEEEEECCTTCBHHHHHHHH-TTTCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEE---TTEEEECCCCGGG
T ss_pred             CCEEEEecCCCCCHHHHHHhc-cccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECC---CCcEEeCccCCCc
Confidence            347899999999999999665 356999999999999999999999999999999999999994   7789999999997


Q ss_pred             eccCCCc--ccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          118 FIKPGKK--FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       118 ~~~~~~~--~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      .......  .....+++.|+|||++. ..++.++||||+|+++|+|++ |+.||...........+.......   ....
T Consensus       162 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~---~~~~  238 (281)
T 3cc6_A          162 YIEDEDYYKASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLP---KPDL  238 (281)
T ss_dssp             CC---------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCC---CCTT
T ss_pred             ccccccccccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCC---CCCC
Confidence            6643322  23345678899999986 456889999999999999998 999998888777777666554322   2245


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      +++.+.++|.+||..||.+|||+.+++++
T Consensus       239 ~~~~l~~li~~~l~~~p~~Rps~~ell~~  267 (281)
T 3cc6_A          239 CPPVLYTLMTRCWDYDPSDRPRFTELVCS  267 (281)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCHHHHHHHHHHccCCchhCcCHHHHHHH
Confidence            79999999999999999999999999843

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=100.00  E-value=2.6e-33  Score=279.09  Aligned_cols=178  Identities=20%  Similarity=0.248  Sum_probs=151.0

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.+|+|.+++.......+++..+..++.||+.||.|||++||+||||||+|||++   .++.+||+|||+++
T Consensus       256 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~---~~~~~kl~DFG~a~  332 (454)
T 1qcf_A          256 PIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVS---ASLVCKIADFGLAR  332 (454)
T ss_dssp             SCEEEECCCTTCBHHHHHHSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEEC---TTCCEEECSTTGGG
T ss_pred             ccEEEEeecCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEC---CCCcEEEeeCCCce
Confidence            357899999999999999765445789999999999999999999999999999999999998   57899999999998


Q ss_pred             eccCCCc--ccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          118 FIKPGKK--FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       118 ~~~~~~~--~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      .......  .....+++.|+|||++. +.++.++||||+||++|+|++ |+.||.+.+..+....+..+..   .+....
T Consensus       333 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~---~~~~~~  409 (454)
T 1qcf_A          333 VIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYR---MPRPEN  409 (454)
T ss_dssp             GBCCHHHHTTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCC---CCCCTT
T ss_pred             EcCCCceeccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC---CCCCCC
Confidence            6643211  12334577899999986 567889999999999999999 9999999888888877766532   222356


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      +++.+.++|.+||..||.+|||++++++
T Consensus       410 ~~~~l~~li~~cl~~dp~~RPt~~~i~~  437 (454)
T 1qcf_A          410 CPEELYNIMMRCWKNRPEERPTFEYIQS  437 (454)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCHHHHHHHHHHccCChhHCcCHHHHHH
Confidence            8999999999999999999999998874

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=100.00  E-value=6e-33  Score=263.83  Aligned_cols=178  Identities=29%  Similarity=0.514  Sum_probs=149.1

Q ss_pred             ccceeEeeecCC-CChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           37 LRKLRRIRLCEG-GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        37 ~~~~lv~e~~~g-g~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      ...++|+||+.+ |+|.+++...  +.+++..+..++.||+.||.|||++||+||||||+||+++.  +++.+||+|||+
T Consensus       121 ~~~~lv~e~~~~~~~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~--~~~~~kL~Dfg~  196 (320)
T 3a99_A          121 DSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELKLIDFGS  196 (320)
T ss_dssp             SEEEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET--TTTEEEECCCTT
T ss_pred             CcEEEEEEcCCCCccHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeC--CCCCEEEeeCcc
Confidence            345789999987 8999999665  68999999999999999999999999999999999999983  367899999999


Q ss_pred             ceeccCCCcccccccCCcccccccccCC-C-CCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          116 SDFIKPGKKFQDIVGSAYYVAPEVLKRK-S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       116 a~~~~~~~~~~~~~g~~~y~aPE~~~~~-~-~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      +...... ......||+.|+|||++.+. + +.++||||+||++|+|++|+.||....      .+......++    ..
T Consensus       197 ~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~------~~~~~~~~~~----~~  265 (320)
T 3a99_A          197 GALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDE------EIIRGQVFFR----QR  265 (320)
T ss_dssp             CEECCSS-CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHCCCCCS----SC
T ss_pred             ccccccc-cccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChh------hhhccccccc----cc
Confidence            9876543 23456789999999998643 2 678899999999999999999996432      2333332222    46


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      +++++.+||.+||+.||.+|||++++++||||+...
T Consensus       266 ~~~~~~~li~~~l~~dp~~Rps~~~ll~hp~~~~~~  301 (320)
T 3a99_A          266 VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDVL  301 (320)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSCC
T ss_pred             CCHHHHHHHHHHccCChhhCcCHHHHhcCHhhcCcc
Confidence            899999999999999999999999999999998753

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=100.00  E-value=8.1e-33  Score=262.01  Aligned_cols=183  Identities=28%  Similarity=0.512  Sum_probs=144.6

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+||| +.+|+|.+++...  ..+++..+..++.||+.||.|||++||+||||||+||+++    ++.+||+|||++.
T Consensus       102 ~~~lv~e-~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~----~~~~kL~Dfg~~~  174 (313)
T 3cek_A          102 YIYMVME-CGNIDLNSWLKKK--KSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV----DGMLKLIDFGIAN  174 (313)
T ss_dssp             EEEEEEC-CCSEEHHHHHHHC--SSCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE----TTEEEECCCSSSC
T ss_pred             EEEEEEe-cCCCcHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEE----CCeEEEeeccccc
Confidence            3578999 6689999999654  6899999999999999999999999999999999999997    4789999999998


Q ss_pred             eccCCCc---ccccccCCcccccccccC------------CCCCCcchHHHHHHHHHHhhCCCCCCCCChh-HHHHHHHh
Q 014171          118 FIKPGKK---FQDIVGSAYYVAPEVLKR------------KSGPESDVWSIGVITYILLCGRRPFWDKTED-GIFKEVLR  181 (429)
Q Consensus       118 ~~~~~~~---~~~~~g~~~y~aPE~~~~------------~~~~~~DiwslG~il~~l~~g~~pf~~~~~~-~~~~~i~~  181 (429)
                      .......   .....|++.|+|||++.+            .++.++||||+||++|+|++|+.||...... .....+..
T Consensus       175 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~  254 (313)
T 3cek_A          175 QMQPDTTSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQISKLHAIID  254 (313)
T ss_dssp             C--------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHHC
T ss_pred             cccCccccccccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHh
Confidence            7643322   234578999999999864            4577899999999999999999999765433 33344443


Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          182 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      ......  .....+..+.++|.+||..||.+|||+.++++||||+...
T Consensus       255 ~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h~~~~~~~  300 (313)
T 3cek_A          255 PNHEIE--FPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQT  300 (313)
T ss_dssp             TTSCCC--CCCCSCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHCC-
T ss_pred             cccccC--CcccchHHHHHHHHHHccCCcccCcCHHHHhcCccccCCC
Confidence            332222  2234688999999999999999999999999999998754

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=100.00  E-value=3.6e-33  Score=261.44  Aligned_cols=180  Identities=26%  Similarity=0.431  Sum_probs=137.4

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..++|||||.||+|.+++... ...+++..+..++.|++.||.|||++||+||||||+||+++   .++.+||+|||++.
T Consensus        93 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~---~~~~~kl~Dfg~~~  168 (289)
T 3og7_A           93 QLAIVTQWCEGSSLYHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLH---EDNTVKIGDFGLAT  168 (289)
T ss_dssp             SCEEEEECCCEEEHHHHHTTC----CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE---TTTEEEECCCC---
T ss_pred             ccEEEEEecCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEEC---CCCCEEEccceecc
Confidence            357899999999999988543 36799999999999999999999999999999999999999   57899999999987


Q ss_pred             eccC---CCcccccccCCccccccccc----CCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHH-HHhcCCCCC-C
Q 014171          118 FIKP---GKKFQDIVGSAYYVAPEVLK----RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE-VLRNKPDFR-R  188 (429)
Q Consensus       118 ~~~~---~~~~~~~~g~~~y~aPE~~~----~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~-i~~~~~~~~-~  188 (429)
                      ....   ........||+.|+|||++.    ..++.++||||+|+++|+|++|+.||.+......... +........ .
T Consensus       169 ~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  248 (289)
T 3og7_A          169 EKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLS  248 (289)
T ss_dssp             ---------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHHHHTSCCCCTT
T ss_pred             ccccccccccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHhcccccCcchh
Confidence            6542   22234457899999999985    3457789999999999999999999988665554443 333333222 2


Q ss_pred             CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          189 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       189 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      .....+++.+.+||.+||+.||.+|||+.++++
T Consensus       249 ~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~  281 (289)
T 3og7_A          249 KVRSNCPKRMKRLMAECLKKKRDERPSFPRILA  281 (289)
T ss_dssp             SSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hccccCCHHHHHHHHHHccCChhhCCCHHHHHH
Confidence            233568899999999999999999999999874

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=100.00  E-value=3e-33  Score=260.89  Aligned_cols=178  Identities=23%  Similarity=0.368  Sum_probs=150.5

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|||||.+|+|.+++.......+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++..
T Consensus        95 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~kl~Dfg~~~~  171 (284)
T 2a19_B           95 LFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLV---DTKQVKIGDFGLVTS  171 (284)
T ss_dssp             EEEEECCCCSCBHHHHHHHGGGSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEE---ETTEEEECCCTTCEE
T ss_pred             EEEEEeccCCCCHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEc---CCCCEEECcchhhee
Confidence            57899999999999999877667899999999999999999999999999999999999999   477899999999988


Q ss_pred             ccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHH
Q 014171          119 IKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNS  197 (429)
Q Consensus       119 ~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  197 (429)
                      ...........|++.|+|||++.+ .++.++||||+|+++|+|++|..|+...  ......+....      ....++..
T Consensus       172 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~--~~~~~~~~~~~------~~~~~~~~  243 (284)
T 2a19_B          172 LKNDGKRTRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHVCDTAFET--SKFFTDLRDGI------ISDIFDKK  243 (284)
T ss_dssp             SSCCSCCCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHHHHHHHSCCSSHHHH--HHHHHHHHTTC------CCTTSCHH
T ss_pred             ccccccccccCCcccccChhhhccCCCcchhhhHHHHHHHHHHHhcCCcchhH--HHHHHHhhccc------ccccCCHH
Confidence            766555566689999999999865 4588999999999999999999887422  22223333222      12357899


Q ss_pred             HHHHHHHhccCCccCcCCHHHHhCCCcccc
Q 014171          198 AKDFVKKLLVKDPRARLTAAQALSHPWVRE  227 (429)
Q Consensus       198 ~~~li~~~l~~dp~~R~s~~e~l~h~~~~~  227 (429)
                      ++++|.+||+.||.+|||+.+++++.|.-.
T Consensus       244 ~~~li~~~l~~dp~~Rps~~e~l~~l~~~~  273 (284)
T 2a19_B          244 EKTLLQKLLSKKPEDRPNTSEILRTLTVWK  273 (284)
T ss_dssp             HHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred             HHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence            999999999999999999999999877543

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=100.00  E-value=9.9e-33  Score=261.34  Aligned_cols=178  Identities=18%  Similarity=0.219  Sum_probs=144.7

Q ss_pred             ceeEeeecCCCChHHHHHhh----cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecc
Q 014171           39 KLRRIRLCEGGELLDRILAK----KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG  114 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~----~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg  114 (429)
                      .|+|||||.+|+|.+++...    ....+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||
T Consensus       116 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~---~~~~~kl~Dfg  192 (313)
T 3brb_A          116 PMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLR---DDMTVCVADFG  192 (313)
T ss_dssp             EEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEEC---TTSCEEECSCS
T ss_pred             cEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEc---CCCcEEEeecC
Confidence            46899999999999998543    335699999999999999999999999999999999999998   57899999999


Q ss_pred             cceeccCCCc---ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCC
Q 014171          115 LSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRK  189 (429)
Q Consensus       115 ~a~~~~~~~~---~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~  189 (429)
                      ++........   .....+++.|+|||.+.+ .++.++||||+|+++|+|++ |..||.+.........+..+...   .
T Consensus       193 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~---~  269 (313)
T 3brb_A          193 LSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRL---K  269 (313)
T ss_dssp             CC----------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCC---C
T ss_pred             cceecccccccCcccccCCCccccCchhhcCCCccchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCCC---C
Confidence            9986643321   223456788999999865 45889999999999999999 89999988888888777765432   2


Q ss_pred             CCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          190 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       190 ~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      ....+++.+.++|.+||..||.+|||+.+++++
T Consensus       270 ~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~  302 (313)
T 3brb_A          270 QPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQ  302 (313)
T ss_dssp             CBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             CCccccHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            235689999999999999999999999999853

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=100.00  E-value=4.5e-33  Score=261.62  Aligned_cols=183  Identities=20%  Similarity=0.275  Sum_probs=145.2

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecC--CCCCEEEeecc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK--EDSSLKATDFG  114 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~--~~~~~kL~Dfg  114 (429)
                      ...|+||||| ||+|.+++... +..+++..+..++.||+.||.|||++||+||||||+||+++..+  ....+||+|||
T Consensus        79 ~~~~lv~e~~-~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg  156 (298)
T 1csn_A           79 LHNVLVIDLL-GPSLEDLLDLC-GRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFG  156 (298)
T ss_dssp             TEEEEEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCT
T ss_pred             ceeEEEEEec-CCCHHHHHHHh-ccCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECc
Confidence            3457899999 99999998654 35699999999999999999999999999999999999998531  23459999999


Q ss_pred             cceeccCCCc--------ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCC---hhHHHHHHHhc
Q 014171          115 LSDFIKPGKK--------FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKT---EDGIFKEVLRN  182 (429)
Q Consensus       115 ~a~~~~~~~~--------~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~---~~~~~~~i~~~  182 (429)
                      ++........        .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+..   .......+...
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  236 (298)
T 1csn_A          157 MVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGEK  236 (298)
T ss_dssp             TCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHHH
T ss_pred             cccccccccccccccccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCcchhhccccHHHHHHHHhh
Confidence            9987654322        245578999999999875 45889999999999999999999998743   33333333322


Q ss_pred             CCCCC-CCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          183 KPDFR-RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       183 ~~~~~-~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ....+ ....+.+++++.+++.+||+.||.+|||++++++
T Consensus       237 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~  276 (298)
T 1csn_A          237 KQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQG  276 (298)
T ss_dssp             HHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             ccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHH
Confidence            21111 1122467999999999999999999999999874

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=100.00  E-value=9.7e-33  Score=267.87  Aligned_cols=177  Identities=23%  Similarity=0.343  Sum_probs=138.3

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||+||+|.+++... +..+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++.
T Consensus       120 ~~~lv~e~~~~~sL~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---~~~~~kl~Dfg~a~  195 (373)
T 2qol_A          120 PVMIVTEYMENGSLDSFLRKH-DAQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILIN---SNLVCKVSDFGLGR  195 (373)
T ss_dssp             SCEEEEECCTTCBHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTCCEEECCC----
T ss_pred             ceEEEEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEc---CCCCEEECcCcccc
Confidence            457899999999999998654 35799999999999999999999999999999999999998   57899999999998


Q ss_pred             eccCCCc----ccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCC
Q 014171          118 FIKPGKK----FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPW  191 (429)
Q Consensus       118 ~~~~~~~----~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  191 (429)
                      .......    .....+++.|+|||++. ..++.++||||+||++|+|++ |+.||.+.+.......+..+..   .+..
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~---~~~~  272 (373)
T 2qol_A          196 VLEDDPEAAYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYR---LPPP  272 (373)
T ss_dssp             ------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEE---CCCC
T ss_pred             ccccCCccceeccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC---CCCC
Confidence            7643321    11223467899999986 456889999999999999998 9999999888877777665432   1223


Q ss_pred             CCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          192 PSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       192 ~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ..++..+.++|.+||+.||.+||++.++++
T Consensus       273 ~~~~~~l~~li~~cl~~dp~~RPs~~~i~~  302 (373)
T 2qol_A          273 MDCPAALYQLMLDCWQKDRNNRPKFEQIVS  302 (373)
T ss_dssp             TTCBHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccccHHHHHHHHHHhCcChhhCcCHHHHHH
Confidence            467899999999999999999999999874

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=100.00  E-value=3.3e-33  Score=261.42  Aligned_cols=178  Identities=13%  Similarity=0.173  Sum_probs=140.8

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCC-----CCCEEEe
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE-----DSSLKAT  111 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~-----~~~~kL~  111 (429)
                      ...|+|||||.||+|.+++.... ..+++..+..++.||+.||.|||++||+||||||+||+++....     .+.+||+
T Consensus        85 ~~~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~  163 (289)
T 4fvq_A           85 DENILVQEFVKFGSLDTYLKKNK-NCINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLS  163 (289)
T ss_dssp             TCCEEEEECCTTCBHHHHHHHTG-GGCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEEC
T ss_pred             CCCEEEEECCCCCCHHHHHHhCC-CCCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeec
Confidence            34578999999999999996542 44999999999999999999999999999999999999985221     1129999


Q ss_pred             ecccceeccCCCcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCC
Q 014171          112 DFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK  189 (429)
Q Consensus       112 Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  189 (429)
                      |||.+......   ....|++.|+|||++.+  .++.++||||+||++|+|++|..|+..................++  
T Consensus       164 Dfg~~~~~~~~---~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~--  238 (289)
T 4fvq_A          164 DPGISITVLPK---DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYEDRHQLP--  238 (289)
T ss_dssp             CCCSCTTTSCH---HHHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCC--
T ss_pred             cCcccccccCc---cccCCcCcccCHHHhCCCCCCCchhHHHHHHHHHHHHHcCCCCCccccchHHHHHHhhccCCCC--
Confidence            99998654322   33467889999999874  468899999999999999996655555444444444444443333  


Q ss_pred             CCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          190 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       190 ~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                        ...+.++.++|.+||+.||.+|||+.+++++
T Consensus       239 --~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  269 (289)
T 4fvq_A          239 --APKAAELANLINNCMDYEPDHRPSFRAIIRD  269 (289)
T ss_dssp             --CCSSCTTHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             --CCCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence              2457889999999999999999999999864

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=100.00  E-value=8.3e-33  Score=278.15  Aligned_cols=197  Identities=17%  Similarity=0.243  Sum_probs=160.0

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG   86 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~   86 (429)
                      +.++|+|++.+++++..            ....|+|||||.+|+|.+++.......+++..+..++.||+.||.|||++|
T Consensus       271 ~~l~hpniv~l~~~~~~------------~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~  338 (495)
T 1opk_A          271 KEIKHPNLVQLLGVCTR------------EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKN  338 (495)
T ss_dssp             HHCCCTTBCCEEEEECS------------SSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HhcCCCCEeeEEEEEec------------CCcEEEEEEccCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            34456666665554432            234578999999999999997765567999999999999999999999999


Q ss_pred             CeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc--ccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh-
Q 014171           87 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-  162 (429)
Q Consensus        87 i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~--~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~-  162 (429)
                      |+||||||+|||++   .++.+||+|||+++.......  .....+++.|+|||++. +.++.++||||+||++|+|++ 
T Consensus       339 ivHrDlkp~NIll~---~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~  415 (495)
T 1opk_A          339 FIHRNLAARNCLVG---ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATY  415 (495)
T ss_dssp             EECSCCSGGGEEEC---GGGCEEECCTTCEECCTTCCEECCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTT
T ss_pred             cccCCCChhhEEEC---CCCcEEEeecccceeccCCceeecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhC
Confidence            99999999999998   478999999999987643322  12334567899999986 456889999999999999999 


Q ss_pred             CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       163 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      |..||.+.+.......+.....   ...+..+++.+.+||.+||+.||.+|||+.++++
T Consensus       416 g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~  471 (495)
T 1opk_A          416 GMSPYPGIDLSQVYELLEKDYR---MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  471 (495)
T ss_dssp             SCCSSTTCCGGGHHHHHHTTCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHcCCC---CCCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHH
Confidence            9999998888777766655432   2233568999999999999999999999999874

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=100.00  E-value=1.4e-32  Score=258.39  Aligned_cols=177  Identities=22%  Similarity=0.252  Sum_probs=146.8

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++... ...+++..+..++.|++.||.|||++||+||||||+||+++   .++.+||+|||++.
T Consensus       101 ~~~~v~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~---~~~~~kl~Dfg~a~  176 (298)
T 3f66_A          101 SPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLD---EKFTVKVADFGLAR  176 (298)
T ss_dssp             CCEEEEECCTTCBHHHHHHCT-TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---TTCCEEECSCGGGC
T ss_pred             ceEEEEeCCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEC---CCCCEEECcccccc
Confidence            346899999999999998653 36789999999999999999999999999999999999998   57899999999997


Q ss_pred             eccCCC-----cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCC
Q 014171          118 FIKPGK-----KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKP  190 (429)
Q Consensus       118 ~~~~~~-----~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~  190 (429)
                      ......     ......+|+.|+|||.+.+ .++.++||||+|+++|+|++ |.+||.+.........+..+.....+  
T Consensus       177 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  254 (298)
T 3f66_A          177 DMYDKEYYSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQP--  254 (298)
T ss_dssp             CCSCGGGCBC-----CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCCC--
T ss_pred             cccccchhccccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCCC--
Confidence            654322     1233456788999999864 56889999999999999999 66777777777777777666543332  


Q ss_pred             CCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          191 WPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       191 ~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                       ..+++.+.+++.+||..||.+|||+.++++
T Consensus       255 -~~~~~~l~~li~~~l~~~p~~Rps~~ell~  284 (298)
T 3f66_A          255 -EYCPDPLYEVMLKCWHPKAEMRPSFSELVS  284 (298)
T ss_dssp             -TTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             -ccCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence             457899999999999999999999999875

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=100.00  E-value=8.7e-33  Score=258.44  Aligned_cols=178  Identities=19%  Similarity=0.244  Sum_probs=151.1

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++.......+++..+..++.|++.||.|||++||+||||||+||+++   .++.++|+|||.+.
T Consensus        83 ~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~---~~~~~~l~Dfg~~~  159 (288)
T 3kfa_A           83 PFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVG---ENHLVKVADFGLSR  159 (288)
T ss_dssp             SEEEEEECCTTEEHHHHHHHCCTTTSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEEC---GGGCEEECCCCGGG
T ss_pred             CEEEEEEcCCCCcHHHHHHhcccCCccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEc---CCCCEEEccCccce
Confidence            357899999999999999876667799999999999999999999999999999999999998   46789999999997


Q ss_pred             eccCCCc--ccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          118 FIKPGKK--FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       118 ~~~~~~~--~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      .......  .....+++.|+|||++. ..++.++||||+|+++|+|++ |..||.+.........+......   .....
T Consensus       160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~  236 (288)
T 3kfa_A          160 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRM---ERPEG  236 (288)
T ss_dssp             TSCSSSSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCC---CCCTT
T ss_pred             eccCCccccccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCC---CCCCC
Confidence            6653332  23345678899999986 456889999999999999999 99999888887777766655322   22356


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      +++.+.++|.+||..||.+|||+.++++
T Consensus       237 ~~~~l~~li~~~l~~dp~~Rps~~~~~~  264 (288)
T 3kfa_A          237 CPEKVYELMRACWQWNPSDRPSFAEIHQ  264 (288)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCHHHHHHHHHHhCCChhhCcCHHHHHH
Confidence            8999999999999999999999999873

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=100.00  E-value=5.9e-33  Score=276.25  Aligned_cols=202  Identities=22%  Similarity=0.260  Sum_probs=158.2

Q ss_pred             ccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 014171            8 DTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGL   87 (429)
Q Consensus         8 ~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i   87 (429)
                      .++|+|++.+++++.             ....|+|||||.+|+|.+++....+..+++..+..++.||+.||.|||++||
T Consensus       235 ~l~hp~iv~~~~~~~-------------~~~~~iv~e~~~~gsL~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i  301 (452)
T 1fmk_A          235 KLRHEKLVQLYAVVS-------------EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNY  301 (452)
T ss_dssp             HCCCTTBCCEEEEEC-------------SSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             hCCCCCEeeEEEEEc-------------CCceEEEehhhcCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            445666655555432             1235789999999999999966545679999999999999999999999999


Q ss_pred             eecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc--ccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh-C
Q 014171           88 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-G  163 (429)
Q Consensus        88 ~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~--~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~-g  163 (429)
                      +||||||+|||++   .++.+||+|||+++.......  .....+++.|+|||++. +.++.++||||+||++|+|++ |
T Consensus       302 vHrDlkp~Nill~---~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g  378 (452)
T 1fmk_A          302 VHRDLRAANILVG---ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKG  378 (452)
T ss_dssp             CCSCCSGGGEEEC---GGGCEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTT
T ss_pred             eCCCCChhhEEEC---CCCCEEECCCccceecCCCceecccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCC
Confidence            9999999999998   478999999999986643221  22335678899999886 456889999999999999999 9


Q ss_pred             CCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC--CCccccC
Q 014171          164 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS--HPWVREG  228 (429)
Q Consensus       164 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~--h~~~~~~  228 (429)
                      +.||.+....+....+..+..   .+..+.+++.+.++|.+||+.||.+|||++++++  ..++...
T Consensus       379 ~~P~~~~~~~~~~~~i~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~  442 (452)
T 1fmk_A          379 RVPYPGMVNREVLDQVERGYR---MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST  442 (452)
T ss_dssp             CCSSTTCCHHHHHHHHHTTCC---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCS
T ss_pred             CCCCCCCCHHHHHHHHHcCCC---CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccC
Confidence            999999888888777765532   2223568999999999999999999999999886  3555543

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=100.00  E-value=9.1e-33  Score=255.32  Aligned_cols=177  Identities=18%  Similarity=0.308  Sum_probs=149.4

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||+||+|.+++... .+.+++..+..++.|++.||.|||++|++||||||+||+++   .++.+||+|||.+.
T Consensus        77 ~~~lv~e~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~---~~~~~kl~dfg~~~  152 (267)
T 3t9t_A           77 PICLVTEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG---ENQVIKVSDFGMTR  152 (267)
T ss_dssp             SCEEEECCCTTCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEEC---GGGCEEECCTTGGG
T ss_pred             CeEEEEeCCCCCcHHHHHhhC-cccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEC---CCCCEEEccccccc
Confidence            457899999999999998654 35799999999999999999999999999999999999998   47889999999987


Q ss_pred             eccCCC--cccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          118 FIKPGK--KFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       118 ~~~~~~--~~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      ......  ......+++.|+|||++. ..++.++|+||+|+++|+|++ |+.||.+.........+..+.....   ...
T Consensus       153 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~~---~~~  229 (267)
T 3t9t_A          153 FVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYK---PRL  229 (267)
T ss_dssp             GBCCHHHHSTTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCC---CTT
T ss_pred             ccccccccccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCCC---Ccc
Confidence            654321  112345677899999987 456889999999999999999 8999998888888777776643222   245


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ++..+.+++.+||+.||.+|||+.++++
T Consensus       230 ~~~~l~~li~~~l~~~p~~Rps~~~ll~  257 (267)
T 3t9t_A          230 ASTHVYQIMNHCWRERPEDRPAFSRLLR  257 (267)
T ss_dssp             SCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CcHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            7899999999999999999999999885

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=100.00  E-value=6.3e-33  Score=258.17  Aligned_cols=176  Identities=20%  Similarity=0.244  Sum_probs=143.3

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++.+.....+++..+..++.|++.||.|||++||+||||||+||+++   .++.+||+|||++.
T Consensus        89 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~---~~~~~~l~Dfg~~~  165 (278)
T 1byg_A           89 GLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVS---EDNVAKVSDFGLTK  165 (278)
T ss_dssp             CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---TTSCEEECCCCC--
T ss_pred             ceEEEEecCCCCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEe---CCCcEEEeeccccc
Confidence            357899999999999999766434589999999999999999999999999999999999998   57899999999987


Q ss_pred             eccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      ......  ....+++.|+|||++.+ .++.++||||+|+++|+|++ |..||...........+..+..   ......++
T Consensus       166 ~~~~~~--~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~---~~~~~~~~  240 (278)
T 1byg_A          166 EASSTQ--DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK---MDAPDGCP  240 (278)
T ss_dssp             ------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCC---CCCCTTCC
T ss_pred             cccccc--cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcCCC---CCCcccCC
Confidence            654332  23467889999999864 56889999999999999998 9999988887777766655432   22335689


Q ss_pred             HHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          196 NSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      +.+.++|.+||+.||.+|||+.++++
T Consensus       241 ~~l~~li~~~l~~~p~~Rps~~~l~~  266 (278)
T 1byg_A          241 PAVYEVMKNCWHLDAAMRPSFLQLRE  266 (278)
T ss_dssp             HHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HHHHHHHHHHhcCChhhCCCHHHHHH
Confidence            99999999999999999999999874

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=100.00  E-value=2.8e-33  Score=286.17  Aligned_cols=215  Identities=20%  Similarity=0.317  Sum_probs=160.5

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKK-DSRYTEKDAAVVVRQMLRVAAECHLH   85 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qil~aL~~lH~~   85 (429)
                      ..++|+|++.+.+++......      ......|+|||||.||+|.+++.... ...+++..+..++.|++.||.|||++
T Consensus        67 ~~L~HpnIV~l~~v~~~~~~~------~~~~~~~LVmEy~~ggsL~~~L~~~~~~~~lse~~i~~I~~QLl~aL~yLHs~  140 (676)
T 3qa8_A           67 KKLNHPNVVSAREVPDGLQKL------APNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHEN  140 (676)
T ss_dssp             HHCCBTTBCCEEECCTTTCCC------CTTSSCCCEEECCSSCBHHHHHHSSSCTTCCCSSHHHHHHHHHHHHHHHHHHT
T ss_pred             HhCCCCCCCceeeeecccccc------cCCCeEEEEEEeCCCCCHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            344666666666554432221      11234468999999999999996643 23699999999999999999999999


Q ss_pred             CCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCC
Q 014171           86 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGR  164 (429)
Q Consensus        86 ~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~  164 (429)
                      ||+||||||+||+++..+....+||+|||.+.............|++.|+|||++.+ .++.++||||+||++|+|++|.
T Consensus       141 gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~~~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLltG~  220 (676)
T 3qa8_A          141 RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGF  220 (676)
T ss_dssp             TBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCCCCCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHSSC
T ss_pred             CCccCCCCHHHeEeecCCCceeEEEcccccccccccccccccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHHCC
Confidence            999999999999999644445699999999988776666667789999999999874 5689999999999999999999


Q ss_pred             CCCCCCChhHHHH---------HH-----HhcCCCCC------CCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCc
Q 014171          165 RPFWDKTEDGIFK---------EV-----LRNKPDFR------RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW  224 (429)
Q Consensus       165 ~pf~~~~~~~~~~---------~i-----~~~~~~~~------~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~  224 (429)
                      .||.+......+.         .+     ..+...+.      ....+.+++.+.++|.+||..||.+|||+.++++|||
T Consensus       221 ~Pf~~~~~~~~~~~~i~~~~~~~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~elL~hp~  300 (676)
T 3qa8_A          221 RPFLPNWQPVQWHGKVREKSNEHIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQNPNVGC  300 (676)
T ss_dssp             SSCCSSCHHHHSSTTCC------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTCCCCTT
T ss_pred             CCCCcccchhhhhhhhhcccchhhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHHhcCHH
Confidence            9997653322110         00     00111111      1112235688999999999999999999999999999


Q ss_pred             ccc
Q 014171          225 VRE  227 (429)
Q Consensus       225 ~~~  227 (429)
                      |+.
T Consensus       301 F~~  303 (676)
T 3qa8_A          301 FQA  303 (676)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            986

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=100.00  E-value=5.3e-33  Score=263.08  Aligned_cols=178  Identities=26%  Similarity=0.509  Sum_probs=147.2

Q ss_pred             cceeEeee-cCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           38 RKLRRIRL-CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        38 ~~~lv~e~-~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ..++|+|| +.+|+|.+++...  +.+++..+..++.||+.||.|||++||+||||||+||+++.  .++.+||+|||++
T Consensus       112 ~~~~v~e~~~~~~~L~~~l~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~--~~~~~kl~dfg~~  187 (312)
T 2iwi_A          112 GFMLVLERPLPAQDLFDYITEK--GPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDL--RRGCAKLIDFGSG  187 (312)
T ss_dssp             -CEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEET--TTTEEEECCCSSC
T ss_pred             eEEEEEEecCCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeC--CCCeEEEEEcchh
Confidence            35689999 7899999999765  57999999999999999999999999999999999999983  3678999999999


Q ss_pred             eeccCCCcccccccCCcccccccccCC-C-CCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DFIKPGKKFQDIVGSAYYVAPEVLKRK-S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~~~~~~~~~~~~g~~~y~aPE~~~~~-~-~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      ....... .....|++.|+|||++.+. + +.++||||+|+++|+|++|+.||....      .+......++    ..+
T Consensus       188 ~~~~~~~-~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~------~~~~~~~~~~----~~~  256 (312)
T 2iwi_A          188 ALLHDEP-YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQ------EILEAELHFP----AHV  256 (312)
T ss_dssp             EECCSSC-BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHH------HHHHTCCCCC----TTS
T ss_pred             hhcccCc-ccccCCcccccCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChH------HHhhhccCCc----ccC
Confidence            8765433 3456789999999998643 2 458999999999999999999996431      2333333322    468


Q ss_pred             CHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                      +..++++|.+||+.||.+|||++++++||||+....
T Consensus       257 ~~~~~~li~~~l~~~p~~Rps~~e~l~~~~~~~~~~  292 (312)
T 2iwi_A          257 SPDCCALIRRCLAPKPSSRPSLEEILLDPWMQTPAE  292 (312)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHHHSTTTCC---
T ss_pred             CHHHHHHHHHHccCChhhCcCHHHHhcChhhcCchh
Confidence            999999999999999999999999999999997643

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=100.00  E-value=5.6e-33  Score=260.69  Aligned_cols=183  Identities=16%  Similarity=0.221  Sum_probs=146.0

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+||||| +|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++....++.+||+|||.+
T Consensus        78 ~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~  155 (296)
T 3uzp_A           78 DYNVMVMELL-GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA  155 (296)
T ss_dssp             TEEEEEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTC
T ss_pred             CceEEEEEec-CCCHHHHHHhh-ccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCc
Confidence            3357999999 89999998643 367999999999999999999999999999999999999963335788999999999


Q ss_pred             eeccCCCc--------ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCC---hhHHHHHHHhcCC
Q 014171          117 DFIKPGKK--------FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKT---EDGIFKEVLRNKP  184 (429)
Q Consensus       117 ~~~~~~~~--------~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~---~~~~~~~i~~~~~  184 (429)
                      ........        .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+..   .......+.....
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  235 (296)
T 3uzp_A          156 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM  235 (296)
T ss_dssp             EECBCTTTCCBCCCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCcCchhhhhhhhhhccccc
Confidence            87654322        245578999999999875 45889999999999999999999997643   2233333333221


Q ss_pred             CCC-CCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          185 DFR-RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       185 ~~~-~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ..+ ....+.+++.+.++|.+||+.||.+|||++++++
T Consensus       236 ~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  273 (296)
T 3uzp_A          236 STPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             CCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHH
Confidence            111 1112457899999999999999999999998874

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=100.00  E-value=1.2e-32  Score=262.53  Aligned_cols=177  Identities=21%  Similarity=0.219  Sum_probs=143.7

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..++|+||+.+|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++.   ++.+||+|||++.
T Consensus        90 ~~~~v~~~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~---~~~~kL~DfG~a~  165 (327)
T 3lzb_A           90 TVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKT---PQHVKITDFGLAK  165 (327)
T ss_dssp             SEEEEECCCSSCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEE---TTEEEECCTTC--
T ss_pred             CceEEEEecCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcC---CCCEEEccCccee
Confidence            356799999999999998765 367999999999999999999999999999999999999984   7789999999998


Q ss_pred             eccCCCc---ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCC
Q 014171          118 FIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWP  192 (429)
Q Consensus       118 ~~~~~~~---~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  192 (429)
                      .......   .....+++.|+|||++.+ .++.++||||+||++|+|++ |..||.+.........+.......   ..+
T Consensus       166 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~---~~~  242 (327)
T 3lzb_A          166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLP---QPP  242 (327)
T ss_dssp             --------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCC---CCT
T ss_pred             EccCccccccccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCC---CCc
Confidence            7643322   223356778999999864 56889999999999999999 999999888888777666554222   234


Q ss_pred             CCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          193 SISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       193 ~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      .++.++.++|.+||..||.+|||+.++++
T Consensus       243 ~~~~~l~~li~~~l~~dp~~Rps~~ell~  271 (327)
T 3lzb_A          243 ICTIDVYMIMRKCWMIDADSRPKFRELII  271 (327)
T ss_dssp             TBCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cCCHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            68999999999999999999999999985

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=100.00  E-value=8.1e-33  Score=259.70  Aligned_cols=176  Identities=19%  Similarity=0.220  Sum_probs=137.7

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|||||.||+|.+++.... ..+++..+..++.|++.||.|||++||+||||||+||+++.   ++.+||+|||++..
T Consensus        88 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~---~~~~kl~Dfg~~~~  163 (295)
T 3ugc_A           88 LKLIMEYLPYGSLRDYLQKHK-ERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTKV  163 (295)
T ss_dssp             CEEEEECCTTCBHHHHHHHCG-GGCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE---TTEEEECCCCSCC-
T ss_pred             eEEEEEeCCCCCHHHHHHhcc-cccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcC---CCeEEEccCccccc
Confidence            578999999999999996653 46999999999999999999999999999999999999994   78899999999987


Q ss_pred             ccCCCc----ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChh----------------HHHH
Q 014171          119 IKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED----------------GIFK  177 (429)
Q Consensus       119 ~~~~~~----~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~----------------~~~~  177 (429)
                      ......    .....++..|+|||++.+ .++.++||||+|+++|+|++|..|+......                ....
T Consensus       164 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (295)
T 3ugc_A          164 LPQDKEFFKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLIE  243 (295)
T ss_dssp             ------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCTTCSHHHHHHHHHCTTCCTHHHHHHHHH
T ss_pred             ccCCcceeeeccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccccCCChHHHHhhhcCccccchhHHHHHH
Confidence            643321    223456778999999864 5688999999999999999999998543211                1112


Q ss_pred             HHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          178 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       178 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      .+... .  ..+....+++++.++|.+||+.||.+|||+.++++
T Consensus       244 ~~~~~-~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~  284 (295)
T 3ugc_A          244 LLKNN-G--RLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  284 (295)
T ss_dssp             HHHTT-C--CCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHhcc-C--cCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            22222 1  22233568999999999999999999999999873

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=100.00  E-value=4.6e-33  Score=260.41  Aligned_cols=180  Identities=20%  Similarity=0.245  Sum_probs=151.6

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++... ...+++..+..++.|++.||.|||++||+||||||+||+++   .++.+||+|||++.
T Consensus        83 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~kl~Dfg~~~  158 (287)
T 1u59_A           83 ALMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLV---NRHYAKISDFGLSK  158 (287)
T ss_dssp             SEEEEEECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE---ETTEEEECCCTTCE
T ss_pred             CcEEEEEeCCCCCHHHHHHhC-CccCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEc---CCCCEEECccccee
Confidence            357899999999999988543 46799999999999999999999999999999999999999   47899999999998


Q ss_pred             eccCCCc----ccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCC
Q 014171          118 FIKPGKK----FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPW  191 (429)
Q Consensus       118 ~~~~~~~----~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  191 (429)
                      .......    .....+++.|+|||++. ..++.++||||+|+++|+|++ |+.||.+.........+..+...   ...
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~---~~~  235 (287)
T 1u59_A          159 ALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRM---ECP  235 (287)
T ss_dssp             ECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCC---CCC
T ss_pred             eeccCcceeeccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcC---CCC
Confidence            7654322    12335678999999986 456889999999999999998 99999988887777777665422   223


Q ss_pred             CCCCHHHHHHHHHhccCCccCcCCHHHHhCCCc
Q 014171          192 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPW  224 (429)
Q Consensus       192 ~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~  224 (429)
                      +.+++.+.++|.+||..||.+||++.+++++.+
T Consensus       236 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~  268 (287)
T 1u59_A          236 PECPPELYALMSDCWIYKWEDRPDFLTVEQRMR  268 (287)
T ss_dssp             TTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHH
T ss_pred             CCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHH
Confidence            568999999999999999999999999987643

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=100.00  E-value=3.4e-33  Score=269.09  Aligned_cols=181  Identities=15%  Similarity=0.207  Sum_probs=145.2

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCC--CEEEeecc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDS--SLKATDFG  114 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~--~~kL~Dfg  114 (429)
                      ...|+||||| ||+|.+++.......+++..+..++.||+.||.|||++||+||||||+||+++   .++  .+||+|||
T Consensus       131 ~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~---~~~~~~~kl~Dfg  206 (352)
T 2jii_A          131 KYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVD---PEDQSQVTLAGYG  206 (352)
T ss_dssp             TEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEE---TTEEEEEEECCGG
T ss_pred             cEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEc---CCCCceEEEecCc
Confidence            4458999999 99999999766457899999999999999999999999999999999999998   355  89999999


Q ss_pred             cceeccCCC--------cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCC--hhHHHHHH---H
Q 014171          115 LSDFIKPGK--------KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKT--EDGIFKEV---L  180 (429)
Q Consensus       115 ~a~~~~~~~--------~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~~~i---~  180 (429)
                      ++.......        ......||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+..  ........   .
T Consensus       207 ~a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  286 (352)
T 2jii_A          207 FAFRYCPSGKHVAYVEGSRSPHEGDLEFISMDLHKGCGPSRRSDLQSLGYCMLKWLYGFLPWTNCLPNTEDIMKQKQKFV  286 (352)
T ss_dssp             GCBCSSGGGCCCCCCTTSSCTTCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHH
T ss_pred             ceeeccCCCccccccccccccccCCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCcccCCcCHHHHHHHHHhcc
Confidence            997654321        1234578999999999876 56889999999999999999999997764  22222222   2


Q ss_pred             hcCCCCCC--CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          181 RNKPDFRR--KPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       181 ~~~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      .....+..  ..+..++..+.++|.+||+.||.+|||++++++
T Consensus       287 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  329 (352)
T 2jii_A          287 DKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEEKPPYAMLRN  329 (352)
T ss_dssp             HSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             CChhhhhhhccccCCCcHHHHHHHHHHHhCChhhCCCHHHHHH
Confidence            22222211  122357999999999999999999999999874

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=100.00  E-value=4.9e-33  Score=265.54  Aligned_cols=181  Identities=18%  Similarity=0.227  Sum_probs=142.1

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCC--CCCEEEeeccc
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE--DSSLKATDFGL  115 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~--~~~~kL~Dfg~  115 (429)
                      ..|+||||| ||+|.+++... ++.+++..+..++.||+.||.|||++||+||||||+||+++..+.  ...+||+|||+
T Consensus        79 ~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~  156 (330)
T 2izr_A           79 YNAMVLELL-GPSLEDLFDLC-DRTFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFAL  156 (330)
T ss_dssp             EEEEEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTT
T ss_pred             ccEEEEEeC-CCCHHHHHHHc-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEccc
Confidence            357899999 99999998654 468999999999999999999999999999999999999984221  12299999999


Q ss_pred             ceeccCCCc--------ccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCCCCCCCChh---HHHHHHHhcC
Q 014171          116 SDFIKPGKK--------FQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTED---GIFKEVLRNK  183 (429)
Q Consensus       116 a~~~~~~~~--------~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~---~~~~~i~~~~  183 (429)
                      +........        .....||+.|+|||++.+. ++.++||||+||++|+|++|+.||.+....   ..+..+....
T Consensus       157 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~~~  236 (330)
T 2izr_A          157 AKEYIDPETKKHIPYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPWQGLKADTLKERYQKIGDTK  236 (330)
T ss_dssp             CEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCSSHHHHHHHHHHHH
T ss_pred             ceeeecCCCCccccccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCccccccccHHHHHHHHHhhh
Confidence            987643322        2456899999999998754 588999999999999999999999875433   3334443322


Q ss_pred             CCCCCCC-CCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          184 PDFRRKP-WPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       184 ~~~~~~~-~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ...+... ....+ ++.+++.+||+.||.+||+++++++
T Consensus       237 ~~~~~~~~~~~~p-~~~~li~~~l~~~p~~RP~~~~l~~  274 (330)
T 2izr_A          237 RATPIEVLCENFP-EMATYLRYVRRLDFFEKPDYDYLRK  274 (330)
T ss_dssp             HHSCHHHHTTTCH-HHHHHHHHHHHCCTTCCCCHHHHHH
T ss_pred             ccCCHHHHhccCh-HHHHHHHHHHhCCCCCCCCHHHHHH
Confidence            2222111 12234 9999999999999999999988764

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=2.5e-32  Score=258.24  Aligned_cols=179  Identities=23%  Similarity=0.366  Sum_probs=139.0

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||.||+|.+++...  +.+++..+..++.|++.||.|||++||+||||||+||+++   .++.+||+|||++
T Consensus       107 ~~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~---~~~~~kl~Dfg~~  181 (309)
T 2h34_A          107 GQLYVDMRLINGVDLAAMLRRQ--GPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVS---ADDFAYLVDFGIA  181 (309)
T ss_dssp             TEEEEEEECCCCEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSCEEECSCCC-
T ss_pred             CeEEEEEEecCCCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEc---CCCCEEEecCccC
Confidence            3457899999999999999765  5799999999999999999999999999999999999998   5789999999998


Q ss_pred             eeccCCC--cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          117 DFIKPGK--KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       117 ~~~~~~~--~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      .......  ......|++.|+|||++.+ .++.++||||+|+++|+|++|+.||.+.........+ ......+....+.
T Consensus       182 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~  260 (309)
T 2h34_A          182 SATTDEKLTQLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGDQLSVMGAHI-NQAIPRPSTVRPG  260 (309)
T ss_dssp             ---------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSCHHHHHHHHH-HSCCCCGGGTSTT
T ss_pred             ccccccccccccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCchHHHHHHHh-ccCCCCccccCCC
Confidence            7654332  2234578999999999865 4588999999999999999999999877655443333 3333333334467


Q ss_pred             CCHHHHHHHHHhccCCccCcC-CHHHHhC
Q 014171          194 ISNSAKDFVKKLLVKDPRARL-TAAQALS  221 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~-s~~e~l~  221 (429)
                      ++..+.++|.+||+.||.+|| +++++++
T Consensus       261 ~~~~l~~li~~~l~~dP~~Rp~s~~~l~~  289 (309)
T 2h34_A          261 IPVAFDAVIARGMAKNPEDRYVTCGDLSA  289 (309)
T ss_dssp             CCTHHHHHHHHHTCSSGGGSCSSHHHHHH
T ss_pred             CCHHHHHHHHHhccCCHHHHHHhHHHHHH
Confidence            899999999999999999999 7877664

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=100.00  E-value=2.7e-32  Score=258.09  Aligned_cols=175  Identities=22%  Similarity=0.278  Sum_probs=140.9

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||.||+|.+++... ...+++.++..++.|++.||.|||++||+||||||+||+++   .++.+||+|||++
T Consensus        80 ~~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~~  155 (310)
T 3s95_A           80 KRLNFITEYIKGGTLRGIIKSM-DSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVR---ENKNVVVADFGLA  155 (310)
T ss_dssp             TEEEEEEECCTTCBHHHHHHHC-CTTSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEC---TTSCEEECCCTTC
T ss_pred             CeeEEEEEecCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEEC---CCCCEEEeecccc
Confidence            3456899999999999998653 46799999999999999999999999999999999999998   5788999999999


Q ss_pred             eeccCCCcc---------------cccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhH-----H
Q 014171          117 DFIKPGKKF---------------QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDG-----I  175 (429)
Q Consensus       117 ~~~~~~~~~---------------~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-----~  175 (429)
                      .........               ....||+.|+|||++.+ .++.++||||+||++|+|++|..||.......     .
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~~~~~~~~  235 (310)
T 3s95_A          156 RLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTMDFGLN  235 (310)
T ss_dssp             EECC--------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCBCTTSSBC
T ss_pred             eecccccccccccccccccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhhHHHHhhh
Confidence            866432221               14579999999999875 45889999999999999999999986533211     1


Q ss_pred             HHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          176 FKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       176 ~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ........      ..+.+++.+.++|.+||+.||.+|||+.++++
T Consensus       236 ~~~~~~~~------~~~~~~~~l~~li~~~l~~dP~~Rps~~~l~~  275 (310)
T 3s95_A          236 VRGFLDRY------CPPNCPPSFFPITVRCCDLDPEKRPSFVKLEH  275 (310)
T ss_dssp             HHHHHHHT------CCTTCCTTHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hhcccccc------CCCCCCHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            11111111      12457889999999999999999999999984

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.98  E-value=1.8e-32  Score=262.17  Aligned_cols=179  Identities=22%  Similarity=0.273  Sum_probs=150.4

Q ss_pred             cceeEeeecCCCChHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecC
Q 014171           38 RKLRRIRLCEGGELLDRILAKKD--------------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK  103 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~--------------~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~  103 (429)
                      ..|+|||||.||+|.+++.....              ..+++..+..++.||+.||.|||++||+||||||+||+++   
T Consensus       115 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~---  191 (334)
T 2pvf_A          115 PLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVT---  191 (334)
T ss_dssp             CCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---
T ss_pred             ceEEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEc---
Confidence            45789999999999999976532              3489999999999999999999999999999999999998   


Q ss_pred             CCCCEEEeecccceeccCCCc---ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHH
Q 014171          104 EDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKE  178 (429)
Q Consensus       104 ~~~~~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~  178 (429)
                      .++.+||+|||++........   .....+++.|+|||++.+ .++.++||||+||++|+|++ |..||.+.+..+....
T Consensus       192 ~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~  271 (334)
T 2pvf_A          192 ENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL  271 (334)
T ss_dssp             TTCCEEECCCTTCEECTTTSSEECCSCCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHH
T ss_pred             CCCCEEEccccccccccccccccccCCCCcccceeChHHhcCCCcChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHH
Confidence            578999999999987654332   223356788999998864 45889999999999999999 9999998888887777


Q ss_pred             HHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          179 VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       179 i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      +..+...   .....++..+.++|.+||+.||.+|||+.+++++
T Consensus       272 ~~~~~~~---~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  312 (334)
T 2pvf_A          272 LKEGHRM---DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED  312 (334)
T ss_dssp             HHHTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HhcCCCC---CCCccCCHHHHHHHHHHccCChhhCcCHHHHHHH
Confidence            7665432   2234689999999999999999999999999853

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.98  E-value=6.6e-33  Score=264.90  Aligned_cols=179  Identities=21%  Similarity=0.267  Sum_probs=148.1

Q ss_pred             cceeEeeecCCCChHHHHHhhc------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCC
Q 014171           38 RKLRRIRLCEGGELLDRILAKK------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED  105 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~------------~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~  105 (429)
                      ..|+|||||++|+|.+++....            ...+++..+..++.||+.||.|||++||+||||||+||+++   .+
T Consensus       124 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~---~~  200 (333)
T 2i1m_A          124 PVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLT---NG  200 (333)
T ss_dssp             SCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEE---GG
T ss_pred             ceEEEEecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEEC---CC
Confidence            4578999999999999997542            35689999999999999999999999999999999999998   47


Q ss_pred             CCEEEeecccceeccCCCc---ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHH
Q 014171          106 SSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVL  180 (429)
Q Consensus       106 ~~~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~  180 (429)
                      +.+||+|||++........   .....+++.|+|||++.+ .++.++||||+||++|+|++ |..||.+.........+.
T Consensus       201 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~  280 (333)
T 2i1m_A          201 HVAKIGDFGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKLV  280 (333)
T ss_dssp             GEEEBCCCGGGCCGGGCTTSEECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHHH
T ss_pred             CeEEECccccccccccccceeecCCCCCCccccCHHHhccCCCChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHHH
Confidence            8899999999986643322   233456788999998864 56889999999999999998 999998877666665555


Q ss_pred             hcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          181 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      .......  .....+..+.++|.+||+.||.+|||+.++++
T Consensus       281 ~~~~~~~--~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~  319 (333)
T 2i1m_A          281 KDGYQMA--QPAFAPKNIYSIMQACWALEPTHRPTFQQICS  319 (333)
T ss_dssp             HHTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hcCCCCC--CCCCCCHHHHHHHHHHhccChhhCcCHHHHHH
Confidence            5443322  23457899999999999999999999999984

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.98  E-value=1.3e-33  Score=271.32  Aligned_cols=180  Identities=17%  Similarity=0.155  Sum_probs=140.1

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+||||| ||+|.+++...  +.+++..+..++.||+.||.|||++||+||||||+||+++.. ..+.+||+|||+|+
T Consensus       126 ~~~lv~e~~-~~~L~~~l~~~--~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~-~~~~~kL~Dfg~a~  201 (345)
T 2v62_A          126 YRFMVMERL-GIDLQKISGQN--GTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYK-NPDQVYLADYGLSY  201 (345)
T ss_dssp             EEEEEEECE-EEEHHHHCBGG--GBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESS-STTSEEECCCTTCE
T ss_pred             EEEEEEecc-CCCHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccC-CCCcEEEEeCCCce
Confidence            346899999 99999988554  489999999999999999999999999999999999999842 12389999999998


Q ss_pred             eccCCC--------cccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCCCCCCCCh--hHHHHHHHhcCCCC
Q 014171          118 FIKPGK--------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTE--DGIFKEVLRNKPDF  186 (429)
Q Consensus       118 ~~~~~~--------~~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~i~~~~~~~  186 (429)
                      ......        ......||+.|+|||++.+. ++.++||||+||++|+|++|+.||.+...  .............+
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~  281 (345)
T 2v62_A          202 RYCPNGNHKQYQENPRKGHNGTIEFTSLDAHKGVALSRRSDVEILGYCMLRWLCGKLPWEQNLKDPVAVQTAKTNLLDEL  281 (345)
T ss_dssp             ESSGGGCCCCCCCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCTTGGGTTCHHHHHHHHHHHHHTT
T ss_pred             ecccccccccchhccccccCCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCccccccccHHHHHHHHhhcccc
Confidence            664221        12445789999999998764 58899999999999999999999965322  22211111111111


Q ss_pred             CC-----CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          187 RR-----KPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       187 ~~-----~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      +.     .....++.++.++|.+||..||.+|||++++++
T Consensus       282 ~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  321 (345)
T 2v62_A          282 PQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQALKK  321 (345)
T ss_dssp             THHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             cHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHHHHHH
Confidence            11     011257899999999999999999999998874

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.98  E-value=6.2e-33  Score=261.04  Aligned_cols=177  Identities=24%  Similarity=0.325  Sum_probs=138.9

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH--------HCCCeecCCCCCcEEEeecCCCCCEEE
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH--------LHGLVHRDMKPENFLFKSAKEDSSLKA  110 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH--------~~~i~H~dikp~Nil~~~~~~~~~~kL  110 (429)
                      .|+|||||.+|+|.+++.   ...+++..+..++.||+.||.|||        ++||+||||||+||+++   .++.+||
T Consensus        81 ~~lv~e~~~~g~L~~~l~---~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~---~~~~~kl  154 (301)
T 3q4u_A           81 LWLITHYHEMGSLYDYLQ---LTTLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVK---KNGQCCI  154 (301)
T ss_dssp             EEEEECCCTTCBHHHHHT---TCCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEEC---TTSCEEE
T ss_pred             eEEehhhccCCCHHHHHh---hcccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEc---CCCCEEE
Confidence            468999999999999983   357999999999999999999999        99999999999999998   5789999


Q ss_pred             eecccceeccCCCc-----ccccccCCcccccccccCC-------CCCCcchHHHHHHHHHHhhC----------CCCCC
Q 014171          111 TDFGLSDFIKPGKK-----FQDIVGSAYYVAPEVLKRK-------SGPESDVWSIGVITYILLCG----------RRPFW  168 (429)
Q Consensus       111 ~Dfg~a~~~~~~~~-----~~~~~g~~~y~aPE~~~~~-------~~~~~DiwslG~il~~l~~g----------~~pf~  168 (429)
                      +|||+|........     .....||+.|+|||++.+.       ++.++||||+||++|+|++|          ..||.
T Consensus       155 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~  234 (301)
T 3q4u_A          155 ADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFY  234 (301)
T ss_dssp             CCCTTCEEEETTTTEEECCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred             eeCCCeeecccccccccccccccccccceeChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCcccccccccccc
Confidence            99999976654332     2334789999999998754       23689999999999999999          88986


Q ss_pred             CCCh----hHHHHHHHhcCCCCCCCCC----CCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          169 DKTE----DGIFKEVLRNKPDFRRKPW----PSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       169 ~~~~----~~~~~~i~~~~~~~~~~~~----~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ....    ..............+..+.    ...+..+.+||.+||+.||.+|||+.++++
T Consensus       235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~  295 (301)
T 3q4u_A          235 DVVPNDPSFEDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKK  295 (301)
T ss_dssp             TTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGGGSCCHHHHHH
T ss_pred             ccCCCCcchhhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChhhCCCHHHHHH
Confidence            5422    2223333322221111110    124467999999999999999999999874

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.98  E-value=4.4e-33  Score=264.86  Aligned_cols=183  Identities=21%  Similarity=0.254  Sum_probs=141.5

Q ss_pred             cceeEeeecCCCChHHHHHhhc--CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           38 RKLRRIRLCEGGELLDRILAKK--DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~--~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      ..|+|||||.||+|.+++....  ...+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||+
T Consensus       109 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~---~~~~~kl~Dfg~  185 (321)
T 2qkw_B          109 EMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLD---ENFVPKITDFGI  185 (321)
T ss_dssp             CCEEEEECCTTCBTGGGSSSSCCCSCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEEC---TTCCEEECCCTT
T ss_pred             eEEEEEEcCCCCcHHHHHhccCCCccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEEC---CCCCEEEeeccc
Confidence            4578999999999999885442  23589999999999999999999999999999999999998   578999999999


Q ss_pred             ceeccCC---CcccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHH-----HHhcCCCC
Q 014171          116 SDFIKPG---KKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE-----VLRNKPDF  186 (429)
Q Consensus       116 a~~~~~~---~~~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~-----i~~~~~~~  186 (429)
                      +......   .......||+.|+|||++. +.++.++||||+||++|+|++|+.||.+.........     .......+
T Consensus       186 ~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  265 (321)
T 2qkw_B          186 SKKGTELDQTHLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL  265 (321)
T ss_dssp             CEECSSSSCCCCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSSSCCCHHHHTHHHHTTTCC
T ss_pred             ccccccccccccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcHHHHHHHHHhhhccccccH
Confidence            9865422   1223456899999999985 5678999999999999999999999976544321110     01111111


Q ss_pred             --------CCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCC
Q 014171          187 --------RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP  223 (429)
Q Consensus       187 --------~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~  223 (429)
                              .....+..+..+.+++.+||+.||.+|||+.+++++.
T Consensus       266 ~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L  310 (321)
T 2qkw_B          266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL  310 (321)
T ss_dssp             CSSSSSSCTTCSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred             HHhcChhhccccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHH
Confidence                    1111123356789999999999999999999998653

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.98  E-value=9.9e-33  Score=256.93  Aligned_cols=178  Identities=21%  Similarity=0.252  Sum_probs=150.4

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++....+..+++..+..++.|++.||.|||++||+||||||+||+++   .++.+||+|||.+.
T Consensus        81 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~---~~~~~kl~Dfg~~~  157 (279)
T 1qpc_A           81 PIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVS---DTLSCKIADFGLAR  157 (279)
T ss_dssp             SCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTSCEEECCCTTCE
T ss_pred             CcEEEEecCCCCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEc---CCCCEEECCCcccc
Confidence            357899999999999998654334799999999999999999999999999999999999998   57899999999998


Q ss_pred             eccCCCc--ccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          118 FIKPGKK--FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       118 ~~~~~~~--~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      .......  .....+++.|+|||++. +.++.++||||+|+++|+|++ |..||.+.+..+....+..+...   .....
T Consensus       158 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~~  234 (279)
T 1qpc_A          158 LIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRM---VRPDN  234 (279)
T ss_dssp             ECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC---CCCTT
T ss_pred             cccCcccccccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCC---CCccc
Confidence            7654332  12345678899999986 445889999999999999999 99999988888777777655322   22346


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ++..+.+++.+||..||.+|||++++++
T Consensus       235 ~~~~l~~li~~~l~~~p~~Rps~~~l~~  262 (279)
T 1qpc_A          235 CPEELYQLMRLCWKERPEDRPTFDYLRS  262 (279)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccHHHHHHHHHHhccChhhCCCHHHHHH
Confidence            8999999999999999999999999874

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.98  E-value=2.6e-32  Score=260.89  Aligned_cols=178  Identities=20%  Similarity=0.298  Sum_probs=143.9

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++... .+.+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++.
T Consensus       120 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~---~~~~~kl~Dfg~~~  195 (333)
T 1mqb_A          120 PMMIITEYMENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVN---SNLVCKVSDFGLSR  195 (333)
T ss_dssp             SEEEEEECCTTEEHHHHHHHT-TTCSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTCCEEECCCCC--
T ss_pred             CcEEEEeCCCCCcHHHHHHhC-CCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEEC---CCCcEEECCCCcch
Confidence            457899999999999988654 46799999999999999999999999999999999999998   57899999999998


Q ss_pred             eccCCCc----ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCC
Q 014171          118 FIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPW  191 (429)
Q Consensus       118 ~~~~~~~----~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  191 (429)
                      .......    .....+++.|+|||++.+ .++.++||||+||++|+|++ |..||.+.........+..+..   .+..
T Consensus       196 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~---~~~~  272 (333)
T 1mqb_A          196 VLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFR---LPTP  272 (333)
T ss_dssp             ---------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCC---CCCC
T ss_pred             hhccccccccccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCc---CCCc
Confidence            6643221    122345778999999864 56889999999999999999 9999998888877777765532   1223


Q ss_pred             CCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          192 PSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       192 ~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      ..++..+.++|.+||+.||.+||++.+++++
T Consensus       273 ~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~  303 (333)
T 1mqb_A          273 MDCPSAIYQLMMQCWQQERARRPKFADIVSI  303 (333)
T ss_dssp             TTCBHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             ccCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            4689999999999999999999999998753

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.98  E-value=1.5e-32  Score=257.47  Aligned_cols=176  Identities=20%  Similarity=0.263  Sum_probs=148.2

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++...  ..+++..+..++.||+.||.|||++||+||||||+||+++.   ++.+||+|||++.
T Consensus        91 ~~~lv~e~~~~~~L~~~l~~~--~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~---~~~~kl~Dfg~~~  165 (291)
T 1xbb_A           91 SWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVT---QHYAKISDFGLSK  165 (291)
T ss_dssp             SEEEEEECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE---TTEEEECCCTTCE
T ss_pred             CcEEEEEeCCCCCHHHHHHhC--cCCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeC---CCcEEEccCCcce
Confidence            457899999999999999654  67999999999999999999999999999999999999994   6789999999998


Q ss_pred             eccCCCcc----cccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCC
Q 014171          118 FIKPGKKF----QDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPW  191 (429)
Q Consensus       118 ~~~~~~~~----~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  191 (429)
                      ........    ....+++.|+|||++.+ .++.++||||+|+++|+|++ |+.||.+.........+..+...   ...
T Consensus       166 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~---~~~  242 (291)
T 1xbb_A          166 ALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM---GCP  242 (291)
T ss_dssp             ECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC---CCC
T ss_pred             eeccCCCcccccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCC---CCC
Confidence            76543321    22345688999999864 45789999999999999999 99999988887777776665422   223


Q ss_pred             CCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          192 PSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       192 ~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ..+++.+.++|.+||+.||.+|||+.++++
T Consensus       243 ~~~~~~l~~li~~~l~~dp~~Rps~~~l~~  272 (291)
T 1xbb_A          243 AGCPREMYDLMNLCWTYDVENRPGFAAVEL  272 (291)
T ss_dssp             TTCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             CCCCHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            468999999999999999999999999873

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.98  E-value=1.3e-32  Score=257.61  Aligned_cols=177  Identities=19%  Similarity=0.260  Sum_probs=149.4

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .++|+|||.+|+|.+++.... +.+++..+..++.|++.||.|||++||+||||||+||+++.   ++.+||+|||++..
T Consensus        95 ~~~v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~---~~~~kl~Dfg~~~~  170 (291)
T 1u46_A           95 MKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLAT---RDLVKIGDFGLMRA  170 (291)
T ss_dssp             CEEEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEE---TTEEEECCCTTCEE
T ss_pred             ceeeEecccCCCHHHHHHhcc-CCcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcC---CCCEEEcccccccc
Confidence            568999999999999997653 56999999999999999999999999999999999999984   77899999999987


Q ss_pred             ccCCCc----ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCC
Q 014171          119 IKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWP  192 (429)
Q Consensus       119 ~~~~~~----~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  192 (429)
                      ......    .....+++.|+|||++.+ .++.++||||+|+++|+|++ |..||.+.+.......+.......+  ...
T Consensus       171 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~--~~~  248 (291)
T 1u46_A          171 LPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLP--RPE  248 (291)
T ss_dssp             CCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCC--CCT
T ss_pred             ccccccchhhhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCCcccCCHHHHHHHHHccCCCCC--CCc
Confidence            654332    123456778999999864 45889999999999999999 9999999888888887776654433  235


Q ss_pred             CCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          193 SISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       193 ~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      .++..+.++|.+||..||.+|||+.++++
T Consensus       249 ~~~~~l~~li~~~l~~~p~~Rps~~~l~~  277 (291)
T 1u46_A          249 DCPQDIYNVMVQCWAHKPEDRPTFVALRD  277 (291)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CcCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence            68999999999999999999999999985

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.98  E-value=1e-32  Score=258.84  Aligned_cols=183  Identities=16%  Similarity=0.219  Sum_probs=145.3

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...++||||| +|+|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++.....+.+||+|||++
T Consensus        78 ~~~~lv~e~~-~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a  155 (296)
T 4hgt_A           78 DYNVMVMELL-GPSLEDLFNFC-SRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLA  155 (296)
T ss_dssp             TEEEEEEECC-CCBHHHHHHHT-TSCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTC
T ss_pred             CceEEEEEcc-CCCHHHHHHHh-cCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccc
Confidence            3457999999 99999988643 357999999999999999999999999999999999999943335788999999999


Q ss_pred             eeccCCCc--------ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChh---HHHHHHHhcCC
Q 014171          117 DFIKPGKK--------FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED---GIFKEVLRNKP  184 (429)
Q Consensus       117 ~~~~~~~~--------~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~---~~~~~i~~~~~  184 (429)
                      ........        .....||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+....   .....+.....
T Consensus       156 ~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  235 (296)
T 4hgt_A          156 KKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKM  235 (296)
T ss_dssp             EECBCTTTCCBCCCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSSSSHHHHHHHHHH
T ss_pred             eeccCcccCccCCCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCcccchhhhhhhhhhhhcccc
Confidence            87654322        235578999999999875 4588999999999999999999999764332   23333322221


Q ss_pred             CCC-CCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          185 DFR-RKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       185 ~~~-~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ..+ ......+++.+.++|.+||+.||.+|||++++++
T Consensus       236 ~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  273 (296)
T 4hgt_A          236 STPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQ  273 (296)
T ss_dssp             HSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHH
T ss_pred             cchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHH
Confidence            111 1112457899999999999999999999999874

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.98  E-value=8.3e-32  Score=252.95  Aligned_cols=175  Identities=22%  Similarity=0.237  Sum_probs=143.7

Q ss_pred             eeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccceec
Q 014171           40 LRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI  119 (429)
Q Consensus        40 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~  119 (429)
                      ++||||+.+|+|.+++... ...+++..+..++.|++.||.|||++||+||||||+||+++   .++.+||+|||++...
T Consensus        99 ~~v~e~~~~~~L~~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~---~~~~~kl~Dfg~~~~~  174 (298)
T 3pls_A           99 HVLLPYMCHGDLLQFIRSP-QRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLD---ESFTVKVADFGLARDI  174 (298)
T ss_dssp             EEEECCCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---TTCCEEECCTTSSCTT
T ss_pred             EEEEecccCCCHHHHHhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEc---CCCcEEeCcCCCcccc
Confidence            6899999999999998653 46789999999999999999999999999999999999998   5789999999999755


Q ss_pred             cCC-----CcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCC-CCCCCCChhHHHHHHHhcCCCCCCCCCC
Q 014171          120 KPG-----KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGR-RPFWDKTEDGIFKEVLRNKPDFRRKPWP  192 (429)
Q Consensus       120 ~~~-----~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~-~pf~~~~~~~~~~~i~~~~~~~~~~~~~  192 (429)
                      ...     .......+++.|+|||.+.+ .++.++||||+|+++|+|++|. +||...........+......   ....
T Consensus       175 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~  251 (298)
T 3pls_A          175 LDREYYSVQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRL---PQPE  251 (298)
T ss_dssp             TTGGGGCSCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCC---CCCT
T ss_pred             cCCcccccccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCC---CCCc
Confidence            332     12234567889999999875 4588999999999999999955 455555666666555555422   2234


Q ss_pred             CCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          193 SISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       193 ~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      .+++.+.+++.+||+.||.+|||+.++++
T Consensus       252 ~~~~~l~~li~~~l~~~p~~Rps~~~ll~  280 (298)
T 3pls_A          252 YCPDSLYQVMQQCWEADPAVRPTFRVLVG  280 (298)
T ss_dssp             TCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             cchHHHHHHHHHHccCChhhCcCHHHHHH
Confidence            67899999999999999999999999874

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.98  E-value=1.2e-32  Score=260.95  Aligned_cols=179  Identities=22%  Similarity=0.280  Sum_probs=146.0

Q ss_pred             ceeEeeecCCCChHHHHHhhcC--------------CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCC
Q 014171           39 KLRRIRLCEGGELLDRILAKKD--------------SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE  104 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~--------------~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~  104 (429)
                      .|+|||||.||+|.+++.....              ..+++..+..++.||+.||.|||++||+||||||+||+++   .
T Consensus       107 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~---~  183 (316)
T 2xir_A          107 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---E  183 (316)
T ss_dssp             CEEEEECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---G
T ss_pred             eEEEEEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEEC---C
Confidence            5789999999999999976532              1289999999999999999999999999999999999998   4


Q ss_pred             CCCEEEeecccceeccCCCc---ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHH
Q 014171          105 DSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEV  179 (429)
Q Consensus       105 ~~~~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i  179 (429)
                      ++.+||+|||++........   .....|++.|+|||++.+ .++.++||||+||++|+|++ |..||.+..........
T Consensus       184 ~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~  263 (316)
T 2xir_A          184 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR  263 (316)
T ss_dssp             GGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHH
T ss_pred             CCCEEECCCccccccccCccceeccCCCcceeecCchhhccccccchhHHHHHHHHHHHHHhCCCCCCcccchhHHHHHH
Confidence            78899999999986643322   234467889999999864 56889999999999999998 99999877655444433


Q ss_pred             HhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          180 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      ........  ....+++.+.++|.+||+.||.+|||+.++++|
T Consensus       264 ~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~  304 (316)
T 2xir_A          264 LKEGTRMR--APDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  304 (316)
T ss_dssp             HHHTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hccCccCC--CCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence            33322222  224579999999999999999999999999865

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.98  E-value=1.3e-32  Score=259.66  Aligned_cols=181  Identities=20%  Similarity=0.271  Sum_probs=144.0

Q ss_pred             cceeEeeecCCCChHHHHHhhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           38 RKLRRIRLCEGGELLDRILAKK-DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~-~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ..|+|||||.||+|.+++.... ...+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++
T Consensus       104 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~---~~~~~kl~Dfg~~  180 (307)
T 2nru_A          104 DLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLD---EAFTAKISDFGLA  180 (307)
T ss_dssp             SCEEEEECCTTCBHHHHHHTGGGCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TTCCEEECCCTTC
T ss_pred             ceEEEEEecCCCcHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEc---CCCcEEEeecccc
Confidence            4578999999999999997543 35699999999999999999999999999999999999998   5789999999999


Q ss_pred             eeccCCCc---ccccccCCcccccccccCCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHH----HHHHhcCCCC---
Q 014171          117 DFIKPGKK---FQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF----KEVLRNKPDF---  186 (429)
Q Consensus       117 ~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~----~~i~~~~~~~---  186 (429)
                      ........   .....|++.|+|||++.+.++.++||||+|+++|+|++|..||.+.......    ..+......+   
T Consensus       181 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  260 (307)
T 2nru_A          181 RASEKFAQTVMTSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDY  260 (307)
T ss_dssp             EECCSCSSCEECSSCCSCGGGCCHHHHTTEECTHHHHHHHHHHHHHHHHCCCSBCTTBSSSBTTHHHHHHHTTSCCHHHH
T ss_pred             cccccccccccccccCCCcCcCChHHhcCCCCccchhHHHHHHHHHHHHCCCCcccCcchHHHHHHHHHhhhhhhhhhhh
Confidence            86643221   2345789999999999888899999999999999999999999765543322    2222211110   


Q ss_pred             ----CCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          187 ----RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       187 ----~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                          ........+..+.+++.+||+.||.+|||+.++++
T Consensus       261 ~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~  299 (307)
T 2nru_A          261 IDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQ  299 (307)
T ss_dssp             SCSSCSCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             ccccccccchHHHHHHHHHHHHHcCCCcccCcCHHHHHH
Confidence                01111234567899999999999999999999885

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.98  E-value=1.1e-32  Score=261.50  Aligned_cols=179  Identities=22%  Similarity=0.325  Sum_probs=142.0

Q ss_pred             cceeEeeecCCCChHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           38 RKLRRIRLCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      ..|+|||||.+|+|.+++...  .+..+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||.
T Consensus       104 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~---~~~~~kl~dfg~  180 (317)
T 2buj_A          104 EAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLG---DEGQPVLMDLGS  180 (317)
T ss_dssp             EEEEEEECCTTCBHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTSCEEECCCSS
T ss_pred             eeEEEEEeCCCCcHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEc---CCCCEEEEecCc
Confidence            346899999999999999664  346799999999999999999999999999999999999998   578899999998


Q ss_pred             ceeccCCCc----------ccccccCCcccccccccCC----CCCCcchHHHHHHHHHHhhCCCCCCCCC--hhHHHHHH
Q 014171          116 SDFIKPGKK----------FQDIVGSAYYVAPEVLKRK----SGPESDVWSIGVITYILLCGRRPFWDKT--EDGIFKEV  179 (429)
Q Consensus       116 a~~~~~~~~----------~~~~~g~~~y~aPE~~~~~----~~~~~DiwslG~il~~l~~g~~pf~~~~--~~~~~~~i  179 (429)
                      +........          .....|++.|+|||++.+.    ++.++||||+||++|+|++|+.||....  ....... 
T Consensus       181 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~-  259 (317)
T 2buj_A          181 MNQACIHVEGSRQALTLQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMVFQKGDSVALA-  259 (317)
T ss_dssp             CEESCEEEESHHHHHHHHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTHHHHHTTSCHHHH-
T ss_pred             chhcccccccccccccccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChhhhhcccchhhHH-
Confidence            875432111          1234579999999998643    4889999999999999999999995321  1112222 


Q ss_pred             HhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          180 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      .....  ..+..+.++..+.++|.+||+.||.+|||+.+++++
T Consensus       260 ~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~  300 (317)
T 2buj_A          260 VQNQL--SIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQ  300 (317)
T ss_dssp             HHCC----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hhccC--CCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHH
Confidence            22222  222335689999999999999999999999999975

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.98  E-value=5.6e-32  Score=257.66  Aligned_cols=185  Identities=19%  Similarity=0.229  Sum_probs=142.1

Q ss_pred             ccceeEeeecCCCChHHHHHhhcC--CCCCHHHHHHHHHHHHHHHHHHHHC---CCeecCCCCCcEEEeecCCCCCEEEe
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKD--SRYTEKDAAVVVRQMLRVAAECHLH---GLVHRDMKPENFLFKSAKEDSSLKAT  111 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~--~~l~~~~~~~i~~qil~aL~~lH~~---~i~H~dikp~Nil~~~~~~~~~~kL~  111 (429)
                      ...++|||||.||+|.+++.....  ..+++..+..++.|++.||.|||++   ||+||||||+||+++   .++.+||+
T Consensus       100 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~---~~~~~kl~  176 (326)
T 3uim_A          100 TERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLD---EEFEAVVG  176 (326)
T ss_dssp             SCCEEEEECCTTCBHHHHHHCCSTTCCCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEEC---TTCCEEEC
T ss_pred             CceEEEEEeccCCCHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEEC---CCCCEEec
Confidence            345789999999999999976532  3499999999999999999999999   999999999999998   57899999


Q ss_pred             ecccceeccCCC--cccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhhCCCCCCC----CChhHHHHHHHhcCC
Q 014171          112 DFGLSDFIKPGK--KFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWD----KTEDGIFKEVLRNKP  184 (429)
Q Consensus       112 Dfg~a~~~~~~~--~~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~----~~~~~~~~~i~~~~~  184 (429)
                      |||++.......  ......||+.|+|||++. +.++.++||||+||++|+|++|+.||..    ...............
T Consensus       177 Dfg~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~  256 (326)
T 3uim_A          177 DFGLAKLMDYKDTHVTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL  256 (326)
T ss_dssp             CCSSCEECCSSSSCEECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCHHHHTTTSCSBHHHHHTTTT
T ss_pred             cCccccccCcccccccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccccccccccchhHHHHHHHHh
Confidence            999998764332  234456899999999985 4568899999999999999999999942    111111111111111


Q ss_pred             C---C--------CCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCc
Q 014171          185 D---F--------RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW  224 (429)
Q Consensus       185 ~---~--------~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~  224 (429)
                      .   .        .....+..+..+.+++.+||+.||.+|||+.++++|-.
T Consensus       257 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~  307 (326)
T 3uim_A          257 KEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLE  307 (326)
T ss_dssp             SSCCSTTSSCTTCTTSCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHH
T ss_pred             hchhhhhhcChhhccccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhc
Confidence            0   0        00111122367899999999999999999999998765

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.97  E-value=8.7e-32  Score=254.48  Aligned_cols=180  Identities=22%  Similarity=0.381  Sum_probs=135.9

Q ss_pred             ccceeEeeecCCCChHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecc
Q 014171           37 LRKLRRIRLCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG  114 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg  114 (429)
                      ...++|||||.+|+|.+++...  ....+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||
T Consensus       105 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~---~~~~~kl~Dfg  181 (310)
T 2wqm_A          105 NELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT---ATGVVKLGDLG  181 (310)
T ss_dssp             TEEEEEEECCCSCBHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEECCC-
T ss_pred             CcEEEEEecCCCCCHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEc---CCCCEEEEecc
Confidence            3457899999999999998653  346799999999999999999999999999999999999998   57899999999


Q ss_pred             cceeccCCC-cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCCh--hHHHHHHHhcCCCCCCCC
Q 014171          115 LSDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTE--DGIFKEVLRNKPDFRRKP  190 (429)
Q Consensus       115 ~a~~~~~~~-~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~--~~~~~~i~~~~~~~~~~~  190 (429)
                      ++....... ......|++.|+|||++.+ .++.++||||+|+++|+|++|+.||.+...  ......+....  ++...
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~--~~~~~  259 (310)
T 2wqm_A          182 LGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMNLYSLCKKIEQCD--YPPLP  259 (310)
T ss_dssp             -----------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC---CCHHHHHHHHHTTC--SCCCC
T ss_pred             ceeeecCCCccccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccchhHHHHHHHhhccc--CCCCc
Confidence            987654332 2234578999999999865 458899999999999999999999976543  23344444332  23333


Q ss_pred             CCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          191 WPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       191 ~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ...+++++.++|.+||..||.+|||+.++++
T Consensus       260 ~~~~~~~l~~li~~~l~~dp~~Rps~~~il~  290 (310)
T 2wqm_A          260 SDHYSEELRQLVNMCINPDPEKRPDVTYVYD  290 (310)
T ss_dssp             TTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccccCHHHHHHHHHHcCCChhhCCCHHHHHH
Confidence            3568999999999999999999999999884

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.97  E-value=3.8e-32  Score=255.89  Aligned_cols=177  Identities=23%  Similarity=0.249  Sum_probs=141.5

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|||||.||+|.+++.... ..+++..+..++.|++.||.|||++||+||||||+||+++.   ++.+||+|||.+..
T Consensus       100 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~---~~~~kl~Dfg~~~~  175 (302)
T 4e5w_A          100 IKLIMEFLPSGSLKEYLPKNK-NKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVES---EHQVKIGDFGLTKA  175 (302)
T ss_dssp             EEEEEECCTTCBHHHHHHHHT-TTCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE---TTEEEECCCTTCEE
T ss_pred             EEEEEEeCCCCcHHHHHHhcc-ccCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcC---CCCEEECccccccc
Confidence            468999999999999986553 57999999999999999999999999999999999999984   77899999999987


Q ss_pred             ccCCCc----ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCC--------------ChhHHHHHH
Q 014171          119 IKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDK--------------TEDGIFKEV  179 (429)
Q Consensus       119 ~~~~~~----~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~--------------~~~~~~~~i  179 (429)
                      ......    .....||..|+|||++.+ .++.++||||+|+++|+|++|..|+...              .........
T Consensus       176 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  255 (302)
T 4e5w_A          176 IETDKEYYTVKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQMTVTRLVNT  255 (302)
T ss_dssp             CCTTCCEEECCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCGGGHHHHHHHH
T ss_pred             ccCCCcceeccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccCCCcchhhHHhhccCCcccccCHHHHHHH
Confidence            754432    234567888999998864 4578999999999999999999875321              111112222


Q ss_pred             HhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          180 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      .....  ..+..+.+++.+.++|.+||+.||.+|||+.++++
T Consensus       256 ~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~  295 (302)
T 4e5w_A          256 LKEGK--RLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIE  295 (302)
T ss_dssp             HHTTC--CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHH
T ss_pred             HhccC--CCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHH
Confidence            22222  22233578999999999999999999999999874

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.97  E-value=3.7e-32  Score=257.92  Aligned_cols=178  Identities=19%  Similarity=0.280  Sum_probs=145.0

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...++|||||.||+|.+++... +..+++..+..++.||+.||.|||++||+||||||+||+++    ++.+||+|||++
T Consensus       102 ~~~~iv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~----~~~~~l~Dfg~~  176 (319)
T 2y4i_B          102 PHLAIITSLCKGRTLYSVVRDA-KIVLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD----NGKVVITDFGLF  176 (319)
T ss_dssp             SCEEEECBCCCSEEHHHHTTSS-CCCCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC------CCEECCCSCC
T ss_pred             CceEEEeecccCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe----CCCEEEeecCCc
Confidence            3457899999999999988543 35799999999999999999999999999999999999997    568999999998


Q ss_pred             eeccC------CCcccccccCCcccccccccC----------CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHH
Q 014171          117 DFIKP------GKKFQDIVGSAYYVAPEVLKR----------KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL  180 (429)
Q Consensus       117 ~~~~~------~~~~~~~~g~~~y~aPE~~~~----------~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~  180 (429)
                      .....      ........|++.|+|||++.+          .++.++||||+||++|+|++|+.||.+.........+.
T Consensus       177 ~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~  256 (319)
T 2y4i_B          177 SISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMG  256 (319)
T ss_dssp             C----------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHH
T ss_pred             cccccccccccccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhc
Confidence            65431      122234468899999999863          34778999999999999999999999888887777776


Q ss_pred             hcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          181 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      .+....  .....++.++.++|.+||..||.+|||+.++++
T Consensus       257 ~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~  295 (319)
T 2y4i_B          257 TGMKPN--LSQIGMGKEISDILLFCWAFEQEERPTFTKLMD  295 (319)
T ss_dssp             TTCCCC--CCCSSCCTTHHHHHHHHHCSSTTTSCCHHHHHH
T ss_pred             cCCCCC--CCcCCCCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            654322  222357889999999999999999999999985

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.97  E-value=5.4e-32  Score=278.67  Aligned_cols=194  Identities=18%  Similarity=0.235  Sum_probs=154.8

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG   86 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~   86 (429)
                      +.++|+|++++++++..             ...|+|||||.||+|.+++... ...+++..+..++.||+.||.|||++|
T Consensus       391 ~~l~hpniv~l~~~~~~-------------~~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~~L~~LH~~~  456 (613)
T 2ozo_A          391 HQLDNPYIVRLIGVCQA-------------EALMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKN  456 (613)
T ss_dssp             TTCCCTTBCCEEEEEES-------------SSEEEEEECCTTCBHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HhCCCCCEeeEEEEecc-------------CCeEEEEEeCCCCcHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34556666665554431             2246899999999999988543 467999999999999999999999999


Q ss_pred             CeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc----ccccccCCccccccccc-CCCCCCcchHHHHHHHHHHh
Q 014171           87 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILL  161 (429)
Q Consensus        87 i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~----~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~  161 (429)
                      |+||||||+|||++   .++.+||+|||+++.......    .....+++.|+|||++. +.++.++||||+||++|+|+
T Consensus       457 iiHrDlkp~NILl~---~~~~vkL~DFGla~~~~~~~~~~~~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ell  533 (613)
T 2ozo_A          457 FVHRNLAARNVLLV---NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEAL  533 (613)
T ss_dssp             CCCSCCSGGGEEEE---ETTEEEECCCSTTTTCC--------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred             EEcCcCCHHHEEEc---CCCcEEEeeccCcccccCCCceeeeccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHH
Confidence            99999999999999   478999999999986643221    12234567899999986 56789999999999999999


Q ss_pred             h-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHh
Q 014171          162 C-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL  220 (429)
Q Consensus       162 ~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l  220 (429)
                      + |+.||.+.+..+....+..+...   ...+.+++++.++|.+||..||.+||++.+++
T Consensus       534 t~G~~Pf~~~~~~~~~~~i~~~~~~---~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~  590 (613)
T 2ozo_A          534 SYGQKPYKKMKGPEVMAFIEQGKRM---ECPPECPPELYALMSDCWIYKWEDRPDFLTVE  590 (613)
T ss_dssp             TTSCCTTTTCCSHHHHHHHHTTCCC---CCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHH
T ss_pred             HCCCCCCCCCCHHHHHHHHHcCCCC---CCCCcCCHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            8 99999998888888777766432   22346899999999999999999999999875

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.97  E-value=3.7e-32  Score=280.64  Aligned_cols=175  Identities=20%  Similarity=0.250  Sum_probs=146.7

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .++|||||.||+|.+++...  ..+++..+..++.||+.||.|||++||+||||||+|||++.   ++.+||+|||+|+.
T Consensus       444 ~~lv~E~~~~g~L~~~l~~~--~~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~---~~~~kL~DFGla~~  518 (635)
T 4fl3_A          444 WMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVT---QHYAKISDFGLSKA  518 (635)
T ss_dssp             EEEEEECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE---TTEEEECCTTHHHH
T ss_pred             EEEEEEccCCCCHHHHHhhC--CCCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeC---CCCEEEEEcCCccc
Confidence            46899999999999999544  67999999999999999999999999999999999999994   77899999999986


Q ss_pred             ccCCCc----ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCC
Q 014171          119 IKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWP  192 (429)
Q Consensus       119 ~~~~~~----~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  192 (429)
                      ......    .....+++.|+|||++.+ .++.++||||+||++|+|++ |+.||.+....+....+..+...   ....
T Consensus       519 ~~~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~---~~p~  595 (635)
T 4fl3_A          519 LRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERM---GCPA  595 (635)
T ss_dssp             TTC-------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCC---CCCT
T ss_pred             cccCccccccccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC---CCCC
Confidence            643322    223346788999999874 57889999999999999998 99999999888888777766532   2234


Q ss_pred             CCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          193 SISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       193 ~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      .++.++.+||.+||+.||.+|||++++++
T Consensus       596 ~~~~~l~~li~~cl~~dP~~RPs~~~l~~  624 (635)
T 4fl3_A          596 GCPREMYDLMNLCWTYDVENRPGFAAVEL  624 (635)
T ss_dssp             TCCHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             CCCHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence            68999999999999999999999999863

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.97  E-value=1.2e-31  Score=253.33  Aligned_cols=175  Identities=26%  Similarity=0.387  Sum_probs=136.0

Q ss_pred             ceeEeeecCCCChHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHH---CCCeecCCCCCcEEEeecCCCC-CEEEeec
Q 014171           39 KLRRIRLCEGGELLDRILAKKD-SRYTEKDAAVVVRQMLRVAAECHL---HGLVHRDMKPENFLFKSAKEDS-SLKATDF  113 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~qil~aL~~lH~---~~i~H~dikp~Nil~~~~~~~~-~~kL~Df  113 (429)
                      .|+|||||+||+|.+++..... ..+++..+..++.|++.||.|||+   +||+||||||+||+++.   ++ .+||+||
T Consensus        74 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~---~~~~~kl~Df  150 (307)
T 2eva_A           74 VCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVA---GGTVLKICDF  150 (307)
T ss_dssp             TEEEEECCTTCBHHHHHHCSSSEECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEET---TTTEEEECCC
T ss_pred             cEEEEEcCCCCCHHHHHhccCCCCccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeC---CCCEEEEccc
Confidence            5789999999999999965422 247899999999999999999999   89999999999999983   44 4899999


Q ss_pred             ccceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhH--HHHHHHhcCCCCCCCC
Q 014171          114 GLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDG--IFKEVLRNKPDFRRKP  190 (429)
Q Consensus       114 g~a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--~~~~i~~~~~~~~~~~  190 (429)
                      |++......  .....||+.|+|||++.+ .++.++||||+|+++|+|++|+.||.......  ....+..+.   ....
T Consensus       151 g~~~~~~~~--~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~---~~~~  225 (307)
T 2eva_A          151 GTACDIQTH--MTNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGT---RPPL  225 (307)
T ss_dssp             CC--------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTTCSSHHHHHHHHHTTC---CCCC
T ss_pred             ccccccccc--cccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhhCccHHHHHHHHhcCC---CCCc
Confidence            999765432  234468999999999875 46889999999999999999999997654332  222333322   2223


Q ss_pred             CCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          191 WPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       191 ~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ...++..+.++|.+||+.||.+|||++++++
T Consensus       226 ~~~~~~~l~~li~~~l~~dp~~Rps~~ell~  256 (307)
T 2eva_A          226 IKNLPKPIESLMTRCWSKDPSQRPSMEEIVK  256 (307)
T ss_dssp             BTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccccCHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            4568999999999999999999999999986

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.97  E-value=8.7e-33  Score=270.50  Aligned_cols=183  Identities=23%  Similarity=0.383  Sum_probs=144.6

Q ss_pred             ceeEeeecCCCChHHHHHhhcC-CCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeec-CCCCCEEEeecccc
Q 014171           39 KLRRIRLCEGGELLDRILAKKD-SRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA-KEDSSLKATDFGLS  116 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~-~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~-~~~~~~kL~Dfg~a  116 (429)
                      .|+|||||.||+|.+++..... ..+++..+..++.||+.||.|||++||+||||||+||++... ...+.+||+|||++
T Consensus        84 ~~lv~e~~~~g~L~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a  163 (396)
T 4eut_A           84 KVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAA  163 (396)
T ss_dssp             EEEEECCCTTEEHHHHTTSGGGTTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGC
T ss_pred             eEEEEecCCCCCHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCc
Confidence            4689999999999999865432 339999999999999999999999999999999999998321 14567999999999


Q ss_pred             eeccCCCcccccccCCcccccccccC---------CCCCCcchHHHHHHHHHHhhCCCCCCCC----ChhHHHHHHHhcC
Q 014171          117 DFIKPGKKFQDIVGSAYYVAPEVLKR---------KSGPESDVWSIGVITYILLCGRRPFWDK----TEDGIFKEVLRNK  183 (429)
Q Consensus       117 ~~~~~~~~~~~~~g~~~y~aPE~~~~---------~~~~~~DiwslG~il~~l~~g~~pf~~~----~~~~~~~~i~~~~  183 (429)
                      .............||+.|+|||++.+         .++.++||||+||++|+|++|+.||...    ........+..+.
T Consensus       164 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~~~  243 (396)
T 4eut_A          164 RELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIITGK  243 (396)
T ss_dssp             EECCCGGGSSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHHSC
T ss_pred             eEccCCCccccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhcCC
Confidence            88766655566789999999999853         3467899999999999999999999643    2344555565554


Q ss_pred             CCCCC-----------------C----CCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          184 PDFRR-----------------K----PWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       184 ~~~~~-----------------~----~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      +....                 +    ....++..+.++|.+||+.||.+|||++++++
T Consensus       244 p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~dP~~R~s~~e~l~  302 (396)
T 4eut_A          244 PSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEADQEKCWGFDQFFA  302 (396)
T ss_dssp             CTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCCCTTTSCCHHHHHH
T ss_pred             CcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhccChhhhccHHHHHH
Confidence            32100                 0    01123457889999999999999999998854

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.97  E-value=3.5e-32  Score=260.14  Aligned_cols=185  Identities=22%  Similarity=0.309  Sum_probs=137.9

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC---------CCeecCCCCCcEEEeecCCCCCEE
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH---------GLVHRDMKPENFLFKSAKEDSSLK  109 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~---------~i~H~dikp~Nil~~~~~~~~~~k  109 (429)
                      .|+|||||+||+|.+++...   ..++..+..++.||+.||.|||++         ||+||||||+||+++   .++.+|
T Consensus        87 ~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~---~~~~~k  160 (336)
T 3g2f_A           87 YLLVMEYYPNGSLXKYLSLH---TSDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVK---NDGTCV  160 (336)
T ss_dssp             EEEEECCCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEEC---TTSCEE
T ss_pred             EEEEEecCCCCcHHHHHhhc---ccchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEc---CCCcEE
Confidence            36899999999999999554   468999999999999999999999         999999999999998   578999


Q ss_pred             EeecccceeccCCC---------cccccccCCcccccccccC--------CCCCCcchHHHHHHHHHHhhCCCCCCCCCh
Q 014171          110 ATDFGLSDFIKPGK---------KFQDIVGSAYYVAPEVLKR--------KSGPESDVWSIGVITYILLCGRRPFWDKTE  172 (429)
Q Consensus       110 L~Dfg~a~~~~~~~---------~~~~~~g~~~y~aPE~~~~--------~~~~~~DiwslG~il~~l~~g~~pf~~~~~  172 (429)
                      |+|||++.......         ......||+.|+|||++.+        .++.++||||+||++|+|++|..||.....
T Consensus       161 L~DFG~a~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~  240 (336)
T 3g2f_A          161 ISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGES  240 (336)
T ss_dssp             ECCCTTCEECSSSSCC---------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGGSTTSC
T ss_pred             EeeccceeecccccccCccccccccccCCCccceeCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcCCCccc
Confidence            99999998764321         1234578999999999875        235689999999999999999777643221


Q ss_pred             -----------------hHHHHHHHhcCCCCC--CCCCC---CCCHHHHHHHHHhccCCccCcCCHHHHh------CCCc
Q 014171          173 -----------------DGIFKEVLRNKPDFR--RKPWP---SISNSAKDFVKKLLVKDPRARLTAAQAL------SHPW  224 (429)
Q Consensus       173 -----------------~~~~~~i~~~~~~~~--~~~~~---~~~~~~~~li~~~l~~dp~~R~s~~e~l------~h~~  224 (429)
                                       ..............+  +..++   .+++.+.+||.+||+.||.+|||+++++      .++|
T Consensus       241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~e~l~~L~~ll~~~  320 (336)
T 3g2f_A          241 VPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQDAEARLTAQXAEERMAELMMIW  320 (336)
T ss_dssp             CCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHHCC
T ss_pred             hhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCChhhCcchHHHHHHHHHHHHHH
Confidence                             011111111111111  11111   1345799999999999999999999994      4678


Q ss_pred             cccCC
Q 014171          225 VREGG  229 (429)
Q Consensus       225 ~~~~~  229 (429)
                      -++..
T Consensus       321 ~~~~~  325 (336)
T 3g2f_A          321 ERNKS  325 (336)
T ss_dssp             CC---
T ss_pred             Hhccc
Confidence            76653

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=1.1e-31  Score=256.74  Aligned_cols=177  Identities=21%  Similarity=0.289  Sum_probs=136.1

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC--------CCeecCCCCCcEEEeecCCCCCEEE
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH--------GLVHRDMKPENFLFKSAKEDSSLKA  110 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~--------~i~H~dikp~Nil~~~~~~~~~~kL  110 (429)
                      .|+|||||.||+|.+++..   ..+++..+..++.|++.||.|||++        ||+||||||+||+++   .++.+||
T Consensus       110 ~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~---~~~~~kl  183 (337)
T 3mdy_A          110 LYLITDYHENGSLYDYLKS---TTLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVK---KNGTCCI  183 (337)
T ss_dssp             EEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEEC---TTSCEEE
T ss_pred             eEEEEeccCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEEC---CCCCEEE
Confidence            4689999999999999954   3699999999999999999999999        999999999999998   5789999


Q ss_pred             eecccceeccCCCcc-----cccccCCcccccccccCCC-CCC------cchHHHHHHHHHHhhC----------CCCCC
Q 014171          111 TDFGLSDFIKPGKKF-----QDIVGSAYYVAPEVLKRKS-GPE------SDVWSIGVITYILLCG----------RRPFW  168 (429)
Q Consensus       111 ~Dfg~a~~~~~~~~~-----~~~~g~~~y~aPE~~~~~~-~~~------~DiwslG~il~~l~~g----------~~pf~  168 (429)
                      +|||++.........     ....||+.|+|||++.+.. +..      +||||+||++|+|++|          ..||.
T Consensus       184 ~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~  263 (337)
T 3mdy_A          184 ADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYH  263 (337)
T ss_dssp             CCCTTCEECC---------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTT
T ss_pred             EeCCCceeeccccccccCCCCCCccCcceeChhhcccccCCccccCccccchHHHHHHHHHHHhccCcccccccccccHh
Confidence            999999766433221     3457999999999997543 333      8999999999999999          77775


Q ss_pred             CCCh----hHHHHHHHhcCCCCCCCCC-----CCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          169 DKTE----DGIFKEVLRNKPDFRRKPW-----PSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       169 ~~~~----~~~~~~i~~~~~~~~~~~~-----~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      ....    ............ ..+...     ..+++.+.++|.+||+.||.+|||+.+++++
T Consensus       264 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~  325 (337)
T 3mdy_A          264 DLVPSDPSYEDMREIVCIKK-LRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKT  325 (337)
T ss_dssp             TTSCSSCCHHHHHHHHTTSC-CCCCCCGGGGGSHHHHHHHHHHHHHSCSSGGGSCCHHHHHHH
T ss_pred             hhcCCCCchhhhHHHHhhhc-cCccccccchhhHHHHHHHHHHHHhhhhChhhCCCHHHHHHH
Confidence            4322    122222222111 111111     1345679999999999999999999999854

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.97  E-value=6e-32  Score=257.65  Aligned_cols=177  Identities=21%  Similarity=0.287  Sum_probs=142.6

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|||||.||+|.+++.... ..+++..+..++.||+.||.|||++||+||||||+||+++.   ++.+||+|||.+..
T Consensus       101 ~~lv~e~~~~~~L~~~l~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~---~~~~kl~Dfg~~~~  176 (327)
T 3lxl_A          101 LRLVMEYLPSGCLRDFLQRHR-ARLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVES---EAHVKIADFGLAKL  176 (327)
T ss_dssp             EEEEEECCTTCBHHHHHHHHG-GGCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEE---TTEEEECCGGGCEE
T ss_pred             EEEEEeecCCCCHHHHHHhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECC---CCCEEEccccccee
Confidence            468999999999999997643 46999999999999999999999999999999999999984   78899999999987


Q ss_pred             ccCCCc----ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChh--------------HHHHHH
Q 014171          119 IKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED--------------GIFKEV  179 (429)
Q Consensus       119 ~~~~~~----~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--------------~~~~~i  179 (429)
                      ......    .....|++.|+|||++.+ .++.++||||+|+++|+|++|..||......              ......
T Consensus       177 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (327)
T 3lxl_A          177 LPLDKDYYVVREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVPALSRLLEL  256 (327)
T ss_dssp             CCTTCSEEECSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHCC----CCHHHHHHHH
T ss_pred             cccCCccceeeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCCCccccchhhhhcccccccccHHHHHHH
Confidence            654332    233457888999999865 4588999999999999999999998654322              111122


Q ss_pred             HhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          180 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      .....  .....+.+++.+.++|.+||+.||.+|||+.++++
T Consensus       257 ~~~~~--~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~  296 (327)
T 3lxl_A          257 LEEGQ--RLPAPPACPAEVHELMKLCWAPSPQDRPSFSALGP  296 (327)
T ss_dssp             HHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             hhccc--CCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            22222  22233568999999999999999999999999964

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.97  E-value=4.1e-32  Score=275.60  Aligned_cols=185  Identities=23%  Similarity=0.263  Sum_probs=153.4

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.+|+|.+++....+..+++..+..++.||+.||.|||++||+||||||+|||++   .++.+||+|||+++
T Consensus       335 ~~~lv~e~~~~gsL~~~l~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~---~~~~~kl~DFG~a~  411 (535)
T 2h8h_A          335 PIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVG---ENLVCKVADFGLAR  411 (535)
T ss_dssp             SCEEEECCCTTEEHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEC---GGGCEEECCTTSTT
T ss_pred             cceEeeehhcCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEc---CCCcEEEcccccce
Confidence            357899999999999999665446799999999999999999999999999999999999998   47899999999997


Q ss_pred             eccCCCc--ccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          118 FIKPGKK--FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       118 ~~~~~~~--~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      .......  .....++..|+|||++. +.++.++||||+||++|+|++ |+.||.+....+....+..+..   .+....
T Consensus       412 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~---~~~~~~  488 (535)
T 2h8h_A          412 LIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYR---MPCPPE  488 (535)
T ss_dssp             TCCCHHHHTTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCC---CCCCTT
T ss_pred             ecCCCceecccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCC---CCCCCC
Confidence            6543211  12334677899999886 456889999999999999999 9999999888888777765532   122346


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhCC--CccccC
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALSH--PWVREG  228 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~h--~~~~~~  228 (429)
                      ++..+.+||.+||+.||.+|||++++++.  .++...
T Consensus       489 ~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~  525 (535)
T 2h8h_A          489 CPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTST  525 (535)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCC
T ss_pred             CCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhcc
Confidence            89999999999999999999999998763  555443

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.97  E-value=2.4e-31  Score=275.64  Aligned_cols=177  Identities=22%  Similarity=0.323  Sum_probs=147.4

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++.   ++.+||+|||++.
T Consensus       464 ~~~lv~E~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~---~~~vkL~DFG~a~  539 (656)
T 2j0j_A          464 PVWIIMELCTLGELRSFLQVR-KFSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS---NDCVKLGDFGLSR  539 (656)
T ss_dssp             SCEEEEECCTTCBHHHHHHHT-TTTCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEE---TTEEEECCCCCCC
T ss_pred             ceEEEEEcCCCCcHHHHHHhc-cCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeC---CCCEEEEecCCCe
Confidence            356899999999999998654 357999999999999999999999999999999999999994   7899999999998


Q ss_pred             eccCCCcc--cccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          118 FIKPGKKF--QDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       118 ~~~~~~~~--~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      ........  ....+++.|+|||++. ..++.++||||+||++|+|++ |..||.+.........+..+...   +..+.
T Consensus       540 ~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~---~~~~~  616 (656)
T 2j0j_A          540 YMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERL---PMPPN  616 (656)
T ss_dssp             SCCC----------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCC---CCCTT
T ss_pred             ecCCCcceeccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCC---CCCcc
Confidence            76543321  2345678999999986 456889999999999999997 99999998888888777766432   22356


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      +++.+.++|.+||..||.+|||+.++++
T Consensus       617 ~~~~l~~li~~~l~~dP~~RPs~~el~~  644 (656)
T 2j0j_A          617 CPPTLYSLMTKCWAYDPSRRPRFTELKA  644 (656)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            8999999999999999999999999873

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.97  E-value=1.8e-32  Score=269.53  Aligned_cols=175  Identities=18%  Similarity=0.222  Sum_probs=142.8

Q ss_pred             ceeEeeecCCCChHHHHH-----hhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeec
Q 014171           39 KLRRIRLCEGGELLDRIL-----AKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDF  113 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~-----~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Df  113 (429)
                      .+++|+++ +|+|.+++.     ...+..+++..+..++.||+.||.|||++||+||||||+|||++   .++.+||+||
T Consensus       180 ~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~NILl~---~~~~~kL~DF  255 (413)
T 3dzo_A          180 RFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVDIVLD---QRGGVFLTGF  255 (413)
T ss_dssp             EEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TTCCEEECCG
T ss_pred             eEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccceEEEe---cCCeEEEEec
Confidence            35566665 589998884     22235588889999999999999999999999999999999999   5778999999


Q ss_pred             ccceeccCCCcccccccCCccccccccc----------C-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhc
Q 014171          114 GLSDFIKPGKKFQDIVGSAYYVAPEVLK----------R-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRN  182 (429)
Q Consensus       114 g~a~~~~~~~~~~~~~g~~~y~aPE~~~----------~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~  182 (429)
                      |+++.....  ....+| +.|+|||++.          + .++.++||||+||++|+|++|+.||.+.........+.. 
T Consensus       256 G~a~~~~~~--~~~~~g-~~y~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~~~~-  331 (413)
T 3dzo_A          256 EHLVRDGAS--AVSPIG-RGFAPPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEWIFR-  331 (413)
T ss_dssp             GGCEETTEE--ECCCCC-TTTCCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGGGGS-
T ss_pred             cceeecCCc--cccCCC-CceeCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHHHHh-
Confidence            998865433  345577 9999999983          2 247799999999999999999999987665443333322 


Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          183 KPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       183 ~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                             .+..+++.+++||.+||+.||.+|||+.++++||||+..
T Consensus       332 -------~~~~~~~~~~~li~~~l~~dP~~Rpt~~~~l~~~~~~~~  370 (413)
T 3dzo_A          332 -------SCKNIPQPVRALLEGFLRYPKEDRLLPLQAMETPEYEQL  370 (413)
T ss_dssp             -------SCCCCCHHHHHHHHHHTCSSGGGSCCHHHHTTSHHHHHH
T ss_pred             -------hcccCCHHHHHHHHHHccCChhhCcCHHHHHhCHHHHHH
Confidence                   223678999999999999999999999999999999764

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.97  E-value=1.4e-31  Score=267.23  Aligned_cols=183  Identities=16%  Similarity=0.213  Sum_probs=145.3

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+||||| ||+|.+++... ...+++..+..++.||+.||.|||++||+||||||+|||++.....+.+||+|||++
T Consensus        76 ~~~~lvme~~-g~sL~~ll~~~-~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla  153 (483)
T 3sv0_A           76 DYNVLVMDLL-GPSLEDLFNFC-SRKLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLA  153 (483)
T ss_dssp             TEEEEEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTC
T ss_pred             CEEEEEEECC-CCCHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcc
Confidence            3457999999 99999988643 367999999999999999999999999999999999999953335789999999999


Q ss_pred             eeccCCCc--------ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChh---HHHHHHHhcCC
Q 014171          117 DFIKPGKK--------FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED---GIFKEVLRNKP  184 (429)
Q Consensus       117 ~~~~~~~~--------~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~---~~~~~i~~~~~  184 (429)
                      +.......        .....||+.|+|||++.+ .++.++|||||||++|+|++|+.||.+....   ..+..+.....
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~~~~~~~~~~~~~i~~~~~  233 (483)
T 3sv0_A          154 KKYRDTSTHQHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKV  233 (483)
T ss_dssp             EECBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCCSSHHHHHHHHHHHHH
T ss_pred             eeccCCccccccccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccchhHHHHHHHHhhccc
Confidence            87654332        125679999999999875 4588999999999999999999999875442   22333322211


Q ss_pred             C-CCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          185 D-FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       185 ~-~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      . ........++.++.+||.+||..+|.+||+++++++
T Consensus       234 ~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~  271 (483)
T 3sv0_A          234 ATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKR  271 (483)
T ss_dssp             HSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHH
T ss_pred             cccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHH
Confidence            1 011111357899999999999999999999998764

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.97  E-value=8.8e-32  Score=257.06  Aligned_cols=201  Identities=21%  Similarity=0.354  Sum_probs=134.2

Q ss_pred             ccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhh-cCCCCCHHHHHHHHHHHHHHHHHHHHCC--
Q 014171           10 RSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAK-KDSRYTEKDAAVVVRQMLRVAAECHLHG--   86 (429)
Q Consensus        10 ~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~-~~~~l~~~~~~~i~~qil~aL~~lH~~~--   86 (429)
                      +|+|++.+++.+........    ......++|||||. |+|.+++... ..+.+++..+..++.||+.||.|||++|  
T Consensus        84 ~h~~iv~~~~~~~~~~~~~~----~~~~~~~lv~e~~~-g~L~~~l~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~~~  158 (337)
T 3ll6_A           84 GHPNIVQFCSAASIGKEESD----TGQAEFLLLTELCK-GQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPP  158 (337)
T ss_dssp             TSTTBCCEEEEEEECTTTST----TSSEEEEEEEECCS-EEHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHTSSSC
T ss_pred             cCCChhhccccccccccccc----cCCceEEEEEEecC-CCHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhCCCC
Confidence            36776666665532111100    01122467999996 7999988653 3457999999999999999999999999  


Q ss_pred             CeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcc-------------cccccCCccccccccc----CCCCCCcc
Q 014171           87 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF-------------QDIVGSAYYVAPEVLK----RKSGPESD  149 (429)
Q Consensus        87 i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~-------------~~~~g~~~y~aPE~~~----~~~~~~~D  149 (429)
                      |+||||||+||+++   .++.+||+|||++.........             ....||+.|+|||++.    ..++.++|
T Consensus       159 ivH~Dikp~NIl~~---~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~D  235 (337)
T 3ll6_A          159 IIHRDLKVENLLLS---NQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQD  235 (337)
T ss_dssp             CBCCCCCGGGCEEC---TTSCEEBCCCTTCBCCSSCC-------------------------------CCTTSCSSHHHH
T ss_pred             EEEccCCcccEEEC---CCCCEEEecCccceeccccCcccccccccccchhhccccCCCCcCChhhhhccccCCCChHHh
Confidence            99999999999998   5789999999999876543221             1446899999999983    24578999


Q ss_pred             hHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCc
Q 014171          150 VWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW  224 (429)
Q Consensus       150 iwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~  224 (429)
                      |||+||++|+|++|+.||.+.......    ......  +.....+..+.+||.+||+.||.+|||+.+++++-+
T Consensus       236 v~slG~il~el~~g~~p~~~~~~~~~~----~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~  304 (337)
T 3ll6_A          236 IWALGCILYLLCFRQHPFEDGAKLRIV----NGKYSI--PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQ  304 (337)
T ss_dssp             HHHHHHHHHHHHHSSCCC----------------CCC--CTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCcchhHHHhh----cCcccC--CcccccchHHHHHHHHHccCChhhCcCHHHHHHHHH
Confidence            999999999999999999765443322    222222  223456788999999999999999999999997743

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.97  E-value=1.7e-31  Score=253.65  Aligned_cols=174  Identities=24%  Similarity=0.263  Sum_probs=139.9

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|||||.+|+|.+++...   .+++..+..++.||+.||.|||++||+||||||+||+++   .++.+||+|||++..
T Consensus       110 ~~lv~e~~~~~~L~~~l~~~---~~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~---~~~~~kl~Dfg~a~~  183 (318)
T 3lxp_A          110 LQLVMEYVPLGSLRDYLPRH---SIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLD---NDRLVKIGDFGLAKA  183 (318)
T ss_dssp             EEEEECCCTTCBHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTCCEEECCGGGCEE
T ss_pred             EEEEEecccCCcHHHHHhhC---CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEc---CCCCEEECCcccccc
Confidence            46899999999999988443   599999999999999999999999999999999999998   578999999999987


Q ss_pred             ccCCCc----ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhH--------------HHHHH
Q 014171          119 IKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDG--------------IFKEV  179 (429)
Q Consensus       119 ~~~~~~----~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~--------------~~~~i  179 (429)
                      ......    .....+++.|+|||++.+ .++.++||||+|+++|+|++|..||.......              .....
T Consensus       184 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  263 (318)
T 3lxp_A          184 VPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIGIAQGQMTVLRLTEL  263 (318)
T ss_dssp             CCTTCSEEEC---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCGGGSHHHHHHHHHCSCCHHHHHHHHHHH
T ss_pred             ccccccccccccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCCCcccccchhhhhhhcccccchhHHHHHHH
Confidence            754432    234467888999999865 45789999999999999999999986532210              11112


Q ss_pred             HhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHh
Q 014171          180 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL  220 (429)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l  220 (429)
                      .....  ..+....++..+.+||.+||+.||.+|||+.+++
T Consensus       264 ~~~~~--~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell  302 (318)
T 3lxp_A          264 LERGE--RLPRPDKCPAEVYHLMKNCWETEASFRPTFENLI  302 (318)
T ss_dssp             HHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             Hhccc--CCCCCccccHHHHHHHHHHcCCCcccCcCHHHHH
Confidence            22221  2223356899999999999999999999999997

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.97  E-value=1.2e-31  Score=259.52  Aligned_cols=179  Identities=20%  Similarity=0.217  Sum_probs=139.4

Q ss_pred             cccceeEeeecCCCChHHHHHhh---cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEee--------cCC
Q 014171           36 PLRKLRRIRLCEGGELLDRILAK---KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKS--------AKE  104 (429)
Q Consensus        36 ~~~~~lv~e~~~gg~L~~~l~~~---~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~--------~~~  104 (429)
                      ....|+|||||.||+|.+++...   ....+++..+..++.||+.||.|||++||+||||||+|||++.        ...
T Consensus       139 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~  218 (365)
T 3e7e_A          139 QNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDL  218 (365)
T ss_dssp             SSCEEEEECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------
T ss_pred             CCCcEEEEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccc
Confidence            34557899999999999999753   2467999999999999999999999999999999999999984        122


Q ss_pred             CCCEEEeecccceecc---CCCcccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHH
Q 014171          105 DSSLKATDFGLSDFIK---PGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL  180 (429)
Q Consensus       105 ~~~~kL~Dfg~a~~~~---~~~~~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~  180 (429)
                      .+.+||+|||+|+...   ........+||+.|+|||++.+. ++.++||||+||++|+|++|+.||.........    
T Consensus       219 ~~~~kl~DFG~a~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~----  294 (365)
T 3e7e_A          219 SAGLALIDLGQSIDMKLFPKGTIFTAKCETSGFQCVEMLSNKPWNYQIDYFGVAATVYCMLFGTYMKVKNEGGECK----  294 (365)
T ss_dssp             CTTEEECCCTTCEEGGGSCTTEEECCSSCTTSCCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCCCEEEETTEEE----
T ss_pred             cCCEEEeeCchhhhhhccCCCceeeeecCCCCCCChHHhcCCCCCccccHHHHHHHHHHHHhCCCccccCCCCcee----
Confidence            6899999999997653   22334566899999999999764 589999999999999999999999654321100    


Q ss_pred             hcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          181 RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       181 ~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                       ....+..   ...++.+.+++.+||+.+|.+|++..+.+.+
T Consensus       295 -~~~~~~~---~~~~~~~~~~~~~~l~~~p~~r~~~~~~l~~  332 (365)
T 3e7e_A          295 -PEGLFRR---LPHLDMWNEFFHVMLNIPDCHHLPSLDLLRQ  332 (365)
T ss_dssp             -ECSCCTT---CSSHHHHHHHHHHHHCCCCTTCCCCHHHHHH
T ss_pred             -echhccc---cCcHHHHHHHHHHHcCCCCCCcchHHHHHHH
Confidence             0111111   1246789999999999999999654444443

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.97  E-value=3.7e-31  Score=252.10  Aligned_cols=178  Identities=19%  Similarity=0.223  Sum_probs=141.1

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..++|||||+||+|.+++... ...+++..+..++.||+.||.|||++||+||||||+||+++.   ++.+||+|||++.
T Consensus       118 ~~~lv~e~~~~~~L~~~l~~~-~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~---~~~~kL~Dfg~~~  193 (326)
T 2w1i_A          118 NLKLIMEYLPYGSLRDYLQKH-KERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVEN---ENRVKIGDFGLTK  193 (326)
T ss_dssp             CCEEEECCCTTCBHHHHHHHS-TTSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEE---TTEEEECCCTTCE
T ss_pred             ceEEEEECCCCCCHHHHHHhc-ccCCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcC---CCcEEEecCcchh
Confidence            346899999999999998654 356999999999999999999999999999999999999994   7889999999998


Q ss_pred             eccCCCc----ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChh------------H---HHH
Q 014171          118 FIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTED------------G---IFK  177 (429)
Q Consensus       118 ~~~~~~~----~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~------------~---~~~  177 (429)
                      .......    .....++..|+|||++.+ .++.++||||+|+++|+|++|..||......            .   ...
T Consensus       194 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  273 (326)
T 2w1i_A          194 VLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGNDKQGQMIVFHLI  273 (326)
T ss_dssp             ECCSSCSEEECSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTCGGGSHHHHHHHHHCTTCCTHHHHHHHH
T ss_pred             hccccccccccccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCCCCCCCHHHHHHhhccccchhhhHHHHH
Confidence            7654332    123456778999999864 4588999999999999999999998532110            0   011


Q ss_pred             HHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          178 EVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       178 ~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      .........  +....++.++.++|.+||+.||.+|||+.++++
T Consensus       274 ~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~  315 (326)
T 2w1i_A          274 ELLKNNGRL--PRPDGCPDEIYMIMTECWNNNVNQRPSFRDLAL  315 (326)
T ss_dssp             HHHHTTCCC--CCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred             HHhhcCCCC--CCCCcccHHHHHHHHHHcCCChhhCcCHHHHHH
Confidence            122222212  223568999999999999999999999999873

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.97  E-value=9e-31  Score=250.85  Aligned_cols=200  Identities=21%  Similarity=0.239  Sum_probs=149.0

Q ss_pred             cccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH-----
Q 014171            9 TRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH-----   83 (429)
Q Consensus         9 ~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH-----   83 (429)
                      .+|+|++.+++.+......        ....|+|||||.+|+|.+++.+   ..+++..+..++.|++.||.|||     
T Consensus        93 l~h~ni~~~~~~~~~~~~~--------~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~i~~~i~~~l~~lH~~~~~  161 (342)
T 1b6c_B           93 LRHENILGFIAADNKDNGT--------WTQLWLVSDYHEHGSLFDYLNR---YTVTVEGMIKLALSTASGLAHLHMEIVG  161 (342)
T ss_dssp             CCCTTBCCEEEEEECCCSS--------CCCEEEEECCCTTCBHHHHHHH---CCBCHHHHHHHHHHHHHHHHHHHCCBCS
T ss_pred             cCCCcEEEEEeeecccCCc--------cceeEEEEeecCCCcHHHHHhc---cCccHHHHHHHHHHHHHHHHHHHHHHhh
Confidence            4566666655544331100        0134689999999999999954   36999999999999999999999     


Q ss_pred             ---HCCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc-----ccccccCCcccccccccCCC-------CCCc
Q 014171           84 ---LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-----FQDIVGSAYYVAPEVLKRKS-------GPES  148 (429)
Q Consensus        84 ---~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~-----~~~~~g~~~y~aPE~~~~~~-------~~~~  148 (429)
                         ++||+||||||+||+++   .++.+||+|||++........     .....||+.|+|||++.+..       +.++
T Consensus       162 ~~~~~~ivH~Dlkp~NIll~---~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~  238 (342)
T 1b6c_B          162 TQGKPAIAHRDLKSKNILVK---KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKRA  238 (342)
T ss_dssp             TTCBCEEECSCCSGGGEEEC---TTSCEEECCCTTCEEEETTTTEEEECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHH
T ss_pred             hcccCCeeeCCCCHHHEEEC---CCCCEEEEECCCceeccccccccccccccCCcCcccCCHhhhcccccccccccCCcc
Confidence               89999999999999998   578999999999987654432     24457899999999987642       2579


Q ss_pred             chHHHHHHHHHHhhC----------CCCCCCCCh-----hHHHHHHHhcCCCCCCCC-C--CCCCHHHHHHHHHhccCCc
Q 014171          149 DVWSIGVITYILLCG----------RRPFWDKTE-----DGIFKEVLRNKPDFRRKP-W--PSISNSAKDFVKKLLVKDP  210 (429)
Q Consensus       149 DiwslG~il~~l~~g----------~~pf~~~~~-----~~~~~~i~~~~~~~~~~~-~--~~~~~~~~~li~~~l~~dp  210 (429)
                      ||||+||++|+|++|          ..||.....     ......+.........+. +  ...+..+.+||.+||+.||
T Consensus       239 Di~slG~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp  318 (342)
T 1b6c_B          239 DIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANG  318 (342)
T ss_dssp             HHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSG
T ss_pred             cHHHHHHHHHHHHhccCcCCcccccccCccccCcCcccHHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccCh
Confidence            999999999999999          788866532     223333322222111110 0  1233578999999999999


Q ss_pred             cCcCCHHHHhCC
Q 014171          211 RARLTAAQALSH  222 (429)
Q Consensus       211 ~~R~s~~e~l~h  222 (429)
                      .+|||+.+++++
T Consensus       319 ~~Rps~~~i~~~  330 (342)
T 1b6c_B          319 AARLTALRIKKT  330 (342)
T ss_dssp             GGSCCHHHHHHH
T ss_pred             hhCCCHHHHHHH
Confidence            999999999854

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.97  E-value=1.3e-31  Score=256.37  Aligned_cols=179  Identities=15%  Similarity=0.155  Sum_probs=138.8

Q ss_pred             cccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCCeecCCCCCcEEEeecC-----------
Q 014171           36 PLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH-LHGLVHRDMKPENFLFKSAK-----------  103 (429)
Q Consensus        36 ~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH-~~~i~H~dikp~Nil~~~~~-----------  103 (429)
                      ....|+|||||.+|++.+.+.+   +.+++..++.++.||+.||.||| ++||+||||||+|||++..+           
T Consensus       134 ~~~~~lv~E~~~~g~ll~~~~~---~~~~~~~~~~i~~qi~~aL~~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~  210 (336)
T 2vuw_A          134 DDQLFIVLEFEFGGIDLEQMRT---KLSSLATAKSILHQLTASLAVAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGK  210 (336)
T ss_dssp             TTCEEEEEEEECCCEETGGGTT---TCCCHHHHHHHHHHHHHHHHHHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTE
T ss_pred             cCeEEEEEEecCCCccHHHHHh---cCCCHHHHHHHHHHHHHHHHHHHHhCCEeECCCCHHHEEEeccCCcceeeeccCc
Confidence            3456789999999988877733   57899999999999999999999 99999999999999999532           


Q ss_pred             ------CCCCEEEeecccceeccCCCcccccccCCcccccccccCCCCCCcchHHHHHH-HHHHhhCCCCCCCCCh-hHH
Q 014171          104 ------EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVI-TYILLCGRRPFWDKTE-DGI  175 (429)
Q Consensus       104 ------~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~DiwslG~i-l~~l~~g~~pf~~~~~-~~~  175 (429)
                            ....+||+|||+|+.....    ..+||+.|+|||++.+..+.++||||+|++ .+++++|..||.+... ...
T Consensus       211 ~~~~~~~~~~vkL~DFG~a~~~~~~----~~~gt~~y~aPE~~~g~~~~~~Diwsl~~~~~~~~~~g~~p~~~~~~~~~~  286 (336)
T 2vuw_A          211 SSTIPSCGLQVSIIDYTLSRLERDG----IVVFCDVSMDEDLFTGDGDYQFDIYRLMKKENNNRWGEYHPYSNVLWLHYL  286 (336)
T ss_dssp             EEEEECTTEEEEECCCTTCBEEETT----EEECCCCTTCSGGGCCCSSHHHHHHHHHHHHHTTCTTSCCTHHHHHHHHHH
T ss_pred             cccccCCCceEEEeeccccEecCCC----cEEEeecccChhhhcCCCccceehhhhhCCCCcccccccCCCcchhhhhHH
Confidence                  0128999999999876543    347999999999998777889999998777 7778889999843211 112


Q ss_pred             HHHHHhcCCC---CCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHh-CCCccc
Q 014171          176 FKEVLRNKPD---FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL-SHPWVR  226 (429)
Q Consensus       176 ~~~i~~~~~~---~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l-~h~~~~  226 (429)
                      ...+......   .....++.+++++++||.+||+.|     |++|+| +||||+
T Consensus       287 ~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l~~Hp~f~  336 (336)
T 2vuw_A          287 TDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLLCQHSLFK  336 (336)
T ss_dssp             HHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHHHHCGGGC
T ss_pred             HHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHHhcCCCcC
Confidence            2233322111   111112346788999999999976     999999 999995

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.96  E-value=8e-31  Score=273.78  Aligned_cols=193  Identities=20%  Similarity=0.276  Sum_probs=147.4

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH   85 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~   85 (429)
                      +..++|+|++.+++++......+.       ...|+|||||+||+|.+++.    ..+++.++..++.||+.||.|||++
T Consensus       133 l~~l~hp~iv~~~~~~~~~~~~~~-------~~~~lv~E~~~g~~L~~~~~----~~l~~~~~~~~~~qi~~aL~~lH~~  201 (681)
T 2pzi_A          133 LAEVVHPSIVQIFNFVEHTDRHGD-------PVGYIVMEYVGGQSLKRSKG----QKLPVAEAIAYLLEILPALSYLHSI  201 (681)
T ss_dssp             GGGCCCTTBCCEEEEEEEECTTSC-------EEEEEEEECCCCEECC--------CCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHhcCCCCcCeEeeeEeecCCCCC-------ceeEEEEEeCCCCcHHHHHh----CCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            345566666666665543221110       11378999999999998763    2799999999999999999999999


Q ss_pred             CCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccCCCCCCcchHHHHHHHHHHhhCCC
Q 014171           86 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRR  165 (429)
Q Consensus        86 ~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~DiwslG~il~~l~~g~~  165 (429)
                      ||+||||||+||+++.    +.+||+|||++......   ....||+.|+|||++.+.++.++||||+||++|+|++|.+
T Consensus       202 giiHrDlkp~NIll~~----~~~kl~DFG~a~~~~~~---~~~~gt~~y~aPE~~~~~~~~~sDi~slG~~l~~l~~g~~  274 (681)
T 2pzi_A          202 GLVYNDLKPENIMLTE----EQLKLIDLGAVSRINSF---GYLYGTPGFQAPEIVRTGPTVATDIYTVGRTLAALTLDLP  274 (681)
T ss_dssp             TEECCCCSGGGEEECS----SCEEECCCTTCEETTCC---SCCCCCTTTSCTTHHHHCSCHHHHHHHHHHHHHHHHSCCC
T ss_pred             CCeecccChHHeEEeC----CcEEEEecccchhcccC---CccCCCccccCHHHHcCCCCCceehhhhHHHHHHHHhCCC
Confidence            9999999999999983    48999999999876543   4567999999999998777889999999999999999999


Q ss_pred             CCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccc
Q 014171          166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR  226 (429)
Q Consensus       166 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~  226 (429)
                      ||.+.....        .+  ........++.+.++|.+||+.||.+||++.+.+.|+|+.
T Consensus       275 ~~~~~~~~~--------~~--~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~  325 (681)
T 2pzi_A          275 TRNGRYVDG--------LP--EDDPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG  325 (681)
T ss_dssp             EETTEECSS--------CC--TTCHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred             CCccccccc--------cc--ccccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence            886532110        00  0001112467899999999999999999988888888764

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.95  E-value=2.3e-28  Score=228.40  Aligned_cols=151  Identities=17%  Similarity=0.144  Sum_probs=118.4

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||+||+|.+++.+    .....++..++.||+.||.|||++||+||||||+||+++   .++.+||+++|   
T Consensus       105 ~~~lv~e~~~g~~L~~~l~~----~~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~---~~g~~kl~~~~---  174 (286)
T 3uqc_A          105 GGLVVAEWIRGGSLQEVADT----SPSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVS---IDGDVVLAYPA---  174 (286)
T ss_dssp             EEEEEEECCCEEEHHHHHTT----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEE---TTSCEEECSCC---
T ss_pred             cEEEEEEecCCCCHHHHHhc----CCChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEc---CCCCEEEEecc---
Confidence            45789999999999998822    246667889999999999999999999999999999999   57889987443   


Q ss_pred             eccCCCcccccccCCcccccccccCCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHH---HHHhcCCCCCCCCCCCC
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFK---EVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~---~i~~~~~~~~~~~~~~~  194 (429)
                                      |++|      ++.++||||+||++|+|++|+.||.+.+......   .........+....+.+
T Consensus       175 ----------------~~~~------~~~~~Di~slG~il~elltg~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  232 (286)
T 3uqc_A          175 ----------------TMPD------ANPQDDIRGIGASLYALLVNRWPLPEAGVRSGLAPAERDTAGQPIEPADIDRDI  232 (286)
T ss_dssp             ----------------CCTT------CCHHHHHHHHHHHHHHHHHSEECSCCCSBCCCSEECCBCTTSCBCCHHHHCTTS
T ss_pred             ----------------ccCC------CCchhHHHHHHHHHHHHHHCCCCCCcCCcchhhHHHHHHhccCCCChhhcccCC
Confidence                            3332      5789999999999999999999998766543211   11111111111223568


Q ss_pred             CHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ++.+.++|.+||+.||.+| |+.++++
T Consensus       233 ~~~l~~li~~~l~~dP~~R-s~~el~~  258 (286)
T 3uqc_A          233 PFQISAVAARSVQGDGGIR-SASTLLN  258 (286)
T ss_dssp             CHHHHHHHHHHHCTTSSCC-CHHHHHH
T ss_pred             CHHHHHHHHHHcccCCccC-CHHHHHH
Confidence            9999999999999999999 9999875

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}

Probab=99.94  E-value=2.7e-27  Score=208.67  Aligned_cols=181  Identities=31%  Similarity=0.492  Sum_probs=141.9

Q ss_pred             CCCccccCCCCCCCCcChHHHHhhHHhhhhhHHHHHHHHhhhcccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhh
Q 014171          221 SHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKD  300 (429)
Q Consensus       221 ~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~  300 (429)
                      .|||.+... ....+.+...+.++++|...+++++.++..+...++++++..++++|..+|.|++|+|+.+||..++.. 
T Consensus         8 ~~~~~~~~~-~~~~~l~~~~~~~l~~f~~~~~lk~~~l~~i~~~l~~~e~~~l~~~F~~~D~d~~G~Is~~El~~~l~~-   85 (197)
T 3pm8_A            8 SSGRENLYF-QGHVELSSTLLKNLKNFKKENELKKIALTIIAKHLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKK-   85 (197)
T ss_dssp             ----------CCSCCCCTTHHHHHHHTTTSCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH-
T ss_pred             cchHhhhcc-CCCCCCCHHHHHHHHHHHHccHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH-
Confidence            489988764 456667778899999999999999999999999999999999999999999999999999999999965 


Q ss_pred             CCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCC-
Q 014171          301 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK-  379 (429)
Q Consensus       301 ~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~-  379 (429)
                      +|..++..++..+|+.+|.|++|.|+|+||+.++........      .+.+..+|+.+|+|++|+|+.+||+.++... 
T Consensus        86 ~g~~~~~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~~~~------~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~  159 (197)
T 3pm8_A           86 IGYQKIPPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLK------KEVCLIPFKFFDIDGNGKISVEELKRIFGRDD  159 (197)
T ss_dssp             HC----CHHHHHHHHC-------CEEHHHHHHTTCCHHHHCS------HHHHHHHHHHHCTTCSSEECHHHHHHHHC---
T ss_pred             hCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHhhhh------HHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcc
Confidence            688889999999999999999999999999987654433322      3468899999999999999999999999987 


Q ss_pred             -CC------HHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          380 -GS------IDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       380 -~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                       +.      ++.++..+|.|+||.|+|+||+.+|++.
T Consensus       160 ~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~  196 (197)
T 3pm8_A          160 IENPLIDKAIDSLLQEVDLNGDGEIDFHEFMLMMSKK  196 (197)
T ss_dssp             -CCHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHCC
T ss_pred             cCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHcC
Confidence             42      8889999999999999999999999863

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A

Probab=99.93  E-value=1.9e-26  Score=202.27  Aligned_cols=177  Identities=28%  Similarity=0.435  Sum_probs=147.3

Q ss_pred             CCCccccCCCCCCCCcChHHHHhhHHhhhhhHHHHHHHHhhhcccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhh
Q 014171          221 SHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKD  300 (429)
Q Consensus       221 ~h~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~  300 (429)
                      .|||+-... ....+.+...+.+|++|...+++++.++..+...++++++.+++++|..+|.|++|+|+.+||..++.. 
T Consensus         3 ~~~~~~~~~-~~~~~l~~~~~~~l~~~~~~~~l~~~~l~~~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~-   80 (191)
T 3k21_A            3 HHHHHSSGR-ENLYFQGIHVLENFKNYGLLLKFQKLAMTIIAQQSNDYDVEKLKSTFLVLDEDGKGYITKEQLKKGLEK-   80 (191)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH-
T ss_pred             CCccccCCc-cccccccHHHHHHHHHHHhhHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH-
Confidence            466665543 334455678899999999999999999999999999999999999999999999999999999999954 


Q ss_pred             CCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC
Q 014171          301 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG  380 (429)
Q Consensus       301 ~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~  380 (429)
                      +|..++ .++..++..+|.|++|.|+|+||+..+.....    ..   ...+..+|+.+|+|++|+|+.+||+.++...+
T Consensus        81 ~g~~~~-~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~~~----~~---~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~  152 (191)
T 3k21_A           81 DGLKLP-YNFDLLLDQIDSDGSGKIDYTEFIAAALDRKQ----LS---KKLIYCAFRVFDVDNDGEITTAELAHILYNGN  152 (191)
T ss_dssp             TTCCCC-TTHHHHHHHHCTTCSSSEEHHHHHHHHSCGGG----CC---HHHHHHHHHHHSTTCSSCBCHHHHHHHHHHSS
T ss_pred             cCCCcH-HHHHHHHHHhCCCCCCeEeHHHHHHHHHhhhh----cc---HHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcC
Confidence            888888 89999999999999999999999987644332    11   24678899999999999999999999986532


Q ss_pred             -----------CHHHHHHHhCCCCCCcccHHHHHHHHH
Q 014171          381 -----------SIDPLLEEADIDKDGRISLSEFRRLLR  407 (429)
Q Consensus       381 -----------~~~~~~~~~d~~~dg~i~~~ef~~~~~  407 (429)
                                 ++..++..+|.|+||.|+|+||+.+|+
T Consensus       153 ~~~~l~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~  190 (191)
T 3k21_A          153 KKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFSEMMK  190 (191)
T ss_dssp             SCSCCCHHHHHHHHHHHHHHCSSSSSSBCHHHHHHHHC
T ss_pred             CCCCCCHhHHHHHHHHHHHhcCCCCCeECHHHHHHHHc
Confidence                       278899999999999999999999985

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.93  E-value=1.4e-27  Score=243.03  Aligned_cols=123  Identities=17%  Similarity=0.144  Sum_probs=88.6

Q ss_pred             cccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           36 PLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        36 ~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      ....|||||||+||+|.++|.+.  +.+++.   .|+.||+.||+|||++|||||||||+|||++   .++.+||+|||+
T Consensus       314 ~~~~yLVMEyv~G~~L~d~i~~~--~~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~---~dg~vKL~DFGl  385 (569)
T 4azs_A          314 AQSGWLVMEKLPGRLLSDMLAAG--EEIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVD---ARQHARLIDFGS  385 (569)
T ss_dssp             SSEEEEEEECCCSEEHHHHHHTT--CCCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEEC---TTSCEEECCCTT
T ss_pred             CCEEEEEEecCCCCcHHHHHHhC--CCCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEEC---CCCCEEEeeccc
Confidence            34568999999999999999544  678765   4789999999999999999999999999998   578999999999


Q ss_pred             ceeccCC-CcccccccCCcccccccccCCCCCCcchHHHHHHHHHHhhCCCC
Q 014171          116 SDFIKPG-KKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCGRRP  166 (429)
Q Consensus       116 a~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~DiwslG~il~~l~~g~~p  166 (429)
                      |+..... ....+.+||+.|+|||++.+.+..++|+||+|++++.+.++..|
T Consensus       386 Ar~~~~~~~~~~t~vGTp~YmAPE~l~g~~~~~~d~~s~g~~~~~l~~~~~~  437 (569)
T 4azs_A          386 IVTTPQDCSWPTNLVQSFFVFVNELFAENKSWNGFWRSAPVHPFNLPQPWSN  437 (569)
T ss_dssp             EESCC---CCSHHHHHHHHHHHHHHC-----------------CCCCTTHHH
T ss_pred             CeeCCCCCccccCceechhhccHHHhCCCCCCcccccccccchhhhccccch
Confidence            9876543 33456789999999999998888899999999998887766444

>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}

Probab=99.91  E-value=4.6e-25  Score=190.55  Aligned_cols=140  Identities=30%  Similarity=0.498  Sum_probs=124.7

Q ss_pred             cccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcc
Q 014171          263 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE  342 (429)
Q Consensus       263 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~  342 (429)
                      ..++++++++++++|..+|.|++|+|+.+||..+|. .+|..+++.++..++..+|.+++|.|+|.||+..+....... 
T Consensus         3 ~~Lt~eqi~elk~~F~~~D~d~dG~I~~~El~~~l~-~lg~~~~~~~~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~-   80 (176)
T 2lhi_A            3 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMR-SLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSN-   80 (176)
T ss_dssp             CCCCTTGGGHHHHHHHTTCSSCSSCBCHHHHHHHHH-HHTCCCCHHHHHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSS-
T ss_pred             CcCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH-HcCCChhHHHHHHHHHHhCcCCCccchHHHHHHHHHHhcccC-
Confidence            567899999999999999999999999999999994 589999999999999999999999999999998765332221 


Q ss_pred             cccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       343 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                          ...+.++.+|+.||+|++|+|+.+||+.++...+.      +++++.++| |+||.|+|+||+.+|++.
T Consensus        81 ----~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~d-d~dG~I~~~EF~~~m~k~  148 (176)
T 2lhi_A           81 ----DSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALLSKG  148 (176)
T ss_dssp             ----HHHHHHHHHHHHHCSSCSSSBCHHHHHHHHHTTTCCCCHHHHHHHHHHHH-TTSSCBCTTHHHHHHTCC
T ss_pred             ----CcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCcccchHHHHHHHHhhc-CCCCeEeHHHHHHHHHhc
Confidence                12356899999999999999999999999998874      899999999 999999999999999764

>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A

Probab=99.91  E-value=8.4e-25  Score=183.50  Aligned_cols=139  Identities=29%  Similarity=0.522  Sum_probs=124.0

Q ss_pred             ccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhccc
Q 014171          264 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH  343 (429)
Q Consensus       264 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~  343 (429)
                      .++++++++++++|..+|.|++|+|+.+||..++. .+|..++..++..++..+|.+++|.|+|.||+..+........ 
T Consensus         3 ~lt~eqi~el~~~F~~~D~d~~G~I~~~El~~~l~-~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~-   80 (148)
T 2lmt_A            3 ELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMR-TLGQNPTEAELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETD-   80 (148)
T ss_dssp             SCCSHHHHHHHHHHHHHHCSSCCEEEGGGHHHHHH-HHTCCCCHHHHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTT-
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHH-hcCCCchHHHHHHHHHhcccCCCCcccHHHHHHHHHHHhcccC-
Confidence            47899999999999999999999999999999994 5899999999999999999999999999999987754432221 


Q ss_pred             ccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          344 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       344 ~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                       .   ...++.+|+.||+|++|+|+.+||+.++...|.      ++.++..+|.|+||.|+|+||+++|.+
T Consensus        81 -~---~~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~m~~  147 (148)
T 2lmt_A           81 -T---EEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEFVWMISQ  147 (148)
T ss_dssp             -T---HHHHHHHHHHHHSSCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSCCSSEEHHHHHHHHTT
T ss_pred             -c---HHHHHHHHHHHCCCCcCcCcHHHHHHHHHHcCccccHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence             1   246889999999999999999999999987774      899999999999999999999999975

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A

Probab=99.90  E-value=5e-24  Score=177.63  Aligned_cols=135  Identities=27%  Similarity=0.493  Sum_probs=119.1

Q ss_pred             hHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccH
Q 014171          267 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE  346 (429)
Q Consensus       267 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~  346 (429)
                      ++++.+++++|..+|.|++|+|+.+||..+| +.+|..++..++..++..+|.+++|.|+|+||+.++......     .
T Consensus         2 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l-~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~-----~   75 (143)
T 2obh_A            2 EEQKQEIREAFDLFDADGTGTIDVKELKVAM-RALGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSE-----K   75 (143)
T ss_dssp             HHHHHHHHHHHHTTCTTCCSEEEGGGHHHHH-HHTTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHH-----H
T ss_pred             HHHHHHHHHHHHHhCCCCCCcCcHHHHHHHH-HHcCCCCCHHHHHHHHHHhCCCCCCeeeHHHHHHHHHHHhcc-----c
Confidence            5678889999999999999999999999999 458999999999999999999999999999999876543211     1


Q ss_pred             HHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHH
Q 014171          347 KWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLR  407 (429)
Q Consensus       347 ~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~  407 (429)
                      .....++.+|+.||+|++|+|+.+||+.++...|.      +..++..+|.|+||.|+|+||+.+|+
T Consensus        76 ~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~I~~~eF~~~~~  142 (143)
T 2obh_A           76 DTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIMK  142 (143)
T ss_dssp             HHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHC
T ss_pred             cHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence            12346889999999999999999999999987763      88999999999999999999999885

>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}

Probab=99.90  E-value=5.8e-24  Score=201.40  Aligned_cols=140  Identities=29%  Similarity=0.557  Sum_probs=122.9

Q ss_pred             cccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcc
Q 014171          263 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE  342 (429)
Q Consensus       263 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~  342 (429)
                      ..++++|+++++++|+.+|.|++|+|+.+||..+|. .+|..+++.+++++++.+|.|++|.|+|+||+.++........
T Consensus       294 E~Lt~EEI~ELREaF~~fDkDgdG~IS~eELk~aLr-sLG~~~TeeEI~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~~d  372 (440)
T 3u0k_A          294 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMR-SLGQNPTEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDTD  372 (440)
T ss_dssp             BCCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHH-HTTCCCCHHHHHHHHHHHCSSCSSSEEHHHHHHHHHTC-----
T ss_pred             hhhhHHHHHHHHHHHHHHcCCCCCEECHHHHHHHHH-HcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCC
Confidence            467899999999999999999999999999999994 5999999999999999999999999999999987754322211


Q ss_pred             cccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       343 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                        .   .+.++++|+.||+|++|+|+.+||++++...|.      ++++|+++|.|+||.|+|+||+++|.+
T Consensus       373 --~---eeeLreAFk~fDkDgdG~IS~eELr~vL~~lGe~LSdeEIdeLfke~D~DgDGkIsyeEFvkmMtS  439 (440)
T 3u0k_A          373 --S---EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA  439 (440)
T ss_dssp             ------CHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHC-
T ss_pred             --h---HHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHhCC
Confidence              1   246889999999999999999999999987763      899999999999999999999999864

>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C

Probab=99.90  E-value=2.7e-24  Score=182.47  Aligned_cols=141  Identities=19%  Similarity=0.322  Sum_probs=120.9

Q ss_pred             ccchHHHhhhhccccccCC--CCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhc
Q 014171          264 TLDDEELADLRDQFDAIDV--DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE  341 (429)
Q Consensus       264 ~~~~~~~~~l~~~F~~~D~--~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~  341 (429)
                      +++++++++++++|..+|.  |++|+|+..||..+| +.+|..+++.++..++. .|.+++|.|+|+||+.++.......
T Consensus         2 qLt~eqi~elre~F~~fD~~~d~dG~I~~~El~~~l-r~lG~~~t~~el~~~~~-~d~~~~g~i~f~eFl~~~~~~~~~~   79 (159)
T 3i5g_C            2 QLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLL-RCLGMNPTEAQVHQHGG-TKKMGEKAYKLEEILPIYEEMSSKD   79 (159)
T ss_dssp             CCCHHHHHHHHHHHHHHHHHTTSSSCEEGGGHHHHH-HHTTCCCCHHHHHTTTC-CSSTTSCEECHHHHHHHHHHHTTCC
T ss_pred             CCCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHH-HHcCCCCCHHHHHHHHc-ccccCCCcccHHHHHHHHHHhhccc
Confidence            5789999999999999995  899999999999999 56999999999998764 4778899999999998776543322


Q ss_pred             ccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCC--CCCCcccHHHHHHHHHhc
Q 014171          342 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADI--DKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       342 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~--~~dg~i~~~ef~~~~~~~  409 (429)
                      ....   .+.++.||+.||+|++|+|+.+||++++..+|.      ++.+++.+|.  |+||.|+|+||+++|...
T Consensus        80 ~~~~---~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~D~~~d~dG~I~~~EF~~~m~~~  152 (159)
T 3i5g_C           80 TGTA---ADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVMAG  152 (159)
T ss_dssp             TTCC---HHHHHHHHHHHCTTSSSEECHHHHHHHHHHSSSCCCHHHHHHHHHHTTCCCCSSCCEEHHHHHHHHHHC
T ss_pred             ccch---HHHHHHHHHHHhcCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCcCCCCCCeEeHHHHHHHHHCC
Confidence            2222   246889999999999999999999999998884      8999999995  899999999999998753

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}

Probab=99.90  E-value=3.9e-23  Score=179.24  Aligned_cols=163  Identities=29%  Similarity=0.461  Sum_probs=140.7

Q ss_pred             ChHHHHhhHHhhhhhHHHHHHHHhhhcccc--hHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHH
Q 014171          237 DISVLNNMRQFVKYSRLKQFALRALASTLD--DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEIL  314 (429)
Q Consensus       237 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~  314 (429)
                      +...+.+|++|...+++++.++..+...++  ++++.+++++|..+|.|++|+|+.+||..++.. +|..  ..++..+|
T Consensus         3 ~~~~~~~l~~~~~~~~l~~~~l~~~~~~l~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~-~g~~--~~~~~~~~   79 (180)
T 3mse_B            3 SPNVLNNMKSYMKHSNIRNIIINIMAHELSVINNHIKYINELFYKLDTNHNGSLSHREIYTVLAS-VGIK--KWDINRIL   79 (180)
T ss_dssp             CHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH-TTCC--HHHHHHHH
T ss_pred             CHHHHHHHHHHHHHhHHHHHHHHHHHHHccCCHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH-cCCC--HHHHHHHH
Confidence            356788999999999999999999998887  889999999999999999999999999999954 7754  58899999


Q ss_pred             HHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC----CHHHHHHHhC
Q 014171          315 QAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEAD  390 (429)
Q Consensus       315 ~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~----~~~~~~~~~d  390 (429)
                      ..+|.|++|.|+|+||+..+.......       ...+..+|+.+|+|++|+|+.+||+.++...+    +++.++..+|
T Consensus        80 ~~~D~d~~g~i~~~Ef~~~~~~~~~~~-------~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~d  152 (180)
T 3mse_B           80 QALDINDRGNITYTEFMAGCYRWKNIE-------STFLKAAFNKIDKDEDGYISKSDIVSLVHDKVLDNNDIDNFFLSVH  152 (180)
T ss_dssp             HHHCTTCCSEECHHHHHHHHSCCTTC---------CHHHHHHHHHCTTCSSCBCHHHHHHHTTTSSCCHHHHHHHHHHHH
T ss_pred             HHhCCCCCCcCcHHHHHHHHHhcccCC-------HHHHHHHHHHHCCCCCCCCCHHHHHHHHcCCCCCHHHHHHHHHHhh
Confidence            999999999999999998775433221       13578899999999999999999999998443    3899999999


Q ss_pred             CCCC--------CcccHHHHHHHHHhc
Q 014171          391 IDKD--------GRISLSEFRRLLRTA  409 (429)
Q Consensus       391 ~~~d--------g~i~~~ef~~~~~~~  409 (429)
                      .|+|        |.|+|+||+.+|.+.
T Consensus       153 ~~~d~~~~~~~~G~i~~~eF~~~l~~~  179 (180)
T 3mse_B          153 SIKKGIPREHIINKISFQEFKDYMLST  179 (180)
T ss_dssp             TC---------CCCBCHHHHHHHHHTT
T ss_pred             hccCcccccccCCeeeHHHHHHHHHhc
Confidence            9988        999999999999864

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}

Probab=99.89  E-value=1.5e-23  Score=183.32  Aligned_cols=168  Identities=30%  Similarity=0.456  Sum_probs=145.5

Q ss_pred             ChHHHHhhHHhhhhhHHHHHHHHhhhccc-chHHHhhhhccccccCCCCCCcccHHHHHHHHHhh----------CCCCc
Q 014171          237 DISVLNNMRQFVKYSRLKQFALRALASTL-DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKD----------LPWKL  305 (429)
Q Consensus       237 ~~~~l~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~----------~~~~~  305 (429)
                      +...+.+|++|...+.+++.++..+...+ +++++.+++++|..+|.|++|.|+.+||..++...          .+..+
T Consensus         5 ~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~   84 (191)
T 3khe_A            5 LTGALGNMKKFQSSQKLAQAAMLFMGSKLTTLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQ   84 (191)
T ss_dssp             HHHHHHHHHHCCCCCHHHHHHHHHHHHHSSCTTTTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccchh
Confidence            45678899999999999999999999888 88999999999999999999999999999999652          15667


Q ss_pred             cHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC----C
Q 014171          306 KESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----S  381 (429)
Q Consensus       306 ~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~----~  381 (429)
                      +..++..+|..+|.|++|.|+|+||+..+........      ...+..+|+.+|.|++|+|+.+||+.++....    +
T Consensus        85 ~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~~~~~~~------~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~  158 (191)
T 3khe_A           85 IEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLS------RERLLAAFQQFDSDGSGKITNEELGRLFGVTEVDDET  158 (191)
T ss_dssp             HHHHHHHHHHHTCTTCSSSEEHHHHHHHHSCHHHHCC------HHHHHHHHHHHCTTCSSEECHHHHHHHTTSSCCCHHH
T ss_pred             hHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhcccch------HHHHHHHHHHHCCCCcCcCCHHHHHHHHccCCCCHHH
Confidence            7889999999999999999999999987654432222      24678899999999999999999999998222    2


Q ss_pred             HHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          382 IDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       382 ~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      +..++..+|.|+||.|+|+||+.+|.+..
T Consensus       159 ~~~~~~~~D~~~dg~i~~~eF~~~~~~~~  187 (191)
T 3khe_A          159 WHQVLQECDKNNDGEVDFEEFVEMMQKIC  187 (191)
T ss_dssp             HHHHHHHHCTTCSSSEEHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHHHh
Confidence            88999999999999999999999998653

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}

Probab=99.89  E-value=3.9e-23  Score=176.42  Aligned_cols=158  Identities=41%  Similarity=0.709  Sum_probs=133.0

Q ss_pred             HhhhhhHHHHHHHHhhhcccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcc
Q 014171          246 QFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV  325 (429)
Q Consensus       246 ~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I  325 (429)
                      .|...+.+++.++..+...++++++.+++++|..+|.|++|+|+.+||..++. .+|..++..++..++..+|.+++|.|
T Consensus         2 ~f~~~~~~~~~~~~~~~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~-~~~~~~~~~~~~~~~~~~d~~~~g~i   80 (166)
T 2aao_A            2 QFSAMNKFKKMALRVIAESLSEEEIAGLKEMFNMIDADKSGQITFEELKAGLK-RVGANLKESEILDLMQAADVDNSGTI   80 (166)
T ss_dssp             ----CHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHHGG-GGTCCCCHHHHHHHHHHHCTTCCSSB
T ss_pred             chhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHH-HhCCCCCHHHHHHHHHHhCCCCCCeE
Confidence            56677889999999999999999999999999999999999999999999995 48999999999999999999999999


Q ss_pred             cHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC----CHHHHHHHhCCCCCCcccHHH
Q 014171          326 DFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSE  401 (429)
Q Consensus       326 ~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~----~~~~~~~~~d~~~dg~i~~~e  401 (429)
                      +|+||+..+........      ...+..+|+.+|.|++|+|+.+||+.++...|    ++..++..+|.|++|.|+|+|
T Consensus        81 ~~~ef~~~~~~~~~~~~------~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~d~~~dg~i~~~e  154 (166)
T 2aao_A           81 DYKEFIAATLHLNKIER------EDHLFAAFTYFDKDGSGYITPDELQQACEEFGVEDVRIEELMRDVDQDNDGRIDYNE  154 (166)
T ss_dssp             CHHHHHHHHTTCHHHHT------THHHHHHHHHHCTTCSSSBCHHHHHHHTCC--------CCHHHHHCTTCSSSBCHHH
T ss_pred             cHHHHHHHHHHHhhccc------HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCCcEeHHH
Confidence            99999987754432221      23578899999999999999999999998776    377899999999999999999


Q ss_pred             HHHHHHhcc
Q 014171          402 FRRLLRTAS  410 (429)
Q Consensus       402 f~~~~~~~~  410 (429)
                      |+.++.+..
T Consensus       155 F~~~~~~~~  163 (166)
T 2aao_A          155 FVAMMQKGS  163 (166)
T ss_dssp             HHHHHC---
T ss_pred             HHHHHHhcc
Confidence            999998754

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...

Probab=99.89  E-value=5.3e-23  Score=172.32  Aligned_cols=139  Identities=29%  Similarity=0.534  Sum_probs=122.2

Q ss_pred             ccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhccc
Q 014171          264 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH  343 (429)
Q Consensus       264 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~  343 (429)
                      .++++++.+++++|..+|.|++|+|+.+||..++.. +|..++..++..++..+|.|++|.|+|+||+..+.......  
T Consensus         3 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~--   79 (148)
T 1exr_A            3 QLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRS-LGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQ--   79 (148)
T ss_dssp             CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH-HTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHH--
T ss_pred             cCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-cCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCC--
Confidence            467888899999999999999999999999999954 89999999999999999999999999999998775432211  


Q ss_pred             ccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          344 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       344 ~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                         .....+..+|+.+|+|++|+|+.+||+.++...|.      ++.++..+|.|+||.|+|+||+.+|.+
T Consensus        80 ---~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~~  147 (148)
T 1exr_A           80 ---DSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMVS  147 (148)
T ss_dssp             ---HHHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHHC
T ss_pred             ---CcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHcc
Confidence               11346888999999999999999999999987763      899999999999999999999999864

>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B

Probab=99.88  E-value=3.9e-23  Score=174.13  Aligned_cols=136  Identities=21%  Similarity=0.374  Sum_probs=117.9

Q ss_pred             ccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhccc
Q 014171          264 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH  343 (429)
Q Consensus       264 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~  343 (429)
                      .++++++++++++|..+|.|++|+|+.+||..+| +.+|..+++.++..++.    +.+|.|+|++|+..+.......  
T Consensus         9 ~Lt~~qi~elk~~F~~~D~d~dG~I~~~El~~~l-~~lg~~~~~~~~~~~~~----~~~~~i~f~ef~~~~~~~~~~~--   81 (153)
T 3i5g_B            9 KLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMF-SSLGRVPPDDELNAMLK----ECPGQLNFTAFLTLFGEKVSGT--   81 (153)
T ss_dssp             TCCHHHHHHHHHHHHHHCCSTTSCCCHHHHHHHH-HHTTSCCCHHHHHHHHH----TSSSCCCSHHHHHTTTTTTTTC--
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHH-HHcCCCccHHHHHHHHH----hccCCccHHHHHHHHHhhhccc--
Confidence            5789999999999999999999999999999999 55999999999887775    4577899999998765433222  


Q ss_pred             ccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          344 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       344 ~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      ..   .+.++.+|+.||+|++|+|+.+||+.++..+|+      ++.++..+|.| ||.|+|+||+++|.+..
T Consensus        82 ~~---~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~ls~~ei~~~~~~~D~~-dG~I~y~EF~~~m~~~~  150 (153)
T 3i5g_B           82 DP---EDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEEIKNVWKDAPLK-NKQFNYNKMVDIKGKAE  150 (153)
T ss_dssp             CC---HHHHHHHHHTTCSSCSSCCCHHHHHHHHHSSSSCCCHHHHHHHHTTCCEE-TTEECHHHHHHHHHCSC
T ss_pred             cc---HHHHHHHHhccccCCCCeEeHHHHHHHHHHcCCcCCHHHHHHHHHHhCCC-cCEEcHHHHHHHhcCCC
Confidence            22   246899999999999999999999999999884      89999999988 99999999999998753

>1qv0_A Obelin, OBL; photoprotein, bioluminescence, atomic resolution, Ca binding, EF-hand, luminescent protein; HET: CZH; 1.10A {Obelia longissima} SCOP: a.39.1.5 PDB: 1qv1_A* 1sl9_A* 1el4_A* 2f8p_A* 1sl7_A 1jf2_A* 1s36_A* 1jf0_A* 3kpx_A*

Probab=99.88  E-value=1.1e-22  Score=178.48  Aligned_cols=161  Identities=18%  Similarity=0.262  Sum_probs=128.4

Q ss_pred             hcccchHHHhhhhccccccCCCCCCcccHHHHH-----HHHHhhCCCCccHH-----HHHHHHHHhcCCCCCcccHHHHH
Q 014171          262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMR-----QALAKDLPWKLKES-----RVLEILQAIDCNTDGLVDFSEFV  331 (429)
Q Consensus       262 ~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~-----~~l~~~~~~~~~~~-----~~~~l~~~~d~~~~g~I~~~eF~  331 (429)
                      ...++++++++++++|..+|.|++|+|+.+||.     .++ +.+|..++..     ++..++..+|.|++|.|+|+||+
T Consensus        11 ~~~~s~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l-~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~   89 (195)
T 1qv0_A           11 TDFDNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDIC-AKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFL   89 (195)
T ss_dssp             CCTTCHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHH-HHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHH
T ss_pred             cccCCHHHHHHHHHHHhHcCCCCCCcCcHHHHHHHHHHHHH-HHcCCCccHHHHHHHHHHHHHHHcCCCCCceEcHHHHH
Confidence            344588999999999999999999999999999     567 4589888876     68999999999999999999999


Q ss_pred             HHHhhhhhhc-----ccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHH
Q 014171          332 AATLHVHQLE-----EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLS  400 (429)
Q Consensus       332 ~~~~~~~~~~-----~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~  400 (429)
                      ..+.......     ..........+..+|+.+|+|++|+|+.+||+.++...|.      ++.++..+|.|+||.|+|+
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~  169 (195)
T 1qv0_A           90 DGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVD  169 (195)
T ss_dssp             HHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHH
T ss_pred             HHHHHHHhhhhhcccccHHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCCHH
Confidence            8776543211     1111111223348999999999999999999999987663      8899999999999999999


Q ss_pred             HHHHHHHhccccCCCCCCCCCCC
Q 014171          401 EFRRLLRTASISSRNVPPSPSGH  423 (429)
Q Consensus       401 ef~~~~~~~~~~~~~~~~~~~~~  423 (429)
                      ||+.++.....+.++..|+.=|.
T Consensus       170 eF~~~~~~~~~s~d~~~~g~~g~  192 (195)
T 1qv0_A          170 EMTRQHLGFWYTLDPEADGLYGN  192 (195)
T ss_dssp             HHHHHHHHHHTTCCGGGTTTTTT
T ss_pred             HHHHHHHHHccCCCccCccccCC
Confidence            99999999998888888874443

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}

Probab=99.87  E-value=7.3e-22  Score=172.70  Aligned_cols=156  Identities=18%  Similarity=0.187  Sum_probs=132.0

Q ss_pred             cccchHHHhhhhcccccc-CCCCCCcccHHHHHHHHHhhC----CCCccHHHHHHHH-----------HHhcCCCCCccc
Q 014171          263 STLDDEELADLRDQFDAI-DVDKNGSISLEEMRQALAKDL----PWKLKESRVLEIL-----------QAIDCNTDGLVD  326 (429)
Q Consensus       263 ~~~~~~~~~~l~~~F~~~-D~~~~G~i~~~el~~~l~~~~----~~~~~~~~~~~l~-----------~~~d~~~~g~I~  326 (429)
                      ..+++.+.++++++|..+ |.|++|+|+.+||..++.. +    |..++..++..++           ..+|.|++|.|+
T Consensus         4 ~~ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~-~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~D~d~dG~i~   82 (191)
T 2ccm_A            4 HQLSDFQRNKILRVFNTFYDCNHDGVIEWDDFELAIKK-ICNLHSWPTDGKKHNEARATLKLIWDGLRKYADENEDEQVT   82 (191)
T ss_dssp             CCCCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHH-HHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTCSSCEE
T ss_pred             hhccHHHHHHHHHhccccccCCCCCeeeHHHHHHHHHH-HHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCCCCeEC
Confidence            456788889999999999 9999999999999999965 5    8888888898888           999999999999


Q ss_pred             HHHHHHHHhhhhhh---cccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC----CHHHHHHHhCCCCCCcccH
Q 014171          327 FSEFVAATLHVHQL---EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISL  399 (429)
Q Consensus       327 ~~eF~~~~~~~~~~---~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~----~~~~~~~~~d~~~dg~i~~  399 (429)
                      |+||+..+......   ...........+..+|+.+|+|++|+|+.+||+.++...|    ++..+|..+|.|+||.|+|
T Consensus        83 ~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~~~~~~~~~~~D~d~dG~i~~  162 (191)
T 2ccm_A           83 KEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYGIPKSDCDAAFDTLSDGGKTMVTR  162 (191)
T ss_dssp             HHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTTTCCHHHHHHHHHHHTTTTTSCCBH
T ss_pred             HHHHHHHHHHHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCHHHHHHHHHHhCCCCCCCcCH
Confidence            99999877653211   1111122245688999999999999999999999998776    3889999999999999999


Q ss_pred             HHHHHHHHhccccCCCCCCC
Q 014171          400 SEFRRLLRTASISSRNVPPS  419 (429)
Q Consensus       400 ~ef~~~~~~~~~~~~~~~~~  419 (429)
                      +||+.+++....+.++..|+
T Consensus       163 ~Ef~~~~~~~~~s~d~~~~~  182 (191)
T 2ccm_A          163 EIFARLWTEYFVSNDRGAKG  182 (191)
T ss_dssp             HHHHHHHHHHHHCCCTTCGG
T ss_pred             HHHHHHHHHHhcCCCCCCCc
Confidence            99999999998888777665

>1uhk_A Aequorin 2, aequorin; EF-hand motif, complex, luminescent protein; HET: CZN; 1.60A {Aequorea victoria} SCOP: a.39.1.5 PDB: 1ej3_A* 1uhi_A* 1uhj_A* 1uhh_A* 1sl8_A

Probab=99.87  E-value=5.5e-22  Score=173.25  Aligned_cols=157  Identities=20%  Similarity=0.268  Sum_probs=129.7

Q ss_pred             cchHHHhhhhccccccCCCCCCcccHHHHH-----HHHHhhCCCCccHH-----HHHHHHHHhcCCCCCcccHHHHHHHH
Q 014171          265 LDDEELADLRDQFDAIDVDKNGSISLEEMR-----QALAKDLPWKLKES-----RVLEILQAIDCNTDGLVDFSEFVAAT  334 (429)
Q Consensus       265 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~-----~~l~~~~~~~~~~~-----~~~~l~~~~d~~~~g~I~~~eF~~~~  334 (429)
                      .+++++.+++++|..+|.|++|+|+.+||.     .++ +.+|..++..     ++..++..+|.|++|.|+|+||+..+
T Consensus        10 ~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~~~~~~l-~~~g~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EF~~~~   88 (191)
T 1uhk_A           10 DNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVI-NNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGW   88 (191)
T ss_dssp             TCHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHH-HTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHH
T ss_pred             CCHHHHHHHHHHHhhccCCCCCcCcHHHHHHHHHHHHH-HHcCCCchhHHHHHHHHHHHHHHhCcCCCCcCcHHHHHHHH
Confidence            367888999999999999999999999999     677 5589888887     68999999999999999999999877


Q ss_pred             hhhhhhc-----ccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHH
Q 014171          335 LHVHQLE-----EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFR  403 (429)
Q Consensus       335 ~~~~~~~-----~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~  403 (429)
                      .......     ..........++.+|+.+|+|++|+|+.+||+.++...|.      +..++..+|.|+||.|+|+||+
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~~eF~  168 (191)
T 1uhk_A           89 KKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMT  168 (191)
T ss_dssp             HHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHH
T ss_pred             HHHhcchhhhhhhhhHHHHHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence            6543211     1111111112348999999999999999999999977663      8899999999999999999999


Q ss_pred             HHHHhccccCCCCCCCCCC
Q 014171          404 RLLRTASISSRNVPPSPSG  422 (429)
Q Consensus       404 ~~~~~~~~~~~~~~~~~~~  422 (429)
                      .++.....+.+++.|+.=|
T Consensus       169 ~~~~~~~~s~d~~~~g~~g  187 (191)
T 1uhk_A          169 RQHLGFWYTMDPACEKLYG  187 (191)
T ss_dssp             HHHHHHHTTCCGGGTTTTT
T ss_pred             HHHHHHhcCCCCCCccccC
Confidence            9999999888877777443

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A

Probab=99.87  E-value=2e-22  Score=169.26  Aligned_cols=146  Identities=29%  Similarity=0.499  Sum_probs=124.8

Q ss_pred             hhcccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhh
Q 014171          261 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL  340 (429)
Q Consensus       261 ~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~  340 (429)
                      |...++++++++++++|..+|.|++|.|+.+||..++.. +|..++..++..++..+|.+++|.|+|+||+..+......
T Consensus         1 m~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~   79 (153)
T 3ox6_A            1 MDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRT-MGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLA   79 (153)
T ss_dssp             CCSCCCHHHHHHHHHHHHHHHHHCSSSCCHHHHHHHHHH-TTCCCCHHHHHHHHHHHHTTSTTCCCHHHHHHHHHHHHTT
T ss_pred             CcccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH-cCCCCCHHHHHHHHHHhCCCCCccCcHHHHHHHHHHHhhc
Confidence            345678999999999999999999999999999999954 8999999999999999999999999999999877544322


Q ss_pred             cccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcC-CC------CHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          341 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL-KG------SIDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       341 ~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~-~~------~~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                      .... ......+..+|+.+|+|++|+|+.+||+.++.. .|      +++.++..+|.|++|.|+|+||+.+|++
T Consensus        80 ~~~~-~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~k  153 (153)
T 3ox6_A           80 ETAD-MIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR  153 (153)
T ss_dssp             CCHH-HHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHTCC
T ss_pred             cccc-cccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhC
Confidence            2111 111346888999999999999999999999887 55      3899999999999999999999998753

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A

Probab=99.87  E-value=5.6e-22  Score=169.72  Aligned_cols=142  Identities=28%  Similarity=0.463  Sum_probs=123.5

Q ss_pred             cccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcc
Q 014171          263 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE  342 (429)
Q Consensus       263 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~  342 (429)
                      ..++++++.+++++|..+|.|++|.|+.+||..++. .+|..++..++..++..+|.|++|.|+|+||+..+....... 
T Consensus        20 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~-   97 (169)
T 3qrx_A           20 VGLTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMR-ALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGER-   97 (169)
T ss_dssp             CCCCHHHHHHHHHHHHHHCTTCCSEECHHHHHHHHH-HTSCCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHH-
T ss_pred             CCCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-HcCCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHhccc-
Confidence            356888999999999999999999999999999994 589999999999999999999999999999998776443221 


Q ss_pred             cccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       343 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                          .....+..+|+.+|+|++|+|+.+||+.++...|.      ++.++..+|.|+||.|+|+||+.+|++..
T Consensus        98 ----~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~  167 (169)
T 3qrx_A           98 ----DSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKTS  167 (169)
T ss_dssp             ----HHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCCSSSSCBCHHHHHHHHC---
T ss_pred             ----CcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHhcc
Confidence                11346788999999999999999999999987763      89999999999999999999999998654

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...

Probab=99.87  E-value=9.4e-22  Score=166.84  Aligned_cols=146  Identities=26%  Similarity=0.470  Sum_probs=124.3

Q ss_pred             hhcccchHHHhhhhccccccCCCC-CCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhh
Q 014171          261 LASTLDDEELADLRDQFDAIDVDK-NGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ  339 (429)
Q Consensus       261 ~~~~~~~~~~~~l~~~F~~~D~~~-~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~  339 (429)
                      +...++++++.+++++|..+|.|+ +|.|+.+||..++.. +|..++..++..++..+|.|++|.|+|+||+..+.....
T Consensus         8 ~~~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~   86 (161)
T 1dtl_A            8 AVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRM-LGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMK   86 (161)
T ss_dssp             GGGGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHHH-TTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC
T ss_pred             HHhhCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHH-cCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhc
Confidence            345678899999999999999999 999999999999954 899999999999999999999999999999987765432


Q ss_pred             hcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          340 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       340 ~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                      ...  .......+..+|+.+|+|++|+|+.+||+.++...|.      +..++..+|.|+||.|+|+||+.+|.+.
T Consensus        87 ~~~--~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~  160 (161)
T 1dtl_A           87 DDS--KGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGV  160 (161)
T ss_dssp             -------CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHC-
T ss_pred             ccc--cchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHcC
Confidence            100  1112356889999999999999999999999988873      8899999999999999999999999753

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A

Probab=99.87  E-value=4.1e-22  Score=166.24  Aligned_cols=141  Identities=28%  Similarity=0.504  Sum_probs=122.4

Q ss_pred             hhcccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhh
Q 014171          261 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL  340 (429)
Q Consensus       261 ~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~  340 (429)
                      |...++++++.+++++|..+|.|++|+|+.+||..++.. +|..++..++..++..+|.+++|.|+|+||+..+......
T Consensus         1 m~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~   79 (147)
T 4ds7_A            1 MSQNLTEEQIAEFKEAFALFDKDNSGSISASELATVMRS-LGLSPSEAEVADLMNEIDVDGNHAIEFSEFLALMSRQLKC   79 (147)
T ss_dssp             ---CCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHHHHHT
T ss_pred             CCCcCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHH-hCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHhccC
Confidence            346778999999999999999999999999999999955 8999999999999999999999999999999877544222


Q ss_pred             cccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          341 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       341 ~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                      ..     ....+..+|+.+|+|++|+|+.+||+.++...|.      +..++..+| |++|.|+|+||+.+|++
T Consensus        80 ~~-----~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~l~k  147 (147)
T 4ds7_A           80 ND-----SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREVS-DGSGEINIKQFAALLSK  147 (147)
T ss_dssp             HH-----HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHS-SSCSSEEHHHHHHHTTC
T ss_pred             CC-----cHHHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHhC
Confidence            11     1346888999999999999999999999987763      888999999 99999999999998863

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A

Probab=99.87  E-value=7.5e-22  Score=167.37  Aligned_cols=141  Identities=23%  Similarity=0.407  Sum_probs=124.8

Q ss_pred             hcccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhc
Q 014171          262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE  341 (429)
Q Consensus       262 ~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~  341 (429)
                      ...++++++.+++++|..+|.|++|+|+.+||..++.. +|..++..++..++..+|.+++|.|+|+||+..+.......
T Consensus        14 ~~~l~~~~~~~l~~~F~~~D~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~   92 (161)
T 3fwb_A           14 NSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKA-LGFELPKREILDLIDEYDSEGRHLMKYDDFYIVMGEKILKR   92 (161)
T ss_dssp             TTTSCHHHHHHHHHHHHHHCTTSSSEECHHHHHHHHHH-TTCCCCHHHHHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTC
T ss_pred             CCCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-cCCCCCHHHHHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcC
Confidence            34678899999999999999999999999999999955 89999999999999999999999999999998776443222


Q ss_pred             ccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          342 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       342 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                      .  .   ...+..+|+.+|+|++|+|+.+||+.++...|.      ++.++..+|.|++|.|+|+||+.+|++
T Consensus        93 ~--~---~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~  160 (161)
T 3fwb_A           93 D--P---LDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIAICTD  160 (161)
T ss_dssp             C--H---HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCSSSSSSEEHHHHHHHHHH
T ss_pred             C--c---HHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence            1  1   346888999999999999999999999987763      899999999999999999999999975

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A

Probab=99.86  E-value=6.8e-22  Score=167.26  Aligned_cols=144  Identities=20%  Similarity=0.368  Sum_probs=122.8

Q ss_pred             cccchHHHhhhhccccccC-CCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhc
Q 014171          263 STLDDEELADLRDQFDAID-VDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE  341 (429)
Q Consensus       263 ~~~~~~~~~~l~~~F~~~D-~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~  341 (429)
                      ..++++++.+++++|..+| .|++|+|+.+||..++.. +|..++..++..++..+|.+++|.|+|+||+..+.......
T Consensus         5 ~~l~~~~~~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~   83 (158)
T 2jnf_A            5 SKLSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEV-LGIQQTKSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEE   83 (158)
T ss_dssp             TTSCHHHHHHHHHHHHHSBCSSSCSSEEHHHHHHHHHH-TTCSCSHHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCC
T ss_pred             hhCCHHHHHHHHHHHHHhCCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccc
Confidence            3567888999999999999 999999999999999955 89999999999999999999999999999998876543221


Q ss_pred             ccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          342 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       342 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                      .. .......++.+|+.+|+|++|+|+.+||+.++...|.      +..++..+|.|+||.|+|+||+.+|.+
T Consensus        84 ~~-~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  155 (158)
T 2jnf_A           84 VN-PEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGVMTG  155 (158)
T ss_dssp             CC-TTTTSSTHHHHHHHHCSSSSSSEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCSSCCSEECSHHHHHHTSS
T ss_pred             cc-hhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCcCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence            00 0000134788999999999999999999999987663      889999999999999999999999875

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5

Probab=99.86  E-value=1.5e-21  Score=169.44  Aligned_cols=153  Identities=16%  Similarity=0.216  Sum_probs=128.5

Q ss_pred             cchHHHhhhhcccccc-CCCCCCcccHHHHHHHHHhhCC----CCccHHHHHHH-----------HHHhcCCCCCcccHH
Q 014171          265 LDDEELADLRDQFDAI-DVDKNGSISLEEMRQALAKDLP----WKLKESRVLEI-----------LQAIDCNTDGLVDFS  328 (429)
Q Consensus       265 ~~~~~~~~l~~~F~~~-D~~~~G~i~~~el~~~l~~~~~----~~~~~~~~~~l-----------~~~~d~~~~g~I~~~  328 (429)
                      +++.+.++++.+|..+ |.|++|+|+.+||..++.. ++    ..++..++..+           |..+|.|++|.|+|+
T Consensus         2 ls~~~~~~l~~~F~~~~D~d~dG~i~~~E~~~~l~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~dG~I~~~   80 (185)
T 2sas_A            2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTR-YKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWE   80 (185)
T ss_dssp             CCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHH-HHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHH
T ss_pred             cCHHHHHHHHHHHHHheeCCCCCeEcHHHHHHHHHH-HHHhhcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCeEcHH
Confidence            4677888999999999 9999999999999999855 56    67788888755           999999999999999


Q ss_pred             HHHHHHhhhhhh---cccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC----CHHHHHHHhCCCCCCcccHHH
Q 014171          329 EFVAATLHVHQL---EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSE  401 (429)
Q Consensus       329 eF~~~~~~~~~~---~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~----~~~~~~~~~d~~~dg~i~~~e  401 (429)
                      ||+.++......   ...........+..+|+.+|+|++|+|+.+||+.++...|    ++..+|..+|.|+||.|+|+|
T Consensus        81 Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g~~~~~~~~~~~~~D~d~dG~i~~~e  160 (185)
T 2sas_A           81 EYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQCADVPAVYNVITDGGKVTFDLNR  160 (185)
T ss_dssp             HHHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCCCCSSHHHHHHHHHTTTTSCCSHHH
T ss_pred             HHHHHHHHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhCCCHHHHHHHHHHhcCCCCCcCcHHH
Confidence            999887654322   1111111235688999999999999999999999998764    599999999999999999999


Q ss_pred             HHHHHHhccccCCCCCCC
Q 014171          402 FRRLLRTASISSRNVPPS  419 (429)
Q Consensus       402 f~~~~~~~~~~~~~~~~~  419 (429)
                      |+.++.....+.+ ..|+
T Consensus       161 f~~~~~~~~~s~~-~~~~  177 (185)
T 2sas_A          161 YKELYYRLLTSPA-ADAG  177 (185)
T ss_dssp             HHHHHHHHHHCSS-CSGG
T ss_pred             HHHHHHHHhcCCC-CCCc
Confidence            9999999998888 6654

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5

Probab=99.86  E-value=1.5e-21  Score=168.06  Aligned_cols=152  Identities=16%  Similarity=0.203  Sum_probs=126.1

Q ss_pred             chHHHhhhhccccccCCCCCCcccHHHHHH----HHHhhCCCCccHHHHH-----------HHHHHhcCCCCCcccHHHH
Q 014171          266 DDEELADLRDQFDAIDVDKNGSISLEEMRQ----ALAKDLPWKLKESRVL-----------EILQAIDCNTDGLVDFSEF  330 (429)
Q Consensus       266 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~----~l~~~~~~~~~~~~~~-----------~l~~~~d~~~~g~I~~~eF  330 (429)
                      +++++++++++|..+|.|++|+|+.+||..    ++ +.+|..++..++.           .+|..+|.|++|.|+|+||
T Consensus         2 s~~~~~~l~~~F~~~D~d~~G~i~~~el~~~~~~~l-~~~g~~~~~~~~~~l~~~~~~~~~~lf~~~D~d~dg~i~~~Ef   80 (176)
T 1nya_A            2 TAIASDRLKKRFDRWDFDGNGALERADFEKEAQHIA-EAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQF   80 (176)
T ss_dssp             CSHHHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHH-HHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHH
T ss_pred             cHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHH-HHcCCCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHH
Confidence            567889999999999999999999999999    45 5589999988887           8899999999999999999


Q ss_pred             HHHHhhhhhhccc--ccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC----CHHHHHHHhCCCCCCcccHHHHHH
Q 014171          331 VAATLHVHQLEEH--DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRR  404 (429)
Q Consensus       331 ~~~~~~~~~~~~~--~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~----~~~~~~~~~d~~~dg~i~~~ef~~  404 (429)
                      +.++.........  ........++.+|+.+|+|++|+|+.+||+.++...|    ++..+|..+|.|+||.|+|+||+.
T Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~D~d~dg~i~~~ef~~  160 (176)
T 1nya_A           81 IRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALGMSKAEAAEAFNQVDTNGNGELSLDELLT  160 (176)
T ss_dssp             HHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTTCCHHHHHHHHHHHCTTCSSEEEHHHHHH
T ss_pred             HHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhCCCHHHHHHHHHHhCCCCCCCCcHHHHHH
Confidence            9877654332221  0111124588999999999999999999999987765    378899999999999999999999


Q ss_pred             HHHhccccCCCCCCC
Q 014171          405 LLRTASISSRNVPPS  419 (429)
Q Consensus       405 ~~~~~~~~~~~~~~~  419 (429)
                      ++..... .+++.|.
T Consensus       161 ~~~~~~~-~~~~~pl  174 (176)
T 1nya_A          161 AVRDFHF-GRLDVEL  174 (176)
T ss_dssp             HHSCCSS-SCSSCCS
T ss_pred             HHHHHhc-CCCCCcc
Confidence            9998876 5555553

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...

Probab=99.86  E-value=2.4e-21  Score=164.38  Aligned_cols=146  Identities=27%  Similarity=0.473  Sum_probs=126.3

Q ss_pred             hhcccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhh
Q 014171          261 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL  340 (429)
Q Consensus       261 ~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~  340 (429)
                      +...++++++.+++++|..+|.|++|.|+..||..++.. +|..++..++..++..+|.+++|.|+|+||+..+......
T Consensus        10 ~~~~ls~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~   88 (162)
T 1top_A           10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRM-LGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKE   88 (162)
T ss_dssp             HHHHSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHHH-TTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHH
T ss_pred             hhhhcCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH-cCCCCCHHHHHHHHHHHcCCCCCcEeHHHHHHHHHHHhcc
Confidence            445678999999999999999999999999999999954 8999999999999999999999999999999877544321


Q ss_pred             cccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          341 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       341 ~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                      ..  .......+..+|+.+|+|++|+|+.+||+.++...|.      +..++..+|.|+||.|+|+||+.+|.+.
T Consensus        89 ~~--~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  161 (162)
T 1top_A           89 DA--KGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV  161 (162)
T ss_dssp             HH--HHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHSC
T ss_pred             cc--ccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhc
Confidence            11  0112456889999999999999999999999988773      8889999999999999999999999753

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A

Probab=99.86  E-value=8.2e-22  Score=170.44  Aligned_cols=143  Identities=27%  Similarity=0.530  Sum_probs=121.3

Q ss_pred             hcccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhc
Q 014171          262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE  341 (429)
Q Consensus       262 ~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~  341 (429)
                      ...++++++.+++++|..+|.|++|.|+.+||..++.. +|..++..++..++..+|.|++|.|+|+||+..+.......
T Consensus         2 ~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~-~~~~~~~~~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~   80 (179)
T 2f2o_A            2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS-LGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDT   80 (179)
T ss_dssp             ----CCSHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHH-TTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHH
T ss_pred             cccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-cCCCCCHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHccCc
Confidence            34567888999999999999999999999999999954 89999999999999999999999999999998775432211


Q ss_pred             ccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC------CHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          342 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       342 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                           .....+..+|+.+|+|++|+|+.+||+.++...|      ++..++..+|.|+||.|+|+||+.+|....
T Consensus        81 -----~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~  150 (179)
T 2f2o_A           81 -----DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTAKG  150 (179)
T ss_dssp             -----HHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC--CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHSCC--
T ss_pred             -----ccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHcC
Confidence                 1134688899999999999999999999998776      388999999999999999999999998664

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=99.86  E-value=4.5e-22  Score=165.21  Aligned_cols=135  Identities=19%  Similarity=0.372  Sum_probs=118.3

Q ss_pred             chHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhccccc
Q 014171          266 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS  345 (429)
Q Consensus       266 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~  345 (429)
                      +++++.+++++|..+|.|++|+|+.+||..++.. +|..++..++..++..+|.+++|.|+|+||+..+.......  ..
T Consensus         1 ~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~--~~   77 (142)
T 2bl0_C            1 GDDQVSEFKEAFELFDSERTGFITKEGLQTVLKQ-FGVRVEPAAFNEMFNEADATGNGKIQFPEFLSMMGRRMKQT--TS   77 (142)
T ss_dssp             CCHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH-HTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTC--CC
T ss_pred             CHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCC--Ch
Confidence            3567889999999999999999999999999955 79999999999999999999999999999998876532211  11


Q ss_pred             HHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHH
Q 014171          346 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLR  407 (429)
Q Consensus       346 ~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~  407 (429)
                         ...+..+|+.+|+|++|+|+.+||+.++...|.      ++.++..+| |++|.|+|+||+.+|+
T Consensus        78 ---~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~  141 (142)
T 2bl0_C           78 ---EDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLGITE-TEKGQIRYDNFINTMF  141 (142)
T ss_dssp             ---HHHHHHHHHHTCCSSCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHHC-CSSSEECSHHHHTTTC
T ss_pred             ---HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCcEeHHHHHHHHc
Confidence               346889999999999999999999999987763      889999999 9999999999998774

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A

Probab=99.86  E-value=5.4e-22  Score=165.91  Aligned_cols=136  Identities=18%  Similarity=0.257  Sum_probs=115.1

Q ss_pred             HHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHh-cCCCCCcccHHHHHHHHhhhhhh---cccc
Q 014171          269 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAI-DCNTDGLVDFSEFVAATLHVHQL---EEHD  344 (429)
Q Consensus       269 ~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~-d~~~~g~I~~~eF~~~~~~~~~~---~~~~  344 (429)
                      ++++++++|..+|.|++|+|+.+||..++.. +|..++..++..++..+ |.+++|.|+|+||+..+......   ....
T Consensus         2 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~   80 (148)
T 1m45_A            2 ATRANKDIFTLFDKKGQGAIAKDSLGDYLRA-IGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKA   80 (148)
T ss_dssp             -CCCCTTCHHHHCTTCCSEEEGGGHHHHHHH-TTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCC
T ss_pred             hHHHHHHHHHHHCCCCCCCCCHHHHHHHHHH-hCCCCCHHHHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhccccccc
Confidence            4567899999999999999999999999954 89999999999999999 99999999999999887655211   1111


Q ss_pred             cHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          345 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       345 ~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                      .   ...+..+|+.+|+|++|+|+.+||+.++...|.      +..++..+|.|+||.|+|+||+.+|.+
T Consensus        81 ~---~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~d~dg~i~~~eF~~~~~~  147 (148)
T 1m45_A           81 K---TEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVLR  147 (148)
T ss_dssp             C---THHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHC
T ss_pred             c---HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence            1   246888999999999999999999999987773      889999999999999999999999874

>2lvv_A Flagellar calcium-binding protein TB-24; EF-hand, metal binding protein; NMR {Trypanosoma brucei brucei}

Probab=99.85  E-value=4.6e-22  Score=178.98  Aligned_cols=147  Identities=18%  Similarity=0.249  Sum_probs=125.2

Q ss_pred             HhhhcccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHh---------cCCCCCcccHHH
Q 014171          259 RALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAI---------DCNTDGLVDFSE  329 (429)
Q Consensus       259 ~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~---------d~~~~g~I~~~e  329 (429)
                      ..+...++++++.+++++|..+|.|++|+|+.+||..++.+.+|..++..++..++..+         |.|++|.|+|+|
T Consensus        39 ~~l~~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~lg~~~~~~~~~~~~~~~f~~~~~~~~D~d~~G~I~~~E  118 (226)
T 2lvv_A           39 CAIPRDKDAESKSRRIELFKQFDTNGTGKLGFREVLDGCYGILKLDEFTTHLPDIVQRAFDKAKDLGNKVKGVGEEDLVE  118 (226)
T ss_dssp             HHSCSSCCHHHHHHHHHHHHHHGGGSCSCBCSHHHHHHHHHTTCCTTTSSSCHHHHHHHHHHHHHHHHHHSCCCCCSCBC
T ss_pred             HHhchhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhcccCCCCCCCCcCCHHH
Confidence            33556778999999999999999999999999999997767788888877787777777         999999999999


Q ss_pred             HHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCC---C----CHHHHHHHhCCCCCCcccHHHH
Q 014171          330 FVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK---G----SIDPLLEEADIDKDGRISLSEF  402 (429)
Q Consensus       330 F~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~---~----~~~~~~~~~d~~~dg~i~~~ef  402 (429)
                      |+.++........      ...+..+|+.||+|++|+|+.+||+.++...   +    ++..+|..+|.|+||.|+|+||
T Consensus       119 F~~~~~~~~~~~~------~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~g~~~~e~~~~~~~~D~d~dG~Is~~EF  192 (226)
T 2lvv_A          119 FLEFRLMLCYIYD------IFELTVMFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDATTVFNEIDTNGSGVVTFDEF  192 (226)
T ss_dssp             HHHHHHHHHHHHH------HHHHHHHHHHHSCSSCCEECHHHHHHHHHHHHHHTCCCCSCHHHHHHHCCSCSSCEEHHHH
T ss_pred             HHHHHHHHHhccC------HHHHHHHHHHHcCCCCCeEcHHHHHHHHHHHhhcCCCHHHHHHHHHHhCCCCCCcEeHHHH
Confidence            9986544433322      2468899999999999999999999998654   3    4899999999999999999999


Q ss_pred             HHHHHhccc
Q 014171          403 RRLLRTASI  411 (429)
Q Consensus       403 ~~~~~~~~~  411 (429)
                      +.+|++...
T Consensus       193 ~~~~~~~~~  201 (226)
T 2lvv_A          193 SCWAVTKKL  201 (226)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHhcCC
Confidence            999987664

>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*

Probab=99.85  E-value=4.2e-21  Score=160.41  Aligned_cols=138  Identities=17%  Similarity=0.277  Sum_probs=120.7

Q ss_pred             cchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHh---cCCCCCcccHHHHHHHHhhhhhhc
Q 014171          265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAI---DCNTDGLVDFSEFVAATLHVHQLE  341 (429)
Q Consensus       265 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~---d~~~~g~I~~~eF~~~~~~~~~~~  341 (429)
                      ++++++.+++++|..+|.|++|+|+.+||..++.. +|..++..++..++..+   |.++ |.|+|+||+..+.......
T Consensus         2 l~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~-~~~~~~~~~~~~l~~~~~~~d~~~-g~i~~~eF~~~~~~~~~~~   79 (149)
T 2mys_C            2 FSKAAADDFKEAFLLFDRTGDAKITASQVGDIARA-LGQNPTNAEINKILGNPSKEEMNA-AAITFEEFLPMLQAAANNK   79 (149)
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHhhhccccC-CcCcHHHHHHHHHHHhccC
Confidence            56788899999999999999999999999999954 89999999999999999   9999 9999999998776542222


Q ss_pred             ccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          342 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       342 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                      ...   ....+..+|+.+|+|++|+|+.+||+.++...|.      +..++.. |.|++|.|+|+||+.+|.+
T Consensus        80 ~~~---~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~-d~~~dg~i~~~eF~~~~~~  148 (149)
T 2mys_C           80 DQG---TFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKG-QEDSNGCINYEAFVKHIMS  148 (149)
T ss_pred             Ccc---hHHHHHHHHHHhCCCCCceEcHHHHHHHHHHhCCCCCHHHHHHHHhh-CCCCCCcEeHHHHHHHHhc
Confidence            211   1356889999999999999999999999987763      8889999 9999999999999999875

>2hpk_A Photoprotein berovin; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 2.00A {Beroe abyssicola}

Probab=99.85  E-value=7.7e-22  Score=175.12  Aligned_cols=155  Identities=19%  Similarity=0.243  Sum_probs=117.7

Q ss_pred             cccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCC--CccHHHHHHHH-------HHhcCCCCCcccHHHHHHH
Q 014171          263 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW--KLKESRVLEIL-------QAIDCNTDGLVDFSEFVAA  333 (429)
Q Consensus       263 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~--~~~~~~~~~l~-------~~~d~~~~g~I~~~eF~~~  333 (429)
                      ..++++++.+++++|..+|.|++|+|+.+||..++.. +|.  .++..++..++       ..+|.|++|.|+|+||+..
T Consensus        28 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~-~~~~~~~~~~~~~~l~~~~~~lf~~~D~d~dg~i~~~EF~~~  106 (208)
T 2hpk_A           28 EDLHPKMLSRLYKRFDTFDLDSDGKMEMDEVLYWPDR-MRQLVNATDEQVEKMRDAVRVFFLHKGVEPVNGLLREDWVEA  106 (208)
T ss_dssp             --------CHHHHHHHHHCTTCSSEECHHHHTHHHHH-HHHHSCCCHHHHHHHHHHHHHHHHHTTCBTTTBEEGGGHHHH
T ss_pred             HHcCHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHH-HHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCeEcHHHHHHH
Confidence            4567888899999999999999999999999999955 676  78899999999       9999999999999999987


Q ss_pred             Hhh----hh--hhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC----CHHHHHHHhCCCCCCcccHHHHH
Q 014171          334 TLH----VH--QLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFR  403 (429)
Q Consensus       334 ~~~----~~--~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~----~~~~~~~~~d~~~dg~i~~~ef~  403 (429)
                      +..    ..  .+.... ....+.++.+|+.+|+|++|+|+.+||+.++...|    +++.++..+|.|+||.|+|+||+
T Consensus       107 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~~~~D~d~dG~I~~~EF~  185 (208)
T 2hpk_A          107 NRVFAEAERERERRGEP-SLIALLSNSYYDVLDDDGDGTVDVDELKTMMKAFDVPQEAAYTFFEKADTDKSGKLERTELV  185 (208)
T ss_dssp             HHHHHHHHHHHHHTTCC-CHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTSCTTHHHHHHHHHCTTCCSSBCHHHHH
T ss_pred             HHHHhhhhhhhhccCCh-HHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCcCHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence            751    00  111111 11123378899999999999999999999986654    48999999999999999999999


Q ss_pred             HHHHhccccC-CCCCCC
Q 014171          404 RLLRTASISS-RNVPPS  419 (429)
Q Consensus       404 ~~~~~~~~~~-~~~~~~  419 (429)
                      .++.....+. ++..|+
T Consensus       186 ~~~~~~~~~~~d~~~~g  202 (208)
T 2hpk_A          186 HLFRKFWMEPYDPQWDG  202 (208)
T ss_dssp             HHHHHHHC---------
T ss_pred             HHHHHHhcCCCCCCCcc
Confidence            9999988777 766665

>3j04_B Myosin regulatory light chain 2, smooth muscle MA isoform; phosphorylation, 2D crystalline arrays, myosin regulation, M light chains, structural protein; 20.00A {Gallus gallus}

Probab=99.85  E-value=1.5e-21  Score=162.27  Aligned_cols=135  Identities=24%  Similarity=0.452  Sum_probs=117.6

Q ss_pred             cchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccc
Q 014171          265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD  344 (429)
Q Consensus       265 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~  344 (429)
                      ++++++.+++++|..+|.|++|+|+.+||..++. .+|..++..++..++..    ++|.|+|+||+..+........  
T Consensus         1 ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~~g~~~~~~~~~~~~~~----~~g~i~~~eF~~~~~~~~~~~~--   73 (143)
T 3j04_B            1 FDQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLA-SMGKNPTDEYLEGMMSE----APGPINFTMFLTMFGEKLNGTD--   73 (143)
T ss_dssp             CCHHHHHHHHHHHTTTCSSCTTCCCHHHHHHHHH-HTSCCCCHHHHHTTTTT----SSSCCCHHHHHHHHHHTTTSSC--
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCCcCHHHHHHHHH-HhCCCCCHHHHHHHHHh----CCCCcCHHHHHHHHHHHhccCC--
Confidence            4678899999999999999999999999999995 48999999999888766    8999999999988764432211  


Q ss_pred             cHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          345 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       345 ~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                      .   ...+..+|+.+|+|++|+|+.+||+.++...|.      ++.++..+|.|+||.|+|+||+.+|++.
T Consensus        74 ~---~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~  141 (143)
T 3j04_B           74 P---EDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFTRILKHG  141 (143)
T ss_dssp             C---HHHHHHHHTTSCSSSCCCCCTTTHHHHHHTSSSCCCHHHHHHHHHHTTCCSSSCCCSTHHHHHHHSS
T ss_pred             c---HHHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHhcc
Confidence            1   246889999999999999999999999988873      8999999999999999999999999864

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A

Probab=99.85  E-value=3.3e-21  Score=172.55  Aligned_cols=149  Identities=16%  Similarity=0.160  Sum_probs=128.0

Q ss_pred             hhhhhHHHHHHHHhhhcccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCccc
Q 014171          247 FVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD  326 (429)
Q Consensus       247 ~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~  326 (429)
                      +.....+++.....+...++++++++++++|+.+|.|++|+|+.+||..++ +.+|..++..+++.+++.+|.|++|.|+
T Consensus        27 ~~~~~~~~~~~~~~~~~~l~~~e~~~l~~~F~~~D~d~~G~I~~~El~~~l-~~~g~~~~~~~~~~l~~~~D~d~dg~I~  105 (220)
T 3sjs_A           27 YQMPPSVRNTWWFPLLNTIPLDQYTRIYQWFMGVDRDRSGTLEINELMMGQ-FPGGIRLSPQTALRMMRIFDTDFNGHIS  105 (220)
T ss_dssp             HHSCHHHHTSTTGGGGGGCCHHHHHHHHHHHHHHCTTCCSSBCHHHHHHCC-BGGGBCCCHHHHHHHHHHHCTTCSSCBC
T ss_pred             cCCChhHHHHHHHHHHhcCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHH-HHcCCCCCHHHHHHHHHHhCCCCCCcCC
Confidence            344444555555566778899999999999999999999999999999999 4578999999999999999999999999


Q ss_pred             HHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHH
Q 014171          327 FSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLS  400 (429)
Q Consensus       327 ~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~  400 (429)
                      |+||+..+...            ..+..+|+.+|+|++|+|+.+||+.++...|.      ++.++..+| |+||.|+|+
T Consensus       106 ~~EF~~~~~~~------------~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~l~~~~d-d~dg~I~~~  172 (220)
T 3sjs_A          106 FYEFMAMYKFM------------ELAYNLFVMNARARSGTLEPHEILPALQQLGFYINQRTSLLLHRLFA-RGMAFCDLN  172 (220)
T ss_dssp             HHHHHHHHHHH------------HHHHHHHHHHCCSSTTEECHHHHHHHHHHHTCCCCHHHHHHHHHHHC---CCSEEHH
T ss_pred             HHHHHHHHHHH------------HHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHhc-CCCCcCcHH
Confidence            99999876543            24778999999999999999999999987763      889999999 999999999


Q ss_pred             HHHHHHHhc
Q 014171          401 EFRRLLRTA  409 (429)
Q Consensus       401 ef~~~~~~~  409 (429)
                      ||++++...
T Consensus       173 eF~~~~~~l  181 (220)
T 3sjs_A          173 CWIAICAFA  181 (220)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            999988653

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...

Probab=99.85  E-value=1.5e-21  Score=164.84  Aligned_cols=140  Identities=21%  Similarity=0.382  Sum_probs=122.5

Q ss_pred             ccchHHHhhhhccccccCC--CCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhc
Q 014171          264 TLDDEELADLRDQFDAIDV--DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE  341 (429)
Q Consensus       264 ~~~~~~~~~l~~~F~~~D~--~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~  341 (429)
                      .++++++.+++++|..+|.  |++|+|+.+||..++.. +|..++..++..+ ..+|.+++|.|+|+||+..+...... 
T Consensus         2 ~ls~~~~~~l~~~F~~~D~~~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~-   78 (156)
T 1wdc_C            2 KLSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRC-LGINPRNEDVFAV-GGTHKMGEKSLPFEEFLPAYEGLMDC-   78 (156)
T ss_dssp             -CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHHHH-TTCCCCHHHHHHT-TCCSSTTSCEECHHHHHHHHHHHTTS-
T ss_pred             CCCHHHHHHHHHHHHHHccCCCCCCCCcHHHHHHHHHH-cCCCCCHHHHHHH-HhhCCCCCCeeeHHHHHHHHHHHhhc-
Confidence            3578889999999999999  99999999999999954 8999999999999 99999999999999999887655332 


Q ss_pred             ccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHH--hCCCCCCcccHHHHHHHHHhc
Q 014171          342 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEE--ADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       342 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~--~d~~~dg~i~~~ef~~~~~~~  409 (429)
                      ....   ...++.+|+.+|+|++|+|+.+||+.++...|.      +..++..  +|.|++|.|+|+||+.+|.+.
T Consensus        79 ~~~~---~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~~  151 (156)
T 1wdc_C           79 EQGT---FADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMAG  151 (156)
T ss_dssp             CCCC---HHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHHC
T ss_pred             cCCh---HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCCCcEeHHHHHHHHhcC
Confidence            0111   246889999999999999999999999987763      8899999  999999999999999999874

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}

Probab=99.84  E-value=9.7e-22  Score=173.62  Aligned_cols=152  Identities=25%  Similarity=0.363  Sum_probs=125.3

Q ss_pred             ccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcc-
Q 014171          264 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE-  342 (429)
Q Consensus       264 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~-  342 (429)
                      .++++++++++++|..+|.|++|+|+.+||..+  ..+|..++   +..++..+|.|++|.|+|+||+..+........ 
T Consensus        22 ~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~--~~lg~~~~---~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~~~~~   96 (202)
T 2bec_A           22 GFSQASLLRLHHRFRALDRNKKGYLSRMDLQQI--GALAVNPL---GDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDE   96 (202)
T ss_dssp             CCCHHHHHHHHHHHHHHCSSCSSCCCHHHHHTC--HHHHHSTT---HHHHHHTTSCSSCCCCCHHHHHHHHGGGSCCCHH
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHH--HhcCCCcc---HHHHHHHhCCCCCCcCcHHHHHHHHHHhcccchh
Confidence            567889999999999999999999999999998  33666654   899999999999999999999988765532100 


Q ss_pred             ----------cccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCC-CC------HHHHHHH----hCCCCCCcccHHH
Q 014171          343 ----------HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK-GS------IDPLLEE----ADIDKDGRISLSE  401 (429)
Q Consensus       343 ----------~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~-~~------~~~~~~~----~d~~~dg~i~~~e  401 (429)
                                .........++.+|+.+|+|++|+|+.+||+.++... |.      ++.++..    +|.|+||.|+|+|
T Consensus        97 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~D~d~dG~Is~~E  176 (202)
T 2bec_A           97 DTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVE  176 (202)
T ss_dssp             HHC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHSCCSCCCHHHHHHHHHHHHHHHCSSCSSSEEHHH
T ss_pred             cccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCCCCcCcHHH
Confidence                      0011124568899999999999999999999999877 62      5666666    9999999999999


Q ss_pred             HHHHHHhccccCCCCCCCC
Q 014171          402 FRRLLRTASISSRNVPPSP  420 (429)
Q Consensus       402 f~~~~~~~~~~~~~~~~~~  420 (429)
                      |+.++.+.+++.+..+|.+
T Consensus       177 F~~~~~~~~~~~~~~~~~~  195 (202)
T 2bec_A          177 FTKSLEKMDVEQKMSIRIL  195 (202)
T ss_dssp             HHHTTTTSCHHHHTSCTTT
T ss_pred             HHHHHHHhCccceEEEeec
Confidence            9999999998887777553

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=99.84  E-value=8e-22  Score=172.21  Aligned_cols=141  Identities=35%  Similarity=0.639  Sum_probs=122.8

Q ss_pred             cccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcc
Q 014171          263 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE  342 (429)
Q Consensus       263 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~  342 (429)
                      ..++++++.+++++|..+|.|++|.|+.+||..+| ..+|..++..++..+|..+|.|++|.|+|+||+..+........
T Consensus         2 ~~ls~~~~~~l~~~F~~~D~d~dG~I~~~E~~~~l-~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~   80 (188)
T 1s6i_A            2 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGL-KRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLER   80 (188)
T ss_dssp             CSSSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHH-TTTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCC
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHH-HHcCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCH
Confidence            34677888999999999999999999999999999 45899999999999999999999999999999987754432221


Q ss_pred             cccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC----CHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       343 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~----~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      .      ..++.+|+.+|+|++|+|+.+||+.++...|    +++.++..+|.|+||.|+|+||+.+|.+..
T Consensus        81 ~------~~l~~~F~~~D~d~dG~Is~~El~~~l~~~g~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~  146 (188)
T 1s6i_A           81 E------ENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDDMIKEIDQDNDGQIDYGEFAAMMRKRK  146 (188)
T ss_dssp             C------CSTHHHHHHTTTTCSSEEEHHHHHHTTTTTTCCTTHHHHHHHHHCSSSSSEEETTHHHHTTSCCC
T ss_pred             H------HHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHcC
Confidence            1      2467899999999999999999999998775    389999999999999999999999997543

>1q80_A SCP, sarcoplasmic calcium-binding protein; all-alpha, metal binding protein; NMR {Neanthes diversicolor} SCOP: a.39.1.5 PDB: 2scp_A

Probab=99.84  E-value=3.5e-21  Score=165.47  Aligned_cols=149  Identities=18%  Similarity=0.261  Sum_probs=122.5

Q ss_pred             chHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCC----CCccHHH-H--------HHHHHHhcCCCCCcccHHHHHH
Q 014171          266 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP----WKLKESR-V--------LEILQAIDCNTDGLVDFSEFVA  332 (429)
Q Consensus       266 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~----~~~~~~~-~--------~~l~~~~d~~~~g~I~~~eF~~  332 (429)
                      +++++.+++++|..+|.|++|+|+.+||..++.. ++    ..++..+ +        +.++..+|  ++|.|+|+||+.
T Consensus         1 s~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~-~~~~~g~~~~~~~~~~~~~~~~~~~l~~~~D--~~g~i~~~EF~~   77 (174)
T 1q80_A            1 SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAER-FAKESEMKAEHAKVLMDSLTGVWDNFLTAVA--GGKGIDETTFIN   77 (174)
T ss_dssp             CHHHHHHHHHHHHHHCTTCSSEESHHHHHHHHHH-HHHHSSCCTTHHHHHHHHHHHHHHHTGGGTT--TTSCEEHHHHHH
T ss_pred             CHHHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHH-HHHHhCCCCCcHHHHHHHHHHHHHHHHHhcC--CCCeEcHHHHHH
Confidence            3567889999999999999999999999999955 55    7888777 6        35788888  899999999998


Q ss_pred             HHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC----CHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          333 ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       333 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~----~~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                      .+..... ...........++.+|+.+|+|++|+|+.+||+.++...|    +++.++..+|.|+||.|+|+||+.+|+.
T Consensus        78 ~~~~~~~-~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~  156 (174)
T 1q80_A           78 SMKEMVK-NPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGLDKTMAPASFDAIDTNNDGLLSLEEFVIAGSD  156 (174)
T ss_dssp             HHHHHTT-STTCHHHHHTHHHHHHHHHCTTSSSSBCHHHHHHHHHHHTCCGGGHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHcC-cccHHHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCceEeHHHHHHHHHH
Confidence            7765543 1111112235688999999999999999999999986554    4899999999999999999999999999


Q ss_pred             ccccCCCCCCC
Q 014171          409 ASISSRNVPPS  419 (429)
Q Consensus       409 ~~~~~~~~~~~  419 (429)
                      .. +.+++.|+
T Consensus       157 ~~-~~~~~~~g  166 (174)
T 1q80_A          157 FF-MNDGDSTN  166 (174)
T ss_dssp             HH-HCCCCSST
T ss_pred             Hh-ccCcccCC
Confidence            88 77666665

>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B

Probab=99.84  E-value=9.3e-21  Score=161.72  Aligned_cols=138  Identities=20%  Similarity=0.325  Sum_probs=119.3

Q ss_pred             cccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCC-CccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhc
Q 014171          263 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW-KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE  341 (429)
Q Consensus       263 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~-~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~  341 (429)
                      ..++++++.+++.+|..+|.|++|+|+.+||..++.. +|. .++..++..++...    +|.|+|+||+..+.......
T Consensus        17 ~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~~l~~~~----dg~i~~~eF~~~~~~~~~~~   91 (166)
T 2mys_B           17 SMFDETEIEDFKEAFTVIDQNADGIIDKDDLRETFAA-MGRLNVKNEELDAMIKEA----SGPINFTVFLTMFGEKLKGA   91 (166)
T ss_pred             hhCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH-hCCCCCCHHHHHHHHHHC----CCCcCHHHHHHHHHHHhccC
Confidence            3668889999999999999999999999999999954 898 99999999999864    79999999998776432211


Q ss_pred             ccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          342 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       342 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                        ..   ...+..+|+.||+|++|+|+.+||+.++...|.      ++.++..+|.|+||.|+|+||+.+|.+..
T Consensus        92 --~~---~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~I~~~eF~~~~~~~~  161 (166)
T 2mys_B           92 --DP---EDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITHGE  161 (166)
T ss_pred             --Cc---HHHHHHHHHHhCCCCCcceeHHHHHHHHHHcCCCCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHHhcc
Confidence              11   246888999999999999999999999987763      88999999999999999999999998754

>1w7j_B Myosin light chain 1; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Homo sapiens} SCOP: a.39.1.5 PDB: 1w7i_B* 1oe9_B* 3j04_C 1br1_B* 1br4_B* 1i84_T* 3dtp_C 2w4a_C 2w4g_C 2w4h_C

Probab=99.84  E-value=3.4e-22  Score=167.76  Aligned_cols=140  Identities=19%  Similarity=0.330  Sum_probs=113.0

Q ss_pred             ccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCC--CCCcccHHHHHHHHhhhhhhc
Q 014171          264 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN--TDGLVDFSEFVAATLHVHQLE  341 (429)
Q Consensus       264 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~--~~g~I~~~eF~~~~~~~~~~~  341 (429)
                      .++++++.+++++|..+|.|++|+|+.+||..++. .+|..++..++..++..+|.+  ++|.|+|+||+..+.......
T Consensus         3 ~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~~g~~~~~~~~~~l~~~~d~~~~~~g~i~~~eF~~~~~~~~~~~   81 (151)
T 1w7j_B            3 EFNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMR-ALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNR   81 (151)
T ss_dssp             --------CHHHHHHHHCCSSSSEEESTTHHHHHH-HTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC--
T ss_pred             CCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH-HcCCCCCHHHHHHHHHHhCcCcCCCCcCcHHHHHHHHHHHhccC
Confidence            35778889999999999999999999999999995 489999999999999999999  999999999998876543221


Q ss_pred             ccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          342 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       342 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                      ...   ....+..+|+.+|+|++|+|+.+||+.++...|.      ++.++..+| |+||.|+|+||+.+|.+
T Consensus        82 ~~~---~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-~~dg~i~~~eF~~~~~~  150 (151)
T 1w7j_B           82 GQG---TYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHE-DSNGCINYEAFLKHILS  150 (151)
T ss_dssp             ---------CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCC-CTTSEEEHHHHHHHTC-
T ss_pred             CCC---cHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHhcc-CCCCeEeHHHHHHHHhc
Confidence            111   1234678999999999999999999999987773      889999999 99999999999998864

>3cs1_A Flagellar calcium-binding protein; myristoylated, palmitoylated, SEN membrane targeting, EF-hand, cell projection, cilium; 2.00A {Trypanosoma cruzi}

Probab=99.84  E-value=3e-21  Score=172.78  Aligned_cols=163  Identities=18%  Similarity=0.248  Sum_probs=123.8

Q ss_pred             HHhhhcccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHh---------cCCCCCcccHH
Q 014171          258 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAI---------DCNTDGLVDFS  328 (429)
Q Consensus       258 l~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~---------d~~~~g~I~~~  328 (429)
                      ...+...++++++.+++++|..+|.|++|+|+.+||..+|...+|..++..++..++..+         +.|++|.|+|.
T Consensus        35 ~~~~~~~ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~I~~~  114 (219)
T 3cs1_A           35 RQAIPREKTAEAKQRRIELFKKFDKNETGKLCYDEVYSGCLEVLKLDEFTSRVRDITKRAFDKSRTLGSKLENKGSEDFV  114 (219)
T ss_dssp             HHHSCCSSSHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTTCGGGTCSCHHHHHHHHHHHHHHHHHHHHTSCCCSSB
T ss_pred             HHHhcccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHhhhhccCCCCcCCHH
Confidence            344556778899999999999999999999999999999966578888777776665533         34889999999


Q ss_pred             HHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCC-------CCHHHHHHHhCCCCCCcccHHH
Q 014171          329 EFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK-------GSIDPLLEEADIDKDGRISLSE  401 (429)
Q Consensus       329 eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~-------~~~~~~~~~~d~~~dg~i~~~e  401 (429)
                      ||+..+........      ...++.+|+.||+|++|+|+.+||+.++...       .+++.+|..+|.|+||.|+|+|
T Consensus       115 EF~~~~~~~~~~~~------~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~e~~~l~~~~D~d~dG~I~~~E  188 (219)
T 3cs1_A          115 EFLEFRLMLCYIYD------FFELTVMFDEIDASGNMLVDEEEFKRAVPKLEAWGAKVEDPAALFKELDKNGTGSVTFDE  188 (219)
T ss_dssp             CHHHHHHHHHHHHH------HHHHHHHHHTTCSSSSSEEEHHHHHHHHHHHHHHTCCCSCHHHHHHHHCTTSSSEEEHHH
T ss_pred             HHHHHHHHHhccch------HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhcccCCCHHHHHHHHHHhCCCCCCcEeHHH
Confidence            99987654433211      3468899999999999999999999988533       2489999999999999999999


Q ss_pred             HHHHHHhcc--ccCCCCC--CCCCCCCCC
Q 014171          402 FRRLLRTAS--ISSRNVP--PSPSGHRNP  426 (429)
Q Consensus       402 f~~~~~~~~--~~~~~~~--~~~~~~~~~  426 (429)
                      |+.+|.+..  ++.++.+  =.+.+|++|
T Consensus       189 F~~~~~~~~~~~~~~~~~~~~~~~~~~~~  217 (219)
T 3cs1_A          189 FAAWASAVKLDADGDPDNVPESALEHHHH  217 (219)
T ss_dssp             HHHHHHHHHHHHHCCTTSCC---------
T ss_pred             HHHHHHHhCCCCccCccCCCcchhhccCC
Confidence            999998765  3333333  225555555

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}

Probab=99.83  E-value=1.4e-20  Score=166.28  Aligned_cols=141  Identities=28%  Similarity=0.379  Sum_probs=116.5

Q ss_pred             chHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhccccc
Q 014171          266 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS  345 (429)
Q Consensus       266 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~  345 (429)
                      ...++.+++++|..+|.|++|+|+.+||..++. .+|..++..++..+|..+|.|++|.|+|+||+..+......     
T Consensus        32 ~~~~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~-~~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~~-----  105 (204)
T 3e3r_A           32 GASGIQGLARFFRQLDRDGSRSLDADEFRQGLA-KLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQ-----  105 (204)
T ss_dssp             --------CHHHHHHCTTCCSSBCHHHHHHHHH-TTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCCCH-----
T ss_pred             CchhHHHHHHHHHHHccCCCCCcCHHHHHHHHH-HcCCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHhhcCc-----
Confidence            456778999999999999999999999999995 48999999999999999999999999999999865432211     


Q ss_pred             HHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC-------------CHHHHHHHhCC-CCCCcccHHHHHHHHHhccc
Q 014171          346 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-------------SIDPLLEEADI-DKDGRISLSEFRRLLRTASI  411 (429)
Q Consensus       346 ~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~-------------~~~~~~~~~d~-~~dg~i~~~ef~~~~~~~~~  411 (429)
                       .....+..+|+.+|.|++|+|+.+||+.++...+             ++..++..+|. |+||.|+|+||+.++...+.
T Consensus       106 -~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~dg~Is~~EF~~~~~~~~~  184 (204)
T 3e3r_A          106 -AREAVIAAAFAKLDRSGDGVVTVDDLRGVYSGRAHPKVRSGEWTEDEVLRRFLDNFDSSEKDGQVTLAEFQDYYSGVSA  184 (204)
T ss_dssp             -HHHHHHHHHHHHHCTTCSSEECHHHHHHHCCCTTCHHHHTTSSCHHHHHHHHHHHHSCSSCCSCEEHHHHHHHHHHHHH
T ss_pred             -hHHHHHHHHHHHhCcCCCCeEeHHHHHHHHccccCCccccCCCChHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHcCc
Confidence             1245688999999999999999999999998642             27889999998 99999999999999998875


Q ss_pred             cC
Q 014171          412 SS  413 (429)
Q Consensus       412 ~~  413 (429)
                      ..
T Consensus       185 ~~  186 (204)
T 3e3r_A          185 SM  186 (204)
T ss_dssp             HC
T ss_pred             cC
Confidence            44

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A

Probab=99.82  E-value=4e-20  Score=157.39  Aligned_cols=145  Identities=19%  Similarity=0.163  Sum_probs=117.8

Q ss_pred             HHhhhhccccccCCCCCCcccHHHHHHHHH---hhCCCCccHHHHHHH-----------HHHhcCCCCCcccHHHHHHHH
Q 014171          269 ELADLRDQFDAIDVDKNGSISLEEMRQALA---KDLPWKLKESRVLEI-----------LQAIDCNTDGLVDFSEFVAAT  334 (429)
Q Consensus       269 ~~~~l~~~F~~~D~~~~G~i~~~el~~~l~---~~~~~~~~~~~~~~l-----------~~~~d~~~~g~I~~~eF~~~~  334 (429)
                      ++++++++|..+|.|++|+|+.+||..++.   +.+|..++..++..+           |..+|.|++|.|+|+||+..+
T Consensus         2 ~~~~l~~~F~~~D~d~dG~i~~~E~~~~l~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~   81 (166)
T 3akb_A            2 YERRIAARFTTFDQDGNGHIDRSDFSGAAKAMLAEFGVAARSDRGQALYGGAEALWQGLAGIADRDGDQRITREEFVTGA   81 (166)
T ss_dssp             HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHHTCCTTSHHHHHHHHHHHHHHHHHHHHHCTTSSSCEEHHHHHHTH
T ss_pred             HHHHHHHHHhHHcCCCCCCcCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHH
Confidence            356788999999999999999999999853   346888888877754           799999999999999999876


Q ss_pred             hhhhhhccc-ccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC----CHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          335 LHVHQLEEH-DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       335 ~~~~~~~~~-~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~----~~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                      ......... ........+..+|+.+|+|++|+|+.+||+.++...|    ++..++..+|.|+||.|+|+||+.+|.+.
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~~~~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~  161 (166)
T 3akb_A           82 VKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFGVPEDLARQAAAALDTDGDGKVGETEIVPAFARY  161 (166)
T ss_dssp             HHHHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHTTCCHHHHHHHHHHHCTTCSSBCCHHHHHHHHHHH
T ss_pred             HHHhccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            654322110 0011123488999999999999999999999987665    48899999999999999999999999887


Q ss_pred             cccC
Q 014171          410 SISS  413 (429)
Q Consensus       410 ~~~~  413 (429)
                      ..++
T Consensus       162 ~~~~  165 (166)
T 3akb_A          162 FTVP  165 (166)
T ss_dssp             TSCC
T ss_pred             hcCC
Confidence            6654

>1wdc_B Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Y 1kqm_B* 1kwo_B* 1l2o_B* 1qvi_Y* 1s5g_Y* 1sr6_B 1b7t_Y 3jtd_B 3jvt_B 1scm_B 1kk8_B* 1dfk_Y 1dfl_Y* 2w4t_Y 2w4v_Y 2w4w_Y 2otg_B* 2os8_B* 3pn7_B ...

Probab=99.82  E-value=2.7e-20  Score=157.13  Aligned_cols=139  Identities=19%  Similarity=0.362  Sum_probs=116.8

Q ss_pred             hhcccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhh
Q 014171          261 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL  340 (429)
Q Consensus       261 ~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~  340 (429)
                      +...++++++.+++++|..+|.|++|+|+.+||..+|.. +|..++..++..++.    +++|.|+|+||+..+......
T Consensus         8 ~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~   82 (156)
T 1wdc_B            8 VLTKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQ-LGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSG   82 (156)
T ss_dssp             ----CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHHH-HSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCS
T ss_pred             hhccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHH----hCCCcCcHHHHHHHHHHHhcC
Confidence            345668889999999999999999999999999999955 799999999998885    478999999999877643221


Q ss_pred             cccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          341 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       341 ~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                        ...   ...+..+|+.+|+|++|+|+.+||+.++...|.      ++.++..+|.| ||.|+|+||+.+|.+..
T Consensus        83 --~~~---~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~-dg~i~~~eF~~~~~~~~  152 (156)
T 1wdc_B           83 --TDS---EETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKGSG  152 (156)
T ss_dssp             --CCC---HHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHTSC
T ss_pred             --CCh---HHHHHHHHHHHCcCCCCccCHHHHHHHHHHhCCCCCHHHHHHHHHhcCCC-CCEEeHHHHHHHHhcCc
Confidence              111   246889999999999999999999999987763      89999999999 99999999999998653

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*

Probab=99.82  E-value=2.6e-20  Score=156.81  Aligned_cols=140  Identities=30%  Similarity=0.531  Sum_probs=115.4

Q ss_pred             chHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhccccc
Q 014171          266 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS  345 (429)
Q Consensus       266 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~  345 (429)
                      +++++++++++|..+|.|++|+|+.+|| .++.. ++..+   ++..++..+|.+++|.|+|+||+..+........   
T Consensus         1 s~~~~~~l~~~F~~~D~d~~G~i~~~el-~~l~~-~~~~~---~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~---   72 (155)
T 3ll8_B            1 DADEIKRLGKRFKKLDLDNSGSLSVEEF-MSLPE-LQQNP---LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGD---   72 (155)
T ss_dssp             CCHHHHHHHHHHHHHCTTCSSSBCHHHH-TTSGG-GTTCT---THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCC---
T ss_pred             CHHHHHHHHHHHHHhCcCCCCeEcHHHH-HHhhc-cccch---HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCC---
Confidence            3578899999999999999999999999 56633 55443   7899999999999999999999987764322211   


Q ss_pred             HHHHHHHHHHhccccCCCCCccCHHHHHhhhcC-CC------CHHHHHHH----hCCCCCCcccHHHHHHHHHhccccCC
Q 014171          346 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL-KG------SIDPLLEE----ADIDKDGRISLSEFRRLLRTASISSR  414 (429)
Q Consensus       346 ~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~-~~------~~~~~~~~----~d~~~dg~i~~~ef~~~~~~~~~~~~  414 (429)
                        ....++.+|+.+|+|++|+|+.+||+.++.. .+      ++..++..    +|.|+||.|+|+||+.++++......
T Consensus        73 --~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~~~~  150 (155)
T 3ll8_B           73 --KEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHKK  150 (155)
T ss_dssp             --HHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHCTTSSSSBCHHHHHHHHGGGCGGGG
T ss_pred             --HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHhccCchhe
Confidence              1346889999999999999999999999877 34      26666666    99999999999999999999887664


Q ss_pred             C
Q 014171          415 N  415 (429)
Q Consensus       415 ~  415 (429)
                      +
T Consensus       151 ~  151 (155)
T 3ll8_B          151 M  151 (155)
T ss_dssp             C
T ss_pred             e
Confidence            4

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A

Probab=99.81  E-value=4.2e-20  Score=151.22  Aligned_cols=130  Identities=25%  Similarity=0.367  Sum_probs=112.2

Q ss_pred             hhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHH
Q 014171          273 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS  352 (429)
Q Consensus       273 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l  352 (429)
                      ++++|..+|.|++|+|+.+||..++.. +|..++..++..+|+.+|.+++|.|+++||+..+.......   .......+
T Consensus         2 l~~~F~~~D~~~~g~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~---~~~~~~~~   77 (134)
T 1jfj_A            2 AEALFKEIDVNGDGAVSYEEVKAFVSK-KRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQD---LSDDKIGL   77 (134)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHT-TCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCS---SHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHH-cCCCCCHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccc---cCCCHHHH
Confidence            567899999999999999999999954 88899999999999999999999999999998663211111   11112348


Q ss_pred             HHHhccccCCCCCccCHHHHHhhhcCCCC--HHHHHHHhCCCCCCcccHHHHHHHH
Q 014171          353 QAAFEKFDIDRDGFITPEELRMHTGLKGS--IDPLLEEADIDKDGRISLSEFRRLL  406 (429)
Q Consensus       353 ~~~F~~~D~~~~G~I~~~el~~~~~~~~~--~~~~~~~~d~~~dg~i~~~ef~~~~  406 (429)
                      ..+|+.+|+|++|+|+.+||+.++...+.  +..++..+|.|++|.|+|+||+.++
T Consensus        78 ~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~l  133 (134)
T 1jfj_A           78 KVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKADANGDGYITLEEFLEFS  133 (134)
T ss_dssp             HHHHHHHCCSSSSEEEHHHHHHHHTTTTCHHHHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred             HHHHHHHCCCCCCccCHHHHHHHHHHhCHHHHHHHHHHhCCCCCCcEeHHHHHHHh
Confidence            89999999999999999999999999988  8999999999999999999999876

>3dtp_E RLC, myosin regulatory light chain; muscle protein, smooth muscle, myosin subfragment 2, heavy meromyosin, essential light chain; 20.00A {Avicularia avicularia}

Probab=99.81  E-value=2e-20  Score=164.49  Aligned_cols=136  Identities=24%  Similarity=0.337  Sum_probs=118.4

Q ss_pred             cccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcc
Q 014171          263 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE  342 (429)
Q Consensus       263 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~  342 (429)
                      ..+++.++..++++|..+|.|++|+|+.+||..+|. .+|..++..++..++..+    +|.|+|+||+.++....... 
T Consensus        49 ~~ls~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~-~lg~~~~~~~~~~l~~~~----~g~i~~~eF~~~~~~~~~~~-  122 (196)
T 3dtp_E           49 AMFTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFD-SLGRLCTEQELDSMVAEA----PGPINFTMFLTIFGDRIAGT-  122 (196)
T ss_dssp             CSSCTTTHHHHHHHHHHHCCSCSSBCCHHHHHHHHH-TTSCCCCHHHHHHHHTTS----SSCCBHHHHHHHHHHCCCSS-
T ss_pred             hhCCHHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHH-HhCCCCCHHHHHHHHHHc----cCCCcHHHHHHHHHHHhcCC-
Confidence            356788889999999999999999999999999995 589999999999999887    89999999998776432221 


Q ss_pred             cccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       343 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                       ..   ...+..+|+.||.|++|+|+.+||+.++ ..|.      +..++..+|.|+||.|+|+||+.+|++.
T Consensus       123 -~~---~~~l~~~F~~~D~d~~G~Is~~El~~~l-~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~l~~~  190 (196)
T 3dtp_E          123 -DE---EDVIVNAFNLFDEGDGKCKEETLKRSLT-TWGEKFSQDEVDQALSEAPIDGNGLIDIKKFAQILTKG  190 (196)
T ss_dssp             -CC---HHHHHHHHHTTCSSSSCCBHHHHHHHHH-HSSSCCCHHHHHHHHHSSCEETTEECHHHHHHHHHSSC
T ss_pred             -Cc---HHHHHHHHHHHCCCCCCcCcHHHHHHHH-HcCCCCCHHHHHHHHHHcCCCCCCEEeHHHHHHHHHcC
Confidence             11   2468889999999999999999999999 7773      8999999999999999999999999864

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8

Probab=99.81  E-value=1.2e-19  Score=158.66  Aligned_cols=126  Identities=25%  Similarity=0.375  Sum_probs=113.8

Q ss_pred             HhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHH
Q 014171          270 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWH  349 (429)
Q Consensus       270 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~  349 (429)
                      .++++++|..+|.|++|.|+.+||..++ ..+|..++..++..++..+|.|++|.|+|+||+..+...            
T Consensus        26 ~~~l~~~F~~~D~d~~G~I~~~El~~~l-~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~------------   92 (191)
T 1y1x_A           26 NQELMEWFRAVDTDGSGAISVPELNAAL-SSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFI------------   92 (191)
T ss_dssp             TSCHHHHHHHHCTTCSSSBCHHHHHHHH-CBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH------------
T ss_pred             HHHHHHHHHHHcCCCCCcCcHHHHHHHH-HHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH------------
Confidence            3578899999999999999999999999 557888899999999999999999999999999876432            


Q ss_pred             HHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          350 LRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       350 ~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                      ..++.+|+.+|+|++|+|+.+||+.++...|.      +..++..+|.|+||.|+|+||+.++..
T Consensus        93 ~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  157 (191)
T 1y1x_A           93 LSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSIF  157 (191)
T ss_dssp             HHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            35778999999999999999999999988773      889999999999999999999999874

>1ggw_A Protein (CDC4P); light chain, cytokinesis, cell cycle, EF-hand; NMR {Schizosaccharomyces pombe} SCOP: a.39.1.5

Probab=99.81  E-value=3.5e-20  Score=153.39  Aligned_cols=131  Identities=21%  Similarity=0.297  Sum_probs=111.3

Q ss_pred             HHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHH
Q 014171          269 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKW  348 (429)
Q Consensus       269 ~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~  348 (429)
                      ++++++++|..+|.|++|+|+.+||..++.. +|..++..++..++.    +++|.|+|+||+..+...........   
T Consensus         3 ~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~----~~~g~i~~~eF~~~~~~~~~~~~~~~---   74 (140)
T 1ggw_A            3 DDSPYKQAFSLFDRHGTGRIPKTSIGDLLRA-CGQNPTLAEITEIES----TLPAEVDMEQFLQVLNRPNGFDMPGD---   74 (140)
T ss_dssp             CCTTTHHHHHHTCSSSSSEECHHHHHHHHHH-TSCCCCHHHHHHHHT----TSCSSEEHHHHHHHHCTTSSSSSSCC---
T ss_pred             hHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH-cCCCCCHHHHHHHHh----CCCCcCcHHHHHHHHHHHhcccCccc---
Confidence            3467889999999999999999999999954 899999999998887    88999999999987765433222111   


Q ss_pred             HHHHHHHhccccCCCCCccCHHHHHhhhcCCC------CHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          349 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       349 ~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~------~~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                      ...+..+|+.+|+|++|+|+.+||+.++...|      +++.++..+|. +||.|+|+||+.+|.+
T Consensus        75 ~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~-~dg~i~~~eF~~~~~~  139 (140)
T 1ggw_A           75 PEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPV-KDGMVNYHDFVQMILA  139 (140)
T ss_dssp             HHHHHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTC-SSCCSTTTHHHHHHHC
T ss_pred             HHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCCCHHHHHHHHHhccC-CCCcEeHHHHHHHHhc
Confidence            24688999999999999999999999987665      38999999999 9999999999999874

>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=99.81  E-value=4e-20  Score=153.77  Aligned_cols=128  Identities=23%  Similarity=0.329  Sum_probs=111.4

Q ss_pred             hhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHH
Q 014171          273 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS  352 (429)
Q Consensus       273 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l  352 (429)
                      ++++|..+|.|++|.|+.+||..++.. +|..++..++..++..   +++|.|+|+||+..+..... ..   ......+
T Consensus         7 l~~~F~~~D~d~~G~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~---~~~g~i~~~eF~~~~~~~~~-~~---~~~~~~l   78 (145)
T 2bl0_B            7 IQECFQIFDKDNDGKVSIEELGSALRS-LGKNPTNAELNTIKGQ---LNAKEFDLATFKTVYRKPIK-TP---TEQSKEM   78 (145)
T ss_dssp             HHHHHHHHCTTCSSCEEGGGHHHHHHH-TTCCCCHHHHHHHHHH---HTSSEECHHHHHHHHTSCCC-CG---GGGHHHH
T ss_pred             HHHHHHHhCCCCcCccCHHHHHHHHHH-hCCCCCHHHHHHHHHh---cCCCeEcHHHHHHHHHHHhh-cC---cccHHHH
Confidence            888999999999999999999999955 8999999999999988   78999999999987754320 11   1113568


Q ss_pred             HHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          353 QAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       353 ~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                      +.+|+.+|+|++|+|+.+||+.++...|.      ++.++..+|.|+||.|+|+||+.++.+
T Consensus        79 ~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  140 (145)
T 2bl0_B           79 LDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESFVDMLVT  140 (145)
T ss_dssp             HHHHHHHCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCeEcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHHHh
Confidence            89999999999999999999999987773      889999999999999999999999985

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A

Probab=99.80  E-value=1.1e-19  Score=156.03  Aligned_cols=127  Identities=27%  Similarity=0.350  Sum_probs=112.4

Q ss_pred             HHhhhhccccccCCCCCCcccHHHHHHHHHhhCC-CCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHH
Q 014171          269 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP-WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEK  347 (429)
Q Consensus       269 ~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~-~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~  347 (429)
                      +.++++++|..+|.|++|+|+.+||..++. .+| ..++..++..++..+|.|++|.|+|+||+..+...          
T Consensus         5 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~-~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~ef~~~~~~~----------   73 (172)
T 2znd_A            5 DQSFLWNVFQRVDKDRSGVISDTELQQALS-NGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYI----------   73 (172)
T ss_dssp             -CHHHHHHHHHHCTTCSSCEEHHHHHHHCC-CSSSSCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHHHH----------
T ss_pred             chhHHHHHHHHhCCCCCCcCcHHHHHHHHH-hcCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH----------
Confidence            456788999999999999999999999994 466 67899999999999999999999999999865422          


Q ss_pred             HHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          348 WHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       348 ~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                        ..++.+|+.+|+|++|+|+.+||+.++...|.      +..++..+|.|+||.|+|+||+.++..
T Consensus        74 --~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  138 (172)
T 2znd_A           74 --TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIV  138 (172)
T ss_dssp             --HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             --HHHHHHHHHHCCCCCCccCHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence              35778999999999999999999999987763      889999999999999999999988764

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A

Probab=99.80  E-value=4.6e-21  Score=181.31  Aligned_cols=197  Identities=22%  Similarity=0.303  Sum_probs=144.6

Q ss_pred             CCCHHHHHHHHHhc---cCCccCcCCHHHHhCC------CccccCCCCCC-----------------------CCcChHH
Q 014171          193 SISNSAKDFVKKLL---VKDPRARLTAAQALSH------PWVREGGDASE-----------------------IPIDISV  240 (429)
Q Consensus       193 ~~~~~~~~li~~~l---~~dp~~R~s~~e~l~h------~~~~~~~~~~~-----------------------~~~~~~~  240 (429)
                      .++.+..+|..++.   ..+|.+|.+.++.+.|      +|.....+...                       .+.....
T Consensus        16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~a~g~~~~e~q~~~~v   95 (323)
T 1ij5_A           16 KVHENLEELQKKLDHTSFAHKEDRDRLEAQIAQKEQEQKAKLAEYDQKVQNEFDARERAEREREAARGDAAAEKQRLASL   95 (323)
T ss_dssp             HHHHHHHHHHHHHTTCCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhhhHHHHHHHHhhcCCCCCcchhhHHH
Confidence            35677888888888   8999999999988888      88776522110                       0001122


Q ss_pred             HHhhH-HhhhhhHHHHHHHHhhhcccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcC
Q 014171          241 LNNMR-QFVKYSRLKQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDC  319 (429)
Q Consensus       241 l~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~  319 (429)
                      +.+|+ +|...+.+++     +...++++++..+..+|..+|.|++|+|+.+||..+|.. +|..++..++..++..+|.
T Consensus        96 l~~l~~~f~~~~~lkk-----~~~~Ls~~e~~~l~~~F~~~D~d~dG~Is~~El~~~L~~-lg~~~~~~~i~~l~~~~D~  169 (323)
T 1ij5_A           96 LKDLEDDASGYNRLRP-----SKPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAK-YADTIPEGPLKKLFVMVEN  169 (323)
T ss_dssp             HHHC------------------CCCCCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHH-HHTTSCSSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhhhHHH-----HHHhCCHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHH-cCCCCCHHHHHHHHHHhcC
Confidence            33333 3434444444     346788999999999999999999999999999999955 7888899999999999999


Q ss_pred             CCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC------CHHH-HHHHhCCC
Q 014171          320 NTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDP-LLEEADID  392 (429)
Q Consensus       320 ~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~------~~~~-~~~~~d~~  392 (429)
                      +++|.|+|.+|+..+.            ....+..+|+.+|.|++|+|+.+||..++  .|      ++.. ++..+|.|
T Consensus       170 d~~G~I~f~ef~~l~~------------~~~~l~~~F~~~D~d~dG~Is~~El~~~l--~g~~~~~~ei~~~l~~~~D~d  235 (323)
T 1ij5_A          170 DTKGRMSYITLVAVAN------------DLAALVADFRKIDTNSNGTLSRKEFREHF--VRLGFDKKSVQDALFRYADED  235 (323)
T ss_dssp             CCSSTHHHHHHTTSHH------------HHHTSCCCHHHHCTTCCSEECHHHHHHHH--HHTTCCCHHHHHHHHHHHCTT
T ss_pred             CCCCcCcHHHHHhhhh------------HHHHHHHHHHHHCCCCCCcCcHHHHHHHH--cCCCCCHHHHHHHHHHHhcCC
Confidence            9999999999985431            12345668999999999999999999988  33      2788 99999999


Q ss_pred             CCCcccHHHHHHHHHhc
Q 014171          393 KDGRISLSEFRRLLRTA  409 (429)
Q Consensus       393 ~dg~i~~~ef~~~~~~~  409 (429)
                      +||.|+|+||+.++...
T Consensus       236 ~dG~Is~~EF~~~l~~~  252 (323)
T 1ij5_A          236 ESDDVGFSEYVHLGLCL  252 (323)
T ss_dssp             CSSCEEHHHHHHHHHHH
T ss_pred             CCCEEeHHHHHHHHHHH
Confidence            99999999999887653

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A

Probab=99.79  E-value=1.4e-19  Score=175.77  Aligned_cols=140  Identities=28%  Similarity=0.554  Sum_probs=120.6

Q ss_pred             cccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcc
Q 014171          263 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE  342 (429)
Q Consensus       263 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~  342 (429)
                      ..++++++++++++|+.+|.|++|.|+.+||..+|.. ++..++..+++.+++.+|.|++|.|+|+||+..+........
T Consensus       304 ~~ls~eei~el~~~F~~fD~D~dG~Is~~EL~~~L~~-lg~~~s~eel~~Lf~~~D~DgdG~IsfeEFl~ll~~~~~~~~  382 (450)
T 3sg6_A          304 DQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS-LGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTD  382 (450)
T ss_dssp             -CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH-TTCCCCHHHHHHHHHTTCTTSSSSEEHHHHHHHHHC------
T ss_pred             ccCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHhccCCCCcccHHHHHHHHHhhccccc
Confidence            3557788899999999999999999999999999954 899999999999999999999999999999987764432211


Q ss_pred             cccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       343 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                        .   .+.++.+|+.+|+|++|+|+.+||+.++...+.      ++.++..+|.|+||.|+|+||+.+|..
T Consensus       383 --~---~e~l~~aFk~fD~D~dG~Is~eELr~~L~~lG~~ls~eei~~Lf~~~D~D~DG~IsfdEFv~~L~~  449 (450)
T 3sg6_A          383 --S---EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA  449 (450)
T ss_dssp             --C---HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTSSSSEEHHHHHHHHC-
T ss_pred             --h---hhHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence              1   245788999999999999999999999987763      889999999999999999999999864

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A

Probab=99.79  E-value=1.5e-19  Score=155.46  Aligned_cols=126  Identities=22%  Similarity=0.336  Sum_probs=111.4

Q ss_pred             HHhhhhccccccCCCCCCcccHHHHHHHHHhhCC-------CCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhc
Q 014171          269 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP-------WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE  341 (429)
Q Consensus       269 ~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~-------~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~  341 (429)
                      ++++++++|..+| |++|+|+.+||..++...+|       ..++..++..++..+|.|++|.|+|+||+..+...    
T Consensus         2 ~~~~l~~~F~~~D-d~~G~i~~~el~~~l~~~~g~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~----   76 (173)
T 1alv_A            2 EVRQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNI----   76 (173)
T ss_dssp             HHHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH----
T ss_pred             chhHHHHHHHHHh-CCCCCcCHHHHHHHHHHhhhcccccccCCCCHHHHHHHHHHHcCCCCCccCHHHHHHHHHHH----
Confidence            5678999999999 99999999999999966435       67889999999999999999999999999876532    


Q ss_pred             ccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          342 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       342 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                              ..++.+|+.+|+|++|+|+.+||+.++...|.      ++.++..+| |++|.|+|+||+.++..
T Consensus        77 --------~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dg~i~~~eF~~~~~~  140 (173)
T 1alv_A           77 --------KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYS-DEGGNMDFDNFISCLVR  140 (173)
T ss_dssp             --------HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHHHT-CSSSCBCHHHHHHHHHH
T ss_pred             --------HHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCCCCHHHHHHHHHHhc-CCCCcCcHHHHHHHHHH
Confidence                    35778999999999999999999999977663      788999999 99999999999988764

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A

Probab=99.79  E-value=4.5e-19  Score=159.72  Aligned_cols=138  Identities=21%  Similarity=0.343  Sum_probs=118.1

Q ss_pred             ccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhccc
Q 014171          264 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH  343 (429)
Q Consensus       264 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~  343 (429)
                      .++++++..+++.|..  .+++|.|+.+||..++....+...+...++.+|+.+|.|++|.|+|+||+.++........ 
T Consensus        60 ~~s~~ei~~l~~~F~~--~d~~G~Is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~d~~G~I~~~Ef~~~l~~~~~~~~-  136 (229)
T 3dd4_A           60 KFTKKELQILYRGFKN--ECPSGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTV-  136 (229)
T ss_dssp             HHHHHHHHHHHHHHHT--TCCSCCCCHHHHHHHHHHHSCSSSHHHHHHHHHHTTCSSCCSSCCHHHHHHHHHHHHHSCH-
T ss_pred             CCCHHHHHHHHHHHHh--hCCCCCcCHHHHHHHHHHHCCCCCcHHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHcCCCh-
Confidence            4577888888888876  5688999999999999776777888889999999999999999999999988765543221 


Q ss_pred             ccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCC------------------CCHHHHHHHhCCCCCCcccHHHHHHH
Q 014171          344 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK------------------GSIDPLLEEADIDKDGRISLSEFRRL  405 (429)
Q Consensus       344 ~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~------------------~~~~~~~~~~d~~~dg~i~~~ef~~~  405 (429)
                           ...++.+|+.||+|++|+|+.+||..++...                  ..++.+|..+|.|+||.|+|+||+.+
T Consensus       137 -----~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~  211 (229)
T 3dd4_A          137 -----QEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVVTIDEFIES  211 (229)
T ss_dssp             -----HHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC-----------CCTHHHHHHHHHCSSCSSBCCHHHHHHH
T ss_pred             -----HHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcchhhHHHHHHHHHHHhcCCCCCcEeHHHHHHH
Confidence                 3468899999999999999999999988753                  23899999999999999999999999


Q ss_pred             HHhc
Q 014171          406 LRTA  409 (429)
Q Consensus       406 ~~~~  409 (429)
                      +++.
T Consensus       212 ~~~~  215 (229)
T 3dd4_A          212 CQKD  215 (229)
T ss_dssp             HHTC
T ss_pred             HHhC
Confidence            9853

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5

Probab=99.78  E-value=2.6e-19  Score=158.26  Aligned_cols=134  Identities=25%  Similarity=0.320  Sum_probs=114.0

Q ss_pred             HHHhhhhccccccCCC-CCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccH
Q 014171          268 EELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE  346 (429)
Q Consensus       268 ~~~~~l~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~  346 (429)
                      -+.++++++|..+|.+ ++|+|+.+||..++.. +|...+..++..+|..+|.|++|.|+|+||+.++........    
T Consensus        19 ~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~----   93 (204)
T 1jba_A           19 ADAAQLQEWYKKFLEECPSGTLFMHEFKRFFKV-PDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTL----   93 (204)
T ss_dssp             HHHHHHHHHHHHHHSSSTTCCEEHHHHHHHHHC-CSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCC----
T ss_pred             CCHHHHHHHHHHHHhhCCCCCcCHHHHHHHHHH-hcCCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHHccCCH----
Confidence            3445677889999999 8999999999999954 787888899999999999999999999999988765432211    


Q ss_pred             HHHHHHHHHhccccCCCCCccCHHHHHhhhcCC--------------------C---CHHHHHHHhCCCCCCcccHHHHH
Q 014171          347 KWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK--------------------G---SIDPLLEEADIDKDGRISLSEFR  403 (429)
Q Consensus       347 ~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~--------------------~---~~~~~~~~~d~~~dg~i~~~ef~  403 (429)
                        ...+..+|+.+|.|++|+|+.+||+.++...                    .   ++..+|..+|.|+||.|+|+||+
T Consensus        94 --~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~  171 (204)
T 1jba_A           94 --EHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFV  171 (204)
T ss_dssp             --THHHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHH
T ss_pred             --HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCccccccccCchhhHHHHHHHHHHHhCCCCCCeEcHHHHH
Confidence              2357889999999999999999999887653                    1   27889999999999999999999


Q ss_pred             HHHHh
Q 014171          404 RLLRT  408 (429)
Q Consensus       404 ~~~~~  408 (429)
                      .++.+
T Consensus       172 ~~~~~  176 (204)
T 1jba_A          172 EGARR  176 (204)
T ss_dssp             HHHTT
T ss_pred             HHHHc
Confidence            99974

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E

Probab=99.78  E-value=5.2e-19  Score=153.33  Aligned_cols=139  Identities=25%  Similarity=0.391  Sum_probs=114.7

Q ss_pred             cccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcc
Q 014171          263 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE  342 (429)
Q Consensus       263 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~  342 (429)
                      ..++++++.++.+.|...  |++|.|+.+||..++....+..++..++..+|..+|.|++|.|+|+||+.++........
T Consensus        13 ~~~s~~~i~~l~~~fd~~--d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~   90 (183)
T 1s6c_A           13 TNFTKRELQVLYRGFKNE--XPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTV   90 (183)
T ss_dssp             SSCCHHHHHHHHHHHHHH--CTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCH
T ss_pred             cCCCHHHHHHHHHHHHHh--CCCCcCCHHHHHHHHHHHcCCCChHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHcCCCH
Confidence            356778877777766654  689999999999999664334478899999999999999999999999988765432211


Q ss_pred             cccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCC----C--------------CHHHHHHHhCCCCCCcccHHHHHH
Q 014171          343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----G--------------SIDPLLEEADIDKDGRISLSEFRR  404 (429)
Q Consensus       343 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~----~--------------~~~~~~~~~d~~~dg~i~~~ef~~  404 (429)
                            ...+..+|+.+|.|++|+|+.+||+.++...    |              ++..+|+.+|.|+||.|+|+||+.
T Consensus        91 ------~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~  164 (183)
T 1s6c_A           91 ------HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLE  164 (183)
T ss_dssp             ------HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHH
T ss_pred             ------HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHhccccCcCccHHHHHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence                  3468899999999999999999999988654    2              278899999999999999999999


Q ss_pred             HHHhc
Q 014171          405 LLRTA  409 (429)
Q Consensus       405 ~~~~~  409 (429)
                      ++.+.
T Consensus       165 ~~~~~  169 (183)
T 1s6c_A          165 SXQED  169 (183)
T ss_dssp             HTTSC
T ss_pred             HHhcC
Confidence            98753

>2hps_A Coelenterazine-binding protein with bound coelent; bioluminescence, southeast collabora structural genomics, secsg, structural genomics, PSI; HET: CTZ; 1.72A {Renilla muelleri} PDB: 2hq8_A

Probab=99.77  E-value=3.8e-20  Score=160.94  Aligned_cols=151  Identities=18%  Similarity=0.239  Sum_probs=122.1

Q ss_pred             hcccchHHHhhhhccccccCCCCCCcccHHHHHHHHHh-----hCCCCccHHHHHHHH---------HHhcCCCCCcccH
Q 014171          262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK-----DLPWKLKESRVLEIL---------QAIDCNTDGLVDF  327 (429)
Q Consensus       262 ~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~-----~~~~~~~~~~~~~l~---------~~~d~~~~g~I~~  327 (429)
                      ...++++++.+++++|..+|.|++|+|+.+||..++..     .+|..++..++..++         ..+|.|++|.|+|
T Consensus         5 ~~~l~~~~~~~l~~~F~~~D~d~dG~i~~~El~~~l~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~f~~~D~d~dg~I~~   84 (186)
T 2hps_A            5 TESERAYHLRKMKTRMQRVDVTGDGFISREDYELIAVRIAKIAKLSAEKAEETRQEFLRVADQLGLAPGVRISVEEAAVN   84 (186)
T ss_dssp             CHHHHHHHHHHHHHHHHTTCTTCSSEEEHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHTCCTTCEEEHHHHHHH
T ss_pred             cccccHHHHHHHHHHhhhcCCCCCCccCHHHHHHHHHHHHHHHHcCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCCcccH
Confidence            34557788899999999999999999999999999954     248888889999884         9999999999999


Q ss_pred             HHHHHHHhhhhhhcccccHHHHHHHHHHh--ccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccH
Q 014171          328 SEFVAATLHVHQLEEHDSEKWHLRSQAAF--EKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISL  399 (429)
Q Consensus       328 ~eF~~~~~~~~~~~~~~~~~~~~~l~~~F--~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~  399 (429)
                      +|  .++........     ....+..+|  +.||+|++|+|+.+||+.++...|.      +..+|..+|.|+||.|+|
T Consensus        85 ~E--~~~~~~~~~~~-----~~~~~~~~f~~~~fD~d~~G~I~~~E~~~~l~~~g~~~~~~~~~~~~~~~D~d~dG~i~~  157 (186)
T 2hps_A           85 AT--DSLLKMKGEEK-----AMAVIQSLIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISR  157 (186)
T ss_dssp             HH--HHHHHCCTHHH-----HHTTHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHCTTCCHHHHHHHHHHHCTTCSSEEEH
T ss_pred             HH--HHHHHhcCChH-----HHHHHHHHHHHHHccCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHcCCCCCcCcH
Confidence            99  33322211111     112344566  7789999999999999999977663      899999999999999999


Q ss_pred             HHHHHHHHhccccCCCCCCC
Q 014171          400 SEFRRLLRTASISSRNVPPS  419 (429)
Q Consensus       400 ~ef~~~~~~~~~~~~~~~~~  419 (429)
                      +||+.++.....+.+++.|+
T Consensus       158 ~ef~~~~~~~~~~~~~~~~~  177 (186)
T 2hps_A          158 DEFLVTVNDFLFGLEETALA  177 (186)
T ss_dssp             HHHHHHHHHHHHCSSCCHHH
T ss_pred             HHHHHHHHHHhcCCCCCCcc
Confidence            99999999988877666543

>2ct9_A Calcium-binding protein P22; EF-hand, metal binding protein; 2.20A {Rattus norvegicus} PDB: 2e30_A

Probab=99.77  E-value=1.2e-19  Score=160.91  Aligned_cols=146  Identities=23%  Similarity=0.427  Sum_probs=117.4

Q ss_pred             cccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcc
Q 014171          263 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE  342 (429)
Q Consensus       263 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~  342 (429)
                      ..++++++.+++++|..+|.|++|+|+.+||..++ . +|..++.   .++++.+|.+++|.|+|+||+..+........
T Consensus        21 ~~ls~~~~~~l~~~F~~~D~d~dG~Is~~El~~~~-~-lg~~~~~---~~l~~~~d~~~~g~i~~~EF~~~~~~~~~~~~   95 (208)
T 2ct9_A           21 TGFSHSQITRLYSRFTSLDKGENGTLSREDFQRIP-E-LAINPLG---DRIINAFFSEGEDQVNFRGFMRTLAHFRPIED   95 (208)
T ss_dssp             HCCCHHHHHHHHHHHHHHCTTCSSEECTGGGGGCH-H-HHTSTTH---HHHHHTTSCTTCSCEEHHHHHHHHHTTSCCC-
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHH-H-cCCCCcH---HHHHHHHcCCCCCcCcHHHHHHHHHhhccccc
Confidence            35688899999999999999999999999999875 3 5666654   56788999999999999999988765432211


Q ss_pred             cc----------cHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCC-CC------HHHH----HHHhCCCCCCcccHHH
Q 014171          343 HD----------SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK-GS------IDPL----LEEADIDKDGRISLSE  401 (429)
Q Consensus       343 ~~----------~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~-~~------~~~~----~~~~d~~~dg~i~~~e  401 (429)
                      ..          .......++.+|+.+|+|++|+|+.+||+.++... |.      ++.+    +..+|.|+||.|+|+|
T Consensus        96 ~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~s~~~~~~l~~~~~~~~D~d~dG~Is~~E  175 (208)
T 2ct9_A           96 NEKSKDVNGPEPLNSRSNKLHFAFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTE  175 (208)
T ss_dssp             ----------CCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHSCTTCCHHHHHHHHHHHHHHHCSSSSSSEEHHH
T ss_pred             hhhhcccccccccccHHHHHHHHHHHHCCCCCCEEcHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHH
Confidence            10          00124578899999999999999999999999864 52      4444    9999999999999999


Q ss_pred             HHHHHHhccccC
Q 014171          402 FRRLLRTASISS  413 (429)
Q Consensus       402 f~~~~~~~~~~~  413 (429)
                      |+.++.+.....
T Consensus       176 F~~~~~~~~~~~  187 (208)
T 2ct9_A          176 FVKVLEKVDVEQ  187 (208)
T ss_dssp             HHHTTTTSCGGG
T ss_pred             HHHHHhccChHH
Confidence            999998766544

>2qac_A Myosin A tail domain interacting protein MTIP; malaria invasion, structural genomics, PSI, protein structur initiative, structural genomics of pathogenic protozoa CONS SGPP; 1.70A {Plasmodium falciparum} PDB: 2auc_A

Probab=99.77  E-value=3.2e-19  Score=148.68  Aligned_cols=130  Identities=16%  Similarity=0.140  Sum_probs=111.9

Q ss_pred             chHHHhhhhccccccCCCC-CCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccc
Q 014171          266 DDEELADLRDQFDAIDVDK-NGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD  344 (429)
Q Consensus       266 ~~~~~~~l~~~F~~~D~~~-~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~  344 (429)
                      ..+++.+++++|..+|.|+ +|+|+.+||..++.. +|..++..++..++..+|.+    |+|+||+..+......  ..
T Consensus         9 ~~~~~~~l~~~F~~~D~d~~~G~i~~~el~~~l~~-~g~~~~~~~~~~l~~~~d~~----i~~~eF~~~~~~~~~~--~~   81 (146)
T 2qac_A            9 QLEEKVDESDVRIYFNEKSSGGKISIDNASYNARK-LGLAPSSIDEKKIKELYGDN----LTYEQYLEYLSICVHD--KD   81 (146)
T ss_dssp             HHHHHSCHHHHHHHHHHHCBTTBEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHCSE----ECHHHHHHHHHHTCCT--TC
T ss_pred             HHHHHHHHHHHHHHhCccCCCCcccHHHHHHHHHH-hCCCCCHHHHHHHHHHhCCC----CCHHHHHHHHHHHhcC--cc
Confidence            3456778999999999999 999999999999954 89999999999999999987    9999999877643221  11


Q ss_pred             cHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHH
Q 014171          345 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLR  407 (429)
Q Consensus       345 ~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~  407 (429)
                      .   ...+..+|+.+|+|++|+|+.+||+.++...|.      ++.++..+  |+||.|+|+||+.+|+
T Consensus        82 ~---~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~l~  145 (146)
T 2qac_A           82 N---VEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDALTDQEAIDALNAF--SSEDNIDYKLFCEDIL  145 (146)
T ss_dssp             C---HHHHHHHHHTTCTTCSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHH--CSSSEEEHHHHHHHHT
T ss_pred             h---HHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhCCCCCHHHHHHHHHHc--CCCCcCcHHHHHHHHh
Confidence            1   246889999999999999999999999987763      88899999  9999999999999986

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A

Probab=99.77  E-value=6.4e-19  Score=154.98  Aligned_cols=129  Identities=18%  Similarity=0.309  Sum_probs=112.9

Q ss_pred             cchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCC-----CccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhh
Q 014171          265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW-----KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ  339 (429)
Q Consensus       265 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~-----~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~  339 (429)
                      .++.+++++++ |..+|.|++|+|+.+||..++.. +|.     .++..++..++..+|.|++|.|+|+||+..+...  
T Consensus        27 ~~~~~~~~l~~-F~~~D~d~~G~i~~~el~~~l~~-lg~~~~~~~~~~~~~~~l~~~~D~d~~g~i~~~eF~~~~~~~--  102 (198)
T 1juo_A           27 FPGQTQDPLYG-YFAAVAGQDGQIDADELQRCLTQ-SGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL--  102 (198)
T ss_dssp             CTTCCCCTTHH-HHHHHHTTTTEECHHHHHHHHHH-HTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH--
T ss_pred             CCccccHHHHH-HHHHhCCCCCcCCHHHHHHHHHH-hcccCCCCCCCHHHHHHHHHHhCCCCCCeECHHHHHHHHHHH--
Confidence            45567788999 99999999999999999999955 665     5789999999999999999999999999876532  


Q ss_pred             hcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          340 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       340 ~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                                ..++.+|+.+|+|++|+|+.+||+.++...|.      ++.++..+  |+||.|+|+||+.++...
T Consensus       103 ----------~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~l~~~~--d~dg~i~~~eF~~~~~~~  166 (198)
T 1juo_A          103 ----------NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRY--STNGKITFDDYIACCVKL  166 (198)
T ss_dssp             ----------HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHT--CSSSSEEHHHHHHHHHHH
T ss_pred             ----------HHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHH
Confidence                      35778999999999999999999999987763      88899988  899999999999987643

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A

Probab=99.77  E-value=9.5e-19  Score=157.26  Aligned_cols=140  Identities=27%  Similarity=0.411  Sum_probs=115.5

Q ss_pred             ccchHHHhhhhccccccCCC--CCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhc
Q 014171          264 TLDDEELADLRDQFDAIDVD--KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE  341 (429)
Q Consensus       264 ~~~~~~~~~l~~~F~~~D~~--~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~  341 (429)
                      .++++++.+++++|..+|.|  ++|.|+.+||..+|..  +....+..+.++|..+|.|++|.|+|+||+..+.......
T Consensus        41 ~ls~~ei~~l~~~F~~~D~d~~~~G~I~~~El~~~l~~--~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~  118 (226)
T 2zfd_A           41 VFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK--TNKKESLFADRVFDLFDTKHNGILGFEEFARALSVFHPNA  118 (226)
T ss_dssp             SCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHS--CSSCCCHHHHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTS
T ss_pred             CCCHHHHHHHHHHHHHhCcccCCCCeEcHHHHHHHHhc--cCcccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHccCC
Confidence            57889999999999999999  9999999999999954  3334455778899999999999999999998776543211


Q ss_pred             ccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhc----CCCC----------HHHHHHHhCCCCCCcccHHHHHHHHH
Q 014171          342 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG----LKGS----------IDPLLEEADIDKDGRISLSEFRRLLR  407 (429)
Q Consensus       342 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~----~~~~----------~~~~~~~~d~~~dg~i~~~ef~~~~~  407 (429)
                      .     ....++.+|+.+|.|++|+|+.+||+.++.    ..|.          +..+|..+|.|+||.|+|+||+.++.
T Consensus       119 ~-----~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~EF~~~~~  193 (226)
T 2zfd_A          119 P-----IDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVL  193 (226)
T ss_dssp             C-----HHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHHHH
T ss_pred             C-----HHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            1     134688999999999999999999999884    2331          35566799999999999999999998


Q ss_pred             hcc
Q 014171          408 TAS  410 (429)
Q Consensus       408 ~~~  410 (429)
                      +..
T Consensus       194 ~~~  196 (226)
T 2zfd_A          194 RHP  196 (226)
T ss_dssp             HSG
T ss_pred             hCh
Confidence            653

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}

Probab=99.77  E-value=5.5e-19  Score=154.13  Aligned_cols=132  Identities=20%  Similarity=0.364  Sum_probs=110.4

Q ss_pred             hhhccccccCCC-CCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHH
Q 014171          272 DLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL  350 (429)
Q Consensus       272 ~l~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~  350 (429)
                      +++++|..+|.+ ++|+|+.+||..++....+...+..++..+|..+|.|++|.|+++||+.++......   ..   ..
T Consensus        26 el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~---~~---~~   99 (190)
T 2l2e_A           26 ELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGDPSAFAEYVFNVFDADKNGYIDFKEFICALSVTSRG---EL---ND   99 (190)
T ss_dssp             HHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSCHHHHHHHHHHHHCSSSTTCEEHHHHHHHHTTSSCS---CS---HH
T ss_pred             HHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCCccHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCC---CH---HH
Confidence            356668889999 899999999999997644555677889999999999999999999999877544321   11   24


Q ss_pred             HHHHHhccccCCCCCccCHHHHHhhhcCC------------------CCHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          351 RSQAAFEKFDIDRDGFITPEELRMHTGLK------------------GSIDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       351 ~l~~~F~~~D~~~~G~I~~~el~~~~~~~------------------~~~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                      .+..+|+.+|.|++|+|+.+||+.++...                  .++..+|..+|.|+||.|+|+||+.++...
T Consensus       100 ~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~  176 (190)
T 2l2e_A          100 KLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVGSMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRD  176 (190)
T ss_dssp             HHHHHHHHHCTTSCSCBCHHHHHHHHHHHHHHHHHHSCCCSSCCCTHHHHHHHHHHHTCCSSCCBCHHHHHHHHHTC
T ss_pred             HHHHHHhHccCCCCCcCcHHHHHHHHHHHHHHhccccCcccccccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhC
Confidence            67889999999999999999999887651                  127889999999999999999999999764

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A

Probab=99.77  E-value=1.1e-18  Score=154.51  Aligned_cols=140  Identities=25%  Similarity=0.414  Sum_probs=115.2

Q ss_pred             ccchHHHhhhhccccccCCC--CCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhc
Q 014171          264 TLDDEELADLRDQFDAIDVD--KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE  341 (429)
Q Consensus       264 ~~~~~~~~~l~~~F~~~D~~--~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~  341 (429)
                      .++++++.+++++|..+|.|  ++|.|+.+||..++..  .....+..+.++|..+|.|++|.|+|+||+..+.......
T Consensus        30 ~~s~~~~~~l~~~F~~~D~d~~~~G~i~~~e~~~~l~~--~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~  107 (207)
T 2ehb_A           30 PFTVEEVEALYELFKKLSSSIIDDGLIHKEEFQLALFR--NRNRRNLFADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSA  107 (207)
T ss_dssp             SCCHHHHHHHHHHHHHHTTSSSCSSCEEHHHHHHHHHS--CTTCCCHHHHHHHHHHCTTCSSEECHHHHHHHHGGGSTTS
T ss_pred             CCCHHHHHHHHHHHHHhccccCCCCccCHHHHHHHHhc--cccccHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHccCC
Confidence            57889999999999999999  9999999999999954  3334456788899999999999999999998776542211


Q ss_pred             ccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhc----CCCC----------HHHHHHHhCCCCCCcccHHHHHHHHH
Q 014171          342 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG----LKGS----------IDPLLEEADIDKDGRISLSEFRRLLR  407 (429)
Q Consensus       342 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~----~~~~----------~~~~~~~~d~~~dg~i~~~ef~~~~~  407 (429)
                      .     ....+..+|+.+|.|++|+|+.+||+.++.    ..|.          +..+|..+|.|+||.|+|+||+.++.
T Consensus       108 ~-----~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~  182 (207)
T 2ehb_A          108 P-----VHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDEWKDFVS  182 (207)
T ss_dssp             C-----HHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHH
T ss_pred             C-----HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            1     134688999999999999999999999884    2231          35566799999999999999999998


Q ss_pred             hcc
Q 014171          408 TAS  410 (429)
Q Consensus       408 ~~~  410 (429)
                      +..
T Consensus       183 ~~~  185 (207)
T 2ehb_A          183 LNP  185 (207)
T ss_dssp             HCG
T ss_pred             hCh
Confidence            653

>3a8r_A Putative uncharacterized protein; EF-hand, membrane, oxidoreductase, transmembrane, calcium BI protein; 2.40A {Oryza sativa japonica group}

Probab=99.76  E-value=7.1e-19  Score=152.04  Aligned_cols=139  Identities=14%  Similarity=0.263  Sum_probs=112.1

Q ss_pred             HHhhhcccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhc---CCCCCcccHHHHHHHH
Q 014171          258 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID---CNTDGLVDFSEFVAAT  334 (429)
Q Consensus       258 l~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d---~~~~g~I~~~eF~~~~  334 (429)
                      +.++....+..++.++++.|..+|  ++|+|+.+||..++    |..++...+..++..+|   .+++|.|+|+||+..+
T Consensus        15 l~~~~~~~~~~~~~~~~~~F~~~D--~dG~I~~~el~~~l----g~~~~~~~~~~i~~~~d~~~~~~~~~i~~~ef~~~~   88 (179)
T 3a8r_A           15 LQFVTAKVGNDGWAAVEKRFNQLQ--VDGVLLRSRFGKCI----GMDGSDEFAVQMFDSLARKRGIVKQVLTKDELKDFY   88 (179)
T ss_dssp             HHHHHHHHCCCCHHHHHHHHHHHC--BTTBEEGGGHHHHH----TCCSCHHHHHHHHHHHHHHHTCCSSEECHHHHHHHH
T ss_pred             HHHHHhccchhhHHHHHHHHhccC--CCCCCcHHHHHHHH----CCCCcHHHHHHHHHHHHHhccCCCCCcCHHHHHHHH
Confidence            444444444456778999999999  89999999999865    66778888999999887   5678899999999876


Q ss_pred             hhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhc-CCC-------------CHHHHHHHhCCCCCCcccHH
Q 014171          335 LHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG-LKG-------------SIDPLLEEADIDKDGRISLS  400 (429)
Q Consensus       335 ~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~-~~~-------------~~~~~~~~~d~~~dg~i~~~  400 (429)
                      ....   ...   ....++.+|+.||+|++|+|+.+||+.++. ..|             +++.++..+|.|+||.|+|+
T Consensus        89 ~~~~---~~~---~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~~  162 (179)
T 3a8r_A           89 EQLT---DQG---FDNRLRTFFDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEME  162 (179)
T ss_dssp             HHHH---CCC---HHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHSTTCCSEECHH
T ss_pred             HHHc---CCC---HHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccccccccccchHHHHHHHHHHhCCCCCCcCcHH
Confidence            5332   111   135789999999999999999999999887 332             37889999999999999999


Q ss_pred             HHHHHHHh
Q 014171          401 EFRRLLRT  408 (429)
Q Consensus       401 ef~~~~~~  408 (429)
                      ||+.++..
T Consensus       163 EF~~~~~~  170 (179)
T 3a8r_A          163 DLEALLLQ  170 (179)
T ss_dssp             HHHHHHC-
T ss_pred             HHHHHHHh
Confidence            99999975

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5

Probab=99.76  E-value=1.7e-18  Score=155.34  Aligned_cols=138  Identities=25%  Similarity=0.364  Sum_probs=113.8

Q ss_pred             ccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCC-CCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcc
Q 014171          264 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP-WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE  342 (429)
Q Consensus       264 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~-~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~  342 (429)
                      .++.++++.+.+.|+..  +++|.|+.+||..++.. ++ ...+..++..+|+.+|.|++|.|+|+||+.++........
T Consensus        47 ~~s~~ei~~l~~~Fd~~--d~~G~I~~~E~~~~l~~-l~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~l~~~~~~~~  123 (224)
T 1s1e_A           47 NFTKRELQVLYRGFKNE--CPSGVVNEETFKQIYAQ-FFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTV  123 (224)
T ss_dssp             SCCHHHHHHHHHHHHHH--CTTSCBCHHHHHHHHHT-TCTTSCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHCCH
T ss_pred             CCCHHHHHHHHHHHHhh--CCCCCCCHHHHHHHHHH-hcCCCCcHHHHHHHHHHhcCCCCCcEeHHHHHHHHHHHccCCH
Confidence            46777777776666544  48999999999999965 55 4478899999999999999999999999988765432211


Q ss_pred             cccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCC----C--------------CHHHHHHHhCCCCCCcccHHHHHH
Q 014171          343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----G--------------SIDPLLEEADIDKDGRISLSEFRR  404 (429)
Q Consensus       343 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~----~--------------~~~~~~~~~d~~~dg~i~~~ef~~  404 (429)
                            ...++.+|+.+|.|++|+|+.+||+.++...    |              ++..+|+.+|.|+||.|+|+||+.
T Consensus       124 ------~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~EF~~  197 (224)
T 1s1e_A          124 ------HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLE  197 (224)
T ss_dssp             ------HHHHHHHHHHHCTTCCSEECHHHHHHHHHHHHHHHTTCCCGGGCSSSHHHHHHHHHHHHCTTCSSCEEHHHHHH
T ss_pred             ------HHHHHHHHHHHcCCCCCeECHHHHHHHHHHHHHHhcccCCCCCCHhHHHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence                  3468899999999999999999999987653    2              278899999999999999999999


Q ss_pred             HHHhcc
Q 014171          405 LLRTAS  410 (429)
Q Consensus       405 ~~~~~~  410 (429)
                      ++.+..
T Consensus       198 ~~~~~~  203 (224)
T 1s1e_A          198 SCQEDD  203 (224)
T ss_dssp             HHHTCH
T ss_pred             HHHhCH
Confidence            998643

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}

Probab=99.76  E-value=1.6e-18  Score=148.86  Aligned_cols=114  Identities=16%  Similarity=0.203  Sum_probs=99.8

Q ss_pred             cCCCCCCcccHHHHHHHHHhhC------CCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHH
Q 014171          280 IDVDKNGSISLEEMRQALAKDL------PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQ  353 (429)
Q Consensus       280 ~D~~~~G~i~~~el~~~l~~~~------~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~  353 (429)
                      -+.|++|+|+.+||..+|.. +      |..++..+++.+++.+|.|++|.|+|+||+.++...            ..++
T Consensus        13 ~~~~~dG~I~~~EL~~~l~~-l~~~~~~g~~~~~~~~~~l~~~~D~d~~G~I~f~EF~~~~~~~------------~~l~   79 (174)
T 2i7a_A           13 GLVPRGSDIDATQLQGLLNQ-ELLTGPPGDMFSLDECRSLVALMELKVNGRLDQEEFARLWKRL------------VHYQ   79 (174)
T ss_dssp             CSCC-CCCEEHHHHHHHHHH-HHC-----CCCCHHHHHHHHHHHCSSCSSEECHHHHHHHHHHH------------HHHH
T ss_pred             ccCCCCCcCCHHHHHHHHHH-HHhccCCCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH------------HHHH
Confidence            47899999999999999965 4      678889999999999999999999999999876432            2477


Q ss_pred             HHhccccCCCCCccCHHHHHhhhcCC----CC------HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          354 AAFEKFDIDRDGFITPEELRMHTGLK----GS------IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       354 ~~F~~~D~~~~G~I~~~el~~~~~~~----~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                      .+|+.|| |++|+|+.+||+.++...    |.      ++.++..+| |+||.|+|+||+.++..
T Consensus        80 ~aF~~fD-d~~G~I~~~El~~~l~~l~~~~G~~~~~~~~~~l~~~~d-d~dG~I~~~EF~~~~~~  142 (174)
T 2i7a_A           80 HVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFISRELLHLVTLRYS-DSVGRVSFPSLVCFLMR  142 (174)
T ss_dssp             HHHHHHC-SBTTBEEGGGHHHHHHTCGGGTTCCCCHHHHHHHHHHHS-CTTSEECHHHHHHHHHH
T ss_pred             HHHHHhc-CCCCcCCHHHHHHHHHHhHhccCCCCCHHHHHHHHHHHc-CCCCeEcHHHHHHHHHH
Confidence            8999999 999999999999999988    63      788999999 99999999999988864

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.76  E-value=3.4e-20  Score=187.59  Aligned_cols=118  Identities=18%  Similarity=0.213  Sum_probs=99.6

Q ss_pred             ccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecc
Q 014171           35 LPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG  114 (429)
Q Consensus        35 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg  114 (429)
                      .....|+|||||+||+|.+++..          +..++.|++.||.|||++||+||||||+|||++    . .+||+|||
T Consensus       410 ~~~~~~lVmE~~~ggsL~~~l~~----------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~----~-~~kL~DFG  474 (540)
T 3en9_A          410 DLDNKRIMMSYINGKLAKDVIED----------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFD----K-DLYIIDFG  474 (540)
T ss_dssp             ETTTTEEEEECCCSEEHHHHSTT----------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEES----S-SEEECCCT
T ss_pred             eCCccEEEEECCCCCCHHHHHHH----------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEEC----C-eEEEEECc
Confidence            34456899999999999998833          568999999999999999999999999999998    3 89999999


Q ss_pred             cceeccCCCc--------ccccccCCcccccccccC---CCCCCcchHHHHHHHHHHhhCCCCC
Q 014171          115 LSDFIKPGKK--------FQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPF  167 (429)
Q Consensus       115 ~a~~~~~~~~--------~~~~~g~~~y~aPE~~~~---~~~~~~DiwslG~il~~l~~g~~pf  167 (429)
                      +|+.......        .....||+.|+|||++..   .|+..+|+||..+-..+.+.++.+|
T Consensus       475 la~~~~~~~~~~~~~~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r~rY  538 (540)
T 3en9_A          475 LGKISNLDEDKAVDLIVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERRARY  538 (540)
T ss_dssp             TCEECCCHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTCSCC
T ss_pred             cCEECCCccccccchhhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcccc
Confidence            9988754322        135689999999999964   4577889999999888888877766

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}

Probab=99.76  E-value=1e-18  Score=155.26  Aligned_cols=131  Identities=24%  Similarity=0.341  Sum_probs=106.4

Q ss_pred             hhhhccccccCCC-CCCcccHHHHHHHHHhhCCCCccH-HHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHH
Q 014171          271 ADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKE-SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKW  348 (429)
Q Consensus       271 ~~l~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~~~~~-~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~  348 (429)
                      ++++++|+.+|.+ ++|+|+.+||..++ ..+|..++. .++..+|..+|.|++|.|+|+||+.++.......      .
T Consensus        19 ~ei~~~f~~fD~~~~~G~is~~El~~~l-~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~------~   91 (211)
T 2ggz_A           19 QETHVWYRTFMMEYPSGLQTLHEFKTLL-GLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEK------M   91 (211)
T ss_dssp             -----CCCSHHHHCTTSEEEHHHHHHHT-TCCSCCHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHSCSS------H
T ss_pred             HHHHHHHHHHHHhCCCCcCCHHHHHHHH-HHhCCCcchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhccCc------h
Confidence            4567889999988 89999999999999 457776554 5699999999999999999999998876443211      1


Q ss_pred             HHHHHHHhccccCCCCCccCHHHHHhhhcCCC------------CHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          349 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------------SIDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       349 ~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~------------~~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                      ...++.+|+.+|.|++|+|+.+||+.++...+            .+..+|..+|.|+||.|+|+||+.++.+
T Consensus        92 ~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~  163 (211)
T 2ggz_A           92 EQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDINNDGELTLEEFINGMAK  163 (211)
T ss_dssp             HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSCTHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHT
T ss_pred             HHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCccccHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHh
Confidence            34688999999999999999999999886542            1678999999999999999999999874

>1ij5_A Plasmodial specific LAV1-2 protein; fourty kDa calcium binding protein, CBP40, metal binding protein; 3.00A {Physarum polycephalum} SCOP: a.39.1.9 PDB: 1ij6_A

Probab=99.75  E-value=2.1e-18  Score=163.08  Aligned_cols=130  Identities=23%  Similarity=0.343  Sum_probs=115.8

Q ss_pred             HHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHH-HHHHhcCCCCCcccHHHHHHHHhhhhhhcccccH
Q 014171          268 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLE-ILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE  346 (429)
Q Consensus       268 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~-l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~  346 (429)
                      .....+..+|..+|.|++|+|+.+||..++   +|..++..++.. ++..+|.|++|.|+|+||+..+....        
T Consensus       185 ~~~~~l~~~F~~~D~d~dG~Is~~El~~~l---~g~~~~~~ei~~~l~~~~D~d~dG~Is~~EF~~~l~~~~--------  253 (323)
T 1ij5_A          185 NDLAALVADFRKIDTNSNGTLSRKEFREHF---VRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLL--------  253 (323)
T ss_dssp             HHHHTSCCCHHHHCTTCCSEECHHHHHHHH---HHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH--------
T ss_pred             hHHHHHHHHHHHHCCCCCCcCcHHHHHHHH---cCCCCCHHHHHHHHHHHhcCCCCCEEeHHHHHHHHHHHH--------
Confidence            456789999999999999999999999998   567788899999 99999999999999999998775443        


Q ss_pred             HHHHHHHHHhccccCCCCCccCHHHHHhhh-cCCC------CHHHHHHHhCCCCCCcccHHHHHHHHHhcccc
Q 014171          347 KWHLRSQAAFEKFDIDRDGFITPEELRMHT-GLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTASIS  412 (429)
Q Consensus       347 ~~~~~l~~~F~~~D~~~~G~I~~~el~~~~-~~~~------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~~  412 (429)
                          .+..+|+.||+|++|+|+.+||+.++ ...|      ++..+|..+|.|+||.|+|+||+.+|.+...|
T Consensus       254 ----~l~~~F~~~D~d~dG~Is~~El~~~l~~~~g~~ls~~e~~~l~~~~D~d~dG~Is~~EF~~~~~~~~~S  322 (323)
T 1ij5_A          254 ----VLRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVLLMFHD  322 (323)
T ss_dssp             ----HHHHHHHHTCSSSCSSEEHHHHHHHHHHTTCCGGGCSTHHHHHHHHTTTTCSEECHHHHHHHHHHHC--
T ss_pred             ----HHHHHHHHhCCCCCCCccHHHHHHHHHHHcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHhcCC
Confidence                36779999999999999999999999 7766      48999999999999999999999999887654

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}

Probab=99.75  E-value=8.9e-19  Score=154.00  Aligned_cols=132  Identities=23%  Similarity=0.348  Sum_probs=110.5

Q ss_pred             HhhhhccccccCCC-CCCcccHHHHHHHHHhhCCCCccH-HHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHH
Q 014171          270 LADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKE-SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEK  347 (429)
Q Consensus       270 ~~~l~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~~~~~-~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~  347 (429)
                      .++++++|..+|.+ ++|+|+.+||..++ +.+|..++. .++..+|..+|.|++|.|+|+||+.++.......   .  
T Consensus        13 ~~el~~~f~~fd~~~~~G~i~~~e~~~~l-~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~~~~~~---~--   86 (198)
T 2r2i_A           13 ATECHQWYKKFMTECPSGQLTLYEFKQFF-GLKNLSPSANKYVEQMFETFDFNKDGYIDFMEYVAALSLVLKGK---V--   86 (198)
T ss_dssp             TSCHHHHHHHHHHHCTTSEECHHHHHHHH-TCCSCCHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHSSCC---H--
T ss_pred             HHHHHHHHHHHHHhCCCCcCCHHHHHHHH-HHhCCCcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHccCc---h--
Confidence            34567789999988 89999999999999 557777665 4599999999999999999999998776543211   1  


Q ss_pred             HHHHHHHHhccccCCCCCccCHHHHHhhhcCCC------------C-HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          348 WHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------------S-IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       348 ~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~------------~-~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                       ...++.+|+.+|.|++|+|+.+||+.++...+            + +..+|..+|.|+||.|+|+||+.++.+
T Consensus        87 -~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~  159 (198)
T 2r2i_A           87 -DQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEFMEGVQK  159 (198)
T ss_dssp             -HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHTTGGGGSSSCCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHTT
T ss_pred             -HHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCCchhhHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHc
Confidence             34688899999999999999999999887553            1 778999999999999999999999874

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8

Probab=99.75  E-value=4.1e-18  Score=145.50  Aligned_cols=119  Identities=18%  Similarity=0.309  Sum_probs=105.1

Q ss_pred             ccccccCCCCCCcccHHHHHHHHHhhCCC-----CccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHH
Q 014171          275 DQFDAIDVDKNGSISLEEMRQALAKDLPW-----KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWH  349 (429)
Q Consensus       275 ~~F~~~D~~~~G~i~~~el~~~l~~~~~~-----~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~  349 (429)
                      +.|..+|.|++|+|+.+||..++.. +|.     .++..++..++..+|.|++|.|+|+||+..+...            
T Consensus         5 ~~F~~~D~d~~G~i~~~el~~~l~~-lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------------   71 (167)
T 1gjy_A            5 YGYFASVAGQDGQIDADELQRCLTQ-SGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL------------   71 (167)
T ss_dssp             HHHHHHHCCTTSCBCHHHHHHHHHH-HTCSTTSCCCCHHHHHHHHHHHCTTCCSCBCHHHHHHHHHHH------------
T ss_pred             HHHHHHHcCCCCcCCHHHHHHHHHh-hcccCCCCCcCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH------------
Confidence            3488999999999999999999955 665     6789999999999999999999999999876432            


Q ss_pred             HHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          350 LRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       350 ~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                      ..++.+|+.+|+|++|+|+.+||+.++...|.      ++.++..+  |++|.|+|+||+.++..
T Consensus        72 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~  134 (167)
T 1gjy_A           72 NGWRQHFISFDSDRSGTVDPQELQKALTTMGFRLNPQTVNSIAKRY--STSGKITFDDYIACCVK  134 (167)
T ss_dssp             HHHHHHHHHHCTTCCSEECHHHHHHHHHTTTCCCCHHHHHHHHHHT--CBTTBEEHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCCCHHHHHHHHHHh--CcCCcCcHHHHHHHHHH
Confidence            34778999999999999999999999988873      78899988  89999999999998864

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*

Probab=99.75  E-value=1.3e-18  Score=150.81  Aligned_cols=136  Identities=24%  Similarity=0.378  Sum_probs=113.3

Q ss_pred             ccchHHHhhhhccccccCC-----CC-C--CcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCc-ccHHHHHHHH
Q 014171          264 TLDDEELADLRDQFDAIDV-----DK-N--GSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL-VDFSEFVAAT  334 (429)
Q Consensus       264 ~~~~~~~~~l~~~F~~~D~-----~~-~--G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~-I~~~eF~~~~  334 (429)
                      .+++.++..+++.|..+|.     |+ +  |.|+.+||.. + ..+|..++..   +++..+|.+++|. |+|+||+..+
T Consensus        13 ~ls~~~~~~l~~~F~~~D~~~~~~~~~~~~G~i~~~el~~-l-~~~g~~~~~~---~l~~~~D~d~~G~~I~~~EF~~~~   87 (183)
T 1dgu_A           13 FLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-L-PELKANPFKE---RICRVFSTSPAKDSLSFEDFLDLL   87 (183)
T ss_dssp             SCCHHHHHHHHHHHHHHSCSTTCSSCCCTTTCSCHHHHHT-S-TTSSSCTTHH---HHHHHHSCSSSSCCCCHHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHhCccccccccccccCcCcHHHHHH-H-HhhhcCcHHH---HHHHHhCCCCCCCEecHHHHHHHH
Confidence            5688899999999999999     68 8  9999999999 7 5588887764   5788889999999 9999999887


Q ss_pred             hhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC-----------HH----HHHHHhCCCCCCcccH
Q 014171          335 LHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS-----------ID----PLLEEADIDKDGRISL  399 (429)
Q Consensus       335 ~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~-----------~~----~~~~~~d~~~dg~i~~  399 (429)
                      ........   .  ...++.+|+.||+|++|+|+.+||+.++...+.           +.    .++..+|.|+||.|+|
T Consensus        88 ~~~~~~~~---~--~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~I~~  162 (183)
T 1dgu_A           88 SVFSDTAT---P--DIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINL  162 (183)
T ss_dssp             HHHSTTCC---H--HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHHHHHHHHHHHCTTSSSEEEH
T ss_pred             HHhcCCCC---H--HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHHHHHHHHHHhCCCCCCeEcH
Confidence            65432211   1  246889999999999999999999998875532           33    4899999999999999


Q ss_pred             HHHHHHHHhc
Q 014171          400 SEFRRLLRTA  409 (429)
Q Consensus       400 ~ef~~~~~~~  409 (429)
                      +||+.++.+.
T Consensus       163 ~EF~~~~~~~  172 (183)
T 1dgu_A          163 SEFQHVISRS  172 (183)
T ss_dssp             HHHHHHHCSS
T ss_pred             HHHHHHHHhC
Confidence            9999999753

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A

Probab=99.74  E-value=2.1e-18  Score=150.36  Aligned_cols=137  Identities=22%  Similarity=0.383  Sum_probs=111.6

Q ss_pred             ccchHHHhhhhccccccCCC-CCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcc
Q 014171          264 TLDDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE  342 (429)
Q Consensus       264 ~~~~~~~~~l~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~  342 (429)
                      .++.++   +.++|+.+|.+ ++|+|+.+||..++....+...+...+..+|..+|.|++|.|+++||+.++........
T Consensus        21 ~~~~~~---i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~   97 (190)
T 1g8i_A           21 YFTEKE---VQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTL   97 (190)
T ss_dssp             SSCHHH---HHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCH
T ss_pred             CCCHHH---HHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCChHHHHHHHHHHHhcCCCCeEeHHHHHHHHHHhcCCCH
Confidence            445555   45557777776 89999999999999765454566788999999999999999999999987765432211


Q ss_pred             cccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCC----C--------------CHHHHHHHhCCCCCCcccHHHHHH
Q 014171          343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----G--------------SIDPLLEEADIDKDGRISLSEFRR  404 (429)
Q Consensus       343 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~----~--------------~~~~~~~~~d~~~dg~i~~~ef~~  404 (429)
                            ...+..+|+.+|.|++|+|+.+||+.++...    |              ++..+|..+|.|+||.|+|+||+.
T Consensus        98 ------~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~ef~~  171 (190)
T 1g8i_A           98 ------DEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQE  171 (190)
T ss_dssp             ------HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHH
T ss_pred             ------HHHHHHHHHhhcCCCCCeECHHHHHHHHHHHHHHhCCccCCccccccHHHHHHHHHHHhcCCCCCcEeHHHHHH
Confidence                  3467889999999999999999999988661    1              278899999999999999999999


Q ss_pred             HHHhc
Q 014171          405 LLRTA  409 (429)
Q Consensus       405 ~~~~~  409 (429)
                      ++.+.
T Consensus       172 ~~~~~  176 (190)
T 1g8i_A          172 GSKAD  176 (190)
T ss_dssp             HHHHC
T ss_pred             HHHhC
Confidence            99764

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A

Probab=99.74  E-value=3.4e-18  Score=145.61  Aligned_cols=120  Identities=18%  Similarity=0.297  Sum_probs=105.5

Q ss_pred             ccccccCCCCCCcccHHHHHHHHHhhCCC-----CccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHH
Q 014171          275 DQFDAIDVDKNGSISLEEMRQALAKDLPW-----KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWH  349 (429)
Q Consensus       275 ~~F~~~D~~~~G~i~~~el~~~l~~~~~~-----~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~  349 (429)
                      ..|..+|.|++|.|+.+||..++.. +|.     .++..++..+++.+|.|++|.|+|+||+..+...            
T Consensus         3 ~~F~~~D~d~~G~i~~~el~~~l~~-lg~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~------------   69 (165)
T 1k94_A            3 YTYFSAVAGQDGEVDAEELQRCLTQ-SGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL------------   69 (165)
T ss_dssp             HHHHHHHHGGGTSBCHHHHHHHHHH-HTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH------------
T ss_pred             HHHHHHhCCCCCcCCHHHHHHHHHH-hccccCCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH------------
Confidence            3588899999999999999999955 665     6789999999999999999999999999866432            


Q ss_pred             HHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          350 LRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       350 ~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                      ..++.+|+.+|+|++|+|+.+||+.++...|.      +..++..+  |++|.|+|+||+.++...
T Consensus        70 ~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~--d~dg~i~~~eF~~~~~~~  133 (165)
T 1k94_A           70 NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRY--SKNGRIFFDDYVACCVKL  133 (165)
T ss_dssp             HHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHH--CBTTBCBHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCceECHHHHHHHHHHhCCCCCHHHHHHHHHHh--CCCCeEcHHHHHHHHHHH
Confidence            34778999999999999999999999987763      78899988  899999999999998753

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5

Probab=99.74  E-value=3.9e-18  Score=149.07  Aligned_cols=135  Identities=22%  Similarity=0.401  Sum_probs=109.4

Q ss_pred             ccchHHHhhhhccccccCCC-CCCcccHHHHHHHHHhhCCCCc-cHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhc
Q 014171          264 TLDDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKL-KESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE  341 (429)
Q Consensus       264 ~~~~~~~~~l~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~~~-~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~  341 (429)
                      .++.+++   .++|..+|.+ ++|+|+.+||..++.. ++... +...+..+|..+|.|++|.|+|.||+.++.......
T Consensus        21 ~~~~~~i---~~~f~~fd~~~~~G~i~~~e~~~~l~~-~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~   96 (193)
T 1bjf_A           21 DFTEHEI---QEWYKGFLRDCPSGHLSMEEFKKIYGN-FFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGK   96 (193)
T ss_dssp             SCCHHHH---HHHHHHHHHHSTTSEEEHHHHHHHHTT-TSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSC
T ss_pred             CCCHHHH---HHHHHHHHHHCCCCCcCHHHHHHHHHH-hcCcCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHcCCC
Confidence            3555554   4557778887 8999999999999954 55433 467789999999999999999999998776543211


Q ss_pred             ccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcC----CC--------------CHHHHHHHhCCCCCCcccHHHHH
Q 014171          342 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL----KG--------------SIDPLLEEADIDKDGRISLSEFR  403 (429)
Q Consensus       342 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~----~~--------------~~~~~~~~~d~~~dg~i~~~ef~  403 (429)
                      .      ...+..+|+.+|.|++|+|+.+||+.++..    .|              .+..+|..+|.|+||.|+|+||+
T Consensus        97 ~------~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~  170 (193)
T 1bjf_A           97 L------EQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFI  170 (193)
T ss_dssp             H------HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHH
T ss_pred             H------HHHHHHHHhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCcccccHHHHHHHHHHHhCCCCCCeEeHHHHH
Confidence            1      346788999999999999999999988753    12              17889999999999999999999


Q ss_pred             HHHHh
Q 014171          404 RLLRT  408 (429)
Q Consensus       404 ~~~~~  408 (429)
                      .++..
T Consensus       171 ~~~~~  175 (193)
T 1bjf_A          171 RGAKS  175 (193)
T ss_dssp             HHHHH
T ss_pred             HHHhc
Confidence            99974

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A

Probab=99.74  E-value=2.1e-18  Score=152.65  Aligned_cols=135  Identities=20%  Similarity=0.273  Sum_probs=111.2

Q ss_pred             cchHHHhhhhccccccCCC-CCCcccHHHHHHHHHhhCCC-CccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcc
Q 014171          265 LDDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPW-KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE  342 (429)
Q Consensus       265 ~~~~~~~~l~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~-~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~  342 (429)
                      ++..+   +.++|..+|.+ ++|.|+.+||..++.. ++. ..+..++..+|..+|.|++|.|+|+||+.++........
T Consensus        30 ~~~~~---i~~~f~~~d~~~~~G~i~~~ef~~~l~~-~~~~~~~~~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~~~~~~~  105 (207)
T 2d8n_A           30 FSEEE---LCSWYQSFLKDCPTGRITQQQFQSIYAK-FFPDTDPKAYAQHVFRSFDSNLDGTLDFKEYVIALHMTTAGKT  105 (207)
T ss_dssp             CCHHH---HHHHHHHHHHHCTTSEEEHHHHHHHHHH-TCTTSCCHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHSCSSS
T ss_pred             CCHHH---HHHHHHHHHhhCCCCCCCHHHHHHHHHH-hccCCCcHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHHcCCCH
Confidence            45554   45557777877 7999999999999966 554 377889999999999999999999999988765432211


Q ss_pred             cccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCC----C----------------CHHHHHHHhCCCCCCcccHHHH
Q 014171          343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----G----------------SIDPLLEEADIDKDGRISLSEF  402 (429)
Q Consensus       343 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~----~----------------~~~~~~~~~d~~~dg~i~~~ef  402 (429)
                            ...+..+|+.+|+|++|+|+.+||+.++...    |                ++..+|..+|.|+||.|+|+||
T Consensus       106 ------~~~~~~~f~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef  179 (207)
T 2d8n_A          106 ------NQKLEWAFSLYDVDGNGTISKNEVLEIVMAIFKMITPEDVKLLPDDENTPEKRAEKIWKYFGKNDDDKLTEKEF  179 (207)
T ss_dssp             ------STTHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCHHHHHTSCTTTSSHHHHHHHHHHHTTCCTTCCEEHHHH
T ss_pred             ------HHHHHHHHHHhcCCCCCeEcHHHHHHHHHHHHHHhccccCCCcccccccHHHHHHHHHHHcCCCCCCcCcHHHH
Confidence                  1246789999999999999999999988764    3                2889999999999999999999


Q ss_pred             HHHHHhc
Q 014171          403 RRLLRTA  409 (429)
Q Consensus       403 ~~~~~~~  409 (429)
                      +.++.+.
T Consensus       180 ~~~~~~~  186 (207)
T 2d8n_A          180 IEGTLAN  186 (207)
T ss_dssp             HHHHHHC
T ss_pred             HHHHHhC
Confidence            9999864

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A

Probab=99.72  E-value=1.2e-18  Score=155.17  Aligned_cols=137  Identities=23%  Similarity=0.375  Sum_probs=112.5

Q ss_pred             cccchHHHhhhhccccccCC-----CC-C--CcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCc-ccHHHHHHH
Q 014171          263 STLDDEELADLRDQFDAIDV-----DK-N--GSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL-VDFSEFVAA  333 (429)
Q Consensus       263 ~~~~~~~~~~l~~~F~~~D~-----~~-~--G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~-I~~~eF~~~  333 (429)
                      ..+++.+++++.+.|..+|.     |+ +  |+|+.+||.. + ..+|..++.   .++++.+|.|++|. |+|+||+.+
T Consensus        43 t~~s~~ei~~l~~~F~~~D~~~~~~d~~~~dG~I~~~E~~~-l-~~lg~~~~~---~~lf~~~D~d~dG~~I~f~EF~~~  117 (214)
T 2l4h_A           43 TFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILS-L-PELKANPFK---ERICRVFSTSPAKDSLSFEDFLDL  117 (214)
T ss_dssp             CSCCHHHHHHHHHHHHHHSCGGGCCHHHHTTSEECHHHHTT-C-HHHHTSTTH---HHHHHHHCCSSSCCSEEHHHHHHH
T ss_pred             CCCCHHHHHHHHHHHHHhCcccccccccccCCcCCHHHHHH-h-hccCCChHH---HHHHHHhCcCCCCCEecHHHHHHH
Confidence            46789999999999999998     66 6  9999999999 7 446777664   46788899999999 999999988


Q ss_pred             HhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCC---------C--CHH----HHHHHhCCCCCCccc
Q 014171          334 TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK---------G--SID----PLLEEADIDKDGRIS  398 (429)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~---------~--~~~----~~~~~~d~~~dg~i~  398 (429)
                      +........   .  ..+++.+|+.||.|++|+|+.+||+.++...         .  +++    .+|..+|.|+||.|+
T Consensus       118 ~~~~~~~~~---~--~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~~~~~~~~~~D~d~dG~Is  192 (214)
T 2l4h_A          118 LSVFSDTAT---P--DIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTIN  192 (214)
T ss_dssp             HHHTSSCSC---H--HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHHHHHHHHHHHCCSCCSSBC
T ss_pred             HHHHcCCCC---H--HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHHhCCCCCCcCC
Confidence            765432211   1  3468899999999999999999999887533         1  133    599999999999999


Q ss_pred             HHHHHHHHHhc
Q 014171          399 LSEFRRLLRTA  409 (429)
Q Consensus       399 ~~ef~~~~~~~  409 (429)
                      |+||+.++.+.
T Consensus       193 ~~EF~~~~~~~  203 (214)
T 2l4h_A          193 LSEFQHVISRS  203 (214)
T ss_dssp             SHHHHHHHHTC
T ss_pred             HHHHHHHHHhC
Confidence            99999999864

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A

Probab=99.72  E-value=1.4e-17  Score=145.03  Aligned_cols=137  Identities=22%  Similarity=0.389  Sum_probs=109.9

Q ss_pred             ccchHHHhhhhccccccCCC-CCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcc
Q 014171          264 TLDDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE  342 (429)
Q Consensus       264 ~~~~~~~~~l~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~  342 (429)
                      .++++++.++   |+.+|.+ ++|+|+.+||..++....+...+...+..+|..+|.|++|.|+++||+.++....... 
T Consensus        21 ~~~~~~i~~~---~~~fd~~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~-   96 (190)
T 1fpw_A           21 YFDRREIQQW---HKGFLRDCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGT-   96 (190)
T ss_dssp             CSTHHHHHHH---HHHHHHHCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCCC-
T ss_pred             CCCHHHHHHH---HHHHHHHCCCCcCcHHHHHHHHHHHcCCCCcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHHccCC-
Confidence            4566665555   5555555 8999999999999976444445667899999999999999999999998776543221 


Q ss_pred             cccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcC----CC--------------CHHHHHHHhCCCCCCcccHHHHHH
Q 014171          343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL----KG--------------SIDPLLEEADIDKDGRISLSEFRR  404 (429)
Q Consensus       343 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~----~~--------------~~~~~~~~~d~~~dg~i~~~ef~~  404 (429)
                        .   ...+..+|+.+|.|++|+|+.+||..++..    .|              ++..+|..+|.|+||.|+++||+.
T Consensus        97 --~---~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~  171 (190)
T 1fpw_A           97 --L---EEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFRE  171 (190)
T ss_dssp             --S---THHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHH
T ss_pred             --c---HHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHHHhccccCcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHH
Confidence              1   235788999999999999999999988765    12              278899999999999999999999


Q ss_pred             HHHhc
Q 014171          405 LLRTA  409 (429)
Q Consensus       405 ~~~~~  409 (429)
                      ++.+.
T Consensus       172 ~~~~~  176 (190)
T 1fpw_A          172 GSKVD  176 (190)
T ss_dssp             HHHSS
T ss_pred             HHHhC
Confidence            99863

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A

Probab=99.71  E-value=4e-18  Score=156.44  Aligned_cols=141  Identities=20%  Similarity=0.285  Sum_probs=114.9

Q ss_pred             ccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccH------HHHHHHHHHhcCCCCCcccHHHHHHHHhhh
Q 014171          264 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKE------SRVLEILQAIDCNTDGLVDFSEFVAATLHV  337 (429)
Q Consensus       264 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~------~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~  337 (429)
                      .+++.+.++++++|..+|.|++|.|+.+||..++.. +|..++.      .++..++..+|.|++|.|+|+||+..+...
T Consensus         9 ~l~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~-l~~~~~~~~~~~~~~~~~l~~~~D~~~~g~i~~~Ef~~~~~~~   87 (263)
T 2f33_A            9 QSSLITASQFFEIWLHFDADGSGYLEGKELQNLIQE-LLQARKKAGLELSPEMKTFVDQYGQRDDGKIGIVELAHVLPTE   87 (263)
T ss_dssp             TTSCCCHHHHHHHHHHHCTTCSSSBCSHHHHHHHHH-HHHHHHHHTCCCCHHHHHHHHHHTTGGGCCBCHHHHHHHTTSC
T ss_pred             hcCcccHHHHHHHHHHhCCCCCCCcCHHHHHHHHHH-HHhhcCCCccchHHHHHHHHHHhCCCCCCcCcHHHHHHHHhhh
Confidence            456677788999999999999999999999999954 6655554      788999999999999999999999876432


Q ss_pred             hh------hcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCC----CC------HHH----HHHHhCCCCCCcc
Q 014171          338 HQ------LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----GS------IDP----LLEEADIDKDGRI  397 (429)
Q Consensus       338 ~~------~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~----~~------~~~----~~~~~d~~~dg~i  397 (429)
                      ..      ......   ...++.+|+.+|+|++|+|+.+||+.++...    |.      +..    ++..+|.|++|.|
T Consensus        88 ~~~~~~~~~~~~~~---~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i  164 (263)
T 2f33_A           88 ENFLLLFRCQQLKS---CEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKL  164 (263)
T ss_dssp             TTHHHHHGGGTSSC---HHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCB
T ss_pred             hhHHHHHHHhhccH---HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeE
Confidence            10      011111   3468899999999999999999999988755    32      343    9999999999999


Q ss_pred             cHHHHHHHHHh
Q 014171          398 SLSEFRRLLRT  408 (429)
Q Consensus       398 ~~~ef~~~~~~  408 (429)
                      +|+||+.++..
T Consensus       165 ~~~ef~~~~~~  175 (263)
T 2f33_A          165 ELTEMARLLPV  175 (263)
T ss_dssp             CHHHHHHHSCT
T ss_pred             cHHHHHHHHHH
Confidence            99999998764

>2f33_A Calbindin; EF-hand, Ca2+-binding, metal binding protein; NMR {Rattus norvegicus} PDB: 2g9b_A

Probab=99.71  E-value=1.7e-17  Score=152.19  Aligned_cols=137  Identities=20%  Similarity=0.309  Sum_probs=111.5

Q ss_pred             HhhhhccccccCCCCCCcccHHHHHHHHHhhC---CCCccHHHHHH----HHHHhcCCCCCcccHHHHHHHHhhh-----
Q 014171          270 LADLRDQFDAIDVDKNGSISLEEMRQALAKDL---PWKLKESRVLE----ILQAIDCNTDGLVDFSEFVAATLHV-----  337 (429)
Q Consensus       270 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~---~~~~~~~~~~~----l~~~~d~~~~g~I~~~eF~~~~~~~-----  337 (429)
                      ..+++.+|..+|.|++|+|+.+||..++....   |..++..++..    ++..+|.+++|.|+|+||+..+...     
T Consensus       102 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~~~~  181 (263)
T 2f33_A          102 CEEFMKTWRKYDTDHSGFIETEELKNFLKDLLEKANKTVDDTKLAEYTDLMLKLFDSNNDGKLELTEMARLLPVQENFLL  181 (263)
T ss_dssp             HHHHHHHHTTSSTTTCSSBCHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHTCSSSSSCBCHHHHHHHSCTTTCSHH
T ss_pred             HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHhcCCCCCCeEcHHHHHHHHHHHHHHHH
Confidence            34688899999999999999999999996522   88888888877    9999999999999999999866431     


Q ss_pred             hhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCC----------CCHHHHHHH-hCCCCCCcccHHHHHHHH
Q 014171          338 HQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----------GSIDPLLEE-ADIDKDGRISLSEFRRLL  406 (429)
Q Consensus       338 ~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~----------~~~~~~~~~-~d~~~dg~i~~~ef~~~~  406 (429)
                      ........   ...+..+|+.+|+|++|+|+.+||+.++...          .+++.++.. +|.|+||.|+|+||+.+|
T Consensus       182 ~~~~~~~~---~~~~~~~F~~~D~d~~G~is~~El~~~l~~~~~~~~~~~~~~e~~~~~~~~~D~d~dG~i~~~EF~~~~  258 (263)
T 2f33_A          182 KFQGIKMC---GKEFNKAFELYDQDGNGYIDENELDALLKDLCEKNKQELDINNISTYKKNIMALSDGGKLYRTDLALIL  258 (263)
T ss_dssp             HHHHTCCC---HHHHHHHHHHHCCSSSSCEEHHHHHHHHHHHHHHCTTTCCTTTHHHHHHHHHTTSBTTEECGGGTHHHH
T ss_pred             HhcCcchH---HHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhccCCCCeEcHHHHHHHH
Confidence            11111111   2468889999999999999999999887532          247888887 799999999999999999


Q ss_pred             Hhc
Q 014171          407 RTA  409 (429)
Q Consensus       407 ~~~  409 (429)
                      .+.
T Consensus       259 ~~~  261 (263)
T 2f33_A          259 SAG  261 (263)
T ss_dssp             CCS
T ss_pred             hcc
Confidence            764

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}

Probab=99.71  E-value=2.1e-17  Score=151.39  Aligned_cols=138  Identities=21%  Similarity=0.355  Sum_probs=113.8

Q ss_pred             ccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhccc
Q 014171          264 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH  343 (429)
Q Consensus       264 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~  343 (429)
                      .++.+++..+.+.|..  .+++|.|+.+||..++....+...+..++..+|..+|.|++|.|+|+||+.++........ 
T Consensus        87 ~~s~~ei~~l~~~fd~--~~~~G~I~~~ef~~~l~~~~~~~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~-  163 (256)
T 2jul_A           87 KFTKKELQSLYRGFKN--ECPTGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTV-  163 (256)
T ss_dssp             TSCHHHHHHHHHHHHH--HCTTSSEEHHHHHHHHHHHCCSSCCHHHHHHHHHHSSCSCCSEECSHHHHHHHHHHHSCCH-
T ss_pred             CCCHHHHHHHHHHHHh--hCCCCcCCHHHHHHHHHHHcccCCcHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHhccCh-
Confidence            4677777777555553  2479999999999999775556778889999999999999999999999988765432211 


Q ss_pred             ccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCC----C--------------CHHHHHHHhCCCCCCcccHHHHHHH
Q 014171          344 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----G--------------SIDPLLEEADIDKDGRISLSEFRRL  405 (429)
Q Consensus       344 ~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~----~--------------~~~~~~~~~d~~~dg~i~~~ef~~~  405 (429)
                           .+.+..+|+.+|.|++|+|+.+||..++...    |              +++.+|..+|.|+||.|+|+||+.+
T Consensus       164 -----~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~  238 (256)
T 2jul_A          164 -----HEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQDGVVTIDEFLET  238 (256)
T ss_dssp             -----HHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSCCCCHHHHHHHHHHHSCCSTTCSBCHHHHHHH
T ss_pred             -----HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccchhhHHHHHHHHHHHHCCCCCCcEeHHHHHHH
Confidence                 3568899999999999999999999987643    2              2788999999999999999999999


Q ss_pred             HHhc
Q 014171          406 LRTA  409 (429)
Q Consensus       406 ~~~~  409 (429)
                      +.+.
T Consensus       239 ~~~~  242 (256)
T 2jul_A          239 CQKD  242 (256)
T ss_dssp             HHHC
T ss_pred             HHhC
Confidence            9863

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A

Probab=99.67  E-value=1.4e-17  Score=153.64  Aligned_cols=138  Identities=22%  Similarity=0.328  Sum_probs=108.7

Q ss_pred             hhhhccccccCCCCCCcccHHHHHHHHHhhC---CCCccHHHHHH----HHHHhcCCCCCcccHHHHHHHHhhhhhh--c
Q 014171          271 ADLRDQFDAIDVDKNGSISLEEMRQALAKDL---PWKLKESRVLE----ILQAIDCNTDGLVDFSEFVAATLHVHQL--E  341 (429)
Q Consensus       271 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~---~~~~~~~~~~~----l~~~~d~~~~g~I~~~eF~~~~~~~~~~--~  341 (429)
                      .+++.+|..+|.|++|+|+.+||..++....   |..++..++..    ++..+|.|++|.|+|+||+..+......  .
T Consensus       104 ~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~~~~~~~  183 (272)
T 2be4_A          104 VEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKNKDGRLDLNDLARILALQENFLLQ  183 (272)
T ss_dssp             HHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEEEHHHHGGGSCCSSCSSTT
T ss_pred             HHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccCCCCcCcHHHHHHHHhhhHHHHhh
Confidence            4678889999999999999999999996522   77888877754    9999999999999999998765321000  0


Q ss_pred             c----cccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC----------CHHH----HHHHhCCCCCCcccHHHHH
Q 014171          342 E----HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----------SIDP----LLEEADIDKDGRISLSEFR  403 (429)
Q Consensus       342 ~----~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~----------~~~~----~~~~~d~~~dg~i~~~ef~  403 (429)
                      .    .........+..+|+.+|+|++|+|+.+||+.++...+          +++.    ++..+|.|+||.|+|+||+
T Consensus       184 ~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~D~d~dG~is~~EF~  263 (272)
T 2be4_A          184 FKMDASSQVERKRDFEKIFAHYDVSRTGALEGPEVDGFVKDMMELVRPSISGGDLDKFRECLLTHCDMNKDGKIQKSELA  263 (272)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHHHCTTCCSEEETHHHHHHHHHHHHHHSSSCCHHHHHHHHHHHHHHHCCSTTCEEEHHHHH
T ss_pred             hhhhhccccccHHHHHHHHHHhCCCCCCeecHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhCCCCCCcCcHHHHH
Confidence            0    01112235688999999999999999999999886432          1444    9999999999999999999


Q ss_pred             HHHHh
Q 014171          404 RLLRT  408 (429)
Q Consensus       404 ~~~~~  408 (429)
                      .+|..
T Consensus       264 ~~~~~  268 (272)
T 2be4_A          264 LCLGL  268 (272)
T ss_dssp             HHTTC
T ss_pred             HHHcc
Confidence            99874

>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L

Probab=99.66  E-value=9.1e-17  Score=167.21  Aligned_cols=130  Identities=19%  Similarity=0.283  Sum_probs=116.3

Q ss_pred             cchHH-HhhhhccccccCCCCCCcccHHHHHHHHHhhC-------CCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhh
Q 014171          265 LDDEE-LADLRDQFDAIDVDKNGSISLEEMRQALAKDL-------PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH  336 (429)
Q Consensus       265 ~~~~~-~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~-------~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~  336 (429)
                      +++++ .++++++|+.+| |++|.|+.+||..+|...+       +..++.++++.++..+|.|++|.|+|+||+..+..
T Consensus       525 ls~~e~~~~l~~~F~~~D-d~dG~Is~~El~~~L~~l~~~~~~~~g~~~s~~~~~~l~~~~D~d~~G~I~f~EF~~l~~~  603 (714)
T 3bow_A          525 ANEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTK  603 (714)
T ss_dssp             CSGGGCCHHHHHHHHHHH-GGGTSBCHHHHHHHHHHHHTTCTTSCCSCCCHHHHHHHHHHHCCSSCSSBCHHHHHHHHHH
T ss_pred             CChhhHHHHHHHHHHHHc-CCCCcCCHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence            56677 889999999999 9999999999999996642       67899999999999999999999999999987654


Q ss_pred             hhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          337 VHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       337 ~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                      .            ..++.+|+.||+|++|+|+.+||+.++...|.      ++.++..+| |+||.|+|+||+.+|..
T Consensus       604 ~------------~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~~ls~~~~~~l~~~~D-d~dG~Isf~EF~~~l~~  668 (714)
T 3bow_A          604 I------------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVR  668 (714)
T ss_dssp             H------------HHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTEECCHHHHHHHHHHHS-CTTCEECHHHHHHHHHH
T ss_pred             H------------HHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHH
Confidence            3            34778999999999999999999999987773      899999999 99999999999998864

>2be4_A Hypothetical protein LOC449832; DR.36843, BC083168, calicium binding, EF-hand superfamily, S genomics, protein structure initiative, PSI; 2.10A {Danio rerio} PDB: 2q4u_A

Probab=99.66  E-value=1.9e-17  Score=152.69  Aligned_cols=142  Identities=25%  Similarity=0.415  Sum_probs=113.4

Q ss_pred             ccchHHHhhhhccccccCCCCCCcccHHHHHHHHHh---hCCC--CccHHHHHHH----HHHhcCCCCCcccHHHHHHHH
Q 014171          264 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK---DLPW--KLKESRVLEI----LQAIDCNTDGLVDFSEFVAAT  334 (429)
Q Consensus       264 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~---~~~~--~~~~~~~~~l----~~~~d~~~~g~I~~~eF~~~~  334 (429)
                      .+++.+.++++++|..+|.|++|+|+.+||..++..   .+|.  .++..++..+    |..+|.|++|.|+|+||+..+
T Consensus         4 ~~~~~~~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~~~~lg~~~~~~~~~~~~~~~~~f~~~D~d~~g~i~~~Ef~~~~   83 (272)
T 2be4_A            4 AFANLDAAGFLQIWQHFDADDNGYIEGKELDDFFRHMLKKLQPKDKITDERVQQIKKSFMSAYDATFDGRLQIEELANMI   83 (272)
T ss_dssp             CCCCCCHHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHHSTTSCCCHHHHHHHHHHHSCHHHHTCCSEEEHHHHHHHH
T ss_pred             HHHhcCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHhcCCCCCcEeHHHHHHHH
Confidence            345566678999999999999999999999999952   5788  8888888765    477899999999999999874


Q ss_pred             hh--------hhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCC----CC------H----HHHHHHhCCC
Q 014171          335 LH--------VHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----GS------I----DPLLEEADID  392 (429)
Q Consensus       335 ~~--------~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~----~~------~----~~~~~~~d~~  392 (429)
                      ..        .........   ...++.+|+.+|+|++|+|+.+||+.++...    |.      +    ..++..+|.|
T Consensus        84 ~~~~~~~~~~~~~~~~~~~---~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~D~~  160 (272)
T 2be4_A           84 LPQEENFLLIFRREAPLDN---SVEFMKIWRKYDADSSGYISAAELKNFLKDLFLQHKKKIPPNKLDEYTDAMMKIFDKN  160 (272)
T ss_dssp             SCHHHHHHHHHHHHSCCCC---HHHHHHHHHHHCTTCCSEEEGGGHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSS
T ss_pred             hhhhHHHHHHHhhccCccc---HHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHhccC
Confidence            32        111111111   2468899999999999999999999988754    32      2    4599999999


Q ss_pred             CCCcccHHHHHHHHHh
Q 014171          393 KDGRISLSEFRRLLRT  408 (429)
Q Consensus       393 ~dg~i~~~ef~~~~~~  408 (429)
                      ++|.|+|+||+.++..
T Consensus       161 ~dg~i~~~ef~~~~~~  176 (272)
T 2be4_A          161 KDGRLDLNDLARILAL  176 (272)
T ss_dssp             CSSEEEHHHHGGGSCC
T ss_pred             CCCcCcHHHHHHHHhh
Confidence            9999999999988754

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A

Probab=99.64  E-value=8.6e-16  Score=120.92  Aligned_cols=98  Identities=27%  Similarity=0.375  Sum_probs=84.6

Q ss_pred             hCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCC
Q 014171          300 DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK  379 (429)
Q Consensus       300 ~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~  379 (429)
                      ++|. +++.+++.+++.+|  ++|.|+|+||+..+...    . ..   ...++.+|+.||+|++|+|+.+||+.++...
T Consensus         2 slG~-~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~~----~-~~---~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~   70 (108)
T 2pvb_A            2 SFAG-LKDADVAAALAACS--AADSFKHKEFFAKVGLA----S-KS---LDDVKKAFYVIDQDKSGFIEEDELKLFLQNF   70 (108)
T ss_dssp             CCTT-SCHHHHHHHHHHTC--STTCCCHHHHHHHHTGG----G-SC---HHHHHHHHHHHCTTCSSSBCHHHHHTGGGGT
T ss_pred             CcCC-CCHHHHHHHHHHhC--CCCcCcHHHHHHHHhCC----h-hH---HHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH
Confidence            4788 99999999999998  79999999999876321    1 11   3468899999999999999999999999887


Q ss_pred             ---CC------HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          380 ---GS------IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       380 ---~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                         |.      +..++..+|.|+||.|+|+||+.++++
T Consensus        71 ~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  108 (108)
T 2pvb_A           71 SPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIKA  108 (108)
T ss_dssp             CTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred             hccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhC
Confidence               42      889999999999999999999998863

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A

Probab=99.64  E-value=6.1e-16  Score=122.02  Aligned_cols=97  Identities=22%  Similarity=0.364  Sum_probs=84.3

Q ss_pred             CCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCC-
Q 014171          301 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK-  379 (429)
Q Consensus       301 ~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~-  379 (429)
                      +|..+++++++++++.+|  ++|.|+|+||+..+...     ...   ...++.+|+.||+|++|+|+.+||+.++... 
T Consensus         3 l~~~~~~~ei~~~~~~~D--~~g~i~~~eF~~~~~~~-----~~~---~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~   72 (109)
T 3fs7_A            3 ITDILSAKDIESALSSCQ--AADSFNYKSFFSTVGLS-----SKT---PDQIKKVFGILDQDKSGFIEEEELQLFLKNFS   72 (109)
T ss_dssp             GGGTSCHHHHHHHHHHTC--STTCCCHHHHHHHHTCT-----TCC---HHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTC
T ss_pred             ccCcCCHHHHHHHHHhcC--CCCcCcHHHHHHHHhcC-----CCc---HHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHh
Confidence            567789999999999998  79999999999876531     111   3468899999999999999999999999887 


Q ss_pred             --CC------HHHHHHHhCCCCCCcccHHHHHHHHH
Q 014171          380 --GS------IDPLLEEADIDKDGRISLSEFRRLLR  407 (429)
Q Consensus       380 --~~------~~~~~~~~d~~~dg~i~~~ef~~~~~  407 (429)
                        +.      +..++..+|.|+||.|+|+||+.+|+
T Consensus        73 ~~~~~~~~~~~~~~~~~~D~~~dg~i~~~EF~~~~~  108 (109)
T 3fs7_A           73 SSARVLTSAETKAFLAAGDTDGDGKIGVEEFQSLVK  108 (109)
T ss_dssp             TTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred             cccccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence              42      88999999999999999999999986

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4

Probab=99.62  E-value=8.8e-16  Score=121.06  Aligned_cols=98  Identities=24%  Similarity=0.378  Sum_probs=84.8

Q ss_pred             hCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCC
Q 014171          300 DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK  379 (429)
Q Consensus       300 ~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~  379 (429)
                      ++|..+++.+++.+++.+|  ++|.|+|+||+..+...    . ..   ...++.+|+.||+|++|+|+.+||+.++...
T Consensus         2 slg~~~~~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~----~-~~---~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~   71 (109)
T 1bu3_A            2 AFSGILADADVAAALKACE--AADSFNYKAFFAKVGLT----A-KS---ADDIKKAFFVIDQDKSGFIEEDELKLFLQVF   71 (109)
T ss_dssp             CCSCSSCHHHHHHHHHHTC--STTCCCHHHHHHHHTGG----G-SC---HHHHHHHHHHHCTTCSSSEEHHHHHTHHHHH
T ss_pred             cccccCCHHHHHHHHHHhC--CCCcCcHHHHHHHHHcC----h-hh---HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence            4789999999999999998  89999999999876421    1 11   3468899999999999999999999998876


Q ss_pred             ---C------CHHHHHHHhCCCCCCcccHHHHHHHHH
Q 014171          380 ---G------SIDPLLEEADIDKDGRISLSEFRRLLR  407 (429)
Q Consensus       380 ---~------~~~~~~~~~d~~~dg~i~~~ef~~~~~  407 (429)
                         |      ++..++..+|.|+||.|+|+||+.+++
T Consensus        72 ~~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  108 (109)
T 1bu3_A           72 SAGARALTDAETKAFLKAGDSDGDGAIGVDEWAALVK  108 (109)
T ss_dssp             STTCCCCCHHHHHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred             cccCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence               4      288999999999999999999999885

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A

Probab=99.62  E-value=6.7e-16  Score=121.96  Aligned_cols=99  Identities=28%  Similarity=0.411  Sum_probs=85.0

Q ss_pred             hCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCC
Q 014171          300 DLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK  379 (429)
Q Consensus       300 ~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~  379 (429)
                      ++|..++..+++.+++.+|  ++|.|+|+||+..+..    .. ..   ...++.+|+.+|+|++|+|+.+||+.++...
T Consensus         2 alG~~~t~~e~~~~~~~~d--~~g~i~~~ef~~~~~~----~~-~~---~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~   71 (110)
T 1pva_A            2 AAKDLLKADDIKKALDAVK--AEGSFNHKKFFALVGL----KA-MS---ANDVKKVFKAIDADASGFIEEEELKFVLKSF   71 (110)
T ss_dssp             CHHHHSCHHHHHHHHHHTC--STTCCCHHHHHHHHTC----TT-SC---HHHHHHHHHHHCTTCSSSBCHHHHHTGGGGT
T ss_pred             cccccCCHHHHHHHHHhcC--CCCcCcHHHHHHHHcc----Cc-ch---HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            3567789999999999998  8999999999987632    11 11   3468899999999999999999999999887


Q ss_pred             ---C------CHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          380 ---G------SIDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       380 ---~------~~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                         +      ++..++..+|.|++|.|+|+||+.++++
T Consensus        72 ~~~g~~~~~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~  109 (110)
T 1pva_A           72 AADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHE  109 (110)
T ss_dssp             CTTCCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred             hhcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence               4      2889999999999999999999999875

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4

Probab=99.62  E-value=7.9e-16  Score=121.35  Aligned_cols=98  Identities=27%  Similarity=0.397  Sum_probs=84.2

Q ss_pred             CCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCC-
Q 014171          301 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK-  379 (429)
Q Consensus       301 ~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~-  379 (429)
                      +|..+++++++++++.+|.  +|.|+|+||+..+...     ...   ...++.+|+.||+|++|+|+.+||+.++... 
T Consensus         2 l~~~~s~~ei~~~~~~~d~--~g~i~~~eF~~~~~~~-----~~~---~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~   71 (109)
T 5pal_A            2 MTKVLKADDINKAISAFKD--PGTFDYKRFFHLVGLK-----GKT---DAQVKEVFEILDKDQSGFIEEEELKGVLKGFS   71 (109)
T ss_dssp             GGGTSCHHHHHHHHHHTCS--TTCCCHHHHHHHHTCT-----TCC---HHHHHHHHHHHCTTCSSEECHHHHHTHHHHHC
T ss_pred             CCCcCCHHHHHHHHHHhCC--CCcCcHHHHHHHHhhc-----cCc---HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHH
Confidence            4567899999999999997  8999999999876431     111   3468899999999999999999999998876 


Q ss_pred             --C------CHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          380 --G------SIDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       380 --~------~~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                        +      ++..++..+|.|+||.|+|+||+.+|++
T Consensus        72 ~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  108 (109)
T 5pal_A           72 AHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQ  108 (109)
T ss_dssp             TTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             HcCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHh
Confidence              4      2889999999999999999999999976

>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1

Probab=99.62  E-value=2.6e-16  Score=168.51  Aligned_cols=141  Identities=20%  Similarity=0.324  Sum_probs=120.5

Q ss_pred             hhcccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhh
Q 014171          261 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL  340 (429)
Q Consensus       261 ~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~  340 (429)
                      ....+++.+...++.+|..+|.|++|+|+.+||..+|.. +|..+++.++..+|..+|.|++|.|+|+||+.++......
T Consensus       715 ~~~~l~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~-~g~~~~~~~~~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~  793 (863)
T 1sjj_A          715 DAKGISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLIS-MGYNMGEAEFARIMSIVDPNRMGVVTFQAFIDFMSRETAD  793 (863)
T ss_dssp             CCCCSSHHHHHHHHHHHTTTCSSSSSEEESTTHHHHHHH-HTCCCCTHHHHHHHHHHCTTSCSEEETTHHHHTHHHHSTT
T ss_pred             hccCCCHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHH-cCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcC
Confidence            345667888899999999999999999999999999954 7999999999999999999999999999999877543221


Q ss_pred             cccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCCHHHHHHHhCCC-----CCCcccHHHHHHHHHhc
Q 014171          341 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADID-----KDGRISLSEFRRLLRTA  409 (429)
Q Consensus       341 ~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~~~~~~~~~d~~-----~dg~i~~~ef~~~~~~~  409 (429)
                      ..  .   .+.+..+|+.| .|++|+|+.+||+.++. ..+++.++..+|.|     +||.|+|+||+.+|.+.
T Consensus       794 ~~--~---~~~l~~aF~~~-~d~~G~Is~~El~~~l~-~~~~~~l~~~~d~~~~~~~~dg~I~~~eF~~~~~~~  860 (863)
T 1sjj_A          794 TD--T---ADQVMASFKIL-AGDKNYITVDELRRELP-PDQAEYCIARMAPYNGRDAVPGALDYMSFSTALYGE  860 (863)
T ss_dssp             CS--S---SHHHHHHHHGG-GTSSSEEEHHHHHHHSC-HHHHHHHHHHSEECCSSCCCTTEEESHHHHHHHSCC
T ss_pred             CC--C---HHHHHHHHHHH-hCCCCcCcHHHHHHHCC-HHHHHHHHHHcchhcCCCCCCCceeHHHHHHHHhcC
Confidence            11  1   23578899999 89999999999999997 33589999999987     69999999999999753

>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A

Probab=99.61  E-value=1.9e-16  Score=161.40  Aligned_cols=130  Identities=15%  Similarity=0.153  Sum_probs=59.6

Q ss_pred             hhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHH
Q 014171          271 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL  350 (429)
Q Consensus       271 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~  350 (429)
                      ..++++|+.+|.|++|+|+.+||..+|. .+|..+++++++.+|+.+|.|++|.|+|+||+.++.....         ..
T Consensus        11 ~~l~~~F~~fD~d~dG~Is~~El~~~l~-~lg~~~s~~el~~lf~~~D~d~~G~I~f~EF~~~~~~l~~---------~~   80 (624)
T 1djx_A           11 HWIHSCLRKADKNKDNKMNFKELKDFLK-ELNIQVDDGYARKIFRECDHSQTDSLEDEEIETFYKMLTQ---------RA   80 (624)
T ss_dssp             ----------------------------------------------------------CTTHHHHHHTC---------CH
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHH-HcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHhcc---------HH
Confidence            3588999999999999999999999995 4899999999999999999999999999999987764321         12


Q ss_pred             HHHHHhccccCCCCCccCHHHHHhhhcCC-C-------CHHHHHHHhCCC----CCCcccHHHHHHHHHhccc
Q 014171          351 RSQAAFEKFDIDRDGFITPEELRMHTGLK-G-------SIDPLLEEADID----KDGRISLSEFRRLLRTASI  411 (429)
Q Consensus       351 ~l~~~F~~~D~~~~G~I~~~el~~~~~~~-~-------~~~~~~~~~d~~----~dg~i~~~ef~~~~~~~~~  411 (429)
                      .++++|+.||++ +|+|+.+||++++... +       +++++++++|.|    ++|.|+|+||+.+|.+..+
T Consensus        81 el~~aF~~fD~~-~G~Is~~EL~~fL~~~qge~~ls~ee~~~ii~~~d~d~~~~~dG~Is~deF~~~L~s~~~  152 (624)
T 1djx_A           81 EIDRAFEEAAGS-AETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSADG  152 (624)
T ss_dssp             HHHHHHHHHHTT-SSSEEHHHHHHHHHHTSCCSSCSHHHHHHHHHHHCCCHHHHHTTEECHHHHHHHHHSTTT
T ss_pred             HHHHHHHHhcCC-CCeecHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCChhhccCCCCCHHHHHHHhcCccc
Confidence            578899999985 9999999999998743 3       278999999998    7999999999999987653

>2ggz_A Guanylyl cyclase-activating protein 3; EF hand, guanylate cyclase activating protein, GCAP, GCAP3, GCAP-3, lyase activator; 3.00A {Homo sapiens}

Probab=99.61  E-value=3.4e-15  Score=132.48  Aligned_cols=152  Identities=16%  Similarity=0.234  Sum_probs=109.0

Q ss_pred             hHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhc--ccc
Q 014171          267 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE--EHD  344 (429)
Q Consensus       267 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~--~~~  344 (429)
                      +.....+..+|..+|.|++|.|+.+||..++.. ++...+..++..+|..+|.|++|.|+++||..++.......  ...
T Consensus        53 ~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~-~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~~~~~~  131 (211)
T 2ggz_A           53 QKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNL-IMQEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTL  131 (211)
T ss_dssp             HHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH-HSCSSHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHTTSSCCCSC
T ss_pred             cchHHHHHHHHHHHcCCCCCeEeHHHHHHHHHH-hccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCccc
Confidence            344456888899999999999999999999965 56667788999999999999999999999998776543211  111


Q ss_pred             cHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCCHHHHHHHhCCCCCCcccHHHHHHHHHhcc---ccCCCCCCCCC
Q 014171          345 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTAS---ISSRNVPPSPS  421 (429)
Q Consensus       345 ~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~---~~~~~~~~~~~  421 (429)
                      ..  .+.+..+|+.+|.|++|.|+.+||..++....++.+++..       .++|+||+.+|.+..   ......||++.
T Consensus       132 ~~--~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~-------~~d~~~f~~~~~~~~~~~~~~~~~~~~~~  202 (211)
T 2ggz_A          132 SP--EEFINLVFHKIDINNDGELTLEEFINGMAKDQDLLEIVYK-------SFDFSNVLRVICNGKQPDMETDSSKSPDK  202 (211)
T ss_dssp             TH--HHHHHHHHHHHCTTCSSSBCHHHHHHHHHTTTTTHHHHHH-------HSCTTHHHHHHHHHC--------------
T ss_pred             cH--HHHHHHHHHHhCCCCCCCCcHHHHHHHHHhCHHHHHHHhc-------cCCHHHHHHHHhcCCCCchhhcCCCCCcc
Confidence            11  2347789999999999999999999999988888888884       344999999998764   22223334344


Q ss_pred             CCCCCCC
Q 014171          422 GHRNPRK  428 (429)
Q Consensus       422 ~~~~~~~  428 (429)
                      ....|+|
T Consensus       203 ~~~~~~~  209 (211)
T 2ggz_A          203 AGLGKVK  209 (211)
T ss_dssp             -------
T ss_pred             ccccccc
Confidence            4445655

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A

Probab=99.60  E-value=8.5e-16  Score=121.12  Aligned_cols=98  Identities=22%  Similarity=0.301  Sum_probs=83.5

Q ss_pred             CCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCC-
Q 014171          301 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK-  379 (429)
Q Consensus       301 ~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~-  379 (429)
                      +|..+++.+++.+++.+|  ++|.|+|+||+..+...    . ..   ...++.+|+.+|+|++|+|+.+||+.++... 
T Consensus         2 lg~~~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~----~-~~---~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~   71 (109)
T 1rwy_A            2 MTDLLSAEDIKKAIGAFT--AADSFDHKKFFQMVGLK----K-KS---ADDVKKVFHILDKDKSGFIEEDELGSILKGFS   71 (109)
T ss_dssp             HHHHSCHHHHHHHHHTTC--STTCCCHHHHHHHHTGG----G-SC---HHHHHHHHHHHSTTCSSEECHHHHHTHHHHHC
T ss_pred             CCCcCCHHHHHHHHHHcC--CCCcEeHHHHHHHHhcC----c-ch---HHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHh
Confidence            455688999999999998  89999999999876321    1 11   3468899999999999999999999998876 


Q ss_pred             --C------CHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          380 --G------SIDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       380 --~------~~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                        +      +++.++..+|.|++|.|+|+||+.++.+
T Consensus        72 ~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  108 (109)
T 1rwy_A           72 SDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE  108 (109)
T ss_dssp             TTCCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred             ccCCCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHc
Confidence              3      2889999999999999999999999875

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A

Probab=99.60  E-value=2e-15  Score=118.73  Aligned_cols=97  Identities=21%  Similarity=0.315  Sum_probs=82.9

Q ss_pred             CCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCC-
Q 014171          301 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK-  379 (429)
Q Consensus       301 ~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~-  379 (429)
                      ++..+++.+++.++..+|  ++|.|+|+||+..+...    . ..   ...++.+|+.||+|++|+|+.+||+.++... 
T Consensus         2 l~~~~t~~e~~~~~~~~d--~~g~i~~~eF~~~~~~~----~-~~---~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~   71 (108)
T 1rro_A            2 ITDILSAEDIAAALQECQ--DPDTFEPQKFFQTSGLS----K-MS---ASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQ   71 (108)
T ss_dssp             GGGTSCHHHHHHHHHHTC--STTCCCHHHHHHHHSGG----G-SC---HHHHHHHHHHHCTTCSSEECTHHHHTGGGGTC
T ss_pred             ccccCCHHHHHHHHHHcc--CCCCcCHHHHHHHHhcC----c-cc---HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHh
Confidence            456789999999999998  89999999999876321    1 11   3468899999999999999999999999887 


Q ss_pred             --C------CHHHHHHHhCCCCCCcccHHHHHHHHH
Q 014171          380 --G------SIDPLLEEADIDKDGRISLSEFRRLLR  407 (429)
Q Consensus       380 --~------~~~~~~~~~d~~~dg~i~~~ef~~~~~  407 (429)
                        |      ++..++..+|.|+||.|+|+||+.+|+
T Consensus        72 ~~g~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  107 (108)
T 1rro_A           72 SDARELTESETKSLMDAADNDGDGKIGADEFQEMVH  107 (108)
T ss_dssp             TTSCCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred             hccCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence              3      288899999999999999999999885

>1y1x_A Leishmania major homolog of programmed cell death protein; SGPP, structural genomics, PSI; 1.95A {Leishmania major} SCOP: a.39.1.8

Probab=99.56  E-value=9.5e-15  Score=127.44  Aligned_cols=124  Identities=19%  Similarity=0.196  Sum_probs=105.3

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHH
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR  351 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~  351 (429)
                      ++..+|..+|.|++|.|+.+||..++..       ..++..+|..+|.|++|.|+.+||..++......   -.   ...
T Consensus        64 ~~~~l~~~~D~d~dG~I~~~EF~~~~~~-------~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~g~~---~~---~~~  130 (191)
T 1y1x_A           64 TTEKLLHMYDKNHSGEITFDEFKDLHHF-------ILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQ---VS---EQT  130 (191)
T ss_dssp             HHHHHHHHHCTTCSSSBCHHHHHHHHHH-------HHHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCC---CC---HHH
T ss_pred             HHHHHHHHhCCCCCCeEcHHHHHHHHHH-------HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhCCC---CC---HHH
Confidence            3555688899999999999999999854       3688999999999999999999999877543221   11   235


Q ss_pred             HHHHhccccCCCCCccCHHHHHhhhcCCCCHHHHHHHhCCCCCCc--ccHHHHHHHHHh
Q 014171          352 SQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGR--ISLSEFRRLLRT  408 (429)
Q Consensus       352 l~~~F~~~D~~~~G~I~~~el~~~~~~~~~~~~~~~~~d~~~dg~--i~~~ef~~~~~~  408 (429)
                      +..+|+.+|.|++|.|+.+||..++.....+..+|+.+|.|++|.  ++|+||+.++..
T Consensus       131 ~~~~~~~~D~d~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~dG~i~~~~~eF~~~~~~  189 (191)
T 1y1x_A          131 FQALMRKFDRQRRGSLGFDDYVELSIFVCRVRNVFAFYDRERTGQVTFTFDTFIGGSVS  189 (191)
T ss_dssp             HHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHHHHCTTCCSEEEEEHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCeEeHHHHHHHHHHHHHHHHHHHHhCcCCCceEEeeHHHHHHHHHh
Confidence            778999999999999999999999987777889999999999999  789999998864

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}

Probab=99.56  E-value=2e-15  Score=123.93  Aligned_cols=97  Identities=21%  Similarity=0.314  Sum_probs=61.3

Q ss_pred             HHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC-C------
Q 014171          309 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-S------  381 (429)
Q Consensus       309 ~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~-~------  381 (429)
                      .++++|+.+|.|++|.|+|+||+..+......     ......++.+|+.||+|++|+|+.+||+.++...| +      
T Consensus         4 ~~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~-----~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~e   78 (135)
T 3h4s_E            4 TEKSMLLETTSTTKMETKYEDMLPVMAEKMDV-----EEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKED   78 (135)
T ss_dssp             ---------------CCCC-----------CH-----HHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTCCCCCHHH
T ss_pred             hHHHHHHHHcCCCCCcEeHHHHHHHHHHHccc-----cchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHH
Confidence            45789999999999999999999876543211     11235688999999999999999999999998877 2      


Q ss_pred             HHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          382 IDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       382 ~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      ++.++..+|.|+||.|+|+||+.+|.+..
T Consensus        79 ~~~~~~~~D~d~dG~I~~~EF~~~~~~~~  107 (135)
T 3h4s_E           79 AQGMVREGDLDGDGALNQTEFCVLMVRLS  107 (135)
T ss_dssp             HHHHHHHHCSSCSSSBCHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCCCcHHHHHHHHHHhC
Confidence            89999999999999999999999998754

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3

Probab=99.56  E-value=2e-15  Score=161.84  Aligned_cols=125  Identities=19%  Similarity=0.304  Sum_probs=100.7

Q ss_pred             HHhhhhccccccCCCCCCcccHHHHHHHHHhhCCC--------CccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhh
Q 014171          269 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW--------KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL  340 (429)
Q Consensus       269 ~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~--------~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~  340 (429)
                      +.++++++|..+| +++|.|+.+||..+|.. ++.        .++..+++.+++.+|.|++|.|+|+||+..+...   
T Consensus       532 ~~~~l~~~F~~~D-~~dG~Is~~El~~~L~~-~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~~~~---  606 (900)
T 1qxp_A          532 IDDNFKTLFSKLA-GDDMEISVKELQTILNR-IISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNRI---  606 (900)
T ss_dssp             ---------CCCC-CSSSSCCCSCTTTTTCC----------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHHHHHH---
T ss_pred             HHHHHHHHHHHHc-CCCCcCCHHHHHHHHHH-hhcccccccCCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHH---
Confidence            3788999999999 99999999999999944 554        7889999999999999999999999999876543   


Q ss_pred             cccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC------CHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          341 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       341 ~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~------~~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                               ..++.+|+.||+|++|+|+.+||+.++...|      +++.++..+| |++|.|+|+||+.++..
T Consensus       607 ---------~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~l~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~  670 (900)
T 1qxp_A          607 ---------RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVR  670 (900)
T ss_dssp             ---------HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHHTS-CSSSBCCHHHHHHHHHH
T ss_pred             ---------HHHHHHHHhhCCCCCCeECHHHHHHHHHHhCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHH
Confidence                     3577899999999999999999999998877      3889999999 99999999999998864

>2kyc_A Parvalbumin-3, parvalbumin, thymic CPV3; EF-hand protein, calcium binding protein; NMR {Gallus gallus} PDB: 2kyf_A

Probab=99.55  E-value=1.1e-15  Score=120.36  Aligned_cols=98  Identities=22%  Similarity=0.328  Sum_probs=83.0

Q ss_pred             CCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCC-
Q 014171          301 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK-  379 (429)
Q Consensus       301 ~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~-  379 (429)
                      ++..+++.+++.+++.+|  ++|.|+|+||+..+...    ...    ...++.+|+.||+|++|+|+.+||+.++... 
T Consensus         2 l~~~~~~~e~~~l~~~~d--~~g~i~~~eF~~~~~~~----~~~----~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~   71 (108)
T 2kyc_A            2 LTDILSPSDIAAALRDCQ--APDSFSPKKFFQISGMS----KKS----SSQLKEIFRILDNDQSGFIEEDELKYFLQRFE   71 (108)
T ss_dssp             TTSSSCHHHHHHHHTTSC--STTTCCHHHHHHHHTCT----TCC----SSSHHHHCSSSCSCCSSCCCGGGTTTSHHHHS
T ss_pred             ccccCCHHHHHHHHHHcC--CCCcCCHHHHHHHHhhC----ccc----HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHh
Confidence            677889999999999998  89999999999876321    111    1247789999999999999999999888765 


Q ss_pred             --C------CHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          380 --G------SIDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       380 --~------~~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                        +      ++..++..+|.|++|.|+|+||+.+|++
T Consensus        72 ~~g~~~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  108 (108)
T 2kyc_A           72 SGARVLTASETKTFLAAADHDGDGKIGAEEFQEMVQS  108 (108)
T ss_dssp             SSCCCCCTTTTHHHHTTTCCSSSSCCCSSHHHHHHHC
T ss_pred             hccCCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHhC
Confidence              3      3899999999999999999999999863

>1bjf_A Neurocalcin delta; calcium-binding, myristoylation, neuronal specific guanylate cyclase activator; 2.40A {Bos taurus} SCOP: a.39.1.5

Probab=99.55  E-value=3.7e-15  Score=129.97  Aligned_cols=123  Identities=21%  Similarity=0.303  Sum_probs=95.6

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhh-------hcccc
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ-------LEEHD  344 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~-------~~~~~  344 (429)
                      .+..+|..+|.|++|.|+..||..++.. ++...+..++..+|..+|.|++|.|+++||..++.....       +...+
T Consensus        64 ~~~~~f~~~D~d~~g~i~~~Ef~~~~~~-~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~~~~~~~~~g~~~~~~~~~  142 (193)
T 1bjf_A           64 FAEHVFRTFDANGDGTIDFREFIIALSV-TSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDE  142 (193)
T ss_dssp             HHHHHHHHHCSSCSSEEEHHHHHHHHHH-HTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGG
T ss_pred             HHHHHHHHhCCCCCCcCcHHHHHHHHHH-HcCCCHHHHHHHHHhhcCCCCCCeECHHHHHHHHHHHHHHhccccCCCccc
Confidence            4677899999999999999999999955 566778889999999999999999999999988765321       11111


Q ss_pred             cHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCCHHHHHHHhCCCCCCcc
Q 014171          345 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRI  397 (429)
Q Consensus       345 ~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~~~~~~~~~d~~~dg~i  397 (429)
                       ......+..+|+.+|+|++|.|+.+||..++....++.+++ .+|.|+||.|
T Consensus       143 -~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~-~~D~~~dG~i  193 (193)
T 1bjf_A          143 -STPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPSIVRLL-QCDPSSAGQF  193 (193)
T ss_dssp             -SSHHHHHHHHHHHSCTTCSSEECHHHHHHHHHHCTHHHHTT-CC--------
T ss_pred             -ccHHHHHHHHHHHhCCCCCCeEeHHHHHHHHhcCHHHHHHh-ccCCCCCCCC
Confidence             01234578899999999999999999999998887899999 9999999986

>2znd_A Programmed cell death protein 6; penta-EF-hand protein, calcium binding protein, apoptosis, calcium, endoplasmic reticulum, membrane, nucleus; 1.70A {Homo sapiens} PDB: 2zn9_A 2zn8_A 1hqv_A 3aak_A 2zne_A 2zrs_A 2zrt_A 3aaj_A

Probab=99.53  E-value=2e-14  Score=123.02  Aligned_cols=123  Identities=15%  Similarity=0.230  Sum_probs=101.3

Q ss_pred             hhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHH
Q 014171          273 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS  352 (429)
Q Consensus       273 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l  352 (429)
                      +..+|..+|.|++|.|+.+||..++..       ..++..+|..+|.|++|.|+.+||..++......   ..   ...+
T Consensus        46 ~~~l~~~~D~~~~g~i~~~ef~~~~~~-------~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~---~~---~~~~  112 (172)
T 2znd_A           46 VRSIISMFDRENKAGVNFSEFTGVWKY-------ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYR---LS---DQFH  112 (172)
T ss_dssp             HHHHHHHHCSSSSSEECHHHHHHHHHH-------HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCC---CC---HHHH
T ss_pred             HHHHHHHhCCCCCCcCCHHHHHHHHHH-------HHHHHHHHHHHCCCCCCccCHHHHHHHHHHcCCC---CC---HHHH
Confidence            445578889999999999999988854       3678899999999999999999999877544211   11   2357


Q ss_pred             HHHhccccCCCCCccCHHHHHhhhcCCCCHHHHHHHhCCCCCCccc--HHHHHHHHHh
Q 014171          353 QAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRIS--LSEFRRLLRT  408 (429)
Q Consensus       353 ~~~F~~~D~~~~G~I~~~el~~~~~~~~~~~~~~~~~d~~~dg~i~--~~ef~~~~~~  408 (429)
                      ..+|+.+|.|++|.|+.+||..++.....+..+|+.+|.|++|.|+  ++||+.++..
T Consensus       113 ~~~~~~~d~~~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~dG~i~~~~~ef~~~~~~  170 (172)
T 2znd_A          113 DILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMVFS  170 (172)
T ss_dssp             HHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHCTTSSSCCCCCHHHHHHHHHT
T ss_pred             HHHHHHhCCCCCCcCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEeeeHHHHHHHHHh
Confidence            7889999999999999999999887776788899999999999995  8999988764

>2d8n_A Recoverin; structural genomics, NPPSFA, national project on protein STR and functional analyses, riken structural genomics/proteomi initiative; 2.20A {Homo sapiens} PDB: 2i94_A 1iku_A* 1jsa_A* 1omr_A 1rec_A 1la3_A* 1omv_A 2het_A

Probab=99.52  E-value=4.1e-14  Score=124.87  Aligned_cols=123  Identities=18%  Similarity=0.243  Sum_probs=103.5

Q ss_pred             ccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCC-CCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhc
Q 014171          279 AIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN-TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFE  357 (429)
Q Consensus       279 ~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~-~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~  357 (429)
                      .++.+++|.|+.+|+..++.. ++  ++..++..+|..+|.+ ++|.|+++||..++.......  ..   ...+..+|+
T Consensus         7 ~mg~~~~g~l~~~el~~~~~~-~~--~~~~~i~~~f~~~d~~~~~G~i~~~ef~~~l~~~~~~~--~~---~~~~~~~f~   78 (207)
T 2d8n_A            7 GMGNSKSGALSKEILEELQLN-TK--FSEEELCSWYQSFLKDCPTGRITQQQFQSIYAKFFPDT--DP---KAYAQHVFR   78 (207)
T ss_dssp             -CTTCCTTCCCHHHHHHHHHH-SS--CCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHTCTTS--CC---HHHHHHHHH
T ss_pred             hhccccCCCCCHHHHHHHHHH-cC--CCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhccCC--Cc---HHHHHHHHH
Confidence            367899999999999999944 65  5889999999999998 799999999998776442211  11   235788999


Q ss_pred             cccCCCCCccCHHHHHhhhcCCC------CHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          358 KFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       358 ~~D~~~~G~I~~~el~~~~~~~~------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                      .+|.|++|.|+.+||..++...+      ++..+|..+|.|++|.|+++||..++...
T Consensus        79 ~~D~d~~G~i~~~Ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~I~~~E~~~~l~~~  136 (207)
T 2d8n_A           79 SFDSNLDGTLDFKEYVIALHMTTAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVMAI  136 (207)
T ss_dssp             HHCTTCCSEEEHHHHHHHHHHHSCSSSSTTHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred             HhcCCCCCeEeHHHHHHHHHHHcCCCHHHHHHHHHHHhcCCCCCeEcHHHHHHHHHHH
Confidence            99999999999999998886543      58999999999999999999999999874

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.52  E-value=3.1e-15  Score=138.82  Aligned_cols=82  Identities=21%  Similarity=0.201  Sum_probs=67.9

Q ss_pred             ccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecc
Q 014171           35 LPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFG  114 (429)
Q Consensus        35 ~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg  114 (429)
                      .....|+|||||+||+|.+ +  .    .  .....++.|++.||.|||++||+||||||+||+++    ++.+||+|||
T Consensus       171 ~~~~~~lvmE~~~g~~L~~-l--~----~--~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~----~~~vkl~DFG  237 (282)
T 1zar_A          171 AWEGNAVLMELIDAKELYR-V--R----V--ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS----EEGIWIIDFP  237 (282)
T ss_dssp             EEETTEEEEECCCCEEGGG-C--C----C--SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE----TTEEEECCCT
T ss_pred             eccceEEEEEecCCCcHHH-c--c----h--hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE----CCcEEEEECC
Confidence            3455689999999999987 4  1    1  23457999999999999999999999999999998    5789999999


Q ss_pred             cceeccCCCcccccccCCccccccccc
Q 014171          115 LSDFIKPGKKFQDIVGSAYYVAPEVLK  141 (429)
Q Consensus       115 ~a~~~~~~~~~~~~~g~~~y~aPE~~~  141 (429)
                      +|..            +..+.|||.+.
T Consensus       238 ~a~~------------~~~~~a~e~l~  252 (282)
T 1zar_A          238 QSVE------------VGEEGWREILE  252 (282)
T ss_dssp             TCEE------------TTSTTHHHHHH
T ss_pred             CCeE------------CCCCCHHHHHH
Confidence            9864            33467888874

>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B

Probab=99.50  E-value=3.6e-14  Score=147.99  Aligned_cols=127  Identities=13%  Similarity=0.173  Sum_probs=96.2

Q ss_pred             Hhhhhcccc--ccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcC-------CCCCcccHHHHHHHHhhhhhh
Q 014171          270 LADLRDQFD--AIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDC-------NTDGLVDFSEFVAATLHVHQL  340 (429)
Q Consensus       270 ~~~l~~~F~--~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~-------~~~g~I~~~eF~~~~~~~~~~  340 (429)
                      ...++++|.  .+|.|++|+|+..|+..+| +.     .+.+++++++.+|.       +++|.|+|+||+.++..... 
T Consensus       145 ~~~Lk~~F~~~~fD~d~dG~Is~~EL~~~l-~~-----~~~ev~~li~~~d~~~~~~D~d~~g~idf~EF~~~~~~l~~-  217 (799)
T 2zkm_X          145 STFLDKILVKLKMQLNSEGKIPVKNFFQMF-PA-----DRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLCP-  217 (799)
T ss_dssp             HHHHHHHHHHHHHSCCTTSCEEHHHHHHHS-CS-----CHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHSC-
T ss_pred             HHHHHHHhHHhccCCCCCCeECHHHHHHHH-hh-----hHHHHHHHHHHhCcCccccccCCCCcCCHHHHHHHHHHccC-
Confidence            456888899  7999999999999999998 32     46899999999985       78899999999988765421 


Q ss_pred             cccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCC-C---------------CHHHHHHHhCCC----CCCcccHH
Q 014171          341 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK-G---------------SIDPLLEEADID----KDGRISLS  400 (429)
Q Consensus       341 ~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~-~---------------~~~~~~~~~d~~----~dg~i~~~  400 (429)
                              ...++.+|+.||++++|+||.+||+++|... |               ++++||+++|.|    ++|.|+|+
T Consensus       218 --------r~el~~aF~~fD~d~~g~Is~~eL~~fL~~~Qge~~~~~~~~~~~t~ee~~~iI~~~d~d~~~~~dg~is~e  289 (799)
T 2zkm_X          218 --------RPEIDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPE  289 (799)
T ss_dssp             --------CHHHHTTCC--------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCHH
T ss_pred             --------HHHHHHHHHHhccCCCCeEcHHHHHHHHHHhcCCcccccccccCCCHHHHHHHHHHhhcccccccCCccchh
Confidence                    1357889999999999999999999998754 2               378899999999    89999999


Q ss_pred             HHHHHHHhccc
Q 014171          401 EFRRLLRTASI  411 (429)
Q Consensus       401 ef~~~~~~~~~  411 (429)
                      ||..+|.+..+
T Consensus       290 eF~~~L~S~~n  300 (799)
T 2zkm_X          290 GMVWFLCGPEN  300 (799)
T ss_dssp             HHHHHHHSTTS
T ss_pred             hhhhcccCccc
Confidence            99999987654

>2i7a_A Calpain 13; calcium-dependent cytoplasmic cysteine proteinases, like, EF-hand, structural genomics, structural genomics CON SGC, hydrolase; 1.80A {Homo sapiens}

Probab=99.49  E-value=4.7e-14  Score=120.94  Aligned_cols=124  Identities=15%  Similarity=0.153  Sum_probs=100.0

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhh-cccccHHHHH
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL-EEHDSEKWHL  350 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~-~~~~~~~~~~  350 (429)
                      +++.+|..+|.|++|.|+.+||..++..       ..++..+|..+| |++|.|+.+||..++...... ...-+   ..
T Consensus        47 ~~~~l~~~~D~d~~G~I~f~EF~~~~~~-------~~~l~~aF~~fD-d~~G~I~~~El~~~l~~l~~~~G~~~~---~~  115 (174)
T 2i7a_A           47 ECRSLVALMELKVNGRLDQEEFARLWKR-------LVHYQHVFQKVQ-TSPGVLLSSDLWKAIENTDFLRGIFIS---RE  115 (174)
T ss_dssp             HHHHHHHHHCSSCSSEECHHHHHHHHHH-------HHHHHHHHHHHC-SBTTBEEGGGHHHHHHTCGGGTTCCCC---HH
T ss_pred             HHHHHHHHHCCCCCCcCCHHHHHHHHHH-------HHHHHHHHHHhc-CCCCcCCHHHHHHHHHHhHhccCCCCC---HH
Confidence            4566788899999999999999988854       267899999999 999999999999887654110 01111   23


Q ss_pred             HHHHHhccccCCCCCccCHHHHHhhhcCCCCHHHHHHHhCCCCCC-cccHHHHHHHHH
Q 014171          351 RSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDG-RISLSEFRRLLR  407 (429)
Q Consensus       351 ~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~~~~~~~~~d~~~dg-~i~~~ef~~~~~  407 (429)
                      .+..+++.+| |++|.|+.+||..++.....+.++|+.+|.|++| .++++||+.++.
T Consensus       116 ~~~~l~~~~d-d~dG~I~~~EF~~~~~~~~~~~~~F~~~D~d~~GI~~~~~Ef~~~~~  172 (174)
T 2i7a_A          116 LLHLVTLRYS-DSVGRVSFPSLVCFLMRLEAMAKTFRNLSKDGKGLYLTEMEWMSLVM  172 (174)
T ss_dssp             HHHHHHHHHS-CTTSEECHHHHHHHHHHHHHHHHHHHHHCSSSSCCCCCHHHHHHHHH
T ss_pred             HHHHHHHHHc-CCCCeEcHHHHHHHHHHHHHHHHHHHHhCCCCCCceecHHHHHHHHH
Confidence            5677889999 9999999999999887776688899999999999 459999998753

>3sjs_A URE3-BP sequence specific DNA binding protein; EF-hand, structural genomics, seattle S genomics center for infectious disease, ssgcid; 1.90A {Entamoeba histolytica} PDB: 3sia_A 3sib_A

Probab=99.47  E-value=5.3e-14  Score=125.58  Aligned_cols=123  Identities=12%  Similarity=0.065  Sum_probs=102.4

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHH
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR  351 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~  351 (429)
                      ++..+|+.+|.|++|.|+.+||..++..       ..++..+|..+|.|++|.|+.+||..++......   -+   ...
T Consensus        88 ~~~~l~~~~D~d~dg~I~~~EF~~~~~~-------~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~---~~---~~~  154 (220)
T 3sjs_A           88 TALRMMRIFDTDFNGHISFYEFMAMYKF-------MELAYNLFVMNARARSGTLEPHEILPALQQLGFY---IN---QRT  154 (220)
T ss_dssp             HHHHHHHHHCTTCSSCBCHHHHHHHHHH-------HHHHHHHHHHHCCSSTTEECHHHHHHHHHHHTCC---CC---HHH
T ss_pred             HHHHHHHHhCCCCCCcCCHHHHHHHHHH-------HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhCCC---CC---HHH
Confidence            3556688889999999999999999854       2678999999999999999999999877643221   11   235


Q ss_pred             HHHHhccccCCCCCccCHHHHHhhhcCCCCHHHHHHHh-CCCCCC------cccHHHHHHHHHh
Q 014171          352 SQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEA-DIDKDG------RISLSEFRRLLRT  408 (429)
Q Consensus       352 l~~~F~~~D~~~~G~I~~~el~~~~~~~~~~~~~~~~~-d~~~dg------~i~~~ef~~~~~~  408 (429)
                      +..+|+.+| |++|.|+.+||.+++.....+..+|+.+ |.+++|      .|+|+||+.++.+
T Consensus       155 ~~~l~~~~d-d~dg~I~~~eF~~~~~~l~~~~~~F~~~~D~~~~G~i~~~~~i~~~ef~~~~~~  217 (220)
T 3sjs_A          155 SLLLHRLFA-RGMAFCDLNCWIAICAFAAQTRSAYQMIFMNPYYGPMKPFNPMEFGKFLDVVTS  217 (220)
T ss_dssp             HHHHHHHHC---CCSEEHHHHHHHHHHHHHHHHHHHHHHTSGGGCSCCCCCHHHHHHHHHHHHH
T ss_pred             HHHHHHHhc-CCCCcCcHHHHHHHHHHHHHHHHHHHHhcccCCCCCcccccceeHHHHHHHHHH
Confidence            678899999 9999999999999998887789999999 999999      8999999998865

>1qxp_A MU-like calpain; M-calpain, MU-calpain, catalytic triad, Ca(2+) requirement, hydrolase chimera; 2.80A {Rattus norvegicus} SCOP: a.39.1.8 a.39.1.8 b.14.1.1 d.3.1.3

Probab=99.46  E-value=1.9e-13  Score=146.57  Aligned_cols=136  Identities=22%  Similarity=0.306  Sum_probs=105.9

Q ss_pred             HhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhc-------c
Q 014171          270 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE-------E  342 (429)
Q Consensus       270 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~-------~  342 (429)
                      +.+++.+|+.+|.|++|+|+.+||..++.. +|..+++.+++.++..+| |++|.|+|+||+..+.....+.       .
T Consensus       606 ~~~l~~~F~~~D~d~~G~Is~~El~~~l~~-~g~~l~~~~~~~l~~~~d-d~dg~I~~~eF~~~~~~~~~l~~~F~~~D~  683 (900)
T 1qxp_A          606 IRNYLTIFRKFDLDKSGSMSAYEMRMAIEA-AGFKLPCQLHQVIVARFA-DDELIIDFDNFVRCLVRLEILFKIFKQLDP  683 (900)
T ss_dssp             HHHHHHHHGGGCTTCCSCCBHHHHHHHHHH-TTEECCHHHHHHHHHHTS-CSSSBCCHHHHHHHHHHHHHHHHHHHHSCS
T ss_pred             HHHHHHHHHhhCCCCCCeECHHHHHHHHHH-hCCCCCHHHHHHHHHHhC-CCCCeEcHHHHHHHHHHHHHHHHHHHhhCC
Confidence            367899999999999999999999999954 899999999999999999 9999999999998765431100       0


Q ss_pred             -c---------------------------------------ccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC--
Q 014171          343 -H---------------------------------------DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG--  380 (429)
Q Consensus       343 -~---------------------------------------~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~--  380 (429)
                       .                                       ........++.+|+.+|.+ +|.|+.+||++++...+  
T Consensus       684 d~~G~It~~~~efl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~-~G~Is~~El~~~L~~~~~~  762 (900)
T 1qxp_A          684 ENTGTIQLDLISWLSFSVLGKLAAAIEHHHHHHMHYSNIEANESEEERQFRKLFVQLAGD-DMEVSATELMNILNKVVTR  762 (900)
T ss_dssp             SCCSCEEEEHHHHHHHTCC--------------CCCCCC--------------CCCCTTC-SSCBCHHHHTTTSCC----
T ss_pred             CCCceEEecHHHHHHHhhhccccccccccccccccccCCCCCChHHHHHHHHHHHHhcCC-CCccCHHHHHHHHHHhccc
Confidence             0                                       0011234577889999987 89999999999988754  


Q ss_pred             ------------CHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          381 ------------SIDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       381 ------------~~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                                  .++.++..+|.|+||.|+|+||..++..
T Consensus       763 ~~~~~~~~~s~~~~~~l~~~~D~d~dG~Is~~EF~~l~~~  802 (900)
T 1qxp_A          763 HPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNN  802 (900)
T ss_dssp             CCSCC--CCCHHHHHHHHHHHCCSSSSSBCSHHHHHHHHH
T ss_pred             ccccccCCCCHHHHHHHHHHHCCCCCCeECHHHHHHHHHH
Confidence                        2788999999999999999999999865

>1alv_A Calpain, S-camld; calcium binding, calmodulin like, domain of cystein protease; 1.90A {Sus scrofa} SCOP: a.39.1.8 PDB: 1alw_A* 1nx0_A 1nx1_A 1nx2_A 1nx3_A* 1kfu_S 1kfx_S 3bow_B 1u5i_B 1df0_B 3df0_B 1aj5_A 1dvi_A 1np8_A

Probab=99.44  E-value=3e-13  Score=115.76  Aligned_cols=121  Identities=16%  Similarity=0.205  Sum_probs=99.6

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHH
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR  351 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~  351 (429)
                      .+..+|..+|.|++|.|+.+||..++..       ..++..+|..+|.|++|.|+.+||..++......   .+   ...
T Consensus        48 ~~~~l~~~~D~~~~g~i~~~eF~~~~~~-------~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~---~~---~~~  114 (173)
T 1alv_A           48 TCRSMVAVMDSDTTGKLGFEEFKYLWNN-------IKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFH---LN---EHL  114 (173)
T ss_dssp             HHHHHHHHHCTTCSSSBCHHHHHHHHHH-------HHHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCC---CC---HHH
T ss_pred             HHHHHHHHHcCCCCCccCHHHHHHHHHH-------HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHcCCC---CC---HHH
Confidence            4566688899999999999999998854       3688999999999999999999999877544221   11   135


Q ss_pred             HHHHhccccCCCCCccCHHHHHhhhcCCCCHHHHHHHhCCCCCCcccHHHHHHHHH
Q 014171          352 SQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR  407 (429)
Q Consensus       352 l~~~F~~~D~~~~G~I~~~el~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~  407 (429)
                      +..+|+.+| |++|.|+.+||..++.....+..+|+.+|.|++|.|+.+ |.+++.
T Consensus       115 ~~~~~~~~d-d~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~i~~~-~~~~l~  168 (173)
T 1alv_A          115 YSMIIRRYS-DEGGNMDFDNFISCLVRLDAMFRAFKSLDKDGTGQIQVN-IQEWLQ  168 (173)
T ss_dssp             HHHHHHHHT-CSSSCBCHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEE-HHHHHH
T ss_pred             HHHHHHHhc-CCCCcCcHHHHHHHHHHHHHHHHHHHHhCCCCCCeecHh-HHHHHH
Confidence            677888899 999999999999998877778999999999999999866 655554

>2l2e_A Calcium-binding protein NCS-1; NCS1P, myristoylated, metal binding protein; HET: MYR; NMR {Schizosaccharomyces pombe}

Probab=99.40  E-value=7.6e-13  Score=114.89  Aligned_cols=118  Identities=16%  Similarity=0.288  Sum_probs=98.9

Q ss_pred             CCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCC-CCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccC
Q 014171          283 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN-TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDI  361 (429)
Q Consensus       283 ~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~-~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~  361 (429)
                      +.+|.|+.+++..+... ++  ++..++.++|..+|.+ ++|.|+++||..++........  .   ...+..+|+.+|.
T Consensus         3 ~~~~~l~~~el~~~~~~-~~--~~~~el~~~f~~~D~~~~~G~i~~~e~~~~l~~~~~~~~--~---~~~~~~~f~~~D~   74 (190)
T 2l2e_A            3 KSQSKLSQDQLQDLVRS-TR--FDKKELQQWYKGFFKDCPSGHLNKSEFQKIYKQFFPFGD--P---SAFAEYVFNVFDA   74 (190)
T ss_dssp             CSSCCSCHHHHHHHHHH-HC--SCSHHHHHHHHHHHHHSCCCEECHHHHHHHHHHHCCCSC--H---HHHHHHHHHHHCS
T ss_pred             cccccCCHHHHHHHHHh-cC--CCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCC--c---cHHHHHHHHHhcC
Confidence            45789999999988844 44  5788999999999999 8999999999987754422111  1   2357889999999


Q ss_pred             CCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          362 DRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       362 ~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                      |++|.|+.+||..++...+.      +..+|..+|.|++|.|+++||..++..
T Consensus        75 d~~G~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~  127 (190)
T 2l2e_A           75 DKNGYIDFKEFICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDA  127 (190)
T ss_dssp             SSTTCEEHHHHHHHHTTSSCSCSHHHHHHHHHHHCTTSCSCBCHHHHHHHHHH
T ss_pred             CCCCeEeHHHHHHHHHHHcCCCHHHHHHHHHhHccCCCCCcCcHHHHHHHHHH
Confidence            99999999999999987753      788999999999999999999999977

>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}

Probab=99.40  E-value=1.5e-13  Score=106.07  Aligned_cols=71  Identities=35%  Similarity=0.576  Sum_probs=65.8

Q ss_pred             cccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHH
Q 014171          263 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAAT  334 (429)
Q Consensus       263 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~  334 (429)
                      ..+++++.++++++|+.+|.|++|+|+.+||..+|.. +|..+++.+++++++.+|.|++|.|+|+||+.+|
T Consensus        28 ~~l~~~~~~el~~~F~~~D~d~~G~I~~~El~~~l~~-lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m   98 (100)
T 2lv7_A           28 VDIPEDELEEIREAFKVFDRDGNGFISKQELGTAMRS-LGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLL   98 (100)
T ss_dssp             CCCCGGGHHHHHHHHHHTCSSCSSCBCHHHHHHHHHH-HTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHT
T ss_pred             ccCCHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHH-hCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHh
Confidence            3567888999999999999999999999999999954 8999999999999999999999999999999764

>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C

Probab=99.39  E-value=1.6e-13  Score=113.69  Aligned_cols=96  Identities=18%  Similarity=0.199  Sum_probs=47.0

Q ss_pred             HHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC----------
Q 014171          311 LEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----------  380 (429)
Q Consensus       311 ~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~----------  380 (429)
                      ..+|..+|.|++|.|+|+||+..+......... .....+.++.+|+.||+|++|+|+.+||+.++...+          
T Consensus        30 ~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~-~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~  108 (143)
T 3a4u_B           30 FSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEA-EMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPL  108 (143)
T ss_dssp             ----------------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHTCC-------------
T ss_pred             HHHHHHhCCCCCCcCcHHHHHHHHHHHhccccc-ccCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCCC
Confidence            346667777777777777776655433211000 001134678899999999999999999999998762          


Q ss_pred             ----CH----HHHHHHhCCCCCCcccHHHHHHHHH
Q 014171          381 ----SI----DPLLEEADIDKDGRISLSEFRRLLR  407 (429)
Q Consensus       381 ----~~----~~~~~~~d~~~dg~i~~~ef~~~~~  407 (429)
                          ++    +.+|..+|.|+||.|+|+||+.+|.
T Consensus       109 ~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~  143 (143)
T 3a4u_B          109 MSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSLQ  143 (143)
T ss_dssp             CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC---
T ss_pred             CCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHHC
Confidence                13    4555999999999999999998763

>1fpw_A Yeast frequenin, calcium-binding protein NCS-1; EF-hand, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2ju0_A

Probab=99.37  E-value=1.1e-12  Score=113.88  Aligned_cols=118  Identities=26%  Similarity=0.351  Sum_probs=96.8

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcc------ccc
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE------HDS  345 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~------~~~  345 (429)
                      .+..+|..+|.|++|.|+.+||..++.. ++...+..++..+|..+|.|++|.|+++||..++........      ...
T Consensus        64 ~~~~~f~~~D~d~~G~i~~~ef~~~~~~-~~~~~~~~~~~~~f~~~D~d~~G~i~~~ef~~~~~~~~~~~g~~~~~~~~~  142 (190)
T 1fpw_A           64 FANHLFTVFDKDNNGFIHFEEFITVLST-TSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDE  142 (190)
T ss_dssp             HHHHHHHTCCSSCSSEECHHHHHHHHHH-HSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCC
T ss_pred             HHHHHHHHHCCCCCCcEeHHHHHHHHHH-HccCCcHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHHHhccccCccccc
Confidence            4677899999999999999999999955 666778899999999999999999999999988765321110      000


Q ss_pred             HHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCCHHHHHHHhC
Q 014171          346 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEAD  390 (429)
Q Consensus       346 ~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~~~~~~~~~d  390 (429)
                      ......+..+|+.+|.|++|.|+.+||..++.....+..++..+|
T Consensus       143 ~~~~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~~d  187 (190)
T 1fpw_A          143 ATPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDPSIIGALNLYD  187 (190)
T ss_dssp             CCHHHHHHHHHHHHTTTCSSEEEHHHHHHHHHSSTTHHHHHHHHH
T ss_pred             chHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhChHHHHHHhhcc
Confidence            111346788999999999999999999999999888888888766

>1k94_A Grancalcin; penta-EF-hand protein, calcium binding protein, metal binding protein; 1.70A {Homo sapiens} SCOP: a.39.1.8 PDB: 1k95_A 1f4q_A 1f4o_A

Probab=99.37  E-value=7.4e-13  Score=112.29  Aligned_cols=121  Identities=14%  Similarity=0.180  Sum_probs=96.4

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHH
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR  351 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~  351 (429)
                      ++..+|..+|.|++|.|+.+||..++..       ..++..+|..+|.|++|.|+.+||..++......   ..   ...
T Consensus        41 ~~~~l~~~~D~~~~g~i~~~eF~~~~~~-------~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~---~~---~~~  107 (165)
T 1k94_A           41 TCRIMIAMLDRDHTGKMGFNAFKELWAA-------LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYR---LS---PQT  107 (165)
T ss_dssp             HHHHHHHHHCTTCSSCBCHHHHHHHHHH-------HHHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCC---CC---HHH
T ss_pred             HHHHHHHHhCCCCCCcCCHHHHHHHHHH-------HHHHHHHHHHhCCCCCceECHHHHHHHHHHhCCC---CC---HHH
Confidence            4566688899999999999999988854       3678999999999999999999998877543211   11   134


Q ss_pred             HHHHhccccCCCCCccCHHHHHhhhcCCCCHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          352 SQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       352 l~~~F~~~D~~~~G~I~~~el~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                      +..+|+.+  |++|.|+.+||..++.....+..+|+.+|.|++|.|+.+ |.+++..
T Consensus       108 ~~~~~~~~--d~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~i~~~-~~~~l~~  161 (165)
T 1k94_A          108 LTTIVKRY--SKNGRIFFDDYVACCVKLRALTDFFRKRDHLQQGSANFI-YDDFLQG  161 (165)
T ss_dssp             HHHHHHHH--CBTTBCBHHHHHHHHHHHHHHHHHHHTTCTTCCSEEEEE-HHHHHHH
T ss_pred             HHHHHHHh--CCCCeEcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEeee-HHHHHHH
Confidence            56677777  889999999999988877678889999999999999777 6666654

>2r2i_A Guanylyl cyclase-activating protein 1; EF hand, GCAP, guanylate cyclase activating protein, GCAP1, GCAP-1, calcium, lipoprotein, myristate; HET: MYR; 2.00A {Gallus gallus}

Probab=99.37  E-value=2.6e-12  Score=112.37  Aligned_cols=118  Identities=19%  Similarity=0.258  Sum_probs=95.6

Q ss_pred             hHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhc---cc
Q 014171          267 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE---EH  343 (429)
Q Consensus       267 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~---~~  343 (429)
                      ......+..+|..+|.|++|.|+.+||..++.. ++...+..++..+|..+|.|++|.|+++||..++.......   ..
T Consensus        48 ~~~~~~~~~~f~~~D~d~~G~I~~~Ef~~~~~~-~~~~~~~~~~~~~F~~~D~d~~G~I~~~Ef~~~~~~~~~~~~~~~~  126 (198)
T 2r2i_A           48 PSANKYVEQMFETFDFNKDGYIDFMEYVAALSL-VLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEA  126 (198)
T ss_dssp             HHHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHH-HSSCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHTTGGGGSSSC
T ss_pred             cchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHH-HccCchHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHhhcCCCch
Confidence            344456888899999999999999999999965 66677888999999999999999999999998876553221   11


Q ss_pred             ccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCCHHHHHH
Q 014171          344 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLE  387 (429)
Q Consensus       344 ~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~~~~~~~  387 (429)
                      ...  .+.+..+|+.+|.|++|.|+.+||..++....++..++.
T Consensus       127 ~~~--~~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~  168 (198)
T 2r2i_A          127 MTA--EEFTNMVFDKIDINGDGELSLEEFMEGVQKDEVLLDILT  168 (198)
T ss_dssp             CCH--HHHHHHHHHHHCTTCSSEECHHHHHHHHTTCHHHHHHHH
T ss_pred             hhH--HHHHHHHHHHhCCCCCCcCcHHHHHHHHHcCHHHHHHHh
Confidence            111  234778999999999999999999999987766777765

>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}

Probab=99.36  E-value=1.8e-12  Score=102.88  Aligned_cols=107  Identities=17%  Similarity=0.279  Sum_probs=76.7

Q ss_pred             hHHHhhhhccccccCCCCCCcccHHHHHHHHHhh----CCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcc
Q 014171          267 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKD----LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE  342 (429)
Q Consensus       267 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~----~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~  342 (429)
                      +..++.+..+|+.+|.| +|+|+.+||+.+|.+.    +|...++.+++++++.+|.|+||.|+|+||+.++..+...  
T Consensus        11 E~~ie~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~l~~~--   87 (121)
T 4drw_A           11 EHAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLTIA--   87 (121)
T ss_dssp             HHHHHHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHHHHHH--
T ss_pred             HHHHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHH--
Confidence            45578899999999988 8999999999998542    5777888999999999999999999999999887655322  


Q ss_pred             cccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCCHHHHHHHhCCCCC
Q 014171          343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKD  394 (429)
Q Consensus       343 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~~~~~~~~~d~~~d  394 (429)
                               ..+.|....+..+++..         ....+.++|+++|.|||
T Consensus        88 ---------~he~f~~~~k~~~~~~~---------~d~~~~e~~~~~d~~gd  121 (121)
T 4drw_A           88 ---------CNDYFVVHMKQENLYFQ---------GDSTVHEILSKLSLEGD  121 (121)
T ss_dssp             ---------HHHHHTTSCC------------------CCHHHHHHHCCC---
T ss_pred             ---------HHHHHHHHHHHhccCCC---------CchHHHHHHHHhcccCC
Confidence                     22356655554444433         23347888888888775

>1gjy_A Sorcin, CP-22, V19; calcium binding, calcium-binding, phosphorylation; 2.2A {Chinese hamster} SCOP: a.39.1.8

Probab=99.36  E-value=9.3e-13  Score=111.96  Aligned_cols=119  Identities=16%  Similarity=0.192  Sum_probs=95.3

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHH
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR  351 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~  351 (429)
                      ++..+|..+|.|++|.|+.+||..++..       ...+..+|..+|.|++|.|+.+||..++......   ..   ...
T Consensus        43 ~~~~l~~~~D~~~~g~i~~~eF~~~~~~-------~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~---~~---~~~  109 (167)
T 1gjy_A           43 TCRLMVSMLDRDMSGTMGFNEFKELWAV-------LNGWRQHFISFDSDRSGTVDPQELQKALTTMGFR---LN---PQT  109 (167)
T ss_dssp             HHHHHHHHHCTTCCSCBCHHHHHHHHHH-------HHHHHHHHHHHCTTCCSEECHHHHHHHHHTTTCC---CC---HHH
T ss_pred             HHHHHHHHHCCCCCCcCCHHHHHHHHHH-------HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCC---CC---HHH
Confidence            4566688899999999999999998854       3688999999999999999999999877543211   11   134


Q ss_pred             HHHHhccccCCCCCccCHHHHHhhhcCCCCHHHHHHHhCCCCCCcccHH--HHHHH
Q 014171          352 SQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLS--EFRRL  405 (429)
Q Consensus       352 l~~~F~~~D~~~~G~I~~~el~~~~~~~~~~~~~~~~~d~~~dg~i~~~--ef~~~  405 (429)
                      +..+|+.+  |++|.|+.+||..++.....+..+|+.+|.|++|.|+.+  +|+.+
T Consensus       110 ~~~~~~~~--d~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~i~~~~~~~l~~  163 (167)
T 1gjy_A          110 VNSIAKRY--STSGKITFDDYIACCVKLRALTDSFRRRDSAQQGMVNFSYDDFIQC  163 (167)
T ss_dssp             HHHHHHHT--CBTTBEEHHHHHHHHHHHHHHHHHHHHHCTTCCSEEEEEHHHHHHH
T ss_pred             HHHHHHHh--CcCCcCcHHHHHHHHHHHHHHHHHHHHhCCCCCeeEEeeHHHHHHH
Confidence            66677777  889999999999988877778889999999999999865  44443

>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A

Probab=99.35  E-value=2e-12  Score=115.94  Aligned_cols=130  Identities=13%  Similarity=0.206  Sum_probs=97.6

Q ss_pred             HhhhhccccccCC-CCCCcccHHHHHHHHHh-------hCCCCcc-----HHHHHHHHHHhcCCCCCcccHHHHHHHHhh
Q 014171          270 LADLRDQFDAIDV-DKNGSISLEEMRQALAK-------DLPWKLK-----ESRVLEILQAIDCNTDGLVDFSEFVAATLH  336 (429)
Q Consensus       270 ~~~l~~~F~~~D~-~~~G~i~~~el~~~l~~-------~~~~~~~-----~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~  336 (429)
                      +..+.++|+.... .++..++..++..+|+.       ..+....     +.-+..+|+.||.|++|+|+|.||+.+++.
T Consensus        81 l~~~~~~f~~~~l~~~~~~l~~~~l~~~L~~lY~~l~~~~p~~v~~~~~~~~~a~~lf~~FD~~~~G~I~f~ef~~aLs~  160 (261)
T 1eg3_A           81 LSAACDALDQHNLKQNDQPMDILQIINCLTTIYDRLEQEHNNLVNVPLCVDMCLNWLLNVYDTGRTGRIRVLSFKTGIIS  160 (261)
T ss_dssp             HHHHHHHHHHTTCCCTTSEEEHHHHHHHHHHHHHHHHHHSTTTCCHHHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCCCCCCHHHHHHHHHHHHHHHHhhCcCcCCchhhHHHHHHHHHHHccCCCCceEeHHHHHHHHHH
Confidence            3445566666543 34567888888777543       2221111     233466999999999999999999999888


Q ss_pred             hhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcC-------CCC------------HHHHHHHhCCCCCCcc
Q 014171          337 VHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL-------KGS------------IDPLLEEADIDKDGRI  397 (429)
Q Consensus       337 ~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~-------~~~------------~~~~~~~~d~~~dg~i  397 (429)
                      ++....      .++++-+|+.|| |+||+|+++||..+++.       .|+            ++.+|+.+|  +||.|
T Consensus       161 l~rG~l------eeKL~w~F~lyD-D~~G~I~~~El~~il~~i~~i~~~vge~~~~~~~~~e~~v~~~F~~~d--~dg~I  231 (261)
T 1eg3_A          161 LCKAHL------EDKYRYLFKQVA-SSTGFCDQRRLGLLLHDSIQIPRQLGEVASFGGSNIEPSVRSCFQFAN--NKPEI  231 (261)
T ss_dssp             TSSSCH------HHHHHHHHHHHS-CTTSCBCHHHHHHHHHHHHHHHHHTTCGGGGTCSCCHHHHHHHHHHTT--TCSCB
T ss_pred             HcCCCH------HHHHHHHHheee-CCCCCCcHHHHHHHHHHHHHHHHhcCCcccCCCCCHHHHHHHHHHhCC--CCCcC
Confidence            765544      457888999999 99999999999987743       221            788998886  79999


Q ss_pred             cHHHHHHHHHh
Q 014171          398 SLSEFRRLLRT  408 (429)
Q Consensus       398 ~~~ef~~~~~~  408 (429)
                      +.+||++.+++
T Consensus       232 t~~EFl~~~~~  242 (261)
T 1eg3_A          232 EAALFLDWMRL  242 (261)
T ss_dssp             CHHHHHHHHHT
T ss_pred             CHHHHHHHHHh
Confidence            99999999875

>1juo_A Sorcin; calcium-binding proteins, penta-EF-hand, PEF, X-RAY, metal transport; 2.20A {Homo sapiens} SCOP: a.39.1.8 PDB: 2jc2_A

Probab=99.33  E-value=1.7e-12  Score=113.72  Aligned_cols=120  Identities=16%  Similarity=0.199  Sum_probs=91.1

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHH
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR  351 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~  351 (429)
                      ++..+|..+|.|++|.|+.+||..++..       ..++..+|..+|.|++|.|+.+||..++......   ..   ...
T Consensus        74 ~~~~l~~~~D~d~~g~i~~~eF~~~~~~-------~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~---~~---~~~  140 (198)
T 1juo_A           74 TCRLMVSMLDRDMSGTMGFNEFKELWAV-------LNGWRQHFISFDTDRSGTVDPQELQKALTTMGFR---LS---PQA  140 (198)
T ss_dssp             HHHHHHHHHCTTCSSCEEHHHHHHHHHH-------HHHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCC---CC---HHH
T ss_pred             HHHHHHHHhCCCCCCeECHHHHHHHHHH-------HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCC---CC---HHH
Confidence            3556678889999999999999888754       3678888999999999999999998776543211   11   134


Q ss_pred             HHHHhccccCCCCCccCHHHHHhhhcCCCCHHHHHHHhCCCCCCcccH--HHHHHHH
Q 014171          352 SQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISL--SEFRRLL  406 (429)
Q Consensus       352 l~~~F~~~D~~~~G~I~~~el~~~~~~~~~~~~~~~~~d~~~dg~i~~--~ef~~~~  406 (429)
                      +..+|+.+  |++|.|+.+||..++.....+..+|+.+|.|++|.|+.  .+|+.++
T Consensus       141 ~~~l~~~~--d~dg~i~~~eF~~~~~~~~~~~~~F~~~D~d~~G~is~~~~~~l~~~  195 (198)
T 1juo_A          141 VNSIAKRY--STNGKITFDDYIACCVKLRALTDSFRRRDTAQQGVVNFPYDDFIQCV  195 (198)
T ss_dssp             HHHHHHHT--CSSSSEEHHHHHHHHHHHHHHHHHHHHTCTTCCSEEEEEHHHHHHHH
T ss_pred             HHHHHHHh--CCCCeEcHHHHHHHHHHHHHHHHHHHHhCCCCCCeEeecHHHHHHHH
Confidence            56677777  78899999999988877767888889999999998887  5655544

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A

Probab=99.33  E-value=2.6e-12  Score=107.23  Aligned_cols=89  Identities=13%  Similarity=0.273  Sum_probs=70.4

Q ss_pred             hHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccH
Q 014171          267 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE  346 (429)
Q Consensus       267 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~  346 (429)
                      .++..+++.+|..+|.|++|+|+.+||..+|.. +|..+++.+++.++..+|.|++|.|+|+||+.++...   .     
T Consensus        46 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~-~g~~~~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~~---~-----  116 (150)
T 2jjz_A           46 PEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEK-LGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGK---R-----  116 (150)
T ss_dssp             HHHHHHHHHHHTTSCCCTTSSBCHHHHHHHHHH-TTCCCCHHHHHHHHHHHHTTSCSSBCHHHHHHHHHSS---S-----
T ss_pred             HHHHHHHHHHHHHhCCCCcCcCCHHHHHHHHHH-cCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHh---H-----
Confidence            466788999999999999999999999999954 8999999999999999999999999999999877543   1     


Q ss_pred             HHHHHHHHHhccccCCCCCcc
Q 014171          347 KWHLRSQAAFEKFDIDRDGFI  367 (429)
Q Consensus       347 ~~~~~l~~~F~~~D~~~~G~I  367 (429)
                         ..+..+|+.||.|++|.-
T Consensus       117 ---~~i~~aF~~~D~d~~G~~  134 (150)
T 2jjz_A          117 ---SAVLKLVMMFEGKANESS  134 (150)
T ss_dssp             ---CCHHHHHHC---------
T ss_pred             ---HHHHHHHHHHcCCCCCCC
Confidence               136789999999999984

>1wy9_A Allograft inflammatory factor 1; EF-hand, calucium binding, metal binding protein; 2.10A {Mus musculus} PDB: 2g2b_A

Probab=99.32  E-value=2e-12  Score=107.57  Aligned_cols=89  Identities=12%  Similarity=0.261  Sum_probs=74.5

Q ss_pred             hHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccH
Q 014171          267 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE  346 (429)
Q Consensus       267 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~  346 (429)
                      +++..+++.+|..+|.|++|+|+.+||..++.. +|..+++.++..++..+|.|++|.|+|+||+.++...   .     
T Consensus        44 ~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~-~g~~~~~~~~~~l~~~~D~d~dg~I~~~eF~~~~~~~---~-----  114 (147)
T 1wy9_A           44 PSKLEAFKVKYMEFDLNGNGDIDIMSLKRMLEK-LGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGK---R-----  114 (147)
T ss_dssp             HHHHHHHHHHHTTSCCCTTSSEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHCSSCTTEECHHHHHHHHCSS---G-----
T ss_pred             HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHh---H-----
Confidence            577889999999999999999999999999954 8999999999999999999999999999999876533   1     


Q ss_pred             HHHHHHHHHhccccCCCCCcc
Q 014171          347 KWHLRSQAAFEKFDIDRDGFI  367 (429)
Q Consensus       347 ~~~~~l~~~F~~~D~~~~G~I  367 (429)
                         ..+..+|+.||.+++|..
T Consensus       115 ---~~~~~aF~~~D~d~~g~~  132 (147)
T 1wy9_A          115 ---SAILRMILMYEEKNKEHK  132 (147)
T ss_dssp             ---GGGGGGGGGCCCC-----
T ss_pred             ---HHHHHHHHHHccCCCCCC
Confidence               135679999999999984

>1s6c_A KV4 potassium channel-interacting protein kchip1B; EF-hand, transport protein; 2.00A {Rattus norvegicus} SCOP: a.39.1.5 PDB: 2nz0_A 2i2r_E

Probab=99.31  E-value=4.9e-12  Score=109.06  Aligned_cols=119  Identities=19%  Similarity=0.242  Sum_probs=93.1

Q ss_pred             hhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcc------cc
Q 014171          271 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE------HD  344 (429)
Q Consensus       271 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~------~~  344 (429)
                      ..+..+|+.+|.|++|.|+.+||..++.. .+...+..++..+|..+|.|++|.|+++||..++........      -.
T Consensus        56 ~~~~~~f~~~D~d~~g~i~~~Ef~~~~~~-~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~~~~~~~~~g~~~~~~~~  134 (183)
T 1s6c_A           56 TYAHYLFNAFDTTQTGSVKFEDFVTALSI-LLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLK  134 (183)
T ss_dssp             HHHHHHHHHHCTTCSSCEEHHHHHHHHHH-HHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC--------
T ss_pred             HHHHHHHHHhCCCCCCcEeHHHHHHHHHH-HcCCCHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHHHhccccCcCcc
Confidence            34667799999999999999999999964 455667889999999999999999999999988765421100      00


Q ss_pred             cHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCCHHHHHHHhC
Q 014171          345 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEAD  390 (429)
Q Consensus       345 ~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~~~~~~~~~d  390 (429)
                      .......+..+|+.+|.|++|.|+.+||..++.....+...+..+|
T Consensus       135 ~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~~~~~~~~~l~~~d  180 (183)
T 1s6c_A          135 EDTPRQHVDVFFQKMDKNKDGIVTLDEFLESXQEDDNIMRSLQLFQ  180 (183)
T ss_dssp             ---CHHHHHHHHHHHCTTCSSEECHHHHHHHTTSCCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHhcChHHHHHHHHhh
Confidence            0001245788999999999999999999999988776666666554

>2kld_A Polycystin-2; PC2, PKD2, calcium binding domain, EF hand, cytosolic, calcium, coiled coil, disease mutation, glycoprotein, ION transport; NMR {Homo sapiens} PDB: 2kle_A 2kq6_A 2y4q_A

Probab=99.31  E-value=3.6e-13  Score=108.31  Aligned_cols=102  Identities=17%  Similarity=0.207  Sum_probs=52.2

Q ss_pred             hhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHH-----HHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHH
Q 014171          299 KDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA-----ATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR  373 (429)
Q Consensus       299 ~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~-----~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~  373 (429)
                      +.+|.++++.+++.++..+    +|.|+|+||+.     ++.... . ....   ...++++|+.||    |+|+.+||+
T Consensus         3 r~lG~~~t~~ei~~~~~~~----~g~i~f~EF~~~~~~~~~~~~~-~-~~~~---~~~l~~aF~~fD----G~I~~~El~   69 (123)
T 2kld_A            3 TAIGINDTYSEVKSDLAQQ----KAEMELSDLIRKGYHKALVKLK-L-KKNT---VDDISESLRQGG----GKLNFDELR   69 (123)
T ss_dssp             ---------------------------------------------------------CCSCSSTTTT----TCEEHHHHH
T ss_pred             hhcCCCCCHHHHHHHHHHc----CCCccHHHHHhHhHHHHHHHhh-c-ChhH---HHHHHHHHHHhC----CCCCHHHHH
Confidence            4578999999999999876    88999999998     443221 1 1111   234678999999    999999999


Q ss_pred             hhhcCCCC----HHHHHHHhCCCCCCcccHHHHHHHHHhccccC
Q 014171          374 MHTGLKGS----IDPLLEEADIDKDGRISLSEFRRLLRTASISS  413 (429)
Q Consensus       374 ~~~~~~~~----~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~~~  413 (429)
                      .+++..|.    +..++..+|.|+||.|+|+||+.+|.......
T Consensus        70 ~~l~~lG~t~~ei~~~~~~~D~d~dG~I~~~EF~~~~~~~~~~~  113 (123)
T 2kld_A           70 QDLKGKGHTDAEIEAIFTKYDQDGDQELTEHEHQQMRDDLEKER  113 (123)
T ss_dssp             HHTTTCCSSHHHHHHHHHHHSSSSCCEECSHHHHHCSCTTTCCC
T ss_pred             HHHHHhCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHhH
Confidence            99998884    88999999999999999999999997655333

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A

Probab=99.31  E-value=3.2e-12  Score=95.74  Aligned_cols=74  Identities=27%  Similarity=0.438  Sum_probs=64.8

Q ss_pred             hcccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhh
Q 014171          262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV  337 (429)
Q Consensus       262 ~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~  337 (429)
                      ...+++++..+++.+|..+|.|++|+|+.+||..++.. +| .++..++..++..+|.|++|.|+|+||+..+...
T Consensus         2 ~~~~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g-~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~   75 (86)
T 2opo_A            2 AAEDTPQDIADRERIFKRFDTNGDGKISSSELGDALKT-LG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN   75 (86)
T ss_dssp             ----CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHT-TT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred             CccCCHhhHHHHHHHHHHHCCCCCCCcCHHHHHHHHHH-cC-CCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHC
Confidence            45667888999999999999999999999999999954 88 8899999999999999999999999999877544

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=99.30  E-value=6e-13  Score=121.70  Aligned_cols=73  Identities=15%  Similarity=0.208  Sum_probs=59.9

Q ss_pred             ccceeEeeecCC-C----ChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH-HCCCeecCCCCCcEEEeecCCCCCEEE
Q 014171           37 LRKLRRIRLCEG-G----ELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH-LHGLVHRDMKPENFLFKSAKEDSSLKA  110 (429)
Q Consensus        37 ~~~~lv~e~~~g-g----~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH-~~~i~H~dikp~Nil~~~~~~~~~~kL  110 (429)
                      ...++|||||.+ |    +|.+....     .++..+..++.|++.||.||| ++||+||||||+|||++    . .++|
T Consensus       141 ~~~~lVmE~~g~~g~~~~~L~~~~~~-----~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp~NILl~----~-~~~l  210 (258)
T 1zth_A          141 MKNVLLMEFIGEDELPAPTLVELGRE-----LKELDVEGIFNDVVENVKRLYQEAELVHADLSEYNIMYI----D-KVYF  210 (258)
T ss_dssp             ETTEEEEECCEETTEECCBHHHHGGG-----GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCSTTSEEES----S-SEEE
T ss_pred             CCCEEEEEecCCCCCccccHHHHhhc-----cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEEc----C-cEEE
Confidence            456899999942 4    66654421     345678899999999999999 99999999999999998    3 8999


Q ss_pred             eecccceec
Q 014171          111 TDFGLSDFI  119 (429)
Q Consensus       111 ~Dfg~a~~~  119 (429)
                      +|||+|...
T Consensus       211 iDFG~a~~~  219 (258)
T 1zth_A          211 IDMGQAVTL  219 (258)
T ss_dssp             CCCTTCEET
T ss_pred             EECcccccC
Confidence            999999764

>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}

Probab=99.28  E-value=3e-12  Score=98.76  Aligned_cols=59  Identities=32%  Similarity=0.571  Sum_probs=54.4

Q ss_pred             HHHHHHHhccccCCCCCccCHHHHHhhhcCCC------CHHHHHHHhCCCCCCcccHHHHHHHHH
Q 014171          349 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR  407 (429)
Q Consensus       349 ~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~------~~~~~~~~~d~~~dg~i~~~ef~~~~~  407 (429)
                      ..+++++|+.||+|++|+|+.+||+.+++.+|      +++.+++.+|.|+||.|+|+||+++|.
T Consensus        35 ~~el~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~ei~~l~~~~D~d~dG~I~~~EF~~~m~   99 (100)
T 2lv7_A           35 LEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTLLG   99 (100)
T ss_dssp             HHHHHHHHHHTCSSCSSCBCHHHHHHHHHHHTCCCCTTTHHHHHHHHCSSCSSSBCHHHHHHHTC
T ss_pred             HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCeEeHHHHHHHhC
Confidence            45689999999999999999999999998776      499999999999999999999999874

>3dd4_A KV channel-interacting protein 4; EF-hands protein, ION transport, ionic channel, membrane, PO potassium channel, potassium transport, transport; 3.00A {Mus musculus} PDB: 2e6w_A

Probab=99.27  E-value=9e-12  Score=111.72  Aligned_cols=119  Identities=19%  Similarity=0.257  Sum_probs=93.7

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhccc------cc
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH------DS  345 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~------~~  345 (429)
                      .+..+|+.+|.|++|.|+.+||..++.. +......+.+..+|+.+|.|++|.|+++||..++.........      ..
T Consensus       103 ~~~~lf~~~D~d~~G~I~~~Ef~~~l~~-~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~~~~~  181 (229)
T 3dd4_A          103 YAHFLFNAFDTDHNGAVSFEDFIKGLSI-LLRGTVQEKLNWAFNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKE  181 (229)
T ss_dssp             HHHHHHHTTCSSCCSSCCHHHHHHHHHH-HHHSCHHHHHHHHHHHHCTTCSSCCBHHHHHHHHHHHHHHCC---------
T ss_pred             HHHHHHHHcCCCCCCeEeHHHHHHHHHH-HcCCChHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHHHHhccccCCCcch
Confidence            4667799999999999999999999865 4445567889999999999999999999999887654211000      00


Q ss_pred             HHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCCHHHHHHHhCC
Q 014171          346 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADI  391 (429)
Q Consensus       346 ~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~~~~~~~~~d~  391 (429)
                      ......+..+|+.+|.|+||.|+.+||..++.....+..++..+|.
T Consensus       182 ~~~~~~~~~~f~~~D~d~dG~Is~~EF~~~~~~~~~~~~~~~~~D~  227 (229)
T 3dd4_A          182 DAPRQHVETFFQKMDKNKDGVVTIDEFIESCQKDENIMRSMQLFEN  227 (229)
T ss_dssp             --CCTHHHHHHHHHCSSCSSBCCHHHHHHHHHTCHHHHHHHHHHTT
T ss_pred             hhHHHHHHHHHHHhcCCCCCcEeHHHHHHHHHhCHHHHHHHHhccc
Confidence            0001357789999999999999999999999988778888887773

>2ehb_A Calcineurin B-like protein 4; protein complex, Ca(II) IONS bound to SOS3 (EF-hands 1 and 4 FISL motif; 2.10A {Arabidopsis thaliana} PDB: 1v1g_A 1v1f_A

Probab=99.27  E-value=5e-12  Score=111.38  Aligned_cols=131  Identities=21%  Similarity=0.214  Sum_probs=93.7

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhh-hhc-ccccHHHH
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVH-QLE-EHDSEKWH  349 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~-~~~-~~~~~~~~  349 (429)
                      .+.++|..+|.|++|.|+.+||..++...........++..+|..+|.|++|.|+++||..++.... ... .....+..
T Consensus        75 ~~~~~f~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~~  154 (207)
T 2ehb_A           75 FADRIFDVFDVKRNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIE  154 (207)
T ss_dssp             HHHHHHHHHCTTCSSEECHHHHHHHHGGGSTTSCHHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHHHHHTCCCCHHHHH
T ss_pred             HHHHHHHHhcCCCCCeEeHHHHHHHHHHHccCCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHcccccCHHHHH
Confidence            3456799999999999999999999965333345677899999999999999999999998775321 111 11122223


Q ss_pred             HHHHHHhccccCCCCCccCHHHHHhhhcCCCCHHHHHHHhCCCCCCcccHHHHH
Q 014171          350 LRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFR  403 (429)
Q Consensus       350 ~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~  403 (429)
                      ..+..+|+.+|.|++|.|+.+||..++.....+...+.. ..-++..++|.+|+
T Consensus       155 ~~~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~-~~~~~~~~~f~~~~  207 (207)
T 2ehb_A          155 VMVDKAFVQADRKNDGKIDIDEWKDFVSLNPSLIKNMTL-PYLKDINRTFPSFV  207 (207)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHCGGGGGGGCC-TTTTSTTTC-----
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHhChHHHHHhcc-hhhhhhhhcCcCcC
Confidence            446789999999999999999999998776544333322 33568889998885

>1jba_A GCAP-2, protein (guanylate cyclase activating protein 2); EF-hand, calcium-binding protein, guanylyl cyclase regulation, lyase; NMR {Bos taurus} SCOP: a.39.1.5

Probab=99.27  E-value=2.3e-11  Score=106.85  Aligned_cols=117  Identities=16%  Similarity=0.153  Sum_probs=94.4

Q ss_pred             hhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcc----c---
Q 014171          271 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE----H---  343 (429)
Q Consensus       271 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~----~---  343 (429)
                      ..+..+|..+|.|++|.|+.+||..++.. ++...+..++..+|..+|.|++|.|+++||..++........    .   
T Consensus        59 ~~~~~~f~~~D~d~~G~i~~~Ef~~~~~~-~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~~~~~g~~~~~~~~  137 (204)
T 1jba_A           59 QYVEAMFRAFDTNGDNTIDFLEYVAALNL-VLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEA  137 (204)
T ss_dssp             HHHHHHHHHHCCSSSSEECHHHHHHHHHH-HSSCCCTHHHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTS
T ss_pred             HHHHHHHHHHcCCCCCeEeHHHHHHHHHH-HccCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCccccc
Confidence            45667799999999999999999999965 566677889999999999999999999999988765532110    0   


Q ss_pred             ----ccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCCHHHHHHH
Q 014171          344 ----DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEE  388 (429)
Q Consensus       344 ----~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~~~~~~~~  388 (429)
                          ........+..+|+.+|.|++|.|+.+||..++....++..++..
T Consensus       138 ~~~g~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~  186 (204)
T 1jba_A          138 EQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARRDKWVMKMLQM  186 (204)
T ss_dssp             STTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHTTTTTHHHHHHS
T ss_pred             cccCchhhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHcChHHHHHHHh
Confidence                000113457889999999999999999999999988888887763

>2jul_A Calsenilin; EF-hand, calcium, LXXLL, DNA binding protein, dimer, alternative splicing, apoptosis, cytoplasm, endoplasmic reticulum, golgi apparatus; NMR {Mus musculus}

Probab=99.27  E-value=1.8e-11  Score=111.75  Aligned_cols=119  Identities=20%  Similarity=0.228  Sum_probs=95.2

Q ss_pred             hhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcc------cc
Q 014171          271 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE------HD  344 (429)
Q Consensus       271 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~------~~  344 (429)
                      ..+..+|..+|.|++|.|+.+||..++.. ++...+.+++..+|..+|.|++|.|+++||..++........      ..
T Consensus       129 ~~~~~~f~~~D~d~dG~I~~~Ef~~~l~~-~~~~~~~~~l~~~F~~~D~d~dG~I~~~Ef~~~l~~~~~~~g~~~~~~~~  207 (256)
T 2jul_A          129 TYAHFLFNAFDADGNGAIHFEDFVVGLSI-LLRGTVHEKLKWAFNLYDINKDGCITKEEMLAIMKSIYDMMGRHTYPILR  207 (256)
T ss_dssp             HHHHHHHHHSSCSCCSEECSHHHHHHHHH-HHSCCHHHHHHHHHHHTCCSSSSCBCHHHHHHHHHHHHHHCCCCCSCCSC
T ss_pred             HHHHHHHHHhccCCCCcCcHHHHHHHHHH-HhccChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHhCCCCCcccc
Confidence            34677899999999999999999999955 556677889999999999999999999999988765421100      00


Q ss_pred             cHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCCHHHHHHHhC
Q 014171          345 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEAD  390 (429)
Q Consensus       345 ~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~~~~~~~~~d  390 (429)
                      .......+..+|+.+|.|++|.|+.+||..++.....+.+.+..+|
T Consensus       208 ~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~~~~l~~~l~~~d  253 (256)
T 2jul_A          208 EDAPLEHVERFFQKMDRNQDGVVTIDEFLETCQKDENIMNSMQLFE  253 (256)
T ss_dssp             CCCHHHHHHHHHHHSCCSTTCSBCHHHHHHHHHHCSSHHHHHHHHH
T ss_pred             hhhHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhCHHHHHHHHhhc
Confidence            0012356788999999999999999999999988777777777665

>1nya_A Calerythrin; EF-hand, metal binding protein; NMR {Saccharopolyspora erythraea} SCOP: a.39.1.5

Probab=99.23  E-value=3.5e-11  Score=102.65  Aligned_cols=99  Identities=20%  Similarity=0.195  Sum_probs=81.0

Q ss_pred             hccccccCCCCCCcccHHHHHHHHHhhCCCCcc-------HHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccH
Q 014171          274 RDQFDAIDVDKNGSISLEEMRQALAKDLPWKLK-------ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE  346 (429)
Q Consensus       274 ~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~-------~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~  346 (429)
                      ..+|..+|.|++|.|+.+||..++.........       ...+..+|..+|.|++|.|+++||..++.... +    + 
T Consensus        61 ~~lf~~~D~d~dg~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g-~----~-  134 (176)
T 1nya_A           61 DYLAKEAGVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALG-M----S-  134 (176)
T ss_dssp             HHHHHHHTSCTTCCBCHHHHHHHHHHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTT-C----C-
T ss_pred             HHHHHHhCCCCCCeEcHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHhC-C----C-
Confidence            378999999999999999999998664333322       35689999999999999999999998776543 1    1 


Q ss_pred             HHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC
Q 014171          347 KWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG  380 (429)
Q Consensus       347 ~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~  380 (429)
                        ...+..+|+.+|.|++|.|+.+||..++....
T Consensus       135 --~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~  166 (176)
T 1nya_A          135 --KAEAAEAFNQVDTNGNGELSLDELLTAVRDFH  166 (176)
T ss_dssp             --HHHHHHHHHHHCTTCSSEEEHHHHHHHHSCCS
T ss_pred             --HHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHh
Confidence              23577899999999999999999999987654

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}

Probab=99.23  E-value=2.3e-11  Score=92.23  Aligned_cols=89  Identities=28%  Similarity=0.478  Sum_probs=72.3

Q ss_pred             cchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccc
Q 014171          265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD  344 (429)
Q Consensus       265 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~  344 (429)
                      .++++..+++.+|..+|.|++|+|+.+||..++.. +|..++..++..++..+|.|++|.|+|+||+..+........  
T Consensus         3 ~~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~~~~~~--   79 (92)
T 2kn2_A            3 MDTDAEEELKEAFKVFDKDQNGYISASELRHVMIN-LGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVRGGGG--   79 (92)
T ss_dssp             CCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH-TTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHHTTTCC--
T ss_pred             CCccHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHH-hCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhccCCCC--
Confidence            34567788999999999999999999999999954 899999999999999999999999999999987765433221  


Q ss_pred             cHHHHHHHHHHhc
Q 014171          345 SEKWHLRSQAAFE  357 (429)
Q Consensus       345 ~~~~~~~l~~~F~  357 (429)
                      ... ...++.||+
T Consensus        80 ~~~-~~~l~~aF~   91 (92)
T 2kn2_A           80 GNG-WSRLRRKFS   91 (92)
T ss_dssp             CHH-HHHHHHHHT
T ss_pred             Cch-HHHHHHHhc
Confidence            111 245677775

>1s1e_A KV channel interacting protein 1; kchip, calcium-binding protein, EF-finger, transport protein; 2.30A {Homo sapiens} SCOP: a.39.1.5

Probab=99.23  E-value=1.2e-11  Score=110.59  Aligned_cols=118  Identities=16%  Similarity=0.200  Sum_probs=90.7

Q ss_pred             CCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCC-CCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCC
Q 014171          284 KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN-TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDID  362 (429)
Q Consensus       284 ~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~-~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~  362 (429)
                      ..+.++.+++..++.. .+  ++..+++.+++.+|.+ ++|.|+++||..++.......  ..   ...+..+|+.+|.|
T Consensus        30 ~~~~l~~~~l~~l~~~-~~--~s~~ei~~l~~~Fd~~d~~G~I~~~E~~~~l~~l~~~~--~~---~~~~~~~f~~~D~d  101 (224)
T 1s1e_A           30 TMVCHRPEGLEQLEAQ-TN--FTKRELQVLYRGFKNECPSGVVNEETFKQIYAQFFPHG--DA---STYAHYLFNAFDTT  101 (224)
T ss_dssp             --------CHHHHHHH-SS--CCHHHHHHHHHHHHHHCTTSCBCHHHHHHHHHTTCTTS--CC---HHHHHHHHHHHCTT
T ss_pred             CccCCCHHHHHHHHHH-cC--CCHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHhcCCC--Cc---HHHHHHHHHHhcCC
Confidence            3578999999988844 44  7889999999999984 999999999998775442211  11   23577899999999


Q ss_pred             CCCccCHHHHHhhhcCCC------CHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          363 RDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       363 ~~G~I~~~el~~~~~~~~------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                      ++|.|+.+||..++...+      ++..+|+.+|.|++|.|+++||..+++..
T Consensus       102 ~~G~I~~~Ef~~~l~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~E~~~~l~~~  154 (224)
T 1s1e_A          102 QTGSVKFEDFVTALSILLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAI  154 (224)
T ss_dssp             CSSCBCHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCCSEECHHHHHHHHHHH
T ss_pred             CCCcEeHHHHHHHHHHHccCCHHHHHHHHHHHHcCCCCCeECHHHHHHHHHHH
Confidence            999999999998886543      37889999999999999999999999764

>1g8i_A Frequenin, neuronal calcium sensor 1; calcium binding-protein, EF-hand, calcium ION, metal binding protein; HET: 1PE P6G; 1.90A {Homo sapiens} SCOP: a.39.1.5 PDB: 2lcp_A

Probab=99.21  E-value=2.2e-11  Score=105.50  Aligned_cols=118  Identities=18%  Similarity=0.233  Sum_probs=96.1

Q ss_pred             CCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCC-CCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCC
Q 014171          284 KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN-TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDID  362 (429)
Q Consensus       284 ~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~-~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~  362 (429)
                      ..+.++.+++..+... .  .++..++..+|..+|.+ ++|.|+++||..++........  .   ...+..+|+.+|.|
T Consensus         4 ~~~~l~~~~l~~l~~~-~--~~~~~~i~~~f~~fd~~~~~G~i~~~e~~~~l~~~~~~~~--~---~~~~~~~f~~~D~d   75 (190)
T 1g8i_A            4 SNSKLKPEVVEELTRK-T--YFTEKEVQQWYKGFIKDCPSGQLDAAGFQKIYKQFFPFGD--P---TKFATFVFNVFDEN   75 (190)
T ss_dssp             CCCSCCHHHHHHHHHT-S--SSCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSC--T---HHHHHHHHHHHCTT
T ss_pred             ccccCCHHHHHHHHHc-c--CCCHHHHHHHHHHHHHhCCCCcCCHHHHHHHHHHhCCCCC--h---HHHHHHHHHHHhcC
Confidence            3467899999888743 3  46789999999999998 8999999999987765421111  1   13478899999999


Q ss_pred             CCCccCHHHHHhhhcCCC------CHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          363 RDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       363 ~~G~I~~~el~~~~~~~~------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                      ++|.|+.+||..++...+      .+..+|..+|.|++|.|+++||..++...
T Consensus        76 ~~g~i~~~ef~~~~~~~~~~~~~~~~~~~f~~~D~d~~G~i~~~e~~~~l~~~  128 (190)
T 1g8i_A           76 KDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAI  128 (190)
T ss_dssp             CSSEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred             CCCeEeHHHHHHHHHHhcCCCHHHHHHHHHHhhcCCCCCeECHHHHHHHHHHH
Confidence            999999999998876553      37889999999999999999999999873

>3a4u_B Multiple coagulation factor deficiency protein 2; lectin, ergic, ER, golgi, transport, disulfide bond, endopla reticulum, ER-golgi transport; 1.84A {Homo sapiens} PDB: 2vrg_A 3lcp_C

Probab=99.20  E-value=1.1e-11  Score=102.50  Aligned_cols=104  Identities=19%  Similarity=0.172  Sum_probs=50.8

Q ss_pred             hhccccccCCCCCCcccHHHHHHHHHhhCC----CCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhh------cc
Q 014171          273 LRDQFDAIDVDKNGSISLEEMRQALAKDLP----WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL------EE  342 (429)
Q Consensus       273 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~----~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~------~~  342 (429)
                      ....|..+|.|++|+|+.+||..++...+.    .....+++..+|..+|.|++|.|+++||..++......      ..
T Consensus        29 ~~~~f~~~D~d~dG~I~~~Ef~~~l~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~g~~  108 (143)
T 3a4u_B           29 SFSQPGSMGLDKNTVHDQEHIMEHLEGVINKPEAEMSPQELQLHYFKMHDYDGNNLLDGLELSTAITHVHKEEGSEQAPL  108 (143)
T ss_dssp             ----------------------------------CCCHHHHHHHHHHHTCTTCSSCEEHHHHHHTCC-------------
T ss_pred             CHHHHHHhCCCCCCcCcHHHHHHHHHHHhcccccccCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHHhhhccccCCC
Confidence            456799999999999999999999865322    12345678999999999999999999999866543210      01


Q ss_pred             cccHHHHHHHHHHhccccCCCCCccCHHHHHhhh
Q 014171          343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHT  376 (429)
Q Consensus       343 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~  376 (429)
                      ....+....+..+|+.+|.|++|.|+.+||..++
T Consensus       109 ~s~~e~~~~~~~~f~~~D~d~dG~Is~~EF~~~~  142 (143)
T 3a4u_B          109 MSEDELINIIDGVLRDDDKNNDGYIDYAEFAKSL  142 (143)
T ss_dssp             CCHHHHHHHHHHHHHHHCTTCSSEECHHHHHC--
T ss_pred             CCHHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHH
Confidence            1112223345678899999999999999998765

>1jfj_A Ehcabp, calcium-binding protein; EF-hand, helix-loop-helix, metal binding protein; NMR {Entamoeba histolytica} SCOP: a.39.1.5 PDB: 1jfk_A 2nxq_A 3px1_A 3qjk_A 2jnx_A 2i18_A

Probab=99.19  E-value=5.1e-11  Score=96.54  Aligned_cols=94  Identities=23%  Similarity=0.384  Sum_probs=78.0

Q ss_pred             HHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcC---CC------
Q 014171          310 VLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL---KG------  380 (429)
Q Consensus       310 ~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~---~~------  380 (429)
                      +.++|..+|.+++|.|+++||..++......   ..   ...+..+|+.+|.|++|.|+.+||..++..   ..      
T Consensus         2 l~~~F~~~D~~~~g~i~~~e~~~~l~~~~~~---~~---~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~   75 (134)
T 1jfj_A            2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAI---KN---EQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKI   75 (134)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCS---SH---HHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHH
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHHcCCC---CC---HHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhcccccCCCHH
Confidence            6789999999999999999999876543211   11   245788999999999999999999999852   22      


Q ss_pred             CHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          381 SIDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       381 ~~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                      ++..+|..+|.|++|.|+++||..+++..
T Consensus        76 ~~~~~f~~~D~d~~G~i~~~e~~~~l~~~  104 (134)
T 1jfj_A           76 GLKVLYKLMDVDGDGKLTKEEVTSFFKKH  104 (134)
T ss_dssp             HHHHHHHHHCCSSSSEEEHHHHHHHHTTT
T ss_pred             HHHHHHHHHCCCCCCccCHHHHHHHHHHh
Confidence            27889999999999999999999999754

>3h4s_E KCBP interacting Ca2+-binding protein; kinesin, motor protein, regulation, complex, calcium, EF- hand, calmodulin, ATP-binding, microtubule; HET: ADP; 2.40A {Arabidopsis thaliana}

Probab=99.19  E-value=1.5e-11  Score=100.71  Aligned_cols=102  Identities=13%  Similarity=0.044  Sum_probs=60.9

Q ss_pred             hhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHH
Q 014171          273 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS  352 (429)
Q Consensus       273 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l  352 (429)
                      .+++|..+|.|++|.|+.+||..++...........++..+|..+|.|++|.|+.+||..++.....  ..-.   ...+
T Consensus         5 ~~~l~~~~D~d~~G~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~--~~~~---~~e~   79 (135)
T 3h4s_E            5 EKSMLLETTSTTKMETKYEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGI--EGMS---KEDA   79 (135)
T ss_dssp             --------------CCCC-----------CHHHHHHHHHHHHHHHSBTTTTBBCHHHHHHHGGGGTC--CCCC---HHHH
T ss_pred             HHHHHHHHcCCCCCcEeHHHHHHHHHHHccccchHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCC--CCCC---HHHH
Confidence            4678999999999999999999988654443445678999999999999999999999987654321  0111   2357


Q ss_pred             HHHhccccCCCCCccCHHHHHhhhcCC
Q 014171          353 QAAFEKFDIDRDGFITPEELRMHTGLK  379 (429)
Q Consensus       353 ~~~F~~~D~~~~G~I~~~el~~~~~~~  379 (429)
                      ..+|+.+|.|++|.|+.+||..++...
T Consensus        80 ~~~~~~~D~d~dG~I~~~EF~~~~~~~  106 (135)
T 3h4s_E           80 QGMVREGDLDGDGALNQTEFCVLMVRL  106 (135)
T ss_dssp             HHHHHHHCSSCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCCCcHHHHHHHHHHh
Confidence            789999999999999999999988655

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A

Probab=99.19  E-value=3e-11  Score=91.25  Aligned_cols=74  Identities=26%  Similarity=0.471  Sum_probs=67.2

Q ss_pred             hhcccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q 014171          261 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL  335 (429)
Q Consensus       261 ~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~  335 (429)
                      +...+++++..+++.+|..+|.|++|+|+.+||..++.. +|..++..++..++..+|.|++|.|+|+||+..+.
T Consensus        10 ~~~~l~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~   83 (90)
T 1avs_A           10 ARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRM-LGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMV   83 (90)
T ss_dssp             HHHHBCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH-TTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHH
T ss_pred             HHHhCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence            344568888999999999999999999999999999954 89999999999999999999999999999998764

>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A

Probab=99.18  E-value=1.9e-11  Score=93.97  Aligned_cols=71  Identities=23%  Similarity=0.375  Sum_probs=62.0

Q ss_pred             hHHHhhhhccccccC-CCCC-CcccHHHHHHHHHhhC----CCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhh
Q 014171          267 DEELADLRDQFDAID-VDKN-GSISLEEMRQALAKDL----PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV  337 (429)
Q Consensus       267 ~~~~~~l~~~F~~~D-~~~~-G~i~~~el~~~l~~~~----~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~  337 (429)
                      +..+.+++++|+.|| .|++ |+|+.+||..+|...+    |..+++.+++++++.+|.|+||.|+|+||+.++...
T Consensus         6 e~~i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~~   82 (101)
T 3nso_A            6 EQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACL   82 (101)
T ss_dssp             HHHHHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            345678999999997 8887 9999999999996544    677889999999999999999999999999877654

>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A

Probab=99.18  E-value=5.8e-11  Score=98.00  Aligned_cols=99  Identities=14%  Similarity=0.264  Sum_probs=77.3

Q ss_pred             hhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHH
Q 014171          273 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS  352 (429)
Q Consensus       273 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l  352 (429)
                      +..+|..+|.|++|.|+.+||..++........+..++...|+.+|.|++|.|+.+||..++......   -+   ...+
T Consensus        44 ~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~---~~---~~~~  117 (143)
T 2obh_A           44 IKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGEN---LT---DEEL  117 (143)
T ss_dssp             HHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCC---CC---HHHH
T ss_pred             HHHHHHHhCCCCCCeeeHHHHHHHHHHHhccccHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCC---CC---HHHH
Confidence            45568888999999999999998875432222235678999999999999999999999877543211   11   2357


Q ss_pred             HHHhccccCCCCCccCHHHHHhhhc
Q 014171          353 QAAFEKFDIDRDGFITPEELRMHTG  377 (429)
Q Consensus       353 ~~~F~~~D~~~~G~I~~~el~~~~~  377 (429)
                      ..+|+.+|.|++|.|+.+||..++.
T Consensus       118 ~~~~~~~D~d~dG~I~~~eF~~~~~  142 (143)
T 2obh_A          118 QEMIDEADRDGDGEVSEQEFLRIMK  142 (143)
T ss_dssp             HHHHHHHCTTSSSSBCHHHHHHHHC
T ss_pred             HHHHHHhCCCCCCcEeHHHHHHHHc
Confidence            7889999999999999999998764

>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}

Probab=99.17  E-value=2.1e-11  Score=127.22  Aligned_cols=126  Identities=15%  Similarity=0.215  Sum_probs=105.7

Q ss_pred             hhhhccccc--cCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCC-------CCCcccHHHHHHHHhhhhhhc
Q 014171          271 ADLRDQFDA--IDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN-------TDGLVDFSEFVAATLHVHQLE  341 (429)
Q Consensus       271 ~~l~~~F~~--~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~-------~~g~I~~~eF~~~~~~~~~~~  341 (429)
                      ..++++|..  +|.|++|.|+..|+..+|..      ...++..+++.+|.+       ++|.|+|+||+..+..+... 
T Consensus       150 ~~L~kaf~~~~~D~n~dGkIs~kel~~~l~~------~~~~v~~l~~~~d~~~~~~d~~~~g~i~feEF~~f~~~l~~R-  222 (885)
T 3ohm_B          150 TFLRKAYTKLKLQVNQDGRIPVKNILKMFSA------DKKRVETALESCGLKFNRSESIRPDEFSLEIFERFLNKLCLR-  222 (885)
T ss_dssp             HHHHHHHHHHHHSCCTTSCEEHHHHHHTTGG------GHHHHHHHHHTTTCCCSTTCEECGGGCCHHHHHHHHHHHSCC-
T ss_pred             HHHHHHHHHhcCccCCCCccCHHHHHHHHhc------CHHHHHHHHHHhCCCccccccCCCCcCCHHHHHHHHHhcCCH-
Confidence            457777887  89999999999999998832      467899999999987       78899999999877644321 


Q ss_pred             ccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC-C---------------HHHHHHHhCCC----CCCcccHHH
Q 014171          342 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-S---------------IDPLLEEADID----KDGRISLSE  401 (429)
Q Consensus       342 ~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~-~---------------~~~~~~~~d~~----~dg~i~~~e  401 (429)
                              ..++.+|+.||.+++|+||.+||+.+|...+ +               +.+||+.++.+    ++|.+++++
T Consensus       223 --------~EI~eiF~~ydsd~~g~mT~~EL~~FL~~~Q~e~~~~e~~~~~~t~e~~~~iI~k~e~~~~~~~~g~Lsldg  294 (885)
T 3ohm_B          223 --------PDIDKILLEIGAKGKPYLTLEQLMDFINQKQRDPRLNEVLYPPLRPSQARLLIEKYEPNQQFLERDQMSMEG  294 (885)
T ss_dssp             --------HHHHHHHHHTTCCSTTCEEHHHHHHHHHHHSSCTTSCTTTSCCCCHHHHHHHHHHHCCCHHHHHTTEECHHH
T ss_pred             --------HHHHHHHHHHhcCCCCccCHHHHHHHHHHhcCcccccccccccCCHHHHHHHHHHhcCChhhhccCccchhh
Confidence                    2478899999999999999999999997653 2               78899999998    799999999


Q ss_pred             HHHHHHhccc
Q 014171          402 FRRLLRTASI  411 (429)
Q Consensus       402 f~~~~~~~~~  411 (429)
                      |..+|....+
T Consensus       295 F~~yL~S~~~  304 (885)
T 3ohm_B          295 FSRYLGGEEN  304 (885)
T ss_dssp             HHHHHTSTTS
T ss_pred             hhhhccCccc
Confidence            9999986553

>3nso_A Protein S100-A3; EF-hand, Ca2+, Zn2+ binding, metal binding protein; 1.45A {Homo sapiens} SCOP: a.39.1.2 PDB: 3nsi_A 1kso_A 3nsk_A 3nsl_A

Probab=99.17  E-value=1.9e-11  Score=93.98  Aligned_cols=62  Identities=16%  Similarity=0.183  Sum_probs=54.6

Q ss_pred             HHHHHHHhcccc-CCCC-CccCHHHHHhhhcC-----CC------CHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          349 HLRSQAAFEKFD-IDRD-GFITPEELRMHTGL-----KG------SIDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       349 ~~~l~~~F~~~D-~~~~-G~I~~~el~~~~~~-----~~------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      ...++++|+.|| +|++ |+|+.+||+.+++.     +|      +++++++++|.|+||.|+|+||+.+|.+..
T Consensus         9 i~~l~~aF~~fd~~dg~~G~Is~~EL~~~l~~~l~~~lg~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~~~~~~   83 (101)
T 3nso_A            9 VAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACLC   83 (101)
T ss_dssp             HHHHHHHHHHHHTTSSCTTEECHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHCCCSCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhcCCCCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence            456889999997 8987 99999999999874     23      289999999999999999999999998765

>3bow_A Calpain-2 catalytic subunit; cysteine protease, inhibitor, cell membrane, hydrolase, MEMB protease, thiol protease, phosphoprotein; 2.40A {Rattus norvegicus} PDB: 3df0_A 1df0_A 1u5i_A 1kfu_L 1kfx_L

Probab=99.17  E-value=2e-11  Score=127.13  Aligned_cols=126  Identities=17%  Similarity=0.148  Sum_probs=105.1

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHH
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR  351 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~  351 (429)
                      ++..+|..+|.|++|.|+.+||..++...       .++..+|..+|.|++|.|+.+||..++.......   .   ...
T Consensus       576 ~~~~l~~~~D~d~~G~I~f~EF~~l~~~~-------~~l~~~F~~~D~d~dG~Is~~El~~~L~~~G~~l---s---~~~  642 (714)
T 3bow_A          576 TCKIMVDMLDEDGSGKLGLKEFYILWTKI-------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKL---P---CQL  642 (714)
T ss_dssp             HHHHHHHHHCCSSCSSBCHHHHHHHHHHH-------HHHHHHHHHHCTTCCSSEEHHHHHHHHHHTTEEC---C---HHH
T ss_pred             HHHHHHHHhCCCCCCcCcHHHHHHHHHHH-------HHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCCC---C---HHH
Confidence            45666888999999999999999998552       7899999999999999999999998775442111   1   235


Q ss_pred             HHHHhccccCCCCCccCHHHHHhhhcCCCCHHHHHHHhCCCCCCcccHHHHHHHHHhccc
Q 014171          352 SQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTASI  411 (429)
Q Consensus       352 l~~~F~~~D~~~~G~I~~~el~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~  411 (429)
                      +..+|+.+| |++|.|+.+||..++.....+.++|+.+|.|++|.|+++|+..++.....
T Consensus       643 ~~~l~~~~D-d~dG~Isf~EF~~~l~~~~~l~~~F~~~D~d~dG~Is~~el~~l~~~~~~  701 (714)
T 3bow_A          643 HQVIVARFA-DDELIIDFDNFVRCLVRLEILFKIFKQLDPENTGTIQLDLISWLSFSVLG  701 (714)
T ss_dssp             HHHHHHHHS-CTTCEECHHHHHHHHHHHHHHHHHHSSSCSSCCSEEEEEHHHHHHHHHHC
T ss_pred             HHHHHHHhC-CCCCeEcHHHHHHHHHHHHHHHHHHHHhCCCCCCcEEHHHHHHHHHHHHH
Confidence            778899999 99999999999999887777888999999999999999998877665443

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}

Probab=99.16  E-value=2.9e-11  Score=88.36  Aligned_cols=69  Identities=26%  Similarity=0.602  Sum_probs=63.7

Q ss_pred             chHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q 014171          266 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL  335 (429)
Q Consensus       266 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~  335 (429)
                      ++++..+++.+|..+|.|++|+|+.+||..++.. +|..++..++..++..+|.+++|.|+|+||+..+.
T Consensus         2 s~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~   70 (77)
T 2joj_A            2 SEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRA-LGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMT   70 (77)
T ss_dssp             CHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHH-HTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHT
T ss_pred             CHHHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH-hCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence            5677889999999999999999999999999955 78899999999999999999999999999998764

>2jjz_A Ionized calcium-binding adapter molecule 2; EF-hand, actin crosslinking, ionized calciu binding adapter molecule 2, metal-binding protein; 2.15A {Homo sapiens} PDB: 2jjz_B 2vtg_A

Probab=99.16  E-value=3.1e-11  Score=100.62  Aligned_cols=89  Identities=18%  Similarity=0.272  Sum_probs=73.0

Q ss_pred             CccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC--
Q 014171          304 KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS--  381 (429)
Q Consensus       304 ~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~--  381 (429)
                      .+++.+++.++..+|.+++    |.+|...            ......++.+|+.||+|++|+|+.+||+.++...|.  
T Consensus        20 ~~~~~~~~~i~~~~d~~~~----~~~~~~l------------~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~   83 (150)
T 2jjz_A           20 ARQERRLAEINREFLCDQK----YSDEENL------------PEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPK   83 (150)
T ss_dssp             HHHHHHHHHHHHHHHTCGG----GSSCTTH------------HHHHHHHHHHHTTSCCCTTSSBCHHHHHHHHHHTTCCC
T ss_pred             CCcHHHHHHHHHHhccCCC----chhhHhH------------HHHHHHHHHHHHHhCCCCcCcCCHHHHHHHHHHcCCCC
Confidence            3567899999999988654    4444321            112356889999999999999999999999987763  


Q ss_pred             ----HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          382 ----IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       382 ----~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                          +..++..+|.|++|.|+|+||+.++..
T Consensus        84 ~~~e~~~l~~~~D~d~dg~I~~~eF~~~~~~  114 (150)
T 2jjz_A           84 THLEMKKMISEVTGGVSDTISYRDFVNMMLG  114 (150)
T ss_dssp             CHHHHHHHHHHHHTTSCSSBCHHHHHHHHHS
T ss_pred             CHHHHHHHHHHHCCCCCCcEeHHHHHHHHHH
Confidence                889999999999999999999999975

>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6

Probab=99.16  E-value=4.9e-11  Score=90.53  Aligned_cols=70  Identities=29%  Similarity=0.340  Sum_probs=62.6

Q ss_pred             cchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhh
Q 014171          265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV  337 (429)
Q Consensus       265 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~  337 (429)
                      +++++..+++++|+.+|.|++|+|+.+|+..++.. +|  .++.++.++++.+|.|++|.|+|+||+.++...
T Consensus         3 ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~-~g--~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~   72 (92)
T 1fi6_A            3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTK-SK--LPILELSHIWELSDFDKDGALTLDEFCAAFHLV   72 (92)
T ss_dssp             CCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHH-HS--SCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-cC--CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
Confidence            46778889999999999999999999999999965 55  678899999999999999999999999887654

>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A

Probab=99.15  E-value=3.8e-11  Score=89.83  Aligned_cols=74  Identities=14%  Similarity=0.169  Sum_probs=66.7

Q ss_pred             hhcccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHH---HHHHHHHhcCCCCCcccHHHHHHHHhh
Q 014171          261 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR---VLEILQAIDCNTDGLVDFSEFVAATLH  336 (429)
Q Consensus       261 ~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~---~~~l~~~~d~~~~g~I~~~eF~~~~~~  336 (429)
                      +...++++++.+++++|..+|.|++|+|+..||..++. .+|..++..+   +..++..+|.+++|.|+| ||+.++..
T Consensus         4 ~~~~l~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~-~~g~~~~~~~~~~~~~~~~~~d~~~~g~i~~-eF~~~~~~   80 (86)
T 1j7q_A            4 KARALGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLT-KLGQTYTKRETEAIMKEARGPKGDKKNIGPE-EWLTLCSK   80 (86)
T ss_dssp             CCCCCSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHH-HTSCCCSHHHHHHHHHHHHCSSCSSCCBCTT-HHHHHHHH
T ss_pred             ccccCCHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHH-HHcCCCCHHHHHHHHHHHHHhCCCCCCcCCH-HHHHHHHH
Confidence            34567788899999999999999999999999999995 4899999999   999999999999999999 99987643

>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A

Probab=99.14  E-value=1.7e-10  Score=95.89  Aligned_cols=101  Identities=20%  Similarity=0.299  Sum_probs=80.9

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHH
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR  351 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~  351 (429)
                      ++...|..+|.+++|.|+..||..++........+.+++...|+.+|.|++|.|+.+||..++......   .+   ...
T Consensus        47 ~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~I~~~El~~~l~~~g~~---~~---~~e  120 (148)
T 2lmt_A           47 ELQDLIAEAENNNNGQLNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEK---VT---DEE  120 (148)
T ss_dssp             HHHHHHHHHHTTSTTEEEHHHHHHHHHHTTTTTTTHHHHHHHHHHHHSSCSSEECHHHHHHHHHHHTCC---CC---HHH
T ss_pred             HHHHHHHhcccCCCCcccHHHHHHHHHHHhcccCcHHHHHHHHHHHCCCCcCcCcHHHHHHHHHHcCcc---cc---HHH
Confidence            355568888999999999999998887656666677889999999999999999999998776543221   11   235


Q ss_pred             HHHHhccccCCCCCccCHHHHHhhhcC
Q 014171          352 SQAAFEKFDIDRDGFITPEELRMHTGL  378 (429)
Q Consensus       352 l~~~F~~~D~~~~G~I~~~el~~~~~~  378 (429)
                      +..+|+.+|.|++|.|+.+||.+++..
T Consensus       121 ~~~l~~~~D~d~dG~I~~~EF~~~m~~  147 (148)
T 2lmt_A          121 IDEMIREADFDGDGMINYEEFVWMISQ  147 (148)
T ss_dssp             HHHHHHHHCCSCCSSEEHHHHHHHHTT
T ss_pred             HHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence            677899999999999999999988764

>1xk4_C Calgranulin B; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1irj_A*

Probab=99.14  E-value=5.5e-11  Score=93.92  Aligned_cols=89  Identities=19%  Similarity=0.314  Sum_probs=63.2

Q ss_pred             hHHHhhhhccccccCC-CCCC-cccHHHHHHHHHhhCCCC-----ccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhh
Q 014171          267 DEELADLRDQFDAIDV-DKNG-SISLEEMRQALAKDLPWK-----LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ  339 (429)
Q Consensus       267 ~~~~~~l~~~F~~~D~-~~~G-~i~~~el~~~l~~~~~~~-----~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~  339 (429)
                      ++++.+++++|+.+|. |++| +|+.+||..+|...+|..     .++.+++.+++.+|.|++|.|+|+||+.++.....
T Consensus         8 ~~~~~~l~~~F~~fD~~dgdG~~Is~~El~~~l~~~lg~~~~~~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~~~   87 (113)
T 1xk4_C            8 ERNIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMARLTW   87 (113)
T ss_dssp             HHHHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCCCCEECHHHHHHHHHHHhhhhhcccccCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHHHH
Confidence            3456789999999995 9999 999999999996457742     57889999999999999999999999987754321


Q ss_pred             hcccccHHHHHHHHHHhccccCCCCCcc
Q 014171          340 LEEHDSEKWHLRSQAAFEKFDIDRDGFI  367 (429)
Q Consensus       340 ~~~~~~~~~~~~l~~~F~~~D~~~~G~I  367 (429)
                                 .....|...| +++|.=
T Consensus        88 -----------~~~~~f~~~~-~~~g~~  103 (113)
T 1xk4_C           88 -----------ASHEKMHEGD-EGPGHH  103 (113)
T ss_dssp             -----------HHHC-------------
T ss_pred             -----------HHHHHHhhCC-CCCccc
Confidence                       2345688888 888753

>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6

Probab=99.14  E-value=4.1e-11  Score=90.94  Aligned_cols=66  Identities=21%  Similarity=0.309  Sum_probs=57.7

Q ss_pred             HHHHHHHhccccCCCCCccCHHHHHhhhcCCC----CHHHHHHHhCCCCCCcccHHHHHHHHHhccccCC
Q 014171          349 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTASISSR  414 (429)
Q Consensus       349 ~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~----~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~~~~  414 (429)
                      ...++++|+.||+|++|+|+.+|++.++...+    ++.+++..+|.|+||.|+|+||+.+|........
T Consensus         8 ~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~~~~~~   77 (92)
T 1fi6_A            8 RQYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALTLDEFCAAFHLVVARKN   77 (92)
T ss_dssp             HHHHHHHHTTTCCSTTCEEEHHHHHHHHHHHSSCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHc
Confidence            35688999999999999999999999987665    3888999999999999999999999987665443

>3qrx_A Centrin; calcium-binding, EF-hand, cell division, calcium binding, ME binding protein-toxin complex; 2.20A {Chlamydomonas reinhardtii} PDB: 2ggm_A 2ami_A 1zmz_A

Probab=99.14  E-value=1e-10  Score=99.18  Aligned_cols=102  Identities=15%  Similarity=0.228  Sum_probs=80.6

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHH
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR  351 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~  351 (429)
                      .+..+|..+|.|++|.|+.+||..++....+.......+..+|..+|.|++|.|+.+||..++......   -.   ...
T Consensus        65 ~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~---~~---~~~  138 (169)
T 3qrx_A           65 EIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGEN---LT---EEE  138 (169)
T ss_dssp             HHHHHHHHHCSSSSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCC---CC---HHH
T ss_pred             HHHHHHHHhcCCCCCcCCHHHHHHHHHHHhcccCcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCC---CC---HHH
Confidence            355668889999999999999999986543333346688999999999999999999999877644211   11   235


Q ss_pred             HHHHhccccCCCCCccCHHHHHhhhcCC
Q 014171          352 SQAAFEKFDIDRDGFITPEELRMHTGLK  379 (429)
Q Consensus       352 l~~~F~~~D~~~~G~I~~~el~~~~~~~  379 (429)
                      +..+|+.+|.|++|.|+.+||..++...
T Consensus       139 ~~~~~~~~D~~~dg~i~~~eF~~~~~~~  166 (169)
T 3qrx_A          139 LQEMIAEADRNDDNEIDEDEFIRIMKKT  166 (169)
T ss_dssp             HHHHHHHHCCSSSSCBCHHHHHHHHC--
T ss_pred             HHHHHHHhCCCCCCCEeHHHHHHHHHhc
Confidence            7789999999999999999999988754

>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A

Probab=99.13  E-value=1.3e-10  Score=91.02  Aligned_cols=103  Identities=13%  Similarity=0.174  Sum_probs=78.1

Q ss_pred             ccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhccc
Q 014171          264 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH  343 (429)
Q Consensus       264 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~  343 (429)
                      .++.++   +.++|+.+|  ++|.|+.+||..++..   ......++..+|..+|.|++|.|+.+||..++.........
T Consensus         6 ~~~~~e---i~~~~~~~D--~~g~i~~~eF~~~~~~---~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~   77 (109)
T 3fs7_A            6 ILSAKD---IESALSSCQ--AADSFNYKSFFSTVGL---SSKTPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARV   77 (109)
T ss_dssp             TSCHHH---HHHHHHHTC--STTCCCHHHHHHHHTC---TTCCHHHHHHHHHHHSTTCSSSBCHHHHHTTGGGTCTTSCC
T ss_pred             cCCHHH---HHHHHHhcC--CCCcCcHHHHHHHHhc---CCCcHHHHHHHHHHHCCCCCCeEeHHHHHHHHHHHhccccc
Confidence            345555   445566677  7999999999999843   23467889999999999999999999998766543110111


Q ss_pred             ccHHHHHHHHHHhccccCCCCCccCHHHHHhhhc
Q 014171          344 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG  377 (429)
Q Consensus       344 ~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~  377 (429)
                      ..   ...+..+|+.+|.|++|.|+.+||..+++
T Consensus        78 ~~---~~~~~~~~~~~D~~~dg~i~~~EF~~~~~  108 (109)
T 3fs7_A           78 LT---SAETKAFLAAGDTDGDGKIGVEEFQSLVK  108 (109)
T ss_dssp             CC---HHHHHHHHHHHCTTCSSSBCHHHHHHHHT
T ss_pred             CC---HHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence            11   23577899999999999999999998875

>4drw_A Protein S100-A10/annexin A2 chimeric protein; atypical EF-hand, heteropentameric complex, membrane repair; 3.50A {Homo sapiens}

Probab=99.13  E-value=9.7e-11  Score=92.89  Aligned_cols=61  Identities=25%  Similarity=0.468  Sum_probs=54.3

Q ss_pred             HHHHHHHhccccCCCCCccCHHHHHhhhcCC-----C------CHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          349 HLRSQAAFEKFDIDRDGFITPEELRMHTGLK-----G------SIDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       349 ~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~-----~------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      .+.++.+|..||.| +|+|+++||+.+++..     +      +++++|+++|.|+||.|+|+||+.+|.+..
T Consensus        14 ie~l~~~F~~yd~d-dG~Is~~EL~~~l~~~~~~~l~~~~~~~~v~~~i~~~D~d~DG~IdF~EF~~lm~~l~   85 (121)
T 4drw_A           14 METMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLT   85 (121)
T ss_dssp             HHHHHHTTGGGSCT-TCSCCHHHHHHHTTTSCHHHHTTSSCTTHHHHHHHHHCTTCSSCCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCC-CCEEcHHHHHHHHHHHhhhhcccCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHH
Confidence            46789999999988 8999999999999762     2      389999999999999999999999998654

>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=99.13  E-value=4.9e-11  Score=93.51  Aligned_cols=64  Identities=19%  Similarity=0.214  Sum_probs=57.5

Q ss_pred             HHHHHHhccccCCCCCccCHHHHHhhhcCCC----CHHHHHHHhCCCCCCcccHHHHHHHHHhccccC
Q 014171          350 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTASISS  413 (429)
Q Consensus       350 ~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~----~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~~~  413 (429)
                      ..++++|+.||+|++|+|+.+||+.++...+    ++.+++..+|.|+||.|+|+||+.+|.......
T Consensus        22 ~~~~~~F~~~D~d~dG~Is~~el~~~l~~~gl~~~el~~i~~~~D~d~dG~I~~~EF~~~m~~~~~~~   89 (110)
T 1iq3_A           22 EYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIWELSDADCDGALTLPEFCAAFHLIVARK   89 (110)
T ss_dssp             HHHHHHHHHHCCSSSSEEEHHHHHHHCCSSSCSSCCHHHHHHHHCSSSCSEEEHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCeEcHHHHHHHHHHcCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHH
Confidence            4688999999999999999999999998775    599999999999999999999999998766444

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=99.13  E-value=1.1e-11  Score=92.90  Aligned_cols=79  Identities=32%  Similarity=0.406  Sum_probs=63.5

Q ss_pred             CCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCC
Q 014171          320 NTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDK  393 (429)
Q Consensus       320 ~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~  393 (429)
                      |++|.|+|+|++  +.  ..+.....    ..++.+|+.+|+|++|+|+.+||+.++...+.      +..++..+|.|+
T Consensus         1 ~~~G~i~~~e~~--~~--~~l~~~~~----~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~l~~~~d~~~   72 (87)
T 1s6j_A            1 HSSGHIDDDDKH--MA--ERLSEEEI----GGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDK   72 (87)
T ss_dssp             CCSSSSSSHHHH--SS--SSSCSSST----TTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTC
T ss_pred             CCCCccCccHHH--HH--HHCCHHHH----HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCC
Confidence            578999999943  22  12222221    24678999999999999999999999988873      889999999999


Q ss_pred             CCcccHHHHHHHH
Q 014171          394 DGRISLSEFRRLL  406 (429)
Q Consensus       394 dg~i~~~ef~~~~  406 (429)
                      +|.|+|+||+.++
T Consensus        73 ~g~i~~~eF~~~~   85 (87)
T 1s6j_A           73 SGTIDYGEFIAAT   85 (87)
T ss_dssp             SSEECHHHHTTCC
T ss_pred             CCcCcHHHHHHHH
Confidence            9999999998754

>2sas_A Sarcoplasmic calcium-binding protein; 2.40A {Branchiostoma lanceolatum} SCOP: a.39.1.5

Probab=99.13  E-value=5.8e-11  Score=102.13  Aligned_cols=95  Identities=18%  Similarity=0.211  Sum_probs=76.7

Q ss_pred             ccccccCCCCCCcccHHHHHHHHHhhCCC--------CccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccH
Q 014171          275 DQFDAIDVDKNGSISLEEMRQALAKDLPW--------KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE  346 (429)
Q Consensus       275 ~~F~~~D~~~~G~i~~~el~~~l~~~~~~--------~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~  346 (429)
                      .+|..+|.|++|.|+.+||..++......        ......+..+|..+|.|++|.|+++||..++.... +..    
T Consensus        64 ~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~g-~~~----  138 (185)
T 2sas_A           64 DLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ-LQC----  138 (185)
T ss_dssp             HHHHHHCTTCSSCEEHHHHHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSC-CCC----
T ss_pred             HHHHhcCCCCCCeEcHHHHHHHHHHHhccccchhhhhHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHHhC-CCH----
Confidence            55999999999999999999998653222        22447889999999999999999999998765432 211    


Q ss_pred             HHHHHHHHHhccccCCCCCccCHHHHHhhhc
Q 014171          347 KWHLRSQAAFEKFDIDRDGFITPEELRMHTG  377 (429)
Q Consensus       347 ~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~  377 (429)
                         ..+..+|+.+|.|++|.|+.+||..++.
T Consensus       139 ---~~~~~~~~~~D~d~dG~i~~~ef~~~~~  166 (185)
T 2sas_A          139 ---ADVPAVYNVITDGGKVTFDLNRYKELYY  166 (185)
T ss_dssp             ---SSHHHHHHHHHTTTTSCCSHHHHHHHHH
T ss_pred             ---HHHHHHHHHhcCCCCCcCcHHHHHHHHH
Confidence               2366789999999999999999998764

>2zfd_A Calcineurin B-like protein 2; calcium binding protein, protein-protein complex, ATP-bindin kinase, nucleotide-binding; 1.20A {Arabidopsis thaliana} SCOP: a.39.1.5 PDB: 1uhn_A

Probab=99.13  E-value=1.6e-10  Score=103.24  Aligned_cols=109  Identities=22%  Similarity=0.224  Sum_probs=84.4

Q ss_pred             hhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhh-hh-cccccHHHHH
Q 014171          273 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVH-QL-EEHDSEKWHL  350 (429)
Q Consensus       273 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~-~~-~~~~~~~~~~  350 (429)
                      +.++|..+|.|++|.|+.+||..++...........++..+|..+|.|++|.|+++||..++.... .. ......+...
T Consensus        87 ~~~~f~~~D~d~dG~I~~~Ef~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~Is~~E~~~~l~~~~~~~g~~~~~~~~~~  166 (226)
T 2zfd_A           87 ADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIED  166 (226)
T ss_dssp             HHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHH
T ss_pred             HHHHHHHHcCCCCCcCcHHHHHHHHHHHccCCCHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHcCCCCCHHHHHH
Confidence            456799999999999999999999965333445677899999999999999999999998775321 11 1111222334


Q ss_pred             HHHHHhccccCCCCCccCHHHHHhhhcCCCC
Q 014171          351 RSQAAFEKFDIDRDGFITPEELRMHTGLKGS  381 (429)
Q Consensus       351 ~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~  381 (429)
                      .+..+|+.+|.|++|.|+.+||..++.....
T Consensus       167 ~~~~~f~~~D~d~dG~I~~~EF~~~~~~~~~  197 (226)
T 2zfd_A          167 IIDKTFEEADTKHDGKIDKEEWRSLVLRHPS  197 (226)
T ss_dssp             HHHHHHHHHCSSCSSEECHHHHHHHHHHSGG
T ss_pred             HHHHHHHHhCCCCCCcCcHHHHHHHHHhChH
Confidence            4578899999999999999999998876543

>2bl0_C Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}

Probab=99.12  E-value=1.8e-10  Score=94.58  Aligned_cols=99  Identities=13%  Similarity=0.164  Sum_probs=80.7

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHH
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR  351 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~  351 (429)
                      .+..+|..+|.|++|.|+.+||..++............+..+|..+|.|++|.|+.+||..++......   -+   ...
T Consensus        43 ~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~g~~---~~---~~~  116 (142)
T 2bl0_C           43 AFNEMFNEADATGNGKIQFPEFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDR---LK---PHE  116 (142)
T ss_dssp             HHHHHHHHHCTTCSSEEEHHHHHHHHHHHHTTCCCHHHHHHHHHHTCCSSCSCEEHHHHHHHHHHSSSC---CC---HHH
T ss_pred             HHHHHHHHhCcCCCCeeeHHHHHHHHHHHhcCCChHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHcCCC---CC---HHH
Confidence            355678899999999999999999987544445577889999999999999999999999877543211   11   235


Q ss_pred             HHHHhccccCCCCCccCHHHHHhhhc
Q 014171          352 SQAAFEKFDIDRDGFITPEELRMHTG  377 (429)
Q Consensus       352 l~~~F~~~D~~~~G~I~~~el~~~~~  377 (429)
                      +..+|+.+| |++|.|+.+||..++.
T Consensus       117 ~~~~~~~~d-~~dg~i~~~eF~~~~~  141 (142)
T 2bl0_C          117 FAEFLGITE-TEKGQIRYDNFINTMF  141 (142)
T ss_dssp             HHHHHHHHC-CSSSEECSHHHHTTTC
T ss_pred             HHHHHHHhC-CCCCcEeHHHHHHHHc
Confidence            778999999 9999999999998764

>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}

Probab=99.12  E-value=1e-10  Score=92.04  Aligned_cols=71  Identities=20%  Similarity=0.297  Sum_probs=63.6

Q ss_pred             cchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhh
Q 014171          265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVH  338 (429)
Q Consensus       265 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~  338 (429)
                      +++++.++++++|+.+|.|++|+|+.+||..++.   +..+++.++..+++.+|.|++|.|+|+||+.++....
T Consensus         8 ls~~~~~~l~~~F~~~D~d~dG~I~~~El~~~l~---~~~~~~~~~~~i~~~~D~d~dG~I~~~EF~~~~~~~~   78 (111)
T 2kgr_A            8 VPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILM---QSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMHLID   78 (111)
T ss_dssp             SCHHHHHHHHHHHHTTSCSSCCEEEHHHHHHHHH---TTCCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH---hCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHH
Confidence            4667888999999999999999999999999995   5678899999999999999999999999998876543

>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*

Probab=99.12  E-value=7.6e-11  Score=89.45  Aligned_cols=71  Identities=20%  Similarity=0.397  Sum_probs=59.4

Q ss_pred             hHHHhhhhccccccC-CCCC-CcccHHHHHHHHHhhCC----CCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhh
Q 014171          267 DEELADLRDQFDAID-VDKN-GSISLEEMRQALAKDLP----WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV  337 (429)
Q Consensus       267 ~~~~~~l~~~F~~~D-~~~~-G~i~~~el~~~l~~~~~----~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~  337 (429)
                      +..+.+++++|+.+| .||+ |+|+.+||..++...+|    ...++.+++++++.+|.|+||.|+|+||+.++...
T Consensus         6 e~~~~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~~   82 (93)
T 4eto_A            6 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI   82 (93)
T ss_dssp             HHHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence            455678999999997 6885 89999999999965455    34578999999999999999999999999877544

>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}

Probab=99.12  E-value=8.4e-11  Score=90.98  Aligned_cols=71  Identities=20%  Similarity=0.402  Sum_probs=60.7

Q ss_pred             hHHHhhhhccccccC-CCCC-CcccHHHHHHHHHhhCC----CCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhh
Q 014171          267 DEELADLRDQFDAID-VDKN-GSISLEEMRQALAKDLP----WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV  337 (429)
Q Consensus       267 ~~~~~~l~~~F~~~D-~~~~-G~i~~~el~~~l~~~~~----~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~  337 (429)
                      +..+.+++++|+.|| .|++ |+|+.+||..+|...+|    ...++.+++++++.+|.|+||.|+|+||+.++...
T Consensus         9 e~~~~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~~   85 (104)
T 3zwh_A            9 EKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSSI   85 (104)
T ss_dssp             HHHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHH
Confidence            456688999999997 7785 89999999999965455    45678999999999999999999999999877644

>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A

Probab=99.12  E-value=7e-11  Score=92.71  Aligned_cols=71  Identities=18%  Similarity=0.339  Sum_probs=62.0

Q ss_pred             chHHHhhhhccccccC-CCCCC-cccHHHHHHHHHhh----CCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhh
Q 014171          266 DDEELADLRDQFDAID-VDKNG-SISLEEMRQALAKD----LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH  336 (429)
Q Consensus       266 ~~~~~~~l~~~F~~~D-~~~~G-~i~~~el~~~l~~~----~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~  336 (429)
                      ...++.+++++|+.|| .|++| +|+.+||..+|...    +|..+++.+++++++.+|.|++|.|+|+||+.++..
T Consensus        17 ~~~~~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~   93 (113)
T 2lnk_A           17 LEKALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSC   93 (113)
T ss_dssp             HHHHHHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHH
T ss_pred             chhHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            3556788999999999 89997 99999999999643    556778899999999999999999999999987654

>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=99.12  E-value=5.8e-11  Score=90.70  Aligned_cols=71  Identities=23%  Similarity=0.230  Sum_probs=63.1

Q ss_pred             cchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhh
Q 014171          265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVH  338 (429)
Q Consensus       265 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~  338 (429)
                      +++++.++++++|+.+|.|++|+|+.+|+..++.. +|  .++.++.++++.+|.|++|.|+|+||+.++....
T Consensus         4 ls~~~~~~~~~~F~~~D~d~dG~I~~~el~~~l~~-~g--~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~~   74 (95)
T 1c07_A            4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLK-TG--LPSTLLAHIWSLCDTKDCGKLSKDQFALAFHLIS   74 (95)
T ss_dssp             SCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHT-TT--CCHHHHHHHHHHHCTTCSSSEETTTHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH-cC--CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHH
Confidence            46778889999999999999999999999999955 55  6788999999999999999999999998876543

>3khe_A Calmodulin-like domain protein kinase isoform 3; calcium dependent kinase, structural genomics, structural GE consortium, SGC, ATP-binding; 1.95A {Toxoplasma gondii}

Probab=99.11  E-value=2.3e-10  Score=98.99  Aligned_cols=102  Identities=24%  Similarity=0.359  Sum_probs=81.2

Q ss_pred             cHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhccc-----ccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC
Q 014171          306 KESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH-----DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG  380 (429)
Q Consensus       306 ~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~-----~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~  380 (429)
                      ...++..+|..+|.|++|.|+++||..++.........     ........+..+|+.+|.|++|.|+.+||..++....
T Consensus        38 ~~~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~~g~i~~~ef~~~~~~~~  117 (191)
T 3khe_A           38 ETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQ  117 (191)
T ss_dssp             TTHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHTCTTCSSSEEHHHHHHHHSCHH
T ss_pred             HHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHhhcccccccccchhhHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhc
Confidence            45689999999999999999999999877654111100     0011134578899999999999999999999876542


Q ss_pred             ------CHHHHHHHhCCCCCCcccHHHHHHHHH
Q 014171          381 ------SIDPLLEEADIDKDGRISLSEFRRLLR  407 (429)
Q Consensus       381 ------~~~~~~~~~d~~~dg~i~~~ef~~~~~  407 (429)
                            .+..+|..+|.|++|.|+.+||..++.
T Consensus       118 ~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~  150 (191)
T 3khe_A          118 LLLSRERLLAAFQQFDSDGSGKITNEELGRLFG  150 (191)
T ss_dssp             HHCCHHHHHHHHHHHCTTCSSEECHHHHHHHTT
T ss_pred             ccchHHHHHHHHHHHCCCCcCcCCHHHHHHHHc
Confidence                  378899999999999999999999987

>3ll8_B Calcineurin subunit B type 1; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 1mf8_B* 2p6b_B 1aui_B 1m63_B* 1tco_B*

Probab=99.11  E-value=2.3e-10  Score=95.34  Aligned_cols=108  Identities=19%  Similarity=0.182  Sum_probs=82.2

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHH
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR  351 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~  351 (429)
                      .+..+|..+|.|++|.|+.+||..++............+..+|..+|.|++|.|+.+||..++....... ....+....
T Consensus        39 ~~~~~~~~~D~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~-~~~~~~~~~  117 (155)
T 3ll8_B           39 LVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNN-LKDTQLQQI  117 (155)
T ss_dssp             THHHHHHHHCTTCSSSBCHHHHHHHHGGGCSSCCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHGGG-SCHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccC-CCHHHHHHH
Confidence            3456788899999999999999999965433445667899999999999999999999998876532211 111222233


Q ss_pred             HHHHhccccCCCCCccCHHHHHhhhcCCC
Q 014171          352 SQAAFEKFDIDRDGFITPEELRMHTGLKG  380 (429)
Q Consensus       352 l~~~F~~~D~~~~G~I~~~el~~~~~~~~  380 (429)
                      +..+|+.+|.|++|.|+.+||..++...+
T Consensus       118 ~~~~~~~~D~~~dg~i~~~eF~~~~~~~~  146 (155)
T 3ll8_B          118 VDKTIINADKDGDGRISFEEFCAVVGGLD  146 (155)
T ss_dssp             HHHHHHHHCTTSSSSBCHHHHHHHHGGGC
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHhccC
Confidence            44455559999999999999999987765

>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A

Probab=99.11  E-value=2.2e-10  Score=96.06  Aligned_cols=99  Identities=15%  Similarity=0.223  Sum_probs=80.8

Q ss_pred             hhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHH
Q 014171          273 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS  352 (429)
Q Consensus       273 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l  352 (429)
                      +..+|..+|.+++|.|+.+||..++............+..+|..+|.+++|.|+.+||..++.......   .   ...+
T Consensus        61 ~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~---~---~~~~  134 (161)
T 3fwb_A           61 ILDLIDEYDSEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETL---T---DEEL  134 (161)
T ss_dssp             HHHHHHHHCTTSSSCEEHHHHHHHHHHHHHTCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCC---C---HHHH
T ss_pred             HHHHHHHhCcCCCCeEeHHHHHHHHHHHHhcCCcHHHHHHHHHHHcCCCCCeEeHHHHHHHHHHhCCCC---C---HHHH
Confidence            556688889999999999999999865444445577899999999999999999999998776442211   1   2357


Q ss_pred             HHHhccccCCCCCccCHHHHHhhhc
Q 014171          353 QAAFEKFDIDRDGFITPEELRMHTG  377 (429)
Q Consensus       353 ~~~F~~~D~~~~G~I~~~el~~~~~  377 (429)
                      ..+|+.+|.|++|.|+.+||..++.
T Consensus       135 ~~~~~~~d~~~~g~i~~~eF~~~~~  159 (161)
T 3fwb_A          135 RAMIEEFDLDGDGEINENEFIAICT  159 (161)
T ss_dssp             HHHHHTTCSSSSSSEEHHHHHHHHH
T ss_pred             HHHHHHhCCCCCCcCcHHHHHHHHh
Confidence            7899999999999999999998774

>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=99.11  E-value=8.3e-11  Score=89.80  Aligned_cols=64  Identities=23%  Similarity=0.278  Sum_probs=57.2

Q ss_pred             HHHHHHHhccccCCCCCccCHHHHHhhhcCCC----CHHHHHHHhCCCCCCcccHHHHHHHHHhcccc
Q 014171          349 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTASIS  412 (429)
Q Consensus       349 ~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~----~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~~  412 (429)
                      ...++++|+.||+|++|+|+.+|++.++...+    ++.+++..+|.|+||.|+|+||+.+|......
T Consensus         9 ~~~~~~~F~~~D~d~dG~I~~~el~~~l~~~g~~~~~~~~i~~~~D~d~dG~i~~~EF~~~~~~~~~~   76 (95)
T 1c07_A            9 KAKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWSLCDTKDCGKLSKDQFALAFHLISQK   76 (95)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHTTTCCHHHHHHHHHHHCTTCSSSEETTTHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCCCCCCcEeHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHHHH
Confidence            35688999999999999999999999998876    38889999999999999999999999776643

>2jnf_A Troponin C; stretch activated muscle contraction, EF-hand, metal binding protein; NMR {Lethocerus indicus} PDB: 2k2a_A

Probab=99.11  E-value=4.3e-10  Score=94.09  Aligned_cols=97  Identities=12%  Similarity=0.153  Sum_probs=79.9

Q ss_pred             HHHHHHHHHhc-CCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhc---------
Q 014171          308 SRVLEILQAID-CNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG---------  377 (429)
Q Consensus       308 ~~~~~l~~~~d-~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~---------  377 (429)
                      .++..+|..+| .|++|.|+.+||..++.......   .   ...+..+|+.+|.|++|.|+.+||..++.         
T Consensus        13 ~~l~~~F~~~D~~~~~G~i~~~e~~~~l~~~~~~~---~---~~~~~~l~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~   86 (158)
T 2jnf_A           13 KLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQ---T---KSTIRQLIDEFDPFGNGDIDFDSFKIIGARFLGEEVNP   86 (158)
T ss_dssp             HHHHHHHHHSBCSSSCSSEEHHHHHHHHHHTTCSC---S---HHHHHHHHHHHCTTCCSEECHHHHHHHHHHHCCCCCCT
T ss_pred             HHHHHHHHHhCCCCCCCcCcHHHHHHHHHHhCCCC---C---HHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhccccch
Confidence            35678999999 99999999999998775432211   1   23577899999999999999999998873         


Q ss_pred             --CCCCHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          378 --LKGSIDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       378 --~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                        ....+..+|..+|.|++|.|+.+||..+++...
T Consensus        87 ~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g  121 (158)
T 2jnf_A           87 EQMQQELREAFRLYDKEGNGYISTDVMREILAELD  121 (158)
T ss_dssp             TTTSSTHHHHHHHHCSSSSSSEEHHHHHHHHHHHC
T ss_pred             hhHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhC
Confidence              334589999999999999999999999998653

>1dtl_A Cardiac troponin C; helix-turn-helix, structural protein; HET: BEP; 2.15A {Gallus gallus} SCOP: a.39.1.5 PDB: 1j1d_A 1j1e_A 2jt3_A 2jt0_A 1la0_A 2jtz_A* 2jt8_A* 2kfx_T* 1wrk_A* 1wrl_A* 1ap4_A 1lxf_C* 1mxl_C 1spy_A 2krd_C* 2l1r_A* 3rv5_A* 2ctn_A 2kgb_C 2jxl_A ...

Probab=99.11  E-value=1.2e-10  Score=97.78  Aligned_cols=101  Identities=19%  Similarity=0.295  Sum_probs=79.5

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCC---CCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHH
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLP---WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKW  348 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~---~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~  348 (429)
                      .+..+|..+|.|++|.|+.+||..++.....   .......+..+|..+|.|++|.|+.+||..++....   ..-.   
T Consensus        56 ~~~~~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~El~~~l~~~g---~~~~---  129 (161)
T 1dtl_A           56 ELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATG---ETIT---  129 (161)
T ss_dssp             HHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-----CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC-----CCC---
T ss_pred             HHHHHHHHhCCCCCCeEcHHHHHHHHHHHhcccccchHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC---CCCC---
Confidence            3556688999999999999999999866443   344567899999999999999999999987654331   1111   


Q ss_pred             HHHHHHHhccccCCCCCccCHHHHHhhhcC
Q 014171          349 HLRSQAAFEKFDIDRDGFITPEELRMHTGL  378 (429)
Q Consensus       349 ~~~l~~~F~~~D~~~~G~I~~~el~~~~~~  378 (429)
                      ...+..+|+.+|.|++|.|+.+||..++..
T Consensus       130 ~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  159 (161)
T 1dtl_A          130 EDDIEELMKDGDKNNDGRIDYDEFLEFMKG  159 (161)
T ss_dssp             HHHHHHHHHHHCTTSSSEEEHHHHHHHHHC
T ss_pred             HHHHHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence            235778999999999999999999988764

>2ccm_A Calexcitin; EF hand, calcium, signaling protein; 1.8A {Loligo pealeii}

Probab=99.10  E-value=1.8e-10  Score=99.86  Aligned_cols=95  Identities=14%  Similarity=0.123  Sum_probs=76.0

Q ss_pred             ccccccCCCCCCcccHHHHHHHHHhhCC--------CCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccH
Q 014171          275 DQFDAIDVDKNGSISLEEMRQALAKDLP--------WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE  346 (429)
Q Consensus       275 ~~F~~~D~~~~G~i~~~el~~~l~~~~~--------~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~  346 (429)
                      ..|..+|.|++|.|+.+||..++.....        .......+..+|+.+|.|++|.|+++||..++.... +.     
T Consensus        68 ~~~~~~D~d~dG~i~~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~I~~~E~~~~l~~~g-~~-----  141 (191)
T 2ccm_A           68 GLRKYADENEDEQVTKEEWLKMWAECVKSVEKGESLPEWLTKYMNFMFDVNDTSGDNIIDKHEYSTVYMSYG-IP-----  141 (191)
T ss_dssp             HHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHCTTCSSBCCHHHHHHHHHTTT-CC-----
T ss_pred             HHHHhcCCCCCCeECHHHHHHHHHHHhccccchhhchHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhC-CC-----
Confidence            4458899999999999999998865311        122346789999999999999999999998775442 11     


Q ss_pred             HHHHHHHHHhccccCCCCCccCHHHHHhhhc
Q 014171          347 KWHLRSQAAFEKFDIDRDGFITPEELRMHTG  377 (429)
Q Consensus       347 ~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~  377 (429)
                        ...+..+|+.+|+|++|.|+.+||..++.
T Consensus       142 --~~~~~~~~~~~D~d~dG~i~~~Ef~~~~~  170 (191)
T 2ccm_A          142 --KSDCDAAFDTLSDGGKTMVTREIFARLWT  170 (191)
T ss_dssp             --HHHHHHHHHHHTTTTTSCCBHHHHHHHHH
T ss_pred             --HHHHHHHHHHhCCCCCCCcCHHHHHHHHH
Confidence              23577899999999999999999998774

>1exr_A Calmodulin; high resolution, disorder, metal transport; 1.00A {Paramecium tetraurelia} SCOP: a.39.1.5 PDB: 1n0y_A 1osa_A 1clm_A 1mxe_A 2bbm_A 2bbn_A 4cln_A 4djc_A 2wel_D* 2x51_B 2vas_B* 2bkh_B 3gn4_B 3l9i_C 2ygg_B* 2w73_A 1lvc_D* 1wrz_A 2bki_B 2r28_A ...

Probab=99.10  E-value=2e-10  Score=95.28  Aligned_cols=100  Identities=23%  Similarity=0.357  Sum_probs=78.3

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHH
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR  351 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~  351 (429)
                      ++..+|..+|.|++|.|+.+||..++........+..++...|..+|.|++|.|+.+||..++......   -+   ...
T Consensus        47 ~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~---~~---~~~  120 (148)
T 1exr_A           47 ELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEK---LT---DDE  120 (148)
T ss_dssp             HHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCC---CC---HHH
T ss_pred             HHHHHHHHHCCCCCCcCcHHHHHHHHHhcccCCCcHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhCCC---CC---HHH
Confidence            355668889999999999999998885533223345678899999999999999999999877543211   11   235


Q ss_pred             HHHHhccccCCCCCccCHHHHHhhhc
Q 014171          352 SQAAFEKFDIDRDGFITPEELRMHTG  377 (429)
Q Consensus       352 l~~~F~~~D~~~~G~I~~~el~~~~~  377 (429)
                      +..+|+.+|.|++|.|+.+||..++.
T Consensus       121 ~~~~~~~~d~d~dg~i~~~eF~~~~~  146 (148)
T 1exr_A          121 VDEMIREADIDGDGHINYEEFVRMMV  146 (148)
T ss_dssp             HHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence            77889999999999999999988764

>3akb_A Putative calcium binding protein; EF-hand, metal binding protein; 1.50A {Streptomyces coelicolor} PDB: 3aka_A

Probab=99.10  E-value=1.7e-10  Score=97.20  Aligned_cols=96  Identities=21%  Similarity=0.174  Sum_probs=76.3

Q ss_pred             hccccccCCCCCCcccHHHHHHHHHhhCCCC-cc-----HHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHH
Q 014171          274 RDQFDAIDVDKNGSISLEEMRQALAKDLPWK-LK-----ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEK  347 (429)
Q Consensus       274 ~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~-~~-----~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~  347 (429)
                      ..+|..+|.|++|.|+.+||..++....... ..     ...+..+|..+|.|++|.|+++||..++.... +    .  
T Consensus        58 ~~~f~~~D~d~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~E~~~~l~~~~-~----~--  130 (166)
T 3akb_A           58 QGLAGIADRDGDQRITREEFVTGAVKRLRDKPDRFAEMARPFLHAALGVADTDGDGAVTVADTARALTAFG-V----P--  130 (166)
T ss_dssp             HHHHHHHCTTSSSCEEHHHHHHTHHHHHHHSHHHHHHHHHHHHHHHHHHHCSSSSSCCBHHHHHHHHHHTT-C----C--
T ss_pred             HHHHHHhCCCCCCcCcHHHHHHHHHHHhccCccchHHHHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHhC-C----C--
Confidence            3778999999999999999999886532111 01     23488999999999999999999998776543 1    1  


Q ss_pred             HHHHHHHHhccccCCCCCccCHHHHHhhhc
Q 014171          348 WHLRSQAAFEKFDIDRDGFITPEELRMHTG  377 (429)
Q Consensus       348 ~~~~l~~~F~~~D~~~~G~I~~~el~~~~~  377 (429)
                       ...+..+|+.+|.|++|.|+.+||..++.
T Consensus       131 -~~~~~~~~~~~D~d~dg~i~~~ef~~~~~  159 (166)
T 3akb_A          131 -EDLARQAAAALDTDGDGKVGETEIVPAFA  159 (166)
T ss_dssp             -HHHHHHHHHHHCTTCSSBCCHHHHHHHHH
T ss_pred             -HHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence             23577899999999999999999998764

>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A

Probab=99.10  E-value=1.8e-10  Score=89.54  Aligned_cols=70  Identities=24%  Similarity=0.343  Sum_probs=62.8

Q ss_pred             cchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhh
Q 014171          265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVH  338 (429)
Q Consensus       265 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~  338 (429)
                      +++++..+++++|+.+|. ++|+|+.+|+..+|.. +|  +++.++.++++.+|.|++|.|+|+||+.++....
T Consensus         9 ls~~e~~~~~~~F~~~D~-~dG~Is~~el~~~l~~-~g--l~~~el~~i~~~~D~d~dG~id~~EF~~~m~~~~   78 (106)
T 1eh2_A            9 VKPEDKAKYDAIFDSLSP-VNGFLSGDKVKPVLLN-SK--LPVDILGRVWELSDIDHDGMLDRDEFAVAMFLVY   78 (106)
T ss_dssp             SCHHHHHHHHHHHTTSCC-SSSCCBHHHHHHHHHT-TT--CCHHHHHHHHHHHCSSCSSBCCHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHhCC-CCCeEcHHHHHHHHHH-cC--CCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHH
Confidence            467888999999999999 9999999999999965 55  6789999999999999999999999999876653

>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6

Probab=99.10  E-value=7.1e-11  Score=90.80  Aligned_cols=65  Identities=17%  Similarity=0.228  Sum_probs=57.1

Q ss_pred             HHHHHhccccCCCCCccCHHHHHhhhcCCC----CHHHHHHHhCCCCCCcccHHHHHHHHHhccccCCC
Q 014171          351 RSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTASISSRN  415 (429)
Q Consensus       351 ~l~~~F~~~D~~~~G~I~~~el~~~~~~~~----~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~~~~~  415 (429)
                      .++++|+.||+|++|+|+.+|++.++...+    ++.+++..+|.|+||.|+|+||+.+|+........
T Consensus        12 ~~~~~F~~~D~d~dG~Is~~el~~~l~~~~l~~~~l~~i~~~~D~d~dG~i~~~EF~~~~~~~~~~~~g   80 (99)
T 1qjt_A           12 VYEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILGKIWDLADTDGKGVLSKQEFFVALRLVACAQNG   80 (99)
T ss_dssp             HHHHHHHHHCCTTSSCCCSHHHHHHHHTSSSCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHHHHHHTTT
T ss_pred             HHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHHHHHcC
Confidence            578899999999999999999999998876    38899999999999999999999999865544433

>4eto_A Protein S100-A4; calcium-binding protein, EF-hand, structural genomics, PSI-B protein structure initiative, NEW YORK structural genomics consortium; 1.54A {Homo sapiens} PDB: 1m31_A 2q91_A 3cga_A 3ko0_A* 3m0w_A*

Probab=99.10  E-value=5.8e-11  Score=90.10  Aligned_cols=62  Identities=16%  Similarity=0.229  Sum_probs=53.6

Q ss_pred             HHHHHHHhcccc-CCCC-CccCHHHHHhhhcC-CC----------CHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          349 HLRSQAAFEKFD-IDRD-GFITPEELRMHTGL-KG----------SIDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       349 ~~~l~~~F~~~D-~~~~-G~I~~~el~~~~~~-~~----------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      ...++++|+.|| +|++ |+|+++||+.+++. .|          +++++++++|.|+||.|+|+||+.+|.+..
T Consensus         9 ~~~l~~~F~~fd~~dg~~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~~~~~~   83 (93)
T 4eto_A            9 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCIA   83 (93)
T ss_dssp             HHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGC---CCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCCCCCeECHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHH
Confidence            457899999998 6885 89999999999874 32          389999999999999999999999998654

>3zwh_A Protein S100-A4; Ca-binding protein-motor protein complex, S100 proteins, EF-; 1.94A {Homo sapiens}

Probab=99.10  E-value=6.1e-11  Score=91.77  Aligned_cols=62  Identities=16%  Similarity=0.239  Sum_probs=53.6

Q ss_pred             HHHHHHHhcccc-CCCC-CccCHHHHHhhhcC-CC----------CHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          349 HLRSQAAFEKFD-IDRD-GFITPEELRMHTGL-KG----------SIDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       349 ~~~l~~~F~~~D-~~~~-G~I~~~el~~~~~~-~~----------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      ...++++|+.|| +|++ |+|+.+||+.+++. .+          +++++++++|.|+||.|+|+||+.+|.+..
T Consensus        12 ~~~l~~aF~~fD~~dgd~G~Is~~EL~~~l~~~lg~~l~~~~~~~ev~~~i~~~D~dgDG~Idf~EF~~~m~~~~   86 (104)
T 3zwh_A           12 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSWLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSSIA   86 (104)
T ss_dssp             HHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCGGGSCSSCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHcchhccCCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence            456889999997 7885 89999999999874 32          389999999999999999999999997654

>3mse_B Calcium-dependent protein kinase, putative; CDPKS, malaria, structural genomics consortium, SGC, transfe; 2.10A {Plasmodium falciparum}

Probab=99.09  E-value=3e-10  Score=97.66  Aligned_cols=94  Identities=21%  Similarity=0.263  Sum_probs=79.8

Q ss_pred             HHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC-----C
Q 014171          307 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----S  381 (429)
Q Consensus       307 ~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~-----~  381 (429)
                      ..++.++|..+|.|++|.|+++||..++.... ..       ...+..+|+.+|.|++|.|+.+||..++....     .
T Consensus        38 ~~~l~~~F~~~D~d~~G~i~~~El~~~l~~~g-~~-------~~~~~~~~~~~D~d~~g~i~~~Ef~~~~~~~~~~~~~~  109 (180)
T 3mse_B           38 IKYINELFYKLDTNHNGSLSHREIYTVLASVG-IK-------KWDINRILQALDINDRGNITYTEFMAGCYRWKNIESTF  109 (180)
T ss_dssp             HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTT-CC-------HHHHHHHHHHHCTTCCSEECHHHHHHHHSCCTTC--CH
T ss_pred             HHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcC-CC-------HHHHHHHHHHhCCCCCCcCcHHHHHHHHHhcccCCHHH
Confidence            35678899999999999999999998775442 11       13577899999999999999999999887653     3


Q ss_pred             HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          382 IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       382 ~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                      +..+|..+|.|++|.|+.+||..++++
T Consensus       110 ~~~~F~~~D~d~~G~I~~~El~~~l~~  136 (180)
T 3mse_B          110 LKAAFNKIDKDEDGYISKSDIVSLVHD  136 (180)
T ss_dssp             HHHHHHHHCTTCSSCBCHHHHHHHTTT
T ss_pred             HHHHHHHHCCCCCCCCCHHHHHHHHcC
Confidence            888999999999999999999999984

>3u0k_A Rcamp; fluorescent protein, calcium binding, EF-hand, genetically E calcium indicator; HET: NFA CRK; 2.10A {Entacmaea quadricolor}

Probab=99.09  E-value=2.3e-10  Score=108.73  Aligned_cols=109  Identities=20%  Similarity=0.308  Sum_probs=82.3

Q ss_pred             hhcccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhh
Q 014171          261 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL  340 (429)
Q Consensus       261 ~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~  340 (429)
                      +...+++.+   +.++|..+|.|++|.|+.+||..++...+....+.+++.+.|+.+|.|++|.|+.+||..++......
T Consensus       331 LG~~~TeeE---I~~Lf~~~D~DgDG~IdFeEFl~lms~~lk~~d~eeeLreAFk~fDkDgdG~IS~eELr~vL~~lGe~  407 (440)
T 3u0k_A          331 LGQNPTEAE---LQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEK  407 (440)
T ss_dssp             TTCCCCHHH---HHHHHHHHCSSCSSSEEHHHHHHHHHTC------CHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTCC
T ss_pred             cCCCCCHHH---HHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCCChHHHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCC
Confidence            333445554   55668889999999999999999986644444556789999999999999999999999877544221


Q ss_pred             cccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcC
Q 014171          341 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL  378 (429)
Q Consensus       341 ~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~  378 (429)
                      .   +   .+.+.++|+.+|.|+||.|+.+||.+++..
T Consensus       408 L---S---deEIdeLfke~D~DgDGkIsyeEFvkmMtS  439 (440)
T 3u0k_A          408 L---T---DEEVDEMIREADIDGDGQVNYEEFVQMMTA  439 (440)
T ss_dssp             C---C---HHHHHHHHHHHCTTCSSSEEHHHHHHHHC-
T ss_pred             C---C---HHHHHHHHHHhCCCCCCcEeHHHHHHHhCC
Confidence            1   1   235778899999999999999999998854

>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A

Probab=99.09  E-value=2.4e-10  Score=87.84  Aligned_cols=71  Identities=23%  Similarity=0.342  Sum_probs=59.9

Q ss_pred             hHHHhhhhccccccCCCC---CCcccHHHHHHHHHhhCCCCc----cHHHHHHHHHHhcCCCCCcccHHHHHHHHhhh
Q 014171          267 DEELADLRDQFDAIDVDK---NGSISLEEMRQALAKDLPWKL----KESRVLEILQAIDCNTDGLVDFSEFVAATLHV  337 (429)
Q Consensus       267 ~~~~~~l~~~F~~~D~~~---~G~i~~~el~~~l~~~~~~~~----~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~  337 (429)
                      +..+.+++++|+.||.++   +|+|+.+||..+|...+|..+    ++.+++++++.+|.|++|.|+|+||+.++...
T Consensus         7 e~~i~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~~   84 (100)
T 3nxa_A            7 EKAVIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGI   84 (100)
T ss_dssp             HHHHHHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence            355678999999999864   799999999999976555433    36889999999999999999999999887654

>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4

Probab=99.08  E-value=4.2e-10  Score=88.07  Aligned_cols=103  Identities=15%  Similarity=0.233  Sum_probs=77.9

Q ss_pred             ccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhccc
Q 014171          264 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH  343 (429)
Q Consensus       264 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~  343 (429)
                      .++.+++   .++|+.+|.  +|.|+.+||..++..   ......++..+|..+|.|++|.|+.+||..++.........
T Consensus         5 ~~s~~ei---~~~~~~~d~--~g~i~~~eF~~~~~~---~~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~g~~   76 (109)
T 5pal_A            5 VLKADDI---NKAISAFKD--PGTFDYKRFFHLVGL---KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRD   76 (109)
T ss_dssp             TSCHHHH---HHHHHHTCS--TTCCCHHHHHHHHTC---TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCC
T ss_pred             cCCHHHH---HHHHHHhCC--CCcCcHHHHHHHHhh---ccCcHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHHcCCC
Confidence            3455554   455666776  899999999998843   24467889999999999999999999999877654211111


Q ss_pred             ccHHHHHHHHHHhccccCCCCCccCHHHHHhhhc
Q 014171          344 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG  377 (429)
Q Consensus       344 ~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~  377 (429)
                      ..   ...+..+|+.+|.|++|.|+.+||..++.
T Consensus        77 ~~---~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  107 (109)
T 5pal_A           77 LN---DTETKALLAAGDSDHDGKIGADEFAKMVA  107 (109)
T ss_dssp             CC---HHHHHHHHHHHCTTCSSSEEHHHHHHHHH
T ss_pred             CC---HHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            11   23577899999999999999999998775

>4ds7_A Calmodulin, CAM; protein binding, metal binding, structura; 2.15A {Kluyveromyces lactis} PDB: 1lkj_A 2lhh_A 1f54_A 1f55_A

Probab=99.08  E-value=2.4e-10  Score=94.24  Aligned_cols=98  Identities=21%  Similarity=0.320  Sum_probs=79.1

Q ss_pred             hhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHH
Q 014171          273 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS  352 (429)
Q Consensus       273 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l  352 (429)
                      +..+|..+|.+++|.|+.+||..++............+..+|..+|.|++|.|+.+||..++......   -.   ...+
T Consensus        49 ~~~l~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~---~~---~~~~  122 (147)
T 4ds7_A           49 VADLMNEIDVDGNHAIEFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEK---LT---DAEV  122 (147)
T ss_dssp             HHHHHHHHCTTSSSEEEHHHHHHHHHHHHHTHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCC---CC---HHHH
T ss_pred             HHHHHHHhccCCCCcCcHHHHHHHHHHhccCCCcHHHHHHHHHHhCCCCCCeECHHHHHHHHHHcCCC---CC---HHHH
Confidence            55668888999999999999999986544444456788999999999999999999999887643211   11   2357


Q ss_pred             HHHhccccCCCCCccCHHHHHhhhc
Q 014171          353 QAAFEKFDIDRDGFITPEELRMHTG  377 (429)
Q Consensus       353 ~~~F~~~D~~~~G~I~~~el~~~~~  377 (429)
                      ..+|+.+| |++|.|+.+||..++.
T Consensus       123 ~~~~~~~d-~~dg~i~~~eF~~~l~  146 (147)
T 4ds7_A          123 DEMLREVS-DGSGEINIKQFAALLS  146 (147)
T ss_dssp             HHHHHHHS-SSCSSEEHHHHHHHTT
T ss_pred             HHHHHHhc-CCCCcCcHHHHHHHHh
Confidence            78899999 9999999999998875

>2lnk_A Protein S100-A4; EF-hand, calcium binding, all alpha, metal binding protein, binding protein; NMR {Homo sapiens} PDB: 3c1v_A

Probab=99.08  E-value=1.8e-10  Score=90.36  Aligned_cols=62  Identities=18%  Similarity=0.295  Sum_probs=54.4

Q ss_pred             HHHHHHHhcccc-CCCCC-ccCHHHHHhhhcC-----CC------CHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          349 HLRSQAAFEKFD-IDRDG-FITPEELRMHTGL-----KG------SIDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       349 ~~~l~~~F~~~D-~~~~G-~I~~~el~~~~~~-----~~------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      ...++++|+.|| +|++| +|+.+||+.++..     +|      +++++++++|.|+||.|+|+||+.+|.+..
T Consensus        21 ~~~l~~aF~~fD~~dgdGG~Is~~EL~~~l~~~l~~~lg~~~t~~ev~~li~~~D~dgdG~Idf~EF~~~m~~~~   95 (113)
T 2lnk_A           21 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCIA   95 (113)
T ss_dssp             HHHHHHHHHHTTTTTSCTTCBCHHHHHHHHHHHCGGGGTTCCCTTHHHHHHHHHCSSSSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcchhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHH
Confidence            456889999999 89997 9999999999864     32      389999999999999999999999997654

>2f2o_A Calmodulin fused with calmodulin-binding domain of calcineurin; EF-hands, calcium, metal binding protein; 2.17A {Bos taurus} PDB: 2f2p_A

Probab=99.08  E-value=2.1e-10  Score=98.29  Aligned_cols=103  Identities=22%  Similarity=0.347  Sum_probs=80.6

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHH
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR  351 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~  351 (429)
                      ++..+|..+|.|++|.|+.+||..++............+..+|..+|.|++|.|+.+||..++.......   .   ...
T Consensus        48 ~~~~l~~~~D~~~~g~i~~~EF~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~E~~~~l~~~g~~~---~---~~~  121 (179)
T 2f2o_A           48 ELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKL---T---DEE  121 (179)
T ss_dssp             HHHHHHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC--CC---C---HHH
T ss_pred             HHHHHHHHhccCCCCCCcHHHHHHHHHHHccCcccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCC---C---HHH
Confidence            3566788999999999999999998865332233456789999999999999999999998775442111   1   235


Q ss_pred             HHHHhccccCCCCCccCHHHHHhhhcCCC
Q 014171          352 SQAAFEKFDIDRDGFITPEELRMHTGLKG  380 (429)
Q Consensus       352 l~~~F~~~D~~~~G~I~~~el~~~~~~~~  380 (429)
                      +..+|+.+|.|++|.|+.+||..++...+
T Consensus       122 ~~~~~~~~D~~~dg~i~~~eF~~~~~~~~  150 (179)
T 2f2o_A          122 VDEMIREADIDGDGQVNYEEFVQMMTAKG  150 (179)
T ss_dssp             HHHHHHHHCTTCSSSEEHHHHHHHSCC--
T ss_pred             HHHHHHHcCCCCCCcCcHHHHHHHHHHcC
Confidence            77899999999999999999999987664

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5

Probab=99.08  E-value=1.3e-10  Score=82.25  Aligned_cols=63  Identities=21%  Similarity=0.451  Sum_probs=58.0

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL  335 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~  335 (429)
                      +++++|+.+|.|++|+|+.+||..++.. +|..++..++..++..+|.|++|.|+|+||+..+.
T Consensus         2 ~l~~~F~~~D~d~~G~i~~~el~~~l~~-~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~   64 (67)
T 1tiz_A            2 SAKRVFEKFDKNKDGKLSLDEFREVALA-FSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIE   64 (67)
T ss_dssp             THHHHHHHHCTTSSSCEEHHHHHHHHHH-TCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence            4678899999999999999999999955 89999999999999999999999999999998664

>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A

Probab=99.08  E-value=1.1e-10  Score=89.07  Aligned_cols=70  Identities=23%  Similarity=0.382  Sum_probs=56.2

Q ss_pred             hHHHhhhhccccccC-CCC-CCcccHHHHHHHHHhh----CCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhh
Q 014171          267 DEELADLRDQFDAID-VDK-NGSISLEEMRQALAKD----LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH  336 (429)
Q Consensus       267 ~~~~~~l~~~F~~~D-~~~-~G~i~~~el~~~l~~~----~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~  336 (429)
                      +.++.+++++|+.+| .|+ +|+|+.+||..+|...    +|..+++.+++.+++.+|.|++|.|+|+||+.++..
T Consensus         5 ~~~~~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~   80 (95)
T 1j55_A            5 ETAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAA   80 (95)
T ss_dssp             HHHHHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHH
Confidence            345678999999999 788 5899999999999654    456678889999999999999999999999987754

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}

Probab=99.07  E-value=1.1e-10  Score=83.58  Aligned_cols=65  Identities=31%  Similarity=0.547  Sum_probs=59.4

Q ss_pred             HhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q 014171          270 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL  335 (429)
Q Consensus       270 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~  335 (429)
                      .++++.+|..+|.|++|+|+.+||..++ ..+|..++..++..++..+|.+++|.|+|+||+..+.
T Consensus         5 ~~~l~~~F~~~D~d~~G~i~~~el~~~l-~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~   69 (71)
T 2b1u_A            5 LEDLQVAFRAFDQDGDGHITVDELRRAM-AGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLA   69 (71)
T ss_dssp             HHHHHHHHTTSCCSSSSEEEHHHHHHHG-GGTTCSSCHHHHHHHHHHCCSSSSSEEETTHHHHHHT
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHH-HHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHh
Confidence            4568889999999999999999999999 5589999999999999999999999999999997653

>1top_A Troponin C; contractIle system protein; 1.78A {Gallus gallus} SCOP: a.39.1.5 PDB: 1ncy_A 1ncz_A 1ncx_A 1ytz_C* 1yv0_C 1tnw_A 1tnx_A 5tnc_A 2w49_0 2w4u_0 4tnc_A 1a2x_A 1tcf_A 1tn4_A 2tn4_A 1aj4_A 1jc2_A 1fi5_A 1sbj_A 1scv_A ...

Probab=99.07  E-value=3e-10  Score=95.41  Aligned_cols=102  Identities=20%  Similarity=0.281  Sum_probs=80.0

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCCCCc---cHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHH
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKL---KESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKW  348 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~---~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~  348 (429)
                      .+..+|..+|.|++|.|+.+||..++........   ....+..+|..+|.|++|.|+.+||..++.....   .-+   
T Consensus        57 ~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~e~~~~l~~~g~---~~~---  130 (162)
T 1top_A           57 ELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGE---HVT---  130 (162)
T ss_dssp             HHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTC---CCC---
T ss_pred             HHHHHHHHHcCCCCCcEeHHHHHHHHHHHhccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHhCC---CCC---
Confidence            3556788899999999999999998854321111   4567899999999999999999999987754321   111   


Q ss_pred             HHHHHHHhccccCCCCCccCHHHHHhhhcCC
Q 014171          349 HLRSQAAFEKFDIDRDGFITPEELRMHTGLK  379 (429)
Q Consensus       349 ~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~  379 (429)
                      ...+..+|+.+|.|++|.|+.+||..++...
T Consensus       131 ~~~~~~~~~~~d~~~dg~i~~~eF~~~~~~~  161 (162)
T 1top_A          131 EEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV  161 (162)
T ss_dssp             HHHHHHHHHHHCTTCSSSBCHHHHHHHHHSC
T ss_pred             HHHHHHHHHHhCCCCCCcCcHHHHHHHHhhc
Confidence            2357789999999999999999999988654

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}

Probab=99.07  E-value=1.2e-10  Score=88.11  Aligned_cols=70  Identities=33%  Similarity=0.553  Sum_probs=62.7

Q ss_pred             cccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q 014171          263 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL  335 (429)
Q Consensus       263 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~  335 (429)
                      ..+++++..+++.+|+.+|.|++|+|+.+||..++.. +|  .+..++..++..+|.|++|.|+|+||+..+.
T Consensus        19 ~~l~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~-~g--~~~~~~~~~~~~~D~d~dg~I~~~EF~~~~~   88 (91)
T 2pmy_A           19 ADGDGEELARLRSVFAACDANRSGRLEREEFRALCTE-LR--VRPADAEAVFQRLDADRDGAITFQEFARGFL   88 (91)
T ss_dssp             CHHHHHHHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH-TT--CCHHHHHHHHHHHCTTCSSEECHHHHTHHHH
T ss_pred             ccCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH-cC--cCHHHHHHHHHHhCCCCCCCEeHHHHHHHHH
Confidence            4456788899999999999999999999999999955 77  6788999999999999999999999997654

>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10

Probab=99.07  E-value=6.9e-11  Score=86.56  Aligned_cols=65  Identities=31%  Similarity=0.540  Sum_probs=58.5

Q ss_pred             hhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhh
Q 014171          271 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV  337 (429)
Q Consensus       271 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~  337 (429)
                      ++++.+|..+|.|++|+|+.+||..++.. +| .++..++..++..+|.|++|.|+|+||+..+...
T Consensus         3 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~-~g-~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~~   67 (78)
T 1k9u_A            3 DDMERIFKRFDTNGDGKISLSELTDALRT-LG-STSADEVQRMMAEIDTDGDGFIDFNEFISFCNAN   67 (78)
T ss_dssp             CHHHHHHHHHCTTCSSEECHHHHHHHHHH-HH-TCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHC
T ss_pred             HHHHHHHHHHCCCCCCcCcHHHHHHHHHH-hC-CCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHC
Confidence            35778899999999999999999999965 67 8899999999999999999999999999876544

>3e3r_A Calcyphosin, calcyphosine; human calcyphosine, EF-hand, phosphoprotein, calcium binding; 2.65A {Homo sapiens}

Probab=99.07  E-value=3.4e-10  Score=99.12  Aligned_cols=95  Identities=16%  Similarity=0.245  Sum_probs=78.4

Q ss_pred             HHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------
Q 014171          308 SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------  381 (429)
Q Consensus       308 ~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------  381 (429)
                      .++.++|..+|.|++|.|+++||..++........      ...+..+|+.+|.|++|.|+.+||..++.....      
T Consensus        37 ~~l~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~------~~~~~~~~~~~D~d~dg~i~~~ef~~~~~~~~~~~~~~~  110 (204)
T 3e3r_A           37 QGLARFFRQLDRDGSRSLDADEFRQGLAKLGLVLD------QAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAV  110 (204)
T ss_dssp             ---CHHHHHHCTTCCSSBCHHHHHHHHHTTTCCCC------HHHHHHHHHHHCTTCSSSBCHHHHHHHTSCCCCHHHHHH
T ss_pred             HHHHHHHHHHccCCCCCcCHHHHHHHHHHcCCCCC------HHHHHHHHHHhccCCCCcCcHHHHHHHHHhhcCchHHHH
Confidence            46788999999999999999999987765422211      235778999999999999999999999877653      


Q ss_pred             HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          382 IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       382 ~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                      +..+|..+|.|++|.|+.+||..++..
T Consensus       111 ~~~~F~~~D~d~~G~I~~~El~~~l~~  137 (204)
T 3e3r_A          111 IAAAFAKLDRSGDGVVTVDDLRGVYSG  137 (204)
T ss_dssp             HHHHHHHHCTTCSSEECHHHHHHHCCC
T ss_pred             HHHHHHHhCcCCCCeEeHHHHHHHHcc
Confidence            778999999999999999999999874

>1m45_A MLC1P, myosin light chain; protein-peptide complex, myosin light chain, cell cycle protein; 1.65A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 1m46_A 1n2d_A 2fcd_A 2fce_A

Probab=99.07  E-value=4e-10  Score=93.17  Aligned_cols=101  Identities=13%  Similarity=0.166  Sum_probs=78.1

Q ss_pred             hhhcccccc-CCCCCCcccHHHHHHHHHhh--C---CCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhccccc
Q 014171          272 DLRDQFDAI-DVDKNGSISLEEMRQALAKD--L---PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS  345 (429)
Q Consensus       272 ~l~~~F~~~-D~~~~G~i~~~el~~~l~~~--~---~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~  345 (429)
                      ++..+|..+ |.+++|.|+.+||..++...  .   ........+..+|..+|.|++|.|+.+||..++.......   +
T Consensus        41 ~~~~l~~~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~---~  117 (148)
T 1m45_A           41 LVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKL---T  117 (148)
T ss_dssp             HHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCC---C
T ss_pred             HHHHHHHHhhCCCCCCeEcHHHHHHHHHHHHhhccccccccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHcCCCC---C
Confidence            355668889 99999999999999998653  1   3344567899999999999999999999998776442211   1


Q ss_pred             HHHHHHHHHHhccccCCCCCccCHHHHHhhhcC
Q 014171          346 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL  378 (429)
Q Consensus       346 ~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~  378 (429)
                         ...+..+|+.+|.|++|.|+.+||..++..
T Consensus       118 ---~~~~~~~~~~~d~d~dg~i~~~eF~~~~~~  147 (148)
T 1m45_A          118 ---DAEVDELLKGVEVDSNGEIDYKKFIEDVLR  147 (148)
T ss_dssp             ---HHHHHHHHTTCCCCTTSEEEHHHHHHHHHC
T ss_pred             ---HHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence               235778999999999999999999988753

>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...

Probab=99.07  E-value=2e-10  Score=87.10  Aligned_cols=71  Identities=23%  Similarity=0.435  Sum_probs=61.2

Q ss_pred             hHHHhhhhccccccCCCCCC---cccHHHHHHHHHhh----CCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhh
Q 014171          267 DEELADLRDQFDAIDVDKNG---SISLEEMRQALAKD----LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVH  338 (429)
Q Consensus       267 ~~~~~~l~~~F~~~D~~~~G---~i~~~el~~~l~~~----~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~  338 (429)
                      +..+..++++|+.+| +++|   +|+.+||..+|...    +|..+++.+++++++.+|.|++|.|+|+||+.++..+.
T Consensus         5 e~~~~~l~~~F~~~D-~~dG~~g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~l~   82 (92)
T 3rm1_A            5 EKAVVALIDVFHQYS-GREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAMIT   82 (92)
T ss_dssp             HHHHHHHHHHHHHHH-TSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHc-cCCCCcCeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence            345678999999999 7766   99999999999542    77888999999999999999999999999998776543

>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}

Probab=99.06  E-value=1.6e-10  Score=88.86  Aligned_cols=71  Identities=24%  Similarity=0.359  Sum_probs=61.6

Q ss_pred             hHHHhhhhccccccC-CCCCC-cccHHHHHHHHHhh----CCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhh
Q 014171          267 DEELADLRDQFDAID-VDKNG-SISLEEMRQALAKD----LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV  337 (429)
Q Consensus       267 ~~~~~~l~~~F~~~D-~~~~G-~i~~~el~~~l~~~----~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~  337 (429)
                      +.++.+++++|+.+| .|++| +|+.+||..+|...    +|..+++.+++.+++.+|.|++|.|+|+||+.++...
T Consensus         6 ~~~~~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~   82 (99)
T 2y5i_A            6 EGAMDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAAL   82 (99)
T ss_dssp             HHHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHH
Confidence            345678999999997 89998 99999999999643    4667889999999999999999999999999877644

>1bu3_A Calcium-binding protein; 1.65A {Merluccius bilinearis} SCOP: a.39.1.4

Probab=99.05  E-value=4.6e-10  Score=87.85  Aligned_cols=98  Identities=14%  Similarity=0.132  Sum_probs=74.9

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHH
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR  351 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~  351 (429)
                      ++.++|..+|  ++|.|+.+||..++.. .  .....++..+|..+|.|++|.|+.+||..++...........   ...
T Consensus        11 e~~~~~~~~d--~~g~i~~~eF~~~~~~-~--~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~---~~~   82 (109)
T 1bu3_A           11 DVAAALKACE--AADSFNYKAFFAKVGL-T--AKSADDIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALT---DAE   82 (109)
T ss_dssp             HHHHHHHHTC--STTCCCHHHHHHHHTG-G--GSCHHHHHHHHHHHCTTCSSSEEHHHHHTHHHHHSTTCCCCC---HHH
T ss_pred             HHHHHHHHhC--CCCcCcHHHHHHHHHc-C--hhhHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHcccCCCCC---HHH
Confidence            3455566677  8899999999998843 1  335678999999999999999999999987765420011111   235


Q ss_pred             HHHHhccccCCCCCccCHHHHHhhhc
Q 014171          352 SQAAFEKFDIDRDGFITPEELRMHTG  377 (429)
Q Consensus       352 l~~~F~~~D~~~~G~I~~~el~~~~~  377 (429)
                      +..+|+.+|.|++|.|+.+||..++.
T Consensus        83 ~~~~~~~~D~~~dg~i~~~eF~~~~~  108 (109)
T 1bu3_A           83 TKAFLKAGDSDGDGAIGVDEWAALVK  108 (109)
T ss_dssp             HHHHHHHHCTTCSSEECHHHHHHHHT
T ss_pred             HHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            77899999999999999999998775

>1wdc_C Scallop myosin; calcium binding protein, muscle protein; 2.00A {Argopecten irradians} SCOP: a.39.1.5 PDB: 1kk7_Z 1kqm_C* 1kwo_C* 1l2o_C* 1qvi_Z* 1s5g_Z* 1sr6_C 1b7t_Z 3jvt_C 3jtd_C 1kk8_C* 2ec6_C 1dfk_Z 1dfl_Z* 2w4t_Z 2w4v_Z 2w4w_Z 2otg_C* 2os8_C* 3pn7_C ...

Probab=99.05  E-value=1.3e-09  Score=91.00  Aligned_cols=105  Identities=12%  Similarity=0.093  Sum_probs=82.2

Q ss_pred             ccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCC-CccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcc
Q 014171          264 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW-KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE  342 (429)
Q Consensus       264 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~-~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~  342 (429)
                      .++..+   +..+ ..+|.+++|.|+.+||..++...... ......+..+|..+|.|++|.|+.+||..++......  
T Consensus        43 ~~~~~~---~~~l-~~~D~~~~g~i~~~eF~~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~--  116 (156)
T 1wdc_C           43 NPRNED---VFAV-GGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGER--  116 (156)
T ss_dssp             CCCHHH---HHHT-TCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSC--
T ss_pred             CCCHHH---HHHH-HhhCCCCCCeeeHHHHHHHHHHHhhccCChHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCC--
Confidence            344444   4444 77899999999999999999765443 4567889999999999999999999999877644211  


Q ss_pred             cccHHHHHHHHHHhcc--ccCCCCCccCHHHHHhhhcC
Q 014171          343 HDSEKWHLRSQAAFEK--FDIDRDGFITPEELRMHTGL  378 (429)
Q Consensus       343 ~~~~~~~~~l~~~F~~--~D~~~~G~I~~~el~~~~~~  378 (429)
                       -.   ...+..+|+.  +|.|++|.|+.+||..++..
T Consensus       117 -~~---~~~~~~~~~~~~~D~d~dg~i~~~eF~~~~~~  150 (156)
T 1wdc_C          117 -LS---DEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA  150 (156)
T ss_dssp             -CC---HHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHH
T ss_pred             -CC---HHHHHHHHHHhCCCCCCCCcEeHHHHHHHHhc
Confidence             11   2357788999  99999999999999987753

>3nxa_A Protein S100-A16; S100 family, calcium binding protein, APO, EF-hand calcium binding proteins, S100 proteins, protein dynamics, binding protein; 2.10A {Homo sapiens} SCOP: a.39.1.0 PDB: 2l0u_A 2l0v_A 2l50_A 2l51_A

Probab=99.04  E-value=2.7e-10  Score=87.56  Aligned_cols=62  Identities=23%  Similarity=0.331  Sum_probs=53.6

Q ss_pred             HHHHHHHhccccCCC---CCccCHHHHHhhhcCC-----C------CHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          349 HLRSQAAFEKFDIDR---DGFITPEELRMHTGLK-----G------SIDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       349 ~~~l~~~F~~~D~~~---~G~I~~~el~~~~~~~-----~------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      ...++++|+.||+++   +|+|+.+||+.++...     +      +++++++++|.|+||.|+|+||+.+|.+..
T Consensus        10 i~~l~~~F~~fD~~~g~~~G~Is~~EL~~~l~~~~~~~l~~~~~~~ev~~~i~~~D~d~DG~Idf~EF~~~m~~~~   85 (100)
T 3nxa_A           10 VIVLVENFYKYVSKYSLVKNKISKSSFREMLQKELNHMLSDTGNRKAADKLIQNLDANHDGRISFDEYWTLIGGIT   85 (100)
T ss_dssp             HHHHHHHHHHTSCTTCSCTTCBCHHHHHHHHHHHSTTTTCSSHHHHHHHHHHHHSCCCSSCCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCcCCCCCCeEcHHHHHHHHHHHccccccccccHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence            456899999999963   7999999999988642     1      389999999999999999999999998654

>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}

Probab=99.04  E-value=1.9e-10  Score=83.87  Aligned_cols=63  Identities=25%  Similarity=0.397  Sum_probs=56.6

Q ss_pred             HHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHhccc
Q 014171          349 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRTASI  411 (429)
Q Consensus       349 ~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~  411 (429)
                      ...++.+|+.+|+|++|+|+.+||+.++...|.      +..++..+|.|++|.|+|+||+.++.....
T Consensus         6 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~   74 (77)
T 2joj_A            6 KQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFDDFLDIMTEKIK   74 (77)
T ss_dssp             HHHHHHHHHHHCCSSSSEEEHHHHHHHHHHHTCCCHHHHHHHHHHHHCCSSSSEEEHHHHHHHHTHHHH
T ss_pred             HHHHHHHHHHhCCCCCCCCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHhc
Confidence            456889999999999999999999999987773      888999999999999999999999986543

>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A

Probab=99.04  E-value=1.3e-10  Score=120.64  Aligned_cols=119  Identities=16%  Similarity=0.217  Sum_probs=95.7

Q ss_pred             cCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHh-------cCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHH
Q 014171          280 IDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAI-------DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS  352 (429)
Q Consensus       280 ~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~-------d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l  352 (429)
                      +|.|+||.|+.+|+..++.. .+  ....++.++++..       |.+++|.|+|+||+..+..+.   ..      ..+
T Consensus       164 fd~n~dG~Is~kEl~~~l~~-~~--~~~~el~~~~~~~~~~~~k~D~~~~g~L~FeEF~~f~~~L~---~R------~EI  231 (816)
T 3qr0_A          164 TVEMEKNKIPVKAIQKCLSK-DK--DDRARISKALEKIGWPSGKNDAIDLKAFDFDTFFKFYLALL---ER------SEI  231 (816)
T ss_dssp             HTSCCSSEEEHHHHHHHHCS-CH--HHHHHHHHHHHHHTSCCSTTCEEETTTCCHHHHHHHHHHHC---CC------THH
T ss_pred             ccCCCCCCCCHHHHHHHHHh-cC--ChHHHHHHHHHHhcccccccccCCCCcCCHHHHHHHHHhcC---CH------HHH
Confidence            68999999999999998832 22  1235688888887       577889999999998776543   11      247


Q ss_pred             HHHhccccCCCCCccCHHHHHhhhcCCC-C---------------HHHHHHHhCC--C----CCCcccHHHHHHHHHhcc
Q 014171          353 QAAFEKFDIDRDGFITPEELRMHTGLKG-S---------------IDPLLEEADI--D----KDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       353 ~~~F~~~D~~~~G~I~~~el~~~~~~~~-~---------------~~~~~~~~d~--~----~dg~i~~~ef~~~~~~~~  410 (429)
                      +++|+.||.|++|+||. ||+++|...+ +               +.++++.++.  |    ++|.+++++|..+|....
T Consensus       232 ~eiF~~y~~dg~~~mT~-eL~~FL~~~Q~E~~~~~~~~~~~t~e~~~~iI~kye~~~~~~~~~~g~LsldgF~~yL~S~~  310 (816)
T 3qr0_A          232 EGIFKELSKNKGNITTV-MFRDFLNDMQRHPSLHKTLFPLYTDAQCEALINDYESAVNKKGKKKGQLTKEGLLYFLMCEE  310 (816)
T ss_dssp             HHHHHHHTTTSSSEEHH-HHHHHHHHTSSCTTSCTTTSCCCCHHHHHHHHHHHHHHHHGGGCBTTEECHHHHHHHHHSGG
T ss_pred             HHHHHHHccCCCCcccH-HHHHHHHHhCCccccccccccccCHHHHHHHHHHhccccchhhhccCCccHHHHHHHhhccc
Confidence            88999999999999999 9999997654 1               6778888876  5    789999999999998665


Q ss_pred             c
Q 014171          411 I  411 (429)
Q Consensus       411 ~  411 (429)
                      +
T Consensus       311 ~  311 (816)
T 3qr0_A          311 N  311 (816)
T ss_dssp             G
T ss_pred             c
Confidence            4

>3ox6_A Calcium-binding protein 1; EF-hand, calcium-sensor; 2.40A {Homo sapiens} PDB: 3ox5_A 2lan_A 2lap_A 2k7b_A 2k7c_A 2k7d_A

Probab=99.04  E-value=1.2e-09  Score=90.57  Aligned_cols=100  Identities=17%  Similarity=0.246  Sum_probs=78.3

Q ss_pred             hhccccccCCCCCCcccHHHHHHHHHhhCCCCc----cHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHH
Q 014171          273 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKL----KESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKW  348 (429)
Q Consensus       273 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~----~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~  348 (429)
                      +..+|..+|.+++|.|+.+||..++........    ....+..+|..+|.+++|.|+.+||..++.......  -.   
T Consensus        49 ~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~--~~---  123 (153)
T 3ox6_A           49 LIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQ--VG---  123 (153)
T ss_dssp             HHHHHHHHHTTSTTCCCHHHHHHHHHHHHTTCCHHHHCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHHSSC--CC---
T ss_pred             HHHHHHHhCCCCCccCcHHHHHHHHHHHhhccccccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhcCC--CC---
Confidence            555688889999999999999999865332222    246789999999999999999999998776522211  11   


Q ss_pred             HHHHHHHhccccCCCCCccCHHHHHhhhc
Q 014171          349 HLRSQAAFEKFDIDRDGFITPEELRMHTG  377 (429)
Q Consensus       349 ~~~l~~~F~~~D~~~~G~I~~~el~~~~~  377 (429)
                      ...+..+|+.+|.|++|.|+.+||..++.
T Consensus       124 ~~~~~~~~~~~d~~~dg~i~~~eF~~~~~  152 (153)
T 3ox6_A          124 HRDIEEIIRDVDLNGDGRVDFEEFVRMMS  152 (153)
T ss_dssp             HHHHHHHHHHHCSSSSSSBCHHHHHHHTC
T ss_pred             HHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence            23577899999999999999999998875

>3k21_A PFCDPK3, calcium-dependent protein kinase 3; calcium kinase structural genomics malaria, structural genom consortium, SGC, ATP-binding; 1.15A {Plasmodium falciparum} PDB: 3o4y_A

Probab=99.04  E-value=4.6e-10  Score=97.49  Aligned_cols=104  Identities=18%  Similarity=0.211  Sum_probs=81.3

Q ss_pred             hhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHH
Q 014171          271 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL  350 (429)
Q Consensus       271 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~  350 (429)
                      ..+..+|..+|.|++|.|+.+||..++...  .......+..+|..+|.|++|.|+.+||..++...... ..-+....+
T Consensus        87 ~~~~~l~~~~D~d~~g~i~~~EF~~~~~~~--~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~l~~~~~~-~~l~~~~~~  163 (191)
T 3k21_A           87 YNFDLLLDQIDSDGSGKIDYTEFIAAALDR--KQLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKK-GNITQRDVN  163 (191)
T ss_dssp             TTHHHHHHHHCTTCSSSEEHHHHHHHHSCG--GGCCHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHSSSC-SCCCHHHHH
T ss_pred             HHHHHHHHHhCCCCCCeEeHHHHHHHHHhh--hhccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcCCC-CCCCHhHHH
Confidence            456677999999999999999999988432  23567889999999999999999999999887542111 111111123


Q ss_pred             HHHHHhccccCCCCCccCHHHHHhhhc
Q 014171          351 RSQAAFEKFDIDRDGFITPEELRMHTG  377 (429)
Q Consensus       351 ~l~~~F~~~D~~~~G~I~~~el~~~~~  377 (429)
                      .+..+|+.+|.|++|.|+.+||..+++
T Consensus       164 ~~~~~~~~~D~d~dG~Is~~EF~~~~~  190 (191)
T 3k21_A          164 RVKRMIRDVDKNNDGKIDFHEFSEMMK  190 (191)
T ss_dssp             HHHHHHHHHCSSSSSSBCHHHHHHHHC
T ss_pred             HHHHHHHHhcCCCCCeECHHHHHHHHc
Confidence            578899999999999999999998875

>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A

Probab=99.04  E-value=4.5e-10  Score=87.75  Aligned_cols=98  Identities=16%  Similarity=0.153  Sum_probs=74.3

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHH
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR  351 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~  351 (429)
                      ++.++|..+|  ++|.|+.+||..++..   ......++..+|..+|.|++|.|+.+||..++...........   ...
T Consensus        10 e~~~l~~~~d--~~g~i~~~eF~~~~~~---~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~---~~~   81 (108)
T 2pvb_A           10 DVAAALAACS--AADSFKHKEFFAKVGL---ASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALT---DAE   81 (108)
T ss_dssp             HHHHHHHHTC--STTCCCHHHHHHHHTG---GGSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTSCCCC---HHH
T ss_pred             HHHHHHHHhC--CCCcCcHHHHHHHHhC---ChhHHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHhccCCCCC---HHH
Confidence            3455577777  7899999999998843   1345778999999999999999999999876654321011111   235


Q ss_pred             HHHHhccccCCCCCccCHHHHHhhhc
Q 014171          352 SQAAFEKFDIDRDGFITPEELRMHTG  377 (429)
Q Consensus       352 l~~~F~~~D~~~~G~I~~~el~~~~~  377 (429)
                      +..+|+.+|.|++|.|+.+||..++.
T Consensus        82 ~~~~~~~~D~~~dg~i~~~eF~~~~~  107 (108)
T 2pvb_A           82 TKAFLADGDKDGDGMIGVDEFAAMIK  107 (108)
T ss_dssp             HHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            77899999999999999999988764

>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=99.04  E-value=1.5e-10  Score=86.71  Aligned_cols=72  Identities=33%  Similarity=0.681  Sum_probs=64.5

Q ss_pred             hhcccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHH
Q 014171          261 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAA  333 (429)
Q Consensus       261 ~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~  333 (429)
                      +...+++++..+++++|..+|.+++|+|+.+||..++. .+|..++..++..++..+|.+++|.|+|+||+..
T Consensus        13 ~~~~l~~~~~~~~~~~F~~~D~d~~G~i~~~el~~~l~-~~~~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~   84 (87)
T 1s6j_A           13 MAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLK-RVGSELMESEIKDLMDAADIDKSGTIDYGEFIAA   84 (87)
T ss_dssp             SSSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHH-TTTSSCCHHHHHHHHHHHCTTCSSEECHHHHTTC
T ss_pred             HHHHCCHHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHH-HhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHH
Confidence            44556667778899999999999999999999999995 4899999999999999999999999999999753

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}

Probab=99.03  E-value=2e-10  Score=87.45  Aligned_cols=66  Identities=33%  Similarity=0.532  Sum_probs=59.9

Q ss_pred             HHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q 014171          269 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL  335 (429)
Q Consensus       269 ~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~  335 (429)
                      ..++++++|..+|.|++|+|+.+||..++.. +|..+++.+++.+++.+|.|++|.|+|+||+..+.
T Consensus        27 ~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~-~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~   92 (94)
T 2kz2_A           27 SEEEIREAFRVEDKDGNGYISAAELRHVMTN-LGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMT   92 (94)
T ss_dssp             CHHHHHHHHHHHCTTCCSCBCHHHHHHHHHH-HTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCcCcCCHHHHHHHHHH-hCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHh
Confidence            3457889999999999999999999999955 78889999999999999999999999999997653

>2bec_A Calcineurin B homologous protein 2; calcineurin-homologous protein, calcium-binding protein, NHE1 regulating protein; 2.70A {Homo sapiens}

Probab=99.03  E-value=5.9e-10  Score=97.57  Aligned_cols=107  Identities=14%  Similarity=0.138  Sum_probs=80.9

Q ss_pred             hhccccccCCCCCCcccHHHHHHHHHhhCC----------------CCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhh
Q 014171          273 LRDQFDAIDVDKNGSISLEEMRQALAKDLP----------------WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH  336 (429)
Q Consensus       273 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~----------------~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~  336 (429)
                      +..+|..+|.|++|.|+.+||..++.....                .......+..+|..+|.|++|.|+.+||..++..
T Consensus        63 ~~~l~~~~D~d~dg~i~~~EF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~  142 (202)
T 2bec_A           63 GDRIIESFFPDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKISRHEMLQVLRL  142 (202)
T ss_dssp             HHHHHHTTSCSSCCCCCHHHHHHHHGGGSCCCHHHHC-----CCCCTTSHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHhcccchhcccccccccccccccHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHH
Confidence            556788999999999999999999965443                3445678999999999999999999999988765


Q ss_pred             hhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC
Q 014171          337 VHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG  380 (429)
Q Consensus       337 ~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~  380 (429)
                      .... .-...+....+..+|+.+|.|++|.|+.+||..++...+
T Consensus       143 ~~g~-~~~~~~~~~~~~~~~~~~D~d~dG~Is~~EF~~~~~~~~  185 (202)
T 2bec_A          143 MVGV-QVTEEQLENIADRTVQEADEDGDGAVSFVEFTKSLEKMD  185 (202)
T ss_dssp             SCCS-CCCHHHHHHHHHHHHHHHCSSCSSSEEHHHHHHTTTTSC
T ss_pred             hcCC-CCCHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHhC
Confidence            4111 111111122234455559999999999999999887764

>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}

Probab=99.03  E-value=7.5e-10  Score=94.83  Aligned_cols=100  Identities=21%  Similarity=0.295  Sum_probs=68.2

Q ss_pred             hhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHH
Q 014171          273 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS  352 (429)
Q Consensus       273 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l  352 (429)
                      +.+++..+|.+++|.|+..||..++........+.+++...|+.+|.|++|.|+.+||..++........      ...+
T Consensus        49 ~~~~~~~~d~d~~~~i~~~ef~~~~~~~~~~~~~~~~l~~aF~~fD~d~~G~I~~~el~~~l~~~g~~~~------~~ei  122 (176)
T 2lhi_A           49 VNDLMNEIDVDGNHQIEFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLT------DAEV  122 (176)
T ss_dssp             HHHHHTTTCSSCSSSBCTTHHHHHHTSSCCSSHHHHHHHHHHHHHCSSCSSSBCHHHHHHHHHTTTCCCC------HHHH
T ss_pred             HHHHHHHhCcCCCccchHHHHHHHHHHhcccCCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCcccc------hHHH
Confidence            4455777788888888888887777543434445567788888888888888888888776643322111      1245


Q ss_pred             HHHhccccCCCCCccCHHHHHhhhcCC
Q 014171          353 QAAFEKFDIDRDGFITPEELRMHTGLK  379 (429)
Q Consensus       353 ~~~F~~~D~~~~G~I~~~el~~~~~~~  379 (429)
                      ..+|+.+| |+||.|+.+||.++++..
T Consensus       123 ~~l~~~~d-d~dG~I~~~EF~~~m~k~  148 (176)
T 2lhi_A          123 DDMLREVS-DGSGEINIQQFAALLSKG  148 (176)
T ss_dssp             HHHHHHHH-TTSSCBCTTHHHHHHTCC
T ss_pred             HHHHHhhc-CCCCeEeHHHHHHHHHhc
Confidence            66777777 888888888888877543

>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}

Probab=99.02  E-value=2.1e-10  Score=82.16  Aligned_cols=59  Identities=44%  Similarity=0.701  Sum_probs=54.2

Q ss_pred             HHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          350 LRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       350 ~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                      ..++.+|+.+|+|++|+|+.+||+.++...+.      +..++..+|.|++|.|+|+||+.++.+
T Consensus         6 ~~l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~eF~~~~~~   70 (71)
T 2b1u_A            6 EDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFARMLAQ   70 (71)
T ss_dssp             HHHHHHHTTSCCSSSSEEEHHHHHHHGGGTTCSSCHHHHHHHHHHCCSSSSSEEETTHHHHHHTC
T ss_pred             HHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhh
Confidence            46888999999999999999999999988873      888999999999999999999999864

>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}

Probab=99.02  E-value=3.1e-10  Score=86.43  Aligned_cols=59  Identities=34%  Similarity=0.572  Sum_probs=54.1

Q ss_pred             HHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          350 LRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       350 ~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                      ..++++|+.||+|++|+|+.+||+.++...+.      ++.++..+|.|+||.|+|+||+.++..
T Consensus        29 ~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~e~~~l~~~~D~d~dG~I~~~EF~~~~~~   93 (94)
T 2kz2_A           29 EEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA   93 (94)
T ss_dssp             HHHHHHHHHHCTTCCSCBCHHHHHHHHHHHTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred             HHHHHHHHHHCCCCcCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHhc
Confidence            46889999999999999999999999987763      889999999999999999999999874

>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A

Probab=99.02  E-value=1.5e-10  Score=89.96  Aligned_cols=71  Identities=20%  Similarity=0.368  Sum_probs=60.2

Q ss_pred             hHHHhhhhccccccC-CCCC-CcccHHHHHHHHHhhCCCCc-cHHHHHHHHHHhcCCCCCcccHHHHHHHHhhh
Q 014171          267 DEELADLRDQFDAID-VDKN-GSISLEEMRQALAKDLPWKL-KESRVLEILQAIDCNTDGLVDFSEFVAATLHV  337 (429)
Q Consensus       267 ~~~~~~l~~~F~~~D-~~~~-G~i~~~el~~~l~~~~~~~~-~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~  337 (429)
                      +.++.+++++|+.|| .|++ |+|+.+||..+|...+|... +..+++++++.+|.|++|.|+|+||+.++...
T Consensus        18 e~~~~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~~~~ev~~li~~~D~d~dG~Idf~EF~~~~~~~   91 (106)
T 2h2k_A           18 EESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGEL   91 (106)
T ss_dssp             HHHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTTTCCCHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHH
Confidence            455678999999999 7986 79999999999965577544 34789999999999999999999999887654

>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5

Probab=99.02  E-value=2e-10  Score=81.17  Aligned_cols=57  Identities=30%  Similarity=0.518  Sum_probs=52.6

Q ss_pred             HHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          352 SQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       352 l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                      ++.+|+.+|+|++|+|+.+||+.++...+.      +..++..+|.|++|.|+|+||+.++.+
T Consensus         3 l~~~F~~~D~d~~G~i~~~el~~~l~~~~~~~~~~~~~~~~~~~D~~~dg~i~~~ef~~~~~~   65 (67)
T 1tiz_A            3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEK   65 (67)
T ss_dssp             HHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHT
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH
Confidence            567999999999999999999999987763      888999999999999999999999875

>1rwy_A Parvalbumin alpha; EF-hand, calcium-binding, calcium-binding protein; HET: PG4; 1.05A {Rattus norvegicus} SCOP: a.39.1.4 PDB: 1rtp_1* 2jww_A 3f45_A 1s3p_A 1xvj_A 1rjv_A 1rk9_A 1g33_A

Probab=99.02  E-value=6e-10  Score=87.16  Aligned_cols=103  Identities=17%  Similarity=0.189  Sum_probs=77.6

Q ss_pred             cchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccc
Q 014171          265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD  344 (429)
Q Consensus       265 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~  344 (429)
                      +++++   +.++|..+|  ++|.|+.+||..++..   ......++..+|..+|.|++|.|+.+||..++..........
T Consensus         6 ~t~~e---~~~~~~~~d--~~g~i~~~eF~~~~~~---~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~   77 (109)
T 1rwy_A            6 LSAED---IKKAIGAFT--AADSFDHKKFFQMVGL---KKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDL   77 (109)
T ss_dssp             SCHHH---HHHHHHTTC--STTCCCHHHHHHHHTG---GGSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCC
T ss_pred             CCHHH---HHHHHHHcC--CCCcEeHHHHHHHHhc---CcchHHHHHHHHHHHCCCCCCeEcHHHHHHHHHHHhccCCCC
Confidence            34454   445567777  8899999999998832   134578899999999999999999999998776542101111


Q ss_pred             cHHHHHHHHHHhccccCCCCCccCHHHHHhhhcC
Q 014171          345 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL  378 (429)
Q Consensus       345 ~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~  378 (429)
                      .   ...+..+|+.+|.|++|.|+.+||..++..
T Consensus        78 ~---~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~  108 (109)
T 1rwy_A           78 S---AKETKTLMAAGDKDGDGKIGVEEFSTLVAE  108 (109)
T ss_dssp             C---HHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred             C---HHHHHHHHHHHCCCCCCcCCHHHHHHHHHc
Confidence            1   235778999999999999999999987753

>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}

Probab=99.02  E-value=5e-10  Score=88.03  Aligned_cols=64  Identities=20%  Similarity=0.358  Sum_probs=55.7

Q ss_pred             HHHHHHHhccccCCCCCccCHHHHHhhhcCCC----CHHHHHHHhCCCCCCcccHHHHHHHHHhcccc
Q 014171          349 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTASIS  412 (429)
Q Consensus       349 ~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~----~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~~  412 (429)
                      ...++.+|+.||+|++|+|+.+||+.++...+    ++..++..+|.|+||.|+|+||+.+|......
T Consensus        13 ~~~l~~~F~~~D~d~dG~I~~~El~~~l~~~~~~~~~~~~i~~~~D~d~dG~I~~~EF~~~~~~~~~~   80 (111)
T 2kgr_A           13 RLKYRQLFNSHDKTMSGHLTGPQARTILMQSSLPQAQLASIWNLSDIDQDGKLTAEEFILAMHLIDVA   80 (111)
T ss_dssp             HHHHHHHHHTTSCSSCCEEEHHHHHHHHHTTCCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHhCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHHHH
Confidence            35688999999999999999999999998443    38889999999999999999999999765543

>2h2k_A Protein S100-A13; calcium binding protein, metal binding protein; 2.00A {Homo sapiens} PDB: 1yur_A 1yus_A 1yut_A 1yuu_A 2egd_A 2k8m_B 2ki4_B* 2ki6_C* 2kot_A* 2l5x_B 2cxj_A

Probab=99.02  E-value=3.5e-10  Score=87.82  Aligned_cols=62  Identities=18%  Similarity=0.325  Sum_probs=53.9

Q ss_pred             HHHHHHHhcccc-CCCC-CccCHHHHHhhhcC-C-------CCHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          349 HLRSQAAFEKFD-IDRD-GFITPEELRMHTGL-K-------GSIDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       349 ~~~l~~~F~~~D-~~~~-G~I~~~el~~~~~~-~-------~~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      ...++++|+.|| +|++ |+|+.+||+.+++. .       .++++++..+|.|+||.|+|+||+.+|....
T Consensus        21 ~~~l~~aF~~fD~~dg~~G~Is~~EL~~~l~~~lg~~~~~~~ev~~li~~~D~d~dG~Idf~EF~~~~~~~~   92 (106)
T 2h2k_A           21 IETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGELA   92 (106)
T ss_dssp             HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCTTTTTTCCCHHHHHHHHCTTCSSSEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCCCCCEECHHHHHHHHHHHcCcCCCCHHHHHHHHHHHCCCCCCCCcHHHHHHHHHHHH
Confidence            356899999999 7986 79999999998853 2       2599999999999999999999999997654

>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}

Probab=99.02  E-value=5.5e-10  Score=87.23  Aligned_cols=68  Identities=15%  Similarity=0.388  Sum_probs=63.2

Q ss_pred             hHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q 014171          267 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL  335 (429)
Q Consensus       267 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~  335 (429)
                      +++..+++.+|..+|.|++|+|+.+||..++.. +|..++..++..++..+|.|++|.|+|+||+..+.
T Consensus        28 ~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~-~g~~~~~~~~~~l~~~~D~d~dg~i~~~eF~~~~~   95 (107)
T 2d58_A           28 PSKLEGFKEKYMEFDLNGNGDIDIMSLKRMLEK-LGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMML   95 (107)
T ss_dssp             HHHHHHHHHHHTTSCCCTTSCEEHHHHHHHHHH-TTCCCCHHHHHHHHHHHCSSSSSEECHHHHHHHHS
T ss_pred             HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence            677788999999999999999999999999954 89999999999999999999999999999998764

>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6

Probab=99.01  E-value=1.9e-10  Score=88.43  Aligned_cols=67  Identities=16%  Similarity=0.187  Sum_probs=59.8

Q ss_pred             HHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhh
Q 014171          268 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV  337 (429)
Q Consensus       268 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~  337 (429)
                      ++.++++++|+.+|.|++|+|+.+|+..+|.. +|  .++.++.++++.+|.|++|.|+|+||+.++...
T Consensus         8 ~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~-~~--l~~~~l~~i~~~~D~d~dG~i~~~EF~~~~~~~   74 (99)
T 1qjt_A            8 SGNPVYEKYYRQVEAGNTGRVLALDAAAFLKK-SG--LPDLILGKIWDLADTDGKGVLSKQEFFVALRLV   74 (99)
T ss_dssp             TTCTHHHHHHHHHCCTTSSCCCSHHHHHHHHT-SS--SCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHCCCCCCcCCHHHHHHHHHH-cC--CCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHH
Confidence            45678899999999999999999999999955 55  678999999999999999999999999887654

>1s6i_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5

Probab=99.01  E-value=7.1e-10  Score=96.03  Aligned_cols=97  Identities=21%  Similarity=0.254  Sum_probs=80.0

Q ss_pred             HHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC------C
Q 014171          308 SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------S  381 (429)
Q Consensus       308 ~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~------~  381 (429)
                      .++.++|..+|.|++|.|+++||..++.......   .   ...+..+|+.+|.|++|.|+.+||..++....      .
T Consensus        10 ~~l~~~F~~~D~d~dG~I~~~E~~~~l~~~g~~~---~---~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~~~~~~~~   83 (188)
T 1s6i_A           10 GGLKELFKMIDTDNSGTITFDELKDGLKRVGSEL---M---ESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREEN   83 (188)
T ss_dssp             CSHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCCC---C---HHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCCCS
T ss_pred             HHHHHHHHHHCCCCCCcCCHHHHHHHHHHcCCCC---C---HHHHHHHHHHcCCCCCCeEeHHHHHHHHHHHhccCHHHH
Confidence            3578899999999999999999998765442111   1   13577899999999999999999998876542      4


Q ss_pred             HHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          382 IDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       382 ~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      +..+|..+|.|++|.|+.+||..+++...
T Consensus        84 l~~~F~~~D~d~dG~Is~~El~~~l~~~g  112 (188)
T 1s6i_A           84 LVSAFSYFDKDGSGYITLDEIQQACKDFG  112 (188)
T ss_dssp             THHHHHHTTTTCSSEEEHHHHHHTTTTTT
T ss_pred             HHHHHHHHCCCCCCcCcHHHHHHHHHHcC
Confidence            89999999999999999999999987543

>3rm1_A Protein S100-B; alpha-helical, EF hand, metal binding protein-protein bindin; 1.24A {Bos taurus} PDB: 3rlz_A 1cfp_A 3cr2_A 3cr4_X* 3cr5_X* 3gk1_A* 3gk2_A* 3gk4_X* 3iqo_A 3iqq_A 3lle_A* 1psb_A 3czt_X 2h61_A 3d0y_A* 3d10_A* 3hcm_A* 3lk1_A* 3lk0_A* 1b4c_A ...

Probab=99.01  E-value=4.9e-10  Score=84.91  Aligned_cols=61  Identities=20%  Similarity=0.364  Sum_probs=53.8

Q ss_pred             HHHHHHHhccccCCCCC---ccCHHHHHhhhcC-----CCC------HHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          349 HLRSQAAFEKFDIDRDG---FITPEELRMHTGL-----KGS------IDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       349 ~~~l~~~F~~~D~~~~G---~I~~~el~~~~~~-----~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      ...++.+|+.|| +++|   +|+.+||+.+++.     +|.      ++.+++.+|.|+||.|+|+||+.+|.+..
T Consensus         8 ~~~l~~~F~~~D-~~dG~~g~Is~~EL~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~l~   82 (92)
T 3rm1_A            8 VVALIDVFHQYS-GREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFVAMIT   82 (92)
T ss_dssp             HHHHHHHHHHHH-TSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHc-cCCCCcCeECHHHHHHHHHHHhhhhccCcccHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence            456889999999 7666   9999999999987     652      89999999999999999999999997654

>1iq3_A Ralbp1-interacting protein (partner of ralbp1); EF-hand domain, POB1 EH domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: a.39.1.6

Probab=99.01  E-value=6.9e-11  Score=92.65  Aligned_cols=70  Identities=23%  Similarity=0.285  Sum_probs=61.7

Q ss_pred             cchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhh
Q 014171          265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV  337 (429)
Q Consensus       265 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~  337 (429)
                      +++++..+++++|+.+|.|++|+|+.+|+..+|.. +|  ++++++.++++.+|.|++|.|+|+||+.++...
T Consensus        16 ls~~~~~~~~~~F~~~D~d~dG~Is~~el~~~l~~-~g--l~~~el~~i~~~~D~d~dG~I~~~EF~~~m~~~   85 (110)
T 1iq3_A           16 ITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTK-SK--LSIPELSYIWELSDADCDGALTLPEFCAAFHLI   85 (110)
T ss_dssp             CSSSSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCS-SS--CSSCCHHHHHHHHCSSSCSEEEHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCeEcHHHHHHHHHH-cC--CCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence            45677888999999999999999999999999944 55  567789999999999999999999999887654

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=99.01  E-value=6.3e-11  Score=113.26  Aligned_cols=74  Identities=18%  Similarity=0.198  Sum_probs=57.6

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCC-------CCEE
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED-------SSLK  109 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~-------~~~k  109 (429)
                      ...++|||||.|++|....        ....+..++.||+.+|.|||++|||||||||.|||++..++.       ..+.
T Consensus       184 ~~~~LVME~i~G~~L~~l~--------~~~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd~~d~~~~~~~~~  255 (397)
T 4gyi_A          184 SRHTIVMSLVDALPMRQVS--------SVPDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKDAEDPSSITLTPI  255 (397)
T ss_dssp             ETTEEEEECCSCEEGGGCC--------CCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEECSSCTTSEEEEEE
T ss_pred             cCceEEEEecCCccHhhhc--------ccHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCCcccccccccceE
Confidence            3457999999999886532        122456788999999999999999999999999999853211       1378


Q ss_pred             Eeeccccee
Q 014171          110 ATDFGLSDF  118 (429)
Q Consensus       110 L~Dfg~a~~  118 (429)
                      ++||+-+..
T Consensus       256 iID~~Q~V~  264 (397)
T 4gyi_A          256 IIXFPQMVS  264 (397)
T ss_dssp             ECCCTTCEE
T ss_pred             EEEeCCccc
Confidence            999987654

>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7

Probab=99.01  E-value=3.3e-10  Score=88.11  Aligned_cols=80  Identities=19%  Similarity=0.262  Sum_probs=62.7

Q ss_pred             cccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcc
Q 014171          324 LVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRI  397 (429)
Q Consensus       324 ~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i  397 (429)
                      .++++++...+.......       ...++.+|+.||+|++|+|+.+||+.++...+.      +..++..+|.|++|.|
T Consensus         5 ~~~~~~~~~~l~~~~~~~-------~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~e~~~l~~~~d~~~~g~i   77 (105)
T 1wlz_A            5 ATADRDILARLHKAVTSH-------YHAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRL   77 (105)
T ss_dssp             TTCCHHHHHHHHHHHHHT-------HHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCB
T ss_pred             chhHHHHHHHHHHHHHch-------HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCCC
Confidence            356777766544332111       246889999999999999999999999987763      8889999999999999


Q ss_pred             cHHHHHHHHHhcc
Q 014171          398 SLSEFRRLLRTAS  410 (429)
Q Consensus       398 ~~~ef~~~~~~~~  410 (429)
                      +|+||+.++....
T Consensus        78 ~~~eF~~~~~~~~   90 (105)
T 1wlz_A           78 KYPDFLSRFSSET   90 (105)
T ss_dssp             CHHHHHHHHC---
T ss_pred             cHHHHHHHHhccC
Confidence            9999999998754

>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A

Probab=99.01  E-value=9.3e-10  Score=86.23  Aligned_cols=99  Identities=19%  Similarity=0.281  Sum_probs=75.2

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHH
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR  351 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~  351 (429)
                      ++.++|..+|  ++|.|+.+||..++.  . ......++..+|..+|.|++|.|+.+||..++..........+   ...
T Consensus        11 e~~~~~~~~d--~~g~i~~~ef~~~~~--~-~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~~~---~~~   82 (110)
T 1pva_A           11 DIKKALDAVK--AEGSFNHKKFFALVG--L-KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLT---DAE   82 (110)
T ss_dssp             HHHHHHHHTC--STTCCCHHHHHHHHT--C-TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCC---HHH
T ss_pred             HHHHHHHhcC--CCCcCcHHHHHHHHc--c-CcchHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHhhcCCCCC---HHH
Confidence            3455566677  889999999999883  2 2345778999999999999999999999876654421011111   235


Q ss_pred             HHHHhccccCCCCCccCHHHHHhhhcC
Q 014171          352 SQAAFEKFDIDRDGFITPEELRMHTGL  378 (429)
Q Consensus       352 l~~~F~~~D~~~~G~I~~~el~~~~~~  378 (429)
                      +..+|+.+|.|++|.|+.+||..++..
T Consensus        83 ~~~~~~~~d~~~dg~i~~~eF~~~~~~  109 (110)
T 1pva_A           83 TKAFLKAADKDGDGKIGIDEFETLVHE  109 (110)
T ss_dssp             HHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred             HHHHHHHhCCCCCCeEcHHHHHHHHHh
Confidence            778999999999999999999987753

>2l4h_A Calcium and integrin-binding protein 1; metal binding protei; NMR {Homo sapiens} PDB: 2l4i_A 2lm5_A

Probab=99.00  E-value=6e-10  Score=98.65  Aligned_cols=106  Identities=14%  Similarity=0.134  Sum_probs=81.3

Q ss_pred             ccccccCCCCCCc-ccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhh---cccccHHHHH
Q 014171          275 DQFDAIDVDKNGS-ISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL---EEHDSEKWHL  350 (429)
Q Consensus       275 ~~F~~~D~~~~G~-i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~---~~~~~~~~~~  350 (429)
                      ++|..+|.|++|. |+.+||..++..........+.+..+|..+|.|++|.|+.+||..++......   ..-...+...
T Consensus        95 ~lf~~~D~d~dG~~I~f~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~dG~Is~~El~~~l~~~~~~~~~~~~s~~e~~~  174 (214)
T 2l4h_A           95 RICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQ  174 (214)
T ss_dssp             HHHHHHCCSSSCCSEEHHHHHHHHHHTSSCSCHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHHHHSSSCTTCSCTHHHH
T ss_pred             HHHHHhCcCCCCCEecHHHHHHHHHHHcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhccccCCCCCHHHHHH
Confidence            3577789999999 99999999996644334456789999999999999999999999887655320   0111122223


Q ss_pred             HHHHHhccccCCCCCccCHHHHHhhhcCCC
Q 014171          351 RSQAAFEKFDIDRDGFITPEELRMHTGLKG  380 (429)
Q Consensus       351 ~l~~~F~~~D~~~~G~I~~~el~~~~~~~~  380 (429)
                      .+..+|+.+|.|++|.|+.+||..++....
T Consensus       175 ~~~~~~~~~D~d~dG~Is~~EF~~~~~~~p  204 (214)
T 2l4h_A          175 LIDNILEESDIDRDGTINLSEFQHVISRSP  204 (214)
T ss_dssp             HHHHHHHHHCCSCCSSBCSHHHHHHHHTCH
T ss_pred             HHHHHHHHhCCCCCCcCCHHHHHHHHHhCh
Confidence            345689999999999999999999887653

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}

Probab=99.00  E-value=1.1e-10  Score=82.44  Aligned_cols=62  Identities=27%  Similarity=0.378  Sum_probs=56.2

Q ss_pred             hhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q 014171          273 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL  335 (429)
Q Consensus       273 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~  335 (429)
                      ++++|+.+|.|++|+|+.+||..++.. +|..++..++..++..+|.|++|.|+|+||+..+.
T Consensus         2 l~~~F~~~D~d~~G~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~   63 (66)
T 3li6_A            2 AEALFKEIDVNGDGAVSYEEVKAFVSK-KRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYG   63 (66)
T ss_dssp             CCHHHHHHCTTCSSSCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHT
T ss_pred             HHHHHHHHCCCCCCcccHHHHHHHHHH-ccCCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
Confidence            467899999999999999999999955 67788889999999999999999999999998664

>3pm8_A PFCDPK2, calcium-dependent protein kinase 2; malaria, structural genomics, structural genomics CONS SGC; 2.00A {Plasmodium falciparum K1}

Probab=99.00  E-value=4.3e-10  Score=98.23  Aligned_cols=96  Identities=19%  Similarity=0.228  Sum_probs=70.7

Q ss_pred             HHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC------C
Q 014171          308 SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------S  381 (429)
Q Consensus       308 ~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~------~  381 (429)
                      .++.++|..+|.|++|.|+++||..++........      ...+..+|+.+|.|++|.|+.+||..++....      .
T Consensus        57 ~~l~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~------~~~~~~l~~~~D~d~~g~I~~~EF~~~~~~~~~~~~~~~  130 (197)
T 3pm8_A           57 NNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKI------PPDIHQVLRDIDSNASGQIHYTDFLAATIDKQTYLKKEV  130 (197)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHHC----------CHHHHHHHHC-------CEEHHHHHHTTCCHHHHCSHHH
T ss_pred             HHHHHHHHHHCCCCCCcCCHHHHHHHHHHhCCCCC------HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHHhhhhHHH
Confidence            45688999999999999999999987765422111      23577899999999999999999998775543      3


Q ss_pred             HHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          382 IDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       382 ~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                      +..+|+.+|.|++|.|+.+||..+++..
T Consensus       131 l~~~F~~~D~d~~G~Is~~El~~~l~~~  158 (197)
T 3pm8_A          131 CLIPFKFFDIDGNGKISVEELKRIFGRD  158 (197)
T ss_dssp             HHHHHHHHCTTCSSEECHHHHHHHHC--
T ss_pred             HHHHHHHHCCCCCCCCCHHHHHHHHHhc
Confidence            7889999999999999999999999865

>2wcb_A Protein S100-A12; calcium signalling, HOST-parasite response, metal binding PR; 1.73A {Homo sapiens} PDB: 1odb_A* 2wc8_A 2wcf_A 2wce_A 1e8a_A 1gqm_A

Probab=99.00  E-value=1.1e-10  Score=89.10  Aligned_cols=70  Identities=27%  Similarity=0.400  Sum_probs=60.7

Q ss_pred             hHHHhhhhccccccC-CCCCC-cccHHHHHHHHHhh----CCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhh
Q 014171          267 DEELADLRDQFDAID-VDKNG-SISLEEMRQALAKD----LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH  336 (429)
Q Consensus       267 ~~~~~~l~~~F~~~D-~~~~G-~i~~~el~~~l~~~----~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~  336 (429)
                      ++++.+++++|+.+| .|++| +|+.+||..+|...    +|..+++.+++.+++.+|.|++|.|+|+||+.++..
T Consensus         8 e~~~~~l~~~F~~fD~~dg~gg~I~~~El~~~l~~~~~~~lg~~~~~~~v~~~~~~~D~d~dG~I~f~EF~~~~~~   83 (95)
T 2wcb_A            8 EEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAI   83 (95)
T ss_dssp             HHHHHHHHHHHHHHHTSSSSTTEEEHHHHHHHHHHHTHHHHHHCCCHHHHHHHHTTSSSSTTSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhccCCCCCccCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH
Confidence            455678999999999 89998 99999999999643    345678899999999999999999999999987653

>1rro_A RAT oncomodulin; calcium-binding protein; 1.30A {Rattus rattus} SCOP: a.39.1.4 PDB: 1omd_A 2nln_A 1ttx_A

Probab=99.00  E-value=8.1e-10  Score=86.28  Aligned_cols=103  Identities=17%  Similarity=0.219  Sum_probs=76.6

Q ss_pred             ccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhccc
Q 014171          264 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH  343 (429)
Q Consensus       264 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~  343 (429)
                      .++++++   .++|..+|  ++|.|+.+||..++..   ......++..+|..+|.|++|.|+.+||..++.........
T Consensus         5 ~~t~~e~---~~~~~~~d--~~g~i~~~eF~~~~~~---~~~~~~~l~~~F~~~D~d~~G~I~~~el~~~l~~~~~~g~~   76 (108)
T 1rro_A            5 ILSAEDI---AAALQECQ--DPDTFEPQKFFQTSGL---SKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARE   76 (108)
T ss_dssp             TSCHHHH---HHHHHHTC--STTCCCHHHHHHHHSG---GGSCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCC
T ss_pred             cCCHHHH---HHHHHHcc--CCCCcCHHHHHHHHhc---CcccHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhccCC
Confidence            3455554   44566667  8899999999988832   13456789999999999999999999998766543210111


Q ss_pred             ccHHHHHHHHHHhccccCCCCCccCHHHHHhhhc
Q 014171          344 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG  377 (429)
Q Consensus       344 ~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~  377 (429)
                      ..   ...+..+|+.+|.|++|.|+.+||..++.
T Consensus        77 ~~---~~~~~~~~~~~D~~~dg~i~~~eF~~~~~  107 (108)
T 1rro_A           77 LT---ESETKSLMDAADNDGDGKIGADEFQEMVH  107 (108)
T ss_dssp             CC---HHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred             CC---HHHHHHHHHHhCCCCCCcCcHHHHHHHHc
Confidence            11   23577899999999999999999998775

>2aao_A CDPK, calcium-dependent protein kinase, isoform AK1; calmodulin-like domain, EF calcium binding protein, transferase; 2.00A {Arabidopsis thaliana}

Probab=99.00  E-value=1.1e-09  Score=92.48  Aligned_cols=97  Identities=20%  Similarity=0.206  Sum_probs=78.3

Q ss_pred             HHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC------C
Q 014171          308 SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------S  381 (429)
Q Consensus       308 ~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~------~  381 (429)
                      ..+..+|..+|.|++|.|+++||..++.......   .   ...+..+|+.+|.|++|.|+.+||..++....      .
T Consensus        27 ~~l~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~---~---~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~  100 (166)
T 2aao_A           27 AGLKEMFNMIDADKSGQITFEELKAGLKRVGANL---K---ESEILDLMQAADVDNSGTIDYKEFIAATLHLNKIEREDH  100 (166)
T ss_dssp             HHHHHHHHHHCTTCCSSBCHHHHHHHGGGGTCCC---C---HHHHHHHHHHHCTTCCSSBCHHHHHHHHTTCHHHHTTHH
T ss_pred             HHHHHHHHHhCCCCCCeEeHHHHHHHHHHhCCCC---C---HHHHHHHHHHhCCCCCCeEcHHHHHHHHHHHhhcccHHH
Confidence            3567899999999999999999998765432111   1   13477899999999999999999998876542      3


Q ss_pred             HHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          382 IDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       382 ~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      +..+|..+|.|++|.|+.+||..+++...
T Consensus       101 ~~~~F~~~D~d~~G~i~~~e~~~~l~~~~  129 (166)
T 2aao_A          101 LFAAFTYFDKDGSGYITPDELQQACEEFG  129 (166)
T ss_dssp             HHHHHHHHCTTCSSSBCHHHHHHHTCC--
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHcC
Confidence            78899999999999999999999988654

>1eh2_A EPS15; calcium binding, signaling domain, NPF binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6 PDB: 2jxc_A 1f8h_A 1ff1_A

Probab=99.00  E-value=7.4e-10  Score=85.99  Aligned_cols=61  Identities=20%  Similarity=0.302  Sum_probs=54.8

Q ss_pred             HHHHHHHhccccCCCCCccCHHHHHhhhcCCC----CHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          349 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       349 ~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~----~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      ...++++|+.||+ ++|+|+.+|++.++...|    ++.+++..+|.|+||.|+|+||+.+|....
T Consensus        14 ~~~~~~~F~~~D~-~dG~Is~~el~~~l~~~gl~~~el~~i~~~~D~d~dG~id~~EF~~~m~~~~   78 (106)
T 1eh2_A           14 KAKYDAIFDSLSP-VNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEFAVAMFLVY   78 (106)
T ss_dssp             HHHHHHHHTTSCC-SSSCCBHHHHHHHHHTTTCCHHHHHHHHHHHCSSCSSBCCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHhCC-CCCeEcHHHHHHHHHHcCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHH
Confidence            3568899999999 999999999999998887    388899999999999999999999986544

>3sg6_A Gcamp2, myosin light chain kinase, green fluorescent PROT calmodulin chimera; calcium sensor, fluorescent protein; HET: CRO; 1.70A {Gallus gallus} PDB: 3evu_A* 3ek4_A* 3ek7_A* 3evv_A* 3ek8_A* 3ekh_A* 3sg2_A* 3sg3_A* 3sg7_A* 3ekj_A* 3sg4_A* 3sg5_A* 3evr_A* 3o78_A* 3o77_A* 1trf_A

Probab=99.00  E-value=4.3e-10  Score=109.29  Aligned_cols=127  Identities=20%  Similarity=0.247  Sum_probs=96.3

Q ss_pred             ccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHh
Q 014171          277 FDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAF  356 (429)
Q Consensus       277 F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F  356 (429)
                      ++.+|.+.+|.+...++.......+. .....++.++|..+|.|++|.|+.+||..++.......   .   ...+..+|
T Consensus       282 ~k~iD~de~g~i~~~e~~~~~~~~ls-~eei~el~~~F~~fD~D~dG~Is~~EL~~~L~~lg~~~---s---~eel~~Lf  354 (450)
T 3sg6_A          282 LKGIDFKEDGNILGHKLEYNTRDQLT-EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP---T---EAELQDMI  354 (450)
T ss_dssp             EEEESCCTTSTTTTTCBCCC---CCC-HHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCC---C---HHHHHHHH
T ss_pred             cccCCccccccchhhhhhhhhcccCC-HHHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCC---C---HHHHHHHH
Confidence            45578899999988776543211111 11235788899999999999999999998775432211   1   24577899


Q ss_pred             ccccCCCCCccCHHHHHhhhcCCC-------CHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          357 EKFDIDRDGFITPEELRMHTGLKG-------SIDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       357 ~~~D~~~~G~I~~~el~~~~~~~~-------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      +.+|.|++|.|+.+||..++....       .+..+|+.+|.|++|.|+.+||..+++...
T Consensus       355 ~~~D~DgdG~IsfeEFl~ll~~~~~~~~~~e~l~~aFk~fD~D~dG~Is~eELr~~L~~lG  415 (450)
T 3sg6_A          355 NEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG  415 (450)
T ss_dssp             HTTCTTSSSSEEHHHHHHHHHC------CHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHT
T ss_pred             HHhccCCCCcccHHHHHHHHHhhccccchhhHHHHHHHHhCCCCCCeEeHHHHHHHHHHhC
Confidence            999999999999999999887543       278899999999999999999999998754

>1j55_A S-100P protein; metal binding protein; 2.00A {Homo sapiens} SCOP: a.39.1.2 PDB: 1ozo_A

Probab=98.99  E-value=5e-10  Score=85.37  Aligned_cols=62  Identities=19%  Similarity=0.310  Sum_probs=53.0

Q ss_pred             HHHHHHHhcccc-CCC-CCccCHHHHHhhhcC-----CC------CHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          349 HLRSQAAFEKFD-IDR-DGFITPEELRMHTGL-----KG------SIDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       349 ~~~l~~~F~~~D-~~~-~G~I~~~el~~~~~~-----~~------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      ...++++|+.|| +|+ +|+|+.+||+.+++.     +|      +++.++..+|.|+||.|+|+||+.+|.+..
T Consensus         8 ~~~l~~~F~~fD~~dgd~G~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~~   82 (95)
T 1j55_A            8 MGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAAIT   82 (95)
T ss_dssp             HHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccCCCCCcCCHHHHHHHHHHHhHhhcccccCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHH
Confidence            356889999999 788 589999999999864     23      389999999999999999999999997643

>2y5i_A S100Z, S100 calcium binding protein Z; metal-binding protein, EF-hand, calcium regulation, oligomer neuronal development, spine2; 2.03A {Danio rerio}

Probab=98.99  E-value=4.9e-10  Score=86.08  Aligned_cols=62  Identities=16%  Similarity=0.273  Sum_probs=53.9

Q ss_pred             HHHHHHHhcccc-CCCCC-ccCHHHHHhhhcC-----CC------CHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          349 HLRSQAAFEKFD-IDRDG-FITPEELRMHTGL-----KG------SIDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       349 ~~~l~~~F~~~D-~~~~G-~I~~~el~~~~~~-----~~------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      ...++++|+.|| +|++| +|+.+||+.+++.     +|      +++.++..+|.|+||.|+|+||+.+|.+..
T Consensus         9 ~~~l~~~F~~fDd~dg~gG~I~~~El~~~l~~~~~~~lg~~~~~~~v~~l~~~~D~d~dG~I~f~EF~~~~~~~~   83 (99)
T 2y5i_A            9 MDALITVFHNYSGSEGDKYKLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAALT   83 (99)
T ss_dssp             HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSGGGGTTSCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHhhhhccccccHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHH
Confidence            356889999997 89998 9999999999874     33      389999999999999999999999997653

>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A

Probab=98.99  E-value=7.2e-10  Score=83.54  Aligned_cols=62  Identities=32%  Similarity=0.487  Sum_probs=56.2

Q ss_pred             HHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          349 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       349 ~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      ...++.+|+.||+|++|+|+.+||+.++...|.      +..++..+|.|++|.|+|+||+.++....
T Consensus        19 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~D~~~dg~i~~~eF~~~~~~~~   86 (90)
T 1avs_A           19 IAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQM   86 (90)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHHh
Confidence            456889999999999999999999999987763      88999999999999999999999998654

>2kax_A Protein S100-A5; EF-hand, calcium binding protien, calcium, polymorphism, structural genomics, spine2, structural proteomics in europe, spine; NMR {Homo sapiens} PDB: 2kay_A

Probab=98.98  E-value=2.5e-10  Score=86.60  Aligned_cols=70  Identities=21%  Similarity=0.412  Sum_probs=60.9

Q ss_pred             hHHHhhhhccccccC-CCCCC-cccHHHHHHHHHhhCC--CCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhh
Q 014171          267 DEELADLRDQFDAID-VDKNG-SISLEEMRQALAKDLP--WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV  337 (429)
Q Consensus       267 ~~~~~~l~~~F~~~D-~~~~G-~i~~~el~~~l~~~~~--~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~  337 (429)
                      ++++.+++++|+.+| .|++| +|+.+||..++....+  . +++.+++.+++.+|.|++|.|+|+||+.++...
T Consensus         6 ~~~~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~~~~~-~~~~~i~~~~~~~D~d~dG~I~f~EF~~~~~~~   79 (92)
T 2kax_A            6 EKALTTMVTTFHKYSGREGSKLTLSRKELKELIKKELCLGE-MKESSIDDLMKSLDKNSDQEIDFKEYSVFLTML   79 (92)
T ss_dssp             HHHHHHHHHHHHHHHTTSSCSSEEEHHHHHHHHHHHSCCTT-TCCTTHHHHHHHHTTTCSSEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHhhCCCCCeeCHHHHHHHHHHHcCCCC-CCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            355678999999999 99999 9999999999965444  4 788899999999999999999999999877543

>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C

Probab=98.98  E-value=5.8e-10  Score=93.83  Aligned_cols=65  Identities=22%  Similarity=0.426  Sum_probs=59.3

Q ss_pred             HhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcC--CCCCcccHHHHHHHHh
Q 014171          270 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDC--NTDGLVDFSEFVAATL  335 (429)
Q Consensus       270 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~--~~~g~I~~~eF~~~~~  335 (429)
                      .++++++|+.+|.|++|+|+.+||..+|+. +|..++++++..+++.+|.  |++|.|+|+||+..+.
T Consensus        84 ~~~l~~aF~~fD~d~~G~I~~~el~~~l~~-~g~~ls~~e~~~l~~~~D~~~d~dG~I~~~EF~~~m~  150 (159)
T 3i5g_C           84 ADEFMEAFKTFDREGQGLISSAEIRNVLKM-LGERITEDQCNDIFTFCDIREDIDGNIKYEDLMKKVM  150 (159)
T ss_dssp             HHHHHHHHHHHCTTSSSEECHHHHHHHHHH-SSSCCCHHHHHHHHHHTTCCCCSSCCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCcCcHHHHHHHHHH-hCCCCCHHHHHHHHHHhCcCCCCCCeEeHHHHHHHHH
Confidence            356888999999999999999999999955 9999999999999999995  8899999999998764

>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A

Probab=98.97  E-value=4.2e-10  Score=82.94  Aligned_cols=61  Identities=30%  Similarity=0.489  Sum_probs=54.8

Q ss_pred             HHHHHHhccccCCCCCccCHHHHHhhhcCCC-C------HHHHHHHhCCCCCCcccHHHHHHHHHhccc
Q 014171          350 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG-S------IDPLLEEADIDKDGRISLSEFRRLLRTASI  411 (429)
Q Consensus       350 ~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~-~------~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~  411 (429)
                      ..++ +|+.||+|++|+|+.+||+.++...| .      +..++..+|.|++|.|+|+||+.++.....
T Consensus         9 ~~l~-~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~~~   76 (81)
T 1c7v_A            9 EILR-AFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKKSKN   76 (81)
T ss_dssp             HHHH-HHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHCC--
T ss_pred             HHHH-HHHHHCCCCCCcCCHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHhhhh
Confidence            5688 99999999999999999999999887 3      888999999999999999999999987654

>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A

Probab=98.97  E-value=2.3e-10  Score=87.02  Aligned_cols=70  Identities=20%  Similarity=0.412  Sum_probs=61.3

Q ss_pred             hHHHhhhhccccccCC-CCCC-cccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhh
Q 014171          267 DEELADLRDQFDAIDV-DKNG-SISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH  336 (429)
Q Consensus       267 ~~~~~~l~~~F~~~D~-~~~G-~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~  336 (429)
                      ++...+++.+|+.+|. |++| +|+.+||..++.+.+|..++..++..+++.+|.|++|.|+|+||+..+..
T Consensus         6 ~~~~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~   77 (93)
T 1xk4_A            6 EKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIK   77 (93)
T ss_dssp             HHHHHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhhcCCCcCeECHHHHHHHHHHHCcccCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence            3456789999999999 9999 99999999999555887777788999999999999999999999987654

>1yx7_A Calsensin, LAN3-6 antigen; calcium-binding protein EF-hand, helix-loop- helix, nervous system, metal binding protein; NMR {Haemopis marmorata} PDB: 1yx8_A

Probab=98.97  E-value=1.4e-10  Score=86.01  Aligned_cols=69  Identities=25%  Similarity=0.409  Sum_probs=60.3

Q ss_pred             hHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCC--CCccHHHHHH----HHHHhcCCCCCcccHHHHHHHHhh
Q 014171          267 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP--WKLKESRVLE----ILQAIDCNTDGLVDFSEFVAATLH  336 (429)
Q Consensus       267 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~--~~~~~~~~~~----l~~~~d~~~~g~I~~~eF~~~~~~  336 (429)
                      +++.++++.+|..+|.|++|+|+.+||..++.. +|  ..++..++..    ++..+|.|++|.|+|+||+..+..
T Consensus         3 ~~~~~~l~~~F~~~D~d~~G~i~~~el~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~D~~~dg~I~~~eF~~~~~~   77 (83)
T 1yx7_A            3 CKVKAELEAAFKKLDANGDGYVTALELQTFMVT-LDAYKALSKDKVKEASAKLIKMADKNSDGKISKEEFLNANAE   77 (83)
T ss_dssp             SCSCTHHHHHHHHHSSSCSSSCSHHHHHHHHHH-HTTCTTTTTTTTHHHHHHHHTTTCSSSCSCCSHHHHHHHHHH
T ss_pred             ccHHHHHHHHHHHHCCCCCCcCcHHHHHHHHHH-HccccCCCHHHHHHHHHHHHHHhCCCCCCCCcHHHHHHhhHH
Confidence            445577899999999999999999999999965 67  7788888988    999999999999999999965543

>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A

Probab=98.96  E-value=2.4e-10  Score=84.25  Aligned_cols=66  Identities=24%  Similarity=0.456  Sum_probs=59.4

Q ss_pred             HHHhhhhccccccCCCCCCcccHHHHHHHHHhhCC-CCccHHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q 014171          268 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP-WKLKESRVLEILQAIDCNTDGLVDFSEFVAATL  335 (429)
Q Consensus       268 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~-~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~  335 (429)
                      ....+++ +|..+|.|++|+|+.+||..++ ..+| ..++..++..++..+|.|++|.|+|+||+..+.
T Consensus         6 ~~~~~l~-~F~~~D~d~~G~i~~~el~~~l-~~~g~~~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~   72 (81)
T 1c7v_A            6 DEEEILR-AFKVFDANGDGVIDFDEFKFIM-QKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIK   72 (81)
T ss_dssp             -CHHHHH-HHHHHSCSGGGEECHHHHHHHS-STTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHH
T ss_pred             cHHHHHH-HHHHHCCCCCCcCCHHHHHHHH-HHhCCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            3456788 9999999999999999999999 4588 889999999999999999999999999998764

>3li6_A Calcium-binding protein; calcium signaling protein, assemble free energy, dynamic behaviour, cytoskeleton, metal binding; 2.50A {Entamoeba histolytica}

Probab=98.96  E-value=1.7e-10  Score=81.32  Aligned_cols=56  Identities=25%  Similarity=0.504  Sum_probs=51.1

Q ss_pred             HHHhccccCCCCCccCHHHHHhhhcCCC------CHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          353 QAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       353 ~~~F~~~D~~~~G~I~~~el~~~~~~~~------~~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                      +.+|+.+|+|++|+|+.+||+.++...+      ++..++..+|.|++|.|+|+||+.+++.
T Consensus         3 ~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~D~~~~g~i~~~ef~~~~~~   64 (66)
T 3li6_A            3 EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGS   64 (66)
T ss_dssp             CHHHHHHCTTCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHTC
T ss_pred             HHHHHHHCCCCCCcccHHHHHHHHHHccCCCcHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence            4689999999999999999999998775      3788999999999999999999999875

>1xk4_A Calgranulin A; S100 family, heterotetramer, metal binding protein; HET: FLC; 1.80A {Homo sapiens} SCOP: a.39.1.2 PDB: 1mr8_A

Probab=98.95  E-value=1.1e-09  Score=83.10  Aligned_cols=62  Identities=18%  Similarity=0.266  Sum_probs=54.9

Q ss_pred             HHHHHHHhccccC-CCCC-ccCHHHHHhhh-cCCC------CHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          349 HLRSQAAFEKFDI-DRDG-FITPEELRMHT-GLKG------SIDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       349 ~~~l~~~F~~~D~-~~~G-~I~~~el~~~~-~~~~------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      ...++.+|+.||+ |++| +|+.+||+.++ ...|      ++..++..+|.|+||.|+|+||+.++.+..
T Consensus         9 ~~~l~~~F~~~D~~d~dG~~I~~~El~~~l~~~~g~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~~~~~~   79 (93)
T 1xk4_A            9 LNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKMG   79 (93)
T ss_dssp             HHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhcCCCcCeECHHHHHHHHHHHCcccCCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence            3468899999999 9999 99999999999 5555      589999999999999999999999987643

>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A

Probab=98.95  E-value=1.2e-09  Score=81.57  Aligned_cols=61  Identities=31%  Similarity=0.483  Sum_probs=55.7

Q ss_pred             HHHHHHHhccccCCCCCccCHHHHHhhhcCCC-----CHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          349 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----SIDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       349 ~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~-----~~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                      ...++.+|+.+|+|++|+|+.+||+.++...|     ++..++..+|.|+||.|+|+||+.++...
T Consensus        10 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~~~~~D~~~dg~i~~~eF~~~~~~~   75 (86)
T 2opo_A           10 IADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN   75 (86)
T ss_dssp             HHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTTTCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHCCCCCCCcCHHHHHHHHHHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHC
Confidence            45688999999999999999999999998876     38899999999999999999999999765

>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A

Probab=98.95  E-value=9.1e-10  Score=89.30  Aligned_cols=68  Identities=22%  Similarity=0.344  Sum_probs=60.3

Q ss_pred             hHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhh
Q 014171          267 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVH  338 (429)
Q Consensus       267 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~  338 (429)
                      .++..+++++|+.+| |++|+|+.+|+..+|.+ .|  +++.++.+|++..|.|++|.|+|+||+.+|..+.
T Consensus        47 ~~e~~~l~~~F~~fD-d~dG~Is~~El~~~l~~-~g--l~~~el~~I~~~~D~d~dG~Ld~~EF~~am~li~  114 (139)
T 2jq6_A           47 GKDKPTYDEIFYTLS-PVNGKITGANAKKEMVK-SK--LPNTVLGKIWKLADVDKDGLLDDEEFALANHLIK  114 (139)
T ss_dssp             GGTHHHHHHHHHHSC-CSSSEEEHHHHHHHHHH-TT--CCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHHHH
T ss_pred             hHHHHHHHHHHHHhC-CCCCeECHHHHHHHHHH-hC--cCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence            356778999999999 99999999999999965 55  6789999999999999999999999998876543

>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}

Probab=98.95  E-value=7.5e-10  Score=83.70  Aligned_cols=61  Identities=26%  Similarity=0.414  Sum_probs=55.2

Q ss_pred             HHHHHHHhccccCCCCCccCHHHHHhhhcCCC----CHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          349 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       349 ~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~----~~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                      ...++.+|+.+|+|++|+|+.+||+.++...|    ++..++..+|.|+||.|+|+||+.++...
T Consensus        26 ~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~g~~~~~~~~~~~~~D~d~dg~I~~~EF~~~~~~~   90 (91)
T 2pmy_A           26 LARLRSVFAACDANRSGRLEREEFRALCTELRVRPADAEAVFQRLDADRDGAITFQEFARGFLGS   90 (91)
T ss_dssp             HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCCHHHHHHHHHHHCTTCSSEECHHHHTHHHHHT
T ss_pred             HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHcCcCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHHH
Confidence            45688999999999999999999999998776    38889999999999999999999998753

>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}

Probab=98.95  E-value=1.1e-09  Score=82.89  Aligned_cols=62  Identities=32%  Similarity=0.601  Sum_probs=56.3

Q ss_pred             HHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          349 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       349 ~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      ...++.+|+.||+|++|+|+.+||+.++...+.      +..++..+|.|++|.|+|+||+.++....
T Consensus         8 ~~~l~~~F~~~D~d~~G~i~~~el~~~l~~~g~~~~~~~~~~l~~~~d~~~dg~i~~~eF~~~~~~~~   75 (92)
T 2kn2_A            8 EEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVKMMMTVR   75 (92)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSCCSSEEHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHCCCCCCeEcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhcc
Confidence            456889999999999999999999999988773      88999999999999999999999997654

>1dgu_A Calcium-saturated CIB; helical, EF-hands, blood clotting; NMR {Homo sapiens} SCOP: a.39.1.5 PDB: 1dgv_A 1xo5_A 1y1a_A*

Probab=98.95  E-value=1.5e-09  Score=93.29  Aligned_cols=105  Identities=14%  Similarity=0.134  Sum_probs=79.6

Q ss_pred             cccccCCCCCCc-ccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhc---ccccHHHHHH
Q 014171          276 QFDAIDVDKNGS-ISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE---EHDSEKWHLR  351 (429)
Q Consensus       276 ~F~~~D~~~~G~-i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~---~~~~~~~~~~  351 (429)
                      +|..+|.|++|. |+.+||..++............+..+|..+|.|++|.|+.+||..++.......   .....+....
T Consensus        65 l~~~~D~d~~G~~I~~~EF~~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~~~~~~~~~~~~~~~~~~~  144 (183)
T 1dgu_A           65 ICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQL  144 (183)
T ss_dssp             HHHHHSCSSSSCCCCHHHHHHHHHHHSTTCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHSSSCCCHHHHHHHHHH
T ss_pred             HHHHhCCCCCCCEecHHHHHHHHHHhcCCCCHHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhcccccCCCCHHHHHHH
Confidence            456679999999 999999999976554445567899999999999999999999998776543200   0011111112


Q ss_pred             HHHHhccccCCCCCccCHHHHHhhhcCCC
Q 014171          352 SQAAFEKFDIDRDGFITPEELRMHTGLKG  380 (429)
Q Consensus       352 l~~~F~~~D~~~~G~I~~~el~~~~~~~~  380 (429)
                      +..+|+.+|.|++|.|+.+||..++....
T Consensus       145 ~~~~~~~~D~d~dG~I~~~EF~~~~~~~~  173 (183)
T 1dgu_A          145 IDNILEESDIDRDGTINLSEFQHVISRSP  173 (183)
T ss_dssp             HHHHHHHHCTTSSSEEEHHHHHHHHCSSC
T ss_pred             HHHHHHHhCCCCCCeEcHHHHHHHHHhCh
Confidence            33589999999999999999999887654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	429
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	7e-54
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	7e-54
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	3e-53
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	6e-52
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	3e-51
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	1e-50
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	5e-48
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	3e-46
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	1e-45
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	9e-45
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	2e-44
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	9e-44
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	9e-43
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	2e-42
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	3e-42
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	4e-40
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	2e-39
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	2e-38
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	2e-38
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	2e-38
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	5e-37
d1o6la_	337	d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sap	6e-37
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	2e-36
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	7e-36
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	1e-35
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	3e-35
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	6e-35
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	4e-34
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	5e-34
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	1e-33
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	2e-33
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-32
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	4e-32
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	4e-32
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	5e-32
d1u59a_	285	d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Hum	3e-31
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	3e-31
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	5e-31
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	6e-31
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	7e-31
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	9e-31
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	6e-30
d1u46a_	273	d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Hum	7e-29
d1k2pa_	258	d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Hum	1e-28
d1qpca_	272	d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Hom	2e-28
d1jpaa_	299	d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mou	2e-28
d1rjba_	325	d.144.1.7 (A:) Fl cytokine receptor {Human (Homo s	4e-28
d1fvra_	309	d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [	9e-28
d1mp8a_	273	d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Huma	1e-27
d1opja_	287	d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mou	6e-27
d1sm2a_	263	d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Hu	1e-26
d1xkka_	317	d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-	7e-26
d1fgka_	299	d.144.1.7 (A:) Fibroblast growth factor receptor 1	3e-25
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	5e-25
d1lufa_	301	d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus n	8e-25
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	1e-24
d1mqba_	283	d.144.1.7 (A:) epha2 receptor tyrosine kinase {Hum	6e-24
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	8e-24
d1t46a_	311	d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens	2e-23
d1lkja_	146	a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom	1e-21
d1lkja_	146	a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom	7e-07
d1p4oa_	308	d.144.1.7 (A:) Insulin-like growth factor 1 recept	1e-21
d1ywna1	299	d.144.1.7 (A:818-1166) Vascular endothelial growth	4e-21
d1topa_	162	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	4e-21
d1vjya_	303	d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human	2e-20
d1exra_	146	a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetr	4e-20
d1dtla_	156	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	1e-19
d1g8ia_	187	a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1	3e-19
d1bjfa_	181	a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId	6e-19
d1uhka1	187	a.39.1.5 (A:3-189) Calcium-regulated photoprotein	1e-18
d1uhka1	187	a.39.1.5 (A:3-189) Calcium-regulated photoprotein	3e-04
d2obha1	141	a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapien	2e-18
d1fpwa_	190	a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1	1e-16
d1s6ja_	87	a.39.1.5 (A:) Calcium-dependent protein kinase sk5	1e-16
d1s6ja_	87	a.39.1.5 (A:) Calcium-dependent protein kinase sk5	2e-09
d2scpa_	174	a.39.1.5 (A:) Sarcoplasmic calcium-binding protein	1e-16
d2scpa_	174	a.39.1.5 (A:) Sarcoplasmic calcium-binding protein	5e-04
d2scpa_	174	a.39.1.5 (A:) Sarcoplasmic calcium-binding protein	0.002
d1nyaa_	176	a.39.1.5 (A:) Calerythrin {Saccharopolyspora eryth	2e-16
d1s6ca_	178	a.39.1.5 (A:) Kchip1, Kv4 potassium channel-intera	4e-16
d1s6ia_	182	a.39.1.5 (A:) Calcium-dependent protein kinase sk5	1e-15
d1w7jb1	139	a.39.1.5 (B:11-149) Myosin Essential Chain {Human	3e-15
d1w7jb1	139	a.39.1.5 (B:11-149) Myosin Essential Chain {Human	3e-04
d1qv0a_	189	a.39.1.5 (A:) Calcium-regulated photoprotein {Hydr	3e-15
d1pvaa_	109	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	5e-15
d1pvaa_	109	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	7e-09
d2sasa_	185	a.39.1.5 (A:) Sarcoplasmic calcium-binding protein	1e-14
d2zfda1	183	a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {	3e-14
d1omra_	201	a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId:	5e-14
d1jbaa_	189	a.39.1.5 (A:) Guanylate cyclase activating protein	2e-13
d5pala_	109	a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis	5e-13
d5pala_	109	a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis	1e-08
d1xo5a_	180	a.39.1.5 (A:) Calcium- and integrin-binding protei	1e-12
d2pvba_	107	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	1e-12
d2pvba_	107	a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [Tax	8e-09
d1auib_	165	a.39.1.5 (B:) Calcineurin regulatory subunit (B-ch	1e-12
d1f54a_	77	a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom	2e-12
d1f54a_	77	a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharom	1e-06
d1rroa_	108	a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus)	4e-12
d1rroa_	108	a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus)	2e-10
d1jfja_	134	a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histoly	4e-12
d1qxpa2	188	a.39.1.8 (A:515-702) Calpain large subunit, C-term	1e-11
d1qxpa2	188	a.39.1.8 (A:515-702) Calpain large subunit, C-term	3e-11
d1c7va_	68	a.39.1.5 (A:) Calcium vector protein {Amphioxus (B	1e-11
d1c7va_	68	a.39.1.5 (A:) Calcium vector protein {Amphioxus (B	6e-10
d1avsa_	81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	2e-11
d1avsa_	81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	7e-08
d2opoa1	81	a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che	2e-11
d2opoa1	81	a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Che	1e-08
d1rwya_	109	a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [Ta	3e-11
d1rwya_	109	a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [Ta	4e-09
d2pq3a1	73	a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [T	5e-11
d2pq3a1	73	a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [T	2e-06
d1wrka1	82	a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens)	6e-11
d1wrka1	82	a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens)	7e-07
d1oqpa_	77	a.39.1.5 (A:) Caltractin (centrin 2) {Green algae	7e-11
d1oqpa_	77	a.39.1.5 (A:) Caltractin (centrin 2) {Green algae	2e-10
d1k94a_	165	a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta	1e-10
d1k94a_	165	a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta	5e-10
d1k94a_	165	a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [Ta	0.001
d1juoa_	172	a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId:	2e-10
d1ij5a_	321	a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind	2e-10
d1ij5a_	321	a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind	4e-08
d1ij5a_	321	a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-bind	7e-08
d1fi5a_	81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus),	3e-10
d1fi5a_	81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus),	2e-08
d1fi5a_	81	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus),	0.001
d1df0a1	186	a.39.1.8 (A:515-700) Calpain large subunit, C-term	4e-10
d1df0a1	186	a.39.1.8 (A:515-700) Calpain large subunit, C-term	2e-08
d1tiza_	67	a.39.1.5 (A:) Calmodulin-related protein T21P5.17	4e-10
d1tiza_	67	a.39.1.5 (A:) Calmodulin-related protein T21P5.17	3e-09
d1tiza_	67	a.39.1.5 (A:) Calmodulin-related protein T21P5.17	3e-04
d1wdcb_	142	a.39.1.5 (B:) Myosin Essential Chain {Bay scallop	6e-10
d1m45a_	146	a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's ye	7e-10
d1jc2a_	75	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	8e-10
d1jc2a_	75	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	5e-09
d1jc2a_	75	a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus)	0.002
d2zkmx1	170	a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human	1e-09
d1cb1a_	78	a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [Tax	1e-09
d1cb1a_	78	a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [Tax	1e-05
d1alva_	173	a.39.1.8 (A:) Calpain small (regulatory) subunit (	3e-09
d1alva_	173	a.39.1.8 (A:) Calpain small (regulatory) subunit (	6e-08
d1wdcc_	152	a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop	4e-09
d1snla_	99	a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo	7e-09
d1snla_	99	a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo	6e-08
d1a4pa_	92	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	9e-09
d1a4pa_	92	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	1e-04
d1ggwa_	140	a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharo	1e-08
d1hqva_	181	a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mous	1e-08
d1xk4a1	87	a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sa	2e-08
d1xk4a1	87	a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sa	0.001
d1fw4a_	65	a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId:	3e-08
d1fw4a_	65	a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId:	3e-07
d1psra_	100	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	4e-08
d1psra_	100	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	0.001
d2fcea1	61	a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [	5e-08
d2fcea1	61	a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [	4e-06
d1zara2	191	d.144.1.9 (A:91-281) Rio2 serine protein kinase C-	9e-08
d3c1va1	93	a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sa	2e-07
d3c1va1	93	a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sa	1e-04
d1qx2a_	76	a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [Tax	3e-07
d1qx2a_	76	a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [Tax	2e-05
d1yuta1	98	a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sa	5e-07
d1yuta1	98	a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sa	0.001
d1y1xa_	182	a.39.1.8 (A:) Programmed cell death 6 protein-like	6e-07
d1ksoa_	93	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	1e-06
d1ksoa_	93	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	0.002
d1zfsa1	93	a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus no	1e-06
d1zfsa1	93	a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus no	4e-04
d1wlza1	83	a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {H	1e-06
d1wlza1	83	a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {H	0.001
d2jxca1	95	a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [	3e-05
d1e8aa_	87	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	3e-05
d1k8ua_	89	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	3e-05
d1k8ua_	89	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	0.004
d1c07a_	95	a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId:	7e-05
d1c07a_	95	a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId:	4e-04
d1qlsa_	95	a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa),	7e-05
d3cr5x1	90	a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos tauru	8e-05
d1j55a_	94	a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapien	3e-04
d1fi6a_	92	a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId:	3e-04
d1qjta_	99	a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId:	3e-04
d1sraa_	151	a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPAR	4e-04
d1xk4c1	83	a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sa	0.001
d2hf5a1	33	a.39.1.5 (A:81-113) Troponin C {Human (Homo sapien	0.003

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  179 bits (456), Expect = 7e-54
 Identities = 93/212 (43%), Positives = 126/212 (59%), Gaps = 4/212 (1%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L  GGEL DRI   +   YTE+DA+ ++ Q+L      H  G+VHRD+KPEN L+ S  E
Sbjct: 88  LVSGGELFDRI--VEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDE 145

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCG 163
           DS +  +DFGLS    PG       G+  YVAPEVL +K      D WSIGVI YILLCG
Sbjct: 146 DSKIMISDFGLSKMEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 205

Query: 164 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 223
             PF+D+ +  +F+++L+ + +F    W  IS+SAKDF++ L+ KDP  R T  QAL HP
Sbjct: 206 YPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHP 265

Query: 224 WVREGGDASEIPIDISVLNNMRQFVKYSRLKQ 255
           W+  G  A +  I  SV   +++    S+ KQ
Sbjct: 266 WIA-GDTALDKNIHQSVSEQIKKNFAKSKWKQ 296

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  180 bits (458), Expect = 7e-54
 Identities = 74/285 (25%), Positives = 136/285 (47%), Gaps = 14/285 (4%)

Query: 2   IKILIGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDS 61
           +++    ++  + + +V++   +    + + IV+           +GGEL  RI  + D 
Sbjct: 55  VELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMEC--------LDGGELFSRIQDRGDQ 106

Query: 62  RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKP 121
            +TE++A+ +++ +       H   + HRD+KPEN L+ S + ++ LK TDFG +     
Sbjct: 107 AFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTS 166

Query: 122 GKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPFWDKTE----DGIF 176
                    + YYVAPEVL  +      D+WS+GVI YILLCG  PF+         G+ 
Sbjct: 167 HNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMK 226

Query: 177 KEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 236
             +   + +F    W  +S   K  ++ LL  +P  R+T  + ++HPW+ +     + P+
Sbjct: 227 TRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVPQTPL 286

Query: 237 DISVLNNMRQFVKYSRLKQFALRALASTLDDEELADLRDQFDAID 281
             S +    +  ++  +K+    ALA+   D E   ++   DA +
Sbjct: 287 HTSRVLKEDKE-RWEDVKEEMTSALATMRVDYEQIKIKKIEDASN 330

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score =  179 bits (455), Expect = 3e-53
 Identities = 75/206 (36%), Positives = 111/206 (53%), Gaps = 3/206 (1%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
              GGEL DRI   +D + +E +    +RQ        H H +VH D+KPEN +    K+
Sbjct: 107 FLSGGELFDRIA-AEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMC-ETKK 164

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCG 163
            SS+K  DFGL+  + P +  +    +A + APE++ R+  G  +D+W+IGV+ Y+LL G
Sbjct: 165 ASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSG 224

Query: 164 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 223
             PF  + +    + V R   +F    + S+S  AKDF+K LL K+PR RLT   AL HP
Sbjct: 225 LSPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHP 284

Query: 224 WVREGGDASEIPIDISVLNNMRQFVK 249
           W++         I  S  N +RQ +K
Sbjct: 285 WLKGDHSNLTSRIPSSRYNKIRQKIK 310

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score =  173 bits (440), Expect = 6e-52
 Identities = 66/190 (34%), Positives = 104/190 (54%), Gaps = 12/190 (6%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L + GEL D +   +    +EK+   ++R +L V    H   +VHRD+KPEN L     +
Sbjct: 91  LMKKGELFDYL--TEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLD---D 145

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL-------KRKSGPESDVWSIGVIT 157
           D ++K TDFG S  + PG+K +++ G+  Y+APE++           G E D+WS GVI 
Sbjct: 146 DMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 205

Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
           Y LL G  PFW + +  + + ++     F    W   S++ KD V + LV  P+ R TA 
Sbjct: 206 YTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAE 265

Query: 218 QALSHPWVRE 227
           +AL+HP+ ++
Sbjct: 266 EALAHPFFQQ 275

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  173 bits (439), Expect = 3e-51
 Identities = 62/221 (28%), Positives = 112/221 (50%), Gaps = 7/221 (3%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
              G ++ +RI         E++    V Q+       H H + H D++PEN ++   + 
Sbjct: 82  FISGLDIFERI-NTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIY-QTRR 139

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCG 163
            S++K  +FG +  +KPG  F+ +  +  Y APEV +       +D+WS+G + Y+LL G
Sbjct: 140 SSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSG 199

Query: 164 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 223
             PF  +T   I + ++  +  F  + +  IS  A DFV +LLVK+ ++R+TA++AL HP
Sbjct: 200 INPFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHP 259

Query: 224 WVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALAST 264
           W+++  +     +   V+  ++    Y  L +  L  + S 
Sbjct: 260 WLKQKIE----RVSTKVIRTLKHRRYYHTLIKKDLNMVVSA 296

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score =  172 bits (437), Expect = 1e-50
 Identities = 71/195 (36%), Positives = 110/195 (56%), Gaps = 6/195 (3%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
              GGEL +++ A + ++ +E +A   +RQ+ +     H +  VH D+KPEN +F + K 
Sbjct: 104 FMSGGELFEKV-ADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMF-TTKR 161

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCG 163
            + LK  DFGL+  + P +  +   G+A + APEV + K  G  +D+WS+GV++YILL G
Sbjct: 162 SNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG 221

Query: 164 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHP 223
             PF  + +D   + V     +     +  IS   KDF++KLL+ DP  R+T  QAL HP
Sbjct: 222 LSPFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHP 281

Query: 224 WVREG---GDASEIP 235
           W+  G   G  S+IP
Sbjct: 282 WLTPGNAPGRDSQIP 296

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  163 bits (413), Expect = 5e-48
 Identities = 51/183 (27%), Positives = 88/183 (48%), Gaps = 11/183 (6%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
              G +   +  +K S++ E+  A  + ++    + CH   ++HRD+KPEN L  S    
Sbjct: 88  APLGTVYREL--QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGS---A 142

Query: 106 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGR 164
             LK  DFG S    P  +   + G+  Y+ PE+++ +    + D+WS+GV+ Y  L G+
Sbjct: 143 GELKIADFGWSVHA-PSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK 201

Query: 165 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPW 224
            PF   T    +K + R +  F       ++  A+D + +LL  +P  R    + L HPW
Sbjct: 202 PPFEANTYQETYKRISRVEFTF----PDFVTEGARDLISRLLKHNPSQRPMLREVLEHPW 257

Query: 225 VRE 227
           +  
Sbjct: 258 ITA 260

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  158 bits (402), Expect = 3e-46
 Identities = 55/193 (28%), Positives = 95/193 (49%), Gaps = 12/193 (6%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
            C GG  +D ++ + +   TE    VV +Q L      H + ++HRD+K  N LF     
Sbjct: 90  FCAGG-AVDAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFT---L 145

Query: 105 DSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVL------KRKSGPESDVWSIGVIT 157
           D  +K  DFG+S    +  ++    +G+ Y++APEV+       R    ++DVWS+G+  
Sbjct: 146 DGDIKLADFGVSAKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITL 205

Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
             +     P  +     +  ++ +++P    +P    S++ KDF+KK L K+  AR T +
Sbjct: 206 IEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQP-SRWSSNFKDFLKKCLEKNVDARWTTS 264

Query: 218 QALSHPWVREGGD 230
           Q L HP+V    +
Sbjct: 265 QLLQHPFVTVDSN 277

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  157 bits (397), Expect = 1e-45
 Identities = 58/189 (30%), Positives = 88/189 (46%), Gaps = 11/189 (5%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
            C GGEL DRI  + D    E DA     Q++      H  G+ HRD+KPEN L      
Sbjct: 84  YCSGGELFDRI--EPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDE--- 138

Query: 105 DSSLKATDFGLSDFIKPG---KKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYI 159
             +LK +DFGL+   +     +    + G+  YVAPE+LKR+       DVWS G++   
Sbjct: 139 RDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTA 198

Query: 160 LLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA 219
           +L G  P+   ++        + K  +   PW  I ++    + K+LV++P AR+T    
Sbjct: 199 MLAGELPWDQPSDSCQEYSDWKEKKTYL-NPWKKIDSAPLALLHKILVENPSARITIPDI 257

Query: 220 LSHPWVREG 228
               W  + 
Sbjct: 258 KKDRWYNKP 266

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  154 bits (391), Expect = 9e-45
 Identities = 35/185 (18%), Positives = 71/185 (38%), Gaps = 10/185 (5%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG--LVHRDMKPENFLFKSA 102
           L   G L   +  K+      K      RQ+L+     H     ++HRD+K +N      
Sbjct: 93  LMTSGTLKTYL--KRFKVMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITG- 149

Query: 103 KEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLC 162
               S+K  D GL+   K     + ++G+  ++APE+ + K     DV++ G+    +  
Sbjct: 150 -PTGSVKIGDLGLATL-KRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMAT 207

Query: 163 GRRPFWDK-TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 221
              P+ +      I++ V                   K+ ++  + ++   R +    L+
Sbjct: 208 SEYPYSECQNAAQIYRRVTSGVKPAS--FDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 265

Query: 222 HPWVR 226
           H + +
Sbjct: 266 HAFFQ 270

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  154 bits (391), Expect = 2e-44
 Identities = 53/193 (27%), Positives = 92/193 (47%), Gaps = 9/193 (4%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
              GG L D +    ++   E   A V R+ L+     H + ++HRD+K +N L      
Sbjct: 98  YLAGGSLTDVV---TETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGM--- 151

Query: 105 DSSLKATDFGLSDFIK-PGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC 162
           D S+K TDFG    I     K   +VG+ Y++APEV+ RK+ GP+ D+WS+G++   ++ 
Sbjct: 152 DGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIE 211

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           G  P+ ++        +  N      +    +S   +DF+ + L  D   R +A + L H
Sbjct: 212 GEPPYLNENPLRALYLIATNGT-PELQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270

Query: 223 PWVREGGDASEIP 235
            +++     S + 
Sbjct: 271 QFLKIAKPLSSLT 283

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  152 bits (385), Expect = 9e-44
 Identities = 70/185 (37%), Positives = 105/185 (56%), Gaps = 4/185 (2%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA-K 103
           L  GGEL D +  K+    TE++A   ++Q+L      H   + H D+KPEN +      
Sbjct: 94  LVAGGELFDFLAEKE--SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNV 151

Query: 104 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC 162
               +K  DFGL+  I  G +F++I G+  +VAPE++  +  G E+D+WSIGVITYILL 
Sbjct: 152 PKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 211

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           G  PF   T+      V     +F  + + + S  AKDF+++LLVKDP+ R+T   +L H
Sbjct: 212 GASPFLGDTKQETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 271

Query: 223 PWVRE 227
           PW++ 
Sbjct: 272 PWIKP 276

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  150 bits (380), Expect = 9e-43
 Identities = 55/219 (25%), Positives = 93/219 (42%), Gaps = 17/219 (7%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
            C G       + KK     E + A V    L+  A  H H ++HRD+K  N L     E
Sbjct: 96  YCLGSASDLLEVHKK--PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLS---E 150

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL----KRKSGPESDVWSIGVITYIL 160
              +K  DFG +  + P   F   VG+ Y++APEV+    + +   + DVWS+G+    L
Sbjct: 151 PGLVKLGDFGSASIMAPANSF---VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIEL 207

Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
              + P ++         + +N+           S   ++FV   L K P+ R T+   L
Sbjct: 208 AERKPPLFNMNAMSALYHIAQNES--PALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLL 265

Query: 221 SHPWVREGGDASEIPIDIS-VLNNMRQF--VKYSRLKQF 256
            H +V      + I   I    + +R+   ++Y ++K+ 
Sbjct: 266 KHRFVLRERPPTVIMDLIQRTKDAVRELDNLQYRKMKKI 304

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  149 bits (377), Expect = 2e-42
 Identities = 60/187 (32%), Positives = 92/187 (49%), Gaps = 13/187 (6%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
             + GELL  I  +K   + E        +++      H  G++HRD+KPEN L     E
Sbjct: 89  YAKNGELLKYI--RKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---E 143

Query: 105 DSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYIL 160
           D  ++ TDFG +  + P  K       VG+A YV+PE+L  KS    SD+W++G I Y L
Sbjct: 144 DMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQL 203

Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           + G  PF    E  IF+++++ + DF           A+D V+KLLV D   RL   +  
Sbjct: 204 VAGLPPFRAGNEYLIFQKIIKLEYDF----PEKFFPKARDLVEKLLVLDATKRLGCEEME 259

Query: 221 SHPWVRE 227
            +  ++ 
Sbjct: 260 GYGPLKA 266

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  147 bits (373), Expect = 3e-42
 Identities = 50/190 (26%), Positives = 86/190 (45%), Gaps = 15/190 (7%)

Query: 45  LCEGGELLDRI--LAKKDSRYTEKDAAVVVRQMLRVAAECHL-----HGLVHRDMKPENF 97
            CEGG+L   I    K+     E+    V+ Q+     ECH      H ++HRD+KP N 
Sbjct: 86  YCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANV 145

Query: 98  LFKSAKEDSSLKATDFGLSDFIKPGKKF-QDIVGSAYYVAPEVLKRKS-GPESDVWSIGV 155
                    ++K  DFGL+  +     F +  VG+ YY++PE + R S   +SD+WS+G 
Sbjct: 146 FLD---GKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGC 202

Query: 156 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 215
           + Y L     PF   ++  +  ++   K    R+     S+   + + ++L      R +
Sbjct: 203 LLYELCALMPPFTAFSQKELAGKIREGKF---RRIPYRYSDELNEIITRMLNLKDYHRPS 259

Query: 216 AAQALSHPWV 225
             + L +P +
Sbjct: 260 VEEILENPLI 269

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  143 bits (362), Expect = 4e-40
 Identities = 51/186 (27%), Positives = 85/186 (45%), Gaps = 12/186 (6%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
              GG+L+  I  +   ++    A     +++      H  G+V+RD+K +N L     +
Sbjct: 84  YLNGGDLMYHI--QSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD---K 138

Query: 105 DSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC 162
           D  +K  DFG+  + +    K     G+  Y+APE+L  +      D WS GV+ Y +L 
Sbjct: 139 DGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLI 198

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA-LS 221
           G+ PF  + E+ +F  +  + P +       +   AKD + KL V++P  RL        
Sbjct: 199 GQSPFHGQDEEELFHSIRMDNPFY----PRWLEKEAKDLLVKLFVREPEKRLGVRGDIRQ 254

Query: 222 HPWVRE 227
           HP  RE
Sbjct: 255 HPLFRE 260

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  140 bits (354), Expect = 2e-39
 Identities = 50/185 (27%), Positives = 81/185 (43%), Gaps = 16/185 (8%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
             E  + L   +  +     E+ A     Q+L     CH  G++HRD+K EN L      
Sbjct: 90  RPEPVQDLFDFI-TERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILID--LN 146

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLC 162
              LK  DFG    +K    + D  G+  Y  PE +   R  G  + VWS+G++ Y ++C
Sbjct: 147 RGELKLIDFGSGALLKD-TVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVC 205

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           G  PF    E      ++R +  FR      +S+  +  ++  L   P  R T  +  +H
Sbjct: 206 GDIPFEHDEE------IIRGQVFFR----QRVSSECQHLIRWCLALRPSDRPTFEEIQNH 255

Query: 223 PWVRE 227
           PW+++
Sbjct: 256 PWMQD 260

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score =  138 bits (348), Expect = 2e-38
 Identities = 44/184 (23%), Positives = 76/184 (41%), Gaps = 4/184 (2%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
             +G  L D +    +   T K A  V+    +     H +G++HRD+KP N +  +   
Sbjct: 92  YVDGVTLRDIV--HTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNA 149

Query: 105 DSSLKATDFG-LSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC 162
              +       ++D      +   ++G+A Y++PE  +  S    SDV+S+G + Y +L 
Sbjct: 150 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 209

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           G  PF   +   +  + +R  P         +S      V K L K+P  R   A  +  
Sbjct: 210 GEPPFTGDSPVSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA 269

Query: 223 PWVR 226
             VR
Sbjct: 270 DLVR 273

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  139 bits (351), Expect = 2e-38
 Identities = 49/225 (21%), Positives = 80/225 (35%), Gaps = 48/225 (21%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECH-LHGLVHRDMKPENFLFKSAK 103
             +GG L   +  KK  R  E+    V   +++        H ++HRD+KP N L  S  
Sbjct: 85  HMDGGSLDQVL--KKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS-- 140

Query: 104 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC 162
               +K  DFG+S  +         VG+  Y++PE L+      +SD+WS+G+    +  
Sbjct: 141 -RGEIKLCDFGVSGQLIDSMA-NSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAV 198

Query: 163 GRRPFWDKTED---GIFKEVLRNKPDF--------------------------------- 186
           GR P           +F   +                                       
Sbjct: 199 GRYPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIV 258

Query: 187 ----RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
                + P    S   +DFV K L+K+P  R    Q + H +++ 
Sbjct: 259 NEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKR 303

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  137 bits (347), Expect = 2e-38
 Identities = 42/187 (22%), Positives = 78/187 (41%), Gaps = 13/187 (6%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
            CEG  L    L   ++++       + RQ  +     H   ++HRD+K  N       E
Sbjct: 84  WCEGSSLYHH-LHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL---HE 139

Query: 105 DSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKRKS----GPESDVWSIGVIT 157
           D ++K  DFGL+          +F+ + GS  ++APEV++ +       +SDV++ G++ 
Sbjct: 140 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 199

Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNK--PDFRRKPWPSISNSAKDFVKKLLVKDPRARLT 215
           Y L+ G+ P+ +         ++          K   +   + K  + + L K    R  
Sbjct: 200 YELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSNCPKAMKRLMAECLKKKRDERPL 259

Query: 216 AAQALSH 222
             Q L+ 
Sbjct: 260 FPQILAS 266

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  135 bits (339), Expect = 5e-37
 Identities = 50/203 (24%), Positives = 82/203 (40%), Gaps = 27/203 (13%)

Query: 49  GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 108
            +L   +    +     +    ++ Q+LR     H H +VHRD+KP+N L  S      +
Sbjct: 99  QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTS---SGQI 155

Query: 109 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGRRPF 167
           K  DFGL+           +V + +Y APEVL + S     D+WS+G I   +   +  F
Sbjct: 156 KLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLF 215

Query: 168 WDKTEDGIFKEVLRNKPDFRRKPWP-----------------------SISNSAKDFVKK 204
              ++     ++L        + WP                        I    KD + K
Sbjct: 216 RGSSDVDQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLK 275

Query: 205 LLVKDPRARLTAAQALSHPWVRE 227
            L  +P  R++A  ALSHP+ ++
Sbjct: 276 CLTFNPAKRISAYSALSHPYFQD 298

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 337

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  135 bits (341), Expect = 6e-37
 Identities = 55/189 (29%), Positives = 92/189 (48%), Gaps = 16/189 (8%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
             GGEL   +   ++  +TE+ A     +++      H   +V+RD+K EN +     +D
Sbjct: 87  ANGGELFFHL--SRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD---KD 141

Query: 106 SSLKATDFGLSDFI-KPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCG 163
             +K TDFGL       G   +   G+  Y+APEVL+    G   D W +GV+ Y ++CG
Sbjct: 142 GHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCG 201

Query: 164 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQ 218
           R PF+++  + +F+ +L  +  F      ++S  AK  +  LL KDP+ RL      A +
Sbjct: 202 RLPFYNQDHERLFELILMEEIRF----PRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKE 257

Query: 219 ALSHPWVRE 227
            + H +   
Sbjct: 258 VMEHRFFLS 266

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  134 bits (337), Expect = 2e-36
 Identities = 55/224 (24%), Positives = 86/224 (38%), Gaps = 39/224 (17%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
             G +L   +   K    +       + Q+LR     H   ++HRD+KP N L       
Sbjct: 92  LMGADLYKLL---KTQHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TT 145

Query: 106 SSLKATDFGLSDFIKPGK----KFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYI 159
             LK  DFGL+    P         + V + +Y APE++          D+WS+G I   
Sbjct: 146 CDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAE 205

Query: 160 LLCGRRPFWDKTEDGIFKEVLR-----------------------NKPDFRRKPW----P 192
           +L  R  F  K        +L                        + P   + PW    P
Sbjct: 206 MLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFP 265

Query: 193 SISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 236
           +  + A D + K+L  +P  R+   QAL+HP++ +  D S+ PI
Sbjct: 266 NADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDPSDEPI 309

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score =  131 bits (330), Expect = 7e-36
 Identities = 55/204 (26%), Positives = 86/204 (42%), Gaps = 31/204 (15%)

Query: 52  LDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKAT 111
           L ++L   +       A   + Q+L   A CH   ++HRD+KP+N L      +  LK  
Sbjct: 86  LKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINR---EGELKIA 142

Query: 112 DFGLSDFI-KPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFW 168
           DFGL+     P +K+   + + +Y AP+VL   +K     D+WS+G I   ++ G   F 
Sbjct: 143 DFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFP 202

Query: 169 DKTEDGIFKEVLRNKPDFRRKPWPSI-------------------------SNSAKDFVK 203
             +E      + R       K WP++                           S  D + 
Sbjct: 203 GVSEADQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLS 262

Query: 204 KLLVKDPRARLTAAQALSHPWVRE 227
           K+L  DP  R+TA QAL H + +E
Sbjct: 263 KMLKLDPNQRITAKQALEHAYFKE 286

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  132 bits (334), Expect = 1e-35
 Identities = 47/190 (24%), Positives = 79/190 (41%), Gaps = 14/190 (7%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L  GG+L   +   +   ++E D      +++      H   +V+RD+KP N L     E
Sbjct: 88  LMNGGDLHYHL--SQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD---E 142

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLC 162
              ++ +D GL+      K     VG+  Y+APEVL++       +D +S+G + + LL 
Sbjct: 143 HGHVRISDLGLACDFSKKKPHA-SVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLR 201

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLT-----AA 217
           G  PF          E+ R       +   S S   +  ++ LL +D   RL      A 
Sbjct: 202 GHSPFRQHKTKDKH-EIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQ 260

Query: 218 QALSHPWVRE 227
           +    P+ R 
Sbjct: 261 EVKESPFFRS 270

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  130 bits (328), Expect = 3e-35
 Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 17/189 (8%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
             EGGEL    L +K  R+    A     ++       H   +++RD+KPEN L     +
Sbjct: 85  YIEGGELFS--LLRKSQRFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLD---K 139

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCG 163
           +  +K TDFG + ++        + G+  Y+APEV+  +      D WS G++ Y +L G
Sbjct: 140 NGHIKITDFGFAKYVP--DVTYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAG 197

Query: 164 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQ 218
             PF+D      ++++L  +  F     P  +   KD + +L+ +D   RL         
Sbjct: 198 YTPFYDSNTMKTYEKILNAELRF----PPFFNEDVKDLLSRLITRDLSQRLGNLQNGTED 253

Query: 219 ALSHPWVRE 227
             +HPW +E
Sbjct: 254 VKNHPWFKE 262

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  130 bits (328), Expect = 6e-35
 Identities = 50/211 (23%), Positives = 78/211 (36%), Gaps = 30/211 (14%)

Query: 45  LCEGGELLD-RILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK 103
                     R  ++           + + Q+ R  A  H  G+ HRD+KP+N L     
Sbjct: 100 YVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDP-- 157

Query: 104 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILL 161
           + + LK  DFG +  +  G+     + S YY APE++   +      DVWS G +   LL
Sbjct: 158 DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELL 217

Query: 162 CGRRPFWDKTEDGIFKEVLR--------------------NKPDFRRKPW-----PSISN 196
            G+  F   +      E+++                      P  +  PW     P    
Sbjct: 218 LGQPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPP 277

Query: 197 SAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
            A     +LL   P ARLT  +A +H +  E
Sbjct: 278 EAIALCSRLLEYTPTARLTPLEACAHSFFDE 308

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score =  128 bits (321), Expect = 4e-34
 Identities = 52/219 (23%), Positives = 87/219 (39%), Gaps = 43/219 (19%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
                +             T+ D    + ++L+    CH  G++HRD+KP N +     E
Sbjct: 113 HVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH--E 165

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS--GPESDVWSIGVITYILLC 162
              L+  D+GL++F  PG+++   V S Y+  PE+L          D+WS+G +   ++ 
Sbjct: 166 HRKLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIF 225

Query: 163 GRRPFWDKT------------------EDGIFKEVLRNKPDFRR---------------- 188
            + PF+                      D I K  +   P F                  
Sbjct: 226 RKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHS 285

Query: 189 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
           +    +S  A DF+ KLL  D ++RLTA +A+ HP+   
Sbjct: 286 ENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYT 324

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  127 bits (319), Expect = 5e-34
 Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 15/193 (7%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
              GGEL   +   +  R+TE +  + V +++      H  G+++RD+K EN L      
Sbjct: 110 YINGGELFTHL--SQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLD---S 164

Query: 105 DSSLKATDFGLSDFIKP--GKKFQDIVGSAYYVAPEVLKRKS---GPESDVWSIGVITYI 159
           +  +  TDFGLS        ++  D  G+  Y+AP++++          D WS+GV+ Y 
Sbjct: 165 NGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYE 224

Query: 160 LLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL----- 214
           LL G  PF    E     E+ R            +S  AKD +++LL+KDP+ RL     
Sbjct: 225 LLTGASPFTVDGEKNSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPR 284

Query: 215 TAAQALSHPWVRE 227
            A +   H + ++
Sbjct: 285 DADEIKEHLFFQK 297

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  126 bits (316), Expect = 1e-33
 Identities = 48/210 (22%), Positives = 76/210 (36%), Gaps = 32/210 (15%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
             E       I+       T       +   L+     H H ++HRD+KP N L     E
Sbjct: 81  FMETDLE--VIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLD---E 135

Query: 105 DSSLKATDFGLS-DFIKPGKKFQDIVGSAYYVAPEVLK--RKSGPESDVWSIGVITYILL 161
           +  LK  DFGL+  F  P + +   V + +Y APE+L   R  G   D+W++G I   LL
Sbjct: 136 NGVLKLADFGLAKSFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELL 195

Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWP------------------------SISNS 197
                    ++      +         + WP                        +  + 
Sbjct: 196 LRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDD 255

Query: 198 AKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
             D ++ L + +P AR+TA QAL   +   
Sbjct: 256 LLDLIQGLFLFNPCARITATQALKMKYFSN 285

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  125 bits (315), Expect = 2e-33
 Identities = 51/225 (22%), Positives = 81/225 (36%), Gaps = 40/225 (17%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
            CE              ++T  +   V++ +L      H + ++HRDMK  N L      
Sbjct: 98  FCEHDLAGLLS--NVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLIT---R 152

Query: 105 DSSLKATDFGLSDFIKPGKK-----FQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVIT 157
           D  LK  DFGL+      K      + + V + +Y  PE+L  +R  GP  D+W  G I 
Sbjct: 153 DGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIM 212

Query: 158 YILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN--------------------- 196
             +          TE      + +       + WP++ N                     
Sbjct: 213 AEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRL 272

Query: 197 -------SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEI 234
                   A D + KLLV DP  R+ +  AL+H +       S++
Sbjct: 273 KAYVRDPYALDLIDKLLVLDPAQRIDSDDALNHDFFWSDPMPSDL 317

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  121 bits (305), Expect = 2e-32
 Identities = 36/180 (20%), Positives = 63/180 (35%), Gaps = 10/180 (5%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
               G L+D + ++  S             +         +  VHRD+   N L     E
Sbjct: 82  YMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLV---SE 138

Query: 105 DSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILL-C 162
           D+  K +DFGL+      +          + APE L+ K    +SDVWS G++ + +   
Sbjct: 139 DNVAKVSDFGLTKEASSTQD--TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSF 196

Query: 163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH 222
           GR P+       +   V +    ++         +  + +K     D   R +  Q    
Sbjct: 197 GRVPYPRIPLKDVVPRVEKG---YKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQ 253

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  121 bits (304), Expect = 4e-32
 Identities = 47/213 (22%), Positives = 85/213 (39%), Gaps = 31/213 (14%)

Query: 43  IRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSA 102
           +      +L   + A   +          + Q+L+  A CH H ++HRD+KP+N L    
Sbjct: 79  VFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN-- 136

Query: 103 KEDSSLKATDFGLSDFI-KPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYI 159
             + ++K  DFGL+     P + +   V + +Y APE+L   +      D+WS+G I   
Sbjct: 137 -TEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAE 195

Query: 160 LLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS-------------------------I 194
           ++  R  F   +E      + R         WP                          +
Sbjct: 196 MVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPL 255

Query: 195 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE 227
               +  + ++L  DP  R++A  AL+HP+ ++
Sbjct: 256 DEDGRSLLSQMLHYDPNKRISAKAALAHPFFQD 288

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  121 bits (304), Expect = 4e-32
 Identities = 34/215 (15%), Positives = 71/215 (33%), Gaps = 19/215 (8%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L             +  +++ K   ++  QM+      H    +HRD+KP+NFL    K+
Sbjct: 84  LLGPSLEDLFNFCSR--KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKK 141

Query: 105 DSSLKATDFGLSDFIKPGKKFQ--------DIVGSAYYVAPEVLKRKS-GPESDVWSIGV 155
            + +   DFGL+   +  +  Q        ++ G+A Y +             D+ S+G 
Sbjct: 142 GNLVYIIDFGLAKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGY 201

Query: 156 ITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP----WPSISNSAKDFVKKLLVKDPR 211
           +      G  P+         ++  R        P         +    ++         
Sbjct: 202 VLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFD 261

Query: 212 ARLTAA---QALSHPWVREGGDASEIPIDISVLNN 243
            +   +   Q   + + R+G    +   D ++L  
Sbjct: 262 DKPDYSYLRQLFRNLFHRQGFS-YDYVFDWNMLKF 295

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (307), Expect = 5e-32
 Identities = 58/217 (26%), Positives = 93/217 (42%), Gaps = 36/217 (16%)

Query: 49  GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 108
           G  L +++  K  +  E     +V QML+     H  G++HRD+KP N       ED  L
Sbjct: 106 GTDLGKLM--KHEKLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVN---EDCEL 160

Query: 109 KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRP 166
           K  DFGL+       +    V + +Y APEV+    +     D+WS+G I   ++ G+  
Sbjct: 161 KILDFGLARQ--ADSEMTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTL 218

Query: 167 FWDKTEDGIFKEVLR-----------------------NKPDFRRKPWPSI----SNSAK 199
           F         KE+++                         P+  +K + SI    S  A 
Sbjct: 219 FKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAV 278

Query: 200 DFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 236
           + ++K+LV D   R+TA +AL+HP+     D  + P 
Sbjct: 279 NLLEKMLVLDAEQRVTAGEALAHPYFESLHDTEDEPQ 315

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (297), Expect = 3e-31
 Identities = 38/190 (20%), Positives = 65/190 (34%), Gaps = 16/190 (8%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           +  GG L   ++ K++      + A ++ Q+            VHRD+   N L      
Sbjct: 89  MAGGGPLHKFLVGKRE-EIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLL---VN 144

Query: 105 DSSLKATDFGLSDFIKPGKKFQD----IVGSAYYVAPEVLK-RKSGPESDVWSIGVITY- 158
               K +DFGLS  +     +            + APE +  RK    SDVWS GV  + 
Sbjct: 145 RHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWE 204

Query: 159 ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA- 217
            L  G++P+       +   + + K   R +  P         +    +     R     
Sbjct: 205 ALSYGQKPYKKMKGPEVMAFIEQGK---RMECPPECPPELYALMSDCWIYKWEDRPDFLT 261

Query: 218 --QALSHPWV 225
             Q +   + 
Sbjct: 262 VEQRMRACYY 271

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  118 bits (297), Expect = 3e-31
 Identities = 43/185 (23%), Positives = 66/185 (35%), Gaps = 12/185 (6%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
              G LLD +  +            +  Q+    A       VHRD++  N L     E+
Sbjct: 93  MSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV---GEN 149

Query: 106 SSLKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC 162
              K  DFGL+  I+  +    Q       + APE         +SDVWS G++   L  
Sbjct: 150 LVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTT 209

Query: 163 -GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 221
            GR P+       +  +V R    +R    P    S  D + +   K+P  R T     +
Sbjct: 210 KGRVPYPGMVNREVLDQVERG---YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQA 266

Query: 222 --HPW 224
               +
Sbjct: 267 FLEDY 271

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  119 bits (300), Expect = 5e-31
 Identities = 46/188 (24%), Positives = 82/188 (43%), Gaps = 17/188 (9%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKED 105
             GGE+   +  ++  R++E  A     Q++      H   L++RD+KPEN L     + 
Sbjct: 123 VAGGEMFSHL--RRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQ 177

Query: 106 SSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLCGR 164
             ++ TDFG +  +K   +   + G+   +APE++  K      D W++GV+ Y +  G 
Sbjct: 178 GYIQVTDFGFAKRVKG--RTWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGY 235

Query: 165 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQA 219
            PF+      I+++++  K  F        S+  KD ++ LL  D   R           
Sbjct: 236 PPFFADQPIQIYEKIVSGKVRF----PSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 291

Query: 220 LSHPWVRE 227
            +H W   
Sbjct: 292 KNHKWFAT 299

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (295), Expect = 6e-31
 Identities = 37/189 (19%), Positives = 68/189 (35%), Gaps = 17/189 (8%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           + E G L   +  +++    +K+   +V Q+            VHRD+   N L  +   
Sbjct: 88  MAELGPLNKYL--QQNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVT--- 142

Query: 105 DSSLKATDFGLSDFIKPGKKFQD----IVGSAYYVAPEVLK-RKSGPESDVWSIGVITYI 159
               K +DFGLS  ++  + +            + APE +   K   +SDVWS GV+ + 
Sbjct: 143 QHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWE 202

Query: 160 LLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 218
               G++P+       +   + + +   R            D +      D   R   A 
Sbjct: 203 AFSYGQKPYRGMKGSEVTAMLEKGE---RMGCPAGCPREMYDLMNLCWTYDVENRPGFAA 259

Query: 219 ---ALSHPW 224
               L + +
Sbjct: 260 VELRLRNYY 268

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  119 bits (299), Expect = 7e-31
 Identities = 51/220 (23%), Positives = 87/220 (39%), Gaps = 42/220 (19%)

Query: 56  LAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL 115
                     +  + ++ QML      H  G++HRD+KP N + KS   D +LK  DFGL
Sbjct: 109 CQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKS---DCTLKILDFGL 165

Query: 116 SDFIKPGKKFQDIVGSAYYVAPE-VLKRKSGPESDVWSIGVITYILLCGRRPFWDKTEDG 174
           +            V + YY APE +L        D+WS+G I   ++  +  F  +    
Sbjct: 166 ARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID 225

Query: 175 IFKEVLR----------------------NKPDFRRKPWPSI----------------SN 196
            + +V+                       N+P +    +P +                ++
Sbjct: 226 QWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKAS 285

Query: 197 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 236
            A+D + K+LV DP  R++   AL HP++    D +E+  
Sbjct: 286 QARDLLSKMLVIDPAKRISVDDALQHPYINVWYDPAEVEA 325

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  117 bits (294), Expect = 9e-31
 Identities = 47/194 (24%), Positives = 80/194 (41%), Gaps = 32/194 (16%)

Query: 63  YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS-DFIKP 121
              +     + Q+L+    CH   ++HRD+KP+N L      +  LK  +FGL+  F  P
Sbjct: 98  LDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINR---NGELKLANFGLARAFGIP 154

Query: 122 GKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWD-KTEDGIFKE 178
            + +   V + +Y  P+VL   +      D+WS G I   L    RP +     D   K 
Sbjct: 155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKR 214

Query: 179 VLRNKPDFRRKPWPS-------------------------ISNSAKDFVKKLLVKDPRAR 213
           + R       + WPS                         ++ + +D ++ LL  +P  R
Sbjct: 215 IFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQR 274

Query: 214 LTAAQALSHPWVRE 227
           ++A +AL HP+  +
Sbjct: 275 ISAEEALQHPYFSD 288

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (291), Expect = 6e-30
 Identities = 54/207 (26%), Positives = 82/207 (39%), Gaps = 34/207 (16%)

Query: 59  KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF 118
           K  + T+     ++ Q+LR     H   ++HRD+KP N       ED  LK  DFGL+  
Sbjct: 114 KCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVN---EDCELKILDFGLARH 170

Query: 119 IKPGKKFQDIVGSAYYVAPEVL--KRKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIF 176
                +    V + +Y APE++          D+WS+G I   LL GR  F         
Sbjct: 171 T--DDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 228

Query: 177 KEVLRNKPDFR---------------------------RKPWPSISNSAKDFVKKLLVKD 209
           K +LR                                    +   +  A D ++K+LV D
Sbjct: 229 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD 288

Query: 210 PRARLTAAQALSHPWVREGGDASEIPI 236
              R+TAAQAL+H +  +  D  + P+
Sbjct: 289 SDKRITAAQALAHAYFAQYHDPDDEPV 315

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (280), Expect = 7e-29
 Identities = 35/184 (19%), Positives = 56/184 (30%), Gaps = 12/184 (6%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L   G LLDR+  K    +     +    Q+            +HRD+   N L      
Sbjct: 91  LAPLGSLLDRL-RKHQGHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLL---AT 146

Query: 105 DSSLKATDFGLSDFIKPGKKFQ----DIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYI 159
              +K  DFGL   +                  + APE LK ++    SD W  GV  + 
Sbjct: 147 RDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWE 206

Query: 160 LLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQ 218
           +   G+ P+       I  ++ +      R           + + +     P  R T   
Sbjct: 207 MFTYGQEPWIGLNGSQILHKIDKEGERLPR--PEDCPQDIYNVMVQCWAHKPEDRPTFVA 264

Query: 219 ALSH 222
               
Sbjct: 265 LRDF 268

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]} Length = 258

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  111 bits (278), Expect = 1e-28
 Identities = 35/182 (19%), Positives = 65/182 (35%), Gaps = 11/182 (6%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
               G LL+  L +   R+  +    + + +            +HRD+   N L     +
Sbjct: 80  YMANGCLLN-YLREMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLV---ND 135

Query: 105 DSSLKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITY-IL 160
              +K +DFGLS ++   +            +  PEVL       +SD+W+ GV+ + I 
Sbjct: 136 QGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIY 195

Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
             G+ P+   T     + + +    +R       S      +     +    R T    L
Sbjct: 196 SLGKMPYERFTNSETAEHIAQGLRLYR---PHLASEKVYTIMYSCWHEKADERPTFKILL 252

Query: 221 SH 222
           S+
Sbjct: 253 SN 254

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]} Length = 272

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  111 bits (278), Expect = 2e-28
 Identities = 37/181 (20%), Positives = 65/181 (35%), Gaps = 10/181 (5%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
             E G L+D +      + T      +  Q+    A       +HRD++  N L      
Sbjct: 88  YMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLS 147

Query: 105 DSSLKATDFGLSDFIKPGKKF--QDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILL 161
               K  DFGL+  I+  +    +       + APE +       +SDVWS G++   ++
Sbjct: 148 C---KIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIV 204

Query: 162 C-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
             GR P+   T   + + + R    +R     +        ++    + P  R T     
Sbjct: 205 THGRIPYPGMTNPEVIQNLERG---YRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYLR 261

Query: 221 S 221
           S
Sbjct: 262 S 262

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  111 bits (278), Expect = 2e-28
 Identities = 45/186 (24%), Positives = 74/186 (39%), Gaps = 15/186 (8%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
             E G L D  L + D ++T      ++R +            VHRD+   N L      
Sbjct: 108 FMENGSL-DSFLRQNDGQFTVIQLVGMLRGIAAGMKYLADMNYVHRDLAARNILV---NS 163

Query: 105 DSSLKATDFGLSDFIKPGKKFQD------IVGSAYYVAPEVLK-RKSGPESDVWSIGVIT 157
           +   K +DFGLS F++                   + APE ++ RK    SDVWS G++ 
Sbjct: 164 NLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVM 223

Query: 158 Y-ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTA 216
           + ++  G RP+WD T   +   + +   D+R  P     ++    +     KD   R   
Sbjct: 224 WEVMSYGERPYWDMTNQDVINAIEQ---DYRLPPPMDCPSALHQLMLDCWQKDRNHRPKF 280

Query: 217 AQALSH 222
            Q ++ 
Sbjct: 281 GQIVNT 286

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 325

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  111 bits (278), Expect = 4e-28
 Identities = 41/204 (20%), Positives = 72/204 (35%), Gaps = 31/204 (15%)

Query: 45  LCEGGELLDRILAKKD---------------------SRYTEKDAAVVVRQMLRVAAECH 83
            C  G+LL+ + +K++                     +  T +D      Q+ +      
Sbjct: 122 YCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLE 181

Query: 84  LHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF---QDIVGSAYYVAPEVL 140
               VHRD+   N L         +K  DFGL+  I     +    +      ++APE L
Sbjct: 182 FKSCVHRDLAARNVLV---THGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESL 238

Query: 141 KRKS-GPESDVWSIGVITY-ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSA 198
                  +SDVWS G++ + I   G  P+     D  F ++++N   F+       +   
Sbjct: 239 FEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQN--GFKMDQPFYATEEI 296

Query: 199 KDFVKKLLVKDPRARLTAAQALSH 222
              ++     D R R +     S 
Sbjct: 297 YIIMQSCWAFDSRKRPSFPNLTSF 320

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  109 bits (274), Expect = 9e-28
 Identities = 39/194 (20%), Positives = 69/194 (35%), Gaps = 22/194 (11%)

Query: 45  LCEGGELLDRI--------------LAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR 90
               G LLD +                   S  + +        + R          +HR
Sbjct: 92  YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHR 151

Query: 91  DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESD 149
           D+   N L     E+   K  DFGLS   +   K         ++A E L        SD
Sbjct: 152 DLAARNILVG---ENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSD 208

Query: 150 VWSIGVITYILL-CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVK 208
           VWS GV+ + ++  G  P+   T   +++++ +    +R +   +  +   D +++   +
Sbjct: 209 VWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQG---YRLEKPLNCDDEVYDLMRQCWRE 265

Query: 209 DPRARLTAAQALSH 222
            P  R + AQ L  
Sbjct: 266 KPYERPSFAQILVS 279

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  108 bits (270), Expect = 1e-27
 Identities = 42/182 (23%), Positives = 69/182 (37%), Gaps = 11/182 (6%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           LC  GEL    L  +          +   Q+    A       VHRD+   N L  S   
Sbjct: 88  LCTLGELRS-FLQVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS--- 143

Query: 105 DSSLKATDFGLSDFIKPGKKFQ--DIVGSAYYVAPEVLK-RKSGPESDVWSIGVITY-IL 160
           +  +K  DFGLS +++    ++         ++APE +  R+    SDVW  GV  + IL
Sbjct: 144 NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 203

Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           + G +PF     + +   +   +   R    P+   +    + K    DP  R    +  
Sbjct: 204 MHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELK 260

Query: 221 SH 222
           + 
Sbjct: 261 AQ 262

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]} Length = 287

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  107 bits (267), Expect = 6e-27
 Identities = 34/180 (18%), Positives = 61/180 (33%), Gaps = 8/180 (4%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
               G LLD +        +      +  Q+            +HRD+   N L     E
Sbjct: 94  FMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLV---GE 150

Query: 105 DSSLKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILL 161
           +  +K  DFGLS  +                + APE L       +SDVW+ GV+ + + 
Sbjct: 151 NHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 210

Query: 162 CGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 221
                 +   +     E+L  + D+R +          + ++     +P  R + A+   
Sbjct: 211 TYGMSPYPGIDLSQVYELL--EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ 268

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  105 bits (264), Expect = 1e-26
 Identities = 32/182 (17%), Positives = 68/182 (37%), Gaps = 11/182 (6%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
             E G L D +   +   +  +    +   +    A      ++HRD+   N L     E
Sbjct: 81  FMEHGCLSDYLR-TQRGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVG---E 136

Query: 105 DSSLKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILL 161
           +  +K +DFG++ F+   +            + +PEV    +   +SDVWS GV+ + + 
Sbjct: 137 NQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVF 196

Query: 162 CGRRPFW-DKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
              +  + +++   + +++      FR       S      +     + P  R   ++ L
Sbjct: 197 SEGKIPYENRSNSEVVEDISTG---FRLYKPRLASTHVYQIMNHCWKERPEDRPAFSRLL 253

Query: 221 SH 222
             
Sbjct: 254 RQ 255

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 317

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  104 bits (261), Expect = 7e-26
 Identities = 40/182 (21%), Positives = 65/182 (35%), Gaps = 10/182 (5%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
           L   G LLD +   KD     +       Q+ +         LVHRD+   N L    K 
Sbjct: 91  LMPFGCLLDYVREHKD-NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLV---KT 146

Query: 105 DSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYIL 160
              +K TDFGL+  +   +K    +       ++A E +  +    +SDVWS GV  + L
Sbjct: 147 PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWEL 206

Query: 161 LCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
           +      +D         +L      R    P  +      + K  + D  +R    + +
Sbjct: 207 MTFGSKPYDGIPASEISSILEKGE--RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 264

Query: 221 SH 222
             
Sbjct: 265 IE 266

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  102 bits (255), Expect = 3e-25
 Identities = 40/188 (21%), Positives = 63/188 (33%), Gaps = 5/188 (2%)

Query: 37  LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 96
           LR+  + R   G E         + + + KD      Q+ R          +HRD+   N
Sbjct: 106 LREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARN 165

Query: 97  FLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGV 155
            L                    I   KK  +      ++APE L  R    +SDVWS GV
Sbjct: 166 VLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGV 225

Query: 156 ITY-ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL 214
           + + I   G  P+     + +FK +       R     + +N     ++      P  R 
Sbjct: 226 LLWEIFTLGGSPYPGVPVEELFKLLKEGH---RMDKPSNCTNELYMMMRDCWHAVPSQRP 282

Query: 215 TAAQALSH 222
           T  Q +  
Sbjct: 283 TFKQLVED 290

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score =  101 bits (253), Expect = 5e-25
 Identities = 33/188 (17%), Positives = 69/188 (36%), Gaps = 15/188 (7%)

Query: 49  GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF--KSAKEDS 106
           G  L+ +L     +++ K  A+  +QML      H   LV+RD+KP+NFL    ++K  +
Sbjct: 84  GPSLEDLLDLCGRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNAN 143

Query: 107 SLKATDFGLSDFIKPG--------KKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVIT 157
            +   DFG+  F +          ++ +++ G+A Y++      +      D+ ++G + 
Sbjct: 144 MIYVVDFGMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVF 203

Query: 158 YILLCGRRPFWDKTEDG----IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRAR 213
              L G  P+             +   + +    R+           ++         A 
Sbjct: 204 MYFLRGSLPWQGLKAATNKQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDAT 263

Query: 214 LTAAQALS 221
                   
Sbjct: 264 PDYDYLQG 271

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 301

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  101 bits (252), Expect = 8e-25
 Identities = 32/174 (18%), Positives = 61/174 (35%), Gaps = 11/174 (6%)

Query: 53  DRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATD 112
            R+ +      +  +   + RQ+    A       VHRD+   N L     E+  +K  D
Sbjct: 127 ARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVG---ENMVVKIAD 183

Query: 113 FGLSDFIKPGKKFQ---DIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRR-PF 167
           FGLS  I     ++   +      ++ PE +   +   ESDVW+ GV+ + +      P+
Sbjct: 184 FGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPY 243

Query: 168 WDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 221
           +    + +   V             +      + ++    K P  R +      
Sbjct: 244 YGMAHEEVIYYVRDGN---ILACPENCPLELYNLMRLCWSKLPADRPSFCSIHR 294

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  101 bits (251), Expect = 1e-24
 Identities = 37/185 (20%), Positives = 70/185 (37%), Gaps = 14/185 (7%)

Query: 45  LCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE 104
             + G+L +  +  +    T KD      Q+ +          VHRD+   N +     E
Sbjct: 110 YMKHGDLRN-FIRNETHNPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLD---E 165

Query: 105 DSSLKATDFGLSDFIKPGKKFQD-----IVGSAYYVAPEVLK-RKSGPESDVWSIGVITY 158
             ++K  DFGL+  +   +               ++A E L+ +K   +SDVWS GV+ +
Sbjct: 166 KFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLW 225

Query: 159 ILLCGRRPFW-DKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA 217
            L+    P + D     I   +L+ +   R        +   + + K        R + +
Sbjct: 226 ELMTRGAPPYPDVNTFDITVYLLQGR---RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFS 282

Query: 218 QALSH 222
           + +S 
Sbjct: 283 ELVSR 287

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 283

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.4 bits (244), Expect = 6e-24
 Identities = 34/178 (19%), Positives = 67/178 (37%), Gaps = 10/178 (5%)

Query: 49  GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL 108
              LD+ L +KD  ++      ++R +            VHRD+   N L      +   
Sbjct: 93  NGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILV---NSNLVC 149

Query: 109 KATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCG 163
           K +DFGLS  ++   +             + APE +  RK    SDVWS G++ + ++  
Sbjct: 150 KVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTY 209

Query: 164 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS 221
               + +  +    + + +   FR        ++    + +   ++   R   A  +S
Sbjct: 210 GERPYWELSNHEVMKAIND--GFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVS 265

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 99.7 bits (247), Expect = 8e-24
 Identities = 47/238 (19%), Positives = 81/238 (34%), Gaps = 47/238 (19%)

Query: 46  CEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH-GLVHRDMKPENFLFKSAKE 104
             G  LL  I   +           + +Q+L      H   G++H D+KPEN L +    
Sbjct: 105 VLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDS 164

Query: 105 DSSL-KATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKS-GPESDVWSIGVITYILLC 162
             +L +     L +     + + + + +  Y +PEVL     G  +D+WS   + + L+ 
Sbjct: 165 PENLIQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELIT 224

Query: 163 GRRPFWDKTEDGIFKEV---------------------------------LRNKPDFRRK 189
           G   F         K+                                  LRN    +  
Sbjct: 225 GDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFW 284

Query: 190 PWPSI-----------SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPI 236
           P   +           +    DF+  +L  DPR R  A   ++HPW+++     EI +
Sbjct: 285 PLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTLGMEEIRV 342

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 98.0 bits (243), Expect = 2e-23
 Identities = 44/197 (22%), Positives = 68/197 (34%), Gaps = 26/197 (13%)

Query: 45  LCEGGELLDRILAKKDS----------------RYTEKDAAVVVRQMLRVAAECHLHGLV 88
            C  G+LL+ +  K+DS                    +D      Q+ +  A       +
Sbjct: 108 YCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCI 167

Query: 89  HRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQ---DIVGSAYYVAPEVLKRK-S 144
           HRD+   N L          K  DFGL+  IK    +    +      ++APE +     
Sbjct: 168 HRDLAARNILL---THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVY 224

Query: 145 GPESDVWSIGVITYILLCGRRP-FWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVK 203
             ESDVWS G+  + L       +     D  F ++++    FR            D +K
Sbjct: 225 TFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKE--GFRMLSPEHAPAEMYDIMK 282

Query: 204 KLLVKDPRARLTAAQAL 220
                DP  R T  Q +
Sbjct: 283 TCWDADPLKRPTFKQIV 299

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 88.7 bits (219), Expect = 1e-21
 Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 13/152 (8%)

Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 321
           +S L +E++A+ ++ F   D D NGSIS  E+   +         E+ V +++  ID + 
Sbjct: 1   SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSL-GLSPSEAEVNDLMNEIDVDG 59

Query: 322 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG- 380
           +  ++FSEF+A      +  + + E        AF+ FD + DG I+  EL+      G 
Sbjct: 60  NHQIEFSEFLALMSRQLKSNDSEQELLE-----AFKVFDKNGDGLISAAELKHVLTSIGE 114

Query: 381 -----SIDPLLEEADIDKDGRISLSEFRRLLR 407
                 +D +L E   D  G I++ +F  LL 
Sbjct: 115 KLTDAEVDDMLREVS-DGSGEINIQQFAALLS 145

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 46.4 bits (109), Expect = 7e-07
 Identities = 23/129 (17%), Positives = 52/129 (40%), Gaps = 3/129 (2%)

Query: 204 KLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVKYSRLKQFALRALAS 263
            L  KD    +++++ L+      G   SE  ++  +              +F       
Sbjct: 17  ALFDKDNNGSISSSE-LATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQ 75

Query: 264 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 323
              ++   +L + F   D + +G IS  E++  L   +  KL ++ V ++L+ +  +  G
Sbjct: 76  LKSNDSEQELLEAFKVFDKNGDGLISAAELKHVL-TSIGEKLTDAEVDDMLREVS-DGSG 133

Query: 324 LVDFSEFVA 332
            ++  +F A
Sbjct: 134 EINIQQFAA 142

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]} Length = 308

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 92.6 bits (229), Expect = 1e-21
 Identities = 37/202 (18%), Positives = 78/202 (38%), Gaps = 25/202 (12%)

Query: 45  LCEGGELLDRILAKKDSR--------YTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 96
           L   G+L   + + + +          +      +  ++    A  + +  VHRD+   N
Sbjct: 104 LMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARN 163

Query: 97  FLFKSAKEDSSLKATDFGLSDFIKPG---KKFQDIVGSAYYVAPEVLKRKS-GPESDVWS 152
            +     ED ++K  DFG++  I      +K    +    +++PE LK       SDVWS
Sbjct: 164 CMVA---EDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWS 220

Query: 153 IGVITY-ILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPR 211
            GV+ + I     +P+   + + + + V+            +  +   + ++     +P+
Sbjct: 221 FGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG---LLDKPDNCPDMLFELMRMCWQYNPK 277

Query: 212 ARLTAAQALS------HPWVRE 227
            R +  + +S       P  RE
Sbjct: 278 MRPSFLEIISSIKEEMEPGFRE 299

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 90.7 bits (224), Expect = 4e-21
 Identities = 38/191 (19%), Positives = 64/191 (33%), Gaps = 10/191 (5%)

Query: 37  LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPEN 96
           L    R +  E                T +       Q+ +          +HRD+   N
Sbjct: 105 LSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARN 164

Query: 97  FLFKSAKEDSSLKATDFGLSDFIKPGKKFQ---DIVGSAYYVAPEVLK-RKSGPESDVWS 152
            L     E + +K  DFGL+  I     +    D      ++APE +  R    +SDVWS
Sbjct: 165 ILLS---EKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWS 221

Query: 153 IGVITYILLCGRR-PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPR 211
            GV+ + +      P+     D  F   L+     R   +   +      +      +P 
Sbjct: 222 FGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGTRMRAPDY--TTPEMYQTMLDCWHGEPS 279

Query: 212 ARLTAAQALSH 222
            R T ++ + H
Sbjct: 280 QRPTFSELVEH 290

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 162

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 87.3 bits (215), Expect = 4e-21
 Identities = 39/150 (26%), Positives = 69/150 (46%), Gaps = 9/150 (6%)

Query: 263 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 322
           + L +E +A+ +  FD  D D  G IS +E+   +         +  +  I++ +D +  
Sbjct: 12  AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRML-GQNPTKEELDAIIEEVDEDGS 70

Query: 323 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS- 381
           G +DF EF+   +   + +     +  L     F  FD + DGFI  EEL       G  
Sbjct: 71  GTIDFEEFLVMMVRQMKEDAKGKSEEELA--NCFRIFDKNADGFIDIEELGEILRATGEH 128

Query: 382 -----IDPLLEEADIDKDGRISLSEFRRLL 406
                I+ L++++D + DGRI   EF +++
Sbjct: 129 VTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 158

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]} Length = 303

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.7 bits (219), Expect = 2e-20
 Identities = 37/211 (17%), Positives = 71/211 (33%), Gaps = 38/211 (18%)

Query: 45  LCEGGELLDRILAKKDS-----RYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLF 99
             E G L D +     +     +     A+ +    + +        + HRD+K +N L 
Sbjct: 82  YHEHGSLFDYLNRYTVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV 141

Query: 100 KSAKEDSSLKATDFGLSDFIKPGKKFQD-----IVGSAYYVAPEVLKR-------KSGPE 147
              K++ +    D GL+          D      VG+  Y+APEVL         +S   
Sbjct: 142 ---KKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFKR 198

Query: 148 SDVWSIGVITYILLCGRRPF---------------WDKTEDGIFKEVLRNKPDFR---RK 189
           +D++++G++ + +                       D + + + K V   K       R 
Sbjct: 199 ADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRW 258

Query: 190 PWPSISNSAKDFVKKLLVKDPRARLTAAQAL 220
                       +++    +  ARLTA +  
Sbjct: 259 QSCEALRVMAKIMRECWYANGAARLTALRIK 289

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

 Score = 84.2 bits (207), Expect = 4e-20
 Identities = 39/150 (26%), Positives = 76/150 (50%), Gaps = 12/150 (8%)

Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           L +E++A+ ++ F   D D +G+I+ +E+   +         E+ + +++  +D + +G 
Sbjct: 3   LTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSL-GQNPTEAELQDMINEVDADGNGT 61

Query: 325 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL------ 378
           +DF EF++      + ++ + E        AF+ FD D +G I+  ELR           
Sbjct: 62  IDFPEFLSLMARKMKEQDSEEELIE-----AFKVFDRDGNGLISAAELRHVMTNLGEKLT 116

Query: 379 KGSIDPLLEEADIDKDGRISLSEFRRLLRT 408
              +D ++ EADID DG I+  EF R++ +
Sbjct: 117 DDEVDEMIREADIDGDGHINYEEFVRMMVS 146

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 156

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 83.5 bits (205), Expect = 1e-19
 Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 10/156 (6%)

Query: 259 RALASTLDDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAI 317
           +A    L +E+  + +  FD   +  ++GSIS +E+ + + + L        + E++  +
Sbjct: 2   KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVM-RMLGQNPTPEELQEMIDEV 60

Query: 318 DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG 377
           D +  G VDF EF+   +   + +     +  L     F  FD + DG+I  EEL++   
Sbjct: 61  DEDGSGTVDFDEFLVMMVRSMKDDSKGKSEEELS--DLFRMFDKNADGYIDLEELKIMLQ 118

Query: 378 LKGS------IDPLLEEADIDKDGRISLSEFRRLLR 407
             G       I+ L+++ D + DGRI   EF   ++
Sbjct: 119 ATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK 154

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 187

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 83.0 bits (204), Expect = 3e-19
 Identities = 34/177 (19%), Positives = 65/177 (36%), Gaps = 28/177 (15%)

Query: 251 SRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 308
           S+LK   +  L       ++E+      F       +G +     ++   +  P+     
Sbjct: 3   SKLKPEVVEELTRKTYFTEKEVQQWYKGFI--KDCPSGQLDAAGFQKIYKQFFPFGDPTK 60

Query: 309 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 368
               +    D N DG ++FSEF+ A      L          + + AF+ +D+D DG+IT
Sbjct: 61  FATFVFNVFDENKDGRIEFSEFIQA------LSVTSRGTLDEKLRWAFKLYDLDNDGYIT 114

Query: 369 PEELRM------------------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 407
             E+                        +  +D +    D + DG+++L EF+   +
Sbjct: 115 RNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEGSK 171

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]} Length = 181

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 81.8 bits (201), Expect = 6e-19
 Identities = 36/177 (20%), Positives = 72/177 (40%), Gaps = 28/177 (15%)

Query: 251 SRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 308
           S+L+   ++ L  +    + E+ +    F       +G +S+EE ++      P+     
Sbjct: 2   SKLRPEVMQDLLESTDFTEHEIQEWYKGFL--RDCPSGHLSMEEFKKIYGNFFPYGDASK 59

Query: 309 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 368
               + +  D N DG +DF EF+ A     + +     KW      AF  +D+D +G+I+
Sbjct: 60  FAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKW------AFSMYDLDGNGYIS 113

Query: 369 PEELRM------------------HTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 407
             E+                     +  +   + +  + D ++DG++SL EF R  +
Sbjct: 114 KAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIRGAK 170

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} Length = 187

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

 Score = 81.2 bits (199), Expect = 1e-18
 Identities = 31/163 (19%), Positives = 61/163 (37%), Gaps = 20/163 (12%)

Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP---------WKLKESRVLEILQ 315
            +   +   +  F+ +DV+ NG ISL+EM    +  +           K  +  V     
Sbjct: 6   DNPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFG 65

Query: 316 AIDCNTDGLVDFSEFV-----AATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 370
                     D+  ++      AT  + +  +++     +   A F+  D D++G IT +
Sbjct: 66  GAGMKYGVETDWPAYIEGWKKLATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLD 125

Query: 371 ELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLLR 407
           E + +T   G        +      DID+ G++ + E  R   
Sbjct: 126 EWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHL 168

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]} Length = 187

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

 Score = 39.2 bits (90), Expect = 3e-04
 Identities = 25/152 (16%), Positives = 44/152 (28%), Gaps = 2/152 (1%)

Query: 197 SAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDASEIPIDISVLNNMRQFVK-YSRLKQ 255
           S  + V K             +                 +   V  +   +++ + +L  
Sbjct: 30  SLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKKLAT 89

Query: 256 FALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQ 315
             L   A              FD +D D+NG+I+L+E +    K            E  +
Sbjct: 90  DELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYT-KAAGIIQSSEDCEETFR 148

Query: 316 AIDCNTDGLVDFSEFVAATLHVHQLEEHDSEK 347
             D +  G +D  E     L      +   EK
Sbjct: 149 VCDIDESGQLDVDEMTRQHLGFWYTMDPACEK 180

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]} Length = 141

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.2 bits (194), Expect = 2e-18
 Identities = 38/146 (26%), Positives = 75/146 (51%), Gaps = 12/146 (8%)

Query: 267 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD 326
           +E+  ++R+ FD  D D  G+I ++E+ +   + L ++ K+  + +++  ID    G ++
Sbjct: 2   EEQKQEIREAFDLFDADGTGTIDVKEL-KVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 60

Query: 327 FSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------ 380
           F +F+          E D+++  L+   AF+ FD D  G I+ + L+      G      
Sbjct: 61  FGDFLTVMTQKMS--EKDTKEEILK---AFKLFDDDETGKISFKNLKRVAKELGENLTDE 115

Query: 381 SIDPLLEEADIDKDGRISLSEFRRLL 406
            +  +++EAD D DG +S  EF R++
Sbjct: 116 ELQEMIDEADRDGDGEVSEQEFLRIM 141

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 190

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 75.6 bits (185), Expect = 1e-16
 Identities = 36/178 (20%), Positives = 69/178 (38%), Gaps = 28/178 (15%)

Query: 251 SRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES 308
           S+L +  L  L  +   D  E+      F  +    +G ++ E+  +   +  P+   E 
Sbjct: 6   SKLSKDDLTCLKQSTYFDRREIQQWHKGF--LRDCPSGQLAREDFVKIYKQFFPFGSPED 63

Query: 309 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 368
               +    D + +G + F EF+       +    +   W      AFE +D++ DG+IT
Sbjct: 64  FANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEEKLSW------AFELYDLNHDGYIT 117

Query: 369 PEELR----MHTGLKGS--------------IDPLLEEADIDKDGRISLSEFRRLLRT 408
            +E+         + GS              +  + +  D ++DG I+L EFR   + 
Sbjct: 118 FDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREGSKV 175

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 87

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

 Score = 72.3 bits (177), Expect = 1e-16
 Identities = 27/78 (34%), Positives = 50/78 (64%), Gaps = 1/78 (1%)

Query: 259 RALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID 318
           + +A  L +EE+  L++ F  ID D +G+I+ +E++  L K +  +L ES + +++ A D
Sbjct: 11  KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGL-KRVGSELMESEIKDLMDAAD 69

Query: 319 CNTDGLVDFSEFVAATLH 336
            +  G +D+ EF+AAT+H
Sbjct: 70  IDKSGTIDYGEFIAATVH 87

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 87

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

 Score = 51.9 bits (124), Expect = 2e-09
 Identities = 27/89 (30%), Positives = 38/89 (42%), Gaps = 14/89 (15%)

Query: 320 NTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK 379
           ++ G +D  +   A        E  SE+     +  F+  D D  G IT +EL+      
Sbjct: 1   HSSGHIDDDDKHMA--------ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRV 52

Query: 380 GS------IDPLLEEADIDKDGRISLSEF 402
           GS      I  L++ ADIDK G I   EF
Sbjct: 53  GSELMESEIKDLMDAADIDKSGTIDYGEF 81

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} Length = 174

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

 Score = 75.1 bits (183), Expect = 1e-16
 Identities = 24/155 (15%), Positives = 46/155 (29%), Gaps = 15/155 (9%)

Query: 267 DEELADLRDQFDAIDVDKNGSISLEEMRQALAK----------DLPWKLKESRVLEILQA 316
           D  +  ++  F+ ID DK+G+I+  +      +               +     +     
Sbjct: 2   DLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFL 61

Query: 317 IDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR--- 373
                   +D + F+  ++                    F   D + D  I+ +E     
Sbjct: 62  TAVAGGKGIDETTFI-NSMKEMVKNPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFF 120

Query: 374 -MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 407
            M    K       +  D + DG +SL EF     
Sbjct: 121 GMLGLDKTMAPASFDAIDTNNDGLLSLEEFVIAGS 155

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} Length = 174

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

 Score = 38.5 bits (88), Expect = 5e-04
 Identities = 12/75 (16%), Positives = 21/75 (28%), Gaps = 17/75 (22%)

Query: 345 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEE---------------- 388
           S+ W  + +  F + D D+DG IT  +             +  E                
Sbjct: 1   SDLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNF 60

Query: 389 -ADIDKDGRISLSEF 402
              +     I  + F
Sbjct: 61  LTAVAGGKGIDETTF 75

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]} Length = 174

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

 Score = 36.6 bits (83), Expect = 0.002
 Identities = 20/83 (24%), Positives = 31/83 (37%), Gaps = 3/83 (3%)

Query: 266 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 325
                  L   F A+D +++ +IS +E            L ++       AID N DGL+
Sbjct: 89  KSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGM---LGLDKTMAPASFDAIDTNNDGLL 145

Query: 326 DFSEFVAATLHVHQLEEHDSEKW 348
              EFV A       +   + K 
Sbjct: 146 SLEEFVIAGSDFFMNDGDSTNKV 168

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]} Length = 176

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

 Score = 74.3 bits (181), Expect = 2e-16
 Identities = 26/169 (15%), Positives = 49/169 (28%), Gaps = 21/169 (12%)

Query: 272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLP--------------WKLKESRVLEILQAI 317
            L+ +FD  D D NG++   +  +                               + +  
Sbjct: 8   RLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEA 67

Query: 318 DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS--QAAFEKFDIDRDGFITPEELRMH 375
              +DG +   +F+  T ++   +   S    L    +      D + DG I  +E    
Sbjct: 68  GVGSDGSLTEEQFIRVTENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAW 127

Query: 376 TGLKGS----IDPLLEEADIDKDGRISLSEFRRLLRTASISSRNVPPSP 420
               G           + D + +G +SL E    +R      R      
Sbjct: 128 LTALGMSKAEAAEAFNQVDTNGNGELSLDELLTAVR-DFHFGRLDVELL 175

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 178

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 73.7 bits (180), Expect = 4e-16
 Identities = 35/161 (21%), Positives = 61/161 (37%), Gaps = 26/161 (16%)

Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
               EL  L   F   +   +G ++ E  +Q  A+  P     +    +  A D    G 
Sbjct: 10  FTKRELQVLYRGFK--NECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGS 67

Query: 325 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHT-------- 376
           V F +FV A   + +   H+  +W       F  +DI++DG+I  EE+            
Sbjct: 68  VKFEDFVTALSILLRGTVHEKLRW------TFNLYDINKDGYINKEEMMDIVKAIYDMMG 121

Query: 377 ----------GLKGSIDPLLEEADIDKDGRISLSEFRRLLR 407
                       +  +D   ++ D +KDG ++L EF    +
Sbjct: 122 KYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLESCQ 162

>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]} Length = 182

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

 Score = 72.4 bits (176), Expect = 1e-15
 Identities = 50/150 (33%), Positives = 86/150 (57%), Gaps = 11/150 (7%)

Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 321
           A  L +EE+  L++ F  ID D +G+I+ +E++  L K +  +L ES + +++ A D + 
Sbjct: 1   AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGL-KRVGSELMESEIKDLMDAADIDK 59

Query: 322 DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG- 380
            G +D+ EF+AAT+H+++LE  +         +AF  FD D  G+IT +E++      G 
Sbjct: 60  SGTIDYGEFIAATVHLNKLEREE------NLVSAFSYFDKDGSGYITLDEIQQACKDFGL 113

Query: 381 ---SIDPLLEEADIDKDGRISLSEFRRLLR 407
               ID +++E D D DG+I   EF  ++R
Sbjct: 114 DDIHIDDMIKEIDQDNDGQIDYGEFAAMMR 143

>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} Length = 139

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 70.4 bits (171), Expect = 3e-15
 Identities = 28/142 (19%), Positives = 55/142 (38%), Gaps = 11/142 (7%)

Query: 272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAI--DCNTDGLVDFSE 329
           + ++ F+  D   +G I   +    + + L      + VL++L     D      VDF  
Sbjct: 1   EFKEAFELFDRVGDGKILYSQCGDVM-RALGQNPTNAEVLKVLGNPKSDELKSRRVDFET 59

Query: 330 FVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGSIDPL- 385
           F+     V +     + + +L     F  FD + +G +   ELR      G K + + + 
Sbjct: 60  FLPMLQAVAKNRGQGTYEDYL---EGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVE 116

Query: 386 -LEEADIDKDGRISLSEFRRLL 406
            +     D +G I+   F + +
Sbjct: 117 TVLAGHEDSNGCINYEAFLKHI 138

>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]} Length = 139

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (89), Expect = 3e-04
 Identities = 14/62 (22%), Positives = 27/62 (43%), Gaps = 2/62 (3%)

Query: 274 RDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAA 333
            + F   D + NG +   E+R      L  K+ E  V  +L     +++G +++  F+  
Sbjct: 80  LEGFRVFDKEGNGKVMGAELRHV-LTTLGEKMTEEEVETVLAG-HEDSNGCINYEAFLKH 137

Query: 334 TL 335
            L
Sbjct: 138 IL 139

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]} Length = 189

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

 Score = 71.6 bits (174), Expect = 3e-15
 Identities = 28/163 (17%), Positives = 60/163 (36%), Gaps = 20/163 (12%)

Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKD----LPWKLKESRVLEILQAID-- 318
            +   +   +  FD +D++ NG I+L+E+    + D    L    ++++  ++       
Sbjct: 8   DNPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFR 67

Query: 319 ---CNTDGLVDFSEFVAA-----TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 370
                    + F +F+       T  + +   ++         A F+ FD D  G IT +
Sbjct: 68  GCGMEYGKEIAFPQFLDGWKQLATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLD 127

Query: 371 ELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLR 407
           E + +  + G        +      D+D  G + + E  R   
Sbjct: 128 EWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHL 170

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 68.4 bits (167), Expect = 5e-15
 Identities = 27/108 (25%), Positives = 41/108 (37%), Gaps = 18/108 (16%)

Query: 312 EILQAID-CNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 370
           +I +A+D    +G  +  +F A             +         F+  D D  GFI  E
Sbjct: 10  DIKKALDAVKAEGSFNHKKFFALVGLKAMSANDVKK--------VFKAIDADASGFIEEE 61

Query: 371 ELRMH------TGLKGS---IDPLLEEADIDKDGRISLSEFRRLLRTA 409
           EL+         G   +       L+ AD D DG+I + EF  L+  A
Sbjct: 62  ELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDEFETLVHEA 109

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 51.1 bits (122), Expect = 7e-09
 Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK--DLPWKLKESRVLEILQAIDC 319
              L      D++  F AID D +G I  EE++  L         L ++     L+A D 
Sbjct: 32  LVGLKAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADK 91

Query: 320 NTDGLVDFSEFVA 332
           + DG +   EF  
Sbjct: 92  DGDGKIGIDEFET 104

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 185

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

 Score = 69.7 bits (169), Expect = 1e-14
 Identities = 25/165 (15%), Positives = 53/165 (32%), Gaps = 22/165 (13%)

Query: 265 LDDEELADLRDQFDAI-DVDKNGSISLEEMRQALAKDLPW--------------KLKESR 309
           L+D +   ++  FD   D++ +GSI   +    + +                     E  
Sbjct: 2   LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDE 61

Query: 310 VLEILQAIDCNTDGLVDFSEFVAA---TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGF 366
             ++    D N D +V + E++A    T+   +           R    F+  D+  DG 
Sbjct: 62  WRDLKGRADINKDDVVSWEEYLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGI 121

Query: 367 ITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLR 407
           +  EE + +          +  +             L+ ++ L  
Sbjct: 122 VDLEEFQNYCKNFQLQCADVPAVYNVITDGGKVTFDLNRYKELYY 166

>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 183

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin B-like protein 2
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 68.8 bits (167), Expect = 3e-14
 Identities = 37/161 (22%), Positives = 63/161 (39%), Gaps = 23/161 (14%)

Query: 263 STLDDEELADLRDQFDAID--VDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 320
           +     E+  L + F  I   V  +G I+ EE + AL K    +        +    D  
Sbjct: 9   TVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFKTNKKESLF--ADRVFDLFDTK 66

Query: 321 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR------- 373
            +G++ F EF            H +     +   +F+ +D+ + GFI  +E++       
Sbjct: 67  HNGILGFEEF-----ARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATL 121

Query: 374 -------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 407
                    T ++  ID   EEAD   DG+I   E+R L+ 
Sbjct: 122 AESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSLVL 162

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]} Length = 201

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Recoverin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 68.3 bits (166), Expect = 5e-14
 Identities = 33/181 (18%), Positives = 63/181 (34%), Gaps = 30/181 (16%)

Query: 249 KYSRLKQFALRALAST--LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLK 306
           K   L +  L  L       +EEL+     F       +G I+ +E +   +K  P    
Sbjct: 4   KSGALSKEILEELQLNTKFTEEELSSWYQSFL--KECPSGRITRQEFQTIYSKFFPEADP 61

Query: 307 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGF 366
           ++    + ++ D N+DG +DF E+V A       + +   +W      AF  +D+D +G 
Sbjct: 62  KAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEW------AFSLYDVDGNGT 115

Query: 367 ITPEEL--------------------RMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLL 406
           I+  E+                          +   + +        D +++  EF    
Sbjct: 116 ISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEFIEGT 175

Query: 407 R 407
            
Sbjct: 176 L 176

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]} Length = 189

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 66.0 bits (160), Expect = 2e-13
 Identities = 37/167 (22%), Positives = 67/167 (40%), Gaps = 31/167 (18%)

Query: 265 LDDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 323
           +   + A L++ +     +  +G++ + E ++   K    +     V  + +A D N D 
Sbjct: 15  VGAADAAQLQEWYKKFLEECPSGTLFMHEFKRFF-KVPDNEEATQYVEAMFRAFDTNGDN 73

Query: 324 LVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEE----LRMHTGLK 379
            +DF E+VAA   V +       KW       F+ +D DR+G I  +E    +     LK
Sbjct: 74  TIDFLEYVAALNLVLRGTLEHKLKW------TFKIYDKDRNGCIDRQELLDIVESIYKLK 127

Query: 380 GS-------------------IDPLLEEADIDKDGRISLSEFRRLLR 407
            +                   +D +    D + DG++SL+EF    R
Sbjct: 128 KACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGAR 174

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

 Score = 63.1 bits (153), Expect = 5e-13
 Identities = 27/114 (23%), Positives = 41/114 (35%), Gaps = 19/114 (16%)

Query: 305 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRD 364
           LK   + + + A      G  D+  F        + +           +  FE  D D+ 
Sbjct: 6   LKADDINKAISA--FKDPGTFDYKRFFHLVGLKGKTDAQ--------VKEVFEILDKDQS 55

Query: 365 GFITPEELR------MHTGLKGS---IDPLLEEADIDKDGRISLSEFRRLLRTA 409
           GFI  EEL+         G   +      LL   D D DG+I   EF +++  A
Sbjct: 56  GFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQA 109

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

 Score = 50.3 bits (120), Expect = 1e-08
 Identities = 16/77 (20%), Positives = 32/77 (41%), Gaps = 4/77 (5%)

Query: 258 LRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK--DLPWKLKESRVLEILQ 315
              +      +    +++ F+ +D D++G I  EE++  L         L ++    +L 
Sbjct: 30  FHLVGLKGKTDA--QVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLA 87

Query: 316 AIDCNTDGLVDFSEFVA 332
           A D + DG +   EF  
Sbjct: 88  AGDSDHDGKIGADEFAK 104

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]} Length = 180

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.0 bits (155), Expect = 1e-12
 Identities = 37/162 (22%), Positives = 65/162 (40%), Gaps = 24/162 (14%)

Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW--KLKESRVLE-ILQAIDCNT 321
           L  +E+     +F  +   +  S+      Q   + +    +LK +   E I +    + 
Sbjct: 11  LTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLPELKANPFKERICRVFSTSP 70

Query: 322 -DGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR------- 373
               + F +F+            D +  +     AF  FD D DG +  E+L        
Sbjct: 71  AKDSLSFEDFLDLLSVFSDTATPDIKSHY-----AFRIFDFDDDGTLNREDLSRLVNCLT 125

Query: 374 --------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 407
                     + +K  ID +LEE+DID+DG I+LSEF+ ++ 
Sbjct: 126 GEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVIS 167

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 61.9 bits (150), Expect = 1e-12
 Identities = 27/112 (24%), Positives = 41/112 (36%), Gaps = 19/112 (16%)

Query: 305 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRD 364
           LK++ V   L A  C+        EF A            + K     + AF   D D+ 
Sbjct: 5   LKDADVAAALAA--CSAADSFKHKEFFAKVGL--------ASKSLDDVKKAFYVIDQDKS 54

Query: 365 GFITPEELRMHTGLKGSIDP---------LLEEADIDKDGRISLSEFRRLLR 407
           GFI  +EL++                    L + D D DG I + EF  +++
Sbjct: 55  GFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMIK 106

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]} Length = 107

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

 Score = 50.7 bits (121), Expect = 8e-09
 Identities = 21/73 (28%), Positives = 33/73 (45%), Gaps = 2/73 (2%)

Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW--KLKESRVLEILQAIDC 319
              L  + L D++  F  ID DK+G I  +E++  L    P    L ++     L   D 
Sbjct: 31  KVGLASKSLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDK 90

Query: 320 NTDGLVDFSEFVA 332
           + DG++   EF A
Sbjct: 91  DGDGMIGVDEFAA 103

>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]} Length = 165

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin regulatory subunit (B-chain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.2 bits (152), Expect = 1e-12
 Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 13/163 (7%)

Query: 261 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN 320
           + S  D +E+  L  +F  +D+D +GS+S+EE        LP   +   V  ++   D +
Sbjct: 6   MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEF-----MSLPELQQNPLVQRVIDIFDTD 60

Query: 321 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG--- 377
            +G VDF EF+         +    +K     +      D         + L+M  G   
Sbjct: 61  GNGEVDFKEFIEGVSQFSV-KGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNL 119

Query: 378 ----LKGSIDPLLEEADIDKDGRISLSEFRRLLRTASISSRNV 416
               L+  +D  +  AD D DGRIS  EF  ++    I  + V
Sbjct: 120 KDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGLDIHKKMV 162

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 77

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 60.4 bits (146), Expect = 2e-12
 Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 1/71 (1%)

Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 321
           +S L +E++A+ ++ F   D D NGSIS  E+     + L     E+ V +++  ID + 
Sbjct: 1   SSNLTEEQIAEFKEAFALFDKDNNGSISSSELATV-MRSLGLSPSEAEVNDLMNEIDVDG 59

Query: 322 DGLVDFSEFVA 332
           +  ++FSEF+A
Sbjct: 60  NHQIEFSEFLA 70

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 77

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 44.2 bits (104), Expect = 1e-06
 Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 6/60 (10%)

Query: 353 QAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLL 406
           + AF  FD D +G I+  EL       G       ++ L+ E D+D + +I  SEF  L+
Sbjct: 13  KEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALM 72

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 60.3 bits (146), Expect = 4e-12
 Identities = 20/107 (18%), Positives = 43/107 (40%), Gaps = 18/107 (16%)

Query: 312 EILQAI-DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE 370
           +I  A+ +C      +  +F   +          S+    + +  F   D D+ G++  +
Sbjct: 10  DIAAALQECQDPDTFEPQKFFQTS--------GLSKMSASQVKDIFRFIDNDQSGYLDGD 61

Query: 371 ELR------MHTGLKGSIDP---LLEEADIDKDGRISLSEFRRLLRT 408
           EL+           + +      L++ AD D DG+I   EF+ ++ +
Sbjct: 62  ELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMVHS 108

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 108

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 55.7 bits (134), Expect = 2e-10
 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 2/73 (2%)

Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK--DLPWKLKESRVLEILQAIDC 319
            S L     + ++D F  ID D++G +  +E++  L K      +L ES    ++ A D 
Sbjct: 32  TSGLSKMSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADN 91

Query: 320 NTDGLVDFSEFVA 332
           + DG +   EF  
Sbjct: 92  DGDGKIGADEFQE 104

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]} Length = 134

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

 Score = 61.3 bits (147), Expect = 4e-12
 Identities = 27/132 (20%), Positives = 53/132 (40%), Gaps = 6/132 (4%)

Query: 277 FDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH 336
           F  IDV+ +G++S EE++  ++K    K ++     +               +       
Sbjct: 6   FKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQ----LLQLIFKSIDADGNGEIDQNEFAKF 61

Query: 337 VHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG--SIDPLLEEADIDKD 394
              ++  D     +  +  ++  D+D DG +T EE+       G   +   + +AD + D
Sbjct: 62  YGSIQGQDLSDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKADANGD 121

Query: 395 GRISLSEFRRLL 406
           G I+L EF    
Sbjct: 122 GYITLEEFLEFS 133

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

 Score = 61.3 bits (148), Expect = 1e-11
 Identities = 23/95 (24%), Positives = 44/95 (46%), Gaps = 14/95 (14%)

Query: 274 RDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAA 333
              F   D+DK+GS+S  EMR A+ +   +KL   ++ +++ A   + + ++DF  FV  
Sbjct: 96  LTIFRKFDLDKSGSMSAYEMRMAI-EAAGFKLPC-QLHQVIVARFADDELIIDFDNFVRC 153

Query: 334 TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 368
            + +  L +             F++ D +  G I 
Sbjct: 154 LVRLEILFK------------IFKQLDPENTGTIQ 176

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]} Length = 188

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

 Score = 60.1 bits (145), Expect = 3e-11
 Identities = 27/156 (17%), Positives = 54/156 (34%), Gaps = 26/156 (16%)

Query: 264 TLDDEELAD-LRDQFDAIDVDKNGSISLEEMRQALAKDLPW-------KLKESRVLEILQ 315
            L +EE+ D  +  F  +    +  IS++E++  L + +                  ++ 
Sbjct: 12  VLSEEEIDDNFKTLFSKLA-GDDMEISVKELQTILNRIISKHKDLRTNGFSLESCRSMVN 70

Query: 316 AIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-- 373
            +D + +G +   EF      +                  F KFD+D+ G ++  E+R  
Sbjct: 71  LMDRDGNGKLGLVEFNILWNRIRNYLTI------------FRKFDLDKSGSMSAYEMRMA 118

Query: 374 ---MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLL 406
                  L   +  ++     D +  I    F R L
Sbjct: 119 IEAAGFKLPCQLHQVIVARFADDELIIDFDNFVRCL 154

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

 Score = 57.5 bits (139), Expect = 1e-11
 Identities = 14/61 (22%), Positives = 30/61 (49%)

Query: 272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFV 331
           ++   F   D + +G I  +E +  + K     L ++ V E ++  D + +G++D  EF+
Sbjct: 3   EILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFM 62

Query: 332 A 332
            
Sbjct: 63  D 63

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]} Length = 68

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

 Score = 52.9 bits (127), Expect = 6e-10
 Identities = 18/62 (29%), Positives = 30/62 (48%), Gaps = 7/62 (11%)

Query: 353 QAAFEKFDIDRDGFITPEELRMHTGLKGS-------IDPLLEEADIDKDGRISLSEFRRL 405
             AF+ FD + DG I  +E +      G        ++  ++EAD D +G I + EF  L
Sbjct: 5   LRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDL 64

Query: 406 LR 407
           ++
Sbjct: 65  IK 66

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 57.3 bits (138), Expect = 2e-11
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 1/68 (1%)

Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           L +E +A+ +  FD  D D  G IS +E+   +         +  +  I++ +D +  G 
Sbjct: 8   LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRML-GQNPTKEELDAIIEEVDEDGSGT 66

Query: 325 VDFSEFVA 332
           +DF EF+ 
Sbjct: 67  IDFEEFLV 74

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 47.3 bits (112), Expect = 7e-08
 Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 6/60 (10%)

Query: 353 QAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLL 406
           +AAF+ FD D  G I+ +EL     + G       +D ++EE D D  G I   EF  ++
Sbjct: 17  KAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMM 76

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

 Score = 57.2 bits (138), Expect = 2e-11
 Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 267 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVD 326
            +++AD    F   D + +G IS  E+  AL         E R   ++  ID + DG + 
Sbjct: 2   PQDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVR--RMMAEIDTDGDGFIS 59

Query: 327 FSEFVA 332
           F EF  
Sbjct: 60  FDEFTD 65

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

 Score = 49.2 bits (117), Expect = 1e-08
 Identities = 18/60 (30%), Positives = 28/60 (46%), Gaps = 5/60 (8%)

Query: 353 QAAFEKFDIDRDGFITPEELR-----MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 407
           +  F++FD + DG I+  EL      + +     +  ++ E D D DG IS  EF    R
Sbjct: 9   ERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDFAR 68

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

 Score = 57.7 bits (139), Expect = 3e-11
 Identities = 22/114 (19%), Positives = 35/114 (30%), Gaps = 19/114 (16%)

Query: 305 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRD 364
           L    + + + A         D  +F               +K     +  F   D D+ 
Sbjct: 6   LSAEDIKKAIGA--FTAADSFDHKKFFQMV--------GLKKKSADDVKKVFHILDKDKS 55

Query: 365 GFITPEELR---MHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRTA 409
           GFI  +EL                     L+   D D DG+I + EF  L+  +
Sbjct: 56  GFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAES 109

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]} Length = 109

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

 Score = 51.9 bits (124), Expect = 4e-09
 Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 2/73 (2%)

Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW--KLKESRVLEILQAIDC 319
              L  +   D++  F  +D DK+G I  +E+   L         L       ++ A D 
Sbjct: 32  MVGLKKKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDK 91

Query: 320 NTDGLVDFSEFVA 332
           + DG +   EF  
Sbjct: 92  DGDGKIGVEEFST 104

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} Length = 73

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

 Score = 56.1 bits (135), Expect = 5e-11
 Identities = 17/68 (25%), Positives = 39/68 (57%), Gaps = 1/68 (1%)

Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           L +E++A+ ++ F   D D +G+I+ +E+   +   L     E+ + +++  +D + +G 
Sbjct: 2   LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS-LGQNPTEAELQDMINEVDADGNGT 60

Query: 325 VDFSEFVA 332
           +DF EF+ 
Sbjct: 61  IDFPEFLT 68

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]} Length = 73

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

 Score = 42.7 bits (100), Expect = 2e-06
 Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 6/60 (10%)

Query: 353 QAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLL 406
           + AF  FD D DG IT +EL       G       +  ++ E D D +G I   EF  ++
Sbjct: 11  KEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMM 70

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 82

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

 Score = 56.1 bits (135), Expect = 6e-11
 Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 2/75 (2%)

Query: 259 RALASTLDDEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAI 317
           +A    L +E+  + +  FD   +  ++GSIS +E+ + + + L        + E++  +
Sbjct: 3   KAAVEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVM-RMLGQNPTPEELQEMIDEV 61

Query: 318 DCNTDGLVDFSEFVA 332
           D +  G VDF EF+ 
Sbjct: 62  DEDGSGTVDFDEFLV 76

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 82

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

 Score = 44.6 bits (105), Expect = 7e-07
 Identities = 16/61 (26%), Positives = 29/61 (47%), Gaps = 7/61 (11%)

Query: 353 QAAFEKFDID-RDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRL 405
           +AAF+ F +   DG I+ +EL     + G       +  +++E D D  G +   EF  +
Sbjct: 18  KAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVM 77

Query: 406 L 406
           +
Sbjct: 78  M 78

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

 Score = 56.0 bits (135), Expect = 7e-11
 Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 1/67 (1%)

Query: 266 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 325
           + +   ++   F   D D +G+I+++++R+   K+L   L E  + E++   D N D  +
Sbjct: 4   ERDSREEILKAFRLFDDDNSGTITIKDLRRVA-KELGENLTEEELQEMIAEADRNDDNEI 62

Query: 326 DFSEFVA 332
           D  EF+ 
Sbjct: 63  DEDEFIR 69

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]} Length = 77

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

 Score = 54.5 bits (131), Expect = 2e-10
 Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 9/76 (11%)

Query: 342 EHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDG 395
           E DS +       AF  FD D  G IT ++LR      G       +  ++ EAD + D 
Sbjct: 4   ERDSRE---EILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDN 60

Query: 396 RISLSEFRRLLRTASI 411
            I   EF R+++  S+
Sbjct: 61  EIDEDEFIRIMKKTSL 76

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.1 bits (140), Expect = 1e-10
 Identities = 22/144 (15%), Positives = 45/144 (31%), Gaps = 25/144 (17%)

Query: 273 LRDQFDAIDVDKNGSISLEEMRQALAK----DLPWKLKESRVLEILQAIDCNTDGLVDFS 328
           +   F A+   ++G +  EE+++ L +                 ++  +D +  G + F+
Sbjct: 2   VYTYFSAVA-GQDGEVDAEELQRCLTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFN 60

Query: 329 EFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEE 388
            F             +        +  F   D D  G +   ELR    +      L  +
Sbjct: 61  AFK------------ELWAALNAWKENFMTVDQDGSGTVEHHELRQ--AIGLMGYRLSPQ 106

Query: 389 ------ADIDKDGRISLSEFRRLL 406
                     K+GRI   ++    
Sbjct: 107 TLTTIVKRYSKNGRIFFDDYVACC 130

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.8 bits (134), Expect = 5e-10
 Identities = 19/93 (20%), Positives = 39/93 (41%), Gaps = 15/93 (16%)

Query: 276 QFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL 335
            F  +D D +G++   E+RQA+   + ++L    +  I++      +G + F ++VA  +
Sbjct: 75  NFMTVDQDGSGTVEHHELRQAI-GLMGYRLSPQTLTTIVKRYS--KNGRIFFDDYVACCV 131

Query: 336 HVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 368
            +  L +             F K D  + G   
Sbjct: 132 KLRALTD------------FFRKRDHLQQGSAN 152

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]} Length = 165

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (86), Expect = 0.001
 Identities = 15/92 (16%), Positives = 23/92 (25%), Gaps = 1/92 (1%)

Query: 320 NTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK 379
             DG VD  E     L    +    S       +      D D  G +     +      
Sbjct: 11  GQDGEVDAEELQRC-LTQSGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL 69

Query: 380 GSIDPLLEEADIDKDGRISLSEFRRLLRTASI 411
            +        D D  G +   E R+ +     
Sbjct: 70  NAWKENFMTVDQDGSGTVEHHELRQAIGLMGY 101

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]} Length = 172

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Sorcin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.4 bits (138), Expect = 2e-10
 Identities = 25/149 (16%), Positives = 53/149 (35%), Gaps = 21/149 (14%)

Query: 268 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW----KLKESRVLEILQAIDCNTDG 323
           +    L   F A+   ++G I  +E+++ L +                 ++  +D +  G
Sbjct: 4   QTQDPLYGYFAAVA-GQDGQIDADELQRCLTQSGIAGGYKPFNLETCRLMVSMLDRDMSG 62

Query: 324 LVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR--MHTGLKGS 381
            + F+EF      ++   +H            F  FD DR G + P+EL+  + T     
Sbjct: 63  TMGFNEFKELWAVLNGWRQH------------FISFDTDRSGTVDPQELQKALTTMGFRL 110

Query: 382 IDPLLEE--ADIDKDGRISLSEFRRLLRT 408
               +         +G+I+  ++      
Sbjct: 111 SPQAVNSIAKRYSTNGKITFDDYIACCVK 139

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

 Score = 59.3 bits (142), Expect = 2e-10
 Identities = 34/182 (18%), Positives = 61/182 (33%), Gaps = 24/182 (13%)

Query: 254 KQFALRALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEI 313
               LR     L +E+   LR  F +  V  +G  S ++++Q L       + E  + ++
Sbjct: 105 GYNRLRPSKPMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVL-AKYADTIPEGPLKKL 163

Query: 314 LQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS--------------------- 352
              ++ +T G + +   VA    +  L     +     +                     
Sbjct: 164 FVMVENDTKGRMSYITLVAVANDLAALVADFRKIDTNSNGTLSRKEFREHFVRLGFDKKS 223

Query: 353 --QAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRTAS 410
              A F   D D    +   E          +  L   AD DK G++S  E +++L  A 
Sbjct: 224 VQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFDKSGQLSKEEVQKVLEDAH 283

Query: 411 IS 412
           I 
Sbjct: 284 IP 285

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

 Score = 52.3 bits (124), Expect = 4e-08
 Identities = 14/78 (17%), Positives = 27/78 (34%), Gaps = 7/78 (8%)

Query: 336 HVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-------MHTGLKGSIDPLLEE 388
            V   E        L  +  +   D D+ G ++ EE++       +    +   +     
Sbjct: 239 DVGFSEYVHLGLCLLVLRILYAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSV 298

Query: 389 ADIDKDGRISLSEFRRLL 406
            D+D    +S  EF  L+
Sbjct: 299 VDVDDSKSLSYQEFVMLV 316

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]} Length = 321

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

 Score = 51.6 bits (122), Expect = 7e-08
 Identities = 12/56 (21%), Positives = 24/56 (42%)

Query: 277 FDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA 332
           +   D DK+G +S EE+++ L      +    +       +D +    + + EFV 
Sbjct: 259 YAFADFDKSGQLSKEEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVM 314

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

 Score = 54.2 bits (130), Expect = 3e-10
 Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 6/61 (9%)

Query: 353 QAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLL 406
              F  FD + DG+I  EEL++     G       I+ L+++ D + DGRI   EF   +
Sbjct: 18  SDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 77

Query: 407 R 407
           +
Sbjct: 78  K 78

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

 Score = 49.2 bits (117), Expect = 2e-08
 Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 3/67 (4%)

Query: 266 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 325
             EE  +L D F   D + +G I LEE++  L       + E  + E+++  D N DG +
Sbjct: 12  KTEE--ELSDLFRMFDKNADGYIDLEELKIMLQAT-GETITEDDIEELMKDGDKNNDGRI 68

Query: 326 DFSEFVA 332
           D+ EF+ 
Sbjct: 69  DYDEFLE 75

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]} Length = 81

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

 Score = 35.3 bits (81), Expect = 0.001
 Identities = 18/88 (20%), Positives = 33/88 (37%), Gaps = 8/88 (9%)

Query: 293 MRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS 352
           M + +  D   K +E  + ++ +  D N DG +D  E          L+           
Sbjct: 1   MVRCMKDDSKGKTEE-ELSDLFRMFDKNADGYIDLEELK------IMLQATGETITEDDI 53

Query: 353 QAAFEKFDIDRDGFITPEE-LRMHTGLK 379
           +   +  D + DG I  +E L    G++
Sbjct: 54  EELMKDGDKNNDGRIDYDEFLEFMKGVE 81

>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} Length = 186

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), M-type [TaxId: 10116]

 Score = 56.7 bits (136), Expect = 4e-10
 Identities = 26/156 (16%), Positives = 52/156 (33%), Gaps = 26/156 (16%)

Query: 264 TLDDEELAD-LRDQFDAIDVDKNGSISLEEMRQALAKDLPW-------KLKESRVLEILQ 315
             ++E++ D  R  F  +   ++  IS  E++  L + L                  ++ 
Sbjct: 10  EANEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRRVLAKREDIKSDGFSIETCKIMVD 68

Query: 316 AIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-- 373
            +D +  G +   EF            +       + Q  + + D+DR G +   E+R  
Sbjct: 69  MLDEDGSGKLGLKEF------------YILWTKIQKYQKIYREIDVDRSGTMNSYEMRKA 116

Query: 374 ---MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLL 406
                  L   +  ++     D +  I    F R L
Sbjct: 117 LEEAGFKLPCQLHQVIVARFADDELIIDFDNFVRCL 152

>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]} Length = 186

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), M-type [TaxId: 10116]

 Score = 51.7 bits (123), Expect = 2e-08
 Identities = 22/95 (23%), Positives = 48/95 (50%), Gaps = 14/95 (14%)

Query: 274 RDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAA 333
           +  +  IDVD++G+++  EMR+AL ++  +KL   ++ +++ A   + + ++DF  FV  
Sbjct: 94  QKIYREIDVDRSGTMNSYEMRKAL-EEAGFKLPC-QLHQVIVARFADDELIIDFDNFVRC 151

Query: 334 TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 368
            + +  L +             F++ D +  G I 
Sbjct: 152 LVRLEILFK------------IFKQLDPENTGTIQ 174

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 53.4 bits (128), Expect = 4e-10
 Identities = 13/63 (20%), Positives = 31/63 (49%), Gaps = 1/63 (1%)

Query: 271 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEF 330
           +  +  F+  D +K+G +SL+E R+           +  +++  + ID + +G ++  EF
Sbjct: 1   SSAKRVFEKFDKNKDGKLSLDEFREVA-LAFSPYFTQEDIVKFFEEIDVDGNGELNADEF 59

Query: 331 VAA 333
            + 
Sbjct: 60  TSC 62

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 51.1 bits (122), Expect = 3e-09
 Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 6/61 (9%)

Query: 353 QAAFEKFDIDRDGFITPEELR------MHTGLKGSIDPLLEEADIDKDGRISLSEFRRLL 406
           +  FEKFD ++DG ++ +E R           +  I    EE D+D +G ++  EF   +
Sbjct: 4   KRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCI 63

Query: 407 R 407
            
Sbjct: 64  E 64

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 67

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 36.8 bits (85), Expect = 3e-04
 Identities = 13/64 (20%), Positives = 21/64 (32%), Gaps = 6/64 (9%)

Query: 308 SRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFI 367
           S    + +  D N DG +   EF                         FE+ D+D +G +
Sbjct: 1   SSAKRVFEKFDKNKDGKLSLDEFREV------ALAFSPYFTQEDIVKFFEEIDVDGNGEL 54

Query: 368 TPEE 371
             +E
Sbjct: 55  NADE 58

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 142

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

 Score = 55.0 bits (131), Expect = 6e-10
 Identities = 23/149 (15%), Positives = 57/149 (38%), Gaps = 17/149 (11%)

Query: 265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGL 324
           L  +++ ++++ F  IDVD++G +S E+++    +       +        A+     G 
Sbjct: 1   LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKEL-----TAMLKEAPGP 55

Query: 325 VDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR------MHTGL 378
           ++F+ F          ++          + AF  FD      +  E ++           
Sbjct: 56  LNFTMF-----LSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFN 110

Query: 379 KGSIDPLLEEADIDKDGRISLSEFRRLLR 407
           K  +    +EA ++  G+    +F  +++
Sbjct: 111 KDEMRMTFKEAPVE-GGKFDYVKFTAMIK 138

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 146

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 55.1 bits (131), Expect = 7e-10
 Identities = 17/140 (12%), Positives = 42/140 (30%), Gaps = 6/140 (4%)

Query: 273 LRDQFDAIDVDKNGSISLEEMRQALAK--DLPWKLKESRVLEILQAIDCNTDGLVDFSEF 330
            +D F   D    G+I+ + +   L      P       ++    ++   +   +D    
Sbjct: 4   NKDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITG 63

Query: 331 VAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPE-ELRMHTGLKGS---IDPLL 386
           +             ++             +      +     +    G K +   +D LL
Sbjct: 64  LIEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELL 123

Query: 387 EEADIDKDGRISLSEFRRLL 406
           +  ++D +G I   +F   +
Sbjct: 124 KGVEVDSNGEIDYKKFIEDV 143

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 52.6 bits (126), Expect = 8e-10
 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 6/61 (9%)

Query: 353 QAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLL 406
              F  FD + DGFI  EEL       G       I+ L++++D + DGRI   EF +++
Sbjct: 12  ANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMM 71

Query: 407 R 407
            
Sbjct: 72  E 72

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 50.7 bits (121), Expect = 5e-09
 Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 3/67 (4%)

Query: 266 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 325
             EE  +L + F   D + +G I +EE+ +   +     + E  + ++++  D N DG +
Sbjct: 6   KSEE--ELANCFRIFDKNADGFIDIEELGEI-LRATGEHVIEEDIEDLMKDSDKNNDGRI 62

Query: 326 DFSEFVA 332
           DF EF+ 
Sbjct: 63  DFDEFLK 69

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]} Length = 75

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 34.9 bits (80), Expect = 0.002
 Identities = 16/74 (21%), Positives = 26/74 (35%), Gaps = 7/74 (9%)

Query: 307 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGF 366
           E  +    +  D N DG +D  E          L            +   +  D + DG 
Sbjct: 8   EEELANCFRIFDKNADGFIDIEELG------EILRATGEHVIEEDIEDLMKDSDKNNDGR 61

Query: 367 ITPEE-LRMHTGLK 379
           I  +E L+M  G++
Sbjct: 62  IDFDEFLKMMEGVQ 75

>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 170

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.0 bits (132), Expect = 1e-09
 Identities = 17/148 (11%), Positives = 33/148 (22%), Gaps = 30/148 (20%)

Query: 280 IDVDKNGSISLEEMRQALAKD-LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVH 338
           + ++  G I ++   Q    D    +   S         D           + +  + + 
Sbjct: 16  MQLNSEGKIPVKNFFQMFPADRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLC 75

Query: 339 QLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS----------------- 381
              E             F  +      ++T E L      K                   
Sbjct: 76  PRPE---------IDEIFTSYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQV 126

Query: 382 ---IDPLLEEADIDKDGRISLSEFRRLL 406
              ID         + G++S       L
Sbjct: 127 QGLIDKYEPSGINAQRGQLSPEGMVWFL 154

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} Length = 78

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 52.5 bits (126), Expect = 1e-09
 Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 2/73 (2%)

Query: 268 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVL-EILQAIDCNTDGLVD 326
            EL  + +++ A +      +S EE++Q +  + P  LK  R L ++ Q +D N DG V 
Sbjct: 7   AELKSIFEKYAAKE-GDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVS 65

Query: 327 FSEFVAATLHVHQ 339
           F EF      + Q
Sbjct: 66  FEEFQVLVKKISQ 78

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]} Length = 78

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 41.0 bits (96), Expect = 1e-05
 Identities = 16/65 (24%), Positives = 31/65 (47%), Gaps = 10/65 (15%)

Query: 353 QAAFEKFDI--DRDGFITPEELR--MHTGLKG------SIDPLLEEADIDKDGRISLSEF 402
           ++ FEK+         ++ EEL+  +            ++D L +E D + DG +S  EF
Sbjct: 10  KSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEF 69

Query: 403 RRLLR 407
           + L++
Sbjct: 70  QVLVK 74

>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} Length = 173

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain small (regulatory) subunit (domain VI)
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 54.2 bits (129), Expect = 3e-09
 Identities = 29/151 (19%), Positives = 50/151 (33%), Gaps = 25/151 (16%)

Query: 268 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW-------KLKESRVLEILQAIDCN 320
           EE+   R  F  +    +  +S  E+   L K +                  ++  +D +
Sbjct: 1   EEVRQFRRLFAQLA-GDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSD 59

Query: 321 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR-----MH 375
           T G + F EF                    + QA +++FD+DR G I   EL        
Sbjct: 60  TTGKLGFEEF------------KYLWNNIKKWQAIYKQFDVDRSGTIGSSELPGAFEAAG 107

Query: 376 TGLKGSIDPLLEEADIDKDGRISLSEFRRLL 406
             L   +  ++     D+ G +    F   L
Sbjct: 108 FHLNEHLYSMIIRRYSDEGGNMDFDNFISCL 138

>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]} Length = 173

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain small (regulatory) subunit (domain VI)
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 49.9 bits (118), Expect = 6e-08
 Identities = 20/95 (21%), Positives = 37/95 (38%), Gaps = 14/95 (14%)

Query: 274 RDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAA 333
           +  +   DVD++G+I   E+  A  +   + L E     I++       G +DF  F++ 
Sbjct: 80  QAIYKQFDVDRSGTIGSSELPGAF-EAAGFHLNEHLYSMIIRRYSDE-GGNMDFDNFISC 137

Query: 334 TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFIT 368
            + +  +              AF+  D D  G I 
Sbjct: 138 LVRLDAMFR------------AFKSLDKDGTGQIQ 160

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]} Length = 152

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

 Score = 53.1 bits (126), Expect = 4e-09
 Identities = 23/151 (15%), Positives = 55/151 (36%), Gaps = 10/151 (6%)

Query: 265 LDDEELADLRDQFDAIDVDKN--GSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTD 322
           L  +E+ DL+D F+  D      G++   ++     + L    +   V  +        +
Sbjct: 1   LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVC-RCLGINPRNEDVFAV-GGTHKMGE 58

Query: 323 GLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS- 381
             + F EF+ A   +   E+     +    +  F++             +    G + S 
Sbjct: 59  KSLPFEEFLPAYEGLMDCEQGTFADYMEAFK-TFDREGQGFISGAELRHVLTALGERLSD 117

Query: 382 --IDPLLEEADI--DKDGRISLSEFRRLLRT 408
             +D +++  D+  D +G +   +F + +  
Sbjct: 118 EDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA 148

>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} Length = 99

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Nucleobindin 1 (CALNUC)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.8 bits (121), Expect = 7e-09
 Identities = 15/83 (18%), Positives = 31/83 (37%), Gaps = 15/83 (18%)

Query: 267 DEELADLRDQFDAIDVDKNGSISLEEMRQALAK---------------DLPWKLKESRVL 311
           D    + +  F   D++ +G +  +E+     K                   + +     
Sbjct: 12  DPNRFNPKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMRE 71

Query: 312 EILQAIDCNTDGLVDFSEFVAAT 334
            +++ +D N D LV   EF+A+T
Sbjct: 72  HVMKNVDTNQDRLVTLEEFLAST 94

>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]} Length = 99

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Nucleobindin 1 (CALNUC)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.1 bits (114), Expect = 6e-08
 Identities = 15/92 (16%), Positives = 33/92 (35%), Gaps = 24/92 (26%)

Query: 338 HQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR----------------------MH 375
            +L+  D  +++ +    F   DI+ DG +  +EL                       M 
Sbjct: 6   EELDGLDPNRFNPK--TFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREME 63

Query: 376 TGLKGSIDPLLEEADIDKDGRISLSEFRRLLR 407
                  + +++  D ++D  ++L EF    +
Sbjct: 64  EERLRMREHVMKNVDTNQDRLVTLEEFLASTQ 95

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} Length = 92

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]

 Score = 50.3 bits (120), Expect = 9e-09
 Identities = 16/70 (22%), Positives = 31/70 (44%), Gaps = 5/70 (7%)

Query: 267 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW----KLKESRVLEILQAIDCNTD 322
           +  +  +   F     DK G ++ E++R  + K+ P     +     V +I++ +D   D
Sbjct: 5   EHAMETMMFTFHKFAGDK-GYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRD 63

Query: 323 GLVDFSEFVA 332
           G V F  F +
Sbjct: 64  GKVGFQSFFS 73

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]} Length = 92

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]

 Score = 38.4 bits (89), Expect = 1e-04
 Identities = 15/64 (23%), Positives = 29/64 (45%), Gaps = 12/64 (18%)

Query: 354 AAFEKFDIDRDGFITPEELR-----------MHTGLKGSIDPLLEEADIDKDGRISLSEF 402
             F KF  D  G++T E+LR            +     ++D ++++ D  +DG++    F
Sbjct: 13  FTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSF 71

Query: 403 RRLL 406
             L+
Sbjct: 72  FSLI 75

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 140

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Cdc4p
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 51.2 bits (121), Expect = 1e-08
 Identities = 23/142 (16%), Positives = 49/142 (34%), Gaps = 9/142 (6%)

Query: 268 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDF 327
            + +  +  F   D    G I    +      DL     ++  L  +  I+      VD 
Sbjct: 2   TDDSPYKQAFSLFDRHGTGRIPKTSI-----GDLLRACGQNPTLAEITEIESTLPAEVDM 56

Query: 328 SEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS---IDP 384
            +F+      +  +     +  ++    F+K      G      +    G K S   +D 
Sbjct: 57  EQFLQVLNRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDE 116

Query: 385 LLEEADIDKDGRISLSEFRRLL 406
           LL+   +  DG ++  +F +++
Sbjct: 117 LLKGVPVK-DGMVNYHDFVQMI 137

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 181

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Apoptosis-linked protein alg-2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 52.0 bits (123), Expect = 1e-08
 Identities = 29/164 (17%), Positives = 49/164 (29%), Gaps = 24/164 (14%)

Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNT 321
           A+     + + L + F  +D D++G IS  E++QAL+           V  I+   D   
Sbjct: 10  AAGAALPDQSFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDREN 69

Query: 322 DGLVD------------------------FSEFVAATLHVHQLEEHDSEKWHLRSQAAFE 357
              V+                         S  +        L                 
Sbjct: 70  KAGVNFSEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIR 129

Query: 358 KFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSE 401
           KFD    G I  ++      +   +  +    D D+DG I +S 
Sbjct: 130 KFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSY 173

>d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} Length = 87

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]

 Score = 49.4 bits (118), Expect = 2e-08
 Identities = 14/67 (20%), Positives = 31/67 (46%), Gaps = 2/67 (2%)

Query: 268 EELADLRDQFDA-IDVDKNGSI-SLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLV 325
           + L  + D +     +  N      +++++ L  + P  +++       + +D NTDG V
Sbjct: 7   KALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAV 66

Query: 326 DFSEFVA 332
           +F EF+ 
Sbjct: 67  NFQEFLI 73

>d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]} Length = 87

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]

 Score = 35.6 bits (82), Expect = 0.001
 Identities = 13/62 (20%), Positives = 24/62 (38%), Gaps = 9/62 (14%)

Query: 354 AAFEKF-DIDRDGFI-TPEELR-------MHTGLKGSIDPLLEEADIDKDGRISLSEFRR 404
             + K+  I  +      ++L+            K   D   +E DI+ DG ++  EF  
Sbjct: 14  DVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLI 73

Query: 405 LL 406
           L+
Sbjct: 74  LV 75

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 65

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 47.7 bits (113), Expect = 3e-08
 Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 1/61 (1%)

Query: 272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFV 331
           ++R+ F   D D NG IS  E+R     +L  KL +  V E+++  D + DG V++ EFV
Sbjct: 4   EIREAFRVFDKDGNGYISAAELRHV-MTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 62

Query: 332 A 332
            
Sbjct: 63  Q 63

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 65

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 45.0 bits (106), Expect = 3e-07
 Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 6/60 (10%)

Query: 353 QAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLL 406
           + AF  FD D +G+I+  ELR      G       +D ++ EADID DG+++  EF +++
Sbjct: 6   REAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 65

>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} Length = 100

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]

 Score = 48.8 bits (116), Expect = 4e-08
 Identities = 14/76 (18%), Positives = 32/76 (42%), Gaps = 7/76 (9%)

Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW------KLKESRVLEILQ 315
           ++T  +  +  + D F      ++  I    +   + ++ P       K   + + ++ +
Sbjct: 1   SNTQAERSIIGMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFE 59

Query: 316 AIDCNTDGLVDFSEFV 331
             D N D  +DFSEF+
Sbjct: 60  KKDKNEDKKIDFSEFL 75

>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]} Length = 100

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]

 Score = 35.7 bits (82), Expect = 0.001
 Identities = 18/86 (20%), Positives = 27/86 (31%), Gaps = 18/86 (20%)

Query: 356 FEKFDIDRDGFITPEELR-------------MHTGLKGSIDPLLEEADIDKDGRISLSEF 402
           F K+   RD  I    L                      +  + E+ D ++D +I  SEF
Sbjct: 16  FHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEF 74

Query: 403 RRLLRTASI----SSRNVPPSPSGHR 424
             LL   +      S    P   G +
Sbjct: 75  LSLLGDIATDYHKQSHGAAPCSGGSQ 100

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 61

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 47.3 bits (112), Expect = 5e-08
 Identities = 16/60 (26%), Positives = 34/60 (56%), Gaps = 1/60 (1%)

Query: 272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFV 331
           D    F   D +  G +S+ ++R  L   L  KL ++ V E+L+ ++ +++G +D+ +F+
Sbjct: 2   DFVKAFQVFDKESTGKVSVGDLRYML-TGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFI 60

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]} Length = 61

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 41.9 bits (98), Expect = 4e-06
 Identities = 14/56 (25%), Positives = 26/56 (46%), Gaps = 6/56 (10%)

Query: 353 QAAFEKFDIDRDGFITPE---ELRMHTGLKGS---IDPLLEEADIDKDGRISLSEF 402
             AF+ FD +  G ++      +    G K +   +D LL+  ++D +G I   +F
Sbjct: 4   VKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKF 59

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]} Length = 191

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

 Score = 49.8 bits (118), Expect = 9e-08
 Identities = 17/84 (20%), Positives = 32/84 (38%), Gaps = 5/84 (5%)

Query: 71  VVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVG 130
           V+  +L   A+ +  G+VH D+   N L      +  +   DF  S  +   + +++I+ 
Sbjct: 108 VLDMILEEVAKFYHRGIVHGDLSQYNVLV----SEEGIWIIDFPQSVEVGE-EGWREILE 162

Query: 131 SAYYVAPEVLKRKSGPESDVWSIG 154
                      R    E D+ S  
Sbjct: 163 RDVRNIITYFSRTYRTEKDINSAI 186

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} Length = 93

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

 Score = 46.4 bits (110), Expect = 2e-07
 Identities = 18/78 (23%), Positives = 35/78 (44%), Gaps = 9/78 (11%)

Query: 262 ASTLDDEELADLRDQFDAIDVDKNG---SISLEEMRQALAKDLPW----KLKESRVLEIL 314
           A  L+ + L  +   F      K G    ++  E+++ L ++LP     +  E+   +++
Sbjct: 1   ACPLE-KALDVMVSTFHKYS-GKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLM 58

Query: 315 QAIDCNTDGLVDFSEFVA 332
             +D N D  VDF E+  
Sbjct: 59  SNLDSNRDNEVDFQEYCV 76

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]} Length = 93

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

 Score = 38.7 bits (90), Expect = 1e-04
 Identities = 10/72 (13%), Positives = 25/72 (34%), Gaps = 15/72 (20%)

Query: 354 AAFEKFDIDRDG---FITPEELR-----------MHTGLKGSIDPLLEEADIDKDGRISL 399
           + F K+   ++G    +   EL+                + +   L+   D ++D  +  
Sbjct: 13  STFHKYS-GKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDF 71

Query: 400 SEFRRLLRTASI 411
            E+   L   ++
Sbjct: 72  QEYCVFLSCIAM 83

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} Length = 76

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 45.7 bits (108), Expect = 3e-07
 Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 2/67 (2%)

Query: 267 DEELADLRDQFDAIDVDKNGSISLEEMRQALAK-DLPWKLKESRVLEILQAIDCNTDGLV 325
            EE+    + F A + D    IS EE++  +           S + E+++ +D N DG V
Sbjct: 4   PEEIKGAFEVFAAKEGD-PNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEV 62

Query: 326 DFSEFVA 332
            F EF+ 
Sbjct: 63  SFEEFLV 69

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]} Length = 76

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 40.7 bits (95), Expect = 2e-05
 Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 10/68 (14%)

Query: 353 QAAFEKFDID--RDGFITPEELR--------MHTGLKGSIDPLLEEADIDKDGRISLSEF 402
           + AFE F         I+ EEL+               ++D ++EE D + DG +S  EF
Sbjct: 8   KGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEF 67

Query: 403 RRLLRTAS 410
             +++  S
Sbjct: 68  LVMMKKIS 75

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} Length = 98

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

 Score = 45.6 bits (108), Expect = 5e-07
 Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 3/68 (4%)

Query: 268 EELADLRDQFD--AIDVDKNGSISLEEMRQALAKDLPWKLKESRVL-EILQAIDCNTDGL 324
           E +  +   F   A    +  S+S+ E ++ + + LP  LK+   L E ++++D N D  
Sbjct: 11  ESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSE 70

Query: 325 VDFSEFVA 332
           + F+E+  
Sbjct: 71  LKFNEYWR 78

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]} Length = 98

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

 Score = 36.0 bits (83), Expect = 0.001
 Identities = 12/64 (18%), Positives = 27/64 (42%), Gaps = 12/64 (18%)

Query: 354 AAFEKFDIDRDG---FITPEELR--------MHTGLKGSIDPLLEEADIDKDGRISLSEF 402
             F  F   ++G    ++  E +              GS+D  ++  D+++D  +  +E+
Sbjct: 18  TTFFTFA-RQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEY 76

Query: 403 RRLL 406
            RL+
Sbjct: 77  WRLI 80

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]} Length = 182

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

 Score = 47.3 bits (111), Expect = 6e-07
 Identities = 23/162 (14%), Positives = 50/162 (30%), Gaps = 25/162 (15%)

Query: 262 ASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAK-------DLPWKLKESRVLEIL 314
           A  ++D +  +L + F A+D D +G+IS+ E+  AL+            KL         
Sbjct: 11  ARHMNDNQ--ELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHS 68

Query: 315 QAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFD-------------- 360
             I  +    +             +    D        +AA                   
Sbjct: 69  GEITFDEFKDLHHFILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRK 128

Query: 361 --IDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLS 400
               R G +  ++    +     +  +    D ++ G+++ +
Sbjct: 129 FDRQRRGSLGFDDYVELSIFVCRVRNVFAFYDRERTGQVTFT 170

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} Length = 93

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a3 [TaxId: 9606]

 Score = 44.4 bits (105), Expect = 1e-06
 Identities = 16/73 (21%), Positives = 32/73 (43%), Gaps = 8/73 (10%)

Query: 267 DEELADLRDQFDAIDVDKNG---SISLEEMRQALAKDLP----WKLKESRVLEILQAIDC 319
           ++ +A +   F      + G    +   E+++ L K+L      + +E    + +  +D 
Sbjct: 5   EQAVAAIVCTFQEYA-GRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDT 63

Query: 320 NTDGLVDFSEFVA 332
           N D  VDF E+V 
Sbjct: 64  NKDCEVDFVEYVR 76

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]} Length = 93

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a3 [TaxId: 9606]

 Score = 35.2 bits (81), Expect = 0.002
 Identities = 10/66 (15%), Positives = 22/66 (33%), Gaps = 13/66 (19%)

Query: 354 AAFEKF-DIDRDGF-ITPEELR-----------MHTGLKGSIDPLLEEADIDKDGRISLS 400
             F+++     D + +   EL+                +   +  +   D +KD  +   
Sbjct: 13  CTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFV 72

Query: 401 EFRRLL 406
           E+ R L
Sbjct: 73  EYVRSL 78

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} Length = 93

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

 Score = 44.2 bits (104), Expect = 1e-06
 Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 7/77 (9%)

Query: 262 ASTLDD--EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP----WKLKESRVLEILQ 315
            S L+   E L ++       + DK   +S +E++  L  +L      +     V +I++
Sbjct: 1   GSELETAMETLINVFHAHSGKEGDK-YKLSKKELKDLLQTELSSFLDVQKDADAVDKIMK 59

Query: 316 AIDCNTDGLVDFSEFVA 332
            +D N DG VDF EFV 
Sbjct: 60  ELDENGDGEVDFQEFVV 76

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]} Length = 93

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

 Score = 37.2 bits (86), Expect = 4e-04
 Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 15/67 (22%)

Query: 354 AAFEKFDIDRDG---FITPEELRMHTGLKGS-----------IDPLLEEADIDKDGRISL 399
             F      ++G    ++ +EL+     + S           +D +++E D + DG +  
Sbjct: 13  NVFHAHS-GKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDF 71

Query: 400 SEFRRLL 406
            EF  L+
Sbjct: 72  QEFVVLV 78

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} Length = 83

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.0 bits (103), Expect = 1e-06
 Identities = 12/62 (19%), Positives = 26/62 (41%), Gaps = 1/62 (1%)

Query: 272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFV 331
            +  +F+  D  K  +IS EE R    +     L + +   +   +  N  G + + +F+
Sbjct: 21  AITQEFENFDTMKTNTISREEFRAICNR-RVQILTDEQFDRLWNEMPVNAKGRLKYPDFL 79

Query: 332 AA 333
           + 
Sbjct: 80  SR 81

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]} Length = 83

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.9 bits (82), Expect = 0.001
 Identities = 13/74 (17%), Positives = 25/74 (33%), Gaps = 7/74 (9%)

Query: 339 QLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELR---MHTGLKGSIDPLLEEA---DID 392
           +L +  +  +H      FE FD  +   I+ EE R          + +          ++
Sbjct: 10  RLHKAVTSHYH-AITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVN 68

Query: 393 KDGRISLSEFRRLL 406
             GR+   +F    
Sbjct: 69  AKGRLKYPDFLSRF 82

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.3 bits (94), Expect = 3e-05
 Identities = 17/70 (24%), Positives = 32/70 (45%), Gaps = 4/70 (5%)

Query: 264 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 323
            +  E+ A     FD++    NG +S ++++  L      KL    +  + +  D + DG
Sbjct: 3   AVKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLN---SKLPVDILGRVWELSDIDHDG 58

Query: 324 LVDFSEFVAA 333
           ++D  EF  A
Sbjct: 59  MLDRDEFAVA 68

>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]} Length = 87

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]

 Score = 40.1 bits (94), Expect = 3e-05
 Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 6/71 (8%)

Query: 267 DEELADLRDQFD--AIDVDKNGSISLEEMRQALAKDLP----WKLKESRVLEILQAIDCN 320
           +E L  + + F   ++      ++S  E++Q L K+L         ++ + EI Q +D N
Sbjct: 4   EEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDAN 63

Query: 321 TDGLVDFSEFV 331
            D  VDF EF+
Sbjct: 64  QDEQVDFQEFI 74

>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} Length = 89

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a6 [TaxId: 9606]

 Score = 40.2 bits (94), Expect = 3e-05
 Identities = 15/70 (21%), Positives = 38/70 (54%), Gaps = 4/70 (5%)

Query: 267 DEELADLRDQFDA-IDVDKNG-SISLEEMRQALAKD--LPWKLKESRVLEILQAIDCNTD 322
           D+ +  L   F      + +  ++S +E+++ + K+  +  KL+++ +  +++ +D N D
Sbjct: 5   DQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKD 64

Query: 323 GLVDFSEFVA 332
             V+F E+V 
Sbjct: 65  QEVNFQEYVT 74

>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]} Length = 89

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a6 [TaxId: 9606]

 Score = 34.1 bits (78), Expect = 0.004
 Identities = 14/64 (21%), Positives = 26/64 (40%), Gaps = 11/64 (17%)

Query: 354 AAFEKF-DIDRDGF-ITPEELR---------MHTGLKGSIDPLLEEADIDKDGRISLSEF 402
           A F K+   + D   ++ +EL+                 I  L+E+ D +KD  ++  E+
Sbjct: 13  AIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEY 72

Query: 403 RRLL 406
              L
Sbjct: 73  VTFL 76

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (91), Expect = 7e-05
 Identities = 17/76 (22%), Positives = 28/76 (36%), Gaps = 3/76 (3%)

Query: 264 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 323
            +   E A   + F   D D +G +S  E+R+     L   L  + +  I    D    G
Sbjct: 3   VVSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIF---LKTGLPSTLLAHIWSLCDTKDCG 59

Query: 324 LVDFSEFVAATLHVHQ 339
            +   +F  A   + Q
Sbjct: 60  KLSKDQFALAFHLISQ 75

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]} Length = 95

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (86), Expect = 4e-04
 Identities = 19/74 (25%), Positives = 27/74 (36%), Gaps = 7/74 (9%)

Query: 353 QAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLE----EADIDKDGRISLSEF---RRL 405
              F K D D DGF++  E+R      G    LL       D    G++S  +F     L
Sbjct: 13  DEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWSLCDTKDCGKLSKDQFALAFHL 72

Query: 406 LRTASISSRNVPPS 419
           +    I   + P  
Sbjct: 73  ISQKLIKGIDPPHV 86

>d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]} Length = 95

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]

 Score = 39.3 bits (92), Expect = 7e-05
 Identities = 14/68 (20%), Positives = 30/68 (44%), Gaps = 5/68 (7%)

Query: 268 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDG 323
           E L  +  +    D +    IS  E    +  +L    +  +    +  +++ +D ++DG
Sbjct: 9   ESLIAIFQKHAGRDGNNT-KISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDG 67

Query: 324 LVDFSEFV 331
            +DF EF+
Sbjct: 68  QLDFQEFL 75

>d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]} Length = 90

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Cow (Bos taurus), s100b [TaxId: 9913]

 Score = 38.9 bits (91), Expect = 8e-05
 Identities = 17/68 (25%), Positives = 36/68 (52%), Gaps = 5/68 (7%)

Query: 268 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDG 323
             L D+  Q+   + DK+  +   E+++ +  +L   L+E +    V ++++ +D + DG
Sbjct: 9   VALIDVFHQYSGREGDKH-KLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDG 67

Query: 324 LVDFSEFV 331
             DF EF+
Sbjct: 68  ECDFQEFM 75

>d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]} Length = 94

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100p [TaxId: 9606]

 Score = 37.8 bits (88), Expect = 3e-04
 Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 4/57 (7%)

Query: 279 AIDVDKNGSISLEEMRQALAKDLPWKLKESR----VLEILQAIDCNTDGLVDFSEFV 331
           +       +++  E++  + K+LP  L+  +    V ++L+ +D N D  VDFSEF+
Sbjct: 19  SGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFI 75

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 92

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.3 bits (86), Expect = 3e-04
 Identities = 20/70 (28%), Positives = 29/70 (41%), Gaps = 3/70 (4%)

Query: 264 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDG 323
            + DE+     +QF  I  D NG I     ++   K    KL    +  I +  D + DG
Sbjct: 2   KITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTK---SKLPILELSHIWELSDFDKDG 58

Query: 324 LVDFSEFVAA 333
            +   EF AA
Sbjct: 59  ALTLDEFCAA 68

>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]} Length = 99

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.7 bits (87), Expect = 3e-04
 Identities = 15/73 (20%), Positives = 27/73 (36%), Gaps = 4/73 (5%)

Query: 353 QAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEE----ADIDKDGRISLSEFRRLLRT 408
           +  + + +    G +   +        G  D +L +    AD D  G +S  EF   LR 
Sbjct: 14  EKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILGKIWDLADTDGKGVLSKQEFFVALRL 73

Query: 409 ASISSRNVPPSPS 421
            + +   +  S S
Sbjct: 74  VACAQNGLEVSLS 86

>d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]} Length = 151

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Osteonectin
domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (89), Expect = 4e-04
 Identities = 18/76 (23%), Positives = 29/76 (38%), Gaps = 9/76 (11%)

Query: 336 HVHQLEEHDSEKWHLRSQAA----FEKFDIDR-DGFITPEEL----RMHTGLKGSIDPLL 386
           H  +L   D EK +          F + D    DG+++  EL         ++       
Sbjct: 59  HPVELLARDFEKNYNMYIFPVHWQFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFF 118

Query: 387 EEADIDKDGRISLSEF 402
           E  D+D D  I+L E+
Sbjct: 119 ETCDLDNDKYIALDEW 134

>d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]} Length = 83

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]

 Score = 35.0 bits (81), Expect = 0.001
 Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 5/54 (9%)

Query: 283 DKNGSISLEEMRQALAKDLPWKLK-----ESRVLEILQAIDCNTDGLVDFSEFV 331
               +++  E ++ + KDL   LK     E  +  I++ +D N D  + F EF+
Sbjct: 24  GHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFI 77

>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]} Length = 33

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

 Score = 33.0 bits (76), Expect = 0.003
 Identities = 10/19 (52%), Positives = 13/19 (68%)

Query: 355 AFEKFDIDRDGFITPEELR 373
           AF  FD D +G+I+  ELR
Sbjct: 8   AFRVFDKDGNGYISAAELR 26

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	429
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	100.0
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	100.0
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	100.0
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	100.0
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	100.0
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	100.0
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	100.0
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	100.0
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	100.0
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.97
d1exra_	146	Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI	99.87
d1wdcb_	142	Myosin Essential Chain {Bay scallop (Aequipecten i	99.87
d1topa_	162	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.87
d1dtla_	156	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.86
d1lkja_	146	Calmodulin {Baker's yeast (Saccharomyces cerevisia	99.86
d1jfja_	134	EHCABP {Entamoeba (Entamoeba histolytica) [TaxId:	99.86
d2obha1	141	Calmodulin {Human (Homo sapiens) [TaxId: 9606]}	99.85
d2mysc_	145	Myosin Regulatory Chain {Chicken (Gallus gallus) [	99.84
d1wdcc_	152	Myosin Regulatory Chain {Bay scallop (Aequipecten	99.84
d1ggwa_	140	Cdc4p {Fission yeast (Schizosaccharomyces pombe) [	99.84
d1s6ia_	182	Calcium-dependent protein kinase sk5 CLD {Soybean	99.84
d1m45a_	146	Myosin Light Chain Mlc1p {Baker's yeast (Saccharom	99.83
d1auib_	165	Calcineurin regulatory subunit (B-chain) {Human (H	99.83
d2mysb_	145	Myosin Essential Chain {Chicken (Gallus gallus) [T	99.82
d1y1xa_	182	Programmed cell death 6 protein-like protein {Leis	99.81
d1jbaa_	189	Guanylate cyclase activating protein 2, GCAP-2 {Co	99.79
d1qv0a_	189	Calcium-regulated photoprotein {Hydrozoa (Obelia l	99.79
d1bjfa_	181	Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}	99.78
d1hqva_	181	Apoptosis-linked protein alg-2 {Mouse (Mus musculu	99.78
d1omra_	201	Recoverin {Cow (Bos taurus) [TaxId: 9913]}	99.77
d1w7jb1	139	Myosin Essential Chain {Human (Homo sapiens) [TaxI	99.77
d1g8ia_	187	Frequenin (neuronal calcium sensor 1) {Human (Homo	99.77
d2zfda1	183	Calcineurin B-like protein 2 {Thale cress (Arabido	99.77
d1fpwa_	190	Frequenin (neuronal calcium sensor 1) {Baker's yea	99.76
d2sasa_	185	Sarcoplasmic calcium-binding protein {Amphioxus (B	99.75
d1uhka1	187	Calcium-regulated photoprotein {Jellyfish (Aequore	99.74
d1s6ca_	178	Kchip1, Kv4 potassium channel-interacting protein	99.73
d1qxpa2	188	Calpain large subunit, C-terminal domain (domain I	99.73
d2scpa_	174	Sarcoplasmic calcium-binding protein {Sandworm (Ne	99.73
d1k94a_	165	Grancalcin {Human (Homo sapiens) [TaxId: 9606]}	99.72
d1df0a1	186	Calpain large subunit, C-terminal domain (domain I	99.71
d1ij5a_	321	Cbp40 (plasmodial specific CaII-binding protein LA	99.7
d1alva_	173	Calpain small (regulatory) subunit (domain VI) {Pi	99.7
d1xo5a_	180	Calcium- and integrin-binding protein, CIB {Human	99.69
d1pvaa_	109	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	99.68
d1juoa_	172	Sorcin {Human (Homo sapiens) [TaxId: 9606]}	99.68
d1nyaa_	176	Calerythrin {Saccharopolyspora erythraea [TaxId: 1	99.66
d5pala_	109	Parvalbumin {Leopard shark (Triakis semifasciata)	99.66
d2pvba_	107	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	99.61
d1rwya_	109	Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}	99.58
d1rroa_	108	Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116	99.54
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.53
d1wrka1	82	Troponin C {Human (Homo sapiens), cardiac isoform	99.46
d2opoa1	81	Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta	99.45
d1f54a_	77	Calmodulin {Baker's yeast (Saccharomyces cerevisia	99.45
d1avsa_	81	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.45
d2pq3a1	73	Calmodulin {Rattus norvegicus [TaxId: 10116]}	99.45
d1s6ja_	87	Calcium-dependent protein kinase sk5 CLD {Soybean	99.43
d2zkmx1	170	Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI	99.43
d1k94a_	165	Grancalcin {Human (Homo sapiens) [TaxId: 9606]}	99.42
d1df0a1	186	Calpain large subunit, C-terminal domain (domain I	99.42
d1alva_	173	Calpain small (regulatory) subunit (domain VI) {Pi	99.41
d1hqva_	181	Apoptosis-linked protein alg-2 {Mouse (Mus musculu	99.4
d1y1xa_	182	Programmed cell death 6 protein-like protein {Leis	99.37
d1fw4a_	65	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	99.35
d1jc2a_	75	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.35
d1juoa_	172	Sorcin {Human (Homo sapiens) [TaxId: 9606]}	99.35
d1c7va_	68	Calcium vector protein {Amphioxus (Branchiostoma l	99.34
d1jc2a_	75	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.34
d1fi5a_	81	Troponin C {Chicken (Gallus gallus), cardiac isofo	99.33
d1fw4a_	65	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	99.32
d1fpwa_	190	Frequenin (neuronal calcium sensor 1) {Baker's yea	99.32
d2fcea1	61	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	99.3
d1oqpa_	77	Caltractin (centrin 2) {Green algae (Chlamydomonas	99.29
d1fi5a_	81	Troponin C {Chicken (Gallus gallus), cardiac isofo	99.29
d1tiza_	67	Calmodulin-related protein T21P5.17 {Thale cress (	99.29
d1qxpa2	188	Calpain large subunit, C-terminal domain (domain I	99.28
d1avsa_	81	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	99.27
d1oqpa_	77	Caltractin (centrin 2) {Green algae (Chlamydomonas	99.27
d2opoa1	81	Polcalcin Che a 3 {Pigweed (Chenopodium album) [Ta	99.27
d1tiza_	67	Calmodulin-related protein T21P5.17 {Thale cress (	99.26
d1c7va_	68	Calcium vector protein {Amphioxus (Branchiostoma l	99.26
d1wrka1	82	Troponin C {Human (Homo sapiens), cardiac isoform	99.25
d2fcea1	61	Calmodulin {Cow (Bos taurus) [TaxId: 9913]}	99.24
d1f54a_	77	Calmodulin {Baker's yeast (Saccharomyces cerevisia	99.22
d2pq3a1	73	Calmodulin {Rattus norvegicus [TaxId: 10116]}	99.22
d1jbaa_	189	Guanylate cyclase activating protein 2, GCAP-2 {Co	99.19
d1s6ja_	87	Calcium-dependent protein kinase sk5 CLD {Soybean	99.19
d1qx2a_	76	Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}	99.18
d1jfja_	134	EHCABP {Entamoeba (Entamoeba histolytica) [TaxId:	99.16
d1pvaa_	109	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	99.13
d1s6ca_	178	Kchip1, Kv4 potassium channel-interacting protein	99.13
d1omra_	201	Recoverin {Cow (Bos taurus) [TaxId: 9913]}	99.11
d1xo5a_	180	Calcium- and integrin-binding protein, CIB {Human	99.1
d1wlza1	83	DJ-1-binding protein, DJBP {Human (Homo sapiens) [	99.09
d1g8ia_	187	Frequenin (neuronal calcium sensor 1) {Human (Homo	99.09
d5pala_	109	Parvalbumin {Leopard shark (Triakis semifasciata)	99.08
d1fi6a_	92	Reps1 {Mouse (Mus musculus) [TaxId: 10090]}	99.08
d1c07a_	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	99.08
d2zfda1	183	Calcineurin B-like protein 2 {Thale cress (Arabido	99.07
d1rroa_	108	Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116	99.06
d2pvba_	107	Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}	99.04
d1bjfa_	181	Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}	99.03
d1snla_	99	Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax	99.03
d1qx2a_	76	Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}	99.01
d1exra_	146	Calmodulin {Ciliate (Paramecium tetraurelia) [TaxI	99.0
d1a4pa_	92	Calcyclin (S100) {Human (Homo sapiens), P11 s100a1	99.0
d1yuta1	98	Calcyclin (S100) {Human (Homo sapiens), s100a13 [T	99.0
d1rwya_	109	Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}	98.99
d1zfsa1	93	Calcyclin (S100) {Rat (Rattus norvegicus), s100a1	98.98
d1zfsa1	93	Calcyclin (S100) {Rat (Rattus norvegicus), s100a1	98.98
d1cb1a_	78	Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}	98.98
d1auib_	165	Calcineurin regulatory subunit (B-chain) {Human (H	98.97
d1yuta1	98	Calcyclin (S100) {Human (Homo sapiens), s100a13 [T	98.97
d1psra_	100	Calcyclin (S100) {Human (Homo sapiens), psoriasin	98.97
d1wlza1	83	DJ-1-binding protein, DJBP {Human (Homo sapiens) [	98.97
d1xk4a1	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	98.95
d3c1va1	93	Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta	98.93
d2jxca1	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	98.93
d1ksoa_	93	Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta	98.93
d1ksoa_	93	Calcyclin (S100) {Human (Homo sapiens), s100a3 [Ta	98.93
d1c07a_	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	98.92
d3c1va1	93	Calcyclin (S100) {Human (Homo sapiens), s100a4 [Ta	98.92
d1xk4a1	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	98.91
d1cb1a_	78	Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}	98.91
d1a4pa_	92	Calcyclin (S100) {Human (Homo sapiens), P11 s100a1	98.9
d2obha1	141	Calmodulin {Human (Homo sapiens) [TaxId: 9606]}	98.9
d1dtla_	156	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	98.85
d2mysc_	145	Myosin Regulatory Chain {Chicken (Gallus gallus) [	98.85
d1wdcb_	142	Myosin Essential Chain {Bay scallop (Aequipecten i	98.85
d1m45a_	146	Myosin Light Chain Mlc1p {Baker's yeast (Saccharom	98.84
d1fi6a_	92	Reps1 {Mouse (Mus musculus) [TaxId: 10090]}	98.84
d1topa_	162	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	98.83
d1k8ua_	89	Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta	98.82
d1ggwa_	140	Cdc4p {Fission yeast (Schizosaccharomyces pombe) [	98.8
d2mysb_	145	Myosin Essential Chain {Chicken (Gallus gallus) [T	98.8
d1iq3a_	110	Pob1 {Human (Homo sapiens) [TaxId: 9606]}	98.79
d1k8ua_	89	Calcyclin (S100) {Human (Homo sapiens), s100a6 [Ta	98.78
d1iq3a_	110	Pob1 {Human (Homo sapiens) [TaxId: 9606]}	98.75
d2hf5a1	33	Troponin C {Human (Homo sapiens), cardiac isoform	98.75
d1qv0a_	189	Calcium-regulated photoprotein {Hydrozoa (Obelia l	98.75
d1qjta_	99	Eps15 {Mouse (Mus musculus) [TaxId: 10090]}	98.75
d1lkja_	146	Calmodulin {Baker's yeast (Saccharomyces cerevisia	98.73
d1psra_	100	Calcyclin (S100) {Human (Homo sapiens), psoriasin	98.73
d1uhka1	187	Calcium-regulated photoprotein {Jellyfish (Aequore	98.73
d1snla_	99	Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [Tax	98.71
d1e8aa_	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	98.7
d1e8aa_	87	Calcyclin (S100) {Human (Homo sapiens), calgranuli	98.7
d1w7jb1	139	Myosin Essential Chain {Human (Homo sapiens) [TaxI	98.7
d1s6ia_	182	Calcium-dependent protein kinase sk5 CLD {Soybean	98.69
d2jxca1	95	Eps15 {Human (Homo sapiens) [TaxId: 9606]}	98.68
d2scpa_	174	Sarcoplasmic calcium-binding protein {Sandworm (Ne	98.66
d1wdcc_	152	Myosin Regulatory Chain {Bay scallop (Aequipecten	98.63
d2sasa_	185	Sarcoplasmic calcium-binding protein {Amphioxus (B	98.63
d1qjta_	99	Eps15 {Mouse (Mus musculus) [TaxId: 10090]}	98.61
d1nyaa_	176	Calerythrin {Saccharopolyspora erythraea [TaxId: 1	98.51
d3cr5x1	90	Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId:	98.39
d3cr5x1	90	Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId:	98.37
d2zkmx1	170	Phospholipase C-beta-2 {Human (Homo sapiens) [TaxI	98.35
d1ctda_	34	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	98.32
d1qlsa_	95	Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1	98.3
d1ij5a_	321	Cbp40 (plasmodial specific CaII-binding protein LA	98.25
d1tuza_	118	Diacylglycerol kinase alpha, N-terminal domain {Hu	98.16
d1j55a_	94	Calcyclin (S100) {Human (Homo sapiens), s100p [Tax	98.12
d1xk4c1	83	Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr	98.11
d1qlsa_	95	Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s1	98.11
d1j55a_	94	Calcyclin (S100) {Human (Homo sapiens), s100p [Tax	98.1
d1xk4c1	83	Calcyclin (S100) {Human (Homo sapiens), s100a9 (mr	98.07
d2hf5a1	33	Troponin C {Human (Homo sapiens), cardiac isoform	98.07
d1ctda_	34	Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}	97.82
d1tuza_	118	Diacylglycerol kinase alpha, N-terminal domain {Hu	97.34
d1sraa_	151	C-terminal (EC) domain of BM-40/SPARC/osteonectin	97.23
d1sraa_	151	C-terminal (EC) domain of BM-40/SPARC/osteonectin	95.73
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	95.11
d1j7qa_	86	Calcium vector protein {Amphioxus (Branchiostoma l	94.84
d1h8ba_	73	alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]}	93.93
d2pula1	392	Methylthioribose kinase MtnK {Bacillus subtilis [T	93.47
d1qasa1	94	Phosphoinositide-specific phospholipase C, isozyme	93.11
d1qasa1	94	Phosphoinositide-specific phospholipase C, isozyme	93.06
d2cclb1	59	Endo-1,4-beta-xylanase Y {Clostridium thermocellum	91.82
d2cclb1	59	Endo-1,4-beta-xylanase Y {Clostridium thermocellum	90.82
d2ppqa1	316	Homoserine kinase ThrB {Agrobacterium tumefaciens	89.58
d1pula1	103	Hypothetical protein c32e8.3 {Caenorhabditis elega	87.67
d1dava_	71	Cellulosome endoglucanase SS {Clostridium thermoce	87.57
d1h8ba_	73	alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]}	87.36
d1dava_	71	Cellulosome endoglucanase SS {Clostridium thermoce	85.84
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	82.62
d1zyla1	325	RdoA {Escherichia coli [TaxId: 562]}	80.86
d1j7qa_	86	Calcium vector protein {Amphioxus (Branchiostoma l	80.47

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.7e-47  Score=357.15  Aligned_cols=189  Identities=45%  Similarity=0.807  Sum_probs=158.7

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||+||+|.+++.+.  +.+++.++..++.||+.||.|||++||+||||||+||++.....++.+||+|||+|+
T Consensus        81 ~~~lvmE~~~gg~L~~~l~~~--~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~  158 (307)
T d1a06a_          81 HLYLIMQLVSGGELFDRIVEK--GFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK  158 (307)
T ss_dssp             EEEEEECCCCSCBHHHHHHTC--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC----
T ss_pred             EEEEEEeccCCCcHHHhhhcc--cCCCHHHHHHHHHHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeE
Confidence            457899999999999999554  689999999999999999999999999999999999999865567899999999998


Q ss_pred             eccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCH
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN  196 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  196 (429)
                      .........+.+||+.|+|||++.+ .++.++||||+||++|+|++|++||.+.........+......++.+.++.+|+
T Consensus       159 ~~~~~~~~~~~~GT~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~  238 (307)
T d1a06a_         159 MEDPGSVLSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWDDISD  238 (307)
T ss_dssp             --------------CTTSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCCTTTTTTSCH
T ss_pred             EccCCCeeeeeeeCccccCcHHHcCCCCCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCCCccccCCCH
Confidence            8776666677889999999999975 469999999999999999999999999999999999999988888877889999


Q ss_pred             HHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          197 SAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       197 ~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      ++++||.+||+.||.+|||++|+++||||+..
T Consensus       239 ~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~  270 (307)
T d1a06a_         239 SAKDFIRHLMEKDPEKRFTCEQALQHPWIAGD  270 (307)
T ss_dssp             HHHHHHHHHSCSSGGGSCCHHHHHHSTTTTSS
T ss_pred             HHHHHHHHHccCCHhHCcCHHHHhcCHhhCCC
Confidence            99999999999999999999999999999864

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.1e-46  Score=342.14  Aligned_cols=200  Identities=26%  Similarity=0.523  Sum_probs=171.3

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG   86 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~   86 (429)
                      +.++|+|++++.+++..            +...|+|||||+||+|.+++.+.  +.+++..++.++.||+.||+|||++|
T Consensus        61 ~~l~hpnIv~~~~~~~~------------~~~~~ivmEy~~~g~L~~~l~~~--~~l~e~~~~~i~~qi~~al~~lH~~~  126 (263)
T d2j4za1          61 SHLRHPNILRLYGYFHD------------ATRVYLILEYAPLGTVYRELQKL--SKFDEQRTATYITELANALSYCHSKR  126 (263)
T ss_dssp             HTCCCTTBCCEEEEEEC------------SSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HhcCCCCCCeEEEEEEE------------CCEEEEEEeecCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHCC
Confidence            34555555555554332            23456899999999999999665  68999999999999999999999999


Q ss_pred             CeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCC
Q 014171           87 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRR  165 (429)
Q Consensus        87 i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~  165 (429)
                      |+||||||+|||++   .++.+||+|||+|...... ......||+.|+|||++.+. ++.++||||+||++|+|++|+.
T Consensus       127 ivHrDiKp~Nill~---~~~~~kl~DFG~a~~~~~~-~~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyell~G~~  202 (263)
T d2j4za1         127 VIHRDIKPENLLLG---SAGELKIADFGWSVHAPSS-RRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKP  202 (263)
T ss_dssp             CCCCCCCGGGEEEC---TTSCEEECCCCSCSCCCCC-CCEETTEEGGGCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSC
T ss_pred             eeeeeeccccceec---CCCCEeecccceeeecCCC-cccccCCCCcccCHHHHcCCCCCchhhhhhHhHHHHHHhcCCC
Confidence            99999999999998   5789999999999876543 33566899999999999864 6899999999999999999999


Q ss_pred             CCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       166 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      ||.+.+.......+....+.++    +.+|+++++||.+||+.||.+|||++|+|+||||+..
T Consensus       203 Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~~~L~~dp~~R~t~~eil~hp~~~~~  261 (263)
T d2j4za1         203 PFEANTYQETYKRISRVEFTFP----DFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITAN  261 (263)
T ss_dssp             TTCCSSHHHHHHHHHTTCCCCC----TTSCHHHHHHHHHHTCSSGGGSCCHHHHHTCHHHHHH
T ss_pred             CCCCCCHHHHHHHHHcCCCCCC----ccCCHHHHHHHHHHccCCHhHCcCHHHHHcCcCcCCc
Confidence            9999999998888888776554    3589999999999999999999999999999999753

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-45  Score=339.79  Aligned_cols=206  Identities=17%  Similarity=0.252  Sum_probs=165.0

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH   85 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~   85 (429)
                      ++.++|+|++++++.+....  ..      ....|+|||||+||+|.+++.+.  ..+++..++.++.||+.||+|||++
T Consensus        62 l~~l~HpnIv~~~~~~~~~~--~~------~~~~~ivmE~~~~g~L~~~l~~~--~~~~~~~~~~~~~qi~~gl~yLH~~  131 (270)
T d1t4ha_          62 LKGLQHPNIVRFYDSWESTV--KG------KKCIVLVTELMTSGTLKTYLKRF--KVMKIKVLRSWCRQILKGLQFLHTR  131 (270)
T ss_dssp             HTTCCCTTBCCEEEEEEEES--SS------CEEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHTS
T ss_pred             HHhCCCCCeeeEEEEEeecc--cc------CCEEEEEEeCCCCCcHHHHHhcc--ccccHHHHHHHHHHHHHHHHHHHHC
Confidence            34556666666555443210  00      11236899999999999999665  6899999999999999999999999


Q ss_pred             C--CeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccCCCCCCcchHHHHHHHHHHhhC
Q 014171           86 G--LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRKSGPESDVWSIGVITYILLCG  163 (429)
Q Consensus        86 ~--i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~DiwslG~il~~l~~g  163 (429)
                      |  |+||||||+|||++.  .++.+||+|||+|+.... ....+.+||+.|+|||++.+.++.++||||+||++|+|++|
T Consensus       132 ~~~IiHrDiKp~NILl~~--~~~~~Kl~DFGla~~~~~-~~~~~~~GT~~Y~aPE~~~~~~~~~~DIwSlGvilyel~~g  208 (270)
T d1t4ha_         132 TPPIIHRDLKCDNIFITG--PTGSVKIGDLGLATLKRA-SFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATS  208 (270)
T ss_dssp             SSCCCCSCCCGGGEEESS--TTSCEEECCTTGGGGCCT-TSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHS
T ss_pred             CCCEEeCCcChhhceeeC--CCCCEEEeecCcceeccC-CccCCcccCccccCHHHhCCCCCCcCchhhHHHHHHHHHHC
Confidence            9  999999999999973  467899999999975443 33456789999999999999899999999999999999999


Q ss_pred             CCCCCCCChhH-HHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccc
Q 014171          164 RRPFWDKTEDG-IFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVR  226 (429)
Q Consensus       164 ~~pf~~~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~  226 (429)
                      +.||.+..... ....+..+..  +.......++++++||.+||+.||++|||++|+|+||||+
T Consensus       209 ~~Pf~~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~ell~Hp~fk  270 (270)
T d1t4ha_         209 EYPYSECQNAAQIYRRVTSGVK--PASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQ  270 (270)
T ss_dssp             SCTTTTCSSHHHHHHHHTTTCC--CGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGC
T ss_pred             CCCCCCcccHHHHHHHHHcCCC--CcccCccCCHHHHHHHHHHccCCHhHCcCHHHHhCCcccC
Confidence            99997765444 4444444332  2222345789999999999999999999999999999996

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-45  Score=341.35  Aligned_cols=185  Identities=29%  Similarity=0.480  Sum_probs=159.8

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||+||+|.+++.+   +.+++.+++.++.||+.||+|||++||+||||||+|||++   .++.+||+|||+|
T Consensus        90 ~~~~ivmEy~~gg~L~~~~~~---~~l~~~~~~~i~~qi~~aL~yLH~~~iiHrDiKp~NILl~---~~~~vkl~DFG~a  163 (293)
T d1yhwa1          90 DELWVVMEYLAGGSLTDVVTE---TCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLG---MDGSVKLTDFGFC  163 (293)
T ss_dssp             TEEEEEEECCTTCBHHHHHHH---SCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTC
T ss_pred             CEEEEEEEecCCCcHHHHhhc---cCCCHHHHHHHHHHHHHHHHHHHHCCCcccCCcHHHeEEC---CCCcEeeccchhh
Confidence            345789999999999987744   4799999999999999999999999999999999999998   5789999999999


Q ss_pred             eeccCCC-cccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          117 DFIKPGK-KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       117 ~~~~~~~-~~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      +.+.... .....+||+.|+|||++.+. ++.++||||+||++|+|++|+.||.+.+.......+...... ....++.+
T Consensus       164 ~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~~~~-~~~~~~~~  242 (293)
T d1yhwa1         164 AQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATNGTP-ELQNPEKL  242 (293)
T ss_dssp             EECCSTTCCBCCCCSCGGGCCHHHHSSSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHHCSC-CCSSGGGS
T ss_pred             eeeccccccccccccCCCccChhhhcCCCCCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhCCCC-CCCCcccC
Confidence            8875433 44566899999999999764 689999999999999999999999988887777666655432 22334578


Q ss_pred             CHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      ++++++||.+||+.||.+|||++|+|+||||+..
T Consensus       243 s~~~~~li~~~L~~dP~~R~s~~eil~Hp~~~~~  276 (293)
T d1yhwa1         243 SAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIA  276 (293)
T ss_dssp             CHHHHHHHHHHTCSSTTTSCCHHHHTTCGGGGGC
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCC
Confidence            9999999999999999999999999999999864

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.9e-46  Score=341.09  Aligned_cols=186  Identities=32%  Similarity=0.550  Sum_probs=155.7

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||+||+|.+++.  +.+.+++.+++.++.||+.||+|||++||+||||||+|||++   .++.+||+|||+|
T Consensus        76 ~~~~ivmEy~~gg~L~~~l~--~~~~l~e~~~~~i~~qi~~al~ylH~~~IiHrDiKp~NILl~---~~~~~KL~DFG~a  150 (271)
T d1nvra_          76 NIQYLFLEYCSGGELFDRIE--PDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLD---ERDNLKISDFGLA  150 (271)
T ss_dssp             TEEEEEEECCTTEEGGGGSB--TTTBCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEC---TTCCEEECCCTTC
T ss_pred             ceeEEEEeccCCCcHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHcCCccCcccHHHEEEC---CCCCEEEccchhh
Confidence            34578999999999999884  346899999999999999999999999999999999999998   4788999999999


Q ss_pred             eeccCCC---cccccccCCcccccccccCC-C-CCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCC
Q 014171          117 DFIKPGK---KFQDIVGSAYYVAPEVLKRK-S-GPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPW  191 (429)
Q Consensus       117 ~~~~~~~---~~~~~~g~~~y~aPE~~~~~-~-~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  191 (429)
                      +......   .....+||+.|+|||++.+. + +.++||||+||++|+|++|++||.+................ ....+
T Consensus       151 ~~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~~~~~~~~-~~~~~  229 (271)
T d1nvra_         151 TVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKKT-YLNPW  229 (271)
T ss_dssp             EECEETTEECCBCCCCSCGGGSCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSSTTSHHHHHHHTTCT-TSTTG
T ss_pred             eeeccCCccccccceeeCcCccCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCChHHHHHHHHhcCCC-CCCcc
Confidence            8764332   23567899999999998653 3 57899999999999999999999876655444333333322 22345


Q ss_pred             CCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          192 PSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       192 ~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      +.+|+++++||.+||+.||.+|||++|+++||||++.
T Consensus       230 ~~~s~~~~~li~~~L~~dP~~R~t~~eil~hpwf~~~  266 (271)
T d1nvra_         230 KKIDSAPLALLHKILVENPSARITIPDIKKDRWYNKP  266 (271)
T ss_dssp             GGSCHHHHHHHHHHSCSSTTTSCCHHHHTTCTTTTCC
T ss_pred             ccCCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCcC
Confidence            6789999999999999999999999999999999864

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=4.1e-45  Score=348.31  Aligned_cols=211  Identities=33%  Similarity=0.586  Sum_probs=182.7

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH   85 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~   85 (429)
                      ++.++|+|++++++++..            +...|+|||||+||+|.+++... +..+++.+++.++.||+.||.|||++
T Consensus        80 l~~l~HpnIv~~~~~~~~------------~~~~~ivmE~~~gg~L~~~~~~~-~~~l~e~~~~~i~~qi~~aL~ylH~~  146 (352)
T d1koba_          80 MNQLHHPKLINLHDAFED------------KYEMVLILEFLSGGELFDRIAAE-DYKMSEAEVINYMRQACEGLKHMHEH  146 (352)
T ss_dssp             HTTCCSTTBCCEEEEEEC------------SSEEEEEEECCCCCBHHHHTTCT-TCCBCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHhCCCCCCCcEEEEEEE------------CCEEEEEEEcCCCChHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHC
Confidence            345566666665554432            23346899999999999877443 35799999999999999999999999


Q ss_pred             CCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCC
Q 014171           86 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGR  164 (429)
Q Consensus        86 ~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~  164 (429)
                      ||+||||||+|||++.. ..+.+||+|||+|.............||+.|+|||++.+. ++.++||||+||++|+|+||+
T Consensus       147 ~iiHRDiKp~NILl~~~-~~~~vkL~DFGla~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyelltG~  225 (352)
T d1koba_         147 SIVHLDIKPENIMCETK-KASSVKIIDFGLATKLNPDEIVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGL  225 (352)
T ss_dssp             TEECCCCCGGGEEESST-TCCCEEECCCTTCEECCTTSCEEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSC
T ss_pred             Ceeeccccccccccccc-CCCeEEEeecccceecCCCCceeeccCcccccCHHHHcCCCCCCccchHHHHHHHHHHHhCC
Confidence            99999999999999742 3578999999999988877777778899999999999754 689999999999999999999


Q ss_pred             CCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          165 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       165 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                      .||.+.+....+..+......++...++.+|+++++||.+||+.||.+|||++|+|+||||+....
T Consensus       226 ~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~Hp~~~~~~~  291 (352)
T d1koba_         226 SPFAGEDDLETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWLKGDHS  291 (352)
T ss_dssp             CSSCCSSHHHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTSTTTSSCCT
T ss_pred             CCCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhCCCcc
Confidence            999999999999999999888888888899999999999999999999999999999999987543

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=3.6e-45  Score=348.41  Aligned_cols=210  Identities=31%  Similarity=0.584  Sum_probs=181.6

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG   86 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~   86 (429)
                      ..++|+|++.+++++..            ....|+|||||+||+|.+++.+. .+.+++..++.++.||+.||.|||++|
T Consensus        78 ~~l~HpnIv~~~~~~~~------------~~~~~ivmE~~~gg~L~~~l~~~-~~~l~e~~~~~i~~qi~~aL~ylH~~~  144 (350)
T d1koaa2          78 SVLRHPTLVNLHDAFED------------DNEMVMIYEFMSGGELFEKVADE-HNKMSEDEAVEYMRQVCKGLCHMHENN  144 (350)
T ss_dssp             HHTCCTTBCCEEEEEEE------------TTEEEEEECCCCSCBHHHHHTCT-TSCBCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HhCCCCCCCcEEEEEEE------------CCEEEEEEEcCCCCCHHHHHHhh-cCCCCHHHHHHHHHHHHHHHHHHHhcC
Confidence            34556666655554432            23457899999999999988543 357999999999999999999999999


Q ss_pred             CeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCC
Q 014171           87 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRR  165 (429)
Q Consensus        87 i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~  165 (429)
                      |+||||||+|||++.. .++.+||+|||+|+.+..........||+.|+|||++.+ .++.++||||+||++|+|++|+.
T Consensus       145 iiHrDiKp~NIll~~~-~~~~vkL~DFG~a~~~~~~~~~~~~~gT~~Y~aPEv~~~~~~~~~~DiwSlGvilyell~G~~  223 (350)
T d1koaa2         145 YVHLDLKPENIMFTTK-RSNELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLS  223 (350)
T ss_dssp             EECCCCCGGGEEESST-TSCCEEECCCTTCEECCTTSCEEEECSCTTTCCHHHHHTCCBCHHHHHHHHHHHHHHHHHSSC
T ss_pred             CeeeeechhHeeeccC-CCCeEEEeecchheecccccccceecCcccccCHHHHcCCCCChhHhhhhhhHHHHHHHhCCC
Confidence            9999999999999742 357899999999998877776677899999999999975 46889999999999999999999


Q ss_pred             CCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       166 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                      ||.+.+..+.+..+......++...++.+|+++++||.+||+.||.+|||++|+|+||||+....
T Consensus       224 Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~eil~hp~~~~~~~  288 (350)
T d1koaa2         224 PFGGENDDETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPGNA  288 (350)
T ss_dssp             SSCCSSHHHHHHHHHHTCCCSCCGGGGGCCHHHHHHHHHHCCSSGGGSCCHHHHHHSTTTSCTTC
T ss_pred             CCCCCCHHHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCCC
Confidence            99999999999999988887777777789999999999999999999999999999999997643

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-45  Score=339.56  Aligned_cols=187  Identities=29%  Similarity=0.448  Sum_probs=161.0

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||+||+|.+++.+. .+.+++.+++.++.||+.||.|||++||+||||||+|||++   .++.+||+|||+|
T Consensus        82 ~~~~lvmEy~~~g~L~~~~~~~-~~~l~e~~~~~i~~qi~~gL~ylH~~~ivHrDiKp~NIll~---~~~~~Kl~DFG~a  157 (288)
T d2jfla1          82 NNLWILIEFCAGGAVDAVMLEL-ERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAGNILFT---LDGDIKLADFGVS  157 (288)
T ss_dssp             TEEEEEEECCTTEEHHHHHHHH-TSCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTC
T ss_pred             CeEEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHCCEEEeecChhheeEC---CCCCEEEEechhh
Confidence            4457899999999999987654 36799999999999999999999999999999999999998   5789999999999


Q ss_pred             eeccCC-CcccccccCCccccccccc------CCCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCC
Q 014171          117 DFIKPG-KKFQDIVGSAYYVAPEVLK------RKSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK  189 (429)
Q Consensus       117 ~~~~~~-~~~~~~~g~~~y~aPE~~~------~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  189 (429)
                      ...... ....+..||+.|+|||++.      ..++.++||||+||++|+|++|++||.+.+..+....+..+.+... .
T Consensus       158 ~~~~~~~~~~~~~~Gt~~y~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~~~~~~-~  236 (288)
T d2jfla1         158 AKNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTL-A  236 (288)
T ss_dssp             EECHHHHHHHTCCCSCCTTCCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHSCCCCC-S
T ss_pred             hccCCCcccccccccccccCCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCC-C
Confidence            765432 2234568999999999983      3458899999999999999999999999999888888887764322 2


Q ss_pred             CCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          190 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       190 ~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      .++.+|+++++||.+||+.||.+|||++|+++||||+..
T Consensus       237 ~~~~~s~~~~~li~~~L~~dp~~R~t~~ell~hp~~~~~  275 (288)
T d2jfla1         237 QPSRWSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVD  275 (288)
T ss_dssp             SGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTSGGGCCC
T ss_pred             ccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCC
Confidence            235689999999999999999999999999999999753

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-46  Score=352.55  Aligned_cols=218  Identities=29%  Similarity=0.557  Sum_probs=174.2

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG   86 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~   86 (429)
                      +..+|+|+++++.++....        ......|+|||||+||+|.+++.++....+++.+++.++.||+.||.|||++|
T Consensus        60 ~~~~hpnIv~l~~~~~~~~--------~~~~~~~ivmEy~~gg~L~~~i~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~  131 (335)
T d2ozaa1          60 RASQCPHIVRIVDVYENLY--------AGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSIN  131 (335)
T ss_dssp             HHTTSTTBCCEEEEEEEEE--------TTEEEEEEEEECCCSEEHHHHHHSCSCCCEEHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HhcCCCCCCeEEEEEeecc--------cCCCEEEEEEECCCCCcHHHHHHhcCCCCcCHHHHHHHHHHHHHHHHHHHHcC
Confidence            3446666666666553210        00122468999999999999997665567999999999999999999999999


Q ss_pred             CeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCC
Q 014171           87 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRR  165 (429)
Q Consensus        87 i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~  165 (429)
                      |+||||||+|||++.....+.+||+|||+|+............||+.|+|||++.+ .++.++||||+||++|+|+||++
T Consensus       132 iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~y~~~~DiwSlGvily~lltg~~  211 (335)
T d2ozaa1         132 IAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYP  211 (335)
T ss_dssp             EECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCCCCCCCSCCCSSCCCCCCCGGGGSHHHHHHHHHHHHHHHTTSSC
T ss_pred             CccccccccccccccccccccccccccceeeeccCCCccccccCCcccCCcHHHcCCCCCHHHHHHhhchhHHHHhhCCC
Confidence            99999999999999655677899999999998877666677899999999999975 46899999999999999999999


Q ss_pred             CCCCCChhHHHHHHH----hcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCCC
Q 014171          166 PFWDKTEDGIFKEVL----RNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDAS  232 (429)
Q Consensus       166 pf~~~~~~~~~~~i~----~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~~  232 (429)
                      ||.+.+.......+.    .....++.+.++.+|+++++||.+||+.||.+|||+.|+++||||++.....
T Consensus       212 Pf~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~~~~  282 (335)
T d2ozaa1         212 PFYSNHGLAISPGMKTRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQSTKVP  282 (335)
T ss_dssp             SCEETTCC--------CCCSCSSSCCTTHHHHSCHHHHHHHHHHSCSSTTTSCCHHHHHHSHHHHTTTSSC
T ss_pred             CCCCCCHHHHHHHHHHHHhcCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHhhCCCCCC
Confidence            998776655444333    3334444444557899999999999999999999999999999998754433

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=1.1e-44  Score=334.31  Aligned_cols=201  Identities=34%  Similarity=0.648  Sum_probs=177.5

Q ss_pred             cccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeec
Q 014171           11 SANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHR   90 (429)
Q Consensus        11 ~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~   90 (429)
                      |+|++++..++..            +...|+|||||+||+|.+++..+  +.+++.+++.++.||+.||+|||++||+||
T Consensus        69 hpnIv~~~~~~~~------------~~~~~ivmE~~~~g~L~~~l~~~--~~l~e~~~~~~~~qi~~al~~lH~~~ivHr  134 (277)
T d1phka_          69 HPNIIQLKDTYET------------NTFFFLVFDLMKKGELFDYLTEK--VTLSEKETRKIMRALLEVICALHKLNIVHR  134 (277)
T ss_dssp             CTTBCCEEEEEEC------------SSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECS
T ss_pred             CCCeEEEEeeccc------------CcceEEEEEcCCCchHHHHHHhc--CCCCHHHHHHHHHHHHHHHHHHHHcCCccc
Confidence            5565555554432            23346899999999999999665  689999999999999999999999999999


Q ss_pred             CCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccC-------CCCCCcchHHHHHHHHHHhhC
Q 014171           91 DMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-------KSGPESDVWSIGVITYILLCG  163 (429)
Q Consensus        91 dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~-------~~~~~~DiwslG~il~~l~~g  163 (429)
                      ||||+||+++   .++.+||+|||+|+.+..........||+.|+|||.+.+       .++.++||||+||++|+|++|
T Consensus       135 Dlkp~Nill~---~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g  211 (277)
T d1phka_         135 DLKPENILLD---DDMNIKLTDFGFSCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAG  211 (277)
T ss_dssp             CCSGGGEEEC---TTCCEEECCCTTCEECCTTCCBCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHS
T ss_pred             ccccceEEEc---CCCCeEEccchheeEccCCCceeeeeccCCCCCHHHhhccccccCCCCCchheEcccchhhhhhccC
Confidence            9999999998   588999999999998877666677789999999999852       347889999999999999999


Q ss_pred             CCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          164 RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       164 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      +.||.+.+.......+..+...++.+.++.+|+++++||.+||+.||.+|||++|+++||||++.
T Consensus       212 ~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~p~~R~s~~eil~h~~~~~~  276 (277)
T d1phka_         212 SPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQY  276 (277)
T ss_dssp             SCSSCCSSHHHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTTSGGGCTT
T ss_pred             CCCCCCCCHHHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHccCChhHCcCHHHHHcCHHHHHh
Confidence            99999999999999999988887777778899999999999999999999999999999999864

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.4e-45  Score=338.72  Aligned_cols=191  Identities=37%  Similarity=0.647  Sum_probs=170.3

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecC-CCCCEEEeeccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK-EDSSLKATDFGL  115 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~-~~~~~kL~Dfg~  115 (429)
                      ...|+|||||+||+|.+++.+.  +.+++..++.++.||+.||+|||++||+||||||+||+++..+ ....+||+|||+
T Consensus        86 ~~~~iv~E~~~gg~L~~~i~~~--~~l~~~~~~~~~~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~  163 (293)
T d1jksa_          86 TDVILILELVAGGELFDFLAEK--ESLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL  163 (293)
T ss_dssp             SEEEEEEECCCSCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTT
T ss_pred             CEEEEEEEcCCCccccchhccc--cccchhHHHHHHHHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhh
Confidence            3456899999999999999665  5899999999999999999999999999999999999998532 234699999999


Q ss_pred             ceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCC
Q 014171          116 SDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSI  194 (429)
Q Consensus       116 a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  194 (429)
                      |..........+..||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+.+..+....+......++...++.+
T Consensus       164 a~~~~~~~~~~~~~~t~~y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~  243 (293)
T d1jksa_         164 AHKIDFGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFSNT  243 (293)
T ss_dssp             CEECTTSCBCSCCCCCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCCHHHHTTS
T ss_pred             hhhcCCCccccccCCCCcccCHHHHcCCCCCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcCCCCCchhcCCC
Confidence            998877777777889999999999975 4689999999999999999999999999999999999988877776666789


Q ss_pred             CHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          195 SNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       195 ~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      |+.+++||.+||+.||.+|||++++++||||+...
T Consensus       244 s~~~~~li~~~L~~dP~~R~s~~eil~hp~~~~~~  278 (293)
T d1jksa_         244 SALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKD  278 (293)
T ss_dssp             CHHHHHHHHTTSCSSGGGSCCHHHHHHSTTTCC--
T ss_pred             CHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCC
Confidence            99999999999999999999999999999998643

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-44  Score=335.66  Aligned_cols=183  Identities=32%  Similarity=0.558  Sum_probs=159.5

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||+||+|.+++...  +.+++..++.++.|++.||+|||++||+||||||+||+++   .++.+||+|||+|+
T Consensus        82 ~~~ivmEy~~gg~L~~~~~~~--~~l~e~~~~~~~~qi~~al~ylH~~~iiHrDiKp~NIll~---~~~~vkl~DFG~a~  156 (288)
T d1uu3a_          82 KLYFGLSYAKNGELLKYIRKI--GSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLN---EDMHIQITDFGTAK  156 (288)
T ss_dssp             EEEEEECCCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---TTSCEEECCCTTCE
T ss_pred             EEEEEEEccCCCCHHHhhhcc--CCCCHHHHHHHHHHHHHHHHhhccccEEcCcCCccccccC---CCceEEecccccce
Confidence            346899999999999988665  6899999999999999999999999999999999999998   57899999999998


Q ss_pred             eccCCC---cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          118 FIKPGK---KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       118 ~~~~~~---~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      .+....   .....+||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+.+......++......++    ..
T Consensus       157 ~~~~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~p----~~  232 (288)
T d1uu3a_         157 VLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFP----EK  232 (288)
T ss_dssp             ECC----------CCCCGGGCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTCCCCC----TT
T ss_pred             ecccCCcccccccccCCccccCceeeccCCCCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcCCCCCC----cc
Confidence            765322   3345689999999999975 568899999999999999999999999999999999988876554    36


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHH------HhCCCccccCC
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQ------ALSHPWVREGG  229 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e------~l~h~~~~~~~  229 (429)
                      +++++++||.+||+.||.+|||++|      +++||||++..
T Consensus       233 ~s~~~~~li~~~L~~dP~~R~t~~e~~~~~~i~~Hpff~~i~  274 (288)
T d1uu3a_         233 FFPKARDLVEKLLVLDATKRLGCEEMEGYGPLKAHPFFESVT  274 (288)
T ss_dssp             CCHHHHHHHHTTSCSSGGGSTTSGGGTCHHHHHTSGGGTTCC
T ss_pred             CCHHHHHHHHHHccCCHhHCcCHHHHcCCHHHHcCCccCCCC
Confidence            8999999999999999999999987      58899998753

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5.1e-44  Score=334.84  Aligned_cols=201  Identities=25%  Similarity=0.356  Sum_probs=166.7

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG   86 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~   86 (429)
                      ..++|+|++++++.+..            +...|+|||||.||+|..++...  +.+++.+++.++.||+.||.|||++|
T Consensus        70 ~~l~HpnIv~~~~~~~~------------~~~~~iv~E~~~~g~l~~~~~~~--~~l~e~~~~~i~~qi~~aL~yLH~~~  135 (309)
T d1u5ra_          70 QKLRHPNTIQYRGCYLR------------EHTAWLVMEYCLGSASDLLEVHK--KPLQEVEIAAVTHGALQGLAYLHSHN  135 (309)
T ss_dssp             TTCCCTTBCCEEEEEEE------------TTEEEEEEECCSEEHHHHHHHHT--SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHCCCCCEeeEEEEEEE------------CCEEEEEEEecCCCchHHHHHhC--CCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            44555555555554332            33457899999999887665443  68999999999999999999999999


Q ss_pred             CeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccC----CCCCCcchHHHHHHHHHHhh
Q 014171           87 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLC  162 (429)
Q Consensus        87 i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~----~~~~~~DiwslG~il~~l~~  162 (429)
                      |+||||||+|||++   .++.+||+|||+|......   ....||+.|+|||++.+    .++.++||||+||++|+|++
T Consensus       136 iiHrDiKp~NILl~---~~~~~Kl~DFG~a~~~~~~---~~~~GT~~Y~APE~~~~~~~~~y~~~~DiwSlGvilyel~~  209 (309)
T d1u5ra_         136 MIHRDVKAGNILLS---EPGLVKLGDFGSASIMAPA---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAE  209 (309)
T ss_dssp             CBCCCCSGGGEEEE---TTTEEEECCCTTCBSSSSB---CCCCSCGGGCCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHH
T ss_pred             EeccCCCcceEEEC---CCCCEEEeecccccccCCC---CccccCccccCHHHHhccCCCCcCchhhhhhHHHHHHHHHH
Confidence            99999999999999   5789999999999865432   45689999999999853    46889999999999999999


Q ss_pred             CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          163 GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       163 g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      |..||.+.+....+..+..+.....  ....+|+++++||.+||+.||.+|||++++|+||||....
T Consensus       210 g~~Pf~~~~~~~~~~~i~~~~~~~~--~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~Hp~~~~~~  274 (309)
T d1u5ra_         210 RKPPLFNMNAMSALYHIAQNESPAL--QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRER  274 (309)
T ss_dssp             SSCTTTTSCHHHHHHHHHHSCCCCC--SCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTCHHHHSCC
T ss_pred             CCCCCCCCCHHHHHHHHHhCCCCCC--CCCCCCHHHHHHHHHHCcCChhHCcCHHHHHhCHHhcCCC
Confidence            9999999888888877777654332  2346899999999999999999999999999999998653

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-44  Score=329.01  Aligned_cols=181  Identities=25%  Similarity=0.436  Sum_probs=149.0

Q ss_pred             ceeEeeecCCCChHHHHHhh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC-----CeecCCCCCcEEEeecCCCCCEEEe
Q 014171           39 KLRRIRLCEGGELLDRILAK--KDSRYTEKDAAVVVRQMLRVAAECHLHG-----LVHRDMKPENFLFKSAKEDSSLKAT  111 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~--~~~~l~~~~~~~i~~qil~aL~~lH~~~-----i~H~dikp~Nil~~~~~~~~~~kL~  111 (429)
                      .|+|||||+||+|.+++.+.  .+..+++..++.++.||+.||+|||++|     |+||||||+|||++   .++.+||+
T Consensus        80 ~~ivmEy~~~g~L~~~i~~~~~~~~~l~e~~~~~i~~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~---~~~~vkl~  156 (269)
T d2java1          80 LYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLD---GKQNVKLG  156 (269)
T ss_dssp             EEEEEECCTTEEHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHHHHCC---------CCGGGEEEC---TTSCEEEC
T ss_pred             EEEEEecCCCCcHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcC---CCCcEEEe
Confidence            46899999999999998653  3467999999999999999999999976     99999999999998   57899999


Q ss_pred             ecccceeccCCC-cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCC
Q 014171          112 DFGLSDFIKPGK-KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK  189 (429)
Q Consensus       112 Dfg~a~~~~~~~-~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  189 (429)
                      |||+|+...... ......||+.|+|||++.+ .++.++||||+||++|+|+||+.||.+.+..+....+..+....   
T Consensus       157 DFG~a~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~~~---  233 (269)
T d2java1         157 DFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRR---  233 (269)
T ss_dssp             CHHHHHHC-----------CCCSCCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCC---
T ss_pred             eccceeecccCCCccccCCCCcccCCHHHHcCCCCChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCC---
Confidence            999998765433 3356789999999999965 56899999999999999999999999999888888888776432   


Q ss_pred             CCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcc
Q 014171          190 PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWV  225 (429)
Q Consensus       190 ~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~  225 (429)
                      .+..+|+++++||.+||+.||.+|||++|+++|||+
T Consensus       234 ~~~~~s~~l~~li~~~L~~dp~~Rps~~ell~hp~i  269 (269)
T d2java1         234 IPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI  269 (269)
T ss_dssp             CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTC
T ss_pred             CCcccCHHHHHHHHHHcCCChhHCcCHHHHHhCCcC
Confidence            234689999999999999999999999999999995

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.9e-44  Score=337.15  Aligned_cols=181  Identities=30%  Similarity=0.547  Sum_probs=163.4

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|||||+||+|.+++.+.  +.+++..++.++.||+.||+|||++||+||||||+|||++   .++++||+|||+|+.
T Consensus        80 ~~iv~ey~~gg~L~~~~~~~--~~~~e~~~~~~~~qil~al~ylH~~~iiHRDlKP~NILl~---~~g~vkl~DFG~a~~  154 (337)
T d1o6la_          80 LCFVMEYANGGELFFHLSRE--RVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLD---KDGHIKITDFGLCKE  154 (337)
T ss_dssp             EEEEEECCTTCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEEC---TTSCEEECCCTTCBC
T ss_pred             cccceeccCCCchhhhhhcc--cCCcHHHHHHHHHHHhhhhhhhhhcCccccccCHHHeEec---CCCCEEEeecccccc
Confidence            46899999999999998665  6899999999999999999999999999999999999998   578999999999987


Q ss_pred             ccC-CCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCH
Q 014171          119 IKP-GKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN  196 (429)
Q Consensus       119 ~~~-~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  196 (429)
                      ... .......+||+.|+|||++.+ .++.++||||+||++|+|++|++||.+.+...+...+..+...++    ..+|+
T Consensus       155 ~~~~~~~~~~~~GT~~Y~aPE~~~~~~y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~~~~~p----~~~s~  230 (337)
T d1o6la_         155 GISDGATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIRFP----RTLSP  230 (337)
T ss_dssp             SCCTTCCBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTSCH
T ss_pred             cccCCcccccceeCHHHhhhhhccCCCCChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcCCCCCC----ccCCH
Confidence            643 344566789999999999975 569999999999999999999999999999999999988876654    46899


Q ss_pred             HHHHHHHHhccCCccCcCC-----HHHHhCCCccccC
Q 014171          197 SAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG  228 (429)
Q Consensus       197 ~~~~li~~~l~~dp~~R~s-----~~e~l~h~~~~~~  228 (429)
                      ++++||.+||+.||.+|++     ++++++||||++.
T Consensus       231 ~~~dli~~~L~~dP~~R~~~~~~~~~eil~Hp~f~~i  267 (337)
T d1o6la_         231 EAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSI  267 (337)
T ss_dssp             HHHHHHHHHTCSSTTTSTTCSTTTHHHHHTSGGGTTC
T ss_pred             HHHHHHHhhccCCchhhcccccccHHHHHcCcccccC
Confidence            9999999999999999994     9999999999864

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-44  Score=337.19  Aligned_cols=208  Identities=29%  Similarity=0.550  Sum_probs=179.8

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG   86 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~   86 (429)
                      +.++|+|++++++.+..            ....|+|||||+||+|.+++.+. +..+++.+++.++.||+.||+|||++|
T Consensus        56 ~~l~HpnIv~~~~~~~~------------~~~~~lvmE~~~gg~L~~~i~~~-~~~l~e~~~~~i~~qi~~al~yLH~~~  122 (321)
T d1tkia_          56 NIARHRNILHLHESFES------------MEELVMIFEFISGLDIFERINTS-AFELNEREIVSYVHQVCEALQFLHSHN  122 (321)
T ss_dssp             HHSCCTTBCCEEEEEEE------------TTEEEEEECCCCCCBHHHHHTSS-SCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HhCCCCCCCeEEEEEEE------------CCEEEEEEecCCCCcHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence            45556666665554432            23457899999999999988543 347999999999999999999999999


Q ss_pred             CeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCC
Q 014171           87 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRR  165 (429)
Q Consensus        87 i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~  165 (429)
                      |+||||||+|||++.. ....+||+|||++.............+++.|+|||.+.+ .++.++||||+||++|+|++|..
T Consensus       123 iiHrDlKp~NIll~~~-~~~~ikl~DFG~~~~~~~~~~~~~~~~t~~y~ape~~~~~~~~~~~DiWSlGvily~ll~G~~  201 (321)
T d1tkia_         123 IGHFDIRPENIIYQTR-RSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGIN  201 (321)
T ss_dssp             EECCCCCGGGEEESSS-SCCCEEECCCTTCEECCTTCEEEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSC
T ss_pred             CCcccccccceeecCC-CceEEEEcccchhhccccCCcccccccccccccchhccCCCCCchhhcccHHHHHHHHHhCCC
Confidence            9999999999999742 346899999999998876666677789999999999865 45889999999999999999999


Q ss_pred             CCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       166 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      ||.+.+....+..+......++...++.+|+++++||.+||+.||.+|||++|+++||||++.
T Consensus       202 Pf~~~~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~  264 (321)
T d1tkia_         202 PFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK  264 (321)
T ss_dssp             TTCCSSHHHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHSHHHHSC
T ss_pred             CCCCCCHHHHHHHHHhCCCCCChhhccCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccC
Confidence            999999999999999998888777777899999999999999999999999999999999864

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=6.4e-43  Score=328.54  Aligned_cols=199  Identities=26%  Similarity=0.497  Sum_probs=170.6

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG   86 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~   86 (429)
                      +.++|||++++..++..            +...|+|||||.||+|..++...  ..+++..++.++.||+.||.|||++|
T Consensus        59 ~~l~HpnIv~~~~~~~~------------~~~~~ivmE~~~gg~l~~~~~~~--~~~~~~~~~~~~~qi~~al~~lH~~~  124 (316)
T d1fota_          59 SIVTHPFIIRMWGTFQD------------AQQIFMIMDYIEGGELFSLLRKS--QRFPNPVAKFYAAEVCLALEYLHSKD  124 (316)
T ss_dssp             HSCCBTTBCCEEEEEEC------------SSEEEEEECCCCSCBHHHHHHHT--SSCCHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             HhccCcChhheeeeEee------------CCeeeeEeeecCCcccccccccc--ccccccHHHHHHHHHHHhhhhhccCc
Confidence            34455555555544332            33456899999999999988554  68999999999999999999999999


Q ss_pred             CeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCC
Q 014171           87 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRR  165 (429)
Q Consensus        87 i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~  165 (429)
                      |+||||||+|||++   .++.+||+|||+|+.....  ..+.+||+.|+|||++.+. ++.++||||+||++|+|++|+.
T Consensus       125 iiHrDiKp~NILl~---~~g~vkL~DFG~a~~~~~~--~~~~~Gt~~Y~APE~l~~~~y~~~~DiwSlGvilyemltG~~  199 (316)
T d1fota_         125 IIYRDLKPENILLD---KNGHIKITDFGFAKYVPDV--TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYT  199 (316)
T ss_dssp             EECCCCCGGGEEEC---TTSCEEECCCSSCEECSSC--BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSC
T ss_pred             EEccccCchheeEc---CCCCEEEecCccceEeccc--cccccCcccccCHHHHcCCCCCchhhccccchhHHHHHhCCC
Confidence            99999999999998   5789999999999876543  3467899999999999764 6899999999999999999999


Q ss_pred             CCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcC-----CHHHHhCCCccccC
Q 014171          166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG  228 (429)
Q Consensus       166 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~-----s~~e~l~h~~~~~~  228 (429)
                      ||.+.+......++..+...++    +.++++++++|.+||+.||.+|+     |++++++||||++.
T Consensus       200 Pf~~~~~~~~~~~i~~~~~~~p----~~~s~~~~~li~~~L~~dp~~R~~~~r~t~~~il~Hp~f~~i  263 (316)
T d1fota_         200 PFYDSNTMKTYEKILNAELRFP----PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEV  263 (316)
T ss_dssp             TTCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHTSGGGSSC
T ss_pred             CCCCcCHHHHHHHHHcCCCCCC----CCCCHHHHHHHHHHhhhCHHhccccchhhHHHHHcCcccccC
Confidence            9999999999999988876554    46899999999999999999996     89999999999875

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-43  Score=333.36  Aligned_cols=183  Identities=25%  Similarity=0.403  Sum_probs=148.3

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~-~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ..|+|||||+||+|.+++.+.  +.+++..++.++.||+.||.|||+ +||+||||||+|||++   .++.+||+|||+|
T Consensus        78 ~~~iVmEy~~gg~L~~~l~~~--~~l~~~~~~~~~~qil~aL~yLH~~~~IiHRDiKP~NILl~---~~~~vkl~DFGla  152 (322)
T d1s9ja_          78 EISICMEHMDGGSLDQVLKKA--GRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVN---SRGEIKLCDFGVS  152 (322)
T ss_dssp             EEEEEEECCTTEEHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEEC---TTCCEEECCCCCC
T ss_pred             EEEEEEEcCCCCcHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHhCCEEccccCHHHeeEC---CCCCEEEeeCCCc
Confidence            356899999999999999665  679999999999999999999997 5999999999999998   5789999999999


Q ss_pred             eeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHH-----------------
Q 014171          117 DFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKE-----------------  178 (429)
Q Consensus       117 ~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~-----------------  178 (429)
                      +..... ...+.+||+.|+|||++.+ .++.++||||+||++|+|++|+.||.+.+.......                 
T Consensus       153 ~~~~~~-~~~~~~GT~~Y~APEvl~~~~y~~~~DiWSlGvil~ell~G~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (322)
T d1s9ja_         153 GQLIDS-MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETPPRPR  231 (322)
T ss_dssp             HHHHHH-TC---CCSSCCCCHHHHHCSCCCTTHHHHHHHHHHHHHHHSSCCSSCCCTTHHHHHC----------------
T ss_pred             cccCCC-ccccccCCccccCchHHcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhcCCcccCCcccc
Confidence            866432 2345689999999999975 579999999999999999999999987654322110                 


Q ss_pred             -------------------------HHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          179 -------------------------VLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       179 -------------------------i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                                               +....+  +..+...+|.++++||.+||+.||.+|||++|+|+||||++.
T Consensus       232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~L~Hpf~~~~  304 (322)
T d1s9ja_         232 TPGRPLSSYGMDSRPPMAIFELLDYIVNEPP--PKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFIKRS  304 (322)
T ss_dssp             --------------CCCCHHHHHHHHHTSCC--CCCCBTTBCHHHHHHHHHHTCSSTTTSCCHHHHHTSHHHHHH
T ss_pred             cccccccccccccccchhHHHHHhhhhccCC--ccCccccCCHHHHHHHHHHcCCChhHCcCHHHHhhCHhhCcC
Confidence                                     000000  011112357899999999999999999999999999999864

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=9.9e-43  Score=333.48  Aligned_cols=184  Identities=25%  Similarity=0.372  Sum_probs=156.3

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||+||+|.+++.+.  ..+++..++.++.||+.||.|||++||+||||||+|||++   ..+.+||+|||+|+
T Consensus        81 ~~~ivmE~~~gg~L~~~l~~~--~~~~e~~~~~~~~qi~~aL~ylH~~~iiHrDlKP~NILl~---~~g~iKl~DFGla~  155 (364)
T d1omwa3          81 KLSFILDLMNGGDLHYHLSQH--GVFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLD---EHGHVRISDLGLAC  155 (364)
T ss_dssp             EEEEEECCCCSCBHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---SSSCEEECCCTTCE
T ss_pred             EEEEEEEecCCCcHHHHHHhc--ccccHHHHHHHHHHHHHHHHHHHHCCccceeeccceeEEc---CCCcEEEeeeceee
Confidence            357899999999999999665  6899999999999999999999999999999999999998   57899999999998


Q ss_pred             eccCCCcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCC
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSIS  195 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~  195 (429)
                      ...... ....+||+.|+|||++.+  .++.++||||+||++|+|+||+.||.+.+...... +.......+...+..+|
T Consensus       156 ~~~~~~-~~~~~GT~~y~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~-~~~~~~~~~~~~~~~~s  233 (364)
T d1omwa3         156 DFSKKK-PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE-IDRMTLTMAVELPDSFS  233 (364)
T ss_dssp             ECSSSC-CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCSSCHHH-HHHHSSSCCCCCCSSSC
T ss_pred             ecCCCc-ccccccccccchhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCHHHHHH-HHHhcccCCCCCCCCCC
Confidence            776543 345689999999999863  46899999999999999999999998766544433 22222233334445789


Q ss_pred             HHHHHHHHHhccCCccCcCC-----HHHHhCCCccccC
Q 014171          196 NSAKDFVKKLLVKDPRARLT-----AAQALSHPWVREG  228 (429)
Q Consensus       196 ~~~~~li~~~l~~dp~~R~s-----~~e~l~h~~~~~~  228 (429)
                      +++++||.+||+.||.+|||     ++++++||||+..
T Consensus       234 ~~~~~li~~~L~~dP~~R~t~~~~~a~eil~Hp~f~~i  271 (364)
T d1omwa3         234 PELRSLLEGLLQRDVNRRLGCLGRGAQEVKESPFFRSL  271 (364)
T ss_dssp             HHHHHHHHHHTCSSTTTSTTTSSSTHHHHHTSGGGTTC
T ss_pred             HHHHHHHHHHcccCHHHhCCCcccCHHHHHcCccccCC
Confidence            99999999999999999999     7999999999874

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.8e-43  Score=330.01  Aligned_cols=200  Identities=27%  Similarity=0.447  Sum_probs=171.6

Q ss_pred             ccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCC
Q 014171            8 DTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGL   87 (429)
Q Consensus         8 ~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i   87 (429)
                      ..+|||++++++++..            ....|+|||||+||+|.+++...  +.+++.+++.++.||+.||+|||++||
T Consensus        59 ~~~hp~Iv~~~~~~~~------------~~~~yivmEy~~~g~L~~~i~~~--~~~~e~~~~~~~~qi~~al~ylH~~~i  124 (320)
T d1xjda_          59 AWEHPFLTHMFCTFQT------------KENLFFVMEYLNGGDLMYHIQSC--HKFDLSRATFYAAEIILGLQFLHSKGI  124 (320)
T ss_dssp             HTTCTTBCCEEEEEEC------------SSEEEEEEECCTTCBHHHHHHHH--SSCCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred             hCCCCcEEEEEEEEcc------------CCceeEEEeecCCCcHHHHhhcc--CCCCHHHHHHHHHHHHHHHHHHHhCCe
Confidence            4556666665554443            23346899999999999999665  689999999999999999999999999


Q ss_pred             eecCCCCCcEEEeecCCCCCEEEeecccceeccCC-CcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCC
Q 014171           88 VHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPG-KKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRR  165 (429)
Q Consensus        88 ~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~-~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~  165 (429)
                      +||||||+|||++   ..+.+||+|||+|+..... .......||+.|+|||++.+ .++.++||||+||++|+|++|+.
T Consensus       125 iHrDikp~NiL~~---~~~~~kl~DFG~a~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvilyemltG~~  201 (320)
T d1xjda_         125 VYRDLKLDNILLD---KDGHIKIADFGMCKENMLGDAKTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQS  201 (320)
T ss_dssp             BCCCCCGGGEEEC---TTSCEEECCCTTCBCCCCTTCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSC
T ss_pred             eeccCcccceeec---CCCceeccccchhhhcccccccccccCCCCCcCCHHHHcCCCCCchhhhhhhhHHHHHHHhCCC
Confidence            9999999999998   5789999999999866533 33455689999999999975 56899999999999999999999


Q ss_pred             CCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHH-HHhCCCccccC
Q 014171          166 PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAA-QALSHPWVREG  228 (429)
Q Consensus       166 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~-e~l~h~~~~~~  228 (429)
                      ||.+.+......++..+.+.++    +.+|+++++||.+||+.||.+|||+. ++++||||+..
T Consensus       202 PF~~~~~~~~~~~i~~~~~~~p----~~~s~~~~dli~~~L~~dP~~R~s~~~~l~~hpff~~~  261 (320)
T d1xjda_         202 PFHGQDEEELFHSIRMDNPFYP----RWLEKEAKDLLVKLFVREPEKRLGVRGDIRQHPLFREI  261 (320)
T ss_dssp             SSCCSSHHHHHHHHHHCCCCCC----TTSCHHHHHHHHHHSCSSGGGSBTTBSCGGGSGGGTTC
T ss_pred             CCCCCCHHHHHHHHHcCCCCCC----ccCCHHHHHHHHHhcccCCCCCcCHHHHHHhCchhccC
Confidence            9999999999999888776554    36899999999999999999999995 89999999864

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2e-42  Score=329.55  Aligned_cols=180  Identities=26%  Similarity=0.474  Sum_probs=161.9

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||+|..++.+.  +.+++..++.++.||+.||.|||++||+||||||+|||++   .++.+||+|||+|+
T Consensus       115 ~~~~v~e~~~~g~l~~~l~~~--~~l~e~~~~~i~~qi~~aL~yLH~~~iiHRDIKP~NILl~---~~g~ikL~DFG~a~  189 (350)
T d1rdqe_         115 NLYMVMEYVAGGEMFSHLRRI--GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLID---QQGYIQVTDFGFAK  189 (350)
T ss_dssp             EEEEEEECCTTCBHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTSCEEECCCTTCE
T ss_pred             ccccccccccccchhhhHhhc--CCCCHHHHHHHHHHHHHHHHHHHhCCEecCcCCHHHcccC---CCCCEEeeeceeee
Confidence            346899999999999999766  6899999999999999999999999999999999999998   57899999999998


Q ss_pred             eccCCCcccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCH
Q 014171          118 FIKPGKKFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISN  196 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~  196 (429)
                      .+...  .....||+.|+|||++.+. ++.++||||+||++|+|+||+.||.+.+.......+..+.+.++    +.+++
T Consensus       190 ~~~~~--~~~~~Gt~~Y~APE~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~~~p----~~~s~  263 (350)
T d1rdqe_         190 RVKGR--TWTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFP----SHFSS  263 (350)
T ss_dssp             ECSSC--BCCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCCCC----TTCCH
T ss_pred             ecccc--cccccCccccCCHHHHcCCCCCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCCCCC----ccCCH
Confidence            87543  3457899999999999764 68999999999999999999999999999898999988876554    46899


Q ss_pred             HHHHHHHHhccCCccCcC-----CHHHHhCCCccccC
Q 014171          197 SAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG  228 (429)
Q Consensus       197 ~~~~li~~~l~~dp~~R~-----s~~e~l~h~~~~~~  228 (429)
                      ++.+||.+||+.||.+|+     |++++++||||+..
T Consensus       264 ~~~~li~~~L~~dP~kR~~~~r~t~~ell~Hp~f~~~  300 (350)
T d1rdqe_         264 DLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATT  300 (350)
T ss_dssp             HHHHHHHHHSCSCTTTCTTSSTTTTHHHHTSGGGTTC
T ss_pred             HHHHHHHHHhhhCHHhccccccccHHHHHcCccccCC
Confidence            999999999999999995     89999999999875

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-42  Score=324.28  Aligned_cols=188  Identities=22%  Similarity=0.297  Sum_probs=156.6

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||.||++....  ..+..+++..++.++.||+.||+|||++||+||||||+|||++   ..+.+||+|||+|+
T Consensus        74 ~~~ivmE~~~~~~~~~~~--~~~~~l~~~~~~~~~~qil~aL~~lH~~~iiHrDiKp~NIli~---~~~~~KL~DFG~a~  148 (299)
T d1ua2a_          74 NISLVFDFMETDLEVIIK--DNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLD---ENGVLKLADFGLAK  148 (299)
T ss_dssp             CCEEEEECCSEEHHHHHT--TCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTCCEEECCCGGGS
T ss_pred             ceeehhhhhcchHHhhhh--hcccCCCHHHHHHHHHHHHHHHHHhhccceecccCCcceEEec---CCCccccccCcccc
Confidence            356899999988776554  4457899999999999999999999999999999999999998   57899999999998


Q ss_pred             eccCCC-cccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCC-----
Q 014171          118 FIKPGK-KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK-----  189 (429)
Q Consensus       118 ~~~~~~-~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~-----  189 (429)
                      ...... .....+||+.|+|||++.+  .++.++||||+||++|+|++|.+||.+.+..+.+..+..........     
T Consensus       149 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~~~  228 (299)
T d1ua2a_         149 SFGSPNRAYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWPDM  228 (299)
T ss_dssp             TTTSCCCCCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSSST
T ss_pred             ccCCCcccccceecChhhccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhccch
Confidence            765433 3345689999999999853  45889999999999999999999999999888877766431111110     


Q ss_pred             -------------------CCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          190 -------------------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       190 -------------------~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                                         .++.+++++++||.+||+.||.+|||++|+|+||||++...
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~dP~~R~sa~e~L~Hp~f~~~p~  288 (299)
T d1ua2a_         229 CSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCARITATQALKMKYFSNRPG  288 (299)
T ss_dssp             TSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTSCCHHHHHTSGGGTSSSC
T ss_pred             hccchhhhhccCCCCChHHhcccCCHHHHHHHHHHccCChhhCcCHHHHhCCHhhCCCCC
Confidence                               02356889999999999999999999999999999997654

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7e-42  Score=315.42  Aligned_cols=181  Identities=23%  Similarity=0.365  Sum_probs=147.0

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..|+|||||+||+|.+++... ++.+++..+..++.||+.||+|||++||+||||||+|||++   .++.+||+|||+|+
T Consensus        77 ~~~lv~Ey~~~g~L~~~l~~~-~~~~~~~~~~~i~~qi~~gl~yLH~~~ivHrDlKp~NiLl~---~~~~~Kl~DFGla~  152 (276)
T d1uwha_          77 QLAIVTQWCEGSSLYHHLHII-ETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFLH---EDLTVKIGDFGLAT  152 (276)
T ss_dssp             SCEEEEECCCEEEHHHHHHTS-CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEE---TTSSEEECCCCCSC
T ss_pred             EEEEEEecCCCCCHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHhcCCEeccccCHHHEEEc---CCCCEEEcccccee
Confidence            357899999999999998654 36799999999999999999999999999999999999998   57899999999997


Q ss_pred             eccCC---CcccccccCCcccccccccC----CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCC--C
Q 014171          118 FIKPG---KKFQDIVGSAYYVAPEVLKR----KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFR--R  188 (429)
Q Consensus       118 ~~~~~---~~~~~~~g~~~y~aPE~~~~----~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~--~  188 (429)
                      .....   .......||+.|+|||++.+    .++.++||||+||++|+|+||+.||.+.+.......+.......+  .
T Consensus       153 ~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~~~~~~p~~~  232 (276)
T d1uwha_         153 VKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLS  232 (276)
T ss_dssp             C------------CCCCGGGCCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHHTSCCCCGG
T ss_pred             eccccCCcccccccccCcccCCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCCcch
Confidence            66432   22345689999999999853    357899999999999999999999988776655544443332211  2


Q ss_pred             CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          189 KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       189 ~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      .....+++++++||.+||+.||.+|||+++++++
T Consensus       233 ~~~~~~~~~l~~li~~cl~~dp~~RPt~~~il~~  266 (276)
T d1uwha_         233 KVRSNCPKAMKRLMAECLKKKRDERPLFPQILAS  266 (276)
T ss_dssp             GSCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             hccccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            2345789999999999999999999999999865

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-41  Score=317.10  Aligned_cols=188  Identities=24%  Similarity=0.321  Sum_probs=158.0

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|||||.||.+.. ........+++..++.++.||+.||+|||++||+||||||+|||++   ..+.+||+|||.+..
T Consensus        90 ~~~~~e~~~~~~~~~-~~~~~~~~~~~~~~~~~~~qi~~aL~yLH~~~ivHrDiKp~NILi~---~~~~~kl~dfg~~~~  165 (305)
T d1blxa_          90 LTLVFEHVDQDLTTY-LDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVT---SSGQIKLADFGLARI  165 (305)
T ss_dssp             EEEEEECCSCBHHHH-HHHSCTTCSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTCCEEECSCCSCCC
T ss_pred             EEEEEEeccCCchhh-hhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEEecCCCccEEEEc---CCCCeeecchhhhhh
Confidence            468999999876654 3344557899999999999999999999999999999999999998   578999999999987


Q ss_pred             ccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCC-----------
Q 014171          119 IKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDF-----------  186 (429)
Q Consensus       119 ~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~-----------  186 (429)
                      ...........||+.|+|||++.+ .++.++||||+||++|+|++|++||.+.+.......+.......           
T Consensus       166 ~~~~~~~~~~~gT~~Y~APE~~~~~~y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~  245 (305)
T d1blxa_         166 YSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWPRDVAL  245 (305)
T ss_dssp             CCGGGGGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSCTTCSS
T ss_pred             hcccccCCCcccChhhcCcchhcCCCCChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhcccccccc
Confidence            665556667889999999998864 57999999999999999999999999998888777665421110           


Q ss_pred             ------------CCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCC
Q 014171          187 ------------RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       187 ------------~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~  230 (429)
                                  ....++.+++.+++||.+||+.||.+|||++|+|+||||++..+
T Consensus       246 ~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~sa~e~L~Hpff~~i~~  301 (305)
T d1blxa_         246 PRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQDLER  301 (305)
T ss_dssp             CGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTCCC
T ss_pred             hhhhhccccccchhhccccCCHHHHHHHHHHCcCChhHCcCHHHHhcChhhcCchh
Confidence                        01123457899999999999999999999999999999998643

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.1e-40  Score=311.61  Aligned_cols=191  Identities=24%  Similarity=0.375  Sum_probs=156.1

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|||||.| ++.+++.......+++..++.++.||+.||+|||++||+||||||+|||++   .++.+||+|||.|
T Consensus        74 ~~~~iv~e~~~~-~~~~~~~~~~~~~l~e~~~~~~~~qil~~L~yLH~~~IiHrDiKpeNIl~~---~~~~~kl~DFG~a  149 (298)
T d1gz8a_          74 NKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLIN---TEGAIKLADFGLA  149 (298)
T ss_dssp             TEEEEEEECCSE-EHHHHHHHTTTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSCEEECSTTHH
T ss_pred             cceeEEEeecCC-chhhhhhhhcccCCCHHHHHHHHHHHHHHHHHhhcCCEEccccCchheeec---ccCcceeccCCcc
Confidence            345789999975 555666555567899999999999999999999999999999999999998   5789999999999


Q ss_pred             eeccCC-CcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCC----
Q 014171          117 DFIKPG-KKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRK----  189 (429)
Q Consensus       117 ~~~~~~-~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~----  189 (429)
                      +..... .......||+.|+|||++..  .++.++|+||+||++|+|++|+.||.+.+.......+..........    
T Consensus       150 ~~~~~~~~~~~~~~gt~~y~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~  229 (298)
T d1gz8a_         150 RAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPG  229 (298)
T ss_dssp             HHHCCCSBCTTCCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTT
T ss_pred             eeccCCcccceeecccceeeehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhccc
Confidence            876543 33455689999999998754  34789999999999999999999999888777766654422111111    


Q ss_pred             ---------------------CCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCC
Q 014171          190 ---------------------PWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA  231 (429)
Q Consensus       190 ---------------------~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~  231 (429)
                                           ..+.+++++++||.+||+.||.+|||++|+++||||++...+
T Consensus       230 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~t~~ell~H~ff~~~~~p  292 (298)
T d1gz8a_         230 VTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQDVTKP  292 (298)
T ss_dssp             GGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGTTCCCC
T ss_pred             cccccccccccccccccchhhhccCCCHHHHHHHHHHccCChhHCcCHHHHhCCHhhccCCCC
Confidence                                 123567899999999999999999999999999999886543

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-41  Score=317.39  Aligned_cols=196  Identities=21%  Similarity=0.255  Sum_probs=160.8

Q ss_pred             ccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcC---------------------CCCCHHHH
Q 014171           10 RSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKD---------------------SRYTEKDA   68 (429)
Q Consensus        10 ~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~---------------------~~l~~~~~   68 (429)
                      +|+|++++++.+..            +...|+|||||+||+|.+++..++.                     ..+++..+
T Consensus        99 ~HpnIv~l~~~~~~------------~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  166 (325)
T d1rjba_          99 SHENIVNLLGACTL------------SGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDL  166 (325)
T ss_dssp             CCTTBCCEEEEECS------------SSSCEEEEECCTTCBHHHHHHTTTTCC---------------------CCHHHH
T ss_pred             CCCcEeEEEEEEee------------CCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccccccccccCCCCHHHH
Confidence            56666555554432            3345789999999999999976532                     35899999


Q ss_pred             HHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc---ccccccCCccccccccc-CCC
Q 014171           69 AVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKS  144 (429)
Q Consensus        69 ~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~~~-~~~  144 (429)
                      ..++.||+.||.|||++||+||||||+||+++   .++.+||+|||+|+.......   ..+..||+.|+|||++. +.+
T Consensus       167 ~~i~~qi~~gl~yLH~~~IiHRDlKp~Nill~---~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~  243 (325)
T d1rjba_         167 LCFAYQVAKGMEFLEFKSCVHRDLAARNVLVT---HGKVVKICDFGLARDIMSDSNYVVRGNARLPVKWMAPESLFEGIY  243 (325)
T ss_dssp             HHHHHHHHHHHHHHHHTTEEETTCSGGGEEEE---TTTEEEECCCGGGSCGGGCTTSEEETTEEECGGGCCHHHHHHCCC
T ss_pred             HHHHHHHHHHHHHHHhCCeeeccCchhccccc---cCCeEEEeeccccccccCCCceeeeccccCCCccCChHHHcCCCC
Confidence            99999999999999999999999999999998   578999999999987654432   23456899999999886 567


Q ss_pred             CCCcchHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          145 GPESDVWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       145 ~~~~DiwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      +.++||||+||++|+|+| |.+||.+.+....+..+......++  .+..+|+++++||.+||+.||++|||++|+++|
T Consensus       244 ~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~~--~p~~~~~~l~~li~~cl~~dP~~RPt~~ei~~~  320 (325)
T d1rjba_         244 TIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMD--QPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF  320 (325)
T ss_dssp             CHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CcceeccchhHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCC--CCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            999999999999999998 8999998877777777766654433  335689999999999999999999999999865

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-41  Score=312.10  Aligned_cols=198  Identities=18%  Similarity=0.247  Sum_probs=161.0

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG   86 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~   86 (429)
                      ..++|+|++++++++..             ...|+|||||+||+|.+++.+.  ..+++..+..++.||+.||+|||++|
T Consensus        63 ~~l~HpnIv~~~g~~~~-------------~~~~lvmE~~~~g~L~~~l~~~--~~l~~~~~~~i~~qi~~gl~ylH~~~  127 (277)
T d1xbba_          63 QQLDNPYIVRMIGICEA-------------ESWMLVMEMAELGPLNKYLQQN--RHVKDKNIIELVHQVSMGMKYLEESN  127 (277)
T ss_dssp             HTCCCTTBCCEEEEEES-------------SSEEEEEECCTTEEHHHHHHHC--TTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HhCCCCCCceEEEEecc-------------CCEEEEEEcCCCCcHHHHHhhc--cCCCHHHHHHHHHHHHHHHhhHHhCC
Confidence            45566666666554421             2346899999999999998654  67999999999999999999999999


Q ss_pred             CeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcc----cccccCCccccccccc-CCCCCCcchHHHHHHHHHHh
Q 014171           87 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF----QDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILL  161 (429)
Q Consensus        87 i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~----~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~  161 (429)
                      |+||||||+|||++   .++.+||+|||+|+........    ....||+.|+|||++. +.++.++||||+||++|+|+
T Consensus       128 iiHrDlKp~Nill~---~~~~~kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gv~l~ell  204 (277)
T d1xbba_         128 FVHRDLAARNVLLV---TQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAF  204 (277)
T ss_dssp             EECSCCSGGGEEEE---ETTEEEECCCTTCEECCTTCSEEEC----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHH
T ss_pred             cccCCCcchhhccc---ccCcccccchhhhhhccccccccccccccCCCceecCchhhcCCCCCchhhhccchhhhhHHh
Confidence            99999999999999   4789999999999876544322    2346889999999986 45688999999999999999


Q ss_pred             h-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHh---CCCcc
Q 014171          162 C-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL---SHPWV  225 (429)
Q Consensus       162 ~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l---~h~~~  225 (429)
                      | |+.||.+.+..+....+..+...   +.++.+|+++++||.+||+.||.+|||+++++   +|+|+
T Consensus       205 t~g~~Pf~~~~~~~~~~~i~~~~~~---~~p~~~~~~~~~li~~cl~~dp~~RPs~~~i~~~L~~~~~  269 (277)
T d1xbba_         205 SYGQKPYRGMKGSEVTAMLEKGERM---GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNYYY  269 (277)
T ss_dssp             TTTCCSSTTCCHHHHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHHH
T ss_pred             hCCCCCCCCCCHHHHHHHHHcCCCC---CCCcccCHHHHHHHHHHcCCCHhHCcCHHHHHHHhhCHHh
Confidence            8 89999998888887777765422   22356899999999999999999999999884   55554

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.3e-40  Score=316.28  Aligned_cols=216  Identities=23%  Similarity=0.289  Sum_probs=167.5

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHH-hhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRIL-AKKDSRYTEKDAAVVVRQMLRVAAECHLH   85 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~-~~~~~~l~~~~~~~i~~qil~aL~~lH~~   85 (429)
                      +.++|+|++.+.+++..........++      |+|||||.+|.+..... ......+++.+++.++.||+.||+|||++
T Consensus        68 ~~l~h~niv~~~~~~~~~~~~~~~~~~------~lv~Ey~~~~~~~~l~~~~~~~~~l~~~~~~~i~~qil~aL~yLH~~  141 (350)
T d1q5ka_          68 RKLDHCNIVRLRYFFYSSGEKKDEVYL------NLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSF  141 (350)
T ss_dssp             HHCCCTTBCCEEEEEEEC--CCSCCEE------EEEEECCSEEHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HhcCCCCCCcEEEEEEecCccCCceEE------EEEEeccCCccHHHHHhhhhccCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence            455677776666665443333333333      47999998664333322 23446799999999999999999999999


Q ss_pred             CCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhC
Q 014171           86 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCG  163 (429)
Q Consensus        86 ~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g  163 (429)
                      ||+||||||+|||++.  +...+||+|||+|..........+.+|++.|+|||.+.+  .++.++||||+||++|+|++|
T Consensus       142 ~IiHrDiKp~NILl~~--~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DIwSlG~il~el~~g  219 (350)
T d1q5ka_         142 GICHRDIKPQNLLLDP--DTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLG  219 (350)
T ss_dssp             TEECCCCCGGGEEECT--TTCCEEECCCTTCEECCTTSCCCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHT
T ss_pred             CCcccCCCcceEEEec--CCCceeEecccchhhccCCcccccccccccccChHHhhcccCCCcceeecccceEEEehhhC
Confidence            9999999999999984  345899999999998876666677889999999998753  568999999999999999999


Q ss_pred             CCCCCCCChhHHHHHHHhcC-----------------CCCCC--------CCCCCCCHHHHHHHHHhccCCccCcCCHHH
Q 014171          164 RRPFWDKTEDGIFKEVLRNK-----------------PDFRR--------KPWPSISNSAKDFVKKLLVKDPRARLTAAQ  218 (429)
Q Consensus       164 ~~pf~~~~~~~~~~~i~~~~-----------------~~~~~--------~~~~~~~~~~~~li~~~l~~dp~~R~s~~e  218 (429)
                      ++||.+.+..+.+..+....                 ..++.        ...+.+++++.+||.+||+.||.+|||+.|
T Consensus       220 ~~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~ta~e  299 (350)
T d1q5ka_         220 QPIFPGDSGVDQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE  299 (350)
T ss_dssp             SCSSCCSSHHHHHHHHHHHHCCCCHHHHHHHCC---CCCCCCCCCCCGGGTSCTTSCHHHHHHHHHHSCSSGGGSCCHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHhCCChHHhhhhhccchhhccccccccCchhhhcccCCCHHHHHHHHHHccCChhHCcCHHH
Confidence            99999888777666554310                 01110        112457899999999999999999999999


Q ss_pred             HhCCCccccCCC
Q 014171          219 ALSHPWVREGGD  230 (429)
Q Consensus       219 ~l~h~~~~~~~~  230 (429)
                      +|+||||++...
T Consensus       300 ~L~Hp~f~~~~~  311 (350)
T d1q5ka_         300 ACAHSFFDELRD  311 (350)
T ss_dssp             HHTSGGGGGGGC
T ss_pred             HhcCHhhccccC
Confidence            999999987643

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.1e-41  Score=308.68  Aligned_cols=177  Identities=29%  Similarity=0.531  Sum_probs=149.5

Q ss_pred             ccceeEeeecCC-CChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           37 LRKLRRIRLCEG-GELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        37 ~~~~lv~e~~~g-g~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      ...|+|||||.+ +++.+++.+.  +.+++.+++.++.||+.||.|||++||+||||||+||+++.  +.+.+||+|||+
T Consensus        82 ~~~~lv~e~~~~~~~l~~~~~~~--~~l~e~~~~~~~~qi~~al~~lH~~~iiHrDiKp~NIll~~--~~~~vkl~DFG~  157 (273)
T d1xwsa_          82 DSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL--NRGELKLIDFGS  157 (273)
T ss_dssp             SEEEEEEECCSSEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEET--TTTEEEECCCTT
T ss_pred             CeEEEEEEeccCcchHHHHHhcc--CCCCHHHHHHHHHHHHHHHHHHHHCCCccccCcccceEEec--CCCeEEECcccc
Confidence            445789999986 5777777554  68999999999999999999999999999999999999984  357899999999


Q ss_pred             ceeccCCCcccccccCCcccccccccCC--CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          116 SDFIKPGKKFQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       116 a~~~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      |...... ...+..||+.|+|||++.+.  ++.++||||+||++|+|++|+.||.+.      ..+..+...++    +.
T Consensus       158 a~~~~~~-~~~~~~GT~~y~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~------~~i~~~~~~~~----~~  226 (273)
T d1xwsa_         158 GALLKDT-VYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD------EEIIRGQVFFR----QR  226 (273)
T ss_dssp             CEECCSS-CBCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH------HHHHHCCCCCS----SC
T ss_pred             ceecccc-cccccccCCCcCCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCc------hHHhhcccCCC----CC
Confidence            9865443 34567899999999998643  366799999999999999999999653      23445544443    46


Q ss_pred             CCHHHHHHHHHhccCCccCcCCHHHHhCCCccccC
Q 014171          194 ISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      +|+++++||.+||+.||.+|||++|+++||||++.
T Consensus       227 ~s~~~~~li~~~L~~dp~~R~s~~eil~hp~~~~~  261 (273)
T d1xwsa_         227 VSSECQHLIRWCLALRPSDRPTFEEIQNHPWMQDV  261 (273)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGSSC
T ss_pred             CCHHHHHHHHHHccCCHhHCcCHHHHhcCHhhCCC
Confidence            89999999999999999999999999999999875

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-41  Score=311.95  Aligned_cols=200  Identities=18%  Similarity=0.239  Sum_probs=164.8

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG   86 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~   86 (429)
                      ..++|+|++++++++..             ...|+|||||+||+|.+++... ...+++..+..++.||+.||.|||++|
T Consensus        64 ~~l~HpnIv~l~g~~~~-------------~~~~lvmE~~~~g~L~~~l~~~-~~~l~~~~~~~i~~qi~~gL~ylH~~~  129 (285)
T d1u59a_          64 HQLDNPYIVRLIGVCQA-------------EALMLVMEMAGGGPLHKFLVGK-REEIPVSNVAELLHQVSMGMKYLEEKN  129 (285)
T ss_dssp             HHCCCTTBCCEEEEEES-------------SSEEEEEECCTTEEHHHHHTTC-TTTSCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HhCCCCCEeeEeeeecc-------------CeEEEEEEeCCCCcHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHHhCC
Confidence            45667777766665432             1346899999999999987443 367999999999999999999999999


Q ss_pred             CeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc----ccccccCCccccccccc-CCCCCCcchHHHHHHHHHHh
Q 014171           87 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILL  161 (429)
Q Consensus        87 i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~----~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~  161 (429)
                      |+||||||+||+++   .++.+||+|||+|+.+.....    .....||+.|+|||++. +.++.++||||+||++|||+
T Consensus       130 iiHrDlKp~Nill~---~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDVwS~Gv~l~E~l  206 (285)
T d1u59a_         130 FVHRDLAARNVLLV---NRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEAL  206 (285)
T ss_dssp             EECCCCSGGGEEEE---ETTEEEECCCTTCEECTTCSCEECCCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHH
T ss_pred             eecCcCchhheeec---cCCceeeccchhhhcccccccccccccccccCccccChHHHhCCCCCccchhhcchHHHHHHH
Confidence            99999999999999   478999999999987754332    23446889999999986 45689999999999999999


Q ss_pred             h-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHH---hCCCccc
Q 014171          162 C-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQA---LSHPWVR  226 (429)
Q Consensus       162 ~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~---l~h~~~~  226 (429)
                      | |+.||.+.+..+....+..+...   +.++.+|+++.+||.+||+.||.+|||+.++   |+|+|+.
T Consensus       207 t~G~~Pf~~~~~~~~~~~i~~~~~~---~~p~~~~~~l~~li~~cl~~~p~~RPs~~~i~~~L~~~~~~  272 (285)
T d1u59a_         207 SYGQKPYKKMKGPEVMAFIEQGKRM---ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYS  272 (285)
T ss_dssp             TTSCCTTTTCCTHHHHHHHHTTCCC---CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             hCCCCCCCCCCHHHHHHHHHcCCCC---CCCCcCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHHHH
Confidence            8 99999998888888777766532   2335789999999999999999999999877   5677764

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=2.2e-40  Score=309.03  Aligned_cols=198  Identities=23%  Similarity=0.355  Sum_probs=153.3

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH   85 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~   85 (429)
                      ++.++|+|++++++++..            +...|+|||||+||+|.+++... .+.+++.++..++.||+.||.|||++
T Consensus        81 l~~l~HpnIv~l~g~~~~------------~~~~~iv~Ey~~~g~L~~~~~~~-~~~l~~~~~~~i~~qia~gl~yLH~~  147 (299)
T d1jpaa_          81 MGQFDHPNVIHLEGVVTK------------STPVMIITEFMENGSLDSFLRQN-DGQFTVIQLVGMLRGIAAGMKYLADM  147 (299)
T ss_dssp             HTTCCCTTBCCEEEEECS------------SSSCEEEEECCTTEEHHHHHHTT-TTCSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHhCCCCCCccEEEEEee------------CCEEEEEEEecCCCcceeeeccc-cCCCCHHHHHHHHHHHHHHHHHHhhC
Confidence            345666776666665432            23457899999999999988654 35799999999999999999999999


Q ss_pred             CCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcc------cccccCCccccccccc-CCCCCCcchHHHHHHHH
Q 014171           86 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKF------QDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITY  158 (429)
Q Consensus        86 ~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~------~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~  158 (429)
                      ||+||||||+|||++   .++.+||+|||+|+........      ....||+.|+|||.+. +.++.++||||+||++|
T Consensus       148 ~iiHrDlKp~NILl~---~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDvwS~Gvvl~  224 (299)
T d1jpaa_         148 NYVHRDLAARNILVN---SNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMW  224 (299)
T ss_dssp             TCCCSCCCGGGEEEC---TTCCEEECCC-----------------------CGGGSCHHHHHSCCCCHHHHHHHHHHHHH
T ss_pred             CCccCccccceEEEC---CCCcEEECCcccceEccCCCCcceeeecccccCCccccCHHHHhcCCCCcccccccchHHHH
Confidence            999999999999998   5789999999999876543221      1235788999999986 45688999999999999


Q ss_pred             HHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          159 ILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       159 ~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      ||+| |+.||.+.+..+....+..+..   .+.+..+++.+++||.+||+.||.+|||+.+++++
T Consensus       225 el~t~g~~Pf~~~~~~~~~~~i~~~~~---~~~~~~~~~~l~~li~~cl~~~P~~RPs~~ei~~~  286 (299)
T d1jpaa_         225 EVMSYGERPYWDMTNQDVINAIEQDYR---LPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNT  286 (299)
T ss_dssp             HHHTTSCCTTTTCCHHHHHHHHHTTCC---CCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHH
T ss_pred             HHHhCCCCCCCCCCHHHHHHHHHcCCC---CCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            9998 8999999998888887776542   22335689999999999999999999999998753

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.8e-41  Score=308.97  Aligned_cols=203  Identities=19%  Similarity=0.227  Sum_probs=164.3

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH   85 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~   85 (429)
                      +..++|+|++++++++.             ....|+|||||++|+|.+++.......+++..+..++.||+.||.|||++
T Consensus        62 l~~l~HpnIv~~~g~~~-------------~~~~~iv~Ey~~~g~L~~~~~~~~~~~l~~~~~~~i~~qi~~gl~~lH~~  128 (272)
T d1qpca_          62 MKQLQHQRLVRLYAVVT-------------QEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEER  128 (272)
T ss_dssp             HHHCCCTTBCCEEEEEC-------------SSSCEEEEECCTTCBHHHHTTSHHHHTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHhCCCCCEeEEEeeec-------------cCCeEEEEEeCCCCcHHHHHhhcCCCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence            34556666666665432             12346899999999999988666555799999999999999999999999


Q ss_pred             CCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc--ccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh
Q 014171           86 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC  162 (429)
Q Consensus        86 ~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~--~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~  162 (429)
                      ||+||||||+|||++   .++.+||+|||+|+.......  .....||+.|+|||++. +.++.++||||+||++|+|+|
T Consensus       129 ~ivHrDiKp~NIll~---~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS~Gvvl~ellt  205 (272)
T d1qpca_         129 NYIHRDLRAANILVS---DTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT  205 (272)
T ss_dssp             TEECSCCSGGGEEEC---TTSCEEECCCTTCEECSSSCEECCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHT
T ss_pred             CcccCccchhheeee---cccceeeccccceEEccCCccccccccCCcccccChHHHhCCCCCchhhhhhhHHHHHHHHh
Confidence            999999999999999   578999999999987754432  23457889999999987 456899999999999999999


Q ss_pred             C-CCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC--CCcccc
Q 014171          163 G-RRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS--HPWVRE  227 (429)
Q Consensus       163 g-~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~--h~~~~~  227 (429)
                      | .+|+...+..+....+..+...   ..+..+++++++||.+||+.||.+|||++++++  ++||..
T Consensus       206 ~~~~~~~~~~~~~~~~~i~~~~~~---~~p~~~~~~l~~li~~cl~~~P~~Rpt~~ei~~~L~~~fts  270 (272)
T d1qpca_         206 HGRIPYPGMTNPEVIQNLERGYRM---VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFFTA  270 (272)
T ss_dssp             TTCCSSTTCCHHHHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHhcCCC---CCcccChHHHHHHHHHHcCCCHhHCcCHHHHHHHhhhhhhc
Confidence            5 5556666666777777665432   223568999999999999999999999999987  778754

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=1.1e-40  Score=308.28  Aligned_cols=182  Identities=27%  Similarity=0.436  Sum_probs=151.3

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|||||+||+|.+++...  +.+++.+++.++.||+.||+|||++||+||||||+||+++   ..+.++++|||.+..
T Consensus        86 ~~lvmE~~~g~~L~~~~~~~--~~l~~~~~~~i~~qi~~al~~lH~~~iiHrDiKP~NIll~---~~~~~~l~d~~~~~~  160 (277)
T d1o6ya_          86 PYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMIS---ATNAVKVMDFGIARA  160 (277)
T ss_dssp             EEEEEECCCEEEHHHHHHHH--CSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE---TTSCEEECCCTTCEE
T ss_pred             EEEEEECCCCCEehhhhccc--CCCCHHHHHHHHHHHHHHHHHHHhCCccCccccCcccccC---ccccceeehhhhhhh
Confidence            46899999999999988665  6899999999999999999999999999999999999999   578899999998875


Q ss_pred             ccCCC----cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCC
Q 014171          119 IKPGK----KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS  193 (429)
Q Consensus       119 ~~~~~----~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  193 (429)
                      .....    .....+||+.|+|||++.+ .+++++||||+||++|+|+||++||.+.+..+....+....+..+...++.
T Consensus       161 ~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~  240 (277)
T d1o6ya_         161 IADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPIPPSARHEG  240 (277)
T ss_dssp             CC----------------TTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCCCGGGTSSS
T ss_pred             hccccccccccccccCcccccCHHHHcCCCCCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCCCCchhccC
Confidence            53322    3345689999999999975 468899999999999999999999999998888888888877666666778


Q ss_pred             CCHHHHHHHHHhccCCccCcC-CHHHHhCCCccc
Q 014171          194 ISNSAKDFVKKLLVKDPRARL-TAAQALSHPWVR  226 (429)
Q Consensus       194 ~~~~~~~li~~~l~~dp~~R~-s~~e~l~h~~~~  226 (429)
                      +|++++++|.+||+.||.+|| |+++ +.|+|.+
T Consensus       241 ~s~~l~~li~~~L~~dp~~R~~sa~~-l~~~l~r  273 (277)
T d1o6ya_         241 LSADLDAVVLKALAKNPENRYQTAAE-MRADLVR  273 (277)
T ss_dssp             CCHHHHHHHHHHTCSSGGGSCSSHHH-HHHHHHH
T ss_pred             CCHHHHHHHHHHccCCHhHCHhHHHH-HHHHHHH
Confidence            999999999999999999999 5555 5566654

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=5.3e-40  Score=304.67  Aligned_cols=198  Identities=17%  Similarity=0.219  Sum_probs=157.7

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH   85 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~   85 (429)
                      ++.++|+|++++++.+..            ....|+|||||++|+|.+++.......+++..+..++.||+.||+|||++
T Consensus        67 l~~l~HpnIv~~~~~~~~------------~~~~~iv~E~~~~g~l~~~l~~~~~~~~~~~~~~~i~~qi~~gL~yLH~~  134 (287)
T d1opja_          67 MKEIKHPNLVQLLGVCTR------------EPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKK  134 (287)
T ss_dssp             HHHCCCTTBCCEEEEECS------------SSSCEEEEECCTTCBHHHHHHHSCTTTSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHhCCCCCEecCCccEee------------CCeeEEEeecccCcchHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHC
Confidence            344566666665554432            23456899999999999999877667899999999999999999999999


Q ss_pred             CCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc--ccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh
Q 014171           86 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC  162 (429)
Q Consensus        86 ~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~--~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~  162 (429)
                      ||+||||||+|||++   .++.+||+|||+|+.......  .....|++.|+|||++. +.++.++||||+||++|+|++
T Consensus       135 ~iiHrDlKp~NILl~---~~~~~Kl~DFG~a~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~k~DiwS~Gv~l~ell~  211 (287)
T d1opja_         135 NFIHRDLAARNCLVG---ENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT  211 (287)
T ss_dssp             TCCCSCCSGGGEEEC---GGGCEEECCCCCTTTCCSSSSEEETTEEECGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHT
T ss_pred             CcccCccccCeEEEC---CCCcEEEccccceeecCCCCceeeccccccccccChHHHcCCCCCchhhhhhHHHHHHHHHh
Confidence            999999999999998   478999999999987654332  23345789999999886 567899999999999999999


Q ss_pred             CCCCCCCC-ChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          163 GRRPFWDK-TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       163 g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      |..||... +.......+..+ ..  .+.++.+++++++||.+||+.||.+|||++++++
T Consensus       212 ~~~p~~~~~~~~~~~~~i~~~-~~--~~~~~~~~~~l~~li~~cl~~dP~~Rps~~ei~~  268 (287)
T d1opja_         212 YGMSPYPGIDLSQVYELLEKD-YR--MERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQ  268 (287)
T ss_dssp             TSCCSSTTCCHHHHHHHHHTT-CC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCCCcchHHHHHHHHhcC-CC--CCCCccchHHHHHHHHHHcCCCHhHCcCHHHHHH
Confidence            77666554 444444444433 22  2334578999999999999999999999999975

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-40  Score=301.22  Aligned_cols=198  Identities=16%  Similarity=0.273  Sum_probs=152.7

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH   85 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~   85 (429)
                      ++.++|+|++++++++..            +...|+|||||++|+|.+++... ...+++..+..++.||+.||.|||++
T Consensus        54 l~~l~HpnIv~~~g~~~~------------~~~~~lv~E~~~~g~L~~~l~~~-~~~~~~~~~~~i~~qia~gl~~lH~~  120 (263)
T d1sm2a_          54 MMKLSHPKLVQLYGVCLE------------QAPICLVFEFMEHGCLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEA  120 (263)
T ss_dssp             HHHCCCTTBCCEEEEECS------------SSSCEEEEECCTTCBHHHHHHTT-TTCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHhcCCCCcccccceecc------------CCceEEEEEecCCCcHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHhhhcc
Confidence            345567777766665442            23457899999999999988654 36789999999999999999999999


Q ss_pred             CCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc--ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhh
Q 014171           86 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLC  162 (429)
Q Consensus        86 ~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~--~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~  162 (429)
                      +|+||||||+||+++   .++.+||+|||+|+.......  .....||+.|+|||++.+ .++.++||||+||++|+|+|
T Consensus       121 ~iiHrDlKp~Nill~---~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~k~DVwS~Gvil~el~t  197 (263)
T d1sm2a_         121 CVIHRDLAARNCLVG---ENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFS  197 (263)
T ss_dssp             TCCCTTCSGGGEEEC---GGGCEEECSCC------------------CTTSCCHHHHTTCCCCHHHHHHHHHHHHHHHHT
T ss_pred             ceeecccchhheeec---CCCCeEecccchheeccCCCceeecceecCcccCChHHhcCCCCCchhhhcchHHHHHHHHH
Confidence            999999999999999   478999999999987654332  234578999999999874 56899999999999999999


Q ss_pred             -CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          163 -GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       163 -g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                       |.+||...+..+....+..+.....   +..+++++.+|+.+||+.||.+|||++++++|
T Consensus       198 ~~~~~~~~~~~~~~~~~i~~~~~~~~---p~~~~~~l~~li~~cl~~~p~~Rps~~~il~~  255 (263)
T d1sm2a_         198 EGKIPYENRSNSEVVEDISTGFRLYK---PRLASTHVYQIMNHCWKERPEDRPAFSRLLRQ  255 (263)
T ss_dssp             TSCCTTCSCCHHHHHHHHHHTCCCCC---CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHhcCCCCC---ccccCHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence             5677777777777777776643322   24578999999999999999999999999865

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.7e-39  Score=306.44  Aligned_cols=215  Identities=23%  Similarity=0.313  Sum_probs=162.3

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG   86 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~   86 (429)
                      +.++|+|++++..++....    ..........|+|||||.+|.+....  .....+++..++.++.||+.||.|||++|
T Consensus        64 ~~l~h~nii~~~~~~~~~~----~~~~~~~~~~~iv~e~~~~~~~~~~~--~~~~~~~~~~~~~i~~qil~~l~~lH~~~  137 (318)
T d3blha1          64 QLLKHENVVNLIEICRTKA----SPYNRCKGSIYLVFDFCEHDLAGLLS--NVLVKFTLSEIKRVMQMLLNGLYYIHRNK  137 (318)
T ss_dssp             HHCCCTTBCCEEEEEEC--------------CEEEEEECCCEEHHHHHT--CTTCCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHhcCCCccceEeeeeccc----ccccccCceEEEEEeccCCCccchhh--hcccccccHHHHHHHHHHHHHHHHhccCC
Confidence            4455666666555544311    11122233457899999977665433  44478999999999999999999999999


Q ss_pred             CeecCCCCCcEEEeecCCCCCEEEeecccceeccCCC-----cccccccCCcccccccccC--CCCCCcchHHHHHHHHH
Q 014171           87 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYI  159 (429)
Q Consensus        87 i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~-----~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~  159 (429)
                      |+||||||+|||++   .++.+||+|||+|.......     .....+||+.|+|||++.+  .++.++||||+||++|+
T Consensus       138 ivHrDlKp~NILl~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~gT~~Y~aPE~~~~~~~~~~k~DiwSlGvil~e  214 (318)
T d3blha1         138 ILHRDMKAANVLIT---RDGVLKLADFGLARAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAE  214 (318)
T ss_dssp             EECCCCCGGGEEEC---TTSCEEECCCTTCEECCC-----CCCCCSCCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHH
T ss_pred             EEecCcCchheeec---CCCcEEeeecceeeecccccccccccccceecCHHHhhHHHHcCCCCCCcHHHcccCCceeee
Confidence            99999999999998   57899999999997664322     2344579999999999864  46899999999999999


Q ss_pred             HhhCCCCCCCCChhHHHHHHHhcCCCCCCCCCCC----------------------------CCHHHHHHHHHhccCCcc
Q 014171          160 LLCGRRPFWDKTEDGIFKEVLRNKPDFRRKPWPS----------------------------ISNSAKDFVKKLLVKDPR  211 (429)
Q Consensus       160 l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~----------------------------~~~~~~~li~~~l~~dp~  211 (429)
                      |++|+.||.+.+.......+......+....+..                            .++.+.+||.+||+.||+
T Consensus       215 l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~  294 (318)
T d3blha1         215 MWTRSPIMQGNTEQHQLALISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVLDPA  294 (318)
T ss_dssp             HHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTTCCCC-------CCSSCCBCHHHHHHHHHCCHHHHHHHHHHSCSSTT
T ss_pred             HhhCCCCCCCCCHHHHHHHHHHhcCCCChhhccccchhhhhhhhcccccccccchhhhccccCCHHHHHHHHHHCcCChh
Confidence            9999999998888777766655433332222111                            256788999999999999


Q ss_pred             CcCCHHHHhCCCccccCCC
Q 014171          212 ARLTAAQALSHPWVREGGD  230 (429)
Q Consensus       212 ~R~s~~e~l~h~~~~~~~~  230 (429)
                      +|||++|+|+||||++...
T Consensus       295 ~R~sa~elL~Hpff~~~p~  313 (318)
T d3blha1         295 QRIDSDDALNHDFFWSDPM  313 (318)
T ss_dssp             TSCCHHHHHHSGGGSSSSC
T ss_pred             HCcCHHHHHcChhhccCCC
Confidence            9999999999999997543

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.1e-39  Score=303.12  Aligned_cols=186  Identities=26%  Similarity=0.372  Sum_probs=149.2

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...|+|+|||.++.+..+.  ...+.+++..+..++.||+.||+|||++||+||||||+|||++   .++.+||+|||.|
T Consensus        73 ~~~~i~~e~~~~~~~~~~~--~~~~~l~~~~~~~i~~qi~~~L~~LH~~~IvHrDiKp~NIll~---~~~~~kl~DfG~a  147 (286)
T d1ob3a_          73 KRLVLVFEHLDQDLKKLLD--VCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLIN---REGELKIADFGLA  147 (286)
T ss_dssp             SCEEEEEECCSEEHHHHHH--TSTTCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---TTSCEEECCTTHH
T ss_pred             CceeEEEEeehhhhHHHHH--hhcCCcchhhhHHHHHHHHHHHHHhccCcEEecCCCCceeeEc---CCCCEEecccccc
Confidence            3456799999877665554  3347899999999999999999999999999999999999998   5789999999999


Q ss_pred             eeccCCCc-ccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCC-----
Q 014171          117 DFIKPGKK-FQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRR-----  188 (429)
Q Consensus       117 ~~~~~~~~-~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~-----  188 (429)
                      ........ .....|++.|+|||.+.+  .++.++||||+||++|+|++|+.||.+.+..+...++.........     
T Consensus       148 ~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~  227 (286)
T d1ob3a_         148 RAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWPN  227 (286)
T ss_dssp             HHHCC---------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTSTT
T ss_pred             eecccCccccceecccchhhhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhccc
Confidence            87654332 344578999999999864  4589999999999999999999999988877776665532111110     


Q ss_pred             --------------------CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCcccc
Q 014171          189 --------------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVRE  227 (429)
Q Consensus       189 --------------------~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~  227 (429)
                                          ...+.+++.+++||.+||+.||++|||++|+|+||||++
T Consensus       228 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~s~~ell~Hp~f~~  286 (286)
T d1ob3a_         228 VTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAKQALEHAYFKE  286 (286)
T ss_dssp             GGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHHHHHTSGGGGC
T ss_pred             hhhhhhcccccccccCcchhhhcccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCc
Confidence                                113457889999999999999999999999999999974

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4e-39  Score=293.91  Aligned_cols=198  Identities=17%  Similarity=0.255  Sum_probs=164.5

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH   85 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~   85 (429)
                      +..++|+|++.+++++..            +...|+|||||++|+|.+++.... ..+++..+..++.||++||.|||++
T Consensus        53 ~~~l~HpnIv~~~g~~~~------------~~~~~iv~Ey~~~g~l~~~~~~~~-~~~~~~~~~~i~~qi~~gl~~LH~~  119 (258)
T d1k2pa_          53 MMNLSHEKLVQLYGVCTK------------QRPIFIITEYMANGCLLNYLREMR-HRFQTQQLLEMCKDVCEAMEYLESK  119 (258)
T ss_dssp             HHTCCCTTBCCEEEEECC------------SSSEEEEEECCTTEEHHHHHHSGG-GCCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHhcCCCceeeEEEEEee------------CCceEEEEEccCCCcHHHhhhccc-cCCcHHHHHHHHHHHHHHHHHHhhc
Confidence            345567777776665432            233468999999999999876553 5789999999999999999999999


Q ss_pred             CCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc--ccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh
Q 014171           86 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC  162 (429)
Q Consensus        86 ~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~--~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~  162 (429)
                      ||+||||||+||+++   .++.+||+|||+|+.......  .....||+.|+|||++. +.++.++||||+||++|+|+|
T Consensus       120 ~iiH~dlk~~Nill~---~~~~~kl~DfG~a~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~ksDiwS~G~~l~el~t  196 (258)
T d1k2pa_         120 QFLHRDLAARNCLVN---DQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS  196 (258)
T ss_dssp             TBCCSCCSGGGEEEC---TTCCEEECCCSSCCBCSSSSCCCCCCSCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred             CcccccccceeEEEc---CCCcEEECcchhheeccCCCceeecccCCCCCcCCcHHhcCCCCCcceeecccchhhHhHHh
Confidence            999999999999998   578999999999986654332  23456899999999986 456889999999999999998


Q ss_pred             -CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          163 -GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       163 -g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                       |+.||.+.+..++...+..+....   .+...++++++||.+||+.||++|||++++++|
T Consensus       197 ~g~~Pf~~~~~~~~~~~i~~~~~~~---~p~~~~~~l~~li~~cl~~dP~~RPt~~eil~~  254 (258)
T d1k2pa_         197 LGKMPYERFTNSETAEHIAQGLRLY---RPHLASEKVYTIMYSCWHEKADERPTFKILLSN  254 (258)
T ss_dssp             TSCCTTTTSCHHHHHHHHHTTCCCC---CCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHH
T ss_pred             cCCCCCCCCCHHHHHHHHHhCCCCC---CcccccHHHHHHHHHHccCCHhHCcCHHHHHHH
Confidence             899999999888888887764322   235678999999999999999999999999976

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-39  Score=300.06  Aligned_cols=197  Identities=20%  Similarity=0.303  Sum_probs=153.6

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH   85 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~   85 (429)
                      ++.++|||++++++.+.             ....|+|||||++|+|.+++... ...+++..+..++.||++||.|||++
T Consensus        62 l~~l~HpnIv~l~~~~~-------------~~~~~iv~E~~~~g~l~~~~~~~-~~~l~~~~~~~~~~qi~~gl~ylH~~  127 (273)
T d1mp8a_          62 MRQFDHPHIVKLIGVIT-------------ENPVWIIMELCTLGELRSFLQVR-KYSLDLASLILYAYQLSTALAYLESK  127 (273)
T ss_dssp             HHTCCCTTBCCEEEEEC-------------SSSCEEEEECCTTEEHHHHHHHT-TTTSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHhCCCCCEeeEEEEEe-------------cCeEEEEEEeccCCcHHhhhhcc-CCCCCHHHHHHHHHHHHHHhhhhccc
Confidence            34556777666665442             12356899999999999987654 46799999999999999999999999


Q ss_pred             CCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc--ccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh
Q 014171           86 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK--FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC  162 (429)
Q Consensus        86 ~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~--~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~  162 (429)
                      ||+||||||+||+++.   .+.+||+|||+|+.......  .....||+.|+|||++. +.++.++||||+||++|+|++
T Consensus       128 ~iiHrDlKp~NIll~~---~~~~Kl~DfG~a~~~~~~~~~~~~~~~gt~~y~apE~l~~~~~~~~~DiwSlGvil~e~lt  204 (273)
T d1mp8a_         128 RFVHRDIAARNVLVSS---NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILM  204 (273)
T ss_dssp             TCCCSCCSGGGEEEEE---TTEEEECC-------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHT
T ss_pred             CeeccccchhheeecC---CCcEEEccchhheeccCCcceeccceecCcccchhhHhccCCCCCccccccchHHHHHHHh
Confidence            9999999999999994   78899999999987653322  23456789999999986 467889999999999999998


Q ss_pred             -CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          163 -GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       163 -g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                       |.+||.+.+..+....+..+...   +.++.+|+.+++||.+||+.||.+|||+++++++
T Consensus       205 ~g~~P~~~~~~~~~~~~i~~~~~~---~~~~~~~~~~~~li~~cl~~dp~~Rps~~ei~~~  262 (273)
T d1mp8a_         205 HGVKPFQGVKNNDVIGRIENGERL---PMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQ  262 (273)
T ss_dssp             TSCCTTTTCCGGGHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCCCCCCCCCHHHHHHHHHcCCCC---CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence             89999999998888888776532   3346789999999999999999999999999754

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.2e-39  Score=307.71  Aligned_cols=186  Identities=26%  Similarity=0.457  Sum_probs=151.4

Q ss_pred             eeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccceec
Q 014171           40 LRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFI  119 (429)
Q Consensus        40 ~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~  119 (429)
                      +++++||.||+|.+++..   ..+++..++.++.||+.||+|||++||+||||||+|||++   ..+.+||+|||+|...
T Consensus        86 ~~l~~~~~~g~L~~~l~~---~~l~~~~i~~i~~qil~al~yLH~~~iiHRDIKp~NILl~---~~~~~kl~DfG~a~~~  159 (345)
T d1pmea_          86 VYLVTHLMGADLYKLLKT---QHLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLN---TTCDLKICDFGLARVA  159 (345)
T ss_dssp             EEEEEECCCEEHHHHHHH---CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC---TTCCEEECCCTTCEEC
T ss_pred             EEEEEeecCCchhhhhhc---CCCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCcceEEEC---CCCCEEEcccCceeec
Confidence            456677889999999854   3799999999999999999999999999999999999998   5789999999999765


Q ss_pred             cCCC----cccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcC----------
Q 014171          120 KPGK----KFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNK----------  183 (429)
Q Consensus       120 ~~~~----~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~----------  183 (429)
                      ....    .....+||+.|+|||++..  .++.++||||+||++|+|++|+.||.+.+............          
T Consensus       160 ~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  239 (345)
T d1pmea_         160 DPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLNC  239 (345)
T ss_dssp             CGGGCBCCTTCCCCSCGGGCCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCHHHHHT
T ss_pred             cCCCccceeeccccccceechHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCChhhhhh
Confidence            4322    2345679999999999853  45889999999999999999999998877655554433211          


Q ss_pred             -------------CCCCC----CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCCCC
Q 014171          184 -------------PDFRR----KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGGDA  231 (429)
Q Consensus       184 -------------~~~~~----~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~~~  231 (429)
                                   +....    ..++.+++++++||.+||+.||.+|||++++|+||||+.....
T Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~ta~e~L~hpf~~~~~~~  304 (345)
T d1pmea_         240 IINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHPYLEQYYDP  304 (345)
T ss_dssp             CCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSTTTSCCHHHHHTSGGGTTTCCG
T ss_pred             hhhhhhhcccccCCccCCCCHHHhCCCCCHHHHHHHHHHccCChhHCcCHHHHhcCHhhccCCCC
Confidence                         11111    1235678999999999999999999999999999999976543

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.4e-39  Score=299.43  Aligned_cols=204  Identities=21%  Similarity=0.235  Sum_probs=159.8

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG   86 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~   86 (429)
                      ..++|+|++++++.+.             ....|+|||||++|+|..++.......+++.++..++.||+.||+|||++|
T Consensus        67 ~~l~h~nIv~~~g~~~-------------~~~~~lv~Ey~~~g~l~~~~~~~~~~~l~~~~~~~i~~~i~~gl~~LH~~~  133 (285)
T d1fmka3          67 KKLRHEKLVQLYAVVS-------------EEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMN  133 (285)
T ss_dssp             HHCCCTTBCCEEEEEC-------------SSSCEEEECCCTTCBHHHHHSHHHHTTCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HhcccCCEeEEEEEEe-------------cCCeEEEEEecCCCchhhhhhhcccccchHHHHHHHHHHHHHHHHHHhhhh
Confidence            4456666665555432             223568999999999999987766678999999999999999999999999


Q ss_pred             CeecCCCCCcEEEeecCCCCCEEEeecccceeccCCC--cccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhhC
Q 014171           87 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK--KFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCG  163 (429)
Q Consensus        87 i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~--~~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~g  163 (429)
                      |+||||||+|||++   .++.+||+|||+|+......  ......||+.|+|||.+. +.++.++||||+||++|+|++|
T Consensus       134 ivH~DlKp~NIll~---~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~S~Giil~el~t~  210 (285)
T d1fmka3         134 YVHRDLRAANILVG---ENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTK  210 (285)
T ss_dssp             CCCSCCSGGGEEEC---GGGCEEECCCCTTC--------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTT
T ss_pred             eecccccceEEEEC---CCCcEEEcccchhhhccCCCceeeccccccccccChHHHhCCCCCcHHhhhcchHHHHHHHhC
Confidence            99999999999998   47899999999998764333  223457899999999986 4668999999999999999996


Q ss_pred             C-CCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC--CCccccCC
Q 014171          164 R-RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS--HPWVREGG  229 (429)
Q Consensus       164 ~-~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~--h~~~~~~~  229 (429)
                      . +|+.+....+....+..+..   .+..+.+++++++||.+||+.||++|||++++++  ++||+...
T Consensus       211 ~~p~~~~~~~~~~~~~i~~~~~---~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~~~~~~~  276 (285)
T d1fmka3         211 GRVPYPGMVNREVLDQVERGYR---MPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTE  276 (285)
T ss_dssp             TCCSSTTCCHHHHHHHHHTTCC---CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSC
T ss_pred             CCCCCCCCCHHHHHHHHHhcCC---CCCCcccCHHHHHHHHHHcccCHhHCcCHHHHHHHHhhhhcCCC
Confidence            5 55556666667766665532   2234578999999999999999999999999988  88998764

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.1e-39  Score=306.70  Aligned_cols=208  Identities=27%  Similarity=0.433  Sum_probs=162.6

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG   86 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~   86 (429)
                      +.++|+|++++.+++........      ....|+||||| |++|...+. .  +.+++..++.++.||+.||.|||++|
T Consensus        72 ~~l~hpniv~l~~~~~~~~~~~~------~~~~~lv~e~~-~~~l~~~~~-~--~~l~~~~~~~~~~qi~~aL~~LH~~~  141 (346)
T d1cm8a_          72 KHMRHENVIGLLDVFTPDETLDD------FTDFYLVMPFM-GTDLGKLMK-H--EKLGEDRIQFLVYQMLKGLRYIHAAG  141 (346)
T ss_dssp             HHCCBTTBCCCSEEECSCSSTTT------CCCCEEEEECC-SEEHHHHHH-H--CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HhcCCCCeeEEEEEeccCccccc------cceEEEEEecc-cccHHHHHH-h--ccccHHHHHHHHHHHHHHHHHHHhCC
Confidence            45566666666665554322211      12346899999 566666553 3  57999999999999999999999999


Q ss_pred             CeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCC
Q 014171           87 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGR  164 (429)
Q Consensus        87 i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~  164 (429)
                      |+||||||+|||++   .++.+||+|||.|+.....  .....||+.|+|||++.+  .++.++||||+||++|+|++|+
T Consensus       142 IiHrDiKp~NIL~~---~~~~~kl~Dfg~a~~~~~~--~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~  216 (346)
T d1cm8a_         142 IIHRDLKPGNLAVN---EDCELKILDFGLARQADSE--MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK  216 (346)
T ss_dssp             EECCCCCGGGEEEC---TTCCEEECCCTTCEECCSS--CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSS
T ss_pred             CcccccCcchhhcc---cccccccccccceeccCCc--cccccccccccCHHHHcCCCCCCccchhhcchHHHHHHHHCc
Confidence            99999999999998   5889999999999876543  345689999999999864  3588999999999999999999


Q ss_pred             CCCCCCChhHHHHHHHhcC-----------------------CCCCC----CCCCCCCHHHHHHHHHhccCCccCcCCHH
Q 014171          165 RPFWDKTEDGIFKEVLRNK-----------------------PDFRR----KPWPSISNSAKDFVKKLLVKDPRARLTAA  217 (429)
Q Consensus       165 ~pf~~~~~~~~~~~i~~~~-----------------------~~~~~----~~~~~~~~~~~~li~~~l~~dp~~R~s~~  217 (429)
                      +||.+.+.......+....                       +....    ...+.+++++.+||.+||+.||.+|||++
T Consensus       217 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~  296 (346)
T d1cm8a_         217 TLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAG  296 (346)
T ss_dssp             CSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred             CCCCCCChHHHHHHHHhccCCCcHHHHhhhcchhhhhhhccCCcccccchHHhccCCCHHHHHHHHHHCcCChhHCcCHH
Confidence            9998887666554433211                       11111    12346789999999999999999999999


Q ss_pred             HHhCCCccccCC
Q 014171          218 QALSHPWVREGG  229 (429)
Q Consensus       218 e~l~h~~~~~~~  229 (429)
                      |+|+||||+...
T Consensus       297 eiL~Hp~f~~~~  308 (346)
T d1cm8a_         297 EALAHPYFESLH  308 (346)
T ss_dssp             HHHHSGGGTTTC
T ss_pred             HHhcChhhCcCC
Confidence            999999998754

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.3e-39  Score=300.33  Aligned_cols=179  Identities=21%  Similarity=0.257  Sum_probs=141.9

Q ss_pred             ceeEeeecCCCChHHHHHhhc--------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCC
Q 014171           39 KLRRIRLCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKE  104 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~  104 (429)
                      .++|||||+||+|.+++...+              ...+++.++..++.||+.||.|||++||+||||||+|||++   .
T Consensus        93 ~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~gl~ylH~~~ivHrDlKp~NILl~---~  169 (299)
T d1ywna1          93 LMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLS---E  169 (299)
T ss_dssp             CEEEEECCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEC---G
T ss_pred             EEEEEEecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHHHHHHHHHHHHHhCCCcCCcCCccceeEC---C
Confidence            578999999999999997543              23589999999999999999999999999999999999998   4


Q ss_pred             CCCEEEeecccceeccCCC---cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhC-CCCCCCCChhHHHHHH
Q 014171          105 DSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCG-RRPFWDKTEDGIFKEV  179 (429)
Q Consensus       105 ~~~~kL~Dfg~a~~~~~~~---~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g-~~pf~~~~~~~~~~~i  179 (429)
                      ++.+||+|||+|+......   ......||+.|+|||++.+ .++.++||||+||++|+|++| .+||.+......+..+
T Consensus       170 ~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~  249 (299)
T d1ywna1         170 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRR  249 (299)
T ss_dssp             GGCEEECC------CCSCTTSCCTTSCCCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHH
T ss_pred             CCcEEEccCcchhhccccccccccCceeeCccccchhHhhcCCCCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            7899999999998654332   2345679999999999864 568999999999999999986 5678776655555444


Q ss_pred             HhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          180 LRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       180 ~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      ......+  ..+..++++++++|.+||+.||.+|||++++++|
T Consensus       250 ~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rpt~~eil~~  290 (299)
T d1ywna1         250 LKEGTRM--RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH  290 (299)
T ss_dssp             HHHTCCC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HhcCCCC--CCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            4433322  2335689999999999999999999999999876

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-39  Score=304.31  Aligned_cols=188  Identities=29%  Similarity=0.471  Sum_probs=156.1

Q ss_pred             cccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           36 PLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        36 ~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      +...|+|||||.||+|.+++...  +.+++..+..++.||+.||+|||++||+||||||+||+++   .++.+||+|||+
T Consensus       101 ~~~~~~v~e~~~~~~L~~~i~~~--~~~~e~~~~~~~~Qi~~al~~lH~~~ivHrDiKp~Nill~---~~~~vkL~DFG~  175 (322)
T d1vzoa_         101 ETKLHLILDYINGGELFTHLSQR--ERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLD---SNGHVVLTDFGL  175 (322)
T ss_dssp             TTEEEEEECCCCSCBHHHHHHHH--SCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEC---TTSCEEESCSSE
T ss_pred             CCceeeeeecccccHHHHHHHhc--ccccHHHHHHHHHHHHHHHHHhhcCCEEeccCCccceeec---CCCCEEEeeccc
Confidence            34457899999999999999766  6789999999999999999999999999999999999999   578999999999


Q ss_pred             ceeccCC--CcccccccCCcccccccccC---CCCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHHhcCCCCCCCC
Q 014171          116 SDFIKPG--KKFQDIVGSAYYVAPEVLKR---KSGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVLRNKPDFRRKP  190 (429)
Q Consensus       116 a~~~~~~--~~~~~~~g~~~y~aPE~~~~---~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~  190 (429)
                      |+.+...  .......|++.|+|||.+.+   .++.++||||+||++|+|++|+.||.+.+.......+.........+.
T Consensus       176 a~~~~~~~~~~~~~~~g~~~~~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~~~~~~~~~~~  255 (322)
T d1vzoa_         176 SKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPY  255 (322)
T ss_dssp             EEECCGGGGGGGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHHHHHHHCCCCC
T ss_pred             hhhhcccccccccccccccccchhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcccCCCCC
Confidence            9876432  22345679999999999864   347899999999999999999999988766555444444332223333


Q ss_pred             CCCCCHHHHHHHHHhccCCccCcC-----CHHHHhCCCccccC
Q 014171          191 WPSISNSAKDFVKKLLVKDPRARL-----TAAQALSHPWVREG  228 (429)
Q Consensus       191 ~~~~~~~~~~li~~~l~~dp~~R~-----s~~e~l~h~~~~~~  228 (429)
                      ++.+++++++||.+||++||.+||     |++|+++||||+..
T Consensus       256 ~~~~s~~~~~li~~~l~~dP~~R~s~~~~t~~eil~Hpff~~i  298 (322)
T d1vzoa_         256 PQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHLFFQKI  298 (322)
T ss_dssp             CTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSGGGTTC
T ss_pred             cccCCHHHHHHHHHHcccCHHHcCCCCcccHHHHHcCHhhcCC
Confidence            456899999999999999999999     58999999999864

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=100.00  E-value=8.1e-39  Score=303.09  Aligned_cols=184  Identities=26%  Similarity=0.474  Sum_probs=149.9

Q ss_pred             ceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccccee
Q 014171           39 KLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDF  118 (429)
Q Consensus        39 ~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~  118 (429)
                      .|+|||||.+|+|....     +.+++..++.++.||+.||.|||++||+||||||+|||++.  +++.+||+|||+|..
T Consensus       107 ~~~v~e~~~~~~L~~~~-----~~l~e~~i~~i~~qil~aL~~LH~~gIvHrDiKp~NILi~~--~~~~vkl~DFG~a~~  179 (328)
T d3bqca1         107 PALVFEHVNNTDFKQLY-----QTLTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDH--EHRKLRLIDWGLAEF  179 (328)
T ss_dssp             EEEEEECCCSCBGGGTT-----TSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEET--TTTEEEECCGGGCEE
T ss_pred             eeEEEeecCCCcHHHHh-----cCCCHHHHHHHHHHHHHHHHHHhhcccccccccccceEEcC--CCCeeeeccccccee
Confidence            46799999999997643     47999999999999999999999999999999999999984  345799999999998


Q ss_pred             ccCCCcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCCCCCCCCChhH-HHHHHHh-------------c
Q 014171          119 IKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGRRPFWDKTEDG-IFKEVLR-------------N  182 (429)
Q Consensus       119 ~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~i~~-------------~  182 (429)
                      ..........++|+.|+|||.+.+  .++.++|+||+||++|+|++|+.||....... ....+..             .
T Consensus       180 ~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g~~~~~~~~~~~  259 (328)
T d3bqca1         180 YHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDKY  259 (328)
T ss_dssp             CCTTCCCCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHCHHHHHHHHHHT
T ss_pred             ccCCCcccccccCccccCcccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHCCchhhhhhhhc
Confidence            877766777889999999999864  35889999999999999999999997654322 1111110             0


Q ss_pred             CCC--------------------CCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          183 KPD--------------------FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       183 ~~~--------------------~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                      ...                    ........+++++++||.+||+.||.+|||++|+|+||||+...
T Consensus       260 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~e~L~Hp~F~~v~  326 (328)
T d3bqca1         260 NIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYFYTVV  326 (328)
T ss_dssp             TCCCCGGGGGTCCCCCCCCGGGGCCTTTGGGCCHHHHHHHHHHSCSSGGGSCCHHHHHTSGGGTTSC
T ss_pred             ccccCcccchhcccccccchhhcccccccccCCHHHHHHHHHHccCChhHCcCHHHHhcCcccCCCC
Confidence            000                    01112234789999999999999999999999999999998754

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-38  Score=292.04  Aligned_cols=196  Identities=18%  Similarity=0.245  Sum_probs=159.9

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH   85 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~   85 (429)
                      ++.++|+|++++++.+..             ...++|||||++|++.+++..+. +.+++..+..++.||+.||.|||++
T Consensus        65 l~~l~H~nIv~~~g~~~~-------------~~~~lv~e~~~~~~l~~~~~~~~-~~l~~~~~~~~~~qi~~gl~ylH~~  130 (273)
T d1u46a_          65 MHSLDHRNLIRLYGVVLT-------------PPMKMVTELAPLGSLLDRLRKHQ-GHFLLGTLSRYAVQVAEGMGYLESK  130 (273)
T ss_dssp             HHHCCCTTBCCEEEEECS-------------SSCEEEEECCTTCBHHHHHHHHG-GGSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHhCCCCCEEEEEEEEee-------------cchheeeeeecCcchhhhhhccc-CCCCHHHHHHHHHHHHHHHHHhhhC
Confidence            344556666655554432             22468999999999999887653 5799999999999999999999999


Q ss_pred             CCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc----ccccccCCcccccccccC-CCCCCcchHHHHHHHHHH
Q 014171           86 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYIL  160 (429)
Q Consensus        86 ~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~----~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l  160 (429)
                      ||+||||||+||+++.   ++.+||+|||+++.......    .....|+..|+|||++.+ .++.++||||+||++|||
T Consensus       131 ~iiHrDikp~NIll~~---~~~vkl~DfGl~~~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~S~Gvil~em  207 (273)
T d1u46a_         131 RFIHRDLAARNLLLAT---RDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEM  207 (273)
T ss_dssp             TEECSCCCGGGEEEEE---TTEEEECCCTTCEECCC-CCEEEC-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHH
T ss_pred             CEeeeeecHHHhcccc---ccceeeccchhhhhcccCCCcceecCccccCcccCCHHHHhCCCCCcchhhhhhHHHHHHH
Confidence            9999999999999994   67899999999987754432    233467889999999875 458889999999999999


Q ss_pred             hh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHh
Q 014171          161 LC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL  220 (429)
Q Consensus       161 ~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l  220 (429)
                      +| |++||.+.+..+....+......++  .++.+|+++++||.+||+.||.+|||+++++
T Consensus       208 lt~G~~Pf~~~~~~~~~~~i~~~~~~~~--~~~~~~~~l~~li~~cl~~dp~~RPt~~ei~  266 (273)
T d1u46a_         208 FTYGQEPWIGLNGSQILHKIDKEGERLP--RPEDCPQDIYNVMVQCWAHKPEDRPTFVALR  266 (273)
T ss_dssp             HTTSCCTTTTCCHHHHHHHHHTSCCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred             HhCCCCCCCCcCHHHHHHHHHhCCCCCC--CcccccHHHHHHHHHHcCCChhHCcCHHHHH
Confidence            98 8999999999999888887765443  3457899999999999999999999999986

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-38  Score=289.97  Aligned_cols=196  Identities=19%  Similarity=0.235  Sum_probs=153.5

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG   86 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~   86 (429)
                      +.++|+|++++++++..           .+...|+|||||++|+|.+++.+.....+++..+..++.||+.||.|||+++
T Consensus        55 ~~l~HpnIv~~~g~~~~-----------~~~~~~lv~ey~~~g~L~~~l~~~~~~~l~~~~~~~i~~~i~~al~ylH~~~  123 (262)
T d1byga_          55 TQLRHSNLVQLLGVIVE-----------EKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNN  123 (262)
T ss_dssp             TTCCCTTBCCEEEEECC-----------C--CCEEEECCCTTEEHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HhCCCCCEeeEEEEEEe-----------cCCcEEEEEeccCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHhhccccccCc
Confidence            34556666555553321           1123468999999999999997665456999999999999999999999999


Q ss_pred             CeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh-CC
Q 014171           87 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC-GR  164 (429)
Q Consensus        87 i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~-g~  164 (429)
                      |+||||||+||+++   .++.+||+|||+++.....  .....+++.|+|||++. +.+++++|||||||++|+|+| |+
T Consensus       124 ivH~dlkp~Nil~~---~~~~~kl~dfg~s~~~~~~--~~~~~~~~~y~aPE~l~~~~~t~~sDIwSfG~il~el~t~~~  198 (262)
T d1byga_         124 FVHRDLAARNVLVS---EDNVAKVSDFGLTKEASST--QDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGR  198 (262)
T ss_dssp             CCCSCCSGGGEEEC---TTSCEEECCCCC--------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSC
T ss_pred             eeccccchHhheec---CCCCEeecccccceecCCC--CccccccccCCChHHHhCCCCChHHHHHhHHHHHHHHHHCCC
Confidence            99999999999999   5889999999999865433  23456789999999885 567899999999999999998 78


Q ss_pred             CCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          165 RPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       165 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      +||.+.+.......+..+..   ++.++.+++++++||.+||+.||.+|||+.++++
T Consensus       199 ~p~~~~~~~~~~~~i~~~~~---~~~~~~~~~~~~~li~~cl~~dP~~Rps~~~l~~  252 (262)
T d1byga_         199 VPYPRIPLKDVVPRVEKGYK---MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLRE  252 (262)
T ss_dssp             CSCTTSCGGGHHHHHTTTCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCCCCCCHHHHHHHHHcCCC---CCCCccCCHHHHHHHHHHcccCHhHCcCHHHHHH
Confidence            99988888888887765432   2233568999999999999999999999999874

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.3e-38  Score=290.34  Aligned_cols=197  Identities=18%  Similarity=0.269  Sum_probs=150.0

Q ss_pred             ecccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHC
Q 014171            6 IGDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLH   85 (429)
Q Consensus         6 ~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~   85 (429)
                      +..++|+|++++++++..            ....++|||||.+|++.+.+... ...+++.++..++.||+.||+|||++
T Consensus        63 l~~l~H~nIv~~~g~~~~------------~~~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~~i~~gl~~lH~~  129 (283)
T d1mqba_          63 MGQFSHHNIIRLEGVISK------------YKPMMIITEYMENGALDKFLREK-DGEFSVLQLVGMLRGIAAGMKYLANM  129 (283)
T ss_dssp             HHTCCCTTBCCEEEEECS------------SSSEEEEEECCTTEEHHHHHHHT-TTCSCHHHHHHHHHHHHHHHHHHHHT
T ss_pred             HHhcCCCCEeeeeEEEec------------CCceEEEEEecccCcchhhhhcc-cccccHHHHHHHHHHHHHhhhhcccc
Confidence            344566666666654432            23346799999999999877654 36799999999999999999999999


Q ss_pred             CCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc----ccccccCCcccccccccC-CCCCCcchHHHHHHHHHH
Q 014171           86 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK----FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYIL  160 (429)
Q Consensus        86 ~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~----~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l  160 (429)
                      ||+||||||+|||++   .++.+||+|||+|+.......    .....||+.|+|||++.+ .++.++||||+||++|+|
T Consensus       130 ~iiHrDlKp~NILl~---~~~~~Kl~DFGla~~~~~~~~~~~~~~~~~gt~~Y~APE~l~~~~~~~~sDI~S~Gvil~el  206 (283)
T d1mqba_         130 NYVHRDLAARNILVN---SNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEV  206 (283)
T ss_dssp             TCCCSCCCGGGEEEC---TTCCEEECCCCC-----------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHH
T ss_pred             ccccCccccceEEEC---CCCeEEEcccchhhcccCCCccceEeccCCCCccccCHHHHccCCCCCcccccccHHHHHHH
Confidence            999999999999999   578999999999987643321    233467899999998864 568899999999999999


Q ss_pred             hhCCC-CCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          161 LCGRR-PFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       161 ~~g~~-pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ++|.. |+.+.+..+....+..+..   .+.+..++..+++||.+||+.||.+|||+.++++
T Consensus       207 ~t~~~~~~~~~~~~~~~~~i~~~~~---~~~~~~~~~~l~~li~~cl~~~p~~RPt~~eil~  265 (283)
T d1mqba_         207 MTYGERPYWELSNHEVMKAINDGFR---LPTPMDCPSAIYQLMMQCWQQERARRPKFADIVS  265 (283)
T ss_dssp             HTTSCCTTTTCCHHHHHHHHHTTCC---CCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHH
T ss_pred             HhCCCCccccCCHHHHHHHHhccCC---CCCchhhHHHHHHHHHHHCcCCHhHCcCHHHHHH
Confidence            99655 4555566666666655532   2233568899999999999999999999999875

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.9e-38  Score=301.79  Aligned_cols=210  Identities=27%  Similarity=0.432  Sum_probs=160.3

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG   86 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~   86 (429)
                      +.++|+|++++..++.......       ....++|++||.||+|.+++..   +.+++..++.++.||+.||+|||++|
T Consensus        72 ~~l~h~~iv~~~~~~~~~~~~~-------~~~~~~i~~~~~gg~L~~~~~~---~~l~e~~~~~i~~qil~aL~~LH~~g  141 (348)
T d2gfsa1          72 KHMKHENVIGLLDVFTPARSLE-------EFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQILRGLKYIHSAD  141 (348)
T ss_dssp             HHCCCTTBCCCSEEECSCSSTT-------TCCCCEEEEECCSEEHHHHHTT---CCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HhcCCCCeeeEEEEEeeccccc-------cCceEEEEEeecCCchhhhccc---ccccHHHHHHHHHHHHHHHHHHHhCC
Confidence            3445555555555444321111       1123457888999999998832   47999999999999999999999999


Q ss_pred             CeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccC--CCCCCcchHHHHHHHHHHhhCC
Q 014171           87 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR--KSGPESDVWSIGVITYILLCGR  164 (429)
Q Consensus        87 i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~DiwslG~il~~l~~g~  164 (429)
                      |+||||||+|||++   .++.+|++|||.|....  ....+..|++.|+|||++.+  .++.++||||+||++|+|++|+
T Consensus       142 iiHrDiKp~NILi~---~~~~~kl~dfg~a~~~~--~~~~~~~g~~~y~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~  216 (348)
T d2gfsa1         142 IIHRDLKPSNLAVN---EDCELKILDFGLARHTD--DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR  216 (348)
T ss_dssp             CCCCCCCGGGEEEC---TTCCEEECCC----CCT--GGGSSSCHHHHTSCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSS
T ss_pred             CcccccCCcccccc---ccccccccccchhcccC--cccccccccccccCchhhcCCccCCcccchhhhhHHHHHHHhCC
Confidence            99999999999998   57899999999987553  23345678999999998754  3488999999999999999999


Q ss_pred             CCCCCCChhHHHHHHHhcCCCCC-----------------------CC----CCCCCCHHHHHHHHHhccCCccCcCCHH
Q 014171          165 RPFWDKTEDGIFKEVLRNKPDFR-----------------------RK----PWPSISNSAKDFVKKLLVKDPRARLTAA  217 (429)
Q Consensus       165 ~pf~~~~~~~~~~~i~~~~~~~~-----------------------~~----~~~~~~~~~~~li~~~l~~dp~~R~s~~  217 (429)
                      +||.+.+.......+........                       ..    .+..+++++++||.+||+.||.+|||++
T Consensus       217 ~pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~mL~~dP~~R~ta~  296 (348)
T d2gfsa1         217 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAA  296 (348)
T ss_dssp             CSCCCSSHHHHHHHHHHHHCCCCHHHHTTCCCHHHHHHHTTSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred             CCCCCCCHHHHHHHHHHhcCCCChHHhhhccchhhhhhhhhcccCCCcchhhhcCCCCHHHHHHHHHHCcCChhhCcCHH
Confidence            99998887777666554322111                       10    1245789999999999999999999999


Q ss_pred             HHhCCCccccCCCC
Q 014171          218 QALSHPWVREGGDA  231 (429)
Q Consensus       218 e~l~h~~~~~~~~~  231 (429)
                      |+|+||||++....
T Consensus       297 elL~Hp~f~~~~~~  310 (348)
T d2gfsa1         297 QALAHAYFAQYHDP  310 (348)
T ss_dssp             HHHTSGGGTTTCCT
T ss_pred             HHhcCHhhCCCCCC
Confidence            99999999976543

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.4e-38  Score=296.22  Aligned_cols=196  Identities=20%  Similarity=0.214  Sum_probs=159.4

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG   86 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~   86 (429)
                      +.++|+|++++++++..             ...++|+|||.+|+|.+.+... ...+++..+..++.||+.||.|||++|
T Consensus        66 ~~l~HpnIv~l~g~~~~-------------~~~~~v~e~~~~~~l~~~~~~~-~~~~~~~~~~~i~~qi~~gl~yLH~~~  131 (317)
T d1xkka_          66 ASVDNPHVCRLLGICLT-------------STVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDRR  131 (317)
T ss_dssp             HHCCCTTBCCEEEEEES-------------SSEEEEEECCTTCBHHHHHHHT-SSSCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HhCCCCCEeeEEEEEec-------------CCeeEEEEeccCCccccccccc-ccCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence            34566666666654432             2345789999999999988654 468999999999999999999999999


Q ss_pred             CeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc---ccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhh
Q 014171           87 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLC  162 (429)
Q Consensus        87 i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~  162 (429)
                      |+||||||+||+++.   ++.+||+|||+|+.......   .....||+.|+|||++. +.++.++||||+||++|+|+|
T Consensus       132 iiHrDlKp~NIll~~---~~~~kl~DFGla~~~~~~~~~~~~~~~~gt~~y~APE~l~~~~~~~~sDvwS~Gvil~el~t  208 (317)
T d1xkka_         132 LVHRDLAARNVLVKT---PQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT  208 (317)
T ss_dssp             CCCSCCCGGGEEEEE---TTEEEECCCSHHHHTTTTCC--------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred             cccCcchhhcceeCC---CCCeEeeccccceecccccccccccccccCccccChHHHhcCCCChhhhhhhHHHHHHHHHH
Confidence            999999999999994   78999999999987654332   23346899999999886 456899999999999999998


Q ss_pred             -CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          163 -GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       163 -g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                       |.+||.+.+..+....+..+...   +.++.+++++++|+.+||+.||.+|||+.++++|
T Consensus       209 ~g~~p~~~~~~~~~~~~i~~~~~~---~~p~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  266 (317)
T d1xkka_         209 FGSKPYDGIPASEISSILEKGERL---PQPPICTIDVYMIMVKCWMIDADSRPKFRELIIE  266 (317)
T ss_dssp             TSCCTTTTSCGGGHHHHHHHTCCC---CCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHcCCCC---CCCcccCHHHHHHHHHhCCCChhhCcCHHHHHHH
Confidence             89999888888877777665432   2235689999999999999999999999999976

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.5e-38  Score=300.28  Aligned_cols=208  Identities=25%  Similarity=0.387  Sum_probs=151.0

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG   86 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~   86 (429)
                      +.++|+|++.+.+++..........      ..|+|||||.|| +.+.+  .  ..+++..++.++.||+.||.|||++|
T Consensus        71 ~~l~hpnIv~~~~~f~~~~~~~~~~------~~~iv~Ey~~~~-l~~~~--~--~~~~~~~i~~~~~qil~gl~~LH~~g  139 (355)
T d2b1pa1          71 KCVNHKNIISLLNVFTPQKTLEEFQ------DVYLVMELMDAN-LCQVI--Q--MELDHERMSYLLYQMLCGIKHLHSAG  139 (355)
T ss_dssp             HHCCCTTBCCCSEEECSCCSTTTCC------EEEEEEECCSEE-HHHHH--T--SCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HhcCCCCeeEEEEEEecccccccCc------eeEEEEeccchH-HHHhh--h--cCCCHHHHHHHHHHHHHHHHHhhhcc
Confidence            4456666666666655433322222      335799999765 54444  2  46999999999999999999999999


Q ss_pred             CeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCcccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCCC
Q 014171           87 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGRR  165 (429)
Q Consensus        87 i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~~  165 (429)
                      |+||||||+|||++   .++.+|++|||.++............||+.|+|||++.+ .+++++||||+||++|+|++|++
T Consensus       140 iiHrDlKP~Nil~~---~~~~~kl~df~~~~~~~~~~~~~~~~~t~~y~aPE~l~~~~~~~~~DiwSlG~~l~ell~g~~  216 (355)
T d2b1pa1         140 IIHRDLKPSNIVVK---SDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKI  216 (355)
T ss_dssp             CCCSCCCGGGEEEC---TTCCEEECCCCC---------------CCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSC
T ss_pred             cccccCCccccccc---cccceeeechhhhhccccccccccccccccccChhhhcCCCCCCCcccccccchHHHHhhCCC
Confidence            99999999999999   578899999999987776666677789999999999875 46899999999999999999999


Q ss_pred             CCCCCChhHHHHHHHhcCC----------------------CCCCCCC----------------CCCCHHHHHHHHHhcc
Q 014171          166 PFWDKTEDGIFKEVLRNKP----------------------DFRRKPW----------------PSISNSAKDFVKKLLV  207 (429)
Q Consensus       166 pf~~~~~~~~~~~i~~~~~----------------------~~~~~~~----------------~~~~~~~~~li~~~l~  207 (429)
                      ||.+.+......++.....                      ......+                ...++++++||.+||.
T Consensus       217 pF~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~  296 (355)
T d2b1pa1         217 LFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLV  296 (355)
T ss_dssp             SSCCSSHHHHHHHHHHHHCCCCHHHHTTSCHHHHHHHHTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSC
T ss_pred             CCCCCCHHHHHHHHHHhccCCCHHHHHHhhhhHHHHhhcCccccccccccccccccccccccccccCCHHHHHHHHHHCc
Confidence            9988877666555443211                      1110000                0135678999999999


Q ss_pred             CCccCcCCHHHHhCCCccccC
Q 014171          208 KDPRARLTAAQALSHPWVREG  228 (429)
Q Consensus       208 ~dp~~R~s~~e~l~h~~~~~~  228 (429)
                      .||++||||+|+|+||||+..
T Consensus       297 ~dP~~R~ta~elL~Hpw~~~~  317 (355)
T d2b1pa1         297 IDPAKRISVDDALQHPYINVW  317 (355)
T ss_dssp             SSTTTSCCHHHHHTSTTTGGG
T ss_pred             CChhHCcCHHHHhcCcccCCC
Confidence            999999999999999999874

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.9e-37  Score=289.45  Aligned_cols=194  Identities=22%  Similarity=0.298  Sum_probs=160.1

Q ss_pred             ccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhc--------------CCCCCHHHHHHHHHHH
Q 014171           10 RSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKK--------------DSRYTEKDAAVVVRQM   75 (429)
Q Consensus        10 ~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~--------------~~~l~~~~~~~i~~qi   75 (429)
                      +|+|++.+.+++..            +...|+|||||++|+|.+++...+              ...+++.++..++.||
T Consensus        77 ~HpnIv~~~~~~~~------------~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi  144 (299)
T d1fgka_          77 KHKNIINLLGACTQ------------DGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQV  144 (299)
T ss_dssp             CCTTBCCEEEEECS------------SSSCEEEECCCTTCBHHHHHHTTSCC------------CCCCCHHHHHHHHHHH
T ss_pred             CCCeEEeccccccc------------CCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCccccCCHHHHHHHHHHH
Confidence            56666666655542            234568999999999999996553              2458999999999999


Q ss_pred             HHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc---ccccccCCccccccccc-CCCCCCcchH
Q 014171           76 LRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESDVW  151 (429)
Q Consensus        76 l~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~~~-~~~~~~~Diw  151 (429)
                      +.||+|||++||+||||||+|||++   .++.+||+|||+++.......   .....|++.|+|||.+. +.++.++|||
T Consensus       145 ~~al~ylH~~~ivHrDiKp~NiLl~---~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~y~~k~Diw  221 (299)
T d1fgka_         145 ARGMEYLASKKCIHRDLAARNVLVT---EDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVW  221 (299)
T ss_dssp             HHHHHHHHHTTCCCSCCSGGGEEEC---TTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGGSCHHHHHHCCCCHHHHHH
T ss_pred             HHHHHHhhhCCEEeeeecccceeec---CCCCeEeccchhhccccccccccccccCCCChhhhhhhHhcCCCCCchhhhH
Confidence            9999999999999999999999998   578999999999987654332   23457889999999886 5679999999


Q ss_pred             HHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          152 SIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       152 slG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      |+||++|+|++ |.+||.+.+.......+..+.. +  ..+..+++++++||.+||+.||.+|||+.++++
T Consensus       222 S~Gvvl~ell~~g~~p~~~~~~~~~~~~i~~~~~-~--~~p~~~~~~l~~li~~cl~~dP~~Rps~~eil~  289 (299)
T d1fgka_         222 SFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHR-M--DKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVE  289 (299)
T ss_dssp             HHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCC-C--CCCSSCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             HhHHHHHHhccCCCCCCCCCCHHHHHHHHHcCCC-C--CCCccchHHHHHHHHHHccCCHhHCcCHHHHHH
Confidence            99999999998 7889988888877776665432 2  233568999999999999999999999999975

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.5e-38  Score=294.45  Aligned_cols=179  Identities=21%  Similarity=0.230  Sum_probs=150.7

Q ss_pred             cceeEeeecCCCChHHHHHhh--------------cCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecC
Q 014171           38 RKLRRIRLCEGGELLDRILAK--------------KDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK  103 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~--------------~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~  103 (429)
                      ..|+|||||+||+|.+++...              ....+++..+..++.||+.||.|||++||+||||||+|||++   
T Consensus        85 ~~~iV~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~~lH~~~iiHrDlkp~NIL~~---  161 (309)
T d1fvra_          85 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVG---  161 (309)
T ss_dssp             EEEEEECCCTTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC---
T ss_pred             eeEEEEEecCCCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHHHHHHHHHHhhhcCCccccccccceEEEc---
Confidence            457899999999999998643              246799999999999999999999999999999999999999   


Q ss_pred             CCCCEEEeecccceeccCCCcccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhhCC-CCCCCCChhHHHHHHHh
Q 014171          104 EDSSLKATDFGLSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGR-RPFWDKTEDGIFKEVLR  181 (429)
Q Consensus       104 ~~~~~kL~Dfg~a~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~g~-~pf~~~~~~~~~~~i~~  181 (429)
                      ..+.+||+|||+|+............||+.|+|||.+. +.++.++|||||||++|+|++|. +||.+.+..+....+..
T Consensus       162 ~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~  241 (309)
T d1fvra_         162 ENYVAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ  241 (309)
T ss_dssp             GGGCEEECCTTCEESSCEECCC----CCTTTCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGG
T ss_pred             CCCceEEccccccccccccccccceecCCcccchHHhccCCCCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHh
Confidence            47899999999998765544445567899999999986 45688999999999999999965 57888888887777766


Q ss_pred             cCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          182 NKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       182 ~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      +..   ...+..+++++++||.+||+.||++|||+++++++
T Consensus       242 ~~~---~~~~~~~~~~~~~li~~cl~~dP~~RPs~~eil~~  279 (309)
T d1fvra_         242 GYR---LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVS  279 (309)
T ss_dssp             TCC---CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             cCC---CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHH
Confidence            532   23345789999999999999999999999999975

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.5e-37  Score=287.01  Aligned_cols=188  Identities=23%  Similarity=0.382  Sum_probs=150.8

Q ss_pred             ccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccc
Q 014171           37 LRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLS  116 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a  116 (429)
                      ...++|++++.|++|..++..  .+.+++..++.++.|++.||+|||++||+||||||+|||++   ..+.+||+|||.|
T Consensus        74 ~~~~iv~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~q~~~aL~~lH~~~IvHrDiKP~NIli~---~~~~~kl~DFG~a  148 (292)
T d1unla_          74 KKLTLVFEFCDQDLKKYFDSC--NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLIN---RNGELKLANFGLA  148 (292)
T ss_dssp             SEEEEEEECCSEEHHHHHHHT--TTCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEC---TTCCEEECCCTTC
T ss_pred             cceeEEeeecccccccccccc--ccccchhHHHHHHHHHHHHHHHhhcCCEeeecccCcccccc---cCCceeeeecchh
Confidence            345689999999988877643  47899999999999999999999999999999999999998   4778999999999


Q ss_pred             eeccCCCc-ccccccCCcccccccccCC--CCCCcchHHHHHHHHHHhhCCCCCCC-CChhHHHHHHHhcCCCC------
Q 014171          117 DFIKPGKK-FQDIVGSAYYVAPEVLKRK--SGPESDVWSIGVITYILLCGRRPFWD-KTEDGIFKEVLRNKPDF------  186 (429)
Q Consensus       117 ~~~~~~~~-~~~~~g~~~y~aPE~~~~~--~~~~~DiwslG~il~~l~~g~~pf~~-~~~~~~~~~i~~~~~~~------  186 (429)
                      ........ .....+++.|+|||++.+.  ++.++||||+||++|+|++|+.||.. .+..+....+.......      
T Consensus       149 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (292)
T d1unla_         149 RAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWP  228 (292)
T ss_dssp             EECCSCCSCCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCT
T ss_pred             hcccCCCccceeeccccchhhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhh
Confidence            87765433 3344677889999988643  48899999999999999999998654 44454455443321111      


Q ss_pred             -------------------CCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          187 -------------------RRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       187 -------------------~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                                         .....+.+++.+++||.+||+.||.+||||+|+|+||||++..
T Consensus       229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~mL~~dP~~R~sa~e~L~Hp~f~~~~  290 (292)
T d1unla_         229 SMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISAEEALQHPYFSDFC  290 (292)
T ss_dssp             TGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHTTSGGGSSCS
T ss_pred             hhhhcccccccccccccchhhhccccCCHHHHHHHHHHccCChhHCcCHHHHhcChhhcCCC
Confidence                               0112345788999999999999999999999999999998753

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1.2e-36  Score=284.40  Aligned_cols=179  Identities=18%  Similarity=0.202  Sum_probs=149.5

Q ss_pred             ccceeEeeecCCCChHHHHHhhc----------------------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCC
Q 014171           37 LRKLRRIRLCEGGELLDRILAKK----------------------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKP   94 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~----------------------~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp   94 (429)
                      ...++|||||.+|+|.+++....                      ...+++..+..++.||+.||+|||++||+||||||
T Consensus        89 ~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~gl~ylH~~~ivHrDlKp  168 (301)
T d1lufa_          89 KPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLAT  168 (301)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSG
T ss_pred             CceEEEEEecCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHHHHHHHHhhhcccCCeEeeEEcc
Confidence            34568999999999999996432                      23489999999999999999999999999999999


Q ss_pred             CcEEEeecCCCCCEEEeecccceeccCCC---cccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhCC-CCCCC
Q 014171           95 ENFLFKSAKEDSSLKATDFGLSDFIKPGK---KFQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCGR-RPFWD  169 (429)
Q Consensus        95 ~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~---~~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g~-~pf~~  169 (429)
                      +|||++   .++.+||+|||+|+......   ......|++.|+|||.+.+ .++.++||||+||++|+|++|. +||.+
T Consensus       169 ~NILld---~~~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~t~ksDVwS~Gvvl~ell~~~~~p~~~  245 (301)
T d1lufa_         169 RNCLVG---ENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG  245 (301)
T ss_dssp             GGEEEC---GGGCEEECCCSCHHHHTGGGCBC----CCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTT
T ss_pred             cceEEC---CCCcEEEccchhheeccCCccccccCCCCcCcCcCCHHHHccCCCChhhhhccchhhHHHHHccCCCCCCC
Confidence            999999   47889999999998654332   2235678899999999875 5789999999999999999985 68888


Q ss_pred             CChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          170 KTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       170 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      .+..+....+..+...   +.+..+++++.+||.+||+.||.+|||+.++++
T Consensus       246 ~~~~e~~~~v~~~~~~---~~p~~~~~~~~~li~~cl~~~P~~RPt~~ev~~  294 (301)
T d1lufa_         246 MAHEEVIYYVRDGNIL---ACPENCPLELYNLMRLCWSKLPADRPSFCSIHR  294 (301)
T ss_dssp             SCHHHHHHHHHTTCCC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             CCHHHHHHHHHcCCCC---CCCccchHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            8888888888776532   233578999999999999999999999999863

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.1e-36  Score=283.45  Aligned_cols=198  Identities=20%  Similarity=0.206  Sum_probs=155.0

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHG   86 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~   86 (429)
                      +.++|+|++++++.+..           .+...++|||||++|+|.+++... ...+++..+..++.|++.||.|||+.|
T Consensus        83 ~~l~HpnIv~~~g~~~~-----------~~~~~~lv~E~~~~g~l~~~~~~~-~~~~~~~~~~~i~~qia~gL~~lH~~~  150 (311)
T d1r0pa_          83 KDFSHPNVLSLLGICLR-----------SEGSPLVVLPYMKHGDLRNFIRNE-THNPTVKDLIGFGLQVAKGMKFLASKK  150 (311)
T ss_dssp             HTCCCTTBCCCCEEEEE-----------TTTEEEEEEECCTTCBHHHHHHCT-TCCCBHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HhCCCCCEeEEeEEEEe-----------cCCceEEEEEEeecCchhhhhccc-cccchHHHHHHHHHHHHHhhhhhcccC
Confidence            45566676666654321           122356899999999999987644 456889999999999999999999999


Q ss_pred             CeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc-----ccccccCCccccccccc-CCCCCCcchHHHHHHHHHH
Q 014171           87 LVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK-----FQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYIL  160 (429)
Q Consensus        87 i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~-----~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l  160 (429)
                      |+||||||+|||++   .++.+||+|||+++.......     .....||+.|+|||.+. +.++.++||||||+++|+|
T Consensus       151 iiHrDLK~~NILl~---~~~~~kL~DFG~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~ksDI~SfGivl~El  227 (311)
T d1r0pa_         151 FVHRDLAARNCMLD---EKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWEL  227 (311)
T ss_dssp             CCCSCCSGGGEEEC---TTCCEEECSSGGGCCTTTTTCCCTTCTTCSSCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred             cccCCccHHhEeEC---CCCCEEEecccchhhccccccccceecccccccccccChHHHhcCCCCChhHhhhhHHHHHHH
Confidence            99999999999998   578999999999987654322     22346889999999886 5678999999999999999


Q ss_pred             hhCCCCCCCC-ChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCC
Q 014171          161 LCGRRPFWDK-TEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALSH  222 (429)
Q Consensus       161 ~~g~~pf~~~-~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h  222 (429)
                      +||..||... +.......+..+....   ..+.+++++.+||.+||+.||.+|||+.|+++|
T Consensus       228 ~t~~~p~~~~~~~~~~~~~i~~g~~~~---~p~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~  287 (311)
T d1r0pa_         228 MTRGAPPYPDVNTFDITVYLLQGRRLL---QPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSR  287 (311)
T ss_dssp             HTTSCCSCC------CHHHHHTTCCCC---CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred             HHCCCCCCCCCCHHHHHHHHHcCCCCC---CcccCcHHHHHHHHHHcCCCHhHCcCHHHHHHH
Confidence            9977777554 3344455555554322   234688999999999999999999999999987

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-36  Score=282.58  Aligned_cols=185  Identities=19%  Similarity=0.249  Sum_probs=154.4

Q ss_pred             ccceeEeeecCCCChHHHHHhhc--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCE
Q 014171           37 LRKLRRIRLCEGGELLDRILAKK--------DSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSL  108 (429)
Q Consensus        37 ~~~~lv~e~~~gg~L~~~l~~~~--------~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~  108 (429)
                      ...++|||||.+|+|.+++...+        ...+++..+..++.|++.||.|||+++|+||||||+|||++   .++++
T Consensus        96 ~~~~lv~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ia~gl~~LH~~~ivHrDlk~~NiLld---~~~~~  172 (308)
T d1p4oa_          96 QPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVA---EDFTV  172 (308)
T ss_dssp             SSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEEC---TTCCE
T ss_pred             CceeEEEeecCCCCHHHHHHhcccccccccccCCCCHHHHHHHHHHHHHHHHHHhhCCeeeceEcCCceeec---CCceE
Confidence            34578999999999999986542        13478999999999999999999999999999999999998   57899


Q ss_pred             EEeecccceeccCCCc---ccccccCCcccccccccC-CCCCCcchHHHHHHHHHHhhC-CCCCCCCChhHHHHHHHhcC
Q 014171          109 KATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLKR-KSGPESDVWSIGVITYILLCG-RRPFWDKTEDGIFKEVLRNK  183 (429)
Q Consensus       109 kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~~~~-~~~~~~DiwslG~il~~l~~g-~~pf~~~~~~~~~~~i~~~~  183 (429)
                      ||+|||+|+.......   .....||+.|+|||.+.+ .++.++||||+||++|+|+|| .+||.+.+..+....+..+.
T Consensus       173 Kl~DFGla~~~~~~~~~~~~~~~~~t~~y~aPe~l~~~~~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~~  252 (308)
T d1p4oa_         173 KIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGG  252 (308)
T ss_dssp             EECCTTCCCGGGGGGCEEGGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTC
T ss_pred             EEeecccceeccCCcceeeccceecccccCCHHHHccCCCCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCC
Confidence            9999999986643322   233468999999999874 568899999999999999998 58888888888888887665


Q ss_pred             CCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC------CCcccc
Q 014171          184 PDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS------HPWVRE  227 (429)
Q Consensus       184 ~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~------h~~~~~  227 (429)
                      ..   ..++.+++.+.++|.+||+.||.+|||++++++      +|+|++
T Consensus       253 ~~---~~p~~~~~~l~~li~~cl~~~P~~RPs~~~il~~L~~~~~~~~~~  299 (308)
T d1p4oa_         253 LL---DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEMEPGFRE  299 (308)
T ss_dssp             CC---CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSCTTHHH
T ss_pred             CC---CCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhcCCCCcC
Confidence            32   223568999999999999999999999999987      555543

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.3e-36  Score=280.16  Aligned_cols=195  Identities=23%  Similarity=0.268  Sum_probs=156.6

Q ss_pred             ccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhc----------------CCCCCHHHHHHHHH
Q 014171           10 RSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKK----------------DSRYTEKDAAVVVR   73 (429)
Q Consensus        10 ~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~----------------~~~l~~~~~~~i~~   73 (429)
                      +|+|++.+.+.+..            +...|+|||||+||+|.+++....                ...+++..+..++.
T Consensus        85 ~HpnIv~~~g~~~~------------~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  152 (311)
T d1t46a_          85 NHMNIVNLLGACTI------------GGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSY  152 (311)
T ss_dssp             CCTTBCCEEEEECS------------SSSCEEEEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHH
T ss_pred             CCCCEEEEEEEEee------------CCEEEEEEEcCCCCCHHHHHHhccccccccccccccccccccCCCHHHHHHHHH
Confidence            45555555554432            233578999999999999997653                23589999999999


Q ss_pred             HHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCCc---ccccccCCccccccccc-CCCCCCcc
Q 014171           74 QMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGKK---FQDIVGSAYYVAPEVLK-RKSGPESD  149 (429)
Q Consensus        74 qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~~---~~~~~g~~~y~aPE~~~-~~~~~~~D  149 (429)
                      ||+.||+|||++||+||||||+||+++   ..+.+|++|||.++.......   .....||+.|+|||++. +.++.++|
T Consensus       153 qi~~gl~~LH~~~ivHrDLKp~NIl~~---~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~D  229 (311)
T d1t46a_         153 QVAKGMAFLASKNCIHRDLAARNILLT---HGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESD  229 (311)
T ss_dssp             HHHHHHHHHHHTTCCCSCCSGGGEEEE---TTTEEEECCCGGGSCTTSCTTSEECSSSEECGGGCCHHHHHHCCCCHHHH
T ss_pred             HHHHHHHHHHhCCeeeccccccccccc---ccCcccccccchheeccCCCcceEeeecccChHHcCHHHhcCCCCCCccc
Confidence            999999999999999999999999998   578999999999987654332   23457899999999987 45689999


Q ss_pred             hHHHHHHHHHHhh-CCCCCCCCChhHHHHHHHhcCCCCCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHhC
Q 014171          150 VWSIGVITYILLC-GRRPFWDKTEDGIFKEVLRNKPDFRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQALS  221 (429)
Q Consensus       150 iwslG~il~~l~~-g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~  221 (429)
                      ||||||++|+|+| |.+||.+.+..+.+.++........  ....+++.+.+||.+||+.||.+|||++++++
T Consensus       230 IwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~l~~Li~~cl~~dP~~RPs~~~il~  300 (311)
T d1t46a_         230 VWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRML--SPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQ  300 (311)
T ss_dssp             HHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCC--CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred             ccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCC--CcccccHHHHHHHHHHcCCChhHCcCHHHHHH
Confidence            9999999999998 6666767676666666655543322  23467999999999999999999999999884

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=1e-35  Score=277.97  Aligned_cols=191  Identities=17%  Similarity=0.204  Sum_probs=146.5

Q ss_pred             cccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeeccc
Q 014171           36 PLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGL  115 (429)
Q Consensus        36 ~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~  115 (429)
                      ....++|||||. |+|...+.. ....+++..+..++.|++.||+|||++||+||||||+||+++..+.+..++|+|||+
T Consensus        75 ~~~~~ivme~~~-~~l~~~~~~-~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~  152 (299)
T d1ckia_          75 GDYNVMVMELLG-PSLEDLFNF-CSRKFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGL  152 (299)
T ss_dssp             TTEEEEEEECCC-CBHHHHHHH-TTTCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSS
T ss_pred             CCEEEEEEEEcC-Cchhhhhhh-ccCCCcHHHHHHHHHHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCc
Confidence            344678999994 667665543 346899999999999999999999999999999999999998655677899999999


Q ss_pred             ceeccCCC--------cccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCCCCCCCChhHHHHHHH---hcC
Q 014171          116 SDFIKPGK--------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTEDGIFKEVL---RNK  183 (429)
Q Consensus       116 a~~~~~~~--------~~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~---~~~  183 (429)
                      |+......        ......||+.|+|||++.+. ++.++||||+||++|+|++|+.||.+.........+.   ...
T Consensus       153 a~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~~l~el~tg~~P~~~~~~~~~~~~~~~~~~~~  232 (299)
T d1ckia_         153 AKKYRDARTHQHIPYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKK  232 (299)
T ss_dssp             CEECBCTTTCCBCCCCBCCSCCCCSSSCCHHHHTTBCCCHHHHHHHHHHHHHHHHHSSCTTCCCC-------HHHHHHHH
T ss_pred             ceeccccccccceeccccCCcCCCccccCHHHHhCCCCCChhhEEecCHHHHHHHhCCCcccccchHHHHHHHHHhhccc
Confidence            98765432        22456799999999998764 6899999999999999999999998765543332221   111


Q ss_pred             CCC-CCCCCCCCCHHHHHHHHHhccCCccCcCCHH---HHhCCCccccC
Q 014171          184 PDF-RRKPWPSISNSAKDFVKKLLVKDPRARLTAA---QALSHPWVREG  228 (429)
Q Consensus       184 ~~~-~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~---e~l~h~~~~~~  228 (429)
                      ... .+...+.+|+++.++|.+||+.+|.+||+++   ++|+|+|.+..
T Consensus       233 ~~~~~~~~~~~~p~~~~~li~~cl~~~p~~RP~~~~i~~~l~~~~~~~~  281 (299)
T d1ckia_         233 MSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLFHRQG  281 (299)
T ss_dssp             HHSCHHHHTTTSCHHHHHHHHHHHHSCTTCCCCHHHHHHHHHHHHHHHT
T ss_pred             CCCChhHhccCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHHHcC
Confidence            111 1112346899999999999999999999987   45778776554

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-35  Score=276.91  Aligned_cols=201  Identities=20%  Similarity=0.181  Sum_probs=146.3

Q ss_pred             cccccccccccccccccCCCCCCcceeeccccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHH--
Q 014171            7 GDTRSANCLDMVNLVTPMLPPTRPMEIVLPLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHL--   84 (429)
Q Consensus         7 ~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~--   84 (429)
                      ..++|+|++++++.+......  .      ...|+|||||++|+|.+++.+.   .+++.....++.|++.||.|||+  
T Consensus        52 ~~~~HpnIv~~~~~~~~~~~~--~------~~~~lv~Ey~~~g~L~~~l~~~---~l~~~~~~~~~~~ia~gl~~lH~~~  120 (303)
T d1vjya_          52 VMLRHENILGFIAADNKDNGT--W------TQLWLVSDYHEHGSLFDYLNRY---TVTVEGMIKLALSTASGLAHLHMEI  120 (303)
T ss_dssp             TTCCCTTBCCEEEEEEEECSS--S------EEEEEEEECCTTCBHHHHHHHC---CBCHHHHHHHHHHHHHHHHHHHCCB
T ss_pred             hhCCCCcCcceEEEEEeCCCc--c------eEEEEEEecccCCCHHHHHhcC---CCCHHHHHHHHHHHHHHHHHHHHhh
Confidence            346777777777765432111  0      1236899999999999999653   69999999999999999999996  


Q ss_pred             ------CCCeecCCCCCcEEEeecCCCCCEEEeecccceeccCCC-----cccccccCCcccccccccCC-------CCC
Q 014171           85 ------HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSDFIKPGK-----KFQDIVGSAYYVAPEVLKRK-------SGP  146 (429)
Q Consensus        85 ------~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~~~~~~~-----~~~~~~g~~~y~aPE~~~~~-------~~~  146 (429)
                            +||+||||||+|||++   .++.+||+|||++.......     ......||+.|+|||++.+.       ++.
T Consensus       121 ~~~~~~~~IvHrDlKp~NILl~---~~~~~Kl~DFGl~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~  197 (303)
T d1vjya_         121 VGTQGKPAIAHRDLKSKNILVK---KNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKHFESFK  197 (303)
T ss_dssp             CSTTCBCEEECSCCCGGGEEEC---TTSCEEECCCTTCEEEETTTTEECC----CCSCGGGCCHHHHTTCSCTTCHHHHH
T ss_pred             hhhccCCCeeccccCccceEEc---CCCCeEEEecCccccccCCCcceeccccceecccCcCChhhccccccccCCCcCc
Confidence                  5999999999999998   57899999999998775433     22456899999999998653       356


Q ss_pred             CcchHHHHHHHHHHhhCCCCCCCCC---------------hhHHHHHHHhcCCCCCC-CCC--CCCCHHHHHHHHHhccC
Q 014171          147 ESDVWSIGVITYILLCGRRPFWDKT---------------EDGIFKEVLRNKPDFRR-KPW--PSISNSAKDFVKKLLVK  208 (429)
Q Consensus       147 ~~DiwslG~il~~l~~g~~pf~~~~---------------~~~~~~~i~~~~~~~~~-~~~--~~~~~~~~~li~~~l~~  208 (429)
                      ++|||||||++|+|+||..||....               .......+......... ..+  ......+.+|+.+||+.
T Consensus       198 k~Di~S~Gvvl~el~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~li~~cl~~  277 (303)
T d1vjya_         198 RADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYA  277 (303)
T ss_dssp             HHHHHHHHHHHHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGGCHHHHHHHHHHHTTCCS
T ss_pred             chhhhhhHHHHHHHhhCCCCCCcccccccchhhcccccchHHHHHHHHhccccCCCCCcccCChHHHHHHHHHHHHHccc
Confidence            7999999999999999988763221               11222222222211110 000  11224588999999999


Q ss_pred             CccCcCCHHHHhC
Q 014171          209 DPRARLTAAQALS  221 (429)
Q Consensus       209 dp~~R~s~~e~l~  221 (429)
                      ||.+|||+.|+++
T Consensus       278 dp~~Rps~~ei~~  290 (303)
T d1vjya_         278 NGAARLTALRIKK  290 (303)
T ss_dssp             SGGGSCCHHHHHH
T ss_pred             CHhHCcCHHHHHH
Confidence            9999999999875

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=100.00  E-value=2.8e-34  Score=267.03  Aligned_cols=183  Identities=20%  Similarity=0.268  Sum_probs=143.5

Q ss_pred             cccceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecC--CCCCEEEeec
Q 014171           36 PLRKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAK--EDSSLKATDF  113 (429)
Q Consensus        36 ~~~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~--~~~~~kL~Df  113 (429)
                      ....|+||||| ||+|.+++... +..+++..+..++.|++.||+|||++||+||||||+||+++...  ..+.+||+||
T Consensus        73 ~~~~~~vme~~-~~~l~~~~~~~-~~~~~~~~~~~i~~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DF  150 (293)
T d1csna_          73 GLHNVLVIDLL-GPSLEDLLDLC-GRKFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDF  150 (293)
T ss_dssp             TTEEEEEEECC-CCBHHHHHHHT-TTCCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCC
T ss_pred             CCccEEEEEec-CCCHHHHHHhh-ccchhhHHHHHHHHHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEccc
Confidence            34468999999 68999887543 46799999999999999999999999999999999999997532  3578999999


Q ss_pred             ccceeccCCC--------cccccccCCcccccccccCC-CCCCcchHHHHHHHHHHhhCCCCCCCCChh---HHHHHHHh
Q 014171          114 GLSDFIKPGK--------KFQDIVGSAYYVAPEVLKRK-SGPESDVWSIGVITYILLCGRRPFWDKTED---GIFKEVLR  181 (429)
Q Consensus       114 g~a~~~~~~~--------~~~~~~g~~~y~aPE~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~---~~~~~i~~  181 (429)
                      |+|+......        .....+||+.|+|||++.+. ++.++||||+||++|+|++|+.||.+....   .....+..
T Consensus       151 G~a~~~~~~~~~~~~~~~~~~~~~GT~~y~aPE~~~~~~~~~~~DiwSlG~~l~elltg~~Pf~~~~~~~~~~~~~~i~~  230 (293)
T d1csna_         151 GMVKFYRDPVTKQHIPYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYERIGE  230 (293)
T ss_dssp             TTCEESBCTTTCCBCCCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSSCCSCCHHHHHHHHHH
T ss_pred             ceeEEcccCccccceeecccCceEEchhhcCHHHhcCCCCChHHHHHHhhHHHHHHHhCCCcCCCccchhHHHHHHHHHh
Confidence            9998764321        23456799999999998764 688999999999999999999999765433   22333322


Q ss_pred             cCCC-CCCCCCCCCCHHHHHHHHHhccCCccCcCCHHHHh
Q 014171          182 NKPD-FRRKPWPSISNSAKDFVKKLLVKDPRARLTAAQAL  220 (429)
Q Consensus       182 ~~~~-~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l  220 (429)
                      .... ......+.+|+++.+++..|+..+|.+||+++.+.
T Consensus       231 ~~~~~~~~~l~~~~p~~l~~ii~~~~~~~~~~rP~y~~l~  270 (293)
T d1csna_         231 KKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQ  270 (293)
T ss_dssp             HHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHH
T ss_pred             ccCCCChHHhcCCCCHHHHHHHHHHhcCCcccCcCHHHHH
Confidence            2111 11112346889999999999999999999987654

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=6.3e-32  Score=258.92  Aligned_cols=190  Identities=22%  Similarity=0.347  Sum_probs=138.0

Q ss_pred             eeEeeecCCCChHHH-HHhhcCCCCCHHHHHHHHHHHHHHHHHHHH-CCCeecCCCCCcEEEeecCCC---CCEEEeecc
Q 014171           40 LRRIRLCEGGELLDR-ILAKKDSRYTEKDAAVVVRQMLRVAAECHL-HGLVHRDMKPENFLFKSAKED---SSLKATDFG  114 (429)
Q Consensus        40 ~lv~e~~~gg~L~~~-l~~~~~~~l~~~~~~~i~~qil~aL~~lH~-~~i~H~dikp~Nil~~~~~~~---~~~kL~Dfg  114 (429)
                      ++|++++.++..... ........+++..+..++.||+.||.|||+ .||+||||||+|||++..+..   ..++++|||
T Consensus        98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg  177 (362)
T d1q8ya_          98 HVVMVFEVLGENLLALIKKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLG  177 (362)
T ss_dssp             EEEEEECCCCEEHHHHHHHTTTSCCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCT
T ss_pred             eeeeeecccccccccccccccccCCcHHHHHHHHHHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceeeEeecc
Confidence            456666665544333 344455789999999999999999999998 899999999999999853221   248999999


Q ss_pred             cceeccCCCcccccccCCccccccccc-CCCCCCcchHHHHHHHHHHhhCCCCCCCCChh------HHHHHHHh--cC--
Q 014171          115 LSDFIKPGKKFQDIVGSAYYVAPEVLK-RKSGPESDVWSIGVITYILLCGRRPFWDKTED------GIFKEVLR--NK--  183 (429)
Q Consensus       115 ~a~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~------~~~~~i~~--~~--  183 (429)
                      .|.....  .....+||+.|+|||++. ..++.++|+||+||++++|++|+.||......      ........  +.  
T Consensus       178 ~s~~~~~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~  255 (362)
T d1q8ya_         178 NACWYDE--HYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELP  255 (362)
T ss_dssp             TCEETTB--CCCSCCSCGGGCCHHHHHTCCCCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCC
T ss_pred             ccccccc--ccccccccccccChhhccccCCCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCC
Confidence            9876543  234568999999999886 45689999999999999999999999654321      11111110  00  


Q ss_pred             ----------------C----CCCC--------------CCCCCCCHHHHHHHHHhccCCccCcCCHHHHhCCCccccCC
Q 014171          184 ----------------P----DFRR--------------KPWPSISNSAKDFVKKLLVKDPRARLTAAQALSHPWVREGG  229 (429)
Q Consensus       184 ----------------~----~~~~--------------~~~~~~~~~~~~li~~~l~~dp~~R~s~~e~l~h~~~~~~~  229 (429)
                                      .    ....              ...+..++.+++||.+||..||.+|||++|+|+||||++..
T Consensus       256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~Rpta~e~L~Hp~f~~~~  335 (362)
T d1q8ya_         256 SYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWLKDTL  335 (362)
T ss_dssp             HHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHHHHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHTCGGGTTCT
T ss_pred             HHHhhcccccccccccchhhhccccccCCchhhhcccccccCcccCHHHHHHHHHHCCCChhHCcCHHHHhcCcccCCCC
Confidence                            0    0000              00112356799999999999999999999999999999765


Q ss_pred             CC
Q 014171          230 DA  231 (429)
Q Consensus       230 ~~  231 (429)
                      ..
T Consensus       336 ~~  337 (362)
T d1q8ya_         336 GM  337 (362)
T ss_dssp             TC
T ss_pred             Cc
Confidence            43

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

Probab=99.87  E-value=1.4e-22  Score=167.51  Aligned_cols=138  Identities=29%  Similarity=0.539  Sum_probs=122.9

Q ss_pred             ccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhccc
Q 014171          264 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH  343 (429)
Q Consensus       264 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~  343 (429)
                      +++++++++++++|..+|.+++|+|+.+||..++.. .|..+++..+..++..+|.+++|.|+|+||+..+........ 
T Consensus         2 ~lt~~e~~~l~~~F~~~D~~~~G~Is~~e~~~~l~~-~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~-   79 (146)
T d1exra_           2 QLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRS-LGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKEQD-   79 (146)
T ss_dssp             CCCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH-HTCCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHH-
T ss_pred             CCCHHHHHHHHHHHHHHcCCCCCeECHHHHHHHHHh-cCCCCCHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHhhccC-
Confidence            468889999999999999999999999999999965 788899999999999999999999999999987654433221 


Q ss_pred             ccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHH
Q 014171          344 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLR  407 (429)
Q Consensus       344 ~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~  407 (429)
                          ....++.+|+.+|.|++|+|+.+||+.++...+.      ++.+++.+|.|+||.|+|+||+++|.
T Consensus        80 ----~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~~~~~~~i~~~~D~d~dG~i~~~eF~~~l~  145 (146)
T d1exra_          80 ----SEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMV  145 (146)
T ss_dssp             ----HHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred             ----hHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhcCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhc
Confidence                1346889999999999999999999999987773      89999999999999999999999985

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=99.87  E-value=1.2e-22  Score=166.89  Aligned_cols=134  Identities=19%  Similarity=0.367  Sum_probs=116.3

Q ss_pred             cchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccc
Q 014171          265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD  344 (429)
Q Consensus       265 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~  344 (429)
                      ++++++++++++|..+|.|++|.|+.+||..+|. .+|..++..++..++.    +++|.|+|++|+..+......  ..
T Consensus         1 L~~~qi~e~~~~F~~~D~d~~G~I~~~el~~~l~-~lg~~~~~~el~~~~~----~~~~~i~~~eF~~~~~~~~~~--~~   73 (142)
T d1wdcb_           1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISE-QLGRAPDDKELTAMLK----EAPGPLNFTMFLSIFSDKLSG--TD   73 (142)
T ss_dssp             CCHHHHHHHHHHHHHHCTTCSSSCCHHHHHHHHH-HHSSCCCHHHHHHHHT----TSSSCCCHHHHHHHHHHHTCS--CC
T ss_pred             CCHHHHHHHHHHHHHHcCCCCCcCChHHHHHHHH-HhhcCCCHHHHHHHHH----hccCccccccccccccccccc--cc
Confidence            4788999999999999999999999999999995 5899999999988874    568999999999877644322  22


Q ss_pred             cHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          345 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       345 ~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                      .   .+.++.+|+.||+|++|+|+.+||+.++..+|.      ++++++.+|.| +|+|+|+||+++|++.
T Consensus        74 ~---~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~-~G~I~y~eF~~~l~~~  140 (142)
T d1wdcb_          74 S---EETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFKEAPVE-GGKFDYVKFTAMIKGS  140 (142)
T ss_dssp             C---HHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCCHHHHHHHHHHCCEE-TTEECHHHHHHHHHTS
T ss_pred             h---hhhHHHhhhhhcccCCCcccHHHHHHHHHHccccCCHHHHHHHHHHhCCC-CCEEcHHHHHHHHhcC
Confidence            2   246889999999999999999999999988873      89999999988 6999999999999874

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.87  E-value=4.6e-22  Score=167.37  Aligned_cols=144  Identities=28%  Similarity=0.480  Sum_probs=125.6

Q ss_pred             cccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcc
Q 014171          263 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE  342 (429)
Q Consensus       263 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~  342 (429)
                      ..++++++.+++++|..+|.|++|+|+.+||..++. ..+..+++..+..++..+|.+++|.+++.||+..+........
T Consensus        12 ~~ls~~~i~el~~~F~~~D~d~~G~Is~~el~~~l~-~~~~~~~~~~~~~~~~~~d~~~~~~~~~~e~~~~~~~~~~~~~   90 (162)
T d1topa_          12 AFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMR-MLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQMKEDA   90 (162)
T ss_dssp             HHSCHHHHHHHHHHHHTTTCSCSSEEEGGGHHHHHH-HTTCCCCHHHHHHHHHHHCTTSCCEEEHHHHHHHHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHh-ccCCchhHHHHHhhhheeccCCCCCeeeehhhhhhhhhhhhhc
Confidence            346888999999999999999999999999999995 4899999999999999999999999999999877654432221


Q ss_pred             cccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       343 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                        ...+...++.+|+.+|.|++|+|+.+||+.++...+.      +..+|+.+|.|+||.|+|+||+++|.+.
T Consensus        91 --~~~~~~~~~~aF~~~D~d~~G~Is~~e~~~~l~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~~~  161 (162)
T d1topa_          91 --KGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV  161 (162)
T ss_dssp             --HHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHTTTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHSC
T ss_pred             --ccCcHHHHHHHHHHHCCCCCCCCcHHHHHHHHHhhCCCCCHHHHHHHHHHhCCCCCCcEEHHHHHHHHHcC
Confidence              2233456889999999999999999999999988773      8899999999999999999999999874

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.86  E-value=6.4e-22  Score=165.35  Aligned_cols=145  Identities=26%  Similarity=0.475  Sum_probs=123.5

Q ss_pred             hcccchHHHhhhhccccccCCCC-CCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhh
Q 014171          262 ASTLDDEELADLRDQFDAIDVDK-NGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL  340 (429)
Q Consensus       262 ~~~~~~~~~~~l~~~F~~~D~~~-~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~  340 (429)
                      ..+++++++++++++|..+|.++ +|.|+..||..+|. .+|..++..++..++..++.+++|.+++.+|...+......
T Consensus         5 ~~~Lt~~~~~~l~~~F~~~D~d~~dG~I~~~e~~~~l~-~lg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (156)
T d1dtla_           5 VEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMR-MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRSMKD   83 (156)
T ss_dssp             GGGSCHHHHHHHHHHHHHHTTTCGGGSBCHHHHHHHHH-HTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHHC-
T ss_pred             HHHCCHHHHHHHHHHHHHHcCCCCCCeECHHHHHHHHH-HcCCCCCHHHHHHHHHHhhccCCCccchhhhhhhhhhcccc
Confidence            34678999999999999999996 89999999999995 49999999999999999999999999999998765544332


Q ss_pred             cccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          341 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       341 ~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                      ....  ...+.++.+|+.||.|++|+|+.+||++++...+.      ++.+++.+|.|+||.|+|+||+++|+++
T Consensus        84 ~~~~--~~~~~l~~~F~~~D~d~~G~I~~~e~~~~~~~~~~~ls~~e~~~i~~~~D~d~dG~I~~~eF~~~l~g~  156 (156)
T d1dtla_          84 DSKG--KSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGV  156 (156)
T ss_dssp             ------CHHHHHHHHHHHHCTTCSSEEEHHHHGGGGTTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHHC-
T ss_pred             cccc--cHHHHHHHHHHHhCcCCCCcCcHHHHHHHHhhcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHcCC
Confidence            2221  22456889999999999999999999999998874      8999999999999999999999999874

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.86  E-value=2.7e-22  Score=165.75  Aligned_cols=139  Identities=30%  Similarity=0.505  Sum_probs=123.3

Q ss_pred             cccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcc
Q 014171          263 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE  342 (429)
Q Consensus       263 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~  342 (429)
                      +.++++++.+++++|+.+|.|++|+|+.+||..++.. .|..+++..+..++...+.++.+.++|++|+..+........
T Consensus         2 ~~ls~~~i~~l~~~F~~~D~d~~G~i~~~e~~~~l~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   80 (146)
T d1lkja_           2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRS-LGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQLKSND   80 (146)
T ss_dssp             CCCCHHHHHHHHHHHHHHCCSSSSEEEHHHHHHHHHH-HTCCCCHHHHHHHHHHHCSSSCCEEEHHHHHHHHHHHTCCCC
T ss_pred             CCCCHHHHHHHHHHHHHHCCCCCCcEeHHHHHHHHHh-cCCCCCHHHHHHHHHHhccCCcccccHHHHHHHHHHhhcccc
Confidence            4678999999999999999999999999999999955 789999999999999999999999999999987654433322


Q ss_pred             cccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       343 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                           ..+.++.+|+.||+|++|+|+.+||++++...|.      ++.++..+| |+||+|+|+||+++|.+
T Consensus        81 -----~~~~~~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~~~~~~~~~~d-d~dG~I~~~eF~~~m~k  146 (146)
T d1lkja_          81 -----SEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREVS-DGSGEINIQQFAALLSK  146 (146)
T ss_dssp             -----HHHHHHHHHHHHCSSSSCEEEHHHHHHHHHHHTCSCCHHHHHHHHHHHC-CSSSEEEHHHHHHHHCC
T ss_pred             -----HHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHcCCcccHHHHHHHHHhcc-CCCCeEeHHHHHHHhCC
Confidence                 1356889999999999999999999999987774      899999999 99999999999999864

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

Probab=99.86  E-value=8.6e-22  Score=160.07  Aligned_cols=129  Identities=26%  Similarity=0.371  Sum_probs=113.6

Q ss_pred             hccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHH
Q 014171          274 RDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQ  353 (429)
Q Consensus       274 ~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~  353 (429)
                      ..+|..+|.|++|.|+..||..++. .++..+++.++..++..+|.+++|.|+|+||+..+......   ........++
T Consensus         3 e~~F~~~D~d~dG~is~~E~~~~l~-~~~~~~~~~~~~~~~~~~D~~~~g~i~~~Ef~~~~~~~~~~---~~~~~~~~~~   78 (134)
T d1jfja_           3 EALFKEIDVNGDGAVSYEEVKAFVS-KKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQ---DLSDDKIGLK   78 (134)
T ss_dssp             HHHHHHHCTTCSSEEEHHHHHHHHH-TTCCSSHHHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCC---SSHHHHHHHH
T ss_pred             HHHHHHHcCCCcCCCcHHHHHHHHH-HcCCCCCHHHHHHHHHHhhhccccccccccccccccccccc---cccccccccc
Confidence            4679999999999999999999995 48999999999999999999999999999999876543222   2233345688


Q ss_pred             HHhccccCCCCCccCHHHHHhhhcCCCC--HHHHHHHhCCCCCCcccHHHHHHHH
Q 014171          354 AAFEKFDIDRDGFITPEELRMHTGLKGS--IDPLLEEADIDKDGRISLSEFRRLL  406 (429)
Q Consensus       354 ~~F~~~D~~~~G~I~~~el~~~~~~~~~--~~~~~~~~d~~~dg~i~~~ef~~~~  406 (429)
                      .+|+.+|.+++|+|+.+|++.++...+.  +.++|..+|.|+||.|+|+||+++|
T Consensus        79 ~~F~~~D~~~~g~i~~~el~~~~~~~~~~~~~~~~~~~D~d~dG~is~~EF~~~~  133 (134)
T d1jfja_          79 VLYKLMDVDGDGKLTKEEVTSFFKKHGIEKVAEQVMKADANGDGYITLEEFLEFS  133 (134)
T ss_dssp             HHHHHHCCSSSSEEEHHHHHHHHTTTTCHHHHHHHHHHHCSSSSEEEHHHHHHHH
T ss_pred             ccccccccccCCcccHHHHHHHHHhcCcHHHHHHHHHHCCCCCCCCCHHHHHHHh
Confidence            9999999999999999999999998886  7889999999999999999999987

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.85  E-value=1.2e-21  Score=160.71  Aligned_cols=135  Identities=27%  Similarity=0.483  Sum_probs=120.5

Q ss_pred             chHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhccccc
Q 014171          266 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS  345 (429)
Q Consensus       266 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~  345 (429)
                      ++++.++++++|..+|.|++|+|+..||..++.. .|..++...+..++..+|.+++|.|++.||+..+........   
T Consensus         1 t~~~~~elk~~F~~~D~~~~G~Is~~e~~~~l~~-~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~---   76 (141)
T d2obha1           1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRA-LGFEPKKEEIKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKD---   76 (141)
T ss_dssp             CHHHHHHHHHHHHTTCTTCCSEEEGGGHHHHHHH-TTCCCCHHHHHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHH---
T ss_pred             CHHHHHHHHHHHHHHcCCCCCeEeHHHHHHHHHh-cCCchhHHHHHHHHHhhccCCCCeechHHHHHHHHHHHhhhc---
Confidence            4677889999999999999999999999999955 899999999999999999999999999999987655433221   


Q ss_pred             HHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHH
Q 014171          346 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLL  406 (429)
Q Consensus       346 ~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~  406 (429)
                        ....++.+|+.+|.+++|+|+.+||+.++...|.      +..+|+.+|.|+||.|+|+||+++|
T Consensus        77 --~~~~l~~~f~~~d~~~~G~i~~~el~~~l~~~g~~l~~~e~~~l~~~~D~d~dG~i~~~EF~~~m  141 (141)
T d2obha1          77 --TKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLRIM  141 (141)
T ss_dssp             --HHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTSSSSBCHHHHHHHH
T ss_pred             --cHHHHHHHHHHhcccCCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHCCCCCCCEeHHHHHHhC
Confidence              2356889999999999999999999999988874      8999999999999999999999986

>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.84  E-value=1.8e-21  Score=160.48  Aligned_cols=134  Identities=16%  Similarity=0.275  Sum_probs=112.8

Q ss_pred             HhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCC--CCCcccHHHHHHHHhhhhhhcccccHH
Q 014171          270 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCN--TDGLVDFSEFVAATLHVHQLEEHDSEK  347 (429)
Q Consensus       270 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~--~~g~I~~~eF~~~~~~~~~~~~~~~~~  347 (429)
                      .++++++|..+|.|++|+|+.+||..+|+ .+|..++..++..++..++.+  ++|.|+|+||+..+...........  
T Consensus         3 ~eelke~F~~~D~d~~G~I~~~el~~~l~-~lg~~~~~~e~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~--   79 (145)
T d2mysc_           3 ADDFKEAFLLFDRTGDAKITASQVGDIAR-ALGQNPTNAEINKILGNPSKEEMNAAAITFEEFLPMLQAAANNKDQGT--   79 (145)
T ss_pred             HHHHHHHHHHHcCCCCCeECHHHHHHHHH-HhhhcchhhhhHHHHHHHhhcccccCccchhHHHHHHhhhhhccccch--
Confidence            35688899999999999999999999994 589999999999999987665  5889999999987755433322221  


Q ss_pred             HHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          348 WHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       348 ~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                       ...+..+|+.+|+|++|+|+.+||++++..+|.      ++.+++ .|.|+||.|+|+||+++|..
T Consensus        80 -~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~-~~~d~dG~I~y~eF~~~ll~  144 (145)
T d2mysc_          80 -FEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMK-GQEDSNGCINYEAFVKHIMS  144 (145)
T ss_pred             -HHHHHHHHHHhhcCCCCEEcHHHHHHHHHHhCCCCCHHHHHHHHh-hcCCCCCeEEHHHHHHHHhc
Confidence             345889999999999999999999999998874      788887 48899999999999998854

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=99.84  E-value=1.5e-21  Score=162.36  Aligned_cols=138  Identities=22%  Similarity=0.397  Sum_probs=116.5

Q ss_pred             cchHHHhhhhccccccCC--CCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcc
Q 014171          265 LDDEELADLRDQFDAIDV--DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE  342 (429)
Q Consensus       265 ~~~~~~~~l~~~F~~~D~--~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~  342 (429)
                      ++++|+++++++|..+|.  |++|+|+..||..+| +.+|..+++.++..+. ..+.+++|.|+|+||+.++........
T Consensus         1 Ls~eqi~~l~~~F~~fD~~~~~dG~I~~~el~~~l-~~lG~~~t~~e~~~~~-~~~~~~~~~i~~~eFl~~~~~~~~~~~   78 (152)
T d1wdcc_           1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVC-RCLGINPRNEDVFAVG-GTHKMGEKSLPFEEFLPAYEGLMDCEQ   78 (152)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTCSSSCEEGGGHHHHH-HHTTCCCCHHHHHHTT-CCSSTTSCEECHHHHHHHHHHHTTSCC
T ss_pred             CCHHHHHHHHHHHHHHCcCCCCCCeECHHHHHHHH-HHhccCccHhhhhhhh-hhhccccccccccccccccccccccch
Confidence            467889999999999994  889999999999999 5599999999998764 467888999999999988765543322


Q ss_pred             cccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCC--CCCcccHHHHHHHHHh
Q 014171          343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADID--KDGRISLSEFRRLLRT  408 (429)
Q Consensus       343 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~--~dg~i~~~ef~~~~~~  408 (429)
                      ..    ...++++|+.||.+++|+|+.+||+.++..+|.      ++.+++.+|.+  ++|.|+|+||++.|..
T Consensus        79 ~~----~~~l~~aF~~~D~~~~G~I~~~el~~~l~~~g~~ls~~e~~~l~~~~d~~~d~~G~I~y~eF~~~~~~  148 (152)
T d1wdcc_          79 GT----FADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYEDFVKKVMA  148 (152)
T ss_dssp             CC----HHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHHHHTCCCCTTSEEEHHHHHHHHHH
T ss_pred             hH----HHhhhhhhhccccccCccchHHHHHHHHHHcCCCCCHHHHHHHHHHhccCCCCCCEEEHHHHHHHHhc
Confidence            21    245889999999999999999999999988874      89999999864  5689999999998864

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Cdc4p
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.84  E-value=1.5e-21  Score=159.93  Aligned_cols=129  Identities=20%  Similarity=0.321  Sum_probs=110.4

Q ss_pred             hhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHH
Q 014171          271 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL  350 (429)
Q Consensus       271 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~  350 (429)
                      .+.+++|..+|.|++|.|+.+||..+| +.+|..++..++..+    +.+.+|.|+|++|+..+...........   ..
T Consensus         5 ~~fke~F~~~D~d~dG~I~~~el~~~l-~~lg~~~t~~ei~~~----~~~~~~~i~~~eF~~~~~~~~~~~~~~~---~~   76 (140)
T d1ggwa_           5 SPYKQAFSLFDRHGTGRIPKTSIGDLL-RACGQNPTLAEITEI----ESTLPAEVDMEQFLQVLNRPNGFDMPGD---PE   76 (140)
T ss_dssp             TTTHHHHHHTCSSSSSEECHHHHHHHH-HHTSCCCCHHHHHHH----HTTSCSSEEHHHHHHHHCTTSSSSSSCC---HH
T ss_pred             HHHHHHHHHHCCCCCCeECHHHHHHHH-HHHHhhhHHHhhhhh----hccccccccchhhhhhhhhhhhcchhhH---HH
Confidence            678899999999999999999999999 459999999887654    6788999999999998765444333222   24


Q ss_pred             HHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          351 RSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       351 ~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                      .++++|+.+|++++|+|+.+||++++...|.      ++.+++.+|.| ||.|+|+||+++|..
T Consensus        77 ~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~lt~~e~~~l~~~~d~~-dG~I~y~eF~~~m~s  139 (140)
T d1ggwa_          77 EFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPVK-DGMVNYHDFVQMILA  139 (140)
T ss_dssp             HHHHHHHTTCSSCSSCCCHHHHHHHHHHHHSCSCHHHHHHHHHHTTCS-SCCSTTTHHHHHHHC
T ss_pred             HHHHHHHHHhccCCCcchHHHHHHHHHHcCCCCCHHHHHHHHHhhCCC-CCEEeHHHHHHHHhc
Confidence            5889999999999999999999999987763      89999999988 999999999999864

>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=99.84  E-value=1.1e-21  Score=168.12  Aligned_cols=141  Identities=34%  Similarity=0.630  Sum_probs=125.3

Q ss_pred             cccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcc
Q 014171          263 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE  342 (429)
Q Consensus       263 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~  342 (429)
                      ..++++++++++++|+.+|.|++|+|+.+||..+|. .++..++..+++.+++.+|.+++|.|+|.+|+..+........
T Consensus         2 ~~Lt~~ei~~l~~~F~~~D~d~dG~Is~~e~~~~l~-~l~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~   80 (182)
T d1s6ia_           2 ERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLK-RVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLER   80 (182)
T ss_dssp             CSSSCTTTCSHHHHHHTTSSSSSSCEEHHHHHHHHT-TTTCCCCHHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCC
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCcCCCCHHHHHHHHH-HcCCccccccchhhhhhhhccccccchHHHHHHHHHhhccccc
Confidence            457888899999999999999999999999999995 5899999999999999999999999999999987655544433


Q ss_pred             cccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC----CHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       343 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~----~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      .      +.++.+|+.+|.+++|+|+.+||++++...+    +++.+|+.+|.|+||.|+|+||+++|++.-
T Consensus        81 ~------e~l~~aF~~~D~d~~G~i~~~el~~~l~~~gl~~~ev~~~f~~~D~d~DG~Is~~EF~~~m~~~~  146 (182)
T d1s6ia_          81 E------ENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDDMIKEIDQDNDGQIDYGEFAAMMRKRK  146 (182)
T ss_dssp             C------CSTHHHHHHTTTTCSSEEEHHHHHHTTTTTTCCTTHHHHHHHHHCSSSSSEEETTHHHHTTSCCC
T ss_pred             H------HHHHHHHHHHhhcCCCccchhhhhhhhhhcCccHHHHHHHHHHhhcCCCCeEeHHHHHHHHHhCc
Confidence            2      2367799999999999999999999998776    389999999999999999999999998664

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.83  E-value=2.6e-21  Score=159.72  Aligned_cols=136  Identities=18%  Similarity=0.261  Sum_probs=112.3

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHH-hcCCCCCcccHHHHHHHHhhhhhhcccccHHHHH
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQA-IDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHL  350 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~-~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~  350 (429)
                      .++++|..+|.|++|+|+.+||..+|. .+|..++.++++.++.. .+.+.+|.|+|++|+..+...............+
T Consensus         3 ~~k~~F~~~D~d~~G~I~~~el~~~l~-~lg~~~s~~ei~~l~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~~~~~~~   81 (146)
T d1m45a_           3 ANKDIFTLFDKKGQGAIAKDSLGDYLR-AIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTE   81 (146)
T ss_dssp             CCTTCHHHHCTTCCSEEEGGGHHHHHH-HTTCCCCHHHHHHHHHC--CC--CCEEEHHHHHHHHHHTHHHHHGGGCCCTH
T ss_pred             HHHHHHHHHcCCCcCCCCHHHHHHHHH-HcCCchhHHHHhhhhccccccccccccccchhhhhhhhhcccccccccchHH
Confidence            478999999999999999999999995 58999999999999974 5566788999999999876554332221111134


Q ss_pred             HHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          351 RSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       351 ~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                      .+..+|+.+|++++|+|+.+||+.++...|.      +..++..+|.|+||.|+|+||+..+.+
T Consensus        82 ~l~~~F~~~D~~~~G~I~~~el~~~l~~~g~~l~~~ei~~l~~~~D~d~dG~I~y~eF~~~i~~  145 (146)
T d1m45a_          82 DFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVLR  145 (146)
T ss_dssp             HHHHHHHTTCSSSSSEEEHHHHHHHHHHSTTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHHC
T ss_pred             HHHHHHHhhccccccccchhhhhhhhcccCCcchHHHHHHHHHHhCCCCCCcEEHHHHHHHHHc
Confidence            6889999999999999999999999988873      899999999999999999999987753

>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin regulatory subunit (B-chain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.83  E-value=2.7e-21  Score=163.04  Aligned_cols=146  Identities=29%  Similarity=0.486  Sum_probs=121.5

Q ss_pred             hhcccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhh
Q 014171          261 LASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL  340 (429)
Q Consensus       261 ~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~  340 (429)
                      |...++++++++|+++|+.+|.|++|+|+.+||..++..  +..   +.+++++..+|.+++|.|+|.||+..+......
T Consensus         6 ~~t~ft~eei~~l~~~F~~~D~d~~G~I~~~E~~~~~~~--~~~---~~~~~l~~~~d~~~~g~i~~~EFl~~~~~~~~~   80 (165)
T d1auib_           6 MCSHFDADEIKRLGKRFKKLDLDNSGSLSVEEFMSLPEL--QQN---PLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVK   80 (165)
T ss_dssp             CCCSCCHHHHHHHHHHHHHHCTTCCSEECHHHHTTSHHH--HTC---TTHHHHHHHHCTTCSSSEEHHHHHHHHGGGCTT
T ss_pred             HcCCCCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHhhhc--cCC---HHHHHHHHHHccccchhhhhhhhhhhccccccc
Confidence            567789999999999999999999999999999887633  222   346789999999999999999999887654332


Q ss_pred             cccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCC-C----------CHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          341 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK-G----------SIDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       341 ~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~-~----------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                      ..     ....+..+|+.+|.|++|+|+.+||+++++.. +          .+..++.++|.|+||.|+|+||+++|++.
T Consensus        81 ~~-----~~~~~~~~f~~~d~d~~g~Is~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~D~~~dG~Is~~EF~~i~~~~  155 (165)
T d1auib_          81 GD-----KEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVVGGL  155 (165)
T ss_dssp             CC-----HHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHCTTSSSSEEHHHHHHHHGGG
T ss_pred             hh-----hHHHHHHHHHHhcccccccccHHHHHHHHHHhccccCchHHHHHHHHHHHHHcCCCCCCcEeHHHHHHHHhcC
Confidence            21     13468899999999999999999999987543 1          16789999999999999999999999988


Q ss_pred             cccCCCC
Q 014171          410 SISSRNV  416 (429)
Q Consensus       410 ~~~~~~~  416 (429)
                      ....++.
T Consensus       156 ~~~~k~~  162 (165)
T d1auib_         156 DIHKKMV  162 (165)
T ss_dssp             CGGGGCC
T ss_pred             ChhhCcc
Confidence            8776554

>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.82  E-value=7.5e-21  Score=156.69  Aligned_cols=136  Identities=18%  Similarity=0.282  Sum_probs=113.3

Q ss_pred             cchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccc
Q 014171          265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD  344 (429)
Q Consensus       265 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~  344 (429)
                      ++++++.+++++|..+|.+++|+|+.+||..+| +.+|..++..+   ++..++.+.+|.|+|++|+..+........  
T Consensus         1 f~~~qi~el~e~F~~~D~~~~G~I~~~e~~~~l-~~lg~~~~~~~---~~~~~~~~~~g~i~~~eF~~~~~~~~~~~~--   74 (145)
T d2mysb_           1 FDETEIEDFKEAFTVIDQNADGIIDKDDLRETF-AAMGRLNVKNE---ELDAMIKEASGPINFTVFLTMFGEKLKGAD--   74 (145)
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH-HHhCCCcchHH---HHHHHHHhccCceeechhhhhhhhcccccc--
Confidence            467899999999999999999999999999999 45887765543   334555678999999999987654322211  


Q ss_pred             cHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          345 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       345 ~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                      .   ...++.+|+.||.+++|+|+.+||+++++..|.      ++.++..+|.|++|.|+|.||+++|...
T Consensus        75 ~---~~~l~~aF~~fD~~~~g~I~~~el~~~l~~~g~~ls~~e~~~~~~~~d~d~dg~I~y~eF~~~l~~~  142 (145)
T d2mysb_          75 P---EDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITHG  142 (145)
T ss_pred             h---HHHHHHHHHhhhhcccchhhHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhccC
Confidence            1   246889999999999999999999999988874      8999999999999999999999999654

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

Probab=99.81  E-value=4e-20  Score=158.29  Aligned_cols=126  Identities=25%  Similarity=0.387  Sum_probs=113.4

Q ss_pred             HHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHH
Q 014171          269 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKW  348 (429)
Q Consensus       269 ~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~  348 (429)
                      +.++++++|+.+|.|++|+|+.+||..+| +.+|..++..+++.++..+|.+++|+|+|++|+..+...           
T Consensus        16 ~~~~l~~~F~~~D~d~dG~Is~~El~~~l-~~l~~~~s~~~~~~l~~~~d~d~~~~i~~~ef~~~~~~~-----------   83 (182)
T d1y1xa_          16 DNQELMEWFRAVDTDGSGAISVPELNAAL-SSAGVPFSLATTEKLLHMYDKNHSGEITFDEFKDLHHFI-----------   83 (182)
T ss_dssp             TTSCHHHHHHHHCTTCSSSBCHHHHHHHH-CBTTBCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH-----------
T ss_pred             cHHHHHHHHHHHcCCCcCCCCHHHHHHHH-HHhcccCchhhhhhhhccccccccccccccccccccccc-----------
Confidence            33579999999999999999999999999 558999999999999999999999999999998765322           


Q ss_pred             HHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHH
Q 014171          349 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLR  407 (429)
Q Consensus       349 ~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~  407 (429)
                       ..+..+|+.+|.+++|+|+.+||++++...|.      ++.+++.+|.|+||.|+|+||+.++.
T Consensus        84 -~~~~~~F~~~D~~~~g~I~~~el~~~l~~~g~~ls~~e~~~i~~~~d~~~dg~I~~~eF~~~~~  147 (182)
T d1y1xa_          84 -LSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDYVELSI  147 (182)
T ss_dssp             -HHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             -cccccchhccccccchhhhhHHHHHHHHHhCCchhHHHHHHHHhhcccCCCCCcCHHHHHHHHH
Confidence             24667899999999999999999999998874      89999999999999999999999874

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.79  E-value=1.1e-19  Score=156.68  Aligned_cols=136  Identities=25%  Similarity=0.313  Sum_probs=109.1

Q ss_pred             hHHHhhhhccccccCCC-CCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhccccc
Q 014171          267 DEELADLRDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS  345 (429)
Q Consensus       267 ~~~~~~l~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~  345 (429)
                      .....+++++|+.|+.+ ++|+|+.+||.++| ...+...+...++.+|..+|.|++|.|+|.||+..+........   
T Consensus        17 ~~~~~ei~~~~~~F~~~~~~G~i~~~Ef~~~l-~~~~~~~~~~~~~~lf~~~D~d~dG~I~f~Ef~~~l~~~~~~~~---   92 (189)
T d1jbaa_          17 AADAAQLQEWYKKFLEECPSGTLFMHEFKRFF-KVPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTL---   92 (189)
T ss_dssp             HHHHHHHHHHHHHHHSSSTTCCEEHHHHHHHH-HCCSSSTTHHHHHHHHHHHCCSSSSEECHHHHHHHHHHHSSCCC---
T ss_pred             ccCHHHHHHHHHHhcccCCCCeeeHHHHHHHH-HHcCCCccHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccch---
Confidence            33334445555554433 58999999999999 45888888999999999999999999999999988876554332   


Q ss_pred             HHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC-----------------------CHHHHHHHhCCCCCCcccHHHH
Q 014171          346 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----------------------SIDPLLEEADIDKDGRISLSEF  402 (429)
Q Consensus       346 ~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~-----------------------~~~~~~~~~d~~~dg~i~~~ef  402 (429)
                         ...++.+|+.||.|++|.|+.+|+..++....                       .++.+|..+|.|+||.|+|+||
T Consensus        93 ---~~~~~~~F~~~D~d~~g~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~if~~~D~d~dG~Is~~EF  169 (189)
T d1jbaa_          93 ---EHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDENGDGQLSLNEF  169 (189)
T ss_dssp             ---THHHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSSTTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHH
T ss_pred             ---HHHHHHHHhhhccCCCCcccHhHHHHHHHHHHHhhccccccchhhhhccccchHHHHHHHHHHhCCCCCCcEeHHHH
Confidence               23577899999999999999999988654321                       1678999999999999999999


Q ss_pred             HHHHHhc
Q 014171          403 RRLLRTA  409 (429)
Q Consensus       403 ~~~~~~~  409 (429)
                      +.++++.
T Consensus       170 ~~~~~~~  176 (189)
T d1jbaa_         170 VEGARRD  176 (189)
T ss_dssp             HHHHTTT
T ss_pred             HHHHHhC
Confidence            9999754

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

Probab=99.79  E-value=3.4e-19  Score=153.47  Aligned_cols=161  Identities=17%  Similarity=0.278  Sum_probs=126.8

Q ss_pred             chHHHhhhhccccccCCCCCCcccHHHHHHHHH----hhCCCCccHHHHHHHH-----HHhcCCCCCcccHHHHHHHHhh
Q 014171          266 DDEELADLRDQFDAIDVDKNGSISLEEMRQALA----KDLPWKLKESRVLEIL-----QAIDCNTDGLVDFSEFVAATLH  336 (429)
Q Consensus       266 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~----~~~~~~~~~~~~~~l~-----~~~d~~~~g~I~~~eF~~~~~~  336 (429)
                      +++++++++++|..+|.|++|+|+.+||..++.    +.+|..++..++..++     ...+...++.|++++|+..+..
T Consensus         9 ~~~~i~r~k~~F~~~D~d~dG~I~~~E~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~e~~~~~~~   88 (189)
T d1qv0a_           9 NPRWIKRHKHMFDFLDINGNGKITLDEIVSKASDDICAKLEATPEQTKRHQVCVEAFFRGCGMEYGKEIAFPQFLDGWKQ   88 (189)
T ss_dssp             CHHHHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHTHHHHTTCCHHHHHHHHHHHHHHHHHTTCCTTCCBCHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHcCCCchhHHHHHHHHHHHhhhccccCCCceehHHHHHHHHH
Confidence            567888999999999999999999999987643    3577777776665433     3455677889999999988766


Q ss_pred             hhhh-----cccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHH
Q 014171          337 VHQL-----EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRL  405 (429)
Q Consensus       337 ~~~~-----~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~  405 (429)
                      ....     ...........+..+|+.+|+|++|+|+.+||+.++...|.      ++.+|..+|.|+||.|+|+||+++
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~is~~E~~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~  168 (189)
T d1qv0a_          89 LATSELKKWARNEPTLIREWGDAVFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQ  168 (189)
T ss_dssp             HHHHHHHHHHTTCCCHHHHHHHHHHHHTC----CEECHHHHHHHHHHHSSCCCHHHHHHHHHHSCCCTTSCEEHHHHHHH
T ss_pred             HHHHhhhccccccHHHHHHHHHHHHHHHccCCCCcccchhhHHHHHhcCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHH
Confidence            4221     11122223455778999999999999999999999988773      899999999999999999999999


Q ss_pred             HHhccccCCCCCCCCCCCCCC
Q 014171          406 LRTASISSRNVPPSPSGHRNP  426 (429)
Q Consensus       406 ~~~~~~~~~~~~~~~~~~~~~  426 (429)
                      +.+.+.+.++++|+..+-+.|
T Consensus       169 ~~~~~~~~d~~~~g~~~~~~~  189 (189)
T d1qv0a_         169 HLGFWYTLDPEADGLYGNGVP  189 (189)
T ss_dssp             HHHHHTTCCGGGTTTTTTSCC
T ss_pred             HHHhCCCCCCCCCCcCCCCCC
Confidence            999999999999998887776

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.78  E-value=1.7e-19  Score=154.33  Aligned_cols=139  Identities=22%  Similarity=0.395  Sum_probs=114.7

Q ss_pred             cccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcc
Q 014171          263 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE  342 (429)
Q Consensus       263 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~  342 (429)
                      ..++..+++.+++.|..  .+++|+|+..||..++....+.......++++|..+|.+++|.|+|+||+..+........
T Consensus        16 t~fs~~ei~~l~~~F~~--~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~lf~~~d~~~~g~i~~~eFl~~~~~~~~~~~   93 (181)
T d1bjfa_          16 TDFTEHEIQEWYKGFLR--DCPSGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKL   93 (181)
T ss_dssp             SSCCHHHHHHHHHHHHH--HSTTSEEEHHHHHHHHTTTSSSSCCHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHTSSCH
T ss_pred             cCCCHHHHHHHHHHHHh--hCCCCCcCHHHHHHHHHHhCCCCCHHHHHHHHHHhcCCCCCCcEeHHHHHHHHHHHhhhch
Confidence            35788999999888864  4678999999999999664444445567899999999999999999999988776544322


Q ss_pred             cccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC------------------CHHHHHHHhCCCCCCcccHHHHHH
Q 014171          343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------------------SIDPLLEEADIDKDGRISLSEFRR  404 (429)
Q Consensus       343 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~------------------~~~~~~~~~d~~~dg~i~~~ef~~  404 (429)
                            .++++.+|+.+|.|++|+|+.+|+..++....                  .++.+|+++|.|+||.|||+||++
T Consensus        94 ------~~~~~~~f~~~D~d~dg~i~~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~  167 (181)
T d1bjfa_          94 ------EQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIR  167 (181)
T ss_dssp             ------HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGSSHHHHHHHHHHHSCTTCSSEECHHHHHH
T ss_pred             ------HHHHHHHHHHhccCCCCeecHHHHHHHHHHHhhhccccccCCcccccHHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence                  35688899999999999999999998876321                  178899999999999999999999


Q ss_pred             HHHhc
Q 014171          405 LLRTA  409 (429)
Q Consensus       405 ~~~~~  409 (429)
                      ++.+.
T Consensus       168 ~~~~~  172 (181)
T d1bjfa_         168 GAKSD  172 (181)
T ss_dssp             HHHHC
T ss_pred             HHHhC
Confidence            98754

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Apoptosis-linked protein alg-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.78  E-value=1.9e-19  Score=153.80  Aligned_cols=128  Identities=27%  Similarity=0.345  Sum_probs=111.0

Q ss_pred             HHHhhhhccccccCCCCCCcccHHHHHHHHHhhCC-CCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccH
Q 014171          268 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP-WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSE  346 (429)
Q Consensus       268 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~-~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~  346 (429)
                      .+.+.|.++|..+|.|++|+|+.+||..+|.. ++ ...+..+++.+++.+|.+++|.|+|+||+.++...         
T Consensus        16 ~~~~~L~~iF~~~D~d~~G~Is~~E~~~~l~~-~~~~~~~~~~~~~l~~~~D~d~~g~i~~~EFl~~~~~~---------   85 (181)
T d1hqva_          16 PDQSFLWNVFQRVDKDRSGVISDNELQQALSN-GTWTPFNPVTVRSIISMFDRENKAGVNFSEFTGVWKYI---------   85 (181)
T ss_dssp             SCHHHHHHHHHHHCTTCCSSBCHHHHHHHCCC-SSSSCCCHHHHHHHHHHHCCSSSSSBCHHHHHHHHHHH---------
T ss_pred             ccHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH-cCCCcccHHHHHHHhhccccccccchhhhHHHhhhhhc---------
Confidence            34467999999999999999999999999955 55 44688999999999999999999999999876432         


Q ss_pred             HHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          347 KWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       347 ~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                         ..++.+|+.+|++++|+|+.+||++++...+.      ++.++..+|.+++|.|+|+||+.++..
T Consensus        86 ---~~~~~~f~~~D~~~~G~i~~~el~~~l~~~~~~l~~e~~~~~~~~~d~~~dg~Is~~eF~~~~~~  150 (181)
T d1hqva_          86 ---TDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQGCIV  150 (181)
T ss_dssp             ---HHHHHHHHHHCTTCCSSBCHHHHHHHHHHHTBCCCHHHHHHHHHHHCSSCSSCBCHHHHHHHHHH
T ss_pred             ---cccccccccccccccchhhhHHHHHHHHHcCCcchhHHHHHHHHHhCCCCCCcCcHHHHHHHHHH
Confidence               23567999999999999999999999877663      788999999999999999999988743

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Recoverin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.77  E-value=3.4e-19  Score=155.08  Aligned_cols=139  Identities=20%  Similarity=0.268  Sum_probs=114.3

Q ss_pred             cccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcc
Q 014171          263 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE  342 (429)
Q Consensus       263 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~  342 (429)
                      ..++..++..+.+.|.  +.+++|.|+.+||..++....+...+...++.+|..+|.+++|.|+|.||+.++........
T Consensus        20 t~f~~~ei~~l~~~F~--~~~~~G~is~~EF~~~l~~~~~~~~~~~~~~~if~~~D~~~~G~I~f~EF~~~~~~~~~~~~   97 (201)
T d1omra_          20 TKFTEEELSSWYQSFL--KECPSGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKT   97 (201)
T ss_dssp             CSSCHHHHHHHHHHHH--HHCTTSEEEHHHHHHHHHHHCTTSCCHHHHHHHHHTTTSCSSSEEEHHHHHHHHHHHHSSCG
T ss_pred             CCCCHHHHHHHHHHHH--HHCcCCCccHHHHHHHHHHhcCCCCHHHHHHHHHHHhccCCCCeEeehhHHHHHHhhcccch
Confidence            4578899999988885  44578999999999999775555666777899999999999999999999988776654433


Q ss_pred             cccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC--------------------CHHHHHHHhCCCCCCcccHHHH
Q 014171          343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG--------------------SIDPLLEEADIDKDGRISLSEF  402 (429)
Q Consensus       343 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~--------------------~~~~~~~~~d~~~dg~i~~~ef  402 (429)
                      .      ..++.+|+.||.|++|+|+.+|+..++....                    .++.+|..+|.|+||.|+|+||
T Consensus        98 ~------~~l~~~F~~~D~d~~G~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF  171 (201)
T d1omra_          98 N------QKLEWAFSLYDVDGNGTISKNEVLEIVTAIFKMISPEDTKHLPEDENTPEKRAEKIWGFFGKKDDDKLTEKEF  171 (201)
T ss_dssp             G------GSHHHHHHHHCTTCSSSBCHHHHHHHHHHHHTTSCHHHHTTSCGGGSSHHHHHHHHHHHTTCCTTCCBCHHHH
T ss_pred             H------HHHHHHHHHHccCCCCccCHHHHHHHHHHHHhhcChhhhhhhhhhhccHHHHHHHHHHHhCCCCCCCCcHHHH
Confidence            2      3477899999999999999999987765321                    1577999999999999999999


Q ss_pred             HHHHHhc
Q 014171          403 RRLLRTA  409 (429)
Q Consensus       403 ~~~~~~~  409 (429)
                      ++.+.+.
T Consensus       172 ~~~~~~~  178 (201)
T d1omra_         172 IEGTLAN  178 (201)
T ss_dssp             HHHHHHC
T ss_pred             HHHHHHC
Confidence            9977653

>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=2.5e-20  Score=152.35  Aligned_cols=130  Identities=20%  Similarity=0.303  Sum_probs=106.9

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcC--CCCCcccHHHHHHHHhhhhhhcccccHHHH
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDC--NTDGLVDFSEFVAATLHVHQLEEHDSEKWH  349 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~--~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~  349 (429)
                      +++++|..+|.+++|.|+.+||..+|. .+|..++..++..++...+.  +++|.|+|.+|...+..........   ..
T Consensus         1 e~ke~F~~~D~d~~G~I~~~el~~~l~-~lg~~~t~~e~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~~---~~   76 (139)
T d1w7jb1           1 EFKEAFELFDRVGDGKILYSQCGDVMR-ALGQNPTNAEVLKVLGNPKSDELKSRRVDFETFLPMLQAVAKNRGQG---TY   76 (139)
T ss_dssp             CHHHHHHHHCCSSSSEEESTTHHHHHH-HTTCCCCHHHHHHHTTCCCHHHHTTCEEEHHHHHHHHHHHCC----------
T ss_pred             CHHHHHHHHhCCCCCeECHHHHHHHHH-HhccCCCHHHHHHHHHHHhcccccCCceeeeccchhhHhhhhhcccc---HH
Confidence            367889999999999999999999995 59999999999999987764  5789999999998765443322211   12


Q ss_pred             HHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHH
Q 014171          350 LRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLL  406 (429)
Q Consensus       350 ~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~  406 (429)
                      ..+..+|+.+|++++|+|+.+||++++...|.      ++.++. .|.|+||.|+|+||+++|
T Consensus        77 ~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~l~~-~~~d~dg~I~~~eF~~~l  138 (139)
T d1w7jb1          77 EDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLA-GHEDSNGCINYEAFLKHI  138 (139)
T ss_dssp             -CCHHHHHTTCTTSSSEEEHHHHHHHHHHSSSCCCHHHHHHHHT-TCCCTTSEEEHHHHHHHT
T ss_pred             HHHHHhhhhccCCCCCeEeHHHHHHHHHHhCCCCCHHHHHHHHh-hCCCCCCeEeHHHHHHHh
Confidence            34788999999999999999999999998874      777776 488999999999999876

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=2.9e-19  Score=153.62  Aligned_cols=138  Identities=21%  Similarity=0.324  Sum_probs=114.4

Q ss_pred             ccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhccc
Q 014171          264 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH  343 (429)
Q Consensus       264 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~  343 (429)
                      .++..++..|.+.|...  +++|.++..+|..++....+...+...++.+|..+|.+++|.|+|.||+.++........ 
T Consensus        18 ~fs~~Ei~~l~~~F~~~--~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~d~~~dg~I~~~EF~~~l~~~~~~~~-   94 (187)
T d1g8ia_          18 YFTEKEVQQWYKGFIKD--CPSGQLDAAGFQKIYKQFFPFGDPTKFATFVFNVFDENKDGRIEFSEFIQALSVTSRGTL-   94 (187)
T ss_dssp             SSCHHHHHHHHHHHHHH--CTTSEEEHHHHHHHHHHHCTTSCTHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHCCH-
T ss_pred             CCCHHHHHHHHHHHHHH--CCCCCcCHHHHHHHHHHhcCCCCHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHhccCch-
Confidence            46888988898888654  478999999999999776555555666788999999999999999999998876654322 


Q ss_pred             ccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC------------------CHHHHHHHhCCCCCCcccHHHHHHH
Q 014171          344 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------------------SIDPLLEEADIDKDGRISLSEFRRL  405 (429)
Q Consensus       344 ~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~------------------~~~~~~~~~d~~~dg~i~~~ef~~~  405 (429)
                           .++++.+|+.||.|++|+|+++|+..++....                  .++.+|+++|.|+||.|+|+||+++
T Consensus        95 -----~e~l~~~F~~~D~d~dG~i~~~El~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG~Is~~EF~~~  169 (187)
T d1g8ia_          95 -----DEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQEG  169 (187)
T ss_dssp             -----HHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSSHHHHHHHHHHHHCSSCSSEEEHHHHHHH
T ss_pred             -----hhhHHHHHHHHhcCCCCeEcHHHHHHHHHHHhhhhcccccCchhhccHHHHHHHHHHHhCCCCCCcEeHHHHHHH
Confidence                 34688899999999999999999998875321                  1678999999999999999999998


Q ss_pred             HHhc
Q 014171          406 LRTA  409 (429)
Q Consensus       406 ~~~~  409 (429)
                      +.+.
T Consensus       170 ~~~~  173 (187)
T d1g8ia_         170 SKAD  173 (187)
T ss_dssp             HHHC
T ss_pred             HHHC
Confidence            8763

>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin B-like protein 2
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.77  E-value=3.4e-19  Score=152.62  Aligned_cols=141  Identities=27%  Similarity=0.401  Sum_probs=115.8

Q ss_pred             hcccchHHHhhhhccccccCCC--CCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhh
Q 014171          262 ASTLDDEELADLRDQFDAIDVD--KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ  339 (429)
Q Consensus       262 ~~~~~~~~~~~l~~~F~~~D~~--~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~  339 (429)
                      ...++..++..|++.|..+|.+  ++|+|+.+||..++.. .+...+ ..++.+|+.+|.+++|.|+|.||+.++.....
T Consensus         8 ~t~Fs~~ei~~L~~~F~~~d~~~~~~G~i~~~ef~~~l~~-~~~~~~-~~~~~lf~~~d~~~dg~I~f~EFl~~l~~~~~   85 (183)
T d2zfda1           8 DTVFSVSEIEALYELFKKISSAVIDDGLINKEEFQLALFK-TNKKES-LFADRVFDLFDTKHNGILGFEEFARALSVFHP   85 (183)
T ss_dssp             HSSCCHHHHHHHHHHHHHHHTSSSCSSSBCHHHHHHHHHS-CSSCCC-HHHHHHHHHHCSSCSSSBCHHHHHHHHHHTST
T ss_pred             hCCCCHHHHHHHHHHHHHHCcCCCCCCcCcHHHHHHHHHh-cCCCCC-HHHHHHHHHHccCCCCcCcHHHHHHHHHhhhc
Confidence            3578999999999999999865  6999999999999843 555543 46799999999999999999999988765433


Q ss_pred             hcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCC----C----------CHHHHHHHhCCCCCCcccHHHHHHH
Q 014171          340 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK----G----------SIDPLLEEADIDKDGRISLSEFRRL  405 (429)
Q Consensus       340 ~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~----~----------~~~~~~~~~d~~~dg~i~~~ef~~~  405 (429)
                      ...   .  ..+++.+|+.||.|++|+|+++|++.++...    +          .++.+|.++|.|+||.|+|+||+.+
T Consensus        86 ~~~---~--~~~~~~~F~~~D~d~~G~Is~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~dG~Is~~EF~~~  160 (183)
T d2zfda1          86 NAP---I--DDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIEDIIDKTFEEADTKHDGKIDKEEWRSL  160 (183)
T ss_dssp             TSC---H--HHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHCSSCSSEECHHHHHHH
T ss_pred             cCc---H--HHHHHHhhcccccCCCCCccHHHHHHHHHHHHhhhhcccchHHHHHHHHHHHHHhCCCCCCeEcHHHHHHH
Confidence            211   1  3468889999999999999999999876432    1          1677899999999999999999999


Q ss_pred             HHhc
Q 014171          406 LRTA  409 (429)
Q Consensus       406 ~~~~  409 (429)
                      +...
T Consensus       161 ~~~~  164 (183)
T d2zfda1         161 VLRH  164 (183)
T ss_dssp             HHHS
T ss_pred             HHHC
Confidence            8753

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.76  E-value=2.6e-19  Score=154.24  Aligned_cols=137  Identities=21%  Similarity=0.351  Sum_probs=113.7

Q ss_pred             ccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhccc
Q 014171          264 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH  343 (429)
Q Consensus       264 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~  343 (429)
                      .++..+++.|.+.|..  .+++|.++..||..++....+.......++++|..+|.+++|.|+|.||+.++........ 
T Consensus        21 ~fs~~Ei~~l~~~F~~--~~~~G~i~~~ef~~~~~~~~~~~~~~~~~~~if~~~D~~~~G~I~~~Ef~~~~~~~~~~~~-   97 (190)
T d1fpwa_          21 YFDRREIQQWHKGFLR--DCPSGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTL-   97 (190)
T ss_dssp             CSTHHHHHHHHHHHHH--HCTTCCEEHHHHHHHHHHHCTTSCCSHHHHHHHHTCCSSCSSEECHHHHHHHHHHHSCCCS-
T ss_pred             CCCHHHHHHHHHHHHH--HCCCCCccHHHHHHHHHHHCCCCChHHHHHHHHHHhCcCCCCcccHHHHHHHHHHHccCch-
Confidence            4788899999888864  4568999999999999775555555566899999999999999999999988776654332 


Q ss_pred             ccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC------------------CHHHHHHHhCCCCCCcccHHHHHHH
Q 014171          344 DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------------------SIDPLLEEADIDKDGRISLSEFRRL  405 (429)
Q Consensus       344 ~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~------------------~~~~~~~~~d~~~dg~i~~~ef~~~  405 (429)
                           .++++.+|+.||.|++|+|+.+|+..++....                  .++.+|+++|.|+||.|+|+||+++
T Consensus        98 -----~e~~~~~F~~~D~d~dG~is~~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~if~~~D~d~dG~Is~~EF~~~  172 (190)
T d1fpwa_          98 -----EEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEFREG  172 (190)
T ss_dssp             -----THHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCCCHHHHHHHHHHHHTTTCSSEEEHHHHHHH
T ss_pred             -----HHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHHhcccccCCCchhhhHHHHHHHHHHHhCCCCCCcCcHHHHHHH
Confidence                 24688899999999999999999998774321                  1788999999999999999999998


Q ss_pred             HHh
Q 014171          406 LRT  408 (429)
Q Consensus       406 ~~~  408 (429)
                      +.+
T Consensus       173 ~~~  175 (190)
T d1fpwa_         173 SKV  175 (190)
T ss_dssp             HHS
T ss_pred             HHH
Confidence            876

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=99.75  E-value=1.8e-18  Score=148.19  Aligned_cols=152  Identities=16%  Similarity=0.206  Sum_probs=118.6

Q ss_pred             cchHHHhhhhccccc-cCCCCCCcccHHHHHHHHHhhC---CCCccH-----------HHHHHHHHHhcCCCCCcccHHH
Q 014171          265 LDDEELADLRDQFDA-IDVDKNGSISLEEMRQALAKDL---PWKLKE-----------SRVLEILQAIDCNTDGLVDFSE  329 (429)
Q Consensus       265 ~~~~~~~~l~~~F~~-~D~~~~G~i~~~el~~~l~~~~---~~~~~~-----------~~~~~l~~~~d~~~~g~I~~~e  329 (429)
                      +++.+..+++.+|.. +|.|++|.|+.+||..++.+..   ......           .....++...|.+++|.|++++
T Consensus         2 lt~~q~~~i~~~F~~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~i~~~~   81 (185)
T d2sasa_           2 LNDFQKQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEE   81 (185)
T ss_dssp             CCHHHHHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHH
T ss_pred             cCHHHHHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHhccccCCCcccHHHHHHHHHHHHHHHHHHHHhCcCCCCcEeeeH
Confidence            577788899999997 5999999999999999985421   011111           1123456778999999999999


Q ss_pred             HHHHHhhhhhhcc---cccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC----CHHHHHHHhCCCCCCcccHHHH
Q 014171          330 FVAATLHVHQLEE---HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEF  402 (429)
Q Consensus       330 F~~~~~~~~~~~~---~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~----~~~~~~~~~d~~~dg~i~~~ef  402 (429)
                      |...+........   .........+..+|+.+|.|++|+|+.+||+.++...+    ++..+|..+|.|+||.|+|+||
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~l~~~~~~~~f~~~D~d~dG~i~~~EF  161 (185)
T d2sasa_          82 YLAMWEKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQLQCADVPAVYNVITDGGKVTFDLNRY  161 (185)
T ss_dssp             HHHHHHHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSCCCCSSHHHHHHHHHTTTTSCCSHHHH
T ss_pred             hhHHHHHHhhhhhhhhhhhHHHHHHHHHHHHHHccCCCccCCHHHHHHHHHHcCCCHHHHHHHHHHcCCCCCCCCcHHHH
Confidence            9988765432211   11122234578899999999999999999999998876    4999999999999999999999


Q ss_pred             HHHHHhccccCCCC
Q 014171          403 RRLLRTASISSRNV  416 (429)
Q Consensus       403 ~~~~~~~~~~~~~~  416 (429)
                      ..++.....+.+++
T Consensus       162 ~~~~~~f~~~~~~d  175 (185)
T d2sasa_         162 KELYYRLLTSPAAD  175 (185)
T ss_dssp             HHHHHHHHHCSSCS
T ss_pred             HHHHHHHhcCCCCC
Confidence            99999988777654

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

Probab=99.74  E-value=2.1e-18  Score=148.13  Aligned_cols=161  Identities=19%  Similarity=0.242  Sum_probs=125.6

Q ss_pred             chHHHhhhhccccccCCCCCCcccHHHHHHHHHh----hCCCCccHHHHHHHHHH-----hcCCCCCcccHHHHHHHHhh
Q 014171          266 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAK----DLPWKLKESRVLEILQA-----IDCNTDGLVDFSEFVAATLH  336 (429)
Q Consensus       266 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~----~~~~~~~~~~~~~l~~~-----~d~~~~g~I~~~eF~~~~~~  336 (429)
                      ++.++++++++|..+|.|++|+|+.+||..++..    .+|..++..++...+..     .....++.+++.+|+..+..
T Consensus         7 ~p~~~~~~k~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   86 (187)
T d1uhka1           7 NPRWIGRHKHMFNFLDVNHNGKISLDEMVYKASDIVINNLGATPEQAKRHKDAVEAFFGGAGMKYGVETDWPAYIEGWKK   86 (187)
T ss_dssp             CHHHHHHHHHHHHHHCTTCCSEEEHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHTTCCTTCEEEHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHHhccCccHHHHHHHHHHhhhhcccccccccccHHHHHHHHHH
Confidence            4566889999999999999999999999876543    46777777766554443     33455677999999887665


Q ss_pred             hhhhcc-----cccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHH
Q 014171          337 VHQLEE-----HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRL  405 (429)
Q Consensus       337 ~~~~~~-----~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~  405 (429)
                      ......     .........+..+|+.+|+|++|+|+.+||++++...|.      ++.+++.+|.|+||.|+|+||+++
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~  166 (187)
T d1uhka1          87 LATDELEKYAKNEPTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKAAGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQ  166 (187)
T ss_dssp             HHHHHHHHHHTTCCCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHHH
T ss_pred             HHHHHHHhhhhhhHHHHHHHHHHHHHHHccCCCcccchHHHHHHHHHhCCCccHHHHHHHHHHhCCCCCCCEeHHHHHHH
Confidence            433211     111222455788999999999999999999999987763      899999999999999999999999


Q ss_pred             HHhccccCCCCCCCCCCCCCC
Q 014171          406 LRTASISSRNVPPSPSGHRNP  426 (429)
Q Consensus       406 ~~~~~~~~~~~~~~~~~~~~~  426 (429)
                      +.+.+.+.++++++--|--.|
T Consensus       167 ~~~~~~~~d~~~~~~~~~~~~  187 (187)
T d1uhka1         167 HLGFWYTMDPACEKLYGGAVP  187 (187)
T ss_dssp             HHHHHTTCCGGGTTTTTTSCC
T ss_pred             HHHhcccCCcccccccCCCCc
Confidence            999999998888775554433

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.73  E-value=2.6e-18  Score=146.38  Aligned_cols=138  Identities=25%  Similarity=0.360  Sum_probs=112.2

Q ss_pred             cccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcc
Q 014171          263 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE  342 (429)
Q Consensus       263 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~  342 (429)
                      ..++..+++.+.+.|..  .+++|.|+.+||..++....+...+...++++|..+|.+++|.|+|+||+.++........
T Consensus         8 t~ft~~ei~~l~~~F~~--~~~~G~is~~ef~~~l~~~~~~~~~~~~~~~lf~~~D~~~~g~I~~~EFl~~~~~~~~~~~   85 (178)
T d1s6ca_           8 TNFTKRELQVLYRGFKN--ECPSGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTV   85 (178)
T ss_dssp             SSCCHHHHHHHHHHHHH--HCTTSEECHHHHHHHHHHHSTTSCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHCCH
T ss_pred             CCCCHHHHHHHHHHHHH--HCcCCCccHHHHHHHHHHhCCCCCHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHHhccch
Confidence            45688888888887764  4567999999999999775555555666799999999999999999999988765544332


Q ss_pred             cccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC------------------CHHHHHHHhCCCCCCcccHHHHHH
Q 014171          343 HDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------------------SIDPLLEEADIDKDGRISLSEFRR  404 (429)
Q Consensus       343 ~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~------------------~~~~~~~~~d~~~dg~i~~~ef~~  404 (429)
                            ..+++.+|+.||.|++|+|+.+|+..++....                  .++.+|+.+|.|+||.|||+||..
T Consensus        86 ------~~~~~~~f~~~D~~~~g~i~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~if~~~D~d~DG~Is~~EF~~  159 (178)
T d1s6ca_          86 ------HEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGIVTLDEFLE  159 (178)
T ss_dssp             ------HHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC-----------CHHHHHHHHHHHCTTCSSEECHHHHHH
T ss_pred             ------HHHHHHHHHhhccCCCCeecHHHHHHHHHHHHhhcccccccCCcHHHHHHHHHHHHHHhCCCCCCcEeHHHHHH
Confidence                  34688899999999999999999987654221                  167899999999999999999999


Q ss_pred             HHHh
Q 014171          405 LLRT  408 (429)
Q Consensus       405 ~~~~  408 (429)
                      ++.+
T Consensus       160 ~i~~  163 (178)
T d1s6ca_         160 SCQE  163 (178)
T ss_dssp             HTTS
T ss_pred             HHHH
Confidence            7764

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

Probab=99.73  E-value=8.7e-19  Score=149.95  Aligned_cols=129  Identities=21%  Similarity=0.357  Sum_probs=93.0

Q ss_pred             chHHH-hhhhccccccCCCCCCcccHHHHHHHHHhhCCCC--------ccHHHHHHHHHHhcCCCCCcccHHHHHHHHhh
Q 014171          266 DDEEL-ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWK--------LKESRVLEILQAIDCNTDGLVDFSEFVAATLH  336 (429)
Q Consensus       266 ~~~~~-~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~--------~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~  336 (429)
                      +++++ +.++++|+.+| +++|.|+..||+.+|.. .+..        ++.+.++.++..+|.|++|+|+|+||..++..
T Consensus        14 s~~~~~~~~r~~F~~~d-~~dG~Is~~EL~~~L~~-~~~~~~~~~~~~~s~e~~~~li~~~D~d~~G~i~~~EF~~l~~~   91 (188)
T d1qxpa2          14 SEEEIDDNFKTLFSKLA-GDDMEISVKELQTILNR-IISKHKDLRTNGFSLESCRSMVNLMDRDGNGKLGLVEFNILWNR   91 (188)
T ss_dssp             -------------CCCC-CSSSSCCCSCTTTTTCC----------CCCCCHHHHHHHHHHHCC--CCCCCSSSHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHc-CCCCEECHHHHHHHHHH-hCccccccccccCCHHHHHHHHHHhcCCCCCcccHHHHHHHHhh
Confidence            45554 35899999999 55899999999998743 3332        45678999999999999999999999986643


Q ss_pred             hhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC-----HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          337 VHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS-----IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       337 ~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~-----~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                      .            ..++.+|+.||+|++|+|+..||+.++...|.     +..++...|.|++|.|+|+||+.+|..
T Consensus        92 ~------------~~~~~~F~~~D~d~sG~i~~~El~~~l~~~g~~~~~~~~~~l~~~~~~~dg~i~f~eFi~~~~~  156 (188)
T d1qxpa2          92 I------------RNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFADDELIIDFDNFVRCLVR  156 (188)
T ss_dssp             H------------HHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECCHHHHHHHHHHTSCSSSBCCHHHHHHHHHH
T ss_pred             h------------HHHHHHHHHhCCCCCCEECHHHHHHHHHHhhhcCCHHHHHHHHHHhcCCCCcCCHHHHHHHHHH
Confidence            2            23567999999999999999999999998873     444555557899999999999988643

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

Probab=99.73  E-value=5.1e-18  Score=143.88  Aligned_cols=150  Identities=17%  Similarity=0.215  Sum_probs=112.9

Q ss_pred             hHHHhhhhccccccCCCCCCcccHHHHHHHHHhh---CCCCccHH-H----HHHHHHH--hcCCCCCcccHHHHHHHHhh
Q 014171          267 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKD---LPWKLKES-R----VLEILQA--IDCNTDGLVDFSEFVAATLH  336 (429)
Q Consensus       267 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~---~~~~~~~~-~----~~~l~~~--~d~~~~g~I~~~eF~~~~~~  336 (429)
                      +.+.++++.+|+.+|.|++|+|+.+||..++.+.   .+...... .    ....+..  .+.+++|.|+++||+..+..
T Consensus         2 ~~~~~~l~~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~   81 (174)
T d2scpa_           2 DLWVQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKE   81 (174)
T ss_dssp             HHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCCCTTHHHHHHHHHHHHHHHTGGGTTTTSCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHccCCCCcEeHHHHHHHHHHHhccccchhHHHHHhHHhhhhhccccccccCCCCcCcHHHHHHHHHh
Confidence            4567889999999999999999999999887542   22222111 1    1223332  36778999999999988765


Q ss_pred             hhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC----CHHHHHHHhCCCCCCcccHHHHHHHHHhcccc
Q 014171          337 VHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTASIS  412 (429)
Q Consensus       337 ~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~----~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~~  412 (429)
                      ....... .......+..+|+.+|+|++|+|+.+||+.+++..+    ++..+|..+|.|+||.|+|+||+.+++....+
T Consensus        82 ~~~~~~~-~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~~~~~~~~~~f~~~D~d~dG~Is~~Ef~~~~~~f~~~  160 (174)
T d2scpa_          82 MVKNPEA-KSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLGLDKTMAPASFDAIDTNNDGLLSLEEFVIAGSDFFMN  160 (174)
T ss_dssp             HTSCGGG-THHHHTHHHHHHHHHCTTCSSSEEHHHHHHHHHHTTCCGGGHHHHHHHHCTTCSSEECHHHHHHHHHHHHHC
T ss_pred             hhcchhh-HHHHHHHHHHHHHHHCCCccccCCHHHHHHHHHHHhhhhHHHHHHHhhcCCCCCCcEeHHHHHHHHHHHhhc
Confidence            5433222 222244578899999999999999999999987665    48999999999999999999999999887654


Q ss_pred             CCCCCC
Q 014171          413 SRNVPP  418 (429)
Q Consensus       413 ~~~~~~  418 (429)
                       ++++|
T Consensus       161 -~~~~~  165 (174)
T d2scpa_         161 -DGDST  165 (174)
T ss_dssp             -SSCCG
T ss_pred             -CCccc
Confidence             44444

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=4.6e-18  Score=142.17  Aligned_cols=120  Identities=19%  Similarity=0.316  Sum_probs=100.7

Q ss_pred             hhccccccCCCCCCcccHHHHHHHHHhhCCCCc-----cHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHH
Q 014171          273 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKL-----KESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEK  347 (429)
Q Consensus       273 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~-----~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~  347 (429)
                      +.+.|+++ .+.+|.|+.+||+.+|.. .|.+.     +.+.++.++..+|.|++|.|+|+||+.++...          
T Consensus         2 ~~~~F~~~-a~~dG~I~~~EL~~~L~~-~g~~~~~~~~s~~~~~~li~~~D~~~~G~i~~~EF~~l~~~~----------   69 (165)
T d1k94a_           2 VYTYFSAV-AGQDGEVDAEELQRCLTQ-SGINGTYSPFSLETCRIMIAMLDRDHTGKMGFNAFKELWAAL----------   69 (165)
T ss_dssp             HHHHHHHH-HGGGTSBCHHHHHHHHHH-HTTTTTSCCCCHHHHHHHHHHHCTTCSSCBCHHHHHHHHHHH----------
T ss_pred             hHHHHHHh-cCCCCCCCHHHHHHHHHH-cCCCCCcccCCHHHHHHHHHHhCCCCCCcCcHHHHHHHhhcc----------
Confidence            34567776 578999999999999955 56543     56789999999999999999999999866432          


Q ss_pred             HHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          348 WHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       348 ~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                        ..++.+|+.||+|++|+|+.+||+.++...|.      ++.++..+|.  ||.|+|+||+.+|..
T Consensus        70 --~~~~~~F~~fD~d~sG~I~~~El~~~l~~~G~~l~~~~~~~l~~~~d~--~g~i~~~eFi~~~~~  132 (165)
T d1k94a_          70 --NAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLSPQTLTTIVKRYSK--NGRIFFDDYVACCVK  132 (165)
T ss_dssp             --HHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCCHHHHHHHHHHHCB--TTBCBHHHHHHHHHH
T ss_pred             --chhHHHHHHhCCCCCCeEcHHHHHHHHHHhhhcCCHHHHHHHHHHcCC--CCcCcHHHHHHHHHH
Confidence              24667999999999999999999999998884      8889999975  589999999987654

>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), M-type [TaxId: 10116]

Probab=99.71  E-value=3.7e-18  Score=146.41  Aligned_cols=129  Identities=19%  Similarity=0.303  Sum_probs=107.5

Q ss_pred             chHHH-hhhhccccccCCCCCCcccHHHHHHHHHhhCC--------CCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhh
Q 014171          266 DDEEL-ADLRDQFDAIDVDKNGSISLEEMRQALAKDLP--------WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH  336 (429)
Q Consensus       266 ~~~~~-~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~--------~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~  336 (429)
                      +.+++ +.++++|..+| |++|.|+..||..+|.. +|        ...+.+.+..++..+|.|++|.|+|+||+..+..
T Consensus        12 ~~~~~~~~~r~~F~~~d-~~dG~Is~~EL~~~L~~-~~~~~~~~~~~~~s~~~~~~l~~~~D~d~~G~I~~~EF~~~~~~   89 (186)
T d1df0a1          12 NEEDIGDGFRRLFAQLA-GEDAEISAFELQTILRR-VLAKREDIKSDGFSIETCKIMVDMLDEDGSGKLGLKEFYILWTK   89 (186)
T ss_dssp             CCSCSCHHHHHHHHHHH-GGGTCEEHHHHHHHHHH-HHHC----CCCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHHc-CCCCeEcHHHHHHHHHH-hcccccccccccCCHHHHHHHHHHHcCCCCCcccHHHHHHHHHh
Confidence            33343 35788899998 89999999999999954 32        3356788999999999999999999999876543


Q ss_pred             hhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC-----HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          337 VHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS-----IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       337 ~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~-----~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                      .            ..+..+|+.+|+|++|+|+.+||+.+++..|.     +.+++...|.|++|.|+|+||+.+|.+
T Consensus        90 ~------------~~~~~~F~~~D~d~sG~I~~~El~~~l~~~g~~~~~~~~~~~~~~d~d~dg~I~f~eFi~~~~~  154 (186)
T d1df0a1          90 I------------QKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLPCQLHQVIVARFADDELIIDFDNFVRCLVR  154 (186)
T ss_dssp             H------------HHHHHHHHHHCTTCCSCEEGGGHHHHHHHTTEECCHHHHHHHHHHHCCSTTEECHHHHHHHHHH
T ss_pred             H------------HHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhcccHHHHHHHHHHHcCCCCeEeHHHHHHHHHH
Confidence            2            24667999999999999999999999988873     566777899999999999999988754

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

Probab=99.70  E-value=9.2e-18  Score=156.55  Aligned_cols=144  Identities=21%  Similarity=0.306  Sum_probs=117.0

Q ss_pred             cccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcc
Q 014171          263 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE  342 (429)
Q Consensus       263 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~  342 (429)
                      ..++.++...++++|..+|.|++|.|+.+||..+|.. +|..++..++..++..+|.|++|.|+|.||+..+........
T Consensus       114 ~~l~~~~~~~~~~~F~~~D~~~~g~i~~~e~~~~l~~-~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~  192 (321)
T d1ij5a_         114 PMLSEEDTNILRQLFLSSAVSGSGKFSFQDLKQVLAK-YADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLAALVA  192 (321)
T ss_dssp             CCCCHHHHHHHHHHHTSSSSTTSSCCCHHHHHHHHHH-HHTTSCSSHHHHHHHHHHHCCSSTHHHHHHTTSHHHHHTSCC
T ss_pred             ccCCHHHHHHHHHHHHHHcCCCCCeEcHHHHHHHHHH-cCCcccHHHHHHHHHHHhhcCCccccchhhhhhhhhhhhhhH
Confidence            3456788889999999999999999999999999955 788999999999999999999999999999755432111000


Q ss_pred             ---------------------------ccc--------------------------HHHHHHHHHHhccccCCCCCccCH
Q 014171          343 ---------------------------HDS--------------------------EKWHLRSQAAFEKFDIDRDGFITP  369 (429)
Q Consensus       343 ---------------------------~~~--------------------------~~~~~~l~~~F~~~D~~~~G~I~~  369 (429)
                                                 ...                          ......+..+|+.+|.|++|+|+.
T Consensus       193 ~F~~~d~d~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~F~~~D~d~~G~Is~  272 (321)
T d1ij5a_         193 DFRKIDTNSNGTLSRKEFREHFVRLGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFDKSGQLSK  272 (321)
T ss_dssp             CHHHHCTTCCSEECHHHHHHHHHHTTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHHHHHTCSSSCSSEEH
T ss_pred             HHHHHhhcccccchhHHHhhhhhcccccchHHHHHHHHhhhcccccccccccccchhhhhhHHHHHHHHHhcCCCCCCcH
Confidence                                       000                          001123456899999999999999


Q ss_pred             HHHHhhhcCCC-------CHHHHHHHhCCCCCCcccHHHHHHHHH
Q 014171          370 EELRMHTGLKG-------SIDPLLEEADIDKDGRISLSEFRRLLR  407 (429)
Q Consensus       370 ~el~~~~~~~~-------~~~~~~~~~d~~~dg~i~~~ef~~~~~  407 (429)
                      +||+.++...+       ++..+|..+|.|+||.|+|+||+.+|.
T Consensus       273 ~E~~~~l~~~~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~ml  317 (321)
T d1ij5a_         273 EEVQKVLEDAHIPESARKKFEHQFSVVDVDDSKSLSYQEFVMLVL  317 (321)
T ss_dssp             HHHHHHHHHTTCCGGGCSTHHHHHHHHTTTTCSEECHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCcCcHHHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            99999986555       489999999999999999999999985

>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain small (regulatory) subunit (domain VI)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.70  E-value=8.3e-18  Score=142.47  Aligned_cols=127  Identities=23%  Similarity=0.341  Sum_probs=105.2

Q ss_pred             HHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCC--------CccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhh
Q 014171          268 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW--------KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ  339 (429)
Q Consensus       268 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~--------~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~  339 (429)
                      +++++++++|..+| +++|.|+..||+.+|.. +|.        .++.+.+..++..+|.|++|.|+|+||+..+...  
T Consensus         1 ee~~~~r~~F~~~d-~~dg~I~~~EL~~~L~~-~~~~~~~~~~~~~~~~~~~~l~~~~d~d~~g~i~~~ef~~~~~~~--   76 (173)
T d1alva_           1 EEVRQFRRLFAQLA-GDDMEVSATELMNILNK-VVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGKLGFEEFKYLWNNI--   76 (173)
T ss_dssp             CHHHHHHHHHHHHH-GGGTSBCHHHHHHHHHH-HHHTCSTTCCSCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH--
T ss_pred             ChHHHHHHHHHHHc-CCCCcCCHHHHHHHHHH-hCCCcchhhhccCCHHHHHHHHHHhccCCCCcccchhhhhhhhhh--
Confidence            36788999999999 45899999999999965 332        3567889999999999999999999998765322  


Q ss_pred             hcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC-----HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          340 LEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS-----IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       340 ~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~-----~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                                ..+..+|+.||+|++|+|+.+||+.+++..|.     ....+..+|.|++|.|+|+||+.+|..
T Consensus        77 ----------~~~~~~f~~~D~d~~G~I~~~el~~~L~~~g~~~~~~~~~~~~~~d~d~~G~i~~~EF~~~~~~  140 (173)
T d1alva_          77 ----------KKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYSDEGGNMDFDNFISCLVR  140 (173)
T ss_dssp             ----------HHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCCCHHHHHHHHHHHTCSSSCBCHHHHHHHHHH
T ss_pred             ----------hHHHHHHHHhccCCCCeecHHHHHHHHHHHHHhhHHHHHHHhhccccCCCCeEeHHHHHHHHHH
Confidence                      23567899999999999999999999988774     444555677799999999999998854

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=6.8e-18  Score=143.71  Aligned_cols=137  Identities=25%  Similarity=0.384  Sum_probs=105.6

Q ss_pred             cccchHHHhhhhccccccCCCCCCc--------ccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCC-CCCcccHHHHHHH
Q 014171          263 STLDDEELADLRDQFDAIDVDKNGS--------ISLEEMRQALAKDLPWKLKESRVLEILQAIDCN-TDGLVDFSEFVAA  333 (429)
Q Consensus       263 ~~~~~~~~~~l~~~F~~~D~~~~G~--------i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~-~~g~I~~~eF~~~  333 (429)
                      ..++++++..+++.|..++++++|.        ++.++|.... . +..+   .-.++++..+|.+ ++|.|+|+||+.+
T Consensus         9 T~ft~~EI~~l~~~F~~l~~~~~~~~~~~~~~~i~~~e~~~~~-~-l~~~---~~~~rif~~fd~~~~~g~I~f~EFv~~   83 (180)
T d1xo5a_           9 TFLTKQEILLAHRRFCELLPQEQRSVESSLRAQVPFEQILSLP-E-LKAN---PFKERICRVFSTSPAKDSLSFEDFLDL   83 (180)
T ss_dssp             CCSCHHHHHHHHHHHHTTSCGGGCSHHHHHHCCEEHHHHHTSH-H-HHTC---TTHHHHHHHHCCSTTCCEECHHHHHHH
T ss_pred             cCCCHHHHHHHHHHHHHHCcCccccccccccceEcHHHHhcCc-c-cccC---hHHHHHHHhccCCCCCCcCcHHHHHHH
Confidence            4678999999999999998888765        4555554332 1 1111   2357899999987 6999999999988


Q ss_pred             HhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC-----------C----HHHHHHHhCCCCCCccc
Q 014171          334 TLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----------S----IDPLLEEADIDKDGRIS  398 (429)
Q Consensus       334 ~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~-----------~----~~~~~~~~d~~~dg~i~  398 (429)
                      ++......+.     .++++.+|+.||.|++|+|+.+||..++..+.           +    ++.+++++|.|+||.||
T Consensus        84 l~~~~~~~~~-----~~kl~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~dG~Is  158 (180)
T d1xo5a_          84 LSVFSDTATP-----DIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTIN  158 (180)
T ss_dssp             HHHHSTTSCH-----HHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHC------CCCCTTHHHHHHHHHHHHCTTCSSSBC
T ss_pred             HHHHhhcCCH-----HHHHHHhhccccCCCCCeeeHHHHHHHHHHHHhccccccccHHHHHHHHHHHHHHhCCCCCCcCc
Confidence            7665432221     35688899999999999999999998876431           1    56689999999999999


Q ss_pred             HHHHHHHHHhc
Q 014171          399 LSEFRRLLRTA  409 (429)
Q Consensus       399 ~~ef~~~~~~~  409 (429)
                      |+||.+++.+.
T Consensus       159 ~~EF~~~~~~~  169 (180)
T d1xo5a_         159 LSEFQHVISRS  169 (180)
T ss_dssp             HHHHHHHHHHC
T ss_pred             HHHHHHHHHhC
Confidence            99999998864

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=99.68  E-value=6.8e-17  Score=124.74  Aligned_cols=94  Identities=29%  Similarity=0.449  Sum_probs=77.7

Q ss_pred             ccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCC---C-
Q 014171          305 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK---G-  380 (429)
Q Consensus       305 ~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~---~-  380 (429)
                      ++.+++.+++..+|  ++|.|+|+||+.++....  ..      ...++.+|+.||+|++|+|+.+||+.+++..   | 
T Consensus         6 l~~eeI~~~~~~~d--~dG~idf~EF~~~~~~~~--~~------~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~   75 (109)
T d1pvaa_           6 LKADDIKKALDAVK--AEGSFNHKKFFALVGLKA--MS------ANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGR   75 (109)
T ss_dssp             SCHHHHHHHHHHTC--STTCCCHHHHHHHHTCTT--SC------HHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCC
T ss_pred             CCHHHHHHHHHhcC--CCCCCcHHHHHHHHHHcc--CC------HHHHHHHhhCccCCCcCeEcHHHHHHHHHHhhhcCC
Confidence            46788888888875  568899999998764221  11      2357889999999999999999999998765   2 


Q ss_pred             -----CHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          381 -----SIDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       381 -----~~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                           +++.+++.+|.|+||.|+|+||+.+|.+
T Consensus        76 ~ls~~ev~~~~~~~D~d~dG~I~~~EF~~~m~~  108 (109)
T d1pvaa_          76 DLTDAETKAFLKAADKDGDGKIGIDEFETLVHE  108 (109)
T ss_dssp             CCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred             CCCHHHHHHHHHHHCCCCcCcEeHHHHHHHHHh
Confidence                 2888999999999999999999999975

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Sorcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=2.7e-17  Score=139.06  Aligned_cols=127  Identities=19%  Similarity=0.339  Sum_probs=101.2

Q ss_pred             chHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCC-----ccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhh
Q 014171          266 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWK-----LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL  340 (429)
Q Consensus       266 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~-----~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~  340 (429)
                      +.++...++..|+.++ ++||.|+..||+.+|.+ +|..     ++.+.++.+++.+|.|++|.|+|+||+..+...   
T Consensus         2 p~~~~~~~~~~F~~~~-~~dG~Is~~EL~~~L~~-~g~~~~~~~~~~~~v~~l~~~~D~d~~G~I~f~EF~~~~~~~---   76 (172)
T d1juoa_           2 PGQTQDPLYGYFAAVA-GQDGQIDADELQRCLTQ-SGIAGGYKPFNLETCRLMVSMLDRDMSGTMGFNEFKELWAVL---   76 (172)
T ss_dssp             TTCCCCTTHHHHHHHH-TTTTEECHHHHHHHHHH-HTTTCSSCCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH---
T ss_pred             CcchHHHHHHHHHHhC-CCCCCCCHHHHHHHHHH-cCCCCCcccCCHHHHHHHHHHHCCCCCCceehHHHHHHHHhh---
Confidence            4455667889999986 78999999999999965 5544     457889999999999999999999999765422   


Q ss_pred             cccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          341 EEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       341 ~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                               .....+|+.+|.+++|+|+.+|++.++...+.      +..+++++|.  +|.|+|+||+.+|..
T Consensus        77 ---------~~~~~~f~~~D~d~sG~i~~~El~~~l~~~g~~ls~~~~~~l~~~~d~--~g~i~~~eF~~~~~~  139 (172)
T d1juoa_          77 ---------NGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLSPQAVNSIAKRYST--NGKITFDDYIACCVK  139 (172)
T ss_dssp             ---------HHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCCHHHHHHHHHHTCS--SSSEEHHHHHHHHHH
T ss_pred             ---------hhhhHHHHHhCcCCCCcCCHHHHHHHHHHHHHhhhHHHHHHHHHHHHh--cCCcCHHHHHHHHHH
Confidence                     23556899999999999999999999887763      6666776653  466777777776643

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=99.66  E-value=2.1e-16  Score=133.77  Aligned_cols=144  Identities=17%  Similarity=0.228  Sum_probs=112.9

Q ss_pred             HhhhhccccccCCCCCCcccHHHHHHHHHh---hCCCCccHHHH-----------HHHHHHhcCCCCCcccHHHHHHHHh
Q 014171          270 LADLRDQFDAIDVDKNGSISLEEMRQALAK---DLPWKLKESRV-----------LEILQAIDCNTDGLVDFSEFVAATL  335 (429)
Q Consensus       270 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~---~~~~~~~~~~~-----------~~l~~~~d~~~~g~I~~~eF~~~~~  335 (429)
                      .++|+++|+.+|.|++|+|+.+||..++.+   ..+......++           ..++...+.+++|.|++.++...+.
T Consensus         6 ~~~l~~~F~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~   85 (176)
T d1nyaa_           6 SDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVTE   85 (176)
T ss_dssp             HHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHHh
Confidence            356888899999999999999999999854   23434433332           3456667899999999999998765


Q ss_pred             hhhhhccc--ccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC----CHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          336 HVHQLEEH--DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       336 ~~~~~~~~--~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~----~~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                      ........  ........++.+|..+|.|++|.|+.+||+.++...+    +++.+|..+|.|+||.|+|+||+.+|+..
T Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~~~~~~~~~~~f~~~D~d~dG~i~~~Ef~~~~~~~  165 (176)
T d1nyaa_          86 NLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTALGMSKAEAAEAFNQVDTNGNGELSLDELLTAVRDF  165 (176)
T ss_dssp             HHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHTTCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHSCC
T ss_pred             hhhhhhhhhhhHHHHHHHHHHHHHHHccCCChhhhHHHHHHHHHhcCCcHHHHHHHHHHHCCCCCCcEeHHHHHHHHHHH
Confidence            54332111  1112234678899999999999999999999988766    38899999999999999999999999998


Q ss_pred             cccC
Q 014171          410 SISS  413 (429)
Q Consensus       410 ~~~~  413 (429)
                      .+++
T Consensus       166 ~~~~  169 (176)
T d1nyaa_         166 HFGR  169 (176)
T ss_dssp             SSSC
T ss_pred             hcCC
Confidence            8776

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

Probab=99.66  E-value=1.1e-16  Score=123.50  Aligned_cols=95  Identities=27%  Similarity=0.415  Sum_probs=77.9

Q ss_pred             CccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCC---C
Q 014171          304 KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLK---G  380 (429)
Q Consensus       304 ~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~---~  380 (429)
                      -++.+++.+++..+|.  +|.|+|+||+..+..  ...   +   .+.++++|+.||+|++|+|+.+||+.+++..   |
T Consensus         5 ~l~~~di~~~~~~~~~--~G~idf~eF~~~~~~--~~~---~---~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g   74 (109)
T d5pala_           5 VLKADDINKAISAFKD--PGTFDYKRFFHLVGL--KGK---T---DAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHG   74 (109)
T ss_dssp             TSCHHHHHHHHHHTCS--TTCCCHHHHHHHHTC--TTC---C---HHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTC
T ss_pred             HccHHHHHHHHHhcCC--CCcCcHHHHHHHHHh--cCC---C---HHHHHHHHhhhcCCCCCeEcHHHHHHHHHHhhhcc
Confidence            3567889999998864  688999999976531  111   1   2468899999999999999999999887543   3


Q ss_pred             ------CHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          381 ------SIDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       381 ------~~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                            +++++++++|.|+||.|+|+||+++|.+
T Consensus        75 ~~~~~~e~~~~~~~~D~d~dG~I~~~EF~~~m~~  108 (109)
T d5pala_          75 RDLNDTETKALLAAGDSDHDGKIGADEFAKMVAQ  108 (109)
T ss_dssp             CCCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH
T ss_pred             CcCCHHHHHHHHHHhCCCCCCCEeHHHHHHHHHh
Confidence                  2899999999999999999999999976

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=99.61  E-value=1.9e-15  Score=116.13  Aligned_cols=94  Identities=28%  Similarity=0.390  Sum_probs=78.6

Q ss_pred             CccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC---
Q 014171          304 KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG---  380 (429)
Q Consensus       304 ~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~---  380 (429)
                      .+++.++..++...+.  +|.|+|.||+..+..    ... .   .++++.+|+.||+|++|+|+.+||+.+++.++   
T Consensus         4 gls~~di~~~~~~~~~--~gsi~~~eF~~~~~l----~~~-~---~~~l~~~F~~~D~d~~G~I~~~el~~~l~~l~~~~   73 (107)
T d2pvba_           4 GLKDADVAAALAACSA--ADSFKHKEFFAKVGL----ASK-S---LDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSA   73 (107)
T ss_dssp             TSCHHHHHHHHHHTCS--TTCCCHHHHHHHHTG----GGS-C---HHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTS
T ss_pred             CCCHHHHHHHHHhccC--CCCcCHHHHHHHHhc----ccC-C---HHHHHHHHHhhccCCCCcCcHHHHHHHHHHhhccc
Confidence            4578899999999875  467999999976542    111 1   24689999999999999999999999987764   


Q ss_pred             ------CHHHHHHHhCCCCCCcccHHHHHHHHH
Q 014171          381 ------SIDPLLEEADIDKDGRISLSEFRRLLR  407 (429)
Q Consensus       381 ------~~~~~~~~~d~~~dg~i~~~ef~~~~~  407 (429)
                            ++.++++.+|.|+||.|+|+||+.+|+
T Consensus        74 ~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~m~  106 (107)
T d2pvba_          74 RALTDAETKAFLADGDKDGDGMIGVDEFAAMIK  106 (107)
T ss_dssp             CCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             ccCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHc
Confidence                  288999999999999999999999986

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=99.58  E-value=2.5e-15  Score=116.13  Aligned_cols=94  Identities=23%  Similarity=0.329  Sum_probs=77.7

Q ss_pred             ccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC----
Q 014171          305 LKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG----  380 (429)
Q Consensus       305 ~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~----  380 (429)
                      ++.+++.+++..++.  +|.|+|+||+.++...    .. .   ...++.+|+.||+|++|+|+.+||+.++..++    
T Consensus         6 ~~~~~i~~~~~~~~~--~~~i~f~eF~~~~~~~----~~-~---~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~   75 (109)
T d1rwya_           6 LSAEDIKKAIGAFTA--ADSFDHKKFFQMVGLK----KK-S---ADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDAR   75 (109)
T ss_dssp             SCHHHHHHHHHTTCS--TTCCCHHHHHHHHTGG----GS-C---HHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCC
T ss_pred             cCHHHHHHHHHhccc--CCCcCHHHHHHHHccc----cC-C---HHHHHHHhhcccCCCCCcCcHHHHHHHHHHhccccc
Confidence            567889999988754  5789999999876422    11 1   24678899999999999999999999886543    


Q ss_pred             -----CHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          381 -----SIDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       381 -----~~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                           +++.+++.+|.|+||.|+|+||+.+|.+
T Consensus        76 ~~~~~e~~~~~~~~D~d~dG~i~~~EF~~~m~~  108 (109)
T d1rwya_          76 DLSAKETKTLMAAGDKDGDGKIGVEEFSTLVAE  108 (109)
T ss_dssp             CCCHHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred             cCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence                 2889999999999999999999999975

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.54  E-value=7.7e-15  Score=112.94  Aligned_cols=97  Identities=21%  Similarity=0.309  Sum_probs=79.2

Q ss_pred             CCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC
Q 014171          301 LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG  380 (429)
Q Consensus       301 ~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~  380 (429)
                      ++..+++++|..+++..+.  +|.|+|.+|+..+..    ... .   ...++++|+.||+|++|+|+.+||+.++..++
T Consensus         2 ~~d~ls~~dI~~~l~~~~~--~~s~~~~~F~~~~~~----~~~-~---~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~   71 (108)
T d1rroa_           2 ITDILSAEDIAAALQECQD--PDTFEPQKFFQTSGL----SKM-S---ASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQ   71 (108)
T ss_dssp             GGGTSCHHHHHHHHHHTCS--TTCCCHHHHHHHHSG----GGS-C---HHHHHHHHHHHCTTCSSEECTHHHHTGGGGTC
T ss_pred             hhhhCCHHHHHHHHHhccc--CCCccHHHHHHHHcc----CcC-C---HHHHHHHHhhhcCCCCCeEcHHHHHHHHHHHH
Confidence            3456788999999888764  567999999865432    111 1   24688999999999999999999999987653


Q ss_pred             ---------CHHHHHHHhCCCCCCcccHHHHHHHHH
Q 014171          381 ---------SIDPLLEEADIDKDGRISLSEFRRLLR  407 (429)
Q Consensus       381 ---------~~~~~~~~~d~~~dg~i~~~ef~~~~~  407 (429)
                               ++..+++.+|.|+||.|+|+||+.+|+
T Consensus        72 ~~~~~l~~~~~~~~~~~~D~d~dG~I~~~EF~~~m~  107 (108)
T d1rroa_          72 SDARELTESETKSLMDAADNDGDGKIGADEFQEMVH  107 (108)
T ss_dssp             TTSCCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHHT
T ss_pred             hccCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHc
Confidence                     288999999999999999999999986

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.53  E-value=5e-16  Score=133.52  Aligned_cols=99  Identities=20%  Similarity=0.164  Sum_probs=74.5

Q ss_pred             cceeEeeecCCCChHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           38 RKLRRIRLCEGGELLDRILAKKDSRYTEKDAAVVVRQMLRVAAECHLHGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        38 ~~~lv~e~~~gg~L~~~l~~~~~~~l~~~~~~~i~~qil~aL~~lH~~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ..++||||+.++.+.         .+++..+..++.|++.||.|||++||+||||||+|||++    ...++|+|||.|.
T Consensus        84 ~~~lvme~~~~~~~~---------~l~~~~~~~i~~ql~~~l~~lH~~giiHrDiKP~NILv~----~~~~~liDFG~a~  150 (191)
T d1zara2          84 GNAVLMELIDAKELY---------RVRVENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS----EEGIWIIDFPQSV  150 (191)
T ss_dssp             TTEEEEECCCCEEGG---------GCCCSCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE----TTEEEECCCTTCE
T ss_pred             CCEEEEEeecccccc---------chhhHHHHHHHHHHHHHHHHHhhCCEEEccCChhheeee----CCCEEEEECCCcc
Confidence            457999999987653         245566778999999999999999999999999999998    3458999999997


Q ss_pred             eccCCCcccccccCCcccc------cccccCCCCCCcchHHHHHH
Q 014171          118 FIKPGKKFQDIVGSAYYVA------PEVLKRKSGPESDVWSIGVI  156 (429)
Q Consensus       118 ~~~~~~~~~~~~g~~~y~a------PE~~~~~~~~~~DiwslG~i  156 (429)
                      ....+...       .|..      .+.+.+.++.++|+||+.--
T Consensus       151 ~~~~~~~~-------~~l~rd~~~~~~~f~r~y~~~~d~~s~~~~  188 (191)
T d1zara2         151 EVGEEGWR-------EILERDVRNIITYFSRTYRTEKDINSAIDR  188 (191)
T ss_dssp             ETTSTTHH-------HHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_pred             cCCCCCcH-------HHHHHHHHHHHHHHcCCCCCcccHHHHHHH
Confidence            65432211       1111      12344567889999997643

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=99.46  E-value=3.7e-14  Score=103.08  Aligned_cols=73  Identities=25%  Similarity=0.454  Sum_probs=67.8

Q ss_pred             hcccchHHHhhhhccccccCCCC-CCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q 014171          262 ASTLDDEELADLRDQFDAIDVDK-NGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL  335 (429)
Q Consensus       262 ~~~~~~~~~~~l~~~F~~~D~~~-~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~  335 (429)
                      ...++++++++++++|+.+|.++ +|+|+..||..+|. .+|..+++.+++++++.+|.|++|.|+|+||+.++.
T Consensus         6 ~~~ls~eq~~~~~~~F~~fD~d~~~G~I~~~el~~~l~-~lg~~~t~~el~~~i~~~D~d~~G~I~f~eFl~im~   79 (82)
T d1wrka1           6 VEQLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMR-MLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMV   79 (82)
T ss_dssp             HHHCCHHHHHHHHHHHHHHTTTCTTSSBCHHHHHHHHH-HTTCCCCHHHHHHHHHTTCTTCCSSBCHHHHHHHHH
T ss_pred             HhhCCHHHHHHHHHHHHHHcCcCCCCeEeHHHHHHHHH-HcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence            34678999999999999999996 79999999999994 599999999999999999999999999999998875

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

Probab=99.45  E-value=5e-14  Score=102.38  Aligned_cols=69  Identities=28%  Similarity=0.483  Sum_probs=63.1

Q ss_pred             chHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhh
Q 014171          266 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH  336 (429)
Q Consensus       266 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~  336 (429)
                      +++++++++++|+.+|.|++|+|+..||..+|.. +| .++..++..+++.+|.|++|.|+|+||+.++..
T Consensus         1 T~ee~~e~~~~F~~~D~d~~G~I~~~El~~~l~~-lg-~~~~~ei~~~~~~~D~d~~G~I~~~EF~~~~~~   69 (81)
T d2opoa1           1 TPQDIADRERIFKRFDTNGDGKISSSELGDALKT-LG-SVTPDEVRRMMAEIDTDGDGFISFDEFTDFARA   69 (81)
T ss_dssp             CHHHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHT-TT-TCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             CHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH-hh-cCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            4688899999999999999999999999999954 78 689999999999999999999999999987643

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.45  E-value=3e-14  Score=102.66  Aligned_cols=72  Identities=32%  Similarity=0.551  Sum_probs=67.5

Q ss_pred             cccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q 014171          263 STLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL  335 (429)
Q Consensus       263 ~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~  335 (429)
                      +.++++++.+++++|..+|.|++|+|+..||..+|.. +|..+++.++..++..+|.+++|.|+|+||+.++.
T Consensus         2 ~~lt~eqi~el~~~F~~~D~d~~G~I~~~el~~~l~~-~g~~~t~~e~~~~~~~~D~~~~g~I~~~eF~~~m~   73 (77)
T d1f54a_           2 SNLTEEQIAEFKEAFALFDKDNNGSISSSELATVMRS-LGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMS   73 (77)
T ss_dssp             CCCCHHHHHHHHHHHHHTCTTCSSEEEHHHHHHHHHH-HTCCCCHHHHHHHHHTTCCSSCCEEEHHHHHHHHT
T ss_pred             CCCCHHHHHHHHHHHHHHcCCCCCeEChHHHHHHHHH-hCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence            4678999999999999999999999999999999954 89999999999999999999999999999998764

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.45  E-value=5.9e-14  Score=101.98  Aligned_cols=72  Identities=26%  Similarity=0.483  Sum_probs=67.3

Q ss_pred             ccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhh
Q 014171          264 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH  336 (429)
Q Consensus       264 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~  336 (429)
                      .++++++.+++++|..+|.|++|+|+..||..+|. .+|..+++.++++++..+|.|++|.|+|+||+.++..
T Consensus         7 ~Lt~~~i~el~~~F~~~D~d~~G~I~~~el~~~l~-~~g~~~s~~e~~~~~~~~D~d~~g~I~~~eF~~~m~~   78 (81)
T d1avsa_           7 FLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMR-MLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR   78 (81)
T ss_dssp             HBCHHHHHHHHHHHHHHCTTCSSEECHHHHHHHHH-HTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHHHHcCCCCCeEchhHHHHHHH-HcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHH
Confidence            46889999999999999999999999999999995 5999999999999999999999999999999987753

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

Probab=99.45  E-value=3.8e-14  Score=100.88  Aligned_cols=71  Identities=24%  Similarity=0.561  Sum_probs=66.5

Q ss_pred             ccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q 014171          264 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL  335 (429)
Q Consensus       264 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~  335 (429)
                      +++++++.+++++|+.+|.|++|+|+..||..++.. +|..++++++..++..+|.|++|.|+|+||+.++.
T Consensus         1 qLs~eei~el~~~F~~~D~d~~G~I~~~el~~~l~~-~g~~~s~~~~~~~~~~~D~d~~g~I~f~eF~~~m~   71 (73)
T d2pq3a1           1 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRS-LGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMA   71 (73)
T ss_dssp             CCCHHHHHHHHHHHHHTCTTSSSEEEGGGHHHHHHH-TTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred             CcCHHHHHHHHHHHHHHcCCCCceEeHHHHHHHHHH-hCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHh
Confidence            367899999999999999999999999999999955 99999999999999999999999999999998764

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=99.43  E-value=1.6e-14  Score=106.54  Aligned_cols=75  Identities=33%  Similarity=0.686  Sum_probs=69.1

Q ss_pred             HhhhcccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHH
Q 014171          259 RALASTLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAAT  334 (429)
Q Consensus       259 ~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~  334 (429)
                      ..|...++++++..++++|..+|.|++|+|+..||..+|.. +|..+++.+++.+++.+|.|++|.|+|+||+.++
T Consensus        11 ~~ma~~l~~~~i~~l~~~F~~~D~d~~G~I~~~el~~~l~~-lg~~~s~~e~~~l~~~~D~d~~g~I~~~EFl~am   85 (87)
T d1s6ja_          11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKR-VGSELMESEIKDLMDAADIDKSGTIDYGEFIAAT   85 (87)
T ss_dssp             HHSSSSSCSSSTTTTTTHHHHHCTTCSSCEEHHHHHHHHHT-TTSSCCHHHHHHHHHHHCTTCSSEECHHHHTTCC
T ss_pred             HHHHhhCCHHHHHHHHHHHHHHcCCCCCcCcHHHHHHHHHH-cCCCCCHHHHHHHHHHcCCCCCCeEeHHHHHHHH
Confidence            44667888999999999999999999999999999999954 9999999999999999999999999999998654

>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=9e-15  Score=122.75  Aligned_cols=124  Identities=12%  Similarity=0.108  Sum_probs=86.8

Q ss_pred             cCCCCCCcccHHHHHHHHHhhCCCCc--cHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhc
Q 014171          280 IDVDKNGSISLEEMRQALAKDLPWKL--KESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFE  357 (429)
Q Consensus       280 ~D~~~~G~i~~~el~~~l~~~~~~~~--~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~  357 (429)
                      +|.|++|.|+..||.++|.. .+...  +...+..++...|.+++|.|+|+||...+..+...         .++..+|+
T Consensus        16 ~d~n~dG~Is~~el~k~l~~-~~~~~~~~~~~~~~~~~~~D~~~~~~i~F~eF~~~~~~l~~r---------~ei~~~F~   85 (170)
T d2zkmx1          16 MQLNSEGKIPVKNFFQMFPA-DRKRVEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLCPR---------PEIDEIFT   85 (170)
T ss_dssp             HSCCTTSCEEHHHHHHHSCS-CHHHHHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHSCC---------HHHHTTCC
T ss_pred             cccCCCCCCcHHHHHHHHHH-hhhhHHHHHHHHhhhhccccccCCCccCHHHHHHHHhccCCH---------HHHHHHHH
Confidence            69999999999999999832 32221  23455667778899999999999999876544221         24678999


Q ss_pred             cccCCCCCccCHHHHHhhhcCCC----------------CHHHHHHHhCCCCC----CcccHHHHHHHHHhccccC
Q 014171          358 KFDIDRDGFITPEELRMHTGLKG----------------SIDPLLEEADIDKD----GRISLSEFRRLLRTASISS  413 (429)
Q Consensus       358 ~~D~~~~G~I~~~el~~~~~~~~----------------~~~~~~~~~d~~~d----g~i~~~ef~~~~~~~~~~~  413 (429)
                      .||.|++|+||.+||+.++...+                .+..++..++.+.+    |.|++++|..+|.+..++.
T Consensus        86 ~~d~d~~~~it~~el~~fL~~~Q~~~~~~e~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ls~d~F~~fL~S~en~i  161 (170)
T d2zkmx1          86 SYHAKAKPYMTKEHLTKFINQKQRDSRLNSLLFPPARPDQVQGLIDKYEPSGINAQRGQLSPEGMVWFLCGPENSV  161 (170)
T ss_dssp             --------CCCHHHHHHHHHHTCC---------------CHHHHHHHHCCC--------CCHHHHHHHHHSTTSCS
T ss_pred             HHcCCCCCcccHHHHHHHHHHHhcchhhhhhccccCCHHHHHHHHHHHccccccccCCeECHHHHHHHHcCccCCC
Confidence            99999999999999999987543                37778888876644    8899999999998887654

>d1k94a_ a.39.1.8 (A:) Grancalcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Grancalcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=3.1e-13  Score=112.38  Aligned_cols=119  Identities=13%  Similarity=0.139  Sum_probs=65.4

Q ss_pred             hccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHH
Q 014171          274 RDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQ  353 (429)
Q Consensus       274 ~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~  353 (429)
                      +.++..+|.|++|.|+.+||..++..       ..+++.+|+.+|.|++|+|+.+||..++.......+      ...+.
T Consensus        43 ~~li~~~D~~~~G~i~~~EF~~l~~~-------~~~~~~~F~~fD~d~sG~I~~~El~~~l~~~G~~l~------~~~~~  109 (165)
T d1k94a_          43 RIMIAMLDRDHTGKMGFNAFKELWAA-------LNAWKENFMTVDQDGSGTVEHHELRQAIGLMGYRLS------PQTLT  109 (165)
T ss_dssp             HHHHHHHCTTCSSCBCHHHHHHHHHH-------HHHHHHHHHHHCTTCCSBCCHHHHHHHHHHTTCCCC------HHHHH
T ss_pred             HHHHHHhCCCCCCcCcHHHHHHHhhc-------cchhHHHHHHhCCCCCCeEcHHHHHHHHHHhhhcCC------HHHHH
Confidence            33344456666666666666655532       245566666666666666666666555433322111      12344


Q ss_pred             HHhccccCCCCCccCHHHHHhhhcCCCCHHHHHHHhCCCCCCcc--cHHHHHHHHH
Q 014171          354 AAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRI--SLSEFRRLLR  407 (429)
Q Consensus       354 ~~F~~~D~~~~G~I~~~el~~~~~~~~~~~~~~~~~d~~~dg~i--~~~ef~~~~~  407 (429)
                      .+++.+|+  +|.|+.+||...+..+..+.+.|+.+|.|++|.|  +++||++++.
T Consensus       110 ~l~~~~d~--~g~i~~~eFi~~~~~l~~~~~~F~~~D~d~~G~i~l~~~ef~~~~~  163 (165)
T d1k94a_         110 TIVKRYSK--NGRIFFDDYVACCVKLRALTDFFRKRDHLQQGSANFIYDDFLQGTM  163 (165)
T ss_dssp             HHHHHHCB--TTBCBHHHHHHHHHHHHHHHHHHHTTCTTCCSEEEEEHHHHHHHHH
T ss_pred             HHHHHcCC--CCcCcHHHHHHHHHHHHHHHHHHHHhCCCCCCcEEecHHHHHHHHH
Confidence            45555553  3566666666555444334556666666666655  5666666543

>d1df0a1 a.39.1.8 (A:515-700) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), M-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), M-type [TaxId: 10116]

Probab=99.42  E-value=1.6e-13  Score=116.97  Aligned_cols=121  Identities=16%  Similarity=0.129  Sum_probs=98.7

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHH
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR  351 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~  351 (429)
                      .+..++..+|.|++|.|+.+||...+..       ...+..+|..+|.|++|+|+.+|+..++.......+   .    .
T Consensus        62 ~~~~l~~~~D~d~~G~I~~~EF~~~~~~-------~~~~~~~F~~~D~d~sG~I~~~El~~~l~~~g~~~~---~----~  127 (186)
T d1df0a1          62 TCKIMVDMLDEDGSGKLGLKEFYILWTK-------IQKYQKIYREIDVDRSGTMNSYEMRKALEEAGFKLP---C----Q  127 (186)
T ss_dssp             HHHHHHHHHCCSSSSEECHHHHHHHHHH-------HHHHHHHHHHHCTTCCSCEEGGGHHHHHHHTTEECC---H----H
T ss_pred             HHHHHHHHHcCCCCCcccHHHHHHHHHh-------HHHHHHHHHhhCCCCCCcccHHHHHHHHHHHHhccc---H----H
Confidence            3556688889999999999999888743       367889999999999999999999988754432222   1    2


Q ss_pred             HHHHhccccCCCCCccCHHHHHhhhcCCCCHHHHHHHhCCCCCCcc--cHHHHHHHH
Q 014171          352 SQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRI--SLSEFRRLL  406 (429)
Q Consensus       352 l~~~F~~~D~~~~G~I~~~el~~~~~~~~~~~~~~~~~d~~~dg~i--~~~ef~~~~  406 (429)
                      +.++|..+|.|++|.|+.+||..++.....+..+|+.+|.|++|.|  +|.||+.+.
T Consensus       128 ~~~~~~~~d~d~dg~I~f~eFi~~~~~l~~~~~~F~~~D~~~~G~i~l~~~ef~~~~  184 (186)
T d1df0a1         128 LHQVIVARFADDELIIDFDNFVRCLVRLEILFKIFKQLDPENTGTIQLDLISWLSFS  184 (186)
T ss_dssp             HHHHHHHHHCCSTTEECHHHHHHHHHHHHHHHHHHHHHCTTCCSEEEEEHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCeEeHHHHHHHHHHHHHHHHHHHHhCCCCCCcEEecHHHHHHHh
Confidence            4456777899999999999999988777778889999999999986  899999874

>d1alva_ a.39.1.8 (A:) Calpain small (regulatory) subunit (domain VI) {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain small (regulatory) subunit (domain VI)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=99.41  E-value=2.6e-13  Score=114.26  Aligned_cols=121  Identities=17%  Similarity=0.191  Sum_probs=98.3

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHH
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR  351 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~  351 (429)
                      .+...+..+|.|++|.|+.+||..++..       ...+..+|+.+|.+++|.|+..||..++.......   ++    .
T Consensus        48 ~~~~l~~~~d~d~~g~i~~~ef~~~~~~-------~~~~~~~f~~~D~d~~G~I~~~el~~~L~~~g~~~---~~----~  113 (173)
T d1alva_          48 TCRSMVAVMDSDTTGKLGFEEFKYLWNN-------IKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFHL---NE----H  113 (173)
T ss_dssp             HHHHHHHHHCTTCSSSBCHHHHHHHHHH-------HHHHHHHHHHHCTTCCSSBCTTTHHHHHHHHTCCC---CH----H
T ss_pred             HHHHHHHHhccCCCCcccchhhhhhhhh-------hhHHHHHHHHhccCCCCeecHHHHHHHHHHHHHhh---HH----H
Confidence            4556688899999999999999988743       35678899999999999999999988765432221   11    2


Q ss_pred             HHHHhccccCCCCCccCHHHHHhhhcCCCCHHHHHHHhCCCCCCcc--cHHHHHHHH
Q 014171          352 SQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRI--SLSEFRRLL  406 (429)
Q Consensus       352 l~~~F~~~D~~~~G~I~~~el~~~~~~~~~~~~~~~~~d~~~dg~i--~~~ef~~~~  406 (429)
                      ..++|..+|.|++|.|+.+||.+++.....+..+|+.+|.|++|.|  +|+||+.+.
T Consensus       114 ~~~~~~~~d~d~~G~i~~~EF~~~~~~~~~~~~~f~~~D~d~~G~it~~~~efl~~~  170 (173)
T d1alva_         114 LYSMIIRRYSDEGGNMDFDNFISCLVRLDAMFRAFKSLDKDGTGQIQVNIQEWLQLT  170 (173)
T ss_dssp             HHHHHHHHHTCSSSCBCHHHHHHHHHHHHHHHHHHHHHSSSCCSEEEEEHHHHHHHH
T ss_pred             HHHHhhccccCCCCeEeHHHHHHHHHHHHHHHHHHHHhCCCCCCcEEecHHHHHHHH
Confidence            4456777888999999999999998777678889999999999987  689999875

>d1hqva_ a.39.1.8 (A:) Apoptosis-linked protein alg-2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Apoptosis-linked protein alg-2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.40  E-value=4.8e-13  Score=113.38  Aligned_cols=122  Identities=16%  Similarity=0.240  Sum_probs=94.3

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHH
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR  351 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~  351 (429)
                      .+..+|..+|.+++|.|+.+||..++..       ...+...++.+|.+++|.|+.+||..++........      .+.
T Consensus        57 ~~~~l~~~~D~d~~g~i~~~EFl~~~~~-------~~~~~~~f~~~D~~~~G~i~~~el~~~l~~~~~~l~------~e~  123 (181)
T d1hqva_          57 TVRSIISMFDRENKAGVNFSEFTGVWKY-------ITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLS------DQF  123 (181)
T ss_dssp             HHHHHHHHHCCSSSSSBCHHHHHHHHHH-------HHHHHHHHHHHCTTCCSSBCHHHHHHHHHHHTBCCC------HHH
T ss_pred             HHHHHhhccccccccchhhhHHHhhhhh-------ccccccccccccccccchhhhHHHHHHHHHcCCcch------hHH
Confidence            3445577788899999999999888743       356778888899999999999999877654322211      235


Q ss_pred             HHHHhccccCCCCCccCHHHHHhhhcCCCCHHHHHHHhCCCCCCcc--cHHHHHHHH
Q 014171          352 SQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRI--SLSEFRRLL  406 (429)
Q Consensus       352 l~~~F~~~D~~~~G~I~~~el~~~~~~~~~~~~~~~~~d~~~dg~i--~~~ef~~~~  406 (429)
                      +..+++.+|.+++|.|+.+||..++.....+..+|+.+|.++||.|  +++||+.+|
T Consensus       124 ~~~~~~~~d~~~dg~Is~~eF~~~~~~l~~l~~~F~~~D~~~dG~i~~~~~ef~~~~  180 (181)
T d1hqva_         124 HDILIRKFDRQGRGQIAFDDFIQGCIVLQRLTDIFRRYDTDQDGWIQVSYEQYLSMV  180 (181)
T ss_dssp             HHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHHHHHCTTCSSCCCCCHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEecHHHHHHHh
Confidence            6778888999999999999998877666557788888999999965  789998876

>d1y1xa_ a.39.1.8 (A:) Programmed cell death 6 protein-like protein {Leishmania major [TaxId: 5664]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Programmed cell death 6 protein-like protein
species: Leishmania major [TaxId: 5664]

Probab=99.37  E-value=1.4e-12  Score=110.48  Aligned_cols=118  Identities=20%  Similarity=0.224  Sum_probs=76.4

Q ss_pred             ccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHH
Q 014171          275 DQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQA  354 (429)
Q Consensus       275 ~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~  354 (429)
                      .+|..+|.|++|.|+..+|...+..       ...+...|..+|.+++|.|+.+||..++.......   +   ...+..
T Consensus        58 ~l~~~~d~d~~~~i~~~ef~~~~~~-------~~~~~~~F~~~D~~~~g~I~~~el~~~l~~~g~~l---s---~~e~~~  124 (182)
T d1y1xa_          58 KLLHMYDKNHSGEITFDEFKDLHHF-------ILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQV---S---EQTFQA  124 (182)
T ss_dssp             HHHHHHCTTCSSSBCHHHHHHHHHH-------HHHHHHHHHHHCTTSSSCBCHHHHHHHHHTTSCCC---C---HHHHHH
T ss_pred             hhhcccccccccccccccccccccc-------ccccccchhccccccchhhhhHHHHHHHHHhCCch---h---HHHHHH
Confidence            3455667777777777777766632       24566677777777777777777766554321111   1   123556


Q ss_pred             HhccccCCCCCccCHHHHHhhhcCCCCHHHHHHHhCCCCCCcc--cHHHHHHH
Q 014171          355 AFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRI--SLSEFRRL  405 (429)
Q Consensus       355 ~F~~~D~~~~G~I~~~el~~~~~~~~~~~~~~~~~d~~~dg~i--~~~ef~~~  405 (429)
                      +|+.+|.|++|.|+.+||.+++.....+..+|+.+|.+++|.|  +|+||+..
T Consensus       125 i~~~~d~~~dg~I~~~eF~~~~~~l~~~~~~F~~~D~~~~G~is~~~~~f~~~  177 (182)
T d1y1xa_         125 LMRKFDRQRRGSLGFDDYVELSIFVCRVRNVFAFYDRERTGQVTFTFDTFIGG  177 (182)
T ss_dssp             HHHHHCTTCSSSBCHHHHHHHHHHHHHHHHHHHHHCTTCCSEEEEEHHHHHHH
T ss_pred             HHhhcccCCCCCcCHHHHHHHHHHHHHHHHHHHHhCCCCCCcEEeeHHHHHHH
Confidence            7777777777777777777766555556667777777777774  57777753

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.35  E-value=2.8e-13  Score=93.85  Aligned_cols=62  Identities=35%  Similarity=0.617  Sum_probs=58.0

Q ss_pred             hhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHH
Q 014171          271 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAA  333 (429)
Q Consensus       271 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~  333 (429)
                      ++++++|+.+|.|++|+|+.+||+.++. .+|..+++.++..+++.+|.|++|.|+|+||+.+
T Consensus         3 eel~~aF~~fD~d~~G~I~~~el~~~l~-~lg~~~~~~e~~~l~~~~D~d~~g~I~~~eF~~~   64 (65)
T d1fw4a_           3 EEIREAFRVFDKDGNGYISAAELRHVMT-NLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQM   64 (65)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHH-HTTCCCCHHHHHHHHHTTCTTCSSSEEHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCcCCHHHHHHHHH-HhCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHH
Confidence            3578899999999999999999999995 4999999999999999999999999999999875

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.35  E-value=4.3e-13  Score=95.71  Aligned_cols=65  Identities=26%  Similarity=0.440  Sum_probs=60.2

Q ss_pred             hhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhh
Q 014171          271 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH  336 (429)
Q Consensus       271 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~  336 (429)
                      ++++++|+.+|.|++|+|+..||..+|.. +|..+++.+++.+++.+|.|++|+|+|+||+.++..
T Consensus         9 eel~~~F~~fD~~~~G~I~~~el~~~l~~-lg~~~~~~e~~~~~~~~D~d~dg~I~~~EF~~~m~~   73 (75)
T d1jc2a_           9 EELANCFRIFDKNADGFIDIEELGEILRA-TGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG   73 (75)
T ss_dssp             HHHHHHHHHHCCSTTSSEEHHHHHHHHHH-SSSCCCHHHHHHHHHHHCSSSCSEECHHHHHHHHHT
T ss_pred             HHHHHHHHHHcCCCcCeEcHHHHHHHHHh-cCCCccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence            46888999999999999999999999955 999999999999999999999999999999987653

>d1juoa_ a.39.1.8 (A:) Sorcin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Sorcin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.35  E-value=9.4e-13  Score=110.59  Aligned_cols=122  Identities=15%  Similarity=0.186  Sum_probs=95.6

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHH
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR  351 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~  351 (429)
                      .++..+..+|.|++|.|+..||..++..       .......|+.+|.+++|.|+.+|+..++........      ...
T Consensus        48 ~v~~l~~~~D~d~~G~I~f~EF~~~~~~-------~~~~~~~f~~~D~d~sG~i~~~El~~~l~~~g~~ls------~~~  114 (172)
T d1juoa_          48 TCRLMVSMLDRDMSGTMGFNEFKELWAV-------LNGWRQHFISFDTDRSGTVDPQELQKALTTMGFRLS------PQA  114 (172)
T ss_dssp             HHHHHHHHHCTTCSSCEEHHHHHHHHHH-------HHHHHHHHHTTCTTCCSEECHHHHHHHHHHTTCCCC------HHH
T ss_pred             HHHHHHHHHCCCCCCceehHHHHHHHHh-------hhhhhHHHHHhCcCCCCcCCHHHHHHHHHHHHHhhh------HHH
Confidence            3555688889999999999999888743       356778899999999999999999887654332221      134


Q ss_pred             HHHHhccccCCCCCccCHHHHHhhhcCCCCHHHHHHHhCCCCCCcc--cHHHHHHHHHh
Q 014171          352 SQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRI--SLSEFRRLLRT  408 (429)
Q Consensus       352 l~~~F~~~D~~~~G~I~~~el~~~~~~~~~~~~~~~~~d~~~dg~i--~~~ef~~~~~~  408 (429)
                      +..+|+.+|  .+|.|+.+||..++.....+..+|+.+|.|++|.|  +|+||+.++..
T Consensus       115 ~~~l~~~~d--~~g~i~~~eF~~~~~~~~~~~~~f~~~D~d~~G~Itl~~~eFl~~~l~  171 (172)
T d1juoa_         115 VNSIAKRYS--TNGKITFDDYIACCVKLRALTDSFRRRDTAQQGVVNFPYDDFIQCVMS  171 (172)
T ss_dssp             HHHHHHHTC--SSSSEEHHHHHHHHHHHHHHHHHHHHTCTTCCSEEEEEHHHHHHHHTT
T ss_pred             HHHHHHHHH--hcCCcCHHHHHHHHHHHHHHHHHHHHhCCCCCCcEEecHHHHHHHHHc
Confidence            667788886  46889999999888777678889999999999987  88999988753

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=99.34  E-value=3.3e-13  Score=94.30  Aligned_cols=58  Identities=31%  Similarity=0.536  Sum_probs=54.4

Q ss_pred             HHHHHhccccCCCCCccCHHHHHhhhcCCCC-------HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          351 RSQAAFEKFDIDRDGFITPEELRMHTGLKGS-------IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       351 ~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~-------~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                      .++++|+.||+|++|+|+.+||+.+++..|.       ++.++..+|.|+||.|+|+||+.+|.+
T Consensus         3 el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~s~~e~~~~~~~~D~d~dG~i~~~EF~~~m~r   67 (68)
T d1c7va_           3 EILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIKK   67 (68)
T ss_dssp             HHHHHHHHHSCSGGGEECHHHHHHHSSTTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHHC
T ss_pred             HHHHHHHHHcCCCcCeEcHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHh
Confidence            5788999999999999999999999998873       899999999999999999999999976

>d1jc2a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.34  E-value=4.9e-13  Score=95.40  Aligned_cols=60  Identities=33%  Similarity=0.576  Sum_probs=56.0

Q ss_pred             HHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          350 LRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       350 ~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                      +.++.+|+.||+|++|+|+.+||+.+++.+|.      ++.++.++|.|++|.|+|+||+++|.+.
T Consensus         9 eel~~~F~~fD~~~~G~I~~~el~~~l~~lg~~~~~~e~~~~~~~~D~d~dg~I~~~EF~~~m~~~   74 (75)
T d1jc2a_           9 EELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEGV   74 (75)
T ss_dssp             HHHHHHHHHHCCSTTSSEEHHHHHHHHHHSSSCCCHHHHHHHHHHHCSSSCSEECHHHHHHHHHTC
T ss_pred             HHHHHHHHHHcCCCcCeEcHHHHHHHHHhcCCCccHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhC
Confidence            56889999999999999999999999999884      8999999999999999999999999763

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

Probab=99.33  E-value=6.8e-13  Score=96.24  Aligned_cols=60  Identities=32%  Similarity=0.597  Sum_probs=56.2

Q ss_pred             HHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          350 LRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       350 ~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                      +.++++|+.||+|++|+|+.+||+.+++..|.      ++.++..+|.|+||.|+|+||+.+|++.
T Consensus        15 e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~ev~~~~~~~D~d~dg~I~~~EF~~~m~~~   80 (81)
T d1fi5a_          15 EELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKGV   80 (81)
T ss_dssp             HHHHHHHHHHCSSCSSEECHHHHHHHHHTSSSCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHSCC
T ss_pred             HHHHHHHHHHcCCCCCcccHHHHHHHHHhcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHHhc
Confidence            56899999999999999999999999999984      8999999999999999999999999864

>d1fw4a_ a.39.1.5 (A:) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.32  E-value=4.8e-13  Score=92.65  Aligned_cols=57  Identities=37%  Similarity=0.654  Sum_probs=53.2

Q ss_pred             HHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHH
Q 014171          350 LRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLL  406 (429)
Q Consensus       350 ~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~  406 (429)
                      +.++.+|+.||+|++|+|+.+||+.+++.+|.      +..++..+|.|++|.|+|+||+++|
T Consensus         3 eel~~aF~~fD~d~~G~I~~~el~~~l~~lg~~~~~~e~~~l~~~~D~d~~g~I~~~eF~~~m   65 (65)
T d1fw4a_           3 EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM   65 (65)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCSSSEEHHHHHHHC
T ss_pred             HHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHHcCCCCCCcEeHHHHHHHC
Confidence            45889999999999999999999999999884      8999999999999999999999875

>d1fpwa_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.32  E-value=3.7e-12  Score=108.67  Aligned_cols=117  Identities=26%  Similarity=0.367  Sum_probs=94.5

Q ss_pred             hhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcc------cccH
Q 014171          273 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE------HDSE  346 (429)
Q Consensus       273 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~------~~~~  346 (429)
                      ...+|+.+|.+++|.|+..||..++.. ++....++.++.+|+.+|.|++|.|+++||..++........      ....
T Consensus        65 ~~~if~~~D~~~~G~I~~~Ef~~~~~~-~~~~~~~e~~~~~F~~~D~d~dG~is~~E~~~~~~~~~~~~~~~~~~~~~~~  143 (190)
T d1fpwa_          65 ANHLFTVFDKDNNGFIHFEEFITVLST-TSRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEA  143 (190)
T ss_dssp             HHHHHHTCCSSCSSEECHHHHHHHHHH-HSCCCSTHHHHHHHHHHCSSCSSEEEHHHHHHHHHHHHTTSCSTTSSSCCCC
T ss_pred             HHHHHHHhCcCCCCcccHHHHHHHHHH-HccCchHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHHHhcccccCCCchhh
Confidence            345799999999999999999999955 566677889999999999999999999999988765432211      1111


Q ss_pred             HHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCCHHHHHHHhC
Q 014171          347 KWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEAD  390 (429)
Q Consensus       347 ~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~~~~~~~~~d  390 (429)
                      .....+..+|+.+|.|+||.|+.+||++++.....+-+.+..+|
T Consensus       144 ~~~~~v~~if~~~D~d~dG~Is~~EF~~~~~~~p~i~~~l~~~d  187 (190)
T d1fpwa_         144 TPEMRVKKIFKLMDKNEDGYITLDEFREGSKVDPSIIGALNLYD  187 (190)
T ss_dssp             CHHHHHHHHHHHHTTTCSSEEEHHHHHHHHHSSTTHHHHHHHHH
T ss_pred             hHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHCHHHHHHhhhhc
Confidence            22356788999999999999999999999988877777776655

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.30  E-value=7.8e-13  Score=90.25  Aligned_cols=61  Identities=26%  Similarity=0.579  Sum_probs=57.1

Q ss_pred             hhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHH
Q 014171          271 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVA  332 (429)
Q Consensus       271 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~  332 (429)
                      ++++++|+.+|++++|+|+..||..+|.. +|..+++.++..+++.+|.|++|.|+|+||+.
T Consensus         1 Eel~~aF~~fD~~~~G~I~~~el~~~l~~-~g~~~~~~ei~~l~~~~D~d~dg~I~~~eFl~   61 (61)
T d2fcea1           1 EDFVKAFQVFDKESTGKVSVGDLRYMLTG-LGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE   61 (61)
T ss_dssp             HHHHHHHHHHCTTCCSCEEHHHHHHHHHH-TTCCCCHHHHHHHHTTCCCCTTSEECHHHHHH
T ss_pred             ChHHHHHHHHCCCCCCeEeHHHHHHHHHH-cCCCCCHHHHHHHHHHcCCCCCCcEeHHHhcC
Confidence            35788999999999999999999999955 99999999999999999999999999999973

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

Probab=99.29  E-value=1e-12  Score=94.42  Aligned_cols=62  Identities=32%  Similarity=0.462  Sum_probs=57.1

Q ss_pred             HHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          349 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       349 ~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      .+.++++|+.||+|++|+|+.+||+.++..++.      +..++..+|.|++|.|+|+||+++|++..
T Consensus         8 ~e~l~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~~~~e~~~~~~~~D~d~~G~I~~~EF~~~m~k~~   75 (77)
T d1oqpa_           8 REEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKTS   75 (77)
T ss_dssp             HHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHTCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHcCCCCCEechHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHccC
Confidence            457899999999999999999999999998874      89999999999999999999999998764

>d1fi5a_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus), cardiac isoform [TaxId: 9031]

Probab=99.29  E-value=9.7e-13  Score=95.40  Aligned_cols=64  Identities=30%  Similarity=0.482  Sum_probs=59.5

Q ss_pred             hhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q 014171          271 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL  335 (429)
Q Consensus       271 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~  335 (429)
                      ++|+++|+.+|.|++|+|+..||..+|. .+|..++..+++.++..+|.|++|+|+|+||+.++.
T Consensus        15 e~l~~~F~~~D~d~~G~I~~~el~~~l~-~~g~~~~~~ev~~~~~~~D~d~dg~I~~~EF~~~m~   78 (81)
T d1fi5a_          15 EELSDLFRMFDKNADGYIDLEELKIMLQ-ATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK   78 (81)
T ss_dssp             HHHHHHHHHHCSSCSSEECHHHHHHHHH-TSSSCCCHHHHHHHHHHHCSSSSSSEEHHHHHHHHS
T ss_pred             HHHHHHHHHHcCCCCCcccHHHHHHHHH-hcCCCCCHHHHHHHHHHHCCCCCCcEeHHHHHHHHH
Confidence            4688899999999999999999999995 599999999999999999999999999999998663

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.29  E-value=1.6e-12  Score=90.61  Aligned_cols=63  Identities=21%  Similarity=0.451  Sum_probs=58.4

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL  335 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~  335 (429)
                      .++++|+.+|.|++|+|+..||..++. .+|..+++++++.+|..+|.|++|.|+|+||+.++.
T Consensus         2 ~~r~~F~~~D~d~~G~I~~~El~~~l~-~lg~~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~   64 (67)
T d1tiza_           2 SAKRVFEKFDKNKDGKLSLDEFREVAL-AFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIE   64 (67)
T ss_dssp             THHHHHHHHCTTSSSCEEHHHHHHHHH-HTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHH
T ss_pred             hHHHHHHHHCCCCcCcCcHHHHHHHHH-HhccccchHHHHHHHHHhCCCCCCeEeHHHHHHHHH
Confidence            357889999999999999999999995 599999999999999999999999999999998764

>d1qxpa2 a.39.1.8 (A:515-702) Calpain large subunit, C-terminal domain (domain IV) {Rat (Rattus norvegicus), mu-type [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Penta-EF-hand proteins
domain: Calpain large subunit, C-terminal domain (domain IV)
species: Rat (Rattus norvegicus), mu-type [TaxId: 10116]

Probab=99.28  E-value=2.2e-12  Score=109.48  Aligned_cols=119  Identities=17%  Similarity=0.157  Sum_probs=59.5

Q ss_pred             hhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHH
Q 014171          273 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS  352 (429)
Q Consensus       273 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l  352 (429)
                      ++..+..+|.|++|.|+.+||..++..       ...+...|..+|.|++|.|+..||..++.......+   .+   .+
T Consensus        65 ~~~li~~~D~d~~G~i~~~EF~~l~~~-------~~~~~~~F~~~D~d~sG~i~~~El~~~l~~~g~~~~---~~---~~  131 (188)
T d1qxpa2          65 CRSMVNLMDRDGNGKLGLVEFNILWNR-------IRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFKLP---CQ---LH  131 (188)
T ss_dssp             HHHHHHHHCC--CCCCCSSSHHHHHHH-------HHHHHHHHGGGCTTCCSCCBHHHHHHHHHHTTEECC---HH---HH
T ss_pred             HHHHHHHhcCCCCCcccHHHHHHHHhh-------hHHHHHHHHHhCCCCCCEECHHHHHHHHHHhhhcCC---HH---HH
Confidence            344455556666666666666555422       234555666666666666666666554432221111   11   12


Q ss_pred             HHHhccccCCCCCccCHHHHHhhhcCCCCHHHHHHHhCCCCCCcc--cHHHHHHH
Q 014171          353 QAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRI--SLSEFRRL  405 (429)
Q Consensus       353 ~~~F~~~D~~~~G~I~~~el~~~~~~~~~~~~~~~~~d~~~dg~i--~~~ef~~~  405 (429)
                      ..++.. |.|++|.|+.+||..++..+..+..+|+.+|.+++|.|  +++||+.+
T Consensus       132 ~~l~~~-~~~~dg~i~f~eFi~~~~~l~~~~~~F~~~D~~~~G~i~l~~~efl~~  185 (188)
T d1qxpa2         132 QVIVAR-FADDELIIDFDNFVRCLVRLEILFKIFKQLDPENTGTIQLDLISWLSF  185 (188)
T ss_dssp             HHHHHH-TSCSSSBCCHHHHHHHHHHHHHHHHHHHHSCSSCCSCEEEEHHHHHHH
T ss_pred             HHHHHH-hcCCCCcCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEeeHHHHHHH
Confidence            222333 23566666666665555444444455566666666644  56666544

>d1avsa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.27  E-value=2.8e-12  Score=92.86  Aligned_cols=60  Identities=33%  Similarity=0.523  Sum_probs=55.7

Q ss_pred             HHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          350 LRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       350 ~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                      ..++++|+.||+|++|+|+.+||+.+++..|.      +..++..+|.|++|.|+|+||+.+|.+.
T Consensus        14 ~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~e~~~~~~~~D~d~~g~I~~~eF~~~m~~k   79 (81)
T d1avsa_          14 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVRQ   79 (81)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHHTTCCCCHHHHHHHHHHHCTTCCSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCeEchhHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHh
Confidence            45889999999999999999999999998884      8999999999999999999999999764

>d1oqpa_ a.39.1.5 (A:) Caltractin (centrin 2) {Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Caltractin (centrin 2)
species: Green algae (Chlamydomonas reinhardtii) [TaxId: 3055]

Probab=99.27  E-value=1.7e-12  Score=93.18  Aligned_cols=67  Identities=24%  Similarity=0.418  Sum_probs=61.2

Q ss_pred             HHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhh
Q 014171          269 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH  336 (429)
Q Consensus       269 ~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~  336 (429)
                      ..++++++|+.+|.|++|+|+.+||..+|.. +|..++..++..+++.+|.|++|.|+|+||+.++..
T Consensus         7 ~~e~l~~~F~~~D~d~~G~I~~~el~~~l~~-~g~~~~~~e~~~~~~~~D~d~~G~I~~~EF~~~m~k   73 (77)
T d1oqpa_           7 SREEILKAFRLFDDDNSGTITIKDLRRVAKE-LGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKK   73 (77)
T ss_dssp             HHHHHHHHHHHHCTTCSSSEEHHHHHHHHHH-HTCCCCHHHHHHHHHHHCCSSSSEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCCEechHHHHHHHHH-hCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHc
Confidence            3457899999999999999999999999955 899999999999999999999999999999987643

>d2opoa1 a.39.1.10 (A:6-86) Polcalcin Che a 3 {Pigweed (Chenopodium album) [TaxId: 3559]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Polcalcin
domain: Polcalcin Che a 3
species: Pigweed (Chenopodium album) [TaxId: 3559]

Probab=99.27  E-value=3.2e-12  Score=92.55  Aligned_cols=61  Identities=33%  Similarity=0.494  Sum_probs=56.1

Q ss_pred             HHHHHHHhccccCCCCCccCHHHHHhhhcCCCC-----HHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          349 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS-----IDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       349 ~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~-----~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                      ...++++|+.||+|++|+|+.+||+.+++.+|.     +..++..+|.|++|.|+|+||+.+|+..
T Consensus         5 ~~e~~~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~ei~~~~~~~D~d~~G~I~~~EF~~~~~~~   70 (81)
T d2opoa1           5 IADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFISFDEFTDFARAN   70 (81)
T ss_dssp             HHHHHHHHHHHCTTCSSEEEHHHHHHHHHTTTTCCHHHHHHHHHHHCTTCSSEECHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHCCCCCCCCcHHHHHHHHHHhhcCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHC
Confidence            346889999999999999999999999999874     8999999999999999999999999764

>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin-related protein T21P5.17
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.26  E-value=1.9e-12  Score=90.17  Aligned_cols=58  Identities=29%  Similarity=0.505  Sum_probs=53.9

Q ss_pred             HHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          352 SQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       352 l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                      ++++|+.+|+|++|+|+.+||+.+++.+|.      +..++..+|.|+||.|+|+||+.+|.+.
T Consensus         3 ~r~~F~~~D~d~~G~I~~~El~~~l~~lg~~~~~~~i~~~~~~~D~d~dg~I~~~EF~~~m~~~   66 (67)
T d1tiza_           3 AKRVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIEKM   66 (67)
T ss_dssp             HHHHHHHHCTTSSSCEEHHHHHHHHHHTCTTSCHHHHHHHHHHHCCSSSSEECHHHHHHHHHTC
T ss_pred             HHHHHHHHCCCCcCcCcHHHHHHHHHHhccccchHHHHHHHHHhCCCCCCeEeHHHHHHHHHHh
Confidence            567999999999999999999999998884      8999999999999999999999999763

>d1c7va_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=99.26  E-value=9.8e-13  Score=91.80  Aligned_cols=64  Identities=20%  Similarity=0.452  Sum_probs=57.9

Q ss_pred             hhhhccccccCCCCCCcccHHHHHHHHHhhCCCC-ccHHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q 014171          271 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWK-LKESRVLEILQAIDCNTDGLVDFSEFVAATL  335 (429)
Q Consensus       271 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~-~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~  335 (429)
                      ++++++|+.+|.+++|+|+.+||..+| +.+|.. .++.+++.+++.+|.|++|.|+|+||+.++.
T Consensus         2 eel~~~F~~~D~d~~G~I~~~el~~~l-~~~g~~~~s~~e~~~~~~~~D~d~dG~i~~~EF~~~m~   66 (68)
T d1c7va_           2 EEILRAFKVFDANGDGVIDFDEFKFIM-QKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLIK   66 (68)
T ss_dssp             HHHHHHHHHHSCSGGGEECHHHHHHHS-STTTTCCCCHHHHHHHHHHHCSSGGGSEEHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCcCeEcHHHHHHHH-HHhCCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHH
Confidence            357888999999999999999999999 457775 6999999999999999999999999998764

>d1wrka1 a.39.1.5 (A:4-85) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=99.25  E-value=5.1e-12  Score=91.50  Aligned_cols=61  Identities=26%  Similarity=0.463  Sum_probs=55.9

Q ss_pred             HHHHHHHhccccCCC-CCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          349 HLRSQAAFEKFDIDR-DGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       349 ~~~l~~~F~~~D~~~-~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                      ...++++|+.||+|+ +|+|+..||+.+++.+|.      +..++.++|.|++|.|+|+||+.+|.+.
T Consensus        14 ~~~~~~~F~~fD~d~~~G~I~~~el~~~l~~lg~~~t~~el~~~i~~~D~d~~G~I~f~eFl~im~~k   81 (82)
T d1wrka1          14 KNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRS   81 (82)
T ss_dssp             HHHHHHHHHHHTTTCTTSSBCHHHHHHHHHHTTCCCCHHHHHHHHHTTCTTCCSSBCHHHHHHHHHHC
T ss_pred             HHHHHHHHHHHcCcCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHhh
Confidence            356889999999995 799999999999999884      8999999999999999999999999874

>d2fcea1 a.39.1.5 (A:84-144) Calmodulin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.24  E-value=1.9e-12  Score=88.32  Aligned_cols=54  Identities=28%  Similarity=0.470  Sum_probs=50.7

Q ss_pred             HHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHH
Q 014171          351 RSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRR  404 (429)
Q Consensus       351 ~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~  404 (429)
                      .++++|+.||++++|+|+.+||+.+++..|.      +..+++.+|.|++|.|+|+||++
T Consensus         2 el~~aF~~fD~~~~G~I~~~el~~~l~~~g~~~~~~ei~~l~~~~D~d~dg~I~~~eFl~   61 (61)
T d2fcea1           2 DFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE   61 (61)
T ss_dssp             HHHHHHHHHCTTCCSCEEHHHHHHHHHHTTCCCCHHHHHHHHTTCCCCTTSEECHHHHHH
T ss_pred             hHHHHHHHHCCCCCCeEeHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCCCCcEeHHHhcC
Confidence            5788999999999999999999999998884      89999999999999999999985

>d1f54a_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.22  E-value=3.8e-12  Score=91.34  Aligned_cols=60  Identities=32%  Similarity=0.480  Sum_probs=55.5

Q ss_pred             HHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          350 LRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       350 ~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                      ..++++|+.||+|++|+|+.+||+.+++..|.      +..++..+|.|++|.|+|+||+.+|.+.
T Consensus        10 ~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~t~~e~~~~~~~~D~~~~g~I~~~eF~~~m~~~   75 (77)
T d1f54a_          10 AEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLALMSRQ   75 (77)
T ss_dssp             HHHHHHHHHTCTTCSSEEEHHHHHHHHHHHTCCCCHHHHHHHHHTTCCSSCCEEEHHHHHHHHTTS
T ss_pred             HHHHHHHHHHcCCCCCeEChHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHh
Confidence            46889999999999999999999999988874      8999999999999999999999999764

>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Rattus norvegicus [TaxId: 10116]

Probab=99.22  E-value=3.9e-12  Score=90.18  Aligned_cols=59  Identities=32%  Similarity=0.508  Sum_probs=55.2

Q ss_pred             HHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          350 LRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       350 ~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                      ..++++|+.||+|++|+|+.+||+.++...|.      +..++..+|.|++|.|+|+||+.+|.+
T Consensus         8 ~el~~~F~~~D~d~~G~I~~~el~~~l~~~g~~~s~~~~~~~~~~~D~d~~g~I~f~eF~~~m~~   72 (73)
T d2pq3a1           8 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMAR   72 (73)
T ss_dssp             HHHHHHHHHTCTTSSSEEEGGGHHHHHHHTTCCCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCceEeHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHhc
Confidence            46889999999999999999999999998884      899999999999999999999999875

>d1jbaa_ a.39.1.5 (A:) Guanylate cyclase activating protein 2, GCAP-2 {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Guanylate cyclase activating protein 2, GCAP-2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.19  E-value=3.3e-11  Score=102.54  Aligned_cols=115  Identities=17%  Similarity=0.159  Sum_probs=90.5

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhccc--------
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH--------  343 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~--------  343 (429)
                      .+..+|+.+|.|++|.|+..||..++.. +.....+..+..+|+.+|.|++|.|++.||..++.........        
T Consensus        59 ~~~~lf~~~D~d~dG~I~f~Ef~~~l~~-~~~~~~~~~~~~~F~~~D~d~~g~i~~~E~~~~~~~~~~~~~~~~~~~~~~  137 (189)
T d1jbaa_          59 YVEAMFRAFDTNGDNTIDFLEYVAALNL-VLRGTLEHKLKWTFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAE  137 (189)
T ss_dssp             HHHHHHHHHCCSSSSEECHHHHHHHHHH-HSSCCCTHHHHHHHHHHCSSCSSCBCHHHHHHHHHHHHHHHHHSSCCTTSS
T ss_pred             HHHHHHHHhccCCCCeEeehhHHHHHHh-hcccchHHHHHHHHhhhccCCCCcccHhHHHHHHHHHHHhhccccccchhh
Confidence            3566799999999999999999999966 4455567889999999999999999999998876543221100        


Q ss_pred             ---ccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCCHHHHHH
Q 014171          344 ---DSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLE  387 (429)
Q Consensus       344 ---~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~~~~~~~  387 (429)
                         ......+.+..+|+.+|+|+||.||.+||++++.....+..++.
T Consensus       138 ~~~~~~~~e~~~~~if~~~D~d~dG~Is~~EF~~~~~~~p~i~~~l~  184 (189)
T d1jbaa_         138 QQGKLLTPEEVVDRIFLLVDENGDGQLSLNEFVEGARRDKWVMKMLQ  184 (189)
T ss_dssp             TTTCCCCHHHHHHHHHHHHCCSCCSCBCHHHHHHHHTTTTTHHHHHH
T ss_pred             hhccccchHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhCHHHHHHhc
Confidence               00011245678999999999999999999999998887777665

>d1s6ja_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=99.19  E-value=9.5e-13  Score=96.75  Aligned_cols=79  Identities=32%  Similarity=0.406  Sum_probs=64.0

Q ss_pred             CCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHhCCCC
Q 014171          320 NTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEADIDK  393 (429)
Q Consensus       320 ~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~d~~~  393 (429)
                      +.+|+|+.++..  +.  ..+.+.+.    ..++++|+.||+|++|+|+.+||+.+++..|.      +..+++.+|.|+
T Consensus         1 ~~~g~id~~~~~--ma--~~l~~~~i----~~l~~~F~~~D~d~~G~I~~~el~~~l~~lg~~~s~~e~~~l~~~~D~d~   72 (87)
T d1s6ja_           1 HSSGHIDDDDKH--MA--ERLSEEEI----GGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDK   72 (87)
T ss_dssp             CCSSSSSSHHHH--SS--SSSCSSST----TTTTTHHHHHCTTCSSCEEHHHHHHHHHTTTSSCCHHHHHHHHHHHCTTC
T ss_pred             CCCCccCchHHH--HH--hhCCHHHH----HHHHHHHHHHcCCCCCcCcHHHHHHHHHHcCCCCCHHHHHHHHHHcCCCC
Confidence            468999998864  22  22333222    24778999999999999999999999999883      899999999999


Q ss_pred             CCcccHHHHHHHH
Q 014171          394 DGRISLSEFRRLL  406 (429)
Q Consensus       394 dg~i~~~ef~~~~  406 (429)
                      +|.|+|+||+.+|
T Consensus        73 ~g~I~~~EFl~am   85 (87)
T d1s6ja_          73 SGTIDYGEFIAAT   85 (87)
T ss_dssp             SSEECHHHHTTCC
T ss_pred             CCeEeHHHHHHHH
Confidence            9999999998654

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.18  E-value=7.2e-12  Score=89.56  Aligned_cols=60  Identities=30%  Similarity=0.511  Sum_probs=52.6

Q ss_pred             HHHHHHhccccCC--CCCccCHHHHHhhhcCCC--------CHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          350 LRSQAAFEKFDID--RDGFITPEELRMHTGLKG--------SIDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       350 ~~l~~~F~~~D~~--~~G~I~~~el~~~~~~~~--------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                      ++++.+|+.||.+  ++|+|+.+||+.+++.+|        +++.++..+|.|+||.|+|+||+.+|.+.
T Consensus         5 eel~~~F~~fd~~~~~~G~I~~~El~~~l~~lg~~~~~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m~~~   74 (76)
T d1qx2a_           5 EEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKKI   74 (76)
T ss_dssp             HHHHHHHHHHHTSSSCTTSEEHHHHHHHHHHHGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCCCCCEECHHHHHHHHHHhCCcCCCCHHHHHHHHHHhhcCCCCcCcHHHHHHHHHHH
Confidence            4688999999664  479999999999987654        48999999999999999999999999864

>d1jfja_ a.39.1.5 (A:) EHCABP {Entamoeba (Entamoeba histolytica) [TaxId: 5759]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: EHCABP
species: Entamoeba (Entamoeba histolytica) [TaxId: 5759]

Probab=99.16  E-value=5.7e-11  Score=94.86  Aligned_cols=94  Identities=23%  Similarity=0.370  Sum_probs=77.8

Q ss_pred             HHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC--------
Q 014171          310 VLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS--------  381 (429)
Q Consensus       310 ~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~--------  381 (429)
                      .+.+|..+|.|++|.|+++||..++........      ...+..+|+.+|.+++|.|+.+||..++.....        
T Consensus         2 ae~~F~~~D~d~dG~is~~E~~~~l~~~~~~~~------~~~~~~~~~~~D~~~~g~i~~~Ef~~~~~~~~~~~~~~~~~   75 (134)
T d1jfja_           2 AEALFKEIDVNGDGAVSYEEVKAFVSKKRAIKN------EQLLQLIFKSIDADGNGEIDQNEFAKFYGSIQGQDLSDDKI   75 (134)
T ss_dssp             HHHHHHHHCTTCSSEEEHHHHHHHHHTTCCSSH------HHHHHHHHHHHCSSCCSEEEHHHHHHHTTCSSCCSSHHHHH
T ss_pred             HHHHHHHHcCCCcCCCcHHHHHHHHHHcCCCCC------HHHHHHHHHHhhhcccccccccccccccccccccccccccc
Confidence            368999999999999999999887654432221      235778999999999999999999998865532        


Q ss_pred             -HHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          382 -IDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       382 -~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                       +..+|+.+|.|++|.|+.+||..++...
T Consensus        76 ~~~~~F~~~D~~~~g~i~~~el~~~~~~~  104 (134)
T d1jfja_          76 GLKVLYKLMDVDGDGKLTKEEVTSFFKKH  104 (134)
T ss_dssp             HHHHHHHHHCCSSSSEEEHHHHHHHHTTT
T ss_pred             cccccccccccccCCcccHHHHHHHHHhc
Confidence             6779999999999999999999998754

>d1pvaa_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=99.13  E-value=1.2e-10  Score=89.02  Aligned_cols=102  Identities=17%  Similarity=0.229  Sum_probs=72.9

Q ss_pred             chHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhccccc
Q 014171          266 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDS  345 (429)
Q Consensus       266 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~  345 (429)
                      +.+++.++..   .+  +++|.|+..||..++..   ...+..+++++|+.+|.|++|.|+.+|+..++..+......-+
T Consensus         7 ~~eeI~~~~~---~~--d~dG~idf~EF~~~~~~---~~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~ls   78 (109)
T d1pvaa_           7 KADDIKKALD---AV--KAEGSFNHKKFFALVGL---KAMSANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLT   78 (109)
T ss_dssp             CHHHHHHHHH---HT--CSTTCCCHHHHHHHHTC---TTSCHHHHHHHHHHHCTTCSSSBCHHHHHTGGGGTCTTCCCCC
T ss_pred             CHHHHHHHHH---hc--CCCCCCcHHHHHHHHHH---ccCCHHHHHHHhhCccCCCcCeEcHHHHHHHHHHhhhcCCCCC
Confidence            4455444433   33  46689999999877732   2345778999999999999999999999766544322111111


Q ss_pred             HHHHHHHHHHhccccCCCCCccCHHHHHhhhcC
Q 014171          346 EKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL  378 (429)
Q Consensus       346 ~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~  378 (429)
                         ...+..+|+.+|.|+||.|+.+||.+++..
T Consensus        79 ---~~ev~~~~~~~D~d~dG~I~~~EF~~~m~~  108 (109)
T d1pvaa_          79 ---DAETKAFLKAADKDGDGKIGIDEFETLVHE  108 (109)
T ss_dssp             ---HHHHHHHHHHHCTTCSSSBCHHHHHHHHHC
T ss_pred             ---HHHHHHHHHHHCCCCcCcEeHHHHHHHHHh
Confidence               234778899999999999999999988754

>d1s6ca_ a.39.1.5 (A:) Kchip1, Kv4 potassium channel-interacting protein {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Kchip1, Kv4 potassium channel-interacting protein
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.13  E-value=7.3e-11  Score=99.30  Aligned_cols=114  Identities=20%  Similarity=0.288  Sum_probs=86.6

Q ss_pred             hhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhccc------ccH
Q 014171          273 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH------DSE  346 (429)
Q Consensus       273 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~------~~~  346 (429)
                      +..+|..+|.|++|.|+.+||..++.. +.....+..++.+|..+|.+++|.|+.+|+...+.........      ...
T Consensus        53 ~~~lf~~~D~~~~g~I~~~EFl~~~~~-~~~~~~~~~~~~~f~~~D~~~~g~i~~~e~~~~~~~~~~~~~~~~~~~~~~~  131 (178)
T d1s6ca_          53 AHYLFNAFDTTQTGSVKFEDFVTALSI-LLRGTVHEKLRWTFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKED  131 (178)
T ss_dssp             HHHHHHHHCTTCSSCEEHHHHHHHHHH-HHHCCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHTC----------
T ss_pred             HHHHHHHHCCCCCCcccHHHHHHHHHH-HhccchHHHHHHHHHhhccCCCCeecHHHHHHHHHHHHhhcccccccCCcHH
Confidence            345789999999999999999988854 3334567789999999999999999999998776554332110      000


Q ss_pred             HHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCCHHHHHH
Q 014171          347 KWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLE  387 (429)
Q Consensus       347 ~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~~~~~~~  387 (429)
                      .....+..+|+.+|+|+||.||.+||.+.+....++-+++.
T Consensus       132 ~~~~~~~~if~~~D~d~DG~Is~~EF~~~i~~~~~~~~~l~  172 (178)
T d1s6ca_         132 TPRQHVDVFFQKMDKNKDGIVTLDEFLESCQEDDNIMRSLQ  172 (178)
T ss_dssp             -CHHHHHHHHHHHCTTCSSEECHHHHHHHTTSCCHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHCHHHHHHhh
Confidence            11234568999999999999999999999988776665554

>d1omra_ a.39.1.5 (A:) Recoverin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Recoverin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.11  E-value=7.2e-11  Score=101.44  Aligned_cols=119  Identities=19%  Similarity=0.262  Sum_probs=93.7

Q ss_pred             CCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHh-cCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCC
Q 014171          284 KNGSISLEEMRQALAKDLPWKLKESRVLEILQAI-DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDID  362 (429)
Q Consensus       284 ~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~-d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~  362 (429)
                      ..|.|+.+++.... +..  .++..++..+++.| +.+++|.|+++||..++........  .   ...+..+|+.+|.|
T Consensus         4 ~~~~l~~e~l~~l~-~~t--~f~~~ei~~l~~~F~~~~~~G~is~~EF~~~l~~~~~~~~--~---~~~~~~if~~~D~~   75 (201)
T d1omra_           4 KSGALSKEILEELQ-LNT--KFTEEELSSWYQSFLKECPSGRITRQEFQTIYSKFFPEAD--P---KAYAQHVFRSFDAN   75 (201)
T ss_dssp             SSCTHHHHHHHHHG-GGC--SSCHHHHHHHHHHHHHHCTTSEEEHHHHHHHHHHHCTTSC--C---HHHHHHHHHTTTSC
T ss_pred             ccCCCCHHHHHHHH-HhC--CCCHHHHHHHHHHHHHHCcCCCccHHHHHHHHHHhcCCCC--H---HHHHHHHHHHhccC
Confidence            46889999997776 323  47889999999986 6778999999999987654432211  1   12356799999999


Q ss_pred             CCCccCHHHHHhhhcCC------CCHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          363 RDGFITPEELRMHTGLK------GSIDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       363 ~~G~I~~~el~~~~~~~------~~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      ++|.|+.+||...+...      ..+..+|+.+|.|++|.|+++||..+++...
T Consensus        76 ~~G~I~f~EF~~~~~~~~~~~~~~~l~~~F~~~D~d~~G~is~~E~~~~~~~~~  129 (201)
T d1omra_          76 SDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNEVLEIVTAIF  129 (201)
T ss_dssp             SSSEEEHHHHHHHHHHHHSSCGGGSHHHHHHHHCTTCSSSBCHHHHHHHHHHHH
T ss_pred             CCCeEeehhHHHHHHhhcccchHHHHHHHHHHHccCCCCccCHHHHHHHHHHHH
Confidence            99999999998766422      2388999999999999999999999987654

>d1xo5a_ a.39.1.5 (A:) Calcium- and integrin-binding protein, CIB {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium- and integrin-binding protein, CIB
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=8.4e-11  Score=99.04  Aligned_cols=113  Identities=14%  Similarity=0.144  Sum_probs=85.3

Q ss_pred             hccccccCCC-CCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhh---cccccHHHH
Q 014171          274 RDQFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL---EEHDSEKWH  349 (429)
Q Consensus       274 ~~~F~~~D~~-~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~---~~~~~~~~~  349 (429)
                      ..+|+.+|.+ ++|.|+.+||..++....+....++.++.+|+.+|.|++|.|+.+|+..++......   ..-...+..
T Consensus        60 ~rif~~fd~~~~~g~I~f~EFv~~l~~~~~~~~~~~kl~~~F~~~D~d~~G~I~~~el~~~l~~~~~~~~~~~~~~~~~~  139 (180)
T d1xo5a_          60 ERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMK  139 (180)
T ss_dssp             HHHHHHHCCSTTCCEECHHHHHHHHHHHSTTSCHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHC------CCCCTTHH
T ss_pred             HHHHHhccCCCCCCcCcHHHHHHHHHHHhhcCCHHHHHHHhhccccCCCCCeeeHHHHHHHHHHHHhccccccccHHHHH
Confidence            4568888887 699999999999996644555567789999999999999999999999877654211   111112233


Q ss_pred             HHHHHHhccccCCCCCccCHHHHHhhhcCCCCHHHHH
Q 014171          350 LRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLL  386 (429)
Q Consensus       350 ~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~~~~~~  386 (429)
                      ..+..+|+.+|.|++|.|+.+||++++....++-..|
T Consensus       140 ~~v~~~~~~~D~d~dG~Is~~EF~~~~~~~P~~~~~f  176 (180)
T d1xo5a_         140 QLIDNILEESDIDRDGTINLSEFQHVISRSPDFASSF  176 (180)
T ss_dssp             HHHHHHHHHHCTTCSSSBCHHHHHHHHHHCHHHHHHH
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHhCHHHHhhC
Confidence            4467799999999999999999999887655444443

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=3.3e-11  Score=87.71  Aligned_cols=65  Identities=18%  Similarity=0.347  Sum_probs=59.8

Q ss_pred             HHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHH
Q 014171          269 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAAT  334 (429)
Q Consensus       269 ~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~  334 (429)
                      ....+.++|..+|.+++|+|+.+||..+|.. +|..+++.++..++..+|.+++|.|+|.||+..+
T Consensus        18 ~~~~l~~~F~~~D~~~~G~i~~~ef~~~l~~-~~~~l~~~e~~~l~~~~d~~~~g~I~y~eFl~~f   82 (83)
T d1wlza1          18 HYHAITQEFENFDTMKTNTISREEFRAICNR-RVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRF   82 (83)
T ss_dssp             THHHHHHHHHHHCTTCSSCBCHHHHHHHHHH-HTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHCCCCCceEChhHHHHHHHH-hCCCCChhHHHHHhhccccCCCCcEeHHHHHHHh
Confidence            3467889999999999999999999999965 8999999999999999999999999999999754

>d1g8ia_ a.39.1.5 (A:) Frequenin (neuronal calcium sensor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Frequenin (neuronal calcium sensor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=1.7e-11  Score=104.22  Aligned_cols=114  Identities=21%  Similarity=0.254  Sum_probs=86.7

Q ss_pred             hccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhc------ccccHH
Q 014171          274 RDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE------EHDSEK  347 (429)
Q Consensus       274 ~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~------~~~~~~  347 (429)
                      ..+|+.+|.+++|.|+..||..++.. +.....++.++.+|+.+|.|++|.|+.+|+..++.......      +.....
T Consensus        63 ~~if~~~d~~~dg~I~~~EF~~~l~~-~~~~~~~e~l~~~F~~~D~d~dG~i~~~El~~~~~~~~~~~~~~~~~~~~~~~  141 (187)
T d1g8ia_          63 TFVFNVFDENKDGRIEFSEFIQALSV-TSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENT  141 (187)
T ss_dssp             HHHHHHHCTTCSSEEEHHHHHHHHHH-HHHCCHHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHHHHC-----CCGGGSS
T ss_pred             HHHHHHhCcCCCCCCcHHHHHHHHHH-hccCchhhhHHHHHHHHhcCCCCeEcHHHHHHHHHHHhhhhcccccCchhhcc
Confidence            44689999999999999999999855 33344567899999999999999999999988765432211      111111


Q ss_pred             HHHHHHHHhccccCCCCCccCHHHHHhhhcCCCCHHHHHHH
Q 014171          348 WHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEE  388 (429)
Q Consensus       348 ~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~~~~~~~~  388 (429)
                      ..+.+..+|+.+|.|+||.|+.+||++.+.....+.+++..
T Consensus       142 ~~~~v~~if~~~D~d~dG~Is~~EF~~~~~~~p~~~~~l~~  182 (187)
T d1g8ia_         142 PEKRVDRIFAMMDKNADGKLTLQEFQEGSKADPSIVQALSL  182 (187)
T ss_dssp             HHHHHHHHHHHHCSSCSSEEEHHHHHHHHHHCHHHHHHHCC
T ss_pred             HHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHCHHHHHHHHH
Confidence            23457789999999999999999999988776555555443

>d5pala_ a.39.1.4 (A:) Parvalbumin {Leopard shark (Triakis semifasciata) [TaxId: 30493]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Leopard shark (Triakis semifasciata) [TaxId: 30493]

Probab=99.08  E-value=2.7e-10  Score=87.07  Aligned_cols=88  Identities=16%  Similarity=0.239  Sum_probs=57.6

Q ss_pred             CCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCC
Q 014171          284 KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDR  363 (429)
Q Consensus       284 ~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~  363 (429)
                      .+|.|+..||...+.  + ...++++++.+|+.+|.|++|.|+.+|+..++.........-.   ...+..+|+.+|.|+
T Consensus        20 ~~G~idf~eF~~~~~--~-~~~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~g~~~~---~~e~~~~~~~~D~d~   93 (109)
T d5pala_          20 DPGTFDYKRFFHLVG--L-KGKTDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLN---DTETKALLAAGDSDH   93 (109)
T ss_dssp             STTCCCHHHHHHHHT--C-TTCCHHHHHHHHHHHCTTCSSEECHHHHHTHHHHHCTTCCCCC---HHHHHHHHHHHCTTC
T ss_pred             CCCcCcHHHHHHHHH--h-cCCCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHhhhccCcCC---HHHHHHHHHHhCCCC
Confidence            457788888876652  1 2235667888888888888888888888766543322111111   134667788888888


Q ss_pred             CCccCHHHHHhhhc
Q 014171          364 DGFITPEELRMHTG  377 (429)
Q Consensus       364 ~G~I~~~el~~~~~  377 (429)
                      +|.|+.+||..++.
T Consensus        94 dG~I~~~EF~~~m~  107 (109)
T d5pala_          94 DGKIGADEFAKMVA  107 (109)
T ss_dssp             SSSEEHHHHHHHHH
T ss_pred             CCCEeHHHHHHHHH
Confidence            88888888877664

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.08  E-value=1.1e-10  Score=86.56  Aligned_cols=71  Identities=28%  Similarity=0.326  Sum_probs=63.4

Q ss_pred             cchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhh
Q 014171          265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVH  338 (429)
Q Consensus       265 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~  338 (429)
                      +++++.+.++++|+.+|.|++|+|+.+|+..++.+ .+  .+..++..+++.+|.|++|.|+|+||+.++..+.
T Consensus         3 ls~ee~~~y~~~F~~~D~d~~G~i~~~e~~~~l~~-~~--l~~~~l~~i~~~~D~d~dG~l~~~EF~~a~~li~   73 (92)
T d1fi6a_           3 ITDEQRQYYVNQFKTIQPDLNGFIPGSAAKEFFTK-SK--LPILELSHIWELSDFDKDGALTLDEFCAAFHLVV   73 (92)
T ss_dssp             CCHHHHHHHHHHHTTTCCSTTCEEEHHHHHHHHHH-HS--SCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHH-cc--CCHHHHHHHHHHhCCCCCCeecHHHHHHHHHHHH
Confidence            57888999999999999999999999999999976 33  6788999999999999999999999997665443

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=5.3e-11  Score=88.80  Aligned_cols=70  Identities=23%  Similarity=0.234  Sum_probs=62.9

Q ss_pred             cchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhh
Q 014171          265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV  337 (429)
Q Consensus       265 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~  337 (429)
                      +++++.++++++|+.+|.|++|+|+.+|+..++.+ .|  .+..++.++++.+|.|++|.|+|+||+.+|..+
T Consensus         4 lt~~e~~~~~~~F~~~D~d~~G~is~~e~~~~l~~-~~--l~~~~l~~i~~~~D~d~dG~l~~~EF~~am~Li   73 (95)
T d1c07a_           4 VSPAEKAKYDEIFLKTDKDMDGFVSGLEVREIFLK-TG--LPSTLLAHIWSLCDTKDCGKLSKDQFALAFHLI   73 (95)
T ss_dssp             SCSHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHT-TT--CCHHHHHHHHHHHCTTCSSSEETTTHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHh-cC--CCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHH
Confidence            57788899999999999999999999999999965 44  578899999999999999999999999877544

>d2zfda1 a.39.1.5 (A:32-214) Calcineurin B-like protein 2 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin B-like protein 2
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=99.07  E-value=2.1e-10  Score=96.92  Aligned_cols=107  Identities=21%  Similarity=0.225  Sum_probs=83.3

Q ss_pred             hhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhc--ccccHHHHH
Q 014171          273 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLE--EHDSEKWHL  350 (429)
Q Consensus       273 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~--~~~~~~~~~  350 (429)
                      ...+|+.+|.|++|.|+..||..++.........+..++.+|..+|.|++|.|+.+|+..++.......  .........
T Consensus        56 ~~~lf~~~d~~~dg~I~f~EFl~~l~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~e~~~~~~~~~~~~~~~~~~~~~~~  135 (183)
T d2zfda1          56 ADRVFDLFDTKHNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLKDTVIED  135 (183)
T ss_dssp             HHHHHHHHCSSCSSSBCHHHHHHHHHHTSTTSCHHHHHHHHHHHHCTTSSSSEEHHHHHHHHHHHHHHTTCCCCHHHHHH
T ss_pred             HHHHHHHHccCCCCcCcHHHHHHHHHhhhccCcHHHHHHHhhcccccCCCCCccHHHHHHHHHHHHhhhhcccchHHHHH
Confidence            356799999999999999999999865333445567799999999999999999999998765432211  112223344


Q ss_pred             HHHHHhccccCCCCCccCHHHHHhhhcCC
Q 014171          351 RSQAAFEKFDIDRDGFITPEELRMHTGLK  379 (429)
Q Consensus       351 ~l~~~F~~~D~~~~G~I~~~el~~~~~~~  379 (429)
                      .+..+|+.+|.|++|.|+.+||++++...
T Consensus       136 ~~~~if~~~D~d~dG~Is~~EF~~~~~~~  164 (183)
T d2zfda1         136 IIDKTFEEADTKHDGKIDKEEWRSLVLRH  164 (183)
T ss_dssp             HHHHHHHHHCSSCSSEECHHHHHHHHHHS
T ss_pred             HHHHHHHHhCCCCCCeEcHHHHHHHHHHC
Confidence            56789999999999999999999887654

>d1rroa_ a.39.1.4 (A:) Oncomodulin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Oncomodulin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.06  E-value=3.7e-11  Score=91.90  Aligned_cols=67  Identities=27%  Similarity=0.368  Sum_probs=58.4

Q ss_pred             HHHhhhhccccccCCCCCCcccHHHHHHHHHhh--CCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHH
Q 014171          268 EELADLRDQFDAIDVDKNGSISLEEMRQALAKD--LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAAT  334 (429)
Q Consensus       268 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~--~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~  334 (429)
                      ....+++++|+.+|.|++|+|+.+||+.++...  .|..+++++++.+++.+|.|++|.|+|+||+.++
T Consensus        38 ~~~~~l~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~l~~~~~~~~~~~~D~d~dG~I~~~EF~~~m  106 (108)
T d1rroa_          38 MSASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEFQEMV  106 (108)
T ss_dssp             SCHHHHHHHHHHHCTTCSSEECTHHHHTGGGGTCTTSCCCCHHHHHHHHHHHCCSSSSSEEHHHHHHHH
T ss_pred             CCHHHHHHHHhhhcCCCCCeEcHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHH
Confidence            344567889999999999999999999999552  2456889999999999999999999999999865

>d2pvba_ a.39.1.4 (A:) Parvalbumin {Pike (Esox lucius) [TaxId: 8010]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Pike (Esox lucius) [TaxId: 8010]

Probab=99.04  E-value=7.6e-11  Score=89.91  Aligned_cols=64  Identities=30%  Similarity=0.472  Sum_probs=57.4

Q ss_pred             HhhhhccccccCCCCCCcccHHHHHHHHHhhC---CCCccHHHHHHHHHHhcCCCCCcccHHHHHHHH
Q 014171          270 LADLRDQFDAIDVDKNGSISLEEMRQALAKDL---PWKLKESRVLEILQAIDCNTDGLVDFSEFVAAT  334 (429)
Q Consensus       270 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~---~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~  334 (429)
                      ..+++++|+.+|.|++|+|+..||..+++. +   +..+++++++.+++.+|.|++|.|+|+||+.++
T Consensus        39 ~~~l~~~F~~~D~d~~G~I~~~el~~~l~~-l~~~~~~~~~~~~~~l~~~~D~d~dG~I~~~EF~~~m  105 (107)
T d2pvba_          39 LDDVKKAFYVIDQDKSGFIEEDELKLFLQN-FSPSARALTDAETKAFLADGDKDGDGMIGVDEFAAMI  105 (107)
T ss_dssp             HHHHHHHHHHHCTTCSSSBCHHHHHTGGGG-TCTTSCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHH
T ss_pred             HHHHHHHHHhhccCCCCcCcHHHHHHHHHH-hhcccccCCHHHHHHHHHHhCCCCCCcEeHHHHHHHH
Confidence            346889999999999999999999999855 5   456899999999999999999999999999765

>d1bjfa_ a.39.1.5 (A:) Neurocalcin {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Neurocalcin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.03  E-value=2.2e-10  Score=96.51  Aligned_cols=108  Identities=19%  Similarity=0.282  Sum_probs=84.3

Q ss_pred             hhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhccc------ccH
Q 014171          273 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEH------DSE  346 (429)
Q Consensus       273 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~------~~~  346 (429)
                      ...+|..+|.+++|.|+..||..++.. .-....++.+..+|+.+|.|++|.|+.+||..++.........      ...
T Consensus        61 ~~~lf~~~d~~~~g~i~~~eFl~~~~~-~~~~~~~~~~~~~f~~~D~d~dg~i~~~E~~~~~~~~~~~~~~~~~~~~~~~  139 (181)
T d1bjfa_          61 AEHVFRTFDANGDGTIDFREFIIALSV-TSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDES  139 (181)
T ss_dssp             HHHHHHHHCSSCSSEEEHHHHHHHHHH-HTSSCHHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHTTCCCTTTSCGGGS
T ss_pred             HHHHHHhcCCCCCCcEeHHHHHHHHHH-HhhhchHHHHHHHHHHhccCCCCeecHHHHHHHHHHHhhhccccccCCcccc
Confidence            455689999999999999999999865 3344567789999999999999999999999887654332110      111


Q ss_pred             HHHHHHHHHhccccCCCCCccCHHHHHhhhcCCCC
Q 014171          347 KWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS  381 (429)
Q Consensus       347 ~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~  381 (429)
                      .....+..+|+.+|.|+||.|+.+||.+.+....+
T Consensus       140 ~~~~~~~~if~~~D~d~dG~Is~~EF~~~~~~~p~  174 (181)
T d1bjfa_         140 TPEKRTEKIFRQMDTNRDGKLSLEEFIRGAKSDPS  174 (181)
T ss_dssp             SHHHHHHHHHHHSCTTCSSEECHHHHHHHHHHCTH
T ss_pred             cHHHHHHHHHHHhCCCCCCcEeHHHHHHHHHhCHH
Confidence            12345778999999999999999999998876543

>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Nucleobindin 1 (CALNUC)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=3.6e-11  Score=90.61  Aligned_cols=59  Identities=20%  Similarity=0.303  Sum_probs=51.0

Q ss_pred             HHHHhccccCCCCCccCHHHHHhhhcCCC----------------------CHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          352 SQAAFEKFDIDRDGFITPEELRMHTGLKG----------------------SIDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       352 l~~~F~~~D~~~~G~I~~~el~~~~~~~~----------------------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                      ++.+|+.||.|+||+|+++||+.++...+                      .+..+|..+|.|+||.|||+||++++++.
T Consensus        18 ~r~~F~~~D~DgdG~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~DG~Is~~EF~~~~~~~   97 (99)
T d1snla_          18 PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLASTQRK   97 (99)
T ss_dssp             HHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHHHCC
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHHHHHhcchhhhhhhhhhhhHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHHhcC
Confidence            46789999999999999999998885321                      16779999999999999999999999875


Q ss_pred             c
Q 014171          410 S  410 (429)
Q Consensus       410 ~  410 (429)
                      .
T Consensus        98 e   98 (99)
T d1snla_          98 E   98 (99)
T ss_dssp             C
T ss_pred             C
Confidence            4

>d1qx2a_ a.39.1.1 (A:) Calbindin D9K {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.01  E-value=6.1e-11  Score=84.59  Aligned_cols=65  Identities=26%  Similarity=0.423  Sum_probs=53.8

Q ss_pred             hhhhccccccCCC--CCCcccHHHHHHHHHhhCCCCcc--HHHHHHHHHHhcCCCCCcccHHHHHHHHhh
Q 014171          271 ADLRDQFDAIDVD--KNGSISLEEMRQALAKDLPWKLK--ESRVLEILQAIDCNTDGLVDFSEFVAATLH  336 (429)
Q Consensus       271 ~~l~~~F~~~D~~--~~G~i~~~el~~~l~~~~~~~~~--~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~  336 (429)
                      ++++++|+.||.+  ++|+|+.+||..+|.. +|..++  ..+++++++.+|.|++|.|+|+||+.++..
T Consensus         5 eel~~~F~~fd~~~~~~G~I~~~El~~~l~~-lg~~~~~~~~ei~~~~~~~D~d~dG~I~f~EF~~~m~~   73 (76)
T d1qx2a_           5 EEIKGAFEVFAAKEGDPNQISKEELKLVMQT-LGPSLLKGMSTLDEMIEEVDKNGDGEVSFEEFLVMMKK   73 (76)
T ss_dssp             HHHHHHHHHHHTSSSCTTSEEHHHHHHHHHH-HGGGSCTTSCSHHHHHHHHCTTCSSEECHHHHHHHHHH
T ss_pred             HHHHHHHHHHcccCCCCCEECHHHHHHHHHH-hCCcCCCCHHHHHHHHHHhhcCCCCcCcHHHHHHHHHH
Confidence            4577888888543  5799999999999965 676654  457999999999999999999999987654

>d1exra_ a.39.1.5 (A:) Calmodulin {Ciliate (Paramecium tetraurelia) [TaxId: 5888]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Ciliate (Paramecium tetraurelia) [TaxId: 5888]

Probab=99.00  E-value=4.5e-10  Score=91.00  Aligned_cols=100  Identities=23%  Similarity=0.356  Sum_probs=75.5

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHH
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLR  351 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~  351 (429)
                      .+..+|..+|.+++|.|+..||..++..........+.+..+|+.+|.|++|.|+..||...+........      .+.
T Consensus        46 ~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~i~~~e~~~~l~~~~~~~~------~~~  119 (146)
T d1exra_          46 ELQDMINEVDADGNGTIDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLT------DDE  119 (146)
T ss_dssp             HHHHHHHHHCTTCSSSEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCSSCBCHHHHHHHHHHTTCCCC------HHH
T ss_pred             HHHHHHHhcCCCCCCcccHHHHHHHHHHHhhccChHHHHHHHHHHhCCCCCCcCCHHHHHHHHHHHhhcCC------HHH
Confidence            34556788899999999999998887543332334567888999999999999999999877654332211      235


Q ss_pred             HHHHhccccCCCCCccCHHHHHhhhc
Q 014171          352 SQAAFEKFDIDRDGFITPEELRMHTG  377 (429)
Q Consensus       352 l~~~F~~~D~~~~G~I~~~el~~~~~  377 (429)
                      +..+|+.+|.|++|.|+.+||.+++.
T Consensus       120 ~~~i~~~~D~d~dG~i~~~eF~~~l~  145 (146)
T d1exra_         120 VDEMIREADIDGDGHINYEEFVRMMV  145 (146)
T ss_dssp             HHHHHHHHCSSSSSSBCHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCeEeHHHHHHHhc
Confidence            77889999999999999999988764

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]

Probab=99.00  E-value=1.1e-10  Score=86.06  Aligned_cols=61  Identities=25%  Similarity=0.444  Sum_probs=53.0

Q ss_pred             HHHHHHHhccccCCCCCccCHHHHHhhhcCCC-----------CHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          349 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-----------SIDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       349 ~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~-----------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      .+.+..+|..||.| +|+|+++||+.++....           .+++++..+|.|+||.|+|+||+.+|.+..
T Consensus         8 ie~l~~~F~~yd~d-dG~is~~El~~~l~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l~   79 (92)
T d1a4pa_           8 METMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLT   79 (92)
T ss_dssp             HHHHHHHHHHHHGG-GCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCC-CCEEcHHHHHHHHHHhccccccccCCHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHH
Confidence            45688999999987 89999999999986432           389999999999999999999999987654

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

Probab=99.00  E-value=2.8e-10  Score=84.95  Aligned_cols=62  Identities=16%  Similarity=0.285  Sum_probs=52.9

Q ss_pred             HHHHHHHhccc-cCCCC-CccCHHHHHhhhcCCC--------CHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          349 HLRSQAAFEKF-DIDRD-GFITPEELRMHTGLKG--------SIDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       349 ~~~l~~~F~~~-D~~~~-G~I~~~el~~~~~~~~--------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      ...+..+|..| |+||+ |+|+.+||++++...+        .+++++..+|.|+||.|+|+||+.+|.+..
T Consensus        13 i~~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~~~~~~v~~l~~~~D~d~DG~IdF~EF~~l~~~l~   84 (98)
T d1yuta1          13 IETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGELA   84 (98)
T ss_dssp             HHHHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTTCCSSCHHHHHHHHCTTCCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCCCCCEEcHHHHHHHHHHhccccCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHH
Confidence            35678899887 77875 9999999999986432        399999999999999999999999997654

>d1rwya_ a.39.1.4 (A:) Parvalbumin {Rat (Rattus rattus) [TaxId: 10117]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Parvalbumin
domain: Parvalbumin
species: Rat (Rattus rattus) [TaxId: 10117]

Probab=98.99  E-value=7.2e-10  Score=84.77  Aligned_cols=103  Identities=17%  Similarity=0.161  Sum_probs=67.6

Q ss_pred             cchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccc
Q 014171          265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD  344 (429)
Q Consensus       265 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~  344 (429)
                      ++.+++.++...   ++  .+|.|+..||..++.. .  ..+..+++.+|+.+|.|++|.|+.+||..++..+.......
T Consensus         6 ~~~~~i~~~~~~---~~--~~~~i~f~eF~~~~~~-~--~~~~~~~~~~F~~~D~d~~G~I~~~El~~~l~~l~~~~~~~   77 (109)
T d1rwya_           6 LSAEDIKKAIGA---FT--AADSFDHKKFFQMVGL-K--KKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDL   77 (109)
T ss_dssp             SCHHHHHHHHHT---TC--STTCCCHHHHHHHHTG-G--GSCHHHHHHHHHHHSTTCSSEECHHHHHTHHHHHCTTCCCC
T ss_pred             cCHHHHHHHHHh---cc--cCCCcCHHHHHHHHcc-c--cCCHHHHHHHhhcccCCCCCcCcHHHHHHHHHHhccccccC
Confidence            344554444433   33  4477888888777632 1  23466788888888888888888888887765443322111


Q ss_pred             cHHHHHHHHHHhccccCCCCCccCHHHHHhhhcC
Q 014171          345 SEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGL  378 (429)
Q Consensus       345 ~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~  378 (429)
                      .   ...+..+|+.+|.|+||.|+.+||.+++..
T Consensus        78 ~---~~e~~~~~~~~D~d~dG~i~~~EF~~~m~~  108 (109)
T d1rwya_          78 S---AKETKTLMAAGDKDGDGKIGVEEFSTLVAE  108 (109)
T ss_dssp             C---HHHHHHHHHHHCTTCSSSEEHHHHHHHHHT
T ss_pred             C---HHHHHHHHHHhCCCCCCeEeHHHHHHHHHh
Confidence            1   134667788888888888888888877653

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

Probab=98.98  E-value=2.9e-10  Score=84.29  Aligned_cols=71  Identities=27%  Similarity=0.397  Sum_probs=59.4

Q ss_pred             HHHhhhhcccccc-CCCCC-CcccHHHHHHHHHhhCC----CCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhh
Q 014171          268 EELADLRDQFDAI-DVDKN-GSISLEEMRQALAKDLP----WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVH  338 (429)
Q Consensus       268 ~~~~~l~~~F~~~-D~~~~-G~i~~~el~~~l~~~~~----~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~  338 (429)
                      ..++.+.++|..+ |.||+ |+|+.+||+.+|....+    ...+..+++++++.+|.|+||.|+|+||+.++..+.
T Consensus         6 ~~i~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm~~l~   82 (93)
T d1zfsa1           6 TAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALT   82 (93)
T ss_dssp             HHHHHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTTCCSEECSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence            4457889999988 88875 99999999999976432    346788999999999999999999999998875543

>d1zfsa1 a.39.1.2 (A:1-93) Calcyclin (S100) {Rat (Rattus norvegicus), s100a1 [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Rat (Rattus norvegicus), s100a1 [TaxId: 10116]

Probab=98.98  E-value=1.7e-10  Score=85.61  Aligned_cols=62  Identities=19%  Similarity=0.269  Sum_probs=52.9

Q ss_pred             HHHHHHHhccc-cCCCC-CccCHHHHHhhhcCCC-----------CHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          349 HLRSQAAFEKF-DIDRD-GFITPEELRMHTGLKG-----------SIDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       349 ~~~l~~~F~~~-D~~~~-G~I~~~el~~~~~~~~-----------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      .+.+.++|..| |+||+ |+|+++||++++...+           .+.++++.+|.|+||.|+|+||+.+|.+..
T Consensus         8 i~~l~~~F~~y~d~dg~~G~is~~El~~~L~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~Idf~EF~~lm~~l~   82 (93)
T d1zfsa1           8 METLINVFHAHSGKEGDKYKLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALT   82 (93)
T ss_dssp             HHHHHHHHHHHGGGSSCCSSEEHHHHHHHHHHHSTTTSCCSSCHHHHHHHHHHHTTTCCSEECSHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCCCCCEecHHHHHHHHHHhcccccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence            35688899888 88875 9999999999986543           288999999999999999999999997654

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.98  E-value=1.2e-10  Score=83.14  Aligned_cols=60  Identities=27%  Similarity=0.464  Sum_probs=51.9

Q ss_pred             HHHHHHhccccC-C-CCCccCHHHHHhhhcCCC--------CHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          350 LRSQAAFEKFDI-D-RDGFITPEELRMHTGLKG--------SIDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       350 ~~l~~~F~~~D~-~-~~G~I~~~el~~~~~~~~--------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                      +.++.+|..||. + ++|+|+.+||+.+++...        +++.++..+|.|+||.|+|+||+.+|.+.
T Consensus         7 ~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D~d~dG~Idf~EF~~l~~~l   76 (78)
T d1cb1a_           7 AELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKKI   76 (78)
T ss_dssp             HHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence            568899999975 3 469999999999887652        38999999999999999999999999864

>d1auib_ a.39.1.5 (B:) Calcineurin regulatory subunit (B-chain) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcineurin regulatory subunit (B-chain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.97  E-value=6.7e-10  Score=92.02  Aligned_cols=105  Identities=19%  Similarity=0.194  Sum_probs=82.7

Q ss_pred             hccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHH
Q 014171          274 RDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQ  353 (429)
Q Consensus       274 ~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~  353 (429)
                      .++|..+|.+++|.|+.+||..++............+..+|..+|.|++|.|+.+|+...+...... .-........+.
T Consensus        51 ~~l~~~~d~~~~g~i~~~EFl~~~~~~~~~~~~~~~~~~~f~~~d~d~~g~Is~~el~~~l~~~~~~-~~~~~~~~~~~~  129 (165)
T d1auib_          51 QRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGN-NLKDTQLQQIVD  129 (165)
T ss_dssp             HHHHHHHCTTCSSSEEHHHHHHHHGGGCTTCCHHHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHTT-SSCHHHHHHHHH
T ss_pred             HHHHHHHccccchhhhhhhhhhhccccccchhhHHHHHHHHHHhcccccccccHHHHHHHHHHhccc-cCchHHHHHHHH
Confidence            3468888999999999999999996644555566779999999999999999999999876543221 111222344567


Q ss_pred             HHhccccCCCCCccCHHHHHhhhcCC
Q 014171          354 AAFEKFDIDRDGFITPEELRMHTGLK  379 (429)
Q Consensus       354 ~~F~~~D~~~~G~I~~~el~~~~~~~  379 (429)
                      .+|..+|.|++|.|+.+||.+++...
T Consensus       130 ~~~~~~D~~~dG~Is~~EF~~i~~~~  155 (165)
T d1auib_         130 KTIINADKDGDGRISFEEFCAVVGGL  155 (165)
T ss_dssp             HHHHHHCTTSSSSEEHHHHHHHHGGG
T ss_pred             HHHHHcCCCCCCcEeHHHHHHHHhcC
Confidence            89999999999999999999988744

>d1yuta1 a.39.1.2 (A:1-98) Calcyclin (S100) {Human (Homo sapiens), s100a13 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a13 [TaxId: 9606]

Probab=98.97  E-value=2.4e-10  Score=85.33  Aligned_cols=71  Identities=18%  Similarity=0.323  Sum_probs=59.3

Q ss_pred             HHHhhhhcccccc-CCCCC-CcccHHHHHHHHHhhCC-CCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhh
Q 014171          268 EELADLRDQFDAI-DVDKN-GSISLEEMRQALAKDLP-WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVH  338 (429)
Q Consensus       268 ~~~~~l~~~F~~~-D~~~~-G~i~~~el~~~l~~~~~-~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~  338 (429)
                      ..+..+.++|+.| |.+|+ |+|+..||+.+|....+ ...+...++++++.+|.|+||.|+|+||+.++....
T Consensus        11 ~~i~~l~~vF~~y~d~dg~~g~is~~El~~~l~~~~~~~~~~~~~v~~l~~~~D~d~DG~IdF~EF~~l~~~l~   84 (98)
T d1yuta1          11 ESIETVVTTFFTFARQEGRKDSLSVNEFKELVTQQLPHLLKDVGSLDEKMKSLDVNQDSELKFNEYWRLIGELA   84 (98)
T ss_dssp             HHHHHHHHHHHHHHTTSSSSSCBCHHHHHHHHHHHCTTTTCCSSCHHHHHHHHCTTCCSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcccCCCCCEEcHHHHHHHHHHhccccCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHH
Confidence            4567899999998 77875 99999999999977554 345666799999999999999999999998876543

>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]

Probab=98.97  E-value=3.2e-10  Score=85.15  Aligned_cols=75  Identities=24%  Similarity=0.329  Sum_probs=58.8

Q ss_pred             HHHHHHHhccccCCCCCccCHHHHHhhhcCCC-------------CHHHHHHHhCCCCCCcccHHHHHHHHHhcc----c
Q 014171          349 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKG-------------SIDPLLEEADIDKDGRISLSEFRRLLRTAS----I  411 (429)
Q Consensus       349 ~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~-------------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~----~  411 (429)
                      ...+..+|..|| +++|.|+++||+.+++...             .++++|+.+|.|+||.|+|+||+.+|.+..    -
T Consensus         9 i~~l~~~F~~y~-~~dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l~~~~~~   87 (100)
T d1psra_           9 IIGMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGDIATDYHK   87 (100)
T ss_dssp             HHHHHHHHHHTC-CTTSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHc-CCCCcccHHHHHHHHHHHccccccccccCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHHHHHHH
Confidence            345677888887 7899999999999987542             378999999999999999999999997753    1


Q ss_pred             cCCCCCCCCCCCC
Q 014171          412 SSRNVPPSPSGHR  424 (429)
Q Consensus       412 ~~~~~~~~~~~~~  424 (429)
                      .....+|.++|+|
T Consensus        88 ~~~~~~~~~~~~~  100 (100)
T d1psra_          88 QSHGAAPCSGGSQ  100 (100)
T ss_dssp             HTTTCCSCCCCCC
T ss_pred             HHcCCCCCCCCCC
Confidence            2234557777764

>d1wlza1 a.39.1.7 (A:229-311) DJ-1-binding protein, DJBP {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: DJ-1-binding protein, DJBP
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.97  E-value=2e-10  Score=83.42  Aligned_cols=57  Identities=25%  Similarity=0.394  Sum_probs=52.4

Q ss_pred             HHHHHHhccccCCCCCccCHHHHHhhhcCCC------CHHHHHHHhCCCCCCcccHHHHHHHH
Q 014171          350 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SIDPLLEEADIDKDGRISLSEFRRLL  406 (429)
Q Consensus       350 ~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~------~~~~~~~~~d~~~dg~i~~~ef~~~~  406 (429)
                      ..+.++|+.+|.+++|+|+.+||++++...+      +++.++..+|.|++|.|+|.||+..+
T Consensus        20 ~~l~~~F~~~D~~~~G~i~~~ef~~~l~~~~~~l~~~e~~~l~~~~d~~~~g~I~y~eFl~~f   82 (83)
T d1wlza1          20 HAITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFLSRF   82 (83)
T ss_dssp             HHHHHHHHHHCTTCSSCBCHHHHHHHHHHHTCCCCHHHHHHHHTTSCBCTTSCBCHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCceEChhHHHHHHHHhCCCCChhHHHHHhhccccCCCCcEeHHHHHHHh
Confidence            4588899999999999999999999998777      38999999999999999999999875

>d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]

Probab=98.95  E-value=1.9e-10  Score=83.81  Aligned_cols=71  Identities=20%  Similarity=0.393  Sum_probs=61.9

Q ss_pred             hHHHhhhhcccccc-CCCCCCc-ccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhh
Q 014171          267 DEELADLRDQFDAI-DVDKNGS-ISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV  337 (429)
Q Consensus       267 ~~~~~~l~~~F~~~-D~~~~G~-i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~  337 (429)
                      +..+..+..+|+.+ |.+|+|. ++.+||+.++...+|...++.+++++++.+|.|+||.|+|+||+.++..+
T Consensus         6 E~ai~~ii~~F~kya~~dG~~~~l~~~Elk~ll~~e~~~~~~~~~v~~i~~~~D~n~DG~IdF~EF~~l~~~l   78 (87)
T d1xk4a1           6 EKALNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKM   78 (87)
T ss_dssp             HHHHHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcccCCCCCccCHHHHHHHHHHhcCCccchHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence            34567888999888 8999985 58999999998778888888899999999999999999999999877643

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

Probab=98.93  E-value=5.7e-10  Score=82.38  Aligned_cols=70  Identities=19%  Similarity=0.363  Sum_probs=58.5

Q ss_pred             HHHhhhhcccccc-CCCCCC-cccHHHHHHHHHhh----CCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhh
Q 014171          268 EELADLRDQFDAI-DVDKNG-SISLEEMRQALAKD----LPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV  337 (429)
Q Consensus       268 ~~~~~l~~~F~~~-D~~~~G-~i~~~el~~~l~~~----~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~  337 (429)
                      ..+..+.++|+.+ |.||+| +|+.+||+.+|...    ++...++++++++++.+|.|+||.|+|+||+.++..+
T Consensus         6 ~~i~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm~~l   81 (93)
T d3c1va1           6 KALDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCI   81 (93)
T ss_dssp             HHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHH
Confidence            4567889999998 667654 79999999999663    3456788999999999999999999999999877554

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=6.5e-10  Score=82.57  Aligned_cols=70  Identities=24%  Similarity=0.349  Sum_probs=61.8

Q ss_pred             cchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhh
Q 014171          265 LDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVH  338 (429)
Q Consensus       265 ~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~  338 (429)
                      +++++..+++++|+.+| +++|+|+.+|+..+|.+ .|  .+..+++.|++.+|.|++|.|+++||+.++..+.
T Consensus         4 ls~ee~~~y~~~F~~~D-~~~G~i~~~el~~~l~~-~g--l~~~~L~~Iw~~~D~~~dG~l~~~EF~~a~~Li~   73 (95)
T d2jxca1           4 VKPEDKAKYDAIFDSLS-PVNGFLSGDKVKPVLLN-SK--LPVDILGRVWELSDIDHDGMLDRDEFAVAMFLVY   73 (95)
T ss_dssp             SCHHHHHHHHHHHHHTC-CBTTEEEHHHHHHHHTT-SS--CCHHHHHHHHHHHCTTCSSEEEHHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHhC-CCCCceeHHHHHHHHHH-cC--CCHHHHHHHHHHhcCCCCCeEcHHHHHHHHHHHH
Confidence            57888899999999999 89999999999999954 44  5678999999999999999999999998766543

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a3 [TaxId: 9606]

Probab=98.93  E-value=5.6e-10  Score=82.19  Aligned_cols=72  Identities=21%  Similarity=0.345  Sum_probs=60.8

Q ss_pred             hHHHhhhhcccccc-CCCCCC-cccHHHHHHHHHhhCC----CCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhh
Q 014171          267 DEELADLRDQFDAI-DVDKNG-SISLEEMRQALAKDLP----WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVH  338 (429)
Q Consensus       267 ~~~~~~l~~~F~~~-D~~~~G-~i~~~el~~~l~~~~~----~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~  338 (429)
                      +..+..+..+|+.+ |.+|+| +|+.+||+.+|...++    ...+..++.++++.+|.|+||.|+|+||+.++..+.
T Consensus         5 E~~i~~i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l~~~l~   82 (93)
T d1ksoa_           5 EQAVAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACLC   82 (93)
T ss_dssp             HHHHHHHHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHH
Confidence            45567889999987 999999 5999999999976443    345688999999999999999999999998776543

>d1ksoa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a3 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a3 [TaxId: 9606]

Probab=98.93  E-value=2.6e-10  Score=83.98  Aligned_cols=63  Identities=16%  Similarity=0.203  Sum_probs=54.1

Q ss_pred             HHHHHHHhccc-cCCCCC-ccCHHHHHhhhcCCC-----------CHHHHHHHhCCCCCCcccHHHHHHHHHhccc
Q 014171          349 HLRSQAAFEKF-DIDRDG-FITPEELRMHTGLKG-----------SIDPLLEEADIDKDGRISLSEFRRLLRTASI  411 (429)
Q Consensus       349 ~~~l~~~F~~~-D~~~~G-~I~~~el~~~~~~~~-----------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~  411 (429)
                      ...+..+|..| |++|+| +|+++||+++++...           .+.++++.+|.|+||.|+|+||+.+|.+..+
T Consensus         8 i~~i~~vF~kya~~dGd~~~ls~~Elk~ll~~~~~~~~~~~~~~~~~~~~~~~lD~n~Dg~IdF~EF~~l~~~l~~   83 (93)
T d1ksoa_           8 VAAIVCTFQEYAGRCGDKYKLCQAELKELLQKELATWTPTEFRECDYNKFMSVLDTNKDCEVDFVEYVRSLACLCL   83 (93)
T ss_dssp             HHHHHHHHHHHHTSSSCTTCEEHHHHHHHHHHHTTTCCCCTTCHHHHHHHHHHHHHTTTCEECHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcCcCCCCCeECHHHHHHHHHHhhhcccccCCCHHHHHHHHHHHcCCCCCCCcHHHHHHHHHHHHH
Confidence            35678899887 999999 599999999986432           2899999999999999999999999987664

>d1c07a_ a.39.1.6 (A:) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.92  E-value=4.6e-10  Score=83.55  Aligned_cols=58  Identities=24%  Similarity=0.312  Sum_probs=52.9

Q ss_pred             HHHHHHhccccCCCCCccCHHHHHhhhcCCCC----HHHHHHHhCCCCCCcccHHHHHHHHH
Q 014171          350 LRSQAAFEKFDIDRDGFITPEELRMHTGLKGS----IDPLLEEADIDKDGRISLSEFRRLLR  407 (429)
Q Consensus       350 ~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~----~~~~~~~~d~~~dg~i~~~ef~~~~~  407 (429)
                      .+++++|+.+|+|++|+|+.+|++.++...+-    +..+++.+|.|+||.|+++||+.+|.
T Consensus        10 ~~~~~~F~~~D~d~~G~is~~e~~~~l~~~~l~~~~l~~i~~~~D~d~dG~l~~~EF~~am~   71 (95)
T d1c07a_          10 AKYDEIFLKTDKDMDGFVSGLEVREIFLKTGLPSTLLAHIWSLCDTKDCGKLSKDQFALAFH   71 (95)
T ss_dssp             HHHHHHHHHHCTTCSSEECHHHHHHHHHTTTCCHHHHHHHHHHHCTTCSSSEETTTHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCCCcHHHHHHHHHhcCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHH
Confidence            46788999999999999999999999988873    88999999999999999999997764

>d3c1va1 a.39.1.2 (A:2-94) Calcyclin (S100) {Human (Homo sapiens), s100a4 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a4 [TaxId: 9606]

Probab=98.92  E-value=5.1e-10  Score=82.64  Aligned_cols=63  Identities=16%  Similarity=0.260  Sum_probs=52.8

Q ss_pred             HHHHHHHhccc-cCCCCC-ccCHHHHHhhhcCCC-----------CHHHHHHHhCCCCCCcccHHHHHHHHHhccc
Q 014171          349 HLRSQAAFEKF-DIDRDG-FITPEELRMHTGLKG-----------SIDPLLEEADIDKDGRISLSEFRRLLRTASI  411 (429)
Q Consensus       349 ~~~l~~~F~~~-D~~~~G-~I~~~el~~~~~~~~-----------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~  411 (429)
                      .+.+..+|..| |+|++| +|+.+||+++++...           +++++++++|.|+||.|+|+||+.+|.+..+
T Consensus         8 i~~l~~~F~~ya~~dg~~~~L~~~Elk~~l~~~~~~~~~~~~~~~~~~~i~~~~D~n~DG~I~F~EF~~lm~~l~~   83 (93)
T d3c1va1           8 LDVMVSTFHKYSGKEGDKFKLNKSELKELLTRELPSFLGKRTDEAAFQKLMSNLDSNRDNEVDFQEYCVFLSCIAM   83 (93)
T ss_dssp             HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHCHHHHTTCCSHHHHHHHHHHHCTTCSSSEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHccCCCCCCeeCHHHHHHHHHHhchhccccCCCHHHHHHHHHHHcCCCCCCCCHHHHHHHHHHHHH
Confidence            35688999998 667654 799999999987532           2889999999999999999999999987654

>d1xk4a1 a.39.1.2 (A:1-87) Calcyclin (S100) {Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin s100a8, MRP8 [TaxId: 9606]

Probab=98.91  E-value=8.2e-10  Score=80.31  Aligned_cols=63  Identities=19%  Similarity=0.261  Sum_probs=53.9

Q ss_pred             HHHHHHHhccc-cCCCCCcc-CHHHHHhhhcC-CC------CHHHHHHHhCCCCCCcccHHHHHHHHHhccc
Q 014171          349 HLRSQAAFEKF-DIDRDGFI-TPEELRMHTGL-KG------SIDPLLEEADIDKDGRISLSEFRRLLRTASI  411 (429)
Q Consensus       349 ~~~l~~~F~~~-D~~~~G~I-~~~el~~~~~~-~~------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~  411 (429)
                      .+.+..+|..| |+||+|.+ +.+||+.++.. .+      .++++++++|.|+||.|+|+||+.+|.+..+
T Consensus         9 i~~ii~~F~kya~~dG~~~~l~~~Elk~ll~~e~~~~~~~~~v~~i~~~~D~n~DG~IdF~EF~~l~~~la~   80 (87)
T d1xk4a1           9 LNSIIDVYHKYSLIKGNFHAVYRDDLKKLLETESPQYIRKKGADVWFKELDINTDGAVNFQEFLILVIKMGV   80 (87)
T ss_dssp             HHHHHHHHHHHHTSSSCTTCBCHHHHHHHHHHHSCHHHHTTCHHHHHHHHCTTCSSSBCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCCCCCccCHHHHHHHHHHhcCCccchHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHH
Confidence            35678899888 99999965 99999998864 34      4999999999999999999999999987653

>d1cb1a_ a.39.1.1 (A:) Calbindin D9K {Pig (Sus scrofa) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calbindin D9K
domain: Calbindin D9K
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=98.91  E-value=1.1e-10  Score=83.35  Aligned_cols=70  Identities=24%  Similarity=0.430  Sum_probs=57.2

Q ss_pred             HHHhhhhccccccCC-C-CCCcccHHHHHHHHHhhCC-CCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhh
Q 014171          268 EELADLRDQFDAIDV-D-KNGSISLEEMRQALAKDLP-WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV  337 (429)
Q Consensus       268 ~~~~~l~~~F~~~D~-~-~~G~i~~~el~~~l~~~~~-~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~  337 (429)
                      ...++++.+|+.||. + +.|+|+.+||+.+|...++ ...+.++++++++.+|.|+||.|+|+||+.++..+
T Consensus         4 ~~~~~l~~~F~~y~~~d~~~g~is~~Elk~ll~~~~~~~~~~~~~v~~~~~~~D~d~dG~Idf~EF~~l~~~l   76 (78)
T d1cb1a_           4 KSPAELKSIFEKYAAKEGDPNQLSKEELKQLIQAEFPSLLKGPRTLDDLFQELDKNGDGEVSFEEFQVLVKKI   76 (78)
T ss_dssp             CCHHHHHHHHHHHHTTSSSTTEECHHHHHHHHHHHCSSCCSSCCCSSHHHHHTCCCSSSSEEHHHHHHHHHHH
T ss_pred             hhHHHHHHHHHHHccCCCCCCEECHHHHHHHHHHHcCCCCCCHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHH
Confidence            345678899999964 3 4589999999999977543 45566789999999999999999999999876543

>d1a4pa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), P11 s100a10, calpactin [TaxId: 9606]

Probab=98.90  E-value=2.1e-10  Score=84.59  Aligned_cols=70  Identities=21%  Similarity=0.364  Sum_probs=58.1

Q ss_pred             HHHhhhhccccccCCCCCCcccHHHHHHHHHhhCC----CCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhh
Q 014171          268 EELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP----WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVH  338 (429)
Q Consensus       268 ~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~----~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~  338 (429)
                      ..++.+..+|+.+|.| +|+|+.+||..+|....+    ...+...++++++.+|.|+||.|+|+||+..+..+.
T Consensus         6 ~~ie~l~~~F~~yd~d-dG~is~~El~~~l~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l~   79 (92)
T d1a4pa_           6 HAMETMMFTFHKFAGD-KGYLTKEDLRVLMEKEFPGFLENQKDPLAVDKIMKDLDQCRDGKVGFQSFFSLIAGLT   79 (92)
T ss_dssp             HHHHHHHHHHHHHHGG-GCSBCHHHHHHHHHHHCHHHHHHSCCTTHHHHHHHHHCTTSSSCBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCC-CCEEcHHHHHHHHHHhccccccccCCHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHH
Confidence            4567899999999977 899999999999965332    234567899999999999999999999998775543

>d2obha1 a.39.1.5 (A:26-166) Calmodulin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=1.8e-09  Score=86.69  Aligned_cols=98  Identities=14%  Similarity=0.269  Sum_probs=74.8

Q ss_pred             hhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHH
Q 014171          273 LRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRS  352 (429)
Q Consensus       273 l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l  352 (429)
                      +...+..+|.+++|.|+..||...+...........++..+|..+|.+++|.|+..+|..++........      ...+
T Consensus        44 ~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~~~~l~~~f~~~d~~~~G~i~~~el~~~l~~~g~~l~------~~e~  117 (141)
T d2obha1          44 IKKMISEIDKEGTGKMNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLT------DEEL  117 (141)
T ss_dssp             HHHHHHHHTTTCCSEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCSSSBCHHHHHHHHHHTTCCCC------HHHH
T ss_pred             HHHHHHhhccCCCCeechHHHHHHHHHHHhhhccHHHHHHHHHHhcccCCCCccHHHHHHHHHHhCCCCC------HHHH
Confidence            4455777799999999999998888553333334567888999999999999999999887654322111      2357


Q ss_pred             HHHhccccCCCCCccCHHHHHhhh
Q 014171          353 QAAFEKFDIDRDGFITPEELRMHT  376 (429)
Q Consensus       353 ~~~F~~~D~~~~G~I~~~el~~~~  376 (429)
                      ..+|+.+|.|++|.|+.+||.+++
T Consensus       118 ~~l~~~~D~d~dG~i~~~EF~~~m  141 (141)
T d2obha1         118 QEMIDEADRDGDGEVSEQEFLRIM  141 (141)
T ss_dssp             HHHHHHHCTTSSSSBCHHHHHHHH
T ss_pred             HHHHHHHCCCCCCCEeHHHHHHhC
Confidence            788999999999999999998764

>d1dtla_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.85  E-value=9e-10  Score=90.26  Aligned_cols=65  Identities=29%  Similarity=0.469  Sum_probs=57.9

Q ss_pred             HhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q 014171          270 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL  335 (429)
Q Consensus       270 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~  335 (429)
                      .+++..+|+.+|.+++|+|+.+||..++ ..+|..+++++++.+++.+|.|++|.|+|+||+..+.
T Consensus        90 ~~~l~~~F~~~D~d~~G~I~~~e~~~~~-~~~~~~ls~~e~~~i~~~~D~d~dG~I~~~eF~~~l~  154 (156)
T d1dtla_          90 EEELSDLFRMFDKNADGYIDLEELKIML-QATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMK  154 (156)
T ss_dssp             HHHHHHHHHHHCTTCSSEEEHHHHGGGG-TTC--CCCHHHHHHHHHHHCTTSSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHHhCcCCCCcCcHHHHHHHH-hhcCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHHc
Confidence            3568889999999999999999999999 5589999999999999999999999999999998663

>d2mysc_ a.39.1.5 (C:) Myosin Regulatory Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.85  E-value=4.2e-09  Score=85.02  Aligned_cols=98  Identities=16%  Similarity=0.067  Sum_probs=76.0

Q ss_pred             HHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccC--CCCCccCHHHHHhhhcCCC----
Q 014171          307 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDI--DRDGFITPEELRMHTGLKG----  380 (429)
Q Consensus       307 ~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~--~~~G~I~~~el~~~~~~~~----  380 (429)
                      .++++++|..+|.|++|+|+++||..++..+....+      ...+..++..+|.  +++|.|+.+||..++....    
T Consensus         3 ~eelke~F~~~D~d~~G~I~~~el~~~l~~lg~~~~------~~e~~~~~~~~~~d~~~~g~i~~~eF~~~~~~~~~~~~   76 (145)
T d2mysc_           3 ADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPT------NAEINKILGNPSKEEMNAAAITFEEFLPMLQAAANNKD   76 (145)
T ss_pred             HHHHHHHHHHHcCCCCCeECHHHHHHHHHHhhhcch------hhhhHHHHHHHhhcccccCccchhHHHHHHhhhhhccc
Confidence            468999999999999999999999987754322111      1235556666654  4789999999988775432    


Q ss_pred             -----CHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          381 -----SIDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       381 -----~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                           ++..+|+.+|.|++|.|+.+||..+|....
T Consensus        77 ~~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g  111 (145)
T d2mysc_          77 QGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLG  111 (145)
T ss_pred             cchHHHHHHHHHHhhcCCCCEEcHHHHHHHHHHhC
Confidence                 277899999999999999999999998653

>d1wdcb_ a.39.1.5 (B:) Myosin Essential Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=98.85  E-value=9.3e-09  Score=82.63  Aligned_cols=89  Identities=7%  Similarity=0.052  Sum_probs=43.6

Q ss_pred             CCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCC
Q 014171          283 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDID  362 (429)
Q Consensus       283 ~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~  362 (429)
                      +++|.|+..+|..++...+....+.+++...|+.+|.+++|+|+.+||..++.......+      ...+.++|+.+|.|
T Consensus        51 ~~~~~i~~~eF~~~~~~~~~~~~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~~g~~lt------~~e~~~l~~~~d~~  124 (142)
T d1wdcb_          51 EAPGPLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFN------KDEMRMTFKEAPVE  124 (142)
T ss_dssp             TSSSCCCHHHHHHHHHHHTCSCCCHHHHHHHHHTTCTTCCSCEEHHHHHHHHHHSSSCCC------HHHHHHHHHHCCEE
T ss_pred             hccCccccccccccccccccccchhhhHHHhhhhhcccCCCcccHHHHHHHHHHccccCC------HHHHHHHHHHhCCC
Confidence            344555555555555444444444455555555555555555555555554433211111      12344455555554


Q ss_pred             CCCccCHHHHHhhhcC
Q 014171          363 RDGFITPEELRMHTGL  378 (429)
Q Consensus       363 ~~G~I~~~el~~~~~~  378 (429)
                       +|.|+.+||.++++.
T Consensus       125 -~G~I~y~eF~~~l~~  139 (142)
T d1wdcb_         125 -GGKFDYVKFTAMIKG  139 (142)
T ss_dssp             -TTEECHHHHHHHHHT
T ss_pred             -CCEEcHHHHHHHHhc
Confidence             355555555555543

>d1m45a_ a.39.1.5 (A:) Myosin Light Chain Mlc1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Light Chain Mlc1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.84  E-value=1.2e-09  Score=88.39  Aligned_cols=64  Identities=27%  Similarity=0.571  Sum_probs=59.0

Q ss_pred             hhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q 014171          271 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL  335 (429)
Q Consensus       271 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~  335 (429)
                      +.+.++|+.+|.+++|+|+.+||..+|.. +|..++++++..+++.+|.|++|.|+|+||+..+.
T Consensus        81 ~~l~~~F~~~D~~~~G~I~~~el~~~l~~-~g~~l~~~ei~~l~~~~D~d~dG~I~y~eF~~~i~  144 (146)
T d1m45a_          81 EDFVKAFQVFDKESTGKVSVGDLRYMLTG-LGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDVL  144 (146)
T ss_dssp             HHHHHHHHTTCSSSSSEEEHHHHHHHHHH-STTCCCHHHHHHHHTTCCCCTTSEEEHHHHHHHHH
T ss_pred             HHHHHHHHhhccccccccchhhhhhhhcc-cCCcchHHHHHHHHHHhCCCCCCcEEHHHHHHHHH
Confidence            46788899999999999999999999965 89999999999999999999999999999997653

>d1fi6a_ a.39.1.6 (A:) Reps1 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Reps1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.84  E-value=1.6e-09  Score=80.08  Aligned_cols=58  Identities=24%  Similarity=0.363  Sum_probs=52.1

Q ss_pred             HHHHHHhccccCCCCCccCHHHHHhhhcCCC----CHHHHHHHhCCCCCCcccHHHHHHHHH
Q 014171          350 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLR  407 (429)
Q Consensus       350 ~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~----~~~~~~~~~d~~~dg~i~~~ef~~~~~  407 (429)
                      ..++++|+.+|+|++|+|+.+|++.++...+    ++..+++.+|.|+||.|+|+||+.+|+
T Consensus         9 ~~y~~~F~~~D~d~~G~i~~~e~~~~l~~~~l~~~~l~~i~~~~D~d~dG~l~~~EF~~a~~   70 (92)
T d1fi6a_           9 QYYVNQFKTIQPDLNGFIPGSAAKEFFTKSKLPILELSHIWELSDFDKDGALTLDEFCAAFH   70 (92)
T ss_dssp             HHHHHHHTTTCCSTTCEEEHHHHHHHHHHHSSCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCcccchhHHHHHHHHHHccCCHHHHHHHHHHhCCCCCCeecHHHHHHHHH
Confidence            4678899999999999999999999998776    388899999999999999999986554

>d1topa_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.83  E-value=3.4e-09  Score=87.26  Aligned_cols=66  Identities=26%  Similarity=0.438  Sum_probs=59.7

Q ss_pred             HHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q 014171          269 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL  335 (429)
Q Consensus       269 ~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~  335 (429)
                      ....++++|+.+|.|++|+|+..||..++.. .+...+.+++..+|+.+|.|++|.|+|+||+..+.
T Consensus        94 ~~~~~~~aF~~~D~d~~G~Is~~e~~~~l~~-~~~~~~~~~~~~l~~~~D~d~dG~Is~~EF~~~l~  159 (162)
T d1topa_          94 SEEELANCFRIFDKNADGFIDIEELGEILRA-TGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMME  159 (162)
T ss_dssp             HHHHHHHHHHHHCTTCSSCBCHHHHHHHHHT-TTCCCCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             cHHHHHHHHHHHCCCCCCCCcHHHHHHHHHh-hCCCCCHHHHHHHHHHhCCCCCCcEEHHHHHHHHH
Confidence            3456778899999999999999999999965 88899999999999999999999999999998764

>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a6 [TaxId: 9606]

Probab=98.82  E-value=1e-09  Score=80.05  Aligned_cols=71  Identities=23%  Similarity=0.406  Sum_probs=60.1

Q ss_pred             hHHHhhhhcccccc-CCCCCC-cccHHHHHHHHHhhC--CCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhh
Q 014171          267 DEELADLRDQFDAI-DVDKNG-SISLEEMRQALAKDL--PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV  337 (429)
Q Consensus       267 ~~~~~~l~~~F~~~-D~~~~G-~i~~~el~~~l~~~~--~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~  337 (429)
                      +..+..+..+|+.+ |++|+| +|+..||+..+...+  +...++.++.++++.+|.|+||.|+|+||+.++..+
T Consensus         5 E~ai~~ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD~d~Dg~IdF~EF~~l~~~l   79 (89)
T d1k8ua_           5 DQAIGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGAL   79 (89)
T ss_dssp             HHHHHHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcccCCCCCeecHHHHHHHHHHHHHhhccCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence            34567888999988 999999 699999999997643  445667889999999999999999999999877654

>d1ggwa_ a.39.1.5 (A:) Cdc4p {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Cdc4p
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=98.80  E-value=1.5e-09  Score=87.27  Aligned_cols=64  Identities=30%  Similarity=0.531  Sum_probs=58.5

Q ss_pred             HhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q 014171          270 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL  335 (429)
Q Consensus       270 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~  335 (429)
                      .+.+.++|+.+|.+++|+|+.+||..+|.. +|..+++++++.+++.+|.+ +|.|+|+||+..+.
T Consensus        75 ~~~l~~aF~~~D~d~~G~I~~~el~~~l~~-~g~~lt~~e~~~l~~~~d~~-dG~I~y~eF~~~m~  138 (140)
T d1ggwa_          75 PEEFVKGFQVFDKDATGMIGVGELRYVLTS-LGEKLSNEEMDELLKGVPVK-DGMVNYHDFVQMIL  138 (140)
T ss_dssp             HHHHHHHHHTTCSSCSSCCCHHHHHHHHHH-HHSCSCHHHHHHHHHHTTCS-SCCSTTTHHHHHHH
T ss_pred             HHHHHHHHHHHhccCCCcchHHHHHHHHHH-cCCCCCHHHHHHHHHhhCCC-CCEEeHHHHHHHHh
Confidence            456889999999999999999999999965 89999999999999999988 99999999998753

>d2mysb_ a.39.1.5 (B:) Myosin Essential Chain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.80  E-value=2.2e-09  Score=86.75  Aligned_cols=65  Identities=18%  Similarity=0.267  Sum_probs=59.9

Q ss_pred             hhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhh
Q 014171          271 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH  336 (429)
Q Consensus       271 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~  336 (429)
                      ..+.++|+.+|.+++|+|+..||..+|+. +|..+++++++.+++.+|.|++|.|+|.+|+.++..
T Consensus        77 ~~l~~aF~~fD~~~~g~I~~~el~~~l~~-~g~~ls~~e~~~~~~~~d~d~dg~I~y~eF~~~l~~  141 (145)
T d2mysb_          77 DVIMGAFKVLDPDGKGSIKKSFLEELLTT-GGGRFTPEEIKNMWAAFPPDVAGNVDYKNICYVITH  141 (145)
T ss_pred             HHHHHHHHhhhhcccchhhHHHHHHHHHH-cCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHhcc
Confidence            45788899999999999999999999955 899999999999999999999999999999987753

>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Pob1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=6.5e-10  Score=84.88  Aligned_cols=72  Identities=22%  Similarity=0.267  Sum_probs=62.6

Q ss_pred             ccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhh
Q 014171          264 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVH  338 (429)
Q Consensus       264 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~  338 (429)
                      .+++++.+.+.++|+.+|+|++|+|+.+|+..+|.+ .|  .+..++..+++.+|.|++|.|+++||+.++..+.
T Consensus        15 ~lt~ee~~~y~~lF~~~D~d~~G~Is~~e~~~~l~~-s~--L~~~~L~~Iw~l~D~d~dG~l~~~EF~~am~Li~   86 (110)
T d1iq3a_          15 RITEEQREYYVNQFRSLQPDPSSFISGSVAKNFFTK-SK--LSIPELSYIWELSDADCDGALTLPEFCAAFHLIV   86 (110)
T ss_dssp             CCSSSSHHHHHHHHHHHCCSSSSEEEHHHHHHHCCS-SS--CSSCCHHHHHHHHCSSSCSEEEHHHHHHHHHHHH
T ss_pred             ccCHHHHHHHHHHHHHhCCCcccchhHHHHHHHHHh-hc--cchHHHHHHHHHhccCCCCeECHHHHHHHHHHHH
Confidence            357788899999999999999999999999999944 34  5667899999999999999999999998776553

>d1k8ua_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100a6 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a6 [TaxId: 9606]

Probab=98.78  E-value=1.5e-09  Score=79.11  Aligned_cols=63  Identities=24%  Similarity=0.365  Sum_probs=53.7

Q ss_pred             HHHHHHHhccc-cCCCCC-ccCHHHHHhhhcCC---C------CHHHHHHHhCCCCCCcccHHHHHHHHHhccc
Q 014171          349 HLRSQAAFEKF-DIDRDG-FITPEELRMHTGLK---G------SIDPLLEEADIDKDGRISLSEFRRLLRTASI  411 (429)
Q Consensus       349 ~~~l~~~F~~~-D~~~~G-~I~~~el~~~~~~~---~------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~~  411 (429)
                      ...+..+|..| |+|++| +|+..||+.++...   +      .++++++++|.|+||.|+|+||+.+|.+..+
T Consensus         8 i~~ii~vF~kya~~dg~~~~ls~~Elk~Ll~~e~~~~~~~~~~~~~~~~~~lD~d~Dg~IdF~EF~~l~~~la~   81 (89)
T d1k8ua_           8 IGLLVAIFHKYSGREGDKHTLSKKELKELIQKELTIGSKLQDAEIARLMEDLDRNKDQEVNFQEYVTFLGALAL   81 (89)
T ss_dssp             HHHHHHHHHHHHTSSSCTTEEEHHHHHHHHHHHSCCGGGTTSHHHHHHHHHHHHTTTCEEEHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCCCCCeecHHHHHHHHHHHHHhhccCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHH
Confidence            34678899888 999999 69999999988652   2      2899999999999999999999999987653

>d1iq3a_ a.39.1.6 (A:) Pob1 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Pob1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=4.4e-09  Score=80.18  Aligned_cols=59  Identities=20%  Similarity=0.247  Sum_probs=53.3

Q ss_pred             HHHHHHhccccCCCCCccCHHHHHhhhcCCC----CHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          350 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       350 ~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~----~~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                      ..+.++|+.+|+|++|+|+.+|++.++...+    ++..+++.+|.|++|.|+++||+.+|+=
T Consensus        22 ~~y~~lF~~~D~d~~G~Is~~e~~~~l~~s~L~~~~L~~Iw~l~D~d~dG~l~~~EF~~am~L   84 (110)
T d1iq3a_          22 EYYVNQFRSLQPDPSSFISGSVAKNFFTKSKLSIPELSYIWELSDADCDGALTLPEFCAAFHL   84 (110)
T ss_dssp             HHHHHHHHHHCCSSSSEEEHHHHHHHCCSSSCSSCCHHHHHHHHCSSSCSEEEHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCcccchhHHHHHHHHHhhccchHHHHHHHHHhccCCCCeECHHHHHHHHHH
Confidence            4678899999999999999999999998776    4999999999999999999999977753

>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=98.75  E-value=3e-09  Score=60.70  Aligned_cols=31  Identities=35%  Similarity=0.508  Sum_probs=28.7

Q ss_pred             HHHHHHhccccCCCCCccCHHHHHhhhcCCC
Q 014171          350 LRSQAAFEKFDIDRDGFITPEELRMHTGLKG  380 (429)
Q Consensus       350 ~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~  380 (429)
                      +.+++||+.||+|++|+|+.+||+.+++.+|
T Consensus         3 eel~eAF~~FDkDg~G~Is~~EL~~vm~~lG   33 (33)
T d2hf5a1           3 EEIREAFRVFDKDGNGYISAAELRHVMTNLG   33 (33)
T ss_dssp             HHHHHHHHHHSSSCCSCBCHHHHHHHTTSCC
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHHHcC
Confidence            4689999999999999999999999998875

>d1qv0a_ a.39.1.5 (A:) Calcium-regulated photoprotein {Hydrozoa (Obelia longissima), obelin [TaxId: 32570]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Hydrozoa (Obelia longissima), obelin [TaxId: 32570]

Probab=98.75  E-value=7.5e-09  Score=87.43  Aligned_cols=67  Identities=19%  Similarity=0.168  Sum_probs=56.0

Q ss_pred             HHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhh
Q 014171          269 ELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLH  336 (429)
Q Consensus       269 ~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~  336 (429)
                      ....+..+|..+|.|++|+|+.+||..++.. +|..++++++..+|+.+|.|++|.|+|+||+..+..
T Consensus       105 ~~~~~~~~F~~~D~d~~G~is~~E~~~~l~~-~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~~~~  171 (189)
T d1qv0a_         105 IREWGDAVFDIFDKDGSGTITLDEWKAYGKI-SGISPSQEDCEATFRHCDLDNAGDLDVDEMTRQHLG  171 (189)
T ss_dssp             HHHHHHHHHHHTC----CEECHHHHHHHHHH-HSSCCCHHHHHHHHHHSCCCTTSCEEHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHccCCCCcccchhhHHHHHh-cCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHH
Confidence            3445677899999999999999999999955 899999999999999999999999999999987643

>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.75  E-value=7.4e-09  Score=77.33  Aligned_cols=56  Identities=20%  Similarity=0.270  Sum_probs=51.7

Q ss_pred             HHHHhccccCCCCCccCHHHHHhhhcCCCC----HHHHHHHhCCCCCCcccHHHHHHHHH
Q 014171          352 SQAAFEKFDIDRDGFITPEELRMHTGLKGS----IDPLLEEADIDKDGRISLSEFRRLLR  407 (429)
Q Consensus       352 l~~~F~~~D~~~~G~I~~~el~~~~~~~~~----~~~~~~~~d~~~dg~i~~~ef~~~~~  407 (429)
                      .+++|+.+|+|++|+|+.+|++.++...|-    +..++..+|.|++|.|+++||+.+|+
T Consensus        13 y~~~F~~~D~d~~G~i~~~e~~~~l~~s~L~~~~L~~i~~~~D~d~dG~L~~~EF~~am~   72 (99)
T d1qjta_          13 YEKYYRQVEAGNTGRVLALDAAAFLKKSGLPDLILGKIWDLADTDGKGVLSKQEFFVALR   72 (99)
T ss_dssp             HHHHHHHHCCTTSSCCCSHHHHHHHHTSSSCHHHHHHHHHHHCCSSSSSCCSHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcccHHHHHHHHHHcCCcHHHHHHHHHHHcCCCCCccCHHHHHHHHH
Confidence            567899999999999999999999998873    88899999999999999999998886

>d1lkja_ a.39.1.5 (A:) Calmodulin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calmodulin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.73  E-value=2.7e-08  Score=80.21  Aligned_cols=60  Identities=25%  Similarity=0.504  Sum_probs=32.7

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHH
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAA  333 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~  333 (429)
                      .+..+|+.+|.+++|+|+.+||..++.. +|...++.+++.+++.+| |++|+|+|+||+.+
T Consensus        84 ~~~~aF~~~D~d~~G~I~~~el~~~l~~-~g~~~~~~~~~~~~~~~d-d~dG~I~~~eF~~~  143 (146)
T d1lkja_          84 ELLEAFKVFDKNGDGLISAAELKHVLTS-IGEKLTDAEVDDMLREVS-DGSGEINIQQFAAL  143 (146)
T ss_dssp             HHHHHHHHHCSSSSCEEEHHHHHHHHHH-HTCSCCHHHHHHHHHHHC-CSSSEEEHHHHHHH
T ss_pred             HHHHHHHHhCCCCCCcCcHHHHHHHHHH-cCCcccHHHHHHHHHhcc-CCCCeEeHHHHHHH
Confidence            4455555555555555555555555532 455555555555555555 55555555555543

>d1psra_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), psoriasin s100a7 [TaxId: 9606]

Probab=98.73  E-value=1.5e-09  Score=81.33  Aligned_cols=71  Identities=18%  Similarity=0.353  Sum_probs=57.4

Q ss_pred             chHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCC------CccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhh
Q 014171          266 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPW------KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV  337 (429)
Q Consensus       266 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~------~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~  337 (429)
                      .+..+..+.++|+.+| +++|.|+..||..+|...++.      ..+...++++|+.+|.|+||.|+|+||+.++..+
T Consensus         5 ~E~~i~~l~~~F~~y~-~~dG~i~~~El~~ll~~~~~~~~~~~~~~~~~~v~~~~~~~D~n~DG~I~F~EF~~li~~l   81 (100)
T d1psra_           5 AERSIIGMIDMFHKYT-RRDDKIDKPSLLTMMKENFPNFLSACDKKGTNYLADVFEKKDKNEDKKIDFSEFLSLLGDI   81 (100)
T ss_dssp             HHHHHHHHHHHHHHTC-CTTSCBCHHHHHHHHHHHCHHHHHHHHHTTCCGGGTHHHHHCTTCSSCBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHc-CCCCcccHHHHHHHHHHHccccccccccCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence            3556778889999997 788999999999999764432      1233468999999999999999999999877544

>d1uhka1 a.39.1.5 (A:3-189) Calcium-regulated photoprotein {Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-regulated photoprotein
species: Jellyfish (Aequorea aequorea), aequorin [TaxId: 168712]

Probab=98.73  E-value=1.1e-08  Score=86.22  Aligned_cols=69  Identities=22%  Similarity=0.232  Sum_probs=61.0

Q ss_pred             chHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q 014171          266 DDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATL  335 (429)
Q Consensus       266 ~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~  335 (429)
                      .......+..+|+.+|.|++|+|+.+||..+|.. +|...+++++..+|+.+|.|++|.|+|+||+..+.
T Consensus       100 ~~~~~~~~~~~F~~~D~d~~G~Is~~El~~~l~~-~g~~~~~~~~~~lf~~~D~d~dG~Is~~EF~~~~~  168 (187)
T d1uhka1         100 PTLIRIWGDALFDIVDKDQNGAITLDEWKAYTKA-AGIIQSSEDCEETFRVCDIDESGQLDVDEMTRQHL  168 (187)
T ss_dssp             CCHHHHHHHHHHHHHCTTCSSEECHHHHHHHHHH-HTSCCSHHHHHHHHHHSCCCTTSCEEHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHccCCCcccchHHHHHHHHH-hCCCccHHHHHHHHHHhCCCCCCCEeHHHHHHHHH
Confidence            3344456788999999999999999999999954 88889999999999999999999999999987554

>d1snla_ a.39.1.7 (A:) Nucleobindin 1 (CALNUC) {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Nucleobindin 1 (CALNUC)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=3.4e-09  Score=79.49  Aligned_cols=62  Identities=24%  Similarity=0.373  Sum_probs=49.8

Q ss_pred             hhccccccCCCCCCcccHHHHHHHHHhhC---CC------------CccHHHHHHHHHHhcCCCCCcccHHHHHHHH
Q 014171          273 LRDQFDAIDVDKNGSISLEEMRQALAKDL---PW------------KLKESRVLEILQAIDCNTDGLVDFSEFVAAT  334 (429)
Q Consensus       273 l~~~F~~~D~~~~G~i~~~el~~~l~~~~---~~------------~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~  334 (429)
                      ++.+|..+|.|++|+|+.+||..++....   ..            ......+..+|..+|.|+||.||++||+.++
T Consensus        18 ~r~~F~~~D~DgdG~i~~~El~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~D~d~DG~Is~~EF~~~~   94 (99)
T d1snla_          18 PKTFFILHDINSDGVLDEQELEALFTKELEKVYDPKNEEDDMREMEEERLRMREHVMKNVDTNQDRLVTLEEFLAST   94 (99)
T ss_dssp             HHHHHHHHCSSCCSEEEHHHHHHHHHHHHHTTSCCSSCSSHHHHTTHHHHHHHHHHHHHTCSSCSSEEEHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCcCCHHHHHHHHHHHHHhcchhhhhhhhhhhhHHHHHHHHHHHHHHcCCCCCCcCcHHHHHHHH
Confidence            56789999999999999999999985421   10            1123357889999999999999999999765

>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]

Probab=98.70  E-value=1.5e-08  Score=73.20  Aligned_cols=71  Identities=28%  Similarity=0.389  Sum_probs=57.6

Q ss_pred             hHHHhhhhcccccc-CCCCCC-cccHHHHHHHHHhhCC----CCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhh
Q 014171          267 DEELADLRDQFDAI-DVDKNG-SISLEEMRQALAKDLP----WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV  337 (429)
Q Consensus       267 ~~~~~~l~~~F~~~-D~~~~G-~i~~~el~~~l~~~~~----~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~  337 (429)
                      +..+..+..+|+++ +.+|++ +|+.+||+.++...++    ...+...++++++.+|.|+||.|+|.||+..+..+
T Consensus         4 E~ai~~li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~n~Dg~idF~EF~~li~~l   80 (87)
T d1e8aa_           4 EEHLEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAIA   80 (87)
T ss_dssp             HHHHHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHH
Confidence            34567888999988 556654 7999999999977544    34467889999999999999999999999876543

>d1e8aa_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), calgranulin C, s100a12 [TaxId: 9606]

Probab=98.70  E-value=9.4e-09  Score=74.27  Aligned_cols=62  Identities=18%  Similarity=0.201  Sum_probs=51.3

Q ss_pred             HHHHHHHhccc-cCCCCC-ccCHHHHHhhhcCCC-----------CHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          349 HLRSQAAFEKF-DIDRDG-FITPEELRMHTGLKG-----------SIDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       349 ~~~l~~~F~~~-D~~~~G-~I~~~el~~~~~~~~-----------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      ...+..+|..| ++++++ +|+++||+++++...           .++++++.+|.|+||.|+|+||+.++.+..
T Consensus         7 i~~li~vF~kya~~~g~~~~Lsk~Elk~ll~~e~~~~~~~~~~~~~v~~~~~~lD~n~Dg~idF~EF~~li~~l~   81 (87)
T d1e8aa_           7 LEGIVNIFHQYSVRKGHFDTLSKGELKQLLTKELANTIKNIKDKAVIDEIFQGLDANQDEQVDFQEFISLVAIAL   81 (87)
T ss_dssp             HHHHHHHHHHHHTSSSSTTEECHHHHHHHHHHHSTTTSTTTTSHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCCCCCeEcHHHHHHHHHHHccccccCCCCHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHHH
Confidence            35678899888 556654 699999999986421           289999999999999999999999998754

>d1w7jb1 a.39.1.5 (B:11-149) Myosin Essential Chain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Essential Chain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=6.1e-09  Score=83.34  Aligned_cols=66  Identities=23%  Similarity=0.424  Sum_probs=55.8

Q ss_pred             hHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHH
Q 014171          267 DEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAAT  334 (429)
Q Consensus       267 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~  334 (429)
                      .....++.++|+.+|.+++|+|+.+||..+|+. +|..+++.+++.++.. |.|++|.|+|.||+..+
T Consensus        73 ~~~~~~l~~aF~~~D~d~~G~I~~~el~~~l~~-~g~~~~~~e~~~l~~~-~~d~dg~I~~~eF~~~l  138 (139)
T d1w7jb1          73 QGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTT-LGEKMTEEEVETVLAG-HEDSNGCINYEAFLKHI  138 (139)
T ss_dssp             -----CCHHHHHTTCTTSSSEEEHHHHHHHHHH-SSSCCCHHHHHHHHTT-CCCTTSEEEHHHHHHHT
T ss_pred             ccHHHHHHHhhhhccCCCCCeEeHHHHHHHHHH-hCCCCCHHHHHHHHhh-CCCCCCeEeHHHHHHHh
Confidence            344466889999999999999999999999955 8999999999999875 88999999999999754

>d1s6ia_ a.39.1.5 (A:) Calcium-dependent protein kinase sk5 CLD {Soybean (Glycine max) [TaxId: 3847]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium-dependent protein kinase sk5 CLD
species: Soybean (Glycine max) [TaxId: 3847]

Probab=98.69  E-value=1.8e-08  Score=84.56  Aligned_cols=96  Identities=21%  Similarity=0.251  Sum_probs=78.7

Q ss_pred             HHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC------CH
Q 014171          309 RVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG------SI  382 (429)
Q Consensus       309 ~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~------~~  382 (429)
                      +++++|..+|.|++|.|+++||..++.....-   ..   ...+..+|+.+|.+++|.|+.+++..+.....      .+
T Consensus        11 ~l~~~F~~~D~d~dG~Is~~e~~~~l~~l~~~---~~---~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~~~~~~~~e~l   84 (182)
T d1s6ia_          11 GLKELFKMIDTDNSGTITFDELKDGLKRVGSE---LM---ESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENL   84 (182)
T ss_dssp             SHHHHHHTTSSSSSSCEEHHHHHHHHTTTTCC---CC---HHHHHHHHHHTCTTCSSEECHHHHHHHHTTSSSSCCCCST
T ss_pred             HHHHHHHHHcCCCcCCCCHHHHHHHHHHcCCc---cc---cccchhhhhhhhccccccchHHHHHHHHHhhcccccHHHH
Confidence            57889999999999999999999877554221   11   23577899999999999999999987655443      37


Q ss_pred             HHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          383 DPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       383 ~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      ..+|..+|.+++|.|+.+||..+++...
T Consensus        85 ~~aF~~~D~d~~G~i~~~el~~~l~~~g  112 (182)
T d1s6ia_          85 VSAFSYFDKDGSGYITLDEIQQACKDFG  112 (182)
T ss_dssp             HHHHHHTTTTCSSEEEHHHHHHTTTTTT
T ss_pred             HHHHHHHhhcCCCccchhhhhhhhhhcC
Confidence            8899999999999999999998887544

>d2jxca1 a.39.1.6 (A:121-215) Eps15 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=1.6e-08  Score=74.85  Aligned_cols=57  Identities=21%  Similarity=0.346  Sum_probs=51.2

Q ss_pred             HHHHHHhccccCCCCCccCHHHHHhhhcCCCC----HHHHHHHhCCCCCCcccHHHHHHHHH
Q 014171          350 LRSQAAFEKFDIDRDGFITPEELRMHTGLKGS----IDPLLEEADIDKDGRISLSEFRRLLR  407 (429)
Q Consensus       350 ~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~----~~~~~~~~d~~~dg~i~~~ef~~~~~  407 (429)
                      ..++++|+.+| +++|+|+.+|++.++...|-    +..++..+|.|+||.|+++||+.+|.
T Consensus        10 ~~y~~~F~~~D-~~~G~i~~~el~~~l~~~gl~~~~L~~Iw~~~D~~~dG~l~~~EF~~a~~   70 (95)
T d2jxca1          10 AKYDAIFDSLS-PVNGFLSGDKVKPVLLNSKLPVDILGRVWELSDIDHDGMLDRDEFAVAMF   70 (95)
T ss_dssp             HHHHHHHHHTC-CBTTEEEHHHHHHHHTTSSCCHHHHHHHHHHHCTTCSSEEEHHHHHHHHH
T ss_pred             HHHHHHHHHhC-CCCCceeHHHHHHHHHHcCCCHHHHHHHHHHhcCCCCCeEcHHHHHHHHH
Confidence            45788999999 89999999999999998873    88999999999999999999976554

>d2scpa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Sandworm (Nereis diversicolor) [TaxId: 126592]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Sandworm (Nereis diversicolor) [TaxId: 126592]

Probab=98.66  E-value=4.1e-08  Score=81.51  Aligned_cols=104  Identities=12%  Similarity=0.135  Sum_probs=75.2

Q ss_pred             HHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcccc---cHHHHHHHHHHhcc--ccCCCCCccCHHHHHhhhcCCC-
Q 014171          307 ESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEEHD---SEKWHLRSQAAFEK--FDIDRDGFITPEELRMHTGLKG-  380 (429)
Q Consensus       307 ~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~~~---~~~~~~~l~~~F~~--~D~~~~G~I~~~el~~~~~~~~-  380 (429)
                      ..+++.+|+.+|.|++|.|+++||..++..........   ...........|..  .|.+++|.|+.+|+...+.... 
T Consensus         5 ~~~l~~~F~~~D~d~dG~Is~~Ef~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~   84 (174)
T d2scpa_           5 VQKMKTYFNRIDFDKDGAITRMDFESMAERFAKESEMKAEHAKVLMDSLTGVWDNFLTAVAGGKGIDETTFINSMKEMVK   84 (174)
T ss_dssp             HHHHHHHHHHHCTTCSSEECHHHHHHHHHHHHHHSCCCTTHHHHHHHHHHHHHHHTGGGTTTTSCEEHHHHHHHHHHHTS
T ss_pred             HHHHHHHHHHHccCCCCcEeHHHHHHHHHHHhccccchhHHHHHhHHhhhhhccccccccCCCCcCcHHHHHHHHHhhhc
Confidence            46789999999999999999999988765443222111   11112223333443  3778899999999987664332 


Q ss_pred             ----------CHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          381 ----------SIDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       381 ----------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                                .+..+|+.+|.|+||.|+.+||..+++...
T Consensus        85 ~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~l~~~~  124 (174)
T d2scpa_          85 NPEAKSVVEGPLPLFFRAVDTNEDNNISRDEYGIFFGMLG  124 (174)
T ss_dssp             CGGGTHHHHTHHHHHHHHHCTTCSSSEEHHHHHHHHHHTT
T ss_pred             chhhHHHHHHHHHHHHHHHCCCccccCCHHHHHHHHHHHh
Confidence                      167799999999999999999999987654

>d1wdcc_ a.39.1.5 (C:) Myosin Regulatory Chain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Myosin Regulatory Chain
species: Bay scallop (Aequipecten irradians) [TaxId: 31199]

Probab=98.63  E-value=1.1e-07  Score=77.08  Aligned_cols=104  Identities=13%  Similarity=0.115  Sum_probs=65.0

Q ss_pred             ccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCC-CCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcc
Q 014171          264 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLP-WKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE  342 (429)
Q Consensus       264 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~-~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~  342 (429)
                      .+++.++..+    ...|.+++|.|+.+||..++..... ...+..++.+.|+.+|.+++|.|+.+||..++.......+
T Consensus        41 ~~t~~e~~~~----~~~~~~~~~~i~~~eFl~~~~~~~~~~~~~~~~l~~aF~~~D~~~~G~I~~~el~~~l~~~g~~ls  116 (152)
T d1wdcc_          41 NPRNEDVFAV----GGTHKMGEKSLPFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLS  116 (152)
T ss_dssp             CCCHHHHHHT----TCCSSTTSCEECHHHHHHHHHHHTTSCCCCHHHHHHHHHTTCSSSSSEEEHHHHHHHHHHSSSCCC
T ss_pred             CccHhhhhhh----hhhhccccccccccccccccccccccchhHHHhhhhhhhccccccCccchHHHHHHHHHHcCCCCC
Confidence            3445554443    2346677788888888777755433 2345667777888888888888888888776654322111


Q ss_pred             cccHHHHHHHHHHhccccC--CCCCccCHHHHHhhhc
Q 014171          343 HDSEKWHLRSQAAFEKFDI--DRDGFITPEELRMHTG  377 (429)
Q Consensus       343 ~~~~~~~~~l~~~F~~~D~--~~~G~I~~~el~~~~~  377 (429)
                            ...+..+++.+|.  |++|.|+.+||.+.+.
T Consensus       117 ------~~e~~~l~~~~d~~~d~~G~I~y~eF~~~~~  147 (152)
T d1wdcc_         117 ------DEDVDEIIKLTDLQEDLEGNVKYEDFVKKVM  147 (152)
T ss_dssp             ------HHHHHHHHHHHTCCCCTTSEEEHHHHHHHHH
T ss_pred             ------HHHHHHHHHHhccCCCCCCEEEHHHHHHHHh
Confidence                  1235566776664  4457888888876553

>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Sarcoplasmic calcium-binding protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=98.63  E-value=2.5e-08  Score=83.68  Aligned_cols=104  Identities=17%  Similarity=0.223  Sum_probs=76.4

Q ss_pred             HHHHHHHHHH-hcCCCCCcccHHHHHHHHhhhhhhccccc---------HHHHHHHHHHhccccCCCCCccCHHHHHhhh
Q 014171          307 ESRVLEILQA-IDCNTDGLVDFSEFVAATLHVHQLEEHDS---------EKWHLRSQAAFEKFDIDRDGFITPEELRMHT  376 (429)
Q Consensus       307 ~~~~~~l~~~-~d~~~~g~I~~~eF~~~~~~~~~~~~~~~---------~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~  376 (429)
                      ..+++.+|.. +|.|++|.|+++||..++...........         ..........+...|.+++|.|+.+++...+
T Consensus         7 ~~~i~~~F~~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~i~~~~~~~~~   86 (185)
T d2sasa_           7 KQKIKFTFDFFLDMNHDGSIQDNDFEDMMTRYKEVNKGSLSDADYKSMQASLEDEWRDLKGRADINKDDVVSWEEYLAMW   86 (185)
T ss_dssp             HHHHHHHHHHHTCTTCSSEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHHCTTCSSCEEHHHHHHHH
T ss_pred             HHHHHHHHHHhhcCCCCCcCCHHHHHHHHHHhccccCCCcccHHHHHHHHHHHHHHHHHHHHhCcCCCCcEeeeHhhHHH
Confidence            3568899997 59999999999999887755432211100         0011223456788899999999999998765


Q ss_pred             cCCC---------------CHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          377 GLKG---------------SIDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       377 ~~~~---------------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      ....               .+..+|+.+|.|++|.|+.+||..+++...
T Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~~G~Is~~E~~~~l~~~~  135 (185)
T d2sasa_          87 EKTIATCKSVADLPAWCQNRIPFLFKGMDVSGDGIVDLEEFQNYCKNFQ  135 (185)
T ss_dssp             HHHHHTCCSGGGSCTTHHHHHHHHHHHHCTTSSSCCCHHHHHHHTTSSC
T ss_pred             HHHhhhhhhhhhhhHHHHHHHHHHHHHHccCCCccCCHHHHHHHHHHcC
Confidence            3211               177899999999999999999999997644

>d1qjta_ a.39.1.6 (A:) Eps15 {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Eps15 homology domain (EH domain)
domain: Eps15
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.61  E-value=1e-08  Score=76.60  Aligned_cols=66  Identities=17%  Similarity=0.192  Sum_probs=57.3

Q ss_pred             hhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhh
Q 014171          271 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQ  339 (429)
Q Consensus       271 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~  339 (429)
                      ..++++|+.+|.+++|+|+.+|+..++.+ .|  .+..++..+++.+|.|++|.|+++||+.++..+..
T Consensus        11 ~~y~~~F~~~D~d~~G~i~~~e~~~~l~~-s~--L~~~~L~~i~~~~D~d~dG~L~~~EF~~am~Li~~   76 (99)
T d1qjta_          11 PVYEKYYRQVEAGNTGRVLALDAAAFLKK-SG--LPDLILGKIWDLADTDGKGVLSKQEFFVALRLVAC   76 (99)
T ss_dssp             THHHHHHHHHCCTTSSCCCSHHHHHHHHT-SS--SCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHCCCCCCcccHHHHHHHHHH-cC--CcHHHHHHHHHHHcCCCCCccCHHHHHHHHHHHHH
Confidence            34667899999999999999999999954 44  67899999999999999999999999988765543

>d1nyaa_ a.39.1.5 (A:) Calerythrin {Saccharopolyspora erythraea [TaxId: 1836]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calerythrin
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=98.51  E-value=2e-07  Score=77.14  Aligned_cols=104  Identities=16%  Similarity=0.207  Sum_probs=77.1

Q ss_pred             cHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhhcc--cccH-------HHHHHHHHHhccccCCCCCccCHHHHHhhh
Q 014171          306 KESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQLEE--HDSE-------KWHLRSQAAFEKFDIDRDGFITPEELRMHT  376 (429)
Q Consensus       306 ~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~~~--~~~~-------~~~~~l~~~F~~~D~~~~G~I~~~el~~~~  376 (429)
                      +.++++++|+.+|.|++|.|+++||..++........  ....       .........+...|.+++|.|+..++...+
T Consensus         5 ~~~~l~~~F~~~D~d~dG~Is~~Ef~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~   84 (176)
T d1nyaa_           5 ASDRLKKRFDRWDFDGNGALERADFEKEAQHIAEAFGKDAGAAEVQTLKNAFGGLFDYLAKEAGVGSDGSLTEEQFIRVT   84 (176)
T ss_dssp             HHHHHHHHHHHCCSSCCSSBCSHHHHHHHHHHHHHTSSCSSSHHHHHHHHHHHHHHHHHHHHHTSCTTCCBCHHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCCCCcCcHHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHHHHHHHHHhcCCCCCcccHHHHHHHH
Confidence            5678999999999999999999999987755432111  1011       111123456778899999999999987654


Q ss_pred             cCCC--------------CHHHHHHHhCCCCCCcccHHHHHHHHHhc
Q 014171          377 GLKG--------------SIDPLLEEADIDKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       377 ~~~~--------------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~  409 (429)
                      ....              .+..+|..+|.|+||.|+.+||..+++..
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~F~~~D~d~dG~Is~~E~~~~~~~~  131 (176)
T d1nyaa_          85 ENLIFEQGEASFNRVLGPVVKGIVGMCDKNADGQINADEFAAWLTAL  131 (176)
T ss_dssp             HHHHSSSCHHHHHHHHHHHHHHHHHHTCSSCCSEEEHHHHHHHHHHT
T ss_pred             hhhhhhhhhhhhHHHHHHHHHHHHHHHccCCChhhhHHHHHHHHHhc
Confidence            3221              16778899999999999999999998754

>d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Cow (Bos taurus), s100b [TaxId: 9913]

Probab=98.39  E-value=3.8e-07  Score=65.86  Aligned_cols=70  Identities=20%  Similarity=0.395  Sum_probs=55.9

Q ss_pred             HHHhhhhcccccc-CCCCC-CcccHHHHHHHHHhhCCC----CccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhh
Q 014171          268 EELADLRDQFDAI-DVDKN-GSISLEEMRQALAKDLPW----KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV  337 (429)
Q Consensus       268 ~~~~~l~~~F~~~-D~~~~-G~i~~~el~~~l~~~~~~----~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~  337 (429)
                      ..+..+..+|+.+ ..+|+ ++|+..||+..+.+.++.    ......++++++.+|.|+||.|+|+||+..+..+
T Consensus         6 ~ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~~d~~m~~LD~n~Dg~vdF~EF~~li~~l   81 (90)
T d3cr5x1           6 KAVVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMI   81 (90)
T ss_dssp             HHHHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence            3456788889987 45555 589999999999886553    3345679999999999999999999998876544

>d3cr5x1 a.39.1.2 (X:0-89) Calcyclin (S100) {Cow (Bos taurus), s100b [TaxId: 9913]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Cow (Bos taurus), s100b [TaxId: 9913]

Probab=98.37  E-value=4.1e-07  Score=65.64  Aligned_cols=62  Identities=19%  Similarity=0.319  Sum_probs=50.7

Q ss_pred             HHHHHHHhccc-cCCCC-CccCHHHHHhhhcCC-----C------CHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          349 HLRSQAAFEKF-DIDRD-GFITPEELRMHTGLK-----G------SIDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       349 ~~~l~~~F~~~-D~~~~-G~I~~~el~~~~~~~-----~------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      ...+..+|..| .++|+ ++|++.||++++...     +      .++++++.+|.|+||.|+|+||+.++.+..
T Consensus         8 i~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~~d~~m~~LD~n~Dg~vdF~EF~~li~~la   82 (90)
T d3cr5x1           8 VVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMIT   82 (90)
T ss_dssp             HHHHHHHHHHHHTSSSSTTSBCHHHHHHHHHHHCTTTSCCCCSHHHHHHHHHHHCTTSSSSBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhccCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHH
Confidence            34678899988 45554 679999999988752     2      189999999999999999999999987654

>d2zkmx1 a.39.1.7 (X:142-311) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phospholipase C-beta-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.35  E-value=3.2e-08  Score=81.90  Aligned_cols=99  Identities=10%  Similarity=0.030  Sum_probs=68.5

Q ss_pred             HHHHHHHH--hcCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhcCCC---CHH
Q 014171          309 RVLEILQA--IDCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTGLKG---SID  383 (429)
Q Consensus       309 ~~~~l~~~--~d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~---~~~  383 (429)
                      -+++.+..  +|.|++|+|+++|+..++......    .......+...|...|.+++|.|+.+||..++..+.   ++.
T Consensus         6 ~l~k~~~k~~~d~n~dG~Is~~el~k~l~~~~~~----~~~~~~~~~~~~~~~D~~~~~~i~F~eF~~~~~~l~~r~ei~   81 (170)
T d2zkmx1           6 FLDKILVKLKMQLNSEGKIPVKNFFQMFPADRKR----VEAALSACHLPKGKNDAINPEDFPEPVYKSFLMSLCPRPEID   81 (170)
T ss_dssp             HHHHHHHHHHHSCCTTSCEEHHHHHHHSCSCHHH----HHHHHHHTTCCCCTTCEECGGGCCHHHHHHHHHHHSCCHHHH
T ss_pred             HHHHHHHHHhcccCCCCCCcHHHHHHHHHHhhhh----HHHHHHHHhhhhccccccCCCccCHHHHHHHHhccCCHHHHH
Confidence            44555554  799999999999998765332111    011123566779999999999999999998876554   488


Q ss_pred             HHHHHhCCCCCCcccHHHHHHHHHhccc
Q 014171          384 PLLEEADIDKDGRISLSEFRRLLRTASI  411 (429)
Q Consensus       384 ~~~~~~d~~~dg~i~~~ef~~~~~~~~~  411 (429)
                      .+|..+|.|++|.||.+||.++|....-
T Consensus        82 ~~F~~~d~d~~~~it~~el~~fL~~~Q~  109 (170)
T d2zkmx1          82 EIFTSYHAKAKPYMTKEHLTKFINQKQR  109 (170)
T ss_dssp             TTCC--------CCCHHHHHHHHHHTCC
T ss_pred             HHHHHHcCCCCCcccHHHHHHHHHHHhc
Confidence            8899999999999999999999987653

>d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=98.32  E-value=1.2e-07  Score=51.38  Aligned_cols=30  Identities=33%  Similarity=0.386  Sum_probs=26.5

Q ss_pred             HHHHHHHhccccCCCCCccCHHHHHhhhcC
Q 014171          349 HLRSQAAFEKFDIDRDGFITPEELRMHTGL  378 (429)
Q Consensus       349 ~~~l~~~F~~~D~~~~G~I~~~el~~~~~~  378 (429)
                      +++|.++|++||+|.||+|+++||..+++.
T Consensus         3 EeELae~FRifDkNaDGyiD~eEl~~ilr~   32 (34)
T d1ctda_           3 EEELANAFRIFDKNADGYIDIEELGEILRA   32 (34)
T ss_dssp             HHHHHHHHHTTCCSSSSCBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHccCCcccccHHHHHHHHHh
Confidence            356888999999999999999999988764

>d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]

Probab=98.30  E-value=6.7e-07  Score=65.10  Aligned_cols=62  Identities=23%  Similarity=0.352  Sum_probs=51.0

Q ss_pred             HHHHHHHhcccc-CCCC-CccCHHHHHhhhcCCC-----------CHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          349 HLRSQAAFEKFD-IDRD-GFITPEELRMHTGLKG-----------SIDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       349 ~~~l~~~F~~~D-~~~~-G~I~~~el~~~~~~~~-----------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      ...+..+|..|. ++|+ ++|++.||+.++...-           .++++++.+|.|+||.|+|+||+.++.+..
T Consensus         8 i~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~li~~la   82 (95)
T d1qlsa_           8 IESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGLA   82 (95)
T ss_dssp             HHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCcCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHHH
Confidence            356788898874 4554 7899999999987631           289999999999999999999999987654

>d1ij5a_ a.39.1.9 (A:) Cbp40 (plasmodial specific CaII-binding protein LAV1-2) {Physarum polycephalum [TaxId: 5791]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
domain: Cbp40 (plasmodial specific CaII-binding protein LAV1-2)
species: Physarum polycephalum [TaxId: 5791]

Probab=98.25  E-value=1.2e-06  Score=79.65  Aligned_cols=102  Identities=23%  Similarity=0.295  Sum_probs=74.6

Q ss_pred             HhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHH-----------------------------HHHHHHHHhcCC
Q 014171          270 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKES-----------------------------RVLEILQAIDCN  320 (429)
Q Consensus       270 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~-----------------------------~~~~l~~~~d~~  320 (429)
                      ...+...|..+|.+++|.++..++..++.. .+......                             .+..+|..+|.|
T Consensus       187 ~~~~~~~F~~~d~d~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~ef~~~~~~~~~~~~~F~~~D~d  265 (321)
T d1ij5a_         187 LAALVADFRKIDTNSNGTLSRKEFREHFVR-LGFDKKSVQDALFRYADEDESDDVGFSEYVHLGLCLLVLRILYAFADFD  265 (321)
T ss_dssp             HHTSCCCHHHHCTTCCSEECHHHHHHHHHH-TTCCCHHHHHHHHHHHCTTCSSCEEHHHHHHHHHHHHHHHHHHHHTCSS
T ss_pred             hhhhhHHHHHHhhcccccchhHHHhhhhhc-ccccchHHHHHHHHhhhcccccccccccccchhhhhhHHHHHHHHHhcC
Confidence            345677888899999999999999888855 44433221                             112357788999


Q ss_pred             CCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhhc
Q 014171          321 TDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHTG  377 (429)
Q Consensus       321 ~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~~  377 (429)
                      ++|.|+..||..++..........     ..+..+|+.+|.|++|+|+.+||.+++-
T Consensus       266 ~~G~Is~~E~~~~l~~~~~~~~~~-----~~~~~l~~~~D~d~dG~Is~~EF~~~ml  317 (321)
T d1ij5a_         266 KSGQLSKEEVQKVLEDAHIPESAR-----KKFEHQFSVVDVDDSKSLSYQEFVMLVL  317 (321)
T ss_dssp             SCSSEEHHHHHHHHHHTTCCGGGC-----STHHHHHHHHTTTTCSEECHHHHHHHHH
T ss_pred             CCCCCcHHHHHHHHHHcCCCcCcH-----HHHHHHHHHhCCCCCCcCcHHHHHHHHH
Confidence            999999999988776543211111     2366789999999999999999998764

>d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Diacylglycerol kinase alpha, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=1.6e-06  Score=66.22  Aligned_cols=81  Identities=14%  Similarity=0.150  Sum_probs=65.8

Q ss_pred             ccchHHHhhhhccccccCC---CCCCcccHHHHHHHHHhhCCCCc-cHHHHHHHHHHhcCCCC--------CcccHHHHH
Q 014171          264 TLDDEELADLRDQFDAIDV---DKNGSISLEEMRQALAKDLPWKL-KESRVLEILQAIDCNTD--------GLVDFSEFV  331 (429)
Q Consensus       264 ~~~~~~~~~l~~~F~~~D~---~~~G~i~~~el~~~l~~~~~~~~-~~~~~~~l~~~~d~~~~--------g~I~~~eF~  331 (429)
                      .+++.+++.+++.|+....   ..+|.|+.++|+.++...++... ++.-++++|..+|.+++        |.|+|.||+
T Consensus        21 ~fs~~ei~~l~~~Fk~~~~~~~~p~g~i~~~~F~~~~~~~f~~~~~~~~l~~rlF~~FD~~~d~~~~~~~~g~I~f~efv  100 (118)
T d1tuza_          21 EYSTKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVPRHLSLALFQSFETGHCLNETNVTKDVVCLNDVS  100 (118)
T ss_dssp             HHCCCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCCHHHHHHHHHHSCCCCCTTCCCCCSCCEEHHHHH
T ss_pred             CCCHHHHHHHHHHHhccccccCCcccccCHHHHHHHHHHhCCCCCchHHHHHHHHHHHccccccccccCCCceeeHHHHH
Confidence            4578888899999975532   46799999999999987777653 46788999999999976        889999999


Q ss_pred             HHHhhhhhhcccc
Q 014171          332 AATLHVHQLEEHD  344 (429)
Q Consensus       332 ~~~~~~~~~~~~~  344 (429)
                      ..++.+.....++
T Consensus       101 ~~LS~l~~G~~ee  113 (118)
T d1tuza_         101 CYFSLLEGGRPED  113 (118)
T ss_dssp             HHHHHHHSCCCSC
T ss_pred             HHHHHHcCCCHHH
Confidence            9998877665544

>d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100p [TaxId: 9606]

Probab=98.12  E-value=1.7e-06  Score=62.79  Aligned_cols=70  Identities=26%  Similarity=0.438  Sum_probs=54.5

Q ss_pred             HHHhhhhccccccC-CCCC-CcccHHHHHHHHHhhCCCCc----cHHHHHHHHHHhcCCCCCcccHHHHHHHHhhh
Q 014171          268 EELADLRDQFDAID-VDKN-GSISLEEMRQALAKDLPWKL----KESRVLEILQAIDCNTDGLVDFSEFVAATLHV  337 (429)
Q Consensus       268 ~~~~~l~~~F~~~D-~~~~-G~i~~~el~~~l~~~~~~~~----~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~  337 (429)
                      .-+..+..+|..+. .+|+ ++++..||+..+.+.++.-.    ....++++++.+|.|+||.|+|+||+..+..+
T Consensus         6 ~ai~~ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~l   81 (94)
T d1j55a_           6 TAMGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAAI   81 (94)
T ss_dssp             HHHHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcccCCCcccCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence            34567888898874 4444 58999999999988776332    24579999999999999999999999876544

>d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]

Probab=98.11  E-value=2.9e-06  Score=59.97  Aligned_cols=60  Identities=17%  Similarity=0.299  Sum_probs=48.6

Q ss_pred             HHHHHHHhccccC-CC-CCccCHHHHHhhhcCC--------C-C---HHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          349 HLRSQAAFEKFDI-DR-DGFITPEELRMHTGLK--------G-S---IDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       349 ~~~l~~~F~~~D~-~~-~G~I~~~el~~~~~~~--------~-~---~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                      ...+..+|..|.. +| .+++++.||+.++...        . +   ++++++.+|.|+||.|+|.||+.++.+
T Consensus         9 i~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~   82 (83)
T d1xk4c1           9 IETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMAR   82 (83)
T ss_dssp             HHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhCcCCCcccCCHHHHHHHHHHHhHHHhcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHhh
Confidence            3467889988853 43 4799999999987642        1 2   789999999999999999999999864

>d1qlsa_ a.39.1.2 (A:) Calcyclin (S100) {Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Pig (Sus scrofa), calgizzarin s100c (s100a11) [TaxId: 9823]

Probab=98.11  E-value=1.1e-06  Score=63.87  Aligned_cols=70  Identities=21%  Similarity=0.288  Sum_probs=54.6

Q ss_pred             HHHhhhhccccccC-CCCC-CcccHHHHHHHHHhhCCC----CccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhh
Q 014171          268 EELADLRDQFDAID-VDKN-GSISLEEMRQALAKDLPW----KLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV  337 (429)
Q Consensus       268 ~~~~~l~~~F~~~D-~~~~-G~i~~~el~~~l~~~~~~----~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~  337 (429)
                      ..+..+..+|..+. .+|+ ++|+..||+..+.+.++.    ......++++++.+|.|+||.|+|+||+..+..+
T Consensus         6 ~ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~li~~l   81 (95)
T d1qlsa_           6 RCIESLIAIFQKHAGRDGNNTKISKTEFLIFMNTELAAFTQNQKDPGVLDRMMKKLDLDSDGQLDFQEFLNLIGGL   81 (95)
T ss_dssp             HHHHHHHHHHHHHHTTSSCTTCBCHHHHHHHHTTTSHHHHHHCCCTHHHHHHHHHHCTTCSSSBCHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhCcCCCcCcCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHHHH
Confidence            34567888898874 4555 689999999999664442    2344679999999999999999999999876654

>d1j55a_ a.39.1.2 (A:) Calcyclin (S100) {Human (Homo sapiens), s100p [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100p [TaxId: 9606]

Probab=98.10  E-value=2.3e-06  Score=62.06  Aligned_cols=62  Identities=19%  Similarity=0.313  Sum_probs=49.8

Q ss_pred             HHHHHHHhcccc-CCCC-CccCHHHHHhhhcC-----CC------CHHHHHHHhCCCCCCcccHHHHHHHHHhcc
Q 014171          349 HLRSQAAFEKFD-IDRD-GFITPEELRMHTGL-----KG------SIDPLLEEADIDKDGRISLSEFRRLLRTAS  410 (429)
Q Consensus       349 ~~~l~~~F~~~D-~~~~-G~I~~~el~~~~~~-----~~------~~~~~~~~~d~~~dg~i~~~ef~~~~~~~~  410 (429)
                      ...+..+|..|. ++|+ ++++++||+.++..     .+      .++++++.+|.|+||.|+|+||+.++.+..
T Consensus         8 i~~ii~vFhkYa~~~g~~~tLsk~Elk~Ll~~El~~~l~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~~la   82 (94)
T d1j55a_           8 MGMIIDVFSRYSGSEGSTQTLTKGELKVLMEKELPGFLQSGKDKDAVDKLLKDLDANGDAQVDFSEFIVFVAAIT   82 (94)
T ss_dssp             HHHHHHHHHHHTTSSSCTTEECHHHHHHHHHHHSTTCC------CHHHHHHHHHCSSSSSSEEHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHcccCCCcccCCHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHH
Confidence            346788898884 4443 58999999998864     11      299999999999999999999999987643

>d1xk4c1 a.39.1.2 (C:4-86) Calcyclin (S100) {Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: S100 proteins
domain: Calcyclin (S100)
species: Human (Homo sapiens), s100a9 (mrp14) [TaxId: 9606]

Probab=98.07  E-value=2.3e-06  Score=60.49  Aligned_cols=67  Identities=21%  Similarity=0.356  Sum_probs=52.9

Q ss_pred             HHhhhhccccccC-CCC-CCcccHHHHHHHHHhhCCCCc-----cHHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q 014171          269 ELADLRDQFDAID-VDK-NGSISLEEMRQALAKDLPWKL-----KESRVLEILQAIDCNTDGLVDFSEFVAATL  335 (429)
Q Consensus       269 ~~~~l~~~F~~~D-~~~-~G~i~~~el~~~l~~~~~~~~-----~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~  335 (429)
                      -+..+..+|+.+. .+| .++++..||+..+.+.++.-.     ....++++++.+|.|+||.|+|+||+..+.
T Consensus         8 ai~~ii~vFhkYa~~~G~~~tLsk~Elk~Ll~~El~~~l~~~~~d~~~vd~~m~~LD~n~Dg~vdF~EF~~li~   81 (83)
T d1xk4c1           8 NIETIINTFHQYSVKLGHPDTLNQGEFKELVRKDLQNFLKKENKNEKVIEHIMEDLDTNADKQLSFEEFIMLMA   81 (83)
T ss_dssp             HHHHHHHHHHHHHTTSSSTTSBCHHHHHHHHHHHTTTTTTTGGGCHHHHHHHHHHHCTTCSSSBCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCcCCCcccCCHHHHHHHHHHHhHHHhcCCCCCHHHHHHHHHHhcCCCCCcCcHHHHHHHHh
Confidence            3456778898885 344 369999999999988776422     234589999999999999999999997654

>d2hf5a1 a.39.1.5 (A:81-113) Troponin C {Human (Homo sapiens), cardiac isoform [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Human (Homo sapiens), cardiac isoform [TaxId: 9606]

Probab=98.07  E-value=4.6e-07  Score=51.42  Aligned_cols=31  Identities=35%  Similarity=0.656  Sum_probs=26.9

Q ss_pred             hhhhccccccCCCCCCcccHHHHHHHHHhhCC
Q 014171          271 ADLRDQFDAIDVDKNGSISLEEMRQALAKDLP  302 (429)
Q Consensus       271 ~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~  302 (429)
                      ++++++|+.||+|++|+|+..||..+|. .+|
T Consensus         3 eel~eAF~~FDkDg~G~Is~~EL~~vm~-~lG   33 (33)
T d2hf5a1           3 EEIREAFRVFDKDGNGYISAAELRHVMT-NLG   33 (33)
T ss_dssp             HHHHHHHHHHSSSCCSCBCHHHHHHHTT-SCC
T ss_pred             HHHHHHHHHhCCCCCCcCcHHHHHHHHH-HcC
Confidence            4688999999999999999999999983 354

>d1ctda_ a.39.1.5 (A:) Troponin C {Chicken (Gallus gallus) [TaxId: 9031]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Troponin C
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=97.82  E-value=3.3e-06  Score=45.69  Aligned_cols=28  Identities=29%  Similarity=0.564  Sum_probs=25.1

Q ss_pred             hhhhccccccCCCCCCcccHHHHHHHHH
Q 014171          271 ADLRDQFDAIDVDKNGSISLEEMRQALA  298 (429)
Q Consensus       271 ~~l~~~F~~~D~~~~G~i~~~el~~~l~  298 (429)
                      ++|.++|+.||+|+||+|+.+||..++.
T Consensus         4 eELae~FRifDkNaDGyiD~eEl~~ilr   31 (34)
T d1ctda_           4 EELANAFRIFDKNADGYIDIEELGEILR   31 (34)
T ss_dssp             HHHHHHHHTTCCSSSSCBCHHHHHHHHH
T ss_pred             HHHHHHHHHHccCCcccccHHHHHHHHH
Confidence            4677889999999999999999999884

>d1tuza_ a.39.1.7 (A:) Diacylglycerol kinase alpha, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Diacylglycerol kinase alpha, N-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=0.00011  Score=55.77  Aligned_cols=97  Identities=13%  Similarity=0.135  Sum_probs=64.2

Q ss_pred             CCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhc------CCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHh
Q 014171          283 DKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID------CNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAF  356 (429)
Q Consensus       283 ~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d------~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F  356 (429)
                      +..+.|+.+++.+.....   .++..+|+.+++.|.      ...+|.|++++|..++..........    ..-...+|
T Consensus         3 ~~~s~l~p~~l~~L~~~T---~fs~~ei~~l~~~Fk~~~~~~~~p~g~i~~~~F~~~~~~~f~~~~~~----~~l~~rlF   75 (118)
T d1tuza_           3 KERGLISPSDFAQLQKYM---EYSTKKVSDVLKLFEDGEMAKYVQGDAIGYEGFQQFLKIYLEVDNVP----RHLSLALF   75 (118)
T ss_dssp             CCCSCSCHHHHHHHHHHH---HHCCCCHHHHHHHHHTSGGGGGEETTEECHHHHHHHHHHHTTCSSCC----HHHHHHHH
T ss_pred             cccCCCCHHHHHHHHHHc---CCCHHHHHHHHHHHhccccccCCcccccCHHHHHHHHHHhCCCCCch----HHHHHHHH
Confidence            356789999998876442   356677888888873      23589999999987665432221111    12466789


Q ss_pred             ccccCCCCCccCHHHHHhhhcCCCCHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          357 EKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       357 ~~~D~~~~G~I~~~el~~~~~~~~~~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                      +.||+|+++.++                      ..++|.|+|.||+..|--
T Consensus        76 ~~FD~~~d~~~~----------------------~~~~g~I~f~efv~~LS~  105 (118)
T d1tuza_          76 QSFETGHCLNET----------------------NVTKDVVCLNDVSCYFSL  105 (118)
T ss_dssp             HHSCCCCCTTCC----------------------CCCSCCEEHHHHHHHHHH
T ss_pred             HHHccccccccc----------------------cCCCceeeHHHHHHHHHH
Confidence            999988774433                      235677888887766643

>d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Osteonectin
domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=7e-05  Score=58.57  Aligned_cols=54  Identities=24%  Similarity=0.368  Sum_probs=46.7

Q ss_pred             HhccccCC-CCCccCHHHHHhhhcCCC----CHHHHHHHhCCCCCCcccHHHHHHHHHh
Q 014171          355 AFEKFDID-RDGFITPEELRMHTGLKG----SIDPLLEEADIDKDGRISLSEFRRLLRT  408 (429)
Q Consensus       355 ~F~~~D~~-~~G~I~~~el~~~~~~~~----~~~~~~~~~d~~~dg~i~~~ef~~~~~~  408 (429)
                      -|..+|.| +||.|+..||+.+...+-    -+..++...|.|+||.||+.||...+.-
T Consensus        82 ~F~~LD~n~~D~~L~~~EL~~l~~~L~~~e~C~~~F~~~CD~n~D~~Is~~EW~~Cf~v  140 (151)
T d1sraa_          82 QFGQLDQHPIDGYLSHTELAPLRAPLIPMEHCTTRFFETCDLDNDKYIALDEWAGCFGI  140 (151)
T ss_dssp             HHHHHCCTTCSSEECTTTTGGGGSTTSTTGGGHHHHHHHHCTTCSSSEEHHHHHHHTTC
T ss_pred             ehhhcCCCCCCCccCHHHHHHHHHhhcCCchHHHHHHHHhcCCCCCcCCHHHHHHHcCC
Confidence            59999999 599999999998765332    2889999999999999999999998763

>d1sraa_ a.39.1.3 (A:) C-terminal (EC) domain of BM-40/SPARC/osteonectin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Osteonectin
domain: C-terminal (EC) domain of BM-40/SPARC/osteonectin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.73  E-value=0.00087  Score=52.19  Aligned_cols=56  Identities=20%  Similarity=0.280  Sum_probs=44.8

Q ss_pred             cccccCCC-CCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHH
Q 014171          276 QFDAIDVD-KNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAAT  334 (429)
Q Consensus       276 ~F~~~D~~-~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~  334 (429)
                      .|..+|.| +||+|+..|+..+...   ..+.+.=+...+...|.|+||.|++.||...+
T Consensus        82 ~F~~LD~n~~D~~L~~~EL~~l~~~---L~~~e~C~~~F~~~CD~n~D~~Is~~EW~~Cf  138 (151)
T d1sraa_          82 QFGQLDQHPIDGYLSHTELAPLRAP---LIPMEHCTTRFFETCDLDNDKYIALDEWAGCF  138 (151)
T ss_dssp             HHHHHCCTTCSSEECTTTTGGGGST---TSTTGGGHHHHHHHHCTTCSSSEEHHHHHHHT
T ss_pred             ehhhcCCCCCCCccCHHHHHHHHHh---hcCCchHHHHHHHHhcCCCCCcCCHHHHHHHc
Confidence            39999999 5999999999876422   23334447888999999999999999999754

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=95.11  E-value=0.0074  Score=51.89  Aligned_cols=28  Identities=25%  Similarity=0.373  Sum_probs=22.8

Q ss_pred             CeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           87 LVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        87 i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ++|+|+.|.||+++   +++.+-|+||+.+.
T Consensus       185 l~HgD~~~~Nil~~---~~~~~~lIDwe~a~  212 (263)
T d1j7la_         185 FSHGDLGDSNIFVK---DGKVSGFIDLGRSG  212 (263)
T ss_dssp             EECSCCCTTSEEEE---TTEEEEECCCTTCE
T ss_pred             EEEeeccCcceeec---CCceEEEeechhcc
Confidence            78999999999998   34445699998765

>d1j7qa_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=94.84  E-value=0.044  Score=34.80  Aligned_cols=73  Identities=15%  Similarity=0.161  Sum_probs=59.4

Q ss_pred             ccchHHHhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhc-CCC-CCcccHHHHHHHHhhh
Q 014171          264 TLDDEELADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAID-CNT-DGLVDFSEFVAATLHV  337 (429)
Q Consensus       264 ~~~~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d-~~~-~g~I~~~eF~~~~~~~  337 (429)
                      .+.+++..+..++|+.||.|....-...+-...|.+ +|...+..+.+.++.+.- +.+ ...|--+||+..++..
T Consensus         7 algpeekdecmkifdifdrnaeniapvsdtmdmltk-lgqtytkreteaimkeargpkgdkknigpeewltlcskw   81 (86)
T d1j7qa_           7 ALGPEEKDECMKIFDIFDRNAENIAPVSDTMDMLTK-LGQTYTKRETEAIMKEARGPKGDKKNIGPEEWLTLCSKW   81 (86)
T ss_dssp             CCSSTHHHHHHHHHHHHSTTTTSCBCHHHHHHHHHH-TSCCCSHHHHHHHHHHHHCSSCSSCCBCTTHHHHHHHHH
T ss_pred             ccCchhHHHHHHHHHHHhccccccCCcchHHHHHHH-hhhHHhHHHHHHHHHHhcCCCCccccCCHHHHHHHHHHH
Confidence            456788888999999999999998889998888966 999999999999998753 222 2348889999887654

>d1h8ba_ a.39.1.7 (A:) alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: alpha-Actinin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.93  E-value=0.039  Score=36.59  Aligned_cols=58  Identities=17%  Similarity=0.208  Sum_probs=46.9

Q ss_pred             HHHHHHhccccCCCCCccCHHHHHhhhcCCCCHHHHHHHhCC-----CCCCcccHHHHHHHHHhc
Q 014171          350 LRSQAAFEKFDIDRDGFITPEELRMHTGLKGSIDPLLEEADI-----DKDGRISLSEFRRLLRTA  409 (429)
Q Consensus       350 ~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~~~~~~~~~d~-----~~dg~i~~~ef~~~~~~~  409 (429)
                      +.+.++|+.+ .++..+||.+||++.|... +++.++..+-.     -..|..+|..|.+.+-+.
T Consensus         8 Eqv~~aFr~l-A~~KpyVT~~dL~~~L~pe-qaeyc~~~M~~y~~~~~~~~ayDY~sF~~~l~ge   70 (73)
T d1h8ba_           8 EQVIASFRIL-ASDKPYILAEELRRELPPD-QAQYCIKRMPAYSGPGSVPGALDYAAFSSALYGE   70 (73)
T ss_dssp             HHHHHHHHHH-TTSCSSBCHHHHHHHSCHH-HHHHHHHHSCSCCCSSCCTTCBCHHHHHHHHTCC
T ss_pred             HHHHHHHHHH-hCCCCeeCHHHHHhhcCHH-HHHHHHHHCcccCCCCCCCCcccHHHHHHHHhcc
Confidence            5688999999 5779999999999998766 48888888743     246789999999887554

>d2pula1 d.144.1.6 (A:5-396) Methylthioribose kinase MtnK {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Methylthioribose kinase MtnK
species: Bacillus subtilis [TaxId: 1423]

Probab=93.47  E-value=0.045  Score=50.06  Aligned_cols=28  Identities=18%  Similarity=0.274  Sum_probs=23.7

Q ss_pred             CCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           86 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        86 ~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      .++|||++|.||+++    .+.++++||..|.
T Consensus       224 ~LiHGDl~~gNIlv~----~~~~~vID~E~a~  251 (392)
T d2pula1         224 TLIHGDLHTGSIFAS----EHETKVIDPEFAF  251 (392)
T ss_dssp             EEECSCCCGGGEEEC----SSCEEECCCTTCE
T ss_pred             ceeccCCcCCceeEc----CCceEEechhhcc
Confidence            589999999999998    3458999998764

>d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.11  E-value=0.04  Score=39.12  Aligned_cols=62  Identities=16%  Similarity=0.124  Sum_probs=47.9

Q ss_pred             HHHHHhccccCCCCCccCHHHHHhhhcCCC-C-------HHHHHHHhCCCC----CCcccHHHHHHHHHhccccC
Q 014171          351 RSQAAFEKFDIDRDGFITPEELRMHTGLKG-S-------IDPLLEEADIDK----DGRISLSEFRRLLRTASISS  413 (429)
Q Consensus       351 ~l~~~F~~~D~~~~G~I~~~el~~~~~~~~-~-------~~~~~~~~d~~~----dg~i~~~ef~~~~~~~~~~~  413 (429)
                      .+..+|+.+-. +.+.+|.++|.++|.... +       +..++..+..+.    .|.++++.|...|.+..++.
T Consensus         9 ei~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~ii~~~e~~~~~~~~~~ls~~gF~~fL~S~~N~i   82 (94)
T d1qasa1           9 EIDRAFEEAAG-SAETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLSADGNA   82 (94)
T ss_dssp             HHHHHHHHHHT-TSSSCBHHHHHHHHHHTSCCTTCSHHHHHHHHHHHCCCHHHHHTTBCCHHHHHHHHHSSTTBS
T ss_pred             HHHHHHHHHhC-CCCccCHHHHHHHHHHHcCCccCCHHHHHHHHHHHcccHhhhhcCCcCHHHHHHHHcCcccCC
Confidence            46778988854 457899999999997643 2       677888887653    47799999999998776543

>d1qasa1 a.39.1.7 (A:205-298) Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.06  E-value=0.051  Score=38.51  Aligned_cols=64  Identities=11%  Similarity=0.164  Sum_probs=49.0

Q ss_pred             hhhccccccCCCCCCcccHHHHHHHHHhhCCC-CccHHHHHHHHHHhcCCC----CCcccHHHHHHHHhh
Q 014171          272 DLRDQFDAIDVDKNGSISLEEMRQALAKDLPW-KLKESRVLEILQAIDCNT----DGLVDFSEFVAATLH  336 (429)
Q Consensus       272 ~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~-~~~~~~~~~l~~~~d~~~----~g~I~~~eF~~~~~~  336 (429)
                      ++..+|..+-. +.+.++.++|...|....+. ..+...+..++..+.++.    .|.++++.|...+..
T Consensus         9 ei~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~ii~~~e~~~~~~~~~~ls~~gF~~fL~S   77 (94)
T d1qasa1           9 EIDRAFEEAAG-SAETLSVERLVTFLQHQQREEEAGPALALSLIERYEPSETAKAQRQMTKDGFLMYLLS   77 (94)
T ss_dssp             HHHHHHHHHHT-TSSSCBHHHHHHHHHHTSCCTTCSHHHHHHHHHHHCCCHHHHHTTBCCHHHHHHHHHS
T ss_pred             HHHHHHHHHhC-CCCccCHHHHHHHHHHHcCCccCCHHHHHHHHHHHcccHhhhhcCCcCHHHHHHHHcC
Confidence            45566777744 44689999999999877765 467788999999998763    477999999876543

>d2cclb1 a.139.1.1 (B:1-59) Endo-1,4-beta-xylanase Y {Clostridium thermocellum [TaxId: 1515]}

class: All alpha proteins
fold: Type I dockerin domain
superfamily: Type I dockerin domain
family: Type I dockerin domain
domain: Endo-1,4-beta-xylanase Y
species: Clostridium thermocellum [TaxId: 1515]

Probab=91.82  E-value=0.28  Score=31.09  Aligned_cols=51  Identities=16%  Similarity=0.259  Sum_probs=39.7

Q ss_pred             CCCCCCcccHHHHHHHHHhhCCCC-ccHHHHHHHHHHhcCCCCCcccHHHHHHHHh
Q 014171          281 DVDKNGSISLEEMRQALAKDLPWK-LKESRVLEILQAIDCNTDGLVDFSEFVAATL  335 (429)
Q Consensus       281 D~~~~G~i~~~el~~~l~~~~~~~-~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~  335 (429)
                      |.|+||.++..++.......++.. +++.    -+.+.|.|++|.|+..+......
T Consensus         2 DvN~Dg~vni~D~~~l~~~il~~~~~~~~----~~~aaDvn~Dg~i~i~D~~~l~~   53 (59)
T d2cclb1           2 DVNGDGTINSTDLTMLKRSVLRAITLTDD----AKARADVDKNGSINAADVLLLSR   53 (59)
T ss_dssp             CTTCSSSCCHHHHHHHHHHHTTSSCCCHH----HHHHHCTTCSSCCSHHHHHHHHH
T ss_pred             CCCCCCCCcHHHHHHHHHHHhCCCCCChh----hhhccccCCCCCCCHHHHHHHHH
Confidence            789999999999988876666654 3332    35678999999999999876543

>d2cclb1 a.139.1.1 (B:1-59) Endo-1,4-beta-xylanase Y {Clostridium thermocellum [TaxId: 1515]}

class: All alpha proteins
fold: Type I dockerin domain
superfamily: Type I dockerin domain
family: Type I dockerin domain
domain: Endo-1,4-beta-xylanase Y
species: Clostridium thermocellum [TaxId: 1515]

Probab=90.82  E-value=0.18  Score=32.09  Aligned_cols=51  Identities=20%  Similarity=0.324  Sum_probs=33.0

Q ss_pred             cCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhh
Q 014171          318 DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHT  376 (429)
Q Consensus       318 d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~  376 (429)
                      |.|.+|.|+..+...+.........-..        ..|...|.|+||.|+..++..+.
T Consensus         2 DvN~Dg~vni~D~~~l~~~il~~~~~~~--------~~~~aaDvn~Dg~i~i~D~~~l~   52 (59)
T d2cclb1           2 DVNGDGTINSTDLTMLKRSVLRAITLTD--------DAKARADVDKNGSINAADVLLLS   52 (59)
T ss_dssp             CTTCSSSCCHHHHHHHHHHHTTSSCCCH--------HHHHHHCTTCSSCCSHHHHHHHH
T ss_pred             CCCCCCCCcHHHHHHHHHHHhCCCCCCh--------hhhhccccCCCCCCCHHHHHHHH
Confidence            6788888888888776554433322111        13666788888888887776544

>d2ppqa1 d.144.1.6 (A:5-320) Homoserine kinase ThrB {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Homoserine kinase ThrB
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=89.58  E-value=0.046  Score=48.17  Aligned_cols=30  Identities=27%  Similarity=0.425  Sum_probs=24.7

Q ss_pred             CCCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           85 HGLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        85 ~~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      .|++|+|+.++|++++   .+...-++||+.+.
T Consensus       183 ~giIHgDl~~dNvl~~---~~~v~gvIDF~~~~  212 (316)
T d2ppqa1         183 AGVIHADLFQDNVFFL---GDELSGLIDFYFAC  212 (316)
T ss_dssp             EEEECSCCCGGGEEEE---TTEEEEECCCTTCE
T ss_pred             cccccCCcchhhhhcc---cccceeEecccccc
Confidence            4799999999999998   34455799999775

>d1pula1 a.39.1.11 (A:18-120) Hypothetical protein c32e8.3 {Caenorhabditis elegans [TaxId: 6239]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: p25-alpha
domain: Hypothetical protein c32e8.3
species: Caenorhabditis elegans [TaxId: 6239]

Probab=87.67  E-value=0.89  Score=32.18  Aligned_cols=73  Identities=11%  Similarity=0.072  Sum_probs=53.0

Q ss_pred             hHHHhhhhccccccCCCCCCcccHHHHHHHHHh--hC-CCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhhhhh
Q 014171          267 DEELADLRDQFDAIDVDKNGSISLEEMRQALAK--DL-PWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHVHQL  340 (429)
Q Consensus       267 ~~~~~~l~~~F~~~D~~~~G~i~~~el~~~l~~--~~-~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~~~~  340 (429)
                      ..+++...+.|..|-.-..-.++-..|..++..  .+ |...+..+++-+|..+-..+ .+|+|++|..++..+...
T Consensus         4 ~~~l~~~F~aF~~FG~~~~~em~~~~f~Kl~kdc~lid~K~~T~tdvDIiF~K~k~k~-~ri~f~~F~~aL~~lA~~   79 (103)
T d1pula1           4 DADVKKRWDAFTKFGAATATEMTGKNFDKWLKDAGVLDNKAITGTMTGIAFSKVTGPK-KKATFDETKKVLAFVAED   79 (103)
T ss_dssp             HHHHHHHHHHHHHHTCSSSSCCCHHHHHHHHHHHTSCCSSSSCHHHHHHHHHHHTCSS-SCCCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCcCCCHHHHHHHHHHcCCCcCCCCCccchhhhhHhhcCCC-CCcCHHHHHHHHHHHHHH
Confidence            345566666677765333336899999999966  45 35689999999999986554 569999999887765443

>d1dava_ a.139.1.1 (A:) Cellulosome endoglucanase SS {Clostridium thermocellum [TaxId: 1515]}

class: All alpha proteins
fold: Type I dockerin domain
superfamily: Type I dockerin domain
family: Type I dockerin domain
domain: Cellulosome endoglucanase SS
species: Clostridium thermocellum [TaxId: 1515]

Probab=87.57  E-value=0.27  Score=32.50  Aligned_cols=49  Identities=24%  Similarity=0.296  Sum_probs=27.7

Q ss_pred             cCCCCCcccHHHHHHHHhhhhhhcccccHHHHHHHHHHhccccCCCCCccCHHHHHhhh
Q 014171          318 DCNTDGLVDFSEFVAATLHVHQLEEHDSEKWHLRSQAAFEKFDIDRDGFITPEELRMHT  376 (429)
Q Consensus       318 d~~~~g~I~~~eF~~~~~~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~I~~~el~~~~  376 (429)
                      |.|.||.|+..+...+...+.......          -+...|.|+||.|+..++..+.
T Consensus         8 DvN~DG~Vd~~D~~~~~~~i~~~~~~~----------~~~~aDvn~DG~Id~~D~~~l~   56 (71)
T d1dava_           8 DVNDDGKVNSTDAVALKRYVLRSGISI----------NTDNADLNEDGRVNSTDLGILK   56 (71)
T ss_dssp             CSSSSSBSSGGGHHHHHHHHHCSCSCC----------CGGGTCSSSSSSCSSHHHHHHH
T ss_pred             ccCCCCCCcHHHHHHHHHHHcCCCCcC----------CCcceecCCCCCcCHHHHHHHH
Confidence            667788888877765544433221111          1334577777777766665443

>d1h8ba_ a.39.1.7 (A:) alpha-Actinin {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: EF-hand modules in multidomain proteins
domain: alpha-Actinin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.36  E-value=0.4  Score=31.51  Aligned_cols=57  Identities=18%  Similarity=0.321  Sum_probs=42.4

Q ss_pred             HhhhhccccccCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcC----C-CCCcccHHHHHHHHh
Q 014171          270 LADLRDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDC----N-TDGLVDFSEFVAATL  335 (429)
Q Consensus       270 ~~~l~~~F~~~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~----~-~~g~I~~~eF~~~~~  335 (429)
                      .+++.+.|+.+ .++..+|+.+||...|        +.++++-+.+.+-+    + ..|..+|..|...+.
T Consensus         7 aEqv~~aFr~l-A~~KpyVT~~dL~~~L--------~peqaeyc~~~M~~y~~~~~~~~ayDY~sF~~~l~   68 (73)
T d1h8ba_           7 AEQVIASFRIL-ASDKPYILAEELRREL--------PPDQAQYCIKRMPAYSGPGSVPGALDYAAFSSALY   68 (73)
T ss_dssp             HHHHHHHHHHH-TTSCSSBCHHHHHHHS--------CHHHHHHHHHHSCSCCCSSCCTTCBCHHHHHHHHT
T ss_pred             HHHHHHHHHHH-hCCCCeeCHHHHHhhc--------CHHHHHHHHHHCcccCCCCCCCCcccHHHHHHHHh
Confidence            35677889988 5679999999998776        34567777777643    2 366799999987654

>d1dava_ a.139.1.1 (A:) Cellulosome endoglucanase SS {Clostridium thermocellum [TaxId: 1515]}

class: All alpha proteins
fold: Type I dockerin domain
superfamily: Type I dockerin domain
family: Type I dockerin domain
domain: Cellulosome endoglucanase SS
species: Clostridium thermocellum [TaxId: 1515]

Probab=85.84  E-value=0.16  Score=33.71  Aligned_cols=53  Identities=17%  Similarity=0.129  Sum_probs=38.7

Q ss_pred             cCCCCCCcccHHHHHHHHHhhCCCCccHHHHHHHHHHhcCCCCCcccHHHHHHHHhhh
Q 014171          280 IDVDKNGSISLEEMRQALAKDLPWKLKESRVLEILQAIDCNTDGLVDFSEFVAATLHV  337 (429)
Q Consensus       280 ~D~~~~G~i~~~el~~~l~~~~~~~~~~~~~~~l~~~~d~~~~g~I~~~eF~~~~~~~  337 (429)
                      -|.|+||.++..++..++...++.. +..+    ....|.|+||.|+..++......+
T Consensus         7 GDvN~DG~Vd~~D~~~~~~~i~~~~-~~~~----~~~aDvn~DG~Id~~D~~~l~~~i   59 (71)
T d1dava_           7 GDVNDDGKVNSTDAVALKRYVLRSG-ISIN----TDNADLNEDGRVNSTDLGILKRYI   59 (71)
T ss_dssp             SCSSSSSBSSGGGHHHHHHHHHCSC-SCCC----GGGTCSSSSSSCSSHHHHHHHHHT
T ss_pred             eccCCCCCCcHHHHHHHHHHHcCCC-CcCC----CcceecCCCCCcCHHHHHHHHHHH
Confidence            3889999999999888876555533 2111    235799999999999998655443

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=82.62  E-value=0.21  Score=41.97  Aligned_cols=28  Identities=18%  Similarity=0.149  Sum_probs=23.0

Q ss_pred             CeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           87 LVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        87 i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      ++|+|+.|.||+++   .+..+-|+||+.+.
T Consensus       177 liHgD~~~~Nvl~~---~~~~~~iID~~~~~  204 (255)
T d1nd4a_         177 VTHGDACLPNIMVE---NGRFSGFIDCGRLG  204 (255)
T ss_dssp             EECSSCCGGGEEEE---TTEEEEECCCTTCE
T ss_pred             EEeCCCCCcceEEe---CCceEEEEEchhcc
Confidence            79999999999998   34446799998764

>d1zyla1 d.144.1.6 (A:4-328) RdoA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: RdoA
species: Escherichia coli [TaxId: 562]

Probab=80.86  E-value=0.36  Score=42.41  Aligned_cols=27  Identities=22%  Similarity=0.272  Sum_probs=22.0

Q ss_pred             CCeecCCCCCcEEEeecCCCCCEEEeecccce
Q 014171           86 GLVHRDMKPENFLFKSAKEDSSLKATDFGLSD  117 (429)
Q Consensus        86 ~i~H~dikp~Nil~~~~~~~~~~kL~Dfg~a~  117 (429)
                      +++|+|+.|.||+++    ++ ..++||+.++
T Consensus       193 ~liHgDlh~~NvL~~----~~-~~~IDFdd~~  219 (325)
T d1zyla1         193 LRLHGDCHAGNILWR----DG-PMFVDLDDAR  219 (325)
T ss_dssp             EECCSSCSGGGEEES----SS-EEECCCTTCC
T ss_pred             eeecCCCCcccEEEe----CC-ceEEechhcc
Confidence            589999999999997    23 3589998765

>d1j7qa_ a.39.1.5 (A:) Calcium vector protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}

class: All alpha proteins
fold: EF Hand-like
superfamily: EF-hand
family: Calmodulin-like
domain: Calcium vector protein
species: Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]

Probab=80.47  E-value=2.2  Score=26.71  Aligned_cols=58  Identities=17%  Similarity=0.211  Sum_probs=46.1

Q ss_pred             HHHHHHHhccccCCCCCccCHHHHHhhhcCCCC------HHHHHHHh-CCCCCC-cccHHHHHHHH
Q 014171          349 HLRSQAAFEKFDIDRDGFITPEELRMHTGLKGS------IDPLLEEA-DIDKDG-RISLSEFRRLL  406 (429)
Q Consensus       349 ~~~l~~~F~~~D~~~~G~I~~~el~~~~~~~~~------~~~~~~~~-d~~~dg-~i~~~ef~~~~  406 (429)
                      ..+..++|..||.|..+.-...+-..++..+|.      .+.++++. ...||. .|.-+||..+-
T Consensus        13 kdecmkifdifdrnaeniapvsdtmdmltklgqtytkreteaimkeargpkgdkknigpeewltlc   78 (86)
T d1j7qa_          13 KDECMKIFDIFDRNAENIAPVSDTMDMLTKLGQTYTKRETEAIMKEARGPKGDKKNIGPEEWLTLC   78 (86)
T ss_dssp             HHHHHHHHHHHSTTTTSCBCHHHHHHHHHHTSCCCSHHHHHHHHHHHHCSSCSSCCBCTTHHHHHH
T ss_pred             HHHHHHHHHHHhccccccCCcchHHHHHHHhhhHHhHHHHHHHHHHhcCCCCccccCCHHHHHHHH
Confidence            356789999999999999999999999998885      67788876 344444 48889988754